Query psy17917
Match_columns 342
No_of_seqs 282 out of 1343
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 17:26:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 9.1E-49 3.1E-53 353.4 17.1 295 18-313 31-490 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 8.3E-47 2.8E-51 340.3 20.9 296 17-314 38-481 (500)
3 3uon_A Human M2 muscarinic ace 100.0 1.8E-46 6.1E-51 335.9 19.6 299 15-315 19-463 (467)
4 3vw7_A Proteinase-activated re 100.0 2.5E-46 8.6E-51 336.4 19.0 302 14-315 15-470 (484)
5 2z73_A Rhodopsin; visual pigme 100.0 8.7E-45 3E-49 323.1 28.6 291 18-309 33-331 (448)
6 1u19_A Rhodopsin; G protein-co 100.0 1.7E-45 5.9E-50 317.2 22.6 283 18-314 37-328 (349)
7 2ks9_A Substance-P receptor; w 100.0 1.1E-44 3.9E-49 313.9 26.9 282 19-313 32-325 (364)
8 4amj_A Beta-1 adrenergic recep 100.0 1.6E-45 5.5E-50 312.8 20.0 291 16-314 8-305 (315)
9 4eiy_A Adenosine receptor A2A/ 100.0 1.5E-45 5.2E-50 328.1 20.7 300 14-316 26-432 (447)
10 3eml_A Human adenosine A2A rec 100.0 3.6E-45 1.2E-49 329.2 22.2 300 14-316 16-473 (488)
11 4dkl_A MU-type opioid receptor 100.0 9.7E-46 3.3E-50 330.8 17.9 295 14-311 12-457 (464)
12 3v2y_A Sphingosine 1-phosphate 100.0 3.2E-45 1.1E-49 331.2 20.4 289 19-314 63-497 (520)
13 3rze_A Histamine H1 receptor, 100.0 5.2E-45 1.8E-49 325.0 18.8 294 18-314 7-447 (452)
14 3pbl_A D(3) dopamine receptor, 100.0 8.6E-45 3E-49 326.1 15.6 289 18-314 37-476 (481)
15 3sn6_R Lysozyme, beta-2 adrene 100.0 6.2E-44 2.1E-48 322.7 21.2 299 15-315 178-496 (514)
16 3odu_A C-X-C chemokine recepto 100.0 5.8E-45 2E-49 329.0 13.4 297 15-315 44-498 (502)
17 4ea3_A Fusion protein of nocic 100.0 1.1E-43 3.9E-48 314.4 20.3 284 15-314 121-414 (434)
18 2lnl_A C-X-C chemokine recepto 100.0 1.4E-42 4.8E-47 292.1 21.7 272 15-311 7-295 (296)
19 2koe_A Human cannabinoid recep 98.7 1.7E-09 6E-14 60.1 0.5 37 275-311 3-39 (40)
20 1hll_A Alpha-2A adrenergic rec 98.5 1.9E-08 6.6E-13 52.7 0.4 30 105-134 2-31 (32)
21 2ki9_A Cannabinoid receptor 2; 97.9 4.4E-06 1.5E-10 43.7 1.5 29 238-266 1-29 (33)
22 2lot_A Apelin receptor; membra 96.1 0.00022 7.4E-09 42.9 -2.8 30 21-50 30-59 (64)
23 2z73_A Rhodopsin; visual pigme 70.8 37 0.0013 29.1 10.5 34 16-49 34-67 (448)
24 2ket_A Cathelicidin-6; antimic 53.6 11 0.00036 17.0 1.9 13 298-310 4-16 (27)
25 4eiy_A Adenosine receptor A2A/ 51.1 1.1E+02 0.0038 25.8 13.3 31 280-310 400-430 (447)
26 2rdd_B UPF0092 membrane protei 48.1 23 0.0008 18.3 3.1 18 193-210 7-25 (37)
27 3eml_A Human adenosine A2A rec 41.8 1.7E+02 0.0056 25.1 13.3 43 274-316 435-477 (488)
28 3v2y_A Sphingosine 1-phosphate 37.4 2.1E+02 0.0072 25.0 10.2 44 23-68 64-107 (520)
29 3sn6_R Lysozyme, beta-2 adrene 34.2 2.3E+02 0.008 24.6 10.2 33 20-52 180-212 (514)
30 3arc_I Photosystem II reaction 22.7 90 0.0031 16.1 2.7 16 22-37 11-26 (38)
31 4grv_A Neurotensin receptor ty 21.4 1.2E+02 0.0041 26.5 5.1 36 274-309 455-490 (510)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=9.1e-49 Score=353.41 Aligned_cols=295 Identities=19% Similarity=0.304 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccc---cchhhHHHhHhHHHHHHHhhhhhhhhHHHhh--ccccccccch
Q psy17917 18 TLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIR---NVAAAFIVSLCIADFFFCLLVIPFSTTRFYF--KTWIHGKFLC 92 (342)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~---~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~--~~~~~~~~~C 92 (342)
...+..+++.+++++|++||+++++++.+++++| +++|+|++|||++|++.+++.+|+.+..... +.|.+|+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 4567778889999999999999999999877554 6889999999999999999999988877654 4699999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCcccc-----CCC
Q psy17917 93 TVVPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDL-----DTR 167 (342)
Q Consensus 93 ~~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~-----~~~ 167 (342)
++..++..++..+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+++. ++.... ...
T Consensus 111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~ 189 (510)
T 4grv_A 111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFT-MGLQNRSADGTHPG 189 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHH-EEEEECSSSSCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHh-hcccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998875 222211 112
Q ss_pred ccccccCCCCC-CchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccc-----------------------
Q psy17917 168 LLTCSILPDEN-GRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKI----------------------- 223 (342)
Q Consensus 168 ~~~C~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~----------------------- 223 (342)
...|...++.. ...+..+..++.+++|+++++++|..|++.++++.+.....+...
T Consensus 190 ~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (510)
T 4grv_A 190 GLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 269 (510)
T ss_dssp GEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECC
T ss_pred ccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccC
Confidence 33455444332 233445556778999999999999999999987543211100000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 224 -------------------------------------------------------------------------------- 223 (342)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (342)
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (510)
T 4grv_A 270 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 349 (510)
T ss_dssp CSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCC
Confidence
Q ss_pred --------------------------hh--------------hhhHHHHHhhhccchhHHHHHHHHHHHHHhhhhHHHHH
Q psy17917 224 --------------------------QS--------------KKDQKELKAKRNDMRITKMVLVIFLSFLTCYLPITVVK 263 (342)
Q Consensus 224 --------------------------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~ 263 (342)
+. ..+....++.++|+|+++++++++++|++||+|+++..
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~ 429 (510)
T 4grv_A 350 TNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRR 429 (510)
T ss_dssp HHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000111234578999999999999999999999887
Q ss_pred hccCCC---CCc--------hHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhh
Q psy17917 264 TVDSEV---HFP--------GLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKN 313 (342)
Q Consensus 264 ~~~~~~---~~~--------~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~ 313 (342)
++.... ... .+..+..+++++||++||+||.++|++||++++++++|+++
T Consensus 430 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~ 490 (510)
T 4grv_A 430 LMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACLCP 490 (510)
T ss_dssp HHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----------
T ss_pred HHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Confidence 764221 111 24557778999999999999999999999999999987654
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=8.3e-47 Score=340.25 Aligned_cols=296 Identities=21% Similarity=0.378 Sum_probs=231.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhhh
Q psy17917 17 VTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVVP 96 (342)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 96 (342)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|..+...+.+.|.++...|++..
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~ 117 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHH
Confidence 34556778899999999999999999999999999999999999999999999999999888888889999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCCC
Q psy17917 97 FIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILPD 176 (342)
Q Consensus 97 ~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 176 (342)
++..++..+|++++++||+|||+||++|++|++..+++++..+++++|+++++.++++....+... .......|.....
T Consensus 118 ~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~~ 196 (500)
T 2rh1_A 118 SIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEET 196 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceeccccc
Confidence 999999999999999999999999999999999999999999999999999999864443223222 1222234443221
Q ss_pred ----CCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhcccc------------------------------
Q psy17917 177 ----ENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSK------------------------------ 222 (342)
Q Consensus 177 ----~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~------------------------------ 222 (342)
.....|.....++.+++|+++++++|..|++.++++.++.+..+..
T Consensus 197 ~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (500)
T 2rh1_A 197 CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLN 276 (500)
T ss_dssp CCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCccccc
Confidence 2234555666777889999999999999999998875541100000
Q ss_pred -------------c--------------hh----------------------------------h----------hh-H-
Q psy17917 223 -------------I--------------QS----------------------------------K----------KD-Q- 229 (342)
Q Consensus 223 -------------~--------------~~----------------------------------~----------~~-~- 229 (342)
. +. + .. +
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (500)
T 2rh1_A 277 AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 356 (500)
T ss_dssp HHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhh
Confidence 0 00 0 00 0
Q ss_pred --------------------------------------HHHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccCC---
Q psy17917 230 --------------------------------------KELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDSE--- 268 (342)
Q Consensus 230 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~--- 268 (342)
+..+..++|+|+++++++++++|++||+|+.+..++...
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~ 436 (500)
T 2rh1_A 357 LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN 436 (500)
T ss_dssp HHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 000012367899999999999999999999998776432
Q ss_pred CCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 269 VHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 269 ~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
.....+..+..++.++|+++||+||.+ |++||+++++++||++.+
T Consensus 437 ~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~~~ 481 (500)
T 2rh1_A 437 LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRRSS 481 (500)
T ss_dssp SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC----
T ss_pred cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhccC
Confidence 234457778899999999999999986 999999999999876554
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.8e-46 Score=335.88 Aligned_cols=299 Identities=19% Similarity=0.340 Sum_probs=238.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhh
Q psy17917 15 PDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTV 94 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 94 (342)
++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|.++...|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 98 (467)
T 3uon_A 19 KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDL 98 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhH
Confidence 33456678889999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccc--cCCCccccc
Q psy17917 95 VPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFD--LDTRLLTCS 172 (342)
Q Consensus 95 ~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~C~ 172 (342)
..++..++..+|.+++++||+|||++|++|++|+...+++++..+++++|+++++.++|+++. +..+. .......|.
T Consensus 99 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~C~ 177 (467)
T 3uon_A 99 WLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILF-WQFIVGVRTVEDGECY 177 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHSCCCCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhcccccCCCCCcce
Confidence 999999999999999999999999999999999999999999999999999999999988765 22221 223344576
Q ss_pred cCCCCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccch----------------------------
Q psy17917 173 ILPDENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQ---------------------------- 224 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~---------------------------- 224 (342)
..+. ....+.....++.+++|+++++++|..|++.++++.++.+.......
T Consensus 178 ~~~~-~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (467)
T 3uon_A 178 IQFF-SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLN 256 (467)
T ss_dssp CGGG-GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHH
T ss_pred eecC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCccc
Confidence 5443 23356666777889999999999999999999987653322100000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 225 -------------------------------------------------------------------------------- 224 (342)
Q Consensus 225 -------------------------------------------------------------------------------- 224 (342)
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (467)
T 3uon_A 257 AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 336 (467)
T ss_dssp HHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHH
T ss_pred ccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccch
Confidence
Q ss_pred ----------------hhhhHH-----------------HHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhcc---CC
Q psy17917 225 ----------------SKKDQK-----------------ELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVD---SE 268 (342)
Q Consensus 225 ----------------~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~---~~ 268 (342)
....+. ..+..++|+|+++++++++++|++||+|+.+..++. ..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~ 416 (467)
T 3uon_A 337 LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP 416 (467)
T ss_dssp HHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST
T ss_pred hhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 000000 000124688999999999999999999999987764 22
Q ss_pred CCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhhh
Q psy17917 269 VHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNRL 315 (342)
Q Consensus 269 ~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~~ 315 (342)
........+..++.++|+++||+||++++++||++++++++|++++.
T Consensus 417 ~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~~ 463 (467)
T 3uon_A 417 CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHYKNI 463 (467)
T ss_dssp TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC------
T ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhccCC
Confidence 23456778888999999999999999999999999999997766543
No 4
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-46 Score=336.38 Aligned_cols=302 Identities=17% Similarity=0.236 Sum_probs=218.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchh
Q psy17917 14 LPDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCT 93 (342)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~ 93 (342)
.++....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.++...+..+.....+.|.++...|+
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~ 94 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCR 94 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHh
Confidence 34455668888999999999999999999999999999999999999999999997654334444444458999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCcccccc
Q psy17917 94 VVPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSI 173 (342)
Q Consensus 94 ~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 173 (342)
+..++..++..+|.+++++||+|||+||++|++|+...+++++..+++++|+++++.++|+++..............|..
T Consensus 95 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~ 174 (484)
T 3vw7_A 95 FVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHD 174 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999988863322233444567876
Q ss_pred CCCCCC-ch----hHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccc-------------------------
Q psy17917 174 LPDENG-RS----SKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKI------------------------- 223 (342)
Q Consensus 174 ~~~~~~-~~----~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~------------------------- 223 (342)
.+.... .. +.....++.+++|+++++++|..|++.++++.++.+......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~ 254 (484)
T 3vw7_A 175 VLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKS 254 (484)
T ss_dssp SCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESS
T ss_pred cCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCC
Confidence 554332 11 334455778999999999999999999998774322100000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 224 -------------------------------------------------------------------------------- 223 (342)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (342)
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 334 (484)
T 3vw7_A 255 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 334 (484)
T ss_dssp SCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred cchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccchh
Confidence
Q ss_pred ----------------------hhhhhHH--------------HHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccC
Q psy17917 224 ----------------------QSKKDQK--------------ELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDS 267 (342)
Q Consensus 224 ----------------------~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~ 267 (342)
..+...+ ...+.++++|+++++++++++|++||+|+.+..++..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~ 414 (484)
T 3vw7_A 335 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHY 414 (484)
T ss_dssp HHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred hhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 0000000 0113455679999999999999999999999776542
Q ss_pred ----CCCCc----hHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhhh
Q psy17917 268 ----EVHFP----GLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNRL 315 (342)
Q Consensus 268 ----~~~~~----~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~~ 315 (342)
..... ....+..++.++|+++||+||+++|++||+++++++||++++.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~~~ 470 (484)
T 3vw7_A 415 SFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSD 470 (484)
T ss_dssp HTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC---------------
T ss_pred HHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhccCCC
Confidence 11221 3556788899999999999999999999999999998876553
No 5
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=8.7e-45 Score=323.12 Aligned_cols=291 Identities=27% Similarity=0.432 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhh-hhhhhHHHhhccccccccchhhhh
Q psy17917 18 TLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLV-IPFSTTRFYFKTWIHGKFLCTVVP 96 (342)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~-~~~~~~~~~~~~~~~~~~~C~~~~ 96 (342)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++. +|..+.....+.|.++...|++..
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 112 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYG 112 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHH
Confidence 4556778889999999999999999999999999999999999999999998764 788777777788999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCCC
Q psy17917 97 FIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILPD 176 (342)
Q Consensus 97 ~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 176 (342)
++..++..+|.+++++||+|||++|++|+++++..+++++..+++++|+++++++++.++. +..+..+.....|..+..
T Consensus 113 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~c~~~~~ 191 (448)
T 2z73_A 113 FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG-WGAYTLEGVLCNCSFDYI 191 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGT-SSCEEECTTSSSEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhc-eeeeeecCCceeEecccc
Confidence 9999999999999999999999999999999999999999999999999999999988876 555555556667766543
Q ss_pred CCC---chhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHHHHH
Q psy17917 177 ENG---RSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFLSFL 253 (342)
Q Consensus 177 ~~~---~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 253 (342)
... ..+.....++.+++|+++++++|..|++.++++.++.++.......+..++..+..++++|+++++++++++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~ 271 (448)
T 2z73_A 192 SRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFL 271 (448)
T ss_dssp CCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 322 23444556677899999999999999999999888776544333333333333445567899999999999999
Q ss_pred HhhhhHHHHHhccCC----CCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHh
Q psy17917 254 TCYLPITVVKTVDSE----VHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLM 309 (342)
Q Consensus 254 ~~~~P~~i~~~~~~~----~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~ 309 (342)
+||+|+.+..++... ........+..++..+|+++||+||++++++||++++++++
T Consensus 272 i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 272 LSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred HHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 999999887765322 12334566777899999999999999999999999999884
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.7e-45 Score=317.18 Aligned_cols=283 Identities=23% Similarity=0.436 Sum_probs=233.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhhhh
Q psy17917 18 TLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVVPF 97 (342)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 97 (342)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++...|..+.....+.|.+++..|++..+
T Consensus 37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 116 (349)
T 1u19_A 37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGF 116 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHH
Confidence 45577888899999999999999999999999999999999999999999999889988888888889999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCCCC
Q psy17917 98 IQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILPDE 177 (342)
Q Consensus 98 ~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 177 (342)
+..++..+|.+++++|++|||+||++|+++++ .+++++...++++|+++++.++|++.+ +..+..+.....|..++..
T Consensus 117 ~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~C~~~~~~ 194 (349)
T 1u19_A 117 FATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVG-WSRYIPEGMQCSCGIDYYT 194 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTT-SSCCEEETTTTEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHh-eeeeeccCCceeecccccC
Confidence 99999999999999999999999999999877 688889999999999999999998876 5555445555677665432
Q ss_pred -----CCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHHHH
Q psy17917 178 -----NGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFLSF 252 (342)
Q Consensus 178 -----~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 252 (342)
....+......+.+++|+++++++|..|++.++++.++.++ . .++.++++|.+++++++++.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~i~~~f 262 (349)
T 1u19_A 195 PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE-------S-----ATTQKAEKEVTRMVIIMVIAF 262 (349)
T ss_dssp CCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCS-------S-----SHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-------c-----hhhHHHHHHHHHHHHHHHHHH
Confidence 22344455567788999999999999999988776432111 0 012234558899999999999
Q ss_pred HHhhhhHHHHHhcc----CCCCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 253 LTCYLPITVVKTVD----SEVHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 253 ~~~~~P~~i~~~~~----~~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
++||+|+.+..++. ..........+..++.++|+++||+||++++++||+++++++||++++
T Consensus 263 ~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~~~ 328 (349)
T 1u19_A 263 LICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP 328 (349)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccCCC
Confidence 99999998876542 122233466677788899999999999999999999999999876543
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.1e-44 Score=313.92 Aligned_cols=282 Identities=19% Similarity=0.326 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhhhhh
Q psy17917 19 LKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVVPFI 98 (342)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 98 (342)
..+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++...|..+.....+.|..++..|++..++
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 111 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHH
Confidence 34557888999999999999999999999999999999999999999999988889888877788899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCCCCC
Q psy17917 99 QYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILPDEN 178 (342)
Q Consensus 99 ~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 178 (342)
..++..+|.+++++||+|||+||++|++++ .++++....++++|+++++.++|... +...........|..++...
T Consensus 112 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~--~~~~~~~~~~~~C~~~~~~~ 187 (364)
T 2ks9_A 112 PIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGY--YSTTETMPSRVVCMIEWPEH 187 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTT--TSCCCBCTTCSSBCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHH--HhhheecCCCCEEeecCCCc
Confidence 999999999999999999999999999876 47788888999999999999988765 33344445556687654432
Q ss_pred C-----chhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHHHHH
Q psy17917 179 G-----RSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFLSFL 253 (342)
Q Consensus 179 ~-----~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 253 (342)
. ..+.....++.+++|+++++++|..|.+.+++++++.+.. + ...++.++++|++++++++++.|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~------~---~~~~~~~~~~k~~~~~~~v~~~f~ 258 (364)
T 2ks9_A 188 PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSS------D---RYHEQVSAKRKVVKMMIVVVCTFA 258 (364)
T ss_dssp CTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSS------S---CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc------h---hhhhhHHhhhhHHHHHHHHHHHHH
Confidence 1 2345556677889999999999999999887653321110 0 001223456699999999999999
Q ss_pred HhhhhHHHHHhccC---C----CCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhh
Q psy17917 254 TCYLPITVVKTVDS---E----VHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKN 313 (342)
Q Consensus 254 ~~~~P~~i~~~~~~---~----~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~ 313 (342)
+||+|+.+..+... . ........+..++.++|+++||+||++++++||++++++++|+++
T Consensus 259 ~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 259 ICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp HHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 99999998776431 1 112335667778999999999999999999999999999976543
No 8
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=1.6e-45 Score=312.84 Aligned_cols=291 Identities=24% Similarity=0.402 Sum_probs=231.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhh
Q psy17917 16 DVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVV 95 (342)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 95 (342)
+....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+.....+.|.+++..|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 87 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHH
Confidence 34556788889999999999999999999999999999999999999999999988999988888888999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCC
Q psy17917 96 PFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILP 175 (342)
Q Consensus 96 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 175 (342)
.++..++..+|.++++++|+|||+||++|++|++..+++++...++++|+.+++.+.++....+. ...+.....|..++
T Consensus 88 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~-~~~~~~~~~c~~~~ 166 (315)
T 4amj_A 88 TSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWW-RDEDPQALKCYQDP 166 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCCSHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhc-cccCCCcccccccc
Confidence 99999999999999999999999999999999998999999999999999999999877765222 22223334454432
Q ss_pred C----CCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHHH
Q psy17917 176 D----ENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFLS 251 (342)
Q Consensus 176 ~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (342)
. .....+......+.+++|+++++++|..+++.++++.++.++.... +...+..++++|.++++.+++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~k~~~~~~~~~~~ 240 (315)
T 4amj_A 167 GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKR------KTSRVMLMREHKALKTLGIIMGV 240 (315)
T ss_dssp TCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc------ccchhhhhhhhhHHHHHHHHHHH
Confidence 2 2334555666777889999999999999999999887765433221 11122334567999999999999
Q ss_pred HHHhhhhHHHHHhcc---CCCCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 252 FLTCYLPITVVKTVD---SEVHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 252 f~~~~~P~~i~~~~~---~~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
|++||+|+.+..+.. ..........+..++.++|+++||++|+ ++++||++++++++|++++
T Consensus 241 f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~~ 305 (315)
T 4amj_A 241 FTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRKA 305 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCcc
Confidence 999999999887753 3333445677778899999999999999 9999999999999876543
No 9
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.5e-45 Score=328.06 Aligned_cols=300 Identities=20% Similarity=0.329 Sum_probs=232.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchh
Q psy17917 14 LPDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCT 93 (342)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~ 93 (342)
.+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+... ..|..+...|+
T Consensus 26 ~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~ 103 (447)
T 4eiy_A 26 PPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCL 103 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHH
Confidence 3445566888899999999999999999999999999999999999999999999988888777633 36677889999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCC----Ccc
Q psy17917 94 VVPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDT----RLL 169 (342)
Q Consensus 94 ~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~ 169 (342)
+..++..++..+|.+++++||+|||++|++|++|++..+++++..+++++|+++++.++|+.++ +....... ...
T Consensus 104 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (447)
T 4eiy_A 104 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQ 182 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGT-CSSTTSCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhhe-eccccccCccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988876 43332221 112
Q ss_pred ccccCC-------CCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccch------------------
Q psy17917 170 TCSILP-------DENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQ------------------ 224 (342)
Q Consensus 170 ~C~~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~------------------ 224 (342)
.|.... ......+.....++.+++|+++++++|..|++.++++.++.+.......
T Consensus 183 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (447)
T 4eiy_A 183 GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDA 262 (447)
T ss_dssp TCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred cccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhcc
Confidence 333221 1111122222345567899999999999999999998766543111000
Q ss_pred -------------------------------------------------------------------------hhhhHHH
Q psy17917 225 -------------------------------------------------------------------------SKKDQKE 231 (342)
Q Consensus 225 -------------------------------------------------------------------------~~~~~~~ 231 (342)
++.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
T 4eiy_A 263 LTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERA 342 (447)
T ss_dssp HHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHH
T ss_pred chhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccch
Confidence 0001122
Q ss_pred HHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccC-----CCCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHH
Q psy17917 232 LKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDS-----EVHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKT 306 (342)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~-----~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~ 306 (342)
.+..++++|+++++++++++|++||+|+.+..++.. ......+..+..++.++|+++||+||++++++||+++++
T Consensus 343 ~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 422 (447)
T 4eiy_A 343 RSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 422 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHH
Confidence 234567889999999999999999999999876532 222345677888999999999999999999999999999
Q ss_pred HHhhhhhhhh
Q psy17917 307 VLMCEKNRLL 316 (342)
Q Consensus 307 ~~~~~~~~~~ 316 (342)
+++|++++..
T Consensus 423 ~~~~~~~r~~ 432 (447)
T 4eiy_A 423 IIRSHVLRQQ 432 (447)
T ss_dssp HHHHTC----
T ss_pred HHHHHHhccC
Confidence 9987665543
No 10
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3.6e-45 Score=329.15 Aligned_cols=300 Identities=20% Similarity=0.303 Sum_probs=234.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchh
Q psy17917 14 LPDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCT 93 (342)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~ 93 (342)
.+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.... .|..+...|+
T Consensus 16 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~ 93 (488)
T 3eml_A 16 PPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCL 93 (488)
T ss_dssp --CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHH
Confidence 34445668888999999999999999999999999999999999999999999999888987776443 6778889999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccC----CCcc
Q psy17917 94 VVPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLD----TRLL 169 (342)
Q Consensus 94 ~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~----~~~~ 169 (342)
+..++..++..+|.+++++||+|||++|++|++|++..+++++..+++++|++++++++|++++ +...... ....
T Consensus 94 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~~~~ 172 (488)
T 3eml_A 94 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQ 172 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGT-CCSSCC-------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhc-ccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988876 3333222 2223
Q ss_pred ccccCCC-------CCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccch------------------
Q psy17917 170 TCSILPD-------ENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQ------------------ 224 (342)
Q Consensus 170 ~C~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~------------------ 224 (342)
.|..... .....+..+..++.+++|+++++++|..|++.++++.++.+.......
T Consensus 173 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (488)
T 3eml_A 173 GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 252 (488)
T ss_dssp SSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETT
T ss_pred ccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceecccc
Confidence 4543321 111223334466788999999999999999999987655432110000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 225 -------------------------------------------------------------------------------- 224 (342)
Q Consensus 225 -------------------------------------------------------------------------------- 224 (342)
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (488)
T 3eml_A 253 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 332 (488)
T ss_dssp EEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHH
T ss_pred ccCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCC
Confidence
Q ss_pred --------------------------------------------hhhhHHHHHhhhccchhHHHHHHHHHHHHHhhhhHH
Q psy17917 225 --------------------------------------------SKKDQKELKAKRNDMRITKMVLVIFLSFLTCYLPIT 260 (342)
Q Consensus 225 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~ 260 (342)
........+..++++|+++++++++++|++||+|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~ 412 (488)
T 3eml_A 333 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLH 412 (488)
T ss_dssp HTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 000011122346788999999999999999999999
Q ss_pred HHHhccC-----CCCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhhhh
Q psy17917 261 VVKTVDS-----EVHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNRLL 316 (342)
Q Consensus 261 i~~~~~~-----~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~~~ 316 (342)
+..++.. ......+..+..++.++|+++||+||++++++||++++++++|+.++..
T Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~~ 473 (488)
T 3eml_A 413 IINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQ 473 (488)
T ss_dssp HHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcccccC
Confidence 9876532 1233457778889999999999999999999999999999987665543
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=9.7e-46 Score=330.82 Aligned_cols=295 Identities=21% Similarity=0.421 Sum_probs=233.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchh
Q psy17917 14 LPDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCT 93 (342)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~ 93 (342)
.......+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++. +|..+.....+.|.++...|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~ 90 (464)
T 4dkl_A 12 PSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCK 90 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhh
Confidence 3444567888899999999999999999999999999999999999999999999866 888888888889999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCcccccc
Q psy17917 94 VVPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSI 173 (342)
Q Consensus 94 ~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 173 (342)
+..++..++..+|.+++++||+|||+||++|++|++..+++++..+++++|+++++.++|.++. ...........|..
T Consensus 91 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~--~~~~~~~~~~~c~~ 168 (464)
T 4dkl_A 91 IVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFM--ATTKYRQGSIDCTL 168 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHS--BCCEEETTEEECCB
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHh--eeecccCCCceEEe
Confidence 9999999999999999999999999999999999999999999999999999999999988874 22333344556766
Q ss_pred CCCCCC----chhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchh------------------------
Q psy17917 174 LPDENG----RSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQS------------------------ 225 (342)
Q Consensus 174 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~------------------------ 225 (342)
...... ..+.....++.+++|+++++++|..|++.+++++++.+........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (464)
T 4dkl_A 169 TFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSP 248 (464)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSS
T ss_pred ecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCC
Confidence 554432 2344556677899999999999999999998766533221100000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 226 -------------------------------------------------------------------------------- 225 (342)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (342)
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (464)
T 4dkl_A 249 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 328 (464)
T ss_dssp CSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHH
T ss_pred ccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCccccccc
Confidence
Q ss_pred --------------------------hh-----------hHHHHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccCC
Q psy17917 226 --------------------------KK-----------DQKELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDSE 268 (342)
Q Consensus 226 --------------------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~ 268 (342)
.+ .....++.++|+|+++++++++++|++||+|+.+..++...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~ 408 (464)
T 4dkl_A 329 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKAL 408 (464)
T ss_dssp HHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 00 00001123556899999999999999999999988776422
Q ss_pred C---C---CchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhh
Q psy17917 269 V---H---FPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCE 311 (342)
Q Consensus 269 ~---~---~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~ 311 (342)
. . ......+..++.++|+++||+||+++|++||++++++++|+
T Consensus 409 ~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~~ 457 (464)
T 4dkl_A 409 ITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPT 457 (464)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC--
T ss_pred hcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhccc
Confidence 1 1 12245567779999999999999999999999999986544
No 12
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=3.2e-45 Score=331.19 Aligned_cols=289 Identities=17% Similarity=0.260 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhhhhh
Q psy17917 19 LKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVVPFI 98 (342)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 98 (342)
..+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.++...|..+.. ....|..+...|++..++
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHH
Confidence 3677889999999999999999999999999999999999999999999998888877665 456788889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccCCCCC
Q psy17917 99 QYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSILPDEN 178 (342)
Q Consensus 99 ~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 178 (342)
..++..+|++++++||+|||+||+ |++|+...+++++..+++++|++++++++|++++ +..+ .+...|...+...
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~---~~~~~C~~~~~~~ 216 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMG-WNCI---SALSSCSTVLPLY 216 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTT-CBCT---TCGGGBCSSSTTB
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHe-eccc---cCCCcccccCCcc
Confidence 999999999999999999999999 9999999999999999999999999999988876 4443 3445787665544
Q ss_pred CchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHH--hhcccc----------------------------------
Q psy17917 179 GRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRL--RRHTSK---------------------------------- 222 (342)
Q Consensus 179 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~--~~~~~~---------------------------------- 222 (342)
...+ ....++.+++|+++++++|..|++.++++.... ++....
T Consensus 217 ~~~~-~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~ 295 (520)
T 3v2y_A 217 HKHY-ILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELD 295 (520)
T ss_dssp BHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHH
T ss_pred chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhh
Confidence 4344 344556799999999999999999999876100 000000
Q ss_pred ----------------------------------------------------------------ch-h------------
Q psy17917 223 ----------------------------------------------------------------IQ-S------------ 225 (342)
Q Consensus 223 ----------------------------------------------------------------~~-~------------ 225 (342)
.. .
T Consensus 296 ~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 375 (520)
T 3v2y_A 296 KAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWD 375 (520)
T ss_dssp HHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHH
T ss_pred hHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchh
Confidence 00 0
Q ss_pred -------------hhhHHH---------------HHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccCCC-----CCc
Q psy17917 226 -------------KKDQKE---------------LKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDSEV-----HFP 272 (342)
Q Consensus 226 -------------~~~~~~---------------~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~~-----~~~ 272 (342)
+...+. .++.++++|+++++++++++|++||+|+.+..++.... ...
T Consensus 376 ~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~ 455 (520)
T 3v2y_A 376 EAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDIL 455 (520)
T ss_dssp HHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTT
T ss_pred hHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHH
Confidence 000000 00122578999999999999999999999988764221 223
Q ss_pred hHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 273 GLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 273 ~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
....+..++.++|+++||+||.+++++||++++++++|+...
T Consensus 456 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 497 (520)
T 3v2y_A 456 FRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLEV 497 (520)
T ss_dssp TSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhccc
Confidence 344567779999999999999999999999999999765444
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-45 Score=325.02 Aligned_cols=294 Identities=22% Similarity=0.341 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhhhhh
Q psy17917 18 TLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTVVPF 97 (342)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 97 (342)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|.++...|++..+
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 86 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLS 86 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHH
Confidence 34456678899999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccC---CCccccccC
Q psy17917 98 IQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLD---TRLLTCSIL 174 (342)
Q Consensus 98 ~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~~ 174 (342)
+..++..+|.+++++||+|||++|++|++|++..+++++..+++++|+++++.++|.+. +..+..+ .....|..+
T Consensus 87 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~--~~~~~~~~~~~~~~~C~~~ 164 (452)
T 3rze_A 87 MDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILG--WNHFMQQTSVRREDKCETD 164 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHC--CCC-------CCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHH--HHhcccccccCCCCeecCC
Confidence 99999999999999999999999999999999999999999999999999999888654 3332222 244567654
Q ss_pred CCCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchh-----------------------------
Q psy17917 175 PDENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQS----------------------------- 225 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~----------------------------- 225 (342)
... ...+..+..++.+++|+++++++|..|++.++++.++.+........
T Consensus 165 ~~~-~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (452)
T 3rze_A 165 FYD-VTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAA 243 (452)
T ss_dssp CTT-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHH
T ss_pred Ccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcc
Confidence 332 34466667778899999999999999999998875442211100000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 226 -------------------------------------------------------------------------------- 225 (342)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (342)
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (452)
T 3rze_A 244 KSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQ 323 (452)
T ss_dssp HHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHH
T ss_pred cccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhh
Confidence
Q ss_pred ------------------hhhH--------------HHHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhcc---CCCC
Q psy17917 226 ------------------KKDQ--------------KELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVD---SEVH 270 (342)
Q Consensus 226 ------------------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~---~~~~ 270 (342)
.... +..++.++|+|+++++++++++|++||+|+.+..++. ....
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~ 403 (452)
T 3rze_A 324 QKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCC 403 (452)
T ss_dssp TTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred hcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccc
Confidence 0000 0001234678999999999999999999999877653 3333
Q ss_pred CchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 271 FPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 271 ~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
......+..++.++|+++||+||++++++||++++++++|++++
T Consensus 404 ~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~ 447 (452)
T 3rze_A 404 NEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSGE 447 (452)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC----
T ss_pred cHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcccc
Confidence 45577788899999999999999999999999999999876644
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=8.6e-45 Score=326.14 Aligned_cols=289 Identities=21% Similarity=0.385 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhh-ccccccccchhhhh
Q psy17917 18 TLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYF-KTWIHGKFLCTVVP 96 (342)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~-~~~~~~~~~C~~~~ 96 (342)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+..... +.|.++...|++..
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 116 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFV 116 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHH
Confidence 34566778899999999999999999999999999999999999999999998999988876665 57899999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhheecccccc---cccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCcccccc
Q psy17917 97 FIQYSNVGVSLSCIAMITINRYIMIAHHQMY---NTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSI 173 (342)
Q Consensus 97 ~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~---~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 173 (342)
++..++..+|.+++++||+|||++|++|++| .+..+++++..+++++|+++++.++|+++. +.. ......|..
T Consensus 117 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~---~~~~~~C~~ 192 (481)
T 3pbl_A 117 TLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFG-FNT---TGDPTVCSI 192 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTT-TCC---CSSTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhe-ecc---cCCCCcccc
Confidence 9999999999999999999999999999998 567788999999999999999999998875 222 233445654
Q ss_pred CCCCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccch-----------------------------
Q psy17917 174 LPDENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQ----------------------------- 224 (342)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~----------------------------- 224 (342)
. ...+..+..++.+++|+++++++|..|++.++++.++.........
T Consensus 193 ~----~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (481)
T 3pbl_A 193 S----NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 268 (481)
T ss_dssp C----CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCH
T ss_pred c----CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCccc
Confidence 3 2346667778889999999999999999999986543111000000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 225 -------------------------------------------------------------------------------- 224 (342)
Q Consensus 225 -------------------------------------------------------------------------------- 224 (342)
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (481)
T 3pbl_A 269 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 348 (481)
T ss_dssp HHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccc
Confidence
Q ss_pred -----------------hhhhHHHHH-----------------hhhccchhHHHHHHHHHHHHHhhhhHHHHHhccCC--
Q psy17917 225 -----------------SKKDQKELK-----------------AKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDSE-- 268 (342)
Q Consensus 225 -----------------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~-- 268 (342)
...++...+ ..++++|+++++++++++|++||+|+.+..++...
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~ 428 (481)
T 3pbl_A 349 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ 428 (481)
T ss_dssp HHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred hhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 000000000 01247899999999999999999999998876432
Q ss_pred --CCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 269 --VHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 269 --~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
.....+..+..++.++|+++||+||++++++||++++++++|++++
T Consensus 429 ~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~ 476 (481)
T 3pbl_A 429 TCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGRPL 476 (481)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC----
T ss_pred cccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccCcH
Confidence 2334577788899999999999999999999999999999877654
No 15
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=6.2e-44 Score=322.68 Aligned_cols=299 Identities=21% Similarity=0.389 Sum_probs=234.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhh
Q psy17917 15 PDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTV 94 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 94 (342)
++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|.++...|++
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 257 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEF 257 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhh
Confidence 34455677888999999999999999999999999999999999999999999999999999888888899999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccC
Q psy17917 95 VPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSIL 174 (342)
Q Consensus 95 ~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 174 (342)
..++..++..+|.+++++||+|||++|++|++|+...+++++..+++++|+++++.++++....+..... .....|...
T Consensus 258 ~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~-~~~~~c~~~ 336 (514)
T 3sn6_R 258 WTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH-QEAINCYAE 336 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC----CHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceeccc-Ccccceeec
Confidence 9999999999999999999999999999999999989999999999999999999987666543333322 222233322
Q ss_pred C----CCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchh-------------hhhHHHHHhhhc
Q psy17917 175 P----DENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQS-------------KKDQKELKAKRN 237 (342)
Q Consensus 175 ~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 237 (342)
. ......+.....++.+++|+++++++|..|++.++++.++.+........ ...++..+..++
T Consensus 337 ~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (514)
T 3sn6_R 337 ETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLK 416 (514)
T ss_dssp SSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHH
Confidence 1 12344566677788899999999999999999999988776553322110 011122233456
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHhcc---CCCCCchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 238 DMRITKMVLVIFLSFLTCYLPITVVKTVD---SEVHFPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 238 ~~~~~~~~~~~~~~f~~~~~P~~i~~~~~---~~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
++|.++++++++++|++||+|+.+..++. ..........+..++.++|+++||+||+ ++++||+++++++||++++
T Consensus 417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~ 495 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSS 495 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccc
Confidence 78999999999999999999999877654 2223345677888899999999999999 9999999999999776544
Q ss_pred h
Q psy17917 315 L 315 (342)
Q Consensus 315 ~ 315 (342)
.
T Consensus 496 ~ 496 (514)
T 3sn6_R 496 L 496 (514)
T ss_dssp -
T ss_pred c
Confidence 3
No 16
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=5.8e-45 Score=328.98 Aligned_cols=297 Identities=19% Similarity=0.347 Sum_probs=233.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhh
Q psy17917 15 PDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTV 94 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 94 (342)
.+....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+ +.+|..+..... +|.++...|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhh
Confidence 3446678889999999999999999999999999999999999999999999995 678877766554 79999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccC
Q psy17917 95 VPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSIL 174 (342)
Q Consensus 95 ~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 174 (342)
..++..++..+|.+++++||+|||+||++|++|++..+++++..+++++|+++++.++|+++. ...........|...
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~--~~~~~~~~~~~C~~~ 199 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF--ANVSEADDRYICDRF 199 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHH--EEEEECSSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHh--eeeeccCCceEEeec
Confidence 999999999999999999999999999999999999999999999999999999999998774 222333445567654
Q ss_pred CCCC--CchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchh---------------------------
Q psy17917 175 PDEN--GRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQS--------------------------- 225 (342)
Q Consensus 175 ~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~--------------------------- 225 (342)
+... ...+.....++.+++|+++++++|..|++.++++.++.+........
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (502)
T 3odu_A 200 YPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 279 (502)
T ss_dssp CSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccc
Confidence 4332 22244445677889999999999999999999865443211000000
Q ss_pred --------------------------------------------------------------------------------
Q psy17917 226 -------------------------------------------------------------------------------- 225 (342)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (342)
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (502)
T 3odu_A 280 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 359 (502)
T ss_dssp HHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccc
Confidence
Q ss_pred ------------------------------------hhhHHHHHhhhccchhHHHHHHHHHHHHHhhhhHHHHHhccCC-
Q psy17917 226 ------------------------------------KKDQKELKAKRNDMRITKMVLVIFLSFLTCYLPITVVKTVDSE- 268 (342)
Q Consensus 226 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~- 268 (342)
...+...++.++++|+++++++++++|++||+|+.+..++...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~ 439 (502)
T 3odu_A 360 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFI 439 (502)
T ss_dssp HHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0000011234457899999999999999999999996654321
Q ss_pred -----CC-------CchHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhhh
Q psy17917 269 -----VH-------FPGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNRL 315 (342)
Q Consensus 269 -----~~-------~~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~~ 315 (342)
.. ...+..+..++.++|+++||+||++++++||++++++++|++++.
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 498 (502)
T 3odu_A 440 LLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLE 498 (502)
T ss_dssp HTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSCG
T ss_pred HHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCchh
Confidence 11 112445778899999999999999999999999999998766543
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=314.43 Aligned_cols=284 Identities=22% Similarity=0.408 Sum_probs=217.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhh
Q psy17917 15 PDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTV 94 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 94 (342)
+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++. ++.+|..+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 344556777888999999999999999999999999999999999999999988 5778888888888889999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccC
Q psy17917 95 VPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSIL 174 (342)
Q Consensus 95 ~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 174 (342)
..++..++..+|.+++++||+|||++|++|++|++..+++++..+++++|+++++.++|.... ...........|...
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~--~~~~~~~~~~~c~~~ 277 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIM--GSAQVEDEEIECLVE 277 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHH--EEECCCSSCCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHhee--eeeEeecCceeEEEe
Confidence 999999999999999999999999999999999999999999999999999999999887763 223333345567655
Q ss_pred CCCCC----chhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHH
Q psy17917 175 PDENG----RSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFL 250 (342)
Q Consensus 175 ~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
..... ..+.....++.+++|+++++++|..|++.+++++++.+ ..++.++++|.+++++++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~vv~ 344 (434)
T 4ea3_A 278 IPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSG-------------SREKDRNLRRITRLVLVVVA 344 (434)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSS-------------CHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------chhhHHHHhHHHHHHHHHHH
Confidence 44332 23445566778899999999999999998876532210 01223445689999999999
Q ss_pred HHHHhhhhHHHHHhccCCC---CCc---hHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhh
Q psy17917 251 SFLTCYLPITVVKTVDSEV---HFP---GLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNR 314 (342)
Q Consensus 251 ~f~~~~~P~~i~~~~~~~~---~~~---~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~ 314 (342)
+|++||+|+.+..+..... ... ....+...+.++|+++||+||++++++||+++++++||++++
T Consensus 345 ~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~ 414 (434)
T 4ea3_A 345 VFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASALG 414 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence 9999999999987754221 111 244556668899999999999999999999999988765543
No 18
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=292.15 Aligned_cols=272 Identities=22% Similarity=0.458 Sum_probs=213.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHHHhhhhhhhhHHHhhccccccccchhh
Q psy17917 15 PDVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFFCLLVIPFSTTRFYFKTWIHGKFLCTV 94 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 94 (342)
++....+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ .+|....... .+|..++..|+.
T Consensus 7 ~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~ 84 (296)
T 2lnl_A 7 ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKV 84 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHH
Confidence 34456677888899999999999999999999999999999999999999999875 5666555444 579999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHHHHhhhccccCCCCccccCCCccccccC
Q psy17917 95 VPFIQYSNVGVSLSCIAMITINRYIMIAHHQMYNTIYKPVWIGCMIAFCYALSFGMQIPTLAGQWGRFDLDTRLLTCSIL 174 (342)
Q Consensus 95 ~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 174 (342)
..+....+..+|.+++++||+|||+||++|++++...+ ++...+++++|+.+++.++|+... +.....+.....|...
T Consensus 85 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~~~ 162 (296)
T 2lnl_A 85 VSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKR-HLVKFVCLGCWGLSMNLSLPFFLF-RQAYHPNNSSPVCYEV 162 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHT-SSCCCCCTTSCCCCSC
T ss_pred HhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhh-hhhHheehHHHHHHHHHhcchhhc-ceeecCCCCCceeeee
Confidence 99999999999999999999999999999999887644 566677888999999999998876 3333333322222221
Q ss_pred ----CCCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcHHHHhhccccchhhhhHHHHHhhhccchhHHHHHHHHH
Q psy17917 175 ----PDENGRSSKRALFLIGFVIPCVIIILCYAKIFWVVRSSEKRLRRHTSKIQSKKDQKELKAKRNDMRITKMVLVIFL 250 (342)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
.......+......+.+++|+.++..+|..+.+.++++. .++++|.++++..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~---------------------~~~~~k~~~~~~~v~~ 221 (296)
T 2lnl_A 163 LGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH---------------------MGQKHRAMRVIFAVVL 221 (296)
T ss_dssp CSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCC---------------------CHHHHTHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------hhhhhhHHHHHHHhhh
Confidence 112233344455667788999999999998876554321 1223488999999999
Q ss_pred HHHHhhhhHHHHHhccC----CCCC---------chHHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhh
Q psy17917 251 SFLTCYLPITVVKTVDS----EVHF---------PGLHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCE 311 (342)
Q Consensus 251 ~f~~~~~P~~i~~~~~~----~~~~---------~~~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~ 311 (342)
.|++||+|+.+..+... .... .....+...++++||++||+||.++|+|||+++++++||+
T Consensus 222 ~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 222 IFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred heeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence 99999999998876531 1111 1245567788999999999999999999999999999874
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.72 E-value=1.7e-09 Score=60.13 Aligned_cols=37 Identities=24% Similarity=0.549 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhh
Q psy17917 275 HVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCE 311 (342)
Q Consensus 275 ~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~ 311 (342)
..+..++.++||++||+||.+.+++||++++++++|+
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 4567789999999999999999999999999887553
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.49 E-value=1.9e-08 Score=52.69 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhhheecccccccccchhh
Q psy17917 105 VSLSCIAMITINRYIMIAHHQMYNTIYKPV 134 (342)
Q Consensus 105 ~s~~~~~~iaidRy~ai~~p~~~~~~~~~~ 134 (342)
+|.+++++|++|||+||++|++|....+++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999988776654
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.88 E-value=4.4e-06 Score=43.69 Aligned_cols=29 Identities=21% Similarity=0.588 Sum_probs=25.4
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHhcc
Q psy17917 238 DMRITKMVLVIFLSFLTCYLPITVVKTVD 266 (342)
Q Consensus 238 ~~~~~~~~~~~~~~f~~~~~P~~i~~~~~ 266 (342)
|+|.++++.++++.|++||+|+.+..+..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 35888999999999999999999987654
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.10 E-value=0.00022 Score=42.94 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhccCCcc
Q psy17917 21 ITAVCTVIIAVVGVVGNSLTVVALLRCPKI 50 (342)
Q Consensus 21 ~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~ 50 (342)
+..+++.+++++|++||+++++++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 677889999999999999999998876653
No 23
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=70.85 E-value=37 Score=29.11 Aligned_cols=34 Identities=15% Similarity=-0.151 Sum_probs=19.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHhhhhhhccCCc
Q psy17917 16 DVTLKITAVCTVIIAVVGVVGNSLTVVALLRCPK 49 (342)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~ 49 (342)
.....+...+..+++++|=+..++++..-.+.++
T Consensus 34 ~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~ 67 (448)
T 2z73_A 34 YYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQT 67 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCC
Confidence 4444445555566666666666666665554433
No 24
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=53.56 E-value=11 Score=17.03 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=10.6
Q ss_pred hhHHHHHHHHHhh
Q psy17917 298 KQYRVAYKTVLMC 310 (342)
Q Consensus 298 ~~~R~~~~~~~~~ 310 (342)
++||+.+++++..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6789999998854
No 25
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=51.06 E-value=1.1e+02 Score=25.80 Aligned_cols=31 Identities=6% Similarity=0.048 Sum_probs=13.6
Q ss_pred HHHHhhhchhhhHHhhcchhHHHHHHHHHhh
Q psy17917 280 IFLYLSACINPIIYVIMNKQYRVAYKTVLMC 310 (342)
Q Consensus 280 ~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~ 310 (342)
.-..+||.+--+.---+.+++|+.+++..++
T Consensus 400 ~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r 430 (447)
T 4eiy_A 400 TNSVVNPFIYAYRIREFRQTFRKIIRSHVLR 430 (447)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTC--
T ss_pred HHhccchhhhHhccHHHHHHHHHHHHHHHhc
Confidence 3344444444444444445555555444433
No 26
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=48.12 E-value=23 Score=18.26 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=8.4
Q ss_pred hhhHHH-HHHHHHHHHHHH
Q psy17917 193 IPCVII-ILCYAKIFWVVR 210 (342)
Q Consensus 193 ~p~~~~-~~~~~~i~~~l~ 210 (342)
+|++++ ++.|..+++--+
T Consensus 7 l~~v~~~~ifYFl~iRPQ~ 25 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQ 25 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHH
Confidence 344333 455666654333
No 27
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=41.80 E-value=1.7e+02 Score=25.08 Aligned_cols=43 Identities=9% Similarity=0.081 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHhhhhhhhh
Q psy17917 274 LHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLMCEKNRLL 316 (342)
Q Consensus 274 ~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~~~~~~~~ 316 (342)
...+...-..+|+.+--+.---+.+++|+.+++.++|.+....
T Consensus 435 ~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~~~~~~ 477 (488)
T 3eml_A 435 AIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK 477 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcccccCCCCC
Confidence 3445555666777777776667778888888777766554443
No 28
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=37.44 E-value=2.1e+02 Score=25.02 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhccCCccccchhhHHHhHhHHHHHH
Q psy17917 23 AVCTVIIAVVGVVGNSLTVVALLRCPKIRNVAAAFIVSLCIADFFF 68 (342)
Q Consensus 23 ~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~~~~~~l~~lai~dl~~ 68 (342)
.++.++..+++++|=...++++.--.+.++... ..+.-+.++..
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~--~~~~~l~nLA~ 107 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHR--PMYYFIGNLAL 107 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC--hHHHHHHHHHH
Confidence 445555566666666666666665544333332 33444444433
No 29
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=34.22 E-value=2.3e+02 Score=24.60 Aligned_cols=33 Identities=6% Similarity=0.018 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhccCCcccc
Q psy17917 20 KITAVCTVIIAVVGVVGNSLTVVALLRCPKIRN 52 (342)
Q Consensus 20 ~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~~~~ 52 (342)
.......++..+++++|=...++++.--.+.++
T Consensus 180 ~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~ 212 (514)
T 3sn6_R 180 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFER 212 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhheecccc
Confidence 345556666677777777777777766554333
No 30
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=22.70 E-value=90 Score=16.05 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHhh
Q psy17917 22 TAVCTVIIAVVGVVGN 37 (342)
Q Consensus 22 ~~~~~~~~~~~g~~~N 37 (342)
..++++.++++|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 3445556667777666
No 31
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=21.37 E-value=1.2e+02 Score=26.52 Aligned_cols=36 Identities=3% Similarity=0.094 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhhhchhhhHHhhcchhHHHHHHHHHh
Q psy17917 274 LHVISYIFLYLSACINPIIYVIMNKQYRVAYKTVLM 309 (342)
Q Consensus 274 ~~~~~~~l~~~~~~~np~iy~~~~~~~R~~~~~~~~ 309 (342)
...+...=..+||++-.+.--=+.+.|++.++..++
T Consensus 455 ~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~ 490 (510)
T 4grv_A 455 TNALAYASSAINPILYNLVSANFRQVFLSTLACLCP 490 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCC----------
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Confidence 344555667789999888888899999999875443
Done!