BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17930
(110 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 21 SVSNMLVTSCRDNICRLWVETVLPDDG--LINMSQFDPMAAQNPKFIQVTPTLDRDMYNL 78
+ +N LVT I + VE +L + +IN+ +A+N KFI+ T +D+ N+
Sbjct: 3 AXANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNV 62
Query: 79 L 79
L
Sbjct: 63 L 63
>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD D+
Sbjct: 165 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNDL 219
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure Of Mutant
W275g
pdb|3ART|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Dequalinium
pdb|3ARU|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Pentoxifylline
pdb|3AS0|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Sanguinarine
pdb|3AS1|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Chelerythrine
pdb|3AS2|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Propentofylline
pdb|3AS3|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With 2-(Imidazolin-
2-Yl)-5-Isothiocyanatobenzofuran
Length = 584
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 10 GPSRSVKTLEGSVSNMLVTSCR 31
GP+ SVK++ G+ N L T+CR
Sbjct: 176 GPNESVKSVGGNSFNALQTACR 197
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Hexasaccharide
pdb|3B9D|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Pentasaccharide
pdb|3B9E|A Chain A, Crystal Structure Of Inactive Mutant E315m Chitinase A
From Vibrio Harveyi
Length = 584
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 10 GPSRSVKTLEGSVSNMLVTSCR 31
GP+ SVK++ G+ N L T+CR
Sbjct: 176 GPNESVKSVGGNSFNALQTACR 197
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3B8S|B Chain B, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3ARO|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure
pdb|3ARP|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Dequalinium
pdb|3ARQ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Idarubicin
pdb|3ARR|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Pentoxifylline
pdb|3ARV|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Sanguinarine
pdb|3ARW|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Chelerythrine
pdb|3ARX|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Propentofylline
pdb|3ARY|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
pdb|3ARZ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
Length = 584
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 10 GPSRSVKTLEGSVSNMLVTSCR 31
GP+ SVK++ G+ N L T+CR
Sbjct: 176 GPNESVKSVGGNSFNALQTACR 197
>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y)
Length = 315
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 165 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 219
>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f)
Length = 315
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 165 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 219
>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a)
Length = 315
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 165 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 219
>pdb|1F1C|A Chain A, Crystal Structure Of Cytochrome C549
pdb|1F1C|B Chain B, Crystal Structure Of Cytochrome C549
Length = 129
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 26 LVTSCRDNICRL--WVETVLPDDGLINMSQFDPMAAQNPKFIQVTPTLDRDMYNL 78
L T RDNI L +++ DG + +S+ P + F ++ + D+YN+
Sbjct: 59 LATPPRDNIAALVDYIKNPTTYDGFVEISELHPSLKSSDIFPKMRNISEDDLYNV 113
>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3PSL|B Chain B, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3UVK|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll2
pdb|3UVL|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll3
pdb|3UVM|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll4
pdb|3UVN|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVN|C Chain C, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVO|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1b
Length = 318
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 168 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 222
>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX
pdb|2H14|A Chain A, Crystal Of Wdr5 (Apo-Form)
pdb|3P4F|A Chain A, Structural And Biochemical Insights Into Mll1 Core Complex
Assembly And Regulation
Length = 317
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 167 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 221
>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel
Histone Mark That Supports Euchromatin Maintenance
Length = 318
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 168 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 222
>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|C Chain C, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|D Chain D, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|4IA9|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 In Complex
With 2-
Chloro-4-Fluoro-3-Methyl-N-[2-(4-Methylpiperazin-1-Yl)-
5- Nitrophenyl]benzamide
Length = 312
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 216
>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9M|C Chain C, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9N|A Chain A, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2H9N|C Chain C, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2O9K|A Chain A, Wdr5 In Complex With Dimethylated H3k4 Peptide
pdb|2O9K|C Chain C, Wdr5 In Complex With Dimethylated H3k4 Peptide
Length = 313
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 163 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 217
>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 311
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 161 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 215
>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H68|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|3EG6|A Chain A, Structure Of Wdr5 Bound To Mll1 Peptide
pdb|4ERQ|A Chain A, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|B Chain B, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|C Chain C, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERY|A Chain A, X-Ray Structure Of Wdr5-Mll3 Win Motif Peptide Binary
Complex
pdb|4ERZ|A Chain A, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|B Chain B, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|C Chain C, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ES0|A Chain A, X-Ray Structure Of Wdr5-Setd1b Win Motif Peptide Binary
Complex
pdb|4ESG|A Chain A, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4ESG|B Chain B, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4EWR|A Chain A, X-Ray Structure Of Wdr5-Setd1a Win Motif Peptide Binary
Complex
Length = 312
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 216
>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1
Angstrom
pdb|2CO0|C Chain C, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 165 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 219
>pdb|2H9L|A Chain A, Wdr5delta23
pdb|2H9P|A Chain A, Wdr5 In Complex With Trimethylated H3k4 Peptide
Length = 329
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 179 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 233
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 25.4 bits (54), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 12 SRSVKTL--EGSVSNMLVTSCRDNICRLWVETVLPDDGLINMSQFDPMAAQNPKF 64
SR V L EG + + + + I + E+ + DG IN+S+F + +++P F
Sbjct: 152 SRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDF 206
>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction
Length = 318
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 168 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 222
>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
pdb|2G99|B Chain B, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 308
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 24 NMLVTSCRDNICRLW-------VETVLPDDG-LINMSQFDPMAAQNPKFIQVTPTLDRDM 75
+++V+S D +CR+W ++T++ DD ++ +F P N K+I + TLD +
Sbjct: 158 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYI-LAATLDNTL 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,355,159
Number of Sequences: 62578
Number of extensions: 115778
Number of successful extensions: 190
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 24
length of query: 110
length of database: 14,973,337
effective HSP length: 74
effective length of query: 36
effective length of database: 10,342,565
effective search space: 372332340
effective search space used: 372332340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)