Query psy17934
Match_columns 584
No_of_seqs 307 out of 1361
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 18:03:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0941|consensus 100.0 5.4E-98 1E-102 818.2 30.3 468 32-584 267-738 (850)
2 COG5021 HUL4 Ubiquitin-protein 100.0 9.8E-54 2.1E-58 485.7 26.1 278 295-584 470-753 (872)
3 cd00078 HECTc HECT domain; C-t 100.0 4.5E-51 9.7E-56 433.4 23.3 234 344-583 2-239 (352)
4 KOG0942|consensus 100.0 1.3E-48 2.9E-53 430.1 21.2 273 298-584 601-886 (1001)
5 smart00119 HECTc Domain Homolo 100.0 5.3E-47 1.1E-51 399.2 21.1 214 367-584 3-222 (336)
6 KOG4427|consensus 100.0 1E-44 2.2E-49 390.3 27.8 312 243-584 632-956 (1096)
7 KOG0939|consensus 100.0 1.7E-45 3.7E-50 397.6 19.3 265 297-584 333-601 (720)
8 KOG0170|consensus 100.0 2.1E-41 4.5E-46 354.0 17.1 308 249-583 131-499 (621)
9 PF00632 HECT: HECT-domain (ub 100.0 8.1E-34 1.8E-38 297.0 14.8 187 396-584 1-200 (317)
10 KOG0940|consensus 100.0 6.7E-31 1.4E-35 275.3 6.2 232 341-584 15-249 (358)
11 KOG0943|consensus 99.8 1.5E-19 3.3E-24 201.6 15.3 152 430-583 2743-2898(3015)
12 KOG0941|consensus 95.0 0.037 8.1E-07 63.6 5.9 174 23-197 196-373 (850)
13 PF09301 DUF1970: Domain of un 28.2 19 0.00042 30.4 0.0 18 7-24 56-73 (117)
14 KOG0742|consensus 20.8 2.5E+02 0.0054 31.2 6.5 22 38-59 71-92 (630)
No 1
>KOG0941|consensus
Probab=100.00 E-value=5.4e-98 Score=818.15 Aligned_cols=468 Identities=41% Similarity=0.666 Sum_probs=425.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHcCCChhHHHHHHHHHHH-HHHHHHHhhhcCCCCCCCcccchhhhhhccCcCCCCCcch
Q psy17934 32 GDLDTELTLDIKSVRRAYEQLFALPSSEFEHTLVQALVT-LSEYINVQLRCGSSLLSTDSLINVFLVIFEIPSLGGCDYV 110 (584)
Q Consensus 32 ~~~~~~~~VDl~~ar~~f~~L~~~~~~~i~~~i~~al~~-Ll~~L~~~l~~~~~~~~~~e~LriflIL~E~P~~~~~~~~ 110 (584)
.+....+++|++.|+.+|..|......++.+.|..++.. |...+. . +++++|++++++++|++|.++.++++
T Consensus 267 ~c~~~~~~ld~~~~~~~f~~l~~~~~~~~~~~l~~~~~~~L~~~~s----~---~~~d~e~~~i~l~l~~~~~~~~s~~~ 339 (850)
T KOG0941|consen 267 FCSFQIHGLDLNLARPAFLELTLPLFCKILSELLVAIQKRLIRLWS----K---YPADQEALYILLLLPLIPLNVLSNEY 339 (850)
T ss_pred ccceecccccHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhh----h---CCcHHHHHHHHHHcccchHHHHHHHH
Confidence 378889999999999999999655667788778777764 776662 3 57899999999999999999999999
Q ss_pred hhhHHHHHHHHhcCChHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccCCCCccccccCcccchhhhHHHHHHHHHh
Q psy17934 111 ERALPKICKAASQLPLTAQARIARIWAAHCKQRLKTILEALQQLITIKTISNHYHKDYILQDEETITLPTKIMRILFYAN 190 (584)
Q Consensus 111 ~~l~~~f~~ai~~L~~~~~~~L~~wWs~l~~~~f~rlV~~~kq~It~~l~~~~~~~~~~~~~d~~i~~a~k~l~~l~~an 190 (584)
.+...||+++++.+......+++.||+.+++.+|+++|++++.+|+..+.... .....++.|.++.+
T Consensus 340 ~s~~vp~~~~i~~~~~~~~~~l~~~~~~~~~k~~~~~v~~f~~~V~~~l~~~~----~~~~e~~~i~~~l~--------- 406 (850)
T KOG0941|consen 340 NSLNVPFADAICIVAENKRLKLVEYWNQLSPKYFRKLVSMFKEAVTEILKFSK----ELAEENKGIRSALK--------- 406 (850)
T ss_pred HhccCcHHHHHHHhhcchHHHHHHHHHHhchhhcchhhhchhhHHHHhhhccc----hhhhhccchhhHHH---------
Confidence 99999999999999999999999999999999999999999999999874321 11222444444443
Q ss_pred hhcCCCCCCCCCCCCCCCCCCcccccccccccccccccccchHHHHHHHHhcccccCCCCCCCCCcccccccccccchhh
Q psy17934 191 ILAGDLDPPCLRDETQDPEDNHESMFGVDISSSKSSVQANHYEDSLAKLLQINVLDSRKPLIPFLEFYNEPLSDAIEMDR 270 (584)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~n~~~~~~~~ip~~~F~~~~l~~~~~~~~ 270 (584)
.++++|.+| |+.+.||++.||++++++.+|+++
T Consensus 407 --------------------------------------------~~~lly~vN---~~~~lip~e~FY~~~l~~~id~~~ 439 (850)
T KOG0941|consen 407 --------------------------------------------LLELLYKVN---CRKGLIPYEEFYNEELNDRIDMKE 439 (850)
T ss_pred --------------------------------------------HHHHHHHHh---ccCCCCCHHHhhhHHHHhHHHHHH
Confidence 455566666 467889999999999999999999
Q ss_pred HHhhhhhhhcccccccccccccccccceeccccccchhHHHHHhhHhHHHHHHHHHHHHHHHHhhCCC---CCCceEEEe
Q psy17934 271 DFGYYRASEELTSETDCASSSRFLKFSFMYYSFILTPATKTLGLYYDSRIRMYSGRRISYLQSVVGQP---TNPYLRLKV 347 (584)
Q Consensus 271 d~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~Pfll~~~~K~~~l~~d~~~~~~~~~~~~~~~s~~~~~---~~p~l~l~V 347 (584)
||..|+.. ....|+||+|||||+..+|+.+|++|++++|..+++.+++.++.... ++|++.|+|
T Consensus 440 dy~~w~~~-------------~~~~fsfc~ypFIL~~~aK~~lL~yD~rlrM~~~~~~a~~~s~~~~~~~~~~p~l~l~V 506 (850)
T KOG0941|consen 440 DYVHWRTK-------------QMNCFSFCNYPFILNAVAKIELLQYDARLRMESERRKAFLSSLFQGLQLLVSPYLKLTV 506 (850)
T ss_pred HHHHHHHH-------------hcccceeecCCeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcEEEEE
Confidence 99999952 22389999999999999999999999999999999999999887332 589999999
Q ss_pred cCCccHHHHHHHHHHHHccCchhcccceEEEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCcccccCCchh
Q psy17934 348 RRDHIIEDALVELEMIAMENEKDLKKQLVVEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSDTQHMWFNQMSFE 427 (584)
Q Consensus 348 rR~~il~dal~~l~~~~~~~~~~lkk~L~V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~~~~~~fnp~s~~ 427 (584)
||++|++|++++|+ +.+..|+||+|+|+|.||+|+|+|||+||||.++++||++|+||||+++++++.+||++.+++
T Consensus 507 rR~~lv~Dsl~~l~---~~~~~Dl~K~L~V~F~gE~g~DaGGv~kEfF~ll~~ei~~p~~GmF~~~e~s~~~WF~~~~~~ 583 (850)
T KOG0941|consen 507 RRDHLVEDALRQLS---MISMSDLKKQLKVEFVGEEGVDAGGVRKEFFQLLVEEIFNPEYGMFTYDEESSLLWFNPSPFE 583 (850)
T ss_pred ehhhhHHHHHHHHH---hhhhhhhhcceEEEECCCcccccCchHHHHHHHHHHHHcCccccCeecccccceeeecCCCCC
Confidence 99999999999994 456679999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccCCCcccccccceEEEeeC
Q psy17934 428 SDAQFTLVGIILGLAIYNNIILDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEGQDMEDVFSQTFRICFTD 507 (584)
Q Consensus 428 ~~~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l~F~~~~~d 507 (584)
...+|++||++||+||||.+++|+|||+++|||||+.+++++||.++.|.+|+||+.||+|+|+|+||+|+++|++++ +
T Consensus 584 ~~~~y~liGil~GLAIyN~~ildlpFPlAlykkLl~~~~sl~DL~elsP~~~~sL~~lL~y~gdd~ed~f~l~F~i~~-~ 662 (850)
T KOG0941|consen 584 EEKQYHLIGILCGLAIYNNTILDLPFPLALYKKLLDKPPSLEDLKELSPSLGKSLKELLDYEGDDVEDVFDLTFQISQ-D 662 (850)
T ss_pred ccceeeehhHHHHHHHhccceecCCCcHHHHHHHhcCCCCHHHHHhhChHhhhhHHHHHhccccchhhheeeEEEEEe-h
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999999997 6
Q ss_pred CCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 508 PFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 508 ~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
.+|..++++|+|||.+|+||++||+|||++||+|.+|++|++||+||++||++||+++.+. +|+|+||+.+|||+.
T Consensus 663 ~~g~~~~~~L~~nG~~i~vt~~Nr~efV~~Yvd~~~n~sv~~q~~aF~~GF~~v~~~~~l~-lf~peEl~~li~G~~ 738 (850)
T KOG0941|consen 663 DNGIPRTYELKPNGDEIPVTNENRREFVNLYVDYILNKSVKKQFEAFRRGFYKVCDENLLR-LFQPEELEKLICGSE 738 (850)
T ss_pred hcCccceeeccCCCcccccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhchhhhh-hcCHHHHHHHHhCCC
Confidence 7889999999999999999999999999999999999999999999999999999998886 999999999999984
No 2
>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.8e-54 Score=485.68 Aligned_cols=278 Identities=37% Similarity=0.597 Sum_probs=239.9
Q ss_pred ccceeccccccchhHHHHHhhHhHHHHHHHHHHHHHHHHhh--CCCCCCceEEEecCCccHHHHHHHHHHHHccCchhcc
Q psy17934 295 KFSFMYYSFILTPATKTLGLYYDSRIRMYSGRRISYLQSVV--GQPTNPYLRLKVRRDHIIEDALVELEMIAMENEKDLK 372 (584)
Q Consensus 295 ~~~~~~~Pfll~~~~K~~~l~~d~~~~~~~~~~~~~~~s~~--~~~~~p~l~l~VrR~~il~dal~~l~~~~~~~~~~lk 372 (584)
.+.||.+| ...|..+...+. .|++...|+.++.+.. .....|++.|+|||+++++|+++++ ...+..++|
T Consensus 470 ~~~~~~~~----~g~~~~~~~~~~-~r~~~~~r~~l~~~~~~~~~~~~~~l~I~VrRd~vf~Dsy~~i---~~~~~~~~k 541 (872)
T COG5021 470 TLTKNDSR----LGSFISLNKLDI-RRIKEDKRRKLFYSLKQKAKIFDPYLHIKVRRDRVFEDSYREI---MDESGDDLK 541 (872)
T ss_pred eeeecCCC----CchhhhhchhHH-HHHHHHHHHHHHHHHhhhccccCcceEEEEecccchHHHHHHH---HHhchhhhc
Confidence 34556665 333443333333 3444444444444433 2456799999999999999999999 445677888
Q ss_pred cceEEEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCC-CCcccccCCch---hhHHHHHHHHHHHHHHHhcCCc
Q psy17934 373 KQLVVEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSD-TQHMWFNQMSF---ESDAQFTLVGIILGLAIYNNII 448 (584)
Q Consensus 373 k~L~V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~-~~~~~fnp~s~---~~~~~f~liG~l~GlAI~n~~~ 448 (584)
+.|+|+|.||+|+|+||++||||.++++++|+|+||+|.+..+ ..+.|+||.+. +...+|+|+|++||+||||++.
T Consensus 542 ~~L~i~F~~EeGiD~GGltrE~~~lLs~~~Fnp~y~LF~y~t~d~~~~~~n~~s~~npe~L~yf~fiGrvIGkaIyd~~~ 621 (872)
T COG5021 542 KTLEIEFVGEEGIDAGGLTREWLFLLSKEMFNPDYGLFEYITEDLYTLPINPLSSINPEHLSYFKFLGRVIGKAIYDSRI 621 (872)
T ss_pred ceEEEEecCcccccCCccchHHHHHHhHHhcCCcccceeeecccccccCcCccccCCHHHHHHHHHHHHHHHHHHHhcce
Confidence 8899999999999999999999999999999999999999764 55677888775 3456899999999999999999
Q ss_pred cCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccCCCcccccccceEEEeeCCCCceEEEecCCCCCccccCh
Q psy17934 449 LDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEGQDMEDVFSQTFRICFTDPFGAFISHDLKPDGDNIAVTQ 528 (584)
Q Consensus 449 l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l~F~~~~~d~~G~~~~~eL~p~G~~i~VT~ 528 (584)
||++||.+||||||+++++++|+.++||++|++|.+|++++.++. .++++|++. .+.+|+.++|||||||++|+||+
T Consensus 622 LD~~F~~~fyKklL~~~~sl~Dl~s~Dpe~y~sLv~ll~~~~d~~--~l~l~Fsve-~~~fg~~~tVeLipnG~ni~VT~ 698 (872)
T COG5021 622 LDVQFSKAFYKKLLGKPVSLVDLESLDPELYRSLVWLLNNDIDET--ILDLTFTVE-DDSFGESRTVELIPNGRNISVTN 698 (872)
T ss_pred eeecchHHHHHHHhCCCCchhhhhhcCHHHHHHHHHHHcCCCCcc--eeeeeEEEe-ecccCceeEEEeccCCccccccc
Confidence 999999999999999999999999999999999999999877442 689999998 68999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 529 ENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 529 ~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
+||+|||.+|++|+++++|++||+||..||.+|||.+++. +|++.|||.||||.+
T Consensus 699 ~Nk~eYV~~vvdy~L~k~ie~Q~~AF~~GF~~ii~~~~i~-iF~e~ELe~LI~G~~ 753 (872)
T COG5021 699 ENKKEYVKKVVDYKLNKRVEKQFSAFKSGFSEIIPPDLLQ-IFDESELELLIGGIP 753 (872)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHhhHHHhcCHHHHh-hcCHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999886 999999999999974
No 3
>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Probab=100.00 E-value=4.5e-51 Score=433.40 Aligned_cols=234 Identities=48% Similarity=0.834 Sum_probs=219.2
Q ss_pred EEEecCCccHHHHHHHHHHHHccCchhcccceEEEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCC-CCccccc
Q psy17934 344 RLKVRRDHIIEDALVELEMIAMENEKDLKKQLVVEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSD-TQHMWFN 422 (584)
Q Consensus 344 ~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~-~~~~~fn 422 (584)
+|+|||++|++|+++++ ....+.+++++|+|+|.||+|+|+|||+||||+++++|+++|++|||+.+++ .+.+|||
T Consensus 2 ~i~v~R~~i~~~~~~~l---~~~~~~~l~~~l~V~F~gE~g~D~GG~~rE~~~~l~~el~~~~~~lF~~~~~~~~~~~~~ 78 (352)
T cd00078 2 KITVRRDRILEDALRQL---SKVSSSDLKKVLEVEFVGEEGIDAGGVTREFFTLVSKELFNPSYGLFRYTPDDSGLLYPN 78 (352)
T ss_pred eEEEECCcHHHHHHHHH---HhcCHHHhcCceEEEECCCCccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCceEEeC
Confidence 68999999999999999 5556678999999999999999999999999999999999999999999988 6899999
Q ss_pred CCchh---hHHHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccCCCccccccc
Q psy17934 423 QMSFE---SDAQFTLVGIILGLAIYNNIILDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEGQDMEDVFSQ 499 (584)
Q Consensus 423 p~s~~---~~~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l 499 (584)
|.+.. ..++|+++|+++|+||+++.+++++||++|||+|+|.+++++||+++||++|++|++|++++. ++ +.+++
T Consensus 79 p~~~~~~~~~~~f~~~G~lig~al~~~~~l~l~f~~~f~k~L~g~~~t~~Dl~~iD~~~~~sl~~l~~~~~-~~-~~l~l 156 (352)
T cd00078 79 PSSFADEDHLKLFRFLGRLLGKALYEGRLLDLPFSRAFYKKLLGKPLSLEDLEELDPELYKSLKELLDNDG-DE-DDLEL 156 (352)
T ss_pred CCcccchhHHHHHHHHHHHHHHHHHcCceeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCC-ch-hhhcc
Confidence 99874 568899999999999999999999999999999999999999999999999999999999875 33 46899
Q ss_pred ceEEEeeCCCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhc
Q psy17934 500 TFRICFTDPFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQL 579 (584)
Q Consensus 500 ~F~~~~~d~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~l 579 (584)
+|++......|...++||+|||++++||.+||++||+++++|+++++++.|++||++||++|+|...+. +|+|+||+.+
T Consensus 157 ~F~~~~~~~~~~~~~veL~~~G~~~~VT~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~-~f~~~eL~~l 235 (352)
T cd00078 157 TFTIELDSSFGGAVTVELKPGGRDIPVTNENKEEYVDLYVDYRLNKGIEEQVEAFRDGFSEVIPEELLS-LFTPEELELL 235 (352)
T ss_pred eeEEEEeecCCCcceEecCCCCCCCcCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHcCHHhhh-CCCHHHHHHH
Confidence 999985433788889999999999999999999999999999999999999999999999999999886 9999999999
Q ss_pred cccC
Q psy17934 580 VCGS 583 (584)
Q Consensus 580 i~G~ 583 (584)
|||+
T Consensus 236 vcG~ 239 (352)
T cd00078 236 ICGS 239 (352)
T ss_pred hCCC
Confidence 9997
No 4
>KOG0942|consensus
Probab=100.00 E-value=1.3e-48 Score=430.09 Aligned_cols=273 Identities=30% Similarity=0.518 Sum_probs=238.9
Q ss_pred eeccccccchhHHHHHhhHhHHHHHHHHHHHHHH-HHhhCCCCCCceEEEecCCccHHHHHHHHHHHHccCchhcccceE
Q psy17934 298 FMYYSFILTPATKTLGLYYDSRIRMYSGRRISYL-QSVVGQPTNPYLRLKVRRDHIIEDALVELEMIAMENEKDLKKQLV 376 (584)
Q Consensus 298 ~~~~Pfll~~~~K~~~l~~d~~~~~~~~~~~~~~-~s~~~~~~~p~l~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~ 376 (584)
+.+.||++++..++++++.--. .. +++.- +.-++ ..+...++||||||++||++++ ++.+..++|..++
T Consensus 601 L~e~PF~vPF~~RVklfq~lla----~d-Kq~~~~~~~F~--~g~s~~~tIRRd~iyeDAfd~f---~p~~e~dlk~~iR 670 (1001)
T KOG0942|consen 601 LKEIPFFVPFEERVKLFQRLLA----LD-KQRHGGDGPFG--MGFSPSATIRRDHIYEDAFDAF---SPKGEPDLKSSIR 670 (1001)
T ss_pred HHcCCeeechHHHHHHHHHHHH----HH-HHhhcCCCCcc--CCCCccEEEehhhhHHHHHHhc---CccCCcccccceE
Confidence 4589999999988887753110 00 00100 00011 1223578999999999999999 7778889999999
Q ss_pred EEEec-----ccccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCcccccCCch-----hhHHHHHHHHHHHHHHHhcC
Q psy17934 377 VEFEG-----EQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSDTQHMWFNQMSF-----ESDAQFTLVGIILGLAIYNN 446 (584)
Q Consensus 377 V~F~G-----E~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~~~~~~fnp~s~-----~~~~~f~liG~l~GlAI~n~ 446 (584)
|+|++ |+|||.||++|||.+.++++.|||+||+|+.+++ ..+||||.+. +..+.|.|+|+++|+|||.|
T Consensus 671 VtfVne~G~~EaGIDGGGIfkEFLtel~ktaFdpn~GlF~~T~~-~lLYPNp~~~~l~~~~~lkhy~FLGrllGK~iYE~ 749 (1001)
T KOG0942|consen 671 VTFVNEHGVDEAGIDGGGIFKEFLTELLKTAFDPNYGLFKETED-HLLYPNPTAAMLLDVDCLKHYYFLGRLLGKCIYEG 749 (1001)
T ss_pred EEEecccCccccCccCcccHHHHHHHHHHhhcCccccceeeccc-ceecCCCCchhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 99985 7899999999999999999999999999999987 6899999864 23578999999999999999
Q ss_pred CccCcCCcHHHHHHHhCCCC--ccccccccChhhhhhHHHHhhccCCCcccccccceEEEeeCCCCceEEEecCCCCCcc
Q psy17934 447 IILDVNFPMVVYKKLMGKRG--SFYDLEDFNPVLFNGLRDLLDYEGQDMEDVFSQTFRICFTDPFGAFISHDLKPDGDNI 524 (584)
Q Consensus 447 ~~l~l~Fp~~~yK~Llg~~~--tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l~F~~~~~d~~G~~~~~eL~p~G~~i 524 (584)
+.+++||...|.+||+|..- .++||.++||++|++|..|++|+|+|+.| +.|+|+|. ...+|+.+.+||+|||+++
T Consensus 750 iLvdvpFA~FFlaKllg~~~~vd~~dL~SlDPeLY~nLifLk~y~gddi~e-L~L~FtVv-~~e~G~~~vVeLkPnGs~i 827 (1001)
T KOG0942|consen 750 ILVDVPFAEFFLAKLLGTSNDVDLHDLASLDPELYKNLIFLKNYNGDDISE-LQLDFTVV-NSELGERQVVELKPNGSKI 827 (1001)
T ss_pred ceecccHHHHHHHHHhCCCCCCChhhhcccCHHHHHHHHHHHhcCCCchhh-ccceEEEe-ccccccceeEEeccCCccc
Confidence 99999999999999999876 99999999999999999999999988875 99999997 5779999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 525 AVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 525 ~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
+||++|+-+||+++++|+||.+|.+|..||++||..||+.+|+. ||++.|||.||+|..
T Consensus 828 ~VTneNvi~YihLVsnY~LN~rir~~c~AFr~Gls~II~~eWl~-MF~~~ELQiLIsG~~ 886 (1001)
T KOG0942|consen 828 RVTNENVIEYIHLVSNYKLNQRIRRQCSAFRKGLSQIISPEWLR-MFNEHELQILISGAE 886 (1001)
T ss_pred eeechhhhhhhHHhhhhHHHHHHHHHHHHHhcchhhcCCHHHHH-hhChhheeeeecCCc
Confidence 99999999999999999999999999999999999999999997 999999999999974
No 5
>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with. E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Probab=100.00 E-value=5.3e-47 Score=399.21 Aligned_cols=214 Identities=45% Similarity=0.793 Sum_probs=198.4
Q ss_pred Cchhcccc-eEEEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCcccccCCchh----hHHHHHHHHHHHHH
Q psy17934 367 NEKDLKKQ-LVVEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSDTQHMWFNQMSFE----SDAQFTLVGIILGL 441 (584)
Q Consensus 367 ~~~~lkk~-L~V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~~~~~~fnp~s~~----~~~~f~liG~l~Gl 441 (584)
+..++|++ |+|+|.||+|+|+|||+||||+++++|+++|++|||+++++++.+|+||.+.. ..++|+++|+++|+
T Consensus 3 ~~~~~~~~~l~V~F~gE~g~d~gG~~rEf~~~l~~el~~~~~~lf~~~~~~~~~~~~p~~~~~~~~~l~~f~~~G~lig~ 82 (336)
T smart00119 3 SDEDLKKSVLEIEFEGEEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPNDYLLYPNPRAFFANPEHLAYFRFIGRVLGK 82 (336)
T ss_pred ChHHhCCCeEEEEECCCCCccCCchHHHHHHHHHHHHhCcccCCceEcCCCCeEEeCCCccccchHHHHHHHHHHHHHHH
Confidence 45789999 99999999999999999999999999999999999999998889999997643 34789999999999
Q ss_pred HHhcCCccCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHH-hhccCCCcccccccceEEEeeCCCCceEEEecCCC
Q psy17934 442 AIYNNIILDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDL-LDYEGQDMEDVFSQTFRICFTDPFGAFISHDLKPD 520 (584)
Q Consensus 442 AI~n~~~l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~L-l~~~~~dvee~~~l~F~~~~~d~~G~~~~~eL~p~ 520 (584)
||+++.+++++||++|||+|+|.+++++||+++||+++++|++| +++++ .+.++++|++...+.+|...++||+||
T Consensus 83 al~~~~~~~l~f~~~f~k~L~~~~~tl~Dl~~~D~~~~~sl~~l~~~~~~---~~~~~l~F~~~~~~~~g~~~~~eL~~~ 159 (336)
T smart00119 83 ALYDNRLLDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLKWLLLNNDT---SEELDLTFSIVLTSEFGQVKVVELKPG 159 (336)
T ss_pred HHHcCCeeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHHhCCC---cccccceEEEEeeecCCCcceEecCCC
Confidence 99999999999999999999999999999999999999999999 55432 345889999776667888889999999
Q ss_pred CCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 521 GDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 521 G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
|++++||.+||++||+++++|+++++++.|++||++||++|+|.+.+. +|+|+||+.+|||.+
T Consensus 160 G~~~~Vt~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~-~f~~~eL~~licG~~ 222 (336)
T smart00119 160 GSNIPVTEENKKEYVHLVIEYRLNKGIEKQLEAFREGFSEVIPENLLR-LFTPEELELLICGSP 222 (336)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCHHHhh-CCCHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999998886 999999999999974
No 6
>KOG4427|consensus
Probab=100.00 E-value=1e-44 Score=390.27 Aligned_cols=312 Identities=28% Similarity=0.502 Sum_probs=259.0
Q ss_pred ccccCCCCCCCCCcccccccccccchhhHHhhhhhhhcccccccccccccccccceeccccccchhHHHHHhhHhHHHHH
Q psy17934 243 NVLDSRKPLIPFLEFYNEPLSDAIEMDRDFGYYRASEELTSETDCASSSRFLKFSFMYYSFILTPATKTLGLYYDSRIRM 322 (584)
Q Consensus 243 n~~~~~~~~ip~~~F~~~~l~~~~~~~~d~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~Pfll~~~~K~~~l~~d~~~~~ 322 (584)
...+||.|+-|...+.++++.. ..+..++..=. +....-....|-+++.+.++.++. ..++-
T Consensus 632 YeRDcRr~Fta~d~WL~pevkP-s~f~~e~ek~~---------------~~a~lll~~mpHviP~edRv~lFR--~fVqk 693 (1096)
T KOG4427|consen 632 YERDCRRPFTASDHWLIPEVKP-SAFAAELEKVL---------------PTADLLLTKMPHVIPHEDRVLLFR--EFVQK 693 (1096)
T ss_pred HHhccCCCCCcchhhcCCCCCh-hHHHHHHHhhc---------------ccceeEeccCCcccChHHHHHHHH--HHHhh
Confidence 3578999999999999998853 23334442211 112334456888888776654432 11110
Q ss_pred HHHHHHHHHHHhhCCC-CCC--ceEEEecCCccHHHHHHHHHHHHccCchhcccceEEEEec-----ccccCCCcchHHH
Q psy17934 323 YSGRRISYLQSVVGQP-TNP--YLRLKVRRDHIIEDALVELEMIAMENEKDLKKQLVVEFEG-----EQGIDEGGVSKEF 394 (584)
Q Consensus 323 ~~~~~~~~~~s~~~~~-~~p--~l~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~V~F~G-----E~GiD~GGv~rEf 394 (584)
+ ++- ..+.+.. .+| ...|.|||++|+||.++|| +......+|..++|+|++ |+|+|.|||+|||
T Consensus 694 --d--Ka~-~~lv~ts~a~p~~~t~IvvrR~rivEDGf~qL---~~l~~~alKs~IrVkFVNeqGl~EAGiDqdGvfKEF 765 (1096)
T KOG4427|consen 694 --D--KAS-RGLVETSDASPARSTEIVVRRGRIVEDGFQQL---NSLGSPALKSVIRVKFVNEQGLDEAGIDQDGVFKEF 765 (1096)
T ss_pred --h--HHh-hcccccccCCccceeEEEEEcccchhhHHHHH---HhccchhhhceEEEEEecccCCcccccCccchHHHH
Confidence 0 111 1111111 122 3579999999999999999 555666899999999986 6688999999999
Q ss_pred HHHHHHHHcCCCCCCeeecCCCCcccccCCchhh---HHHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHhCCCC--ccc
Q psy17934 395 FQLIIEEIFNPDYGMFCVQSDTQHMWFNQMSFES---DAQFTLVGIILGLAIYNNIILDVNFPMVVYKKLMGKRG--SFY 469 (584)
Q Consensus 395 f~ll~~el~~p~~glF~~~~~~~~~~fnp~s~~~---~~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Llg~~~--tl~ 469 (584)
...+.+..|+|.+++|..+...+.+|++|.+... .+.|+|+|+++|+|+|.|+.+|++|+++|..+|||..- .++
T Consensus 766 LeeiiKkvFdp~lnLFstTs~d~~LyPSPts~~~en~lqlfeFvGrmlGKAvYEGIvvDv~fa~vflsqlLG~~~~s~~D 845 (1096)
T KOG4427|consen 766 LEEIIKKVFDPELNLFSTTSTDRRLYPSPTSYHHENHLQLFEFVGRMLGKAVYEGIVVDVPFASVFLSQLLGRHSLSFID 845 (1096)
T ss_pred HHHHHHHHhcccccccccCCCCceecCCchhhhhhchhHHHHHHHHHHHHHHhcceEEecccHHHHHHHHhcccchhhhh
Confidence 9999999999999999999877889999988643 46899999999999999999999999999999999866 789
Q ss_pred cccccChhhhhhHHHHhhccCCCcccccccceEEEeeCCCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHH
Q psy17934 470 DLEDFNPVLFNGLRDLLDYEGQDMEDVFSQTFRICFTDPFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEK 549 (584)
Q Consensus 470 DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l~F~~~~~d~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~ 549 (584)
+|..+||++|++|..+..|+| |+.| +|+||+++ +|.-|...++||+|||+.++||++||-.||+.+++|++|+++..
T Consensus 846 ELs~LDpElYrnLtfvKhYdg-d~~d-L~LtfSvd-edfmGkis~~eL~PgGkt~sVtneNKi~YIH~MA~~rmnrqi~e 922 (1096)
T KOG4427|consen 846 ELSSLDPELYRNLTFVKHYDG-DLKD-LCLTFSVD-EDFMGKISTIELKPGGKTISVTNENKIQYIHAMAHFRMNRQIVE 922 (1096)
T ss_pred hccccCHHHHhhhhHHHhhcc-cHhh-heeeeEec-hhhccceeEEEeccCCcceeccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 8875 99999998 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 550 QFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 550 q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
|..||.+||.+++.+++|+ +|+|.||+.||+|.+
T Consensus 923 qt~Af~rG~rsii~P~Wls-lFs~~elq~LiSG~n 956 (1096)
T KOG4427|consen 923 QTNAFYRGFRSIISPEWLS-LFSPPELQRLISGDN 956 (1096)
T ss_pred HHHHHHHHHHHhcCHHHHH-ccCcHHHHHHhcCCC
Confidence 9999999999999999997 999999999999964
No 7
>KOG0939|consensus
Probab=100.00 E-value=1.7e-45 Score=397.59 Aligned_cols=265 Identities=32% Similarity=0.538 Sum_probs=239.3
Q ss_pred ceeccccccchhHHHHHhhHhHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCccHHHHHHHHHHHHccCchhcccceE
Q psy17934 297 SFMYYSFILTPATKTLGLYYDSRIRMYSGRRISYLQSVVGQPTNPYLRLKVRRDHIIEDALVELEMIAMENEKDLKKQLV 376 (584)
Q Consensus 297 ~~~~~Pfll~~~~K~~~l~~d~~~~~~~~~~~~~~~s~~~~~~~p~l~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~ 376 (584)
...++|-+++...|..+++..-+. .. . ..+.+.+.|+|+.+++|+++++ ...++.++|..+.
T Consensus 333 ll~~~~~ll~F~~Kr~yf~r~L~~-------------~~-~-~~~~~~v~v~R~~v~~~S~~~~---~~~s~~e~~~rl~ 394 (720)
T KOG0939|consen 333 LLLKNPMLLDFDNKRKYFKRELRK-------------EH-A-SSEKLAVLVRRALVLEDSFRAL---LYKSPEELKTRLE 394 (720)
T ss_pred hheecCcceecccHHHHHHHHHHH-------------hh-c-cCCcceEEEeHHHHHHHHHHHH---HhCCHHHHhcceE
Confidence 346889999988888766533221 11 1 1578999999999999999999 6789999999999
Q ss_pred EEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCCC-CcccccCCch---hhHHHHHHHHHHHHHHHhcCCccCcC
Q psy17934 377 VEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSDT-QHMWFNQMSF---ESDAQFTLVGIILGLAIYNNIILDVN 452 (584)
Q Consensus 377 V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~~-~~~~fnp~s~---~~~~~f~liG~l~GlAI~n~~~l~l~ 452 (584)
|.|.||+|+|+|||+||||.+++++||||+|++|+...+. .++.+||+|. ++..+|+|+|+++|+||++|..++.+
T Consensus 395 I~f~gEEg~D~gG~~rEw~~ll~r~ifnp~~alf~~~~~d~tt~~pn~~s~~np~hLs~fkf~GriigKal~d~ql~~c~ 474 (720)
T KOG0939|consen 395 VTFQGEEGSDAGGVTREWLQLLSREIFNPRYALFTTVGSDQTTFHPNPNSYVNPEHLSYFKFVGRIIGKALFDGQLLECY 474 (720)
T ss_pred EEEecccccccchHHHHHHHHHHHHHcCCCcceEEEcCCCceEEeeCCcccCChhhhhHHHhhHHHHHHHHhcchhhhhe
Confidence 9999999999999999999999999999999999997765 5788999854 45678999999999999999999999
Q ss_pred CcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccCCCcccccccceEEEeeCCCCceEEEecCCCCCccccChhhHH
Q psy17934 453 FPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEGQDMEDVFSQTFRICFTDPFGAFISHDLKPDGDNIAVTQENKQ 532 (584)
Q Consensus 453 Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~~l~F~~~~~d~~G~~~~~eL~p~G~~i~VT~~Nk~ 532 (584)
|.+.|||.++|.++++.|++..||+.|+++.+|++ +|+.+.+.++|+.. .|.+|...++||+|||++|.||++||.
T Consensus 475 ftrsfyk~ilG~~v~~~d~es~DP~y~k~l~~il~---ndis~~l~ltfs~e-~~~~g~~~~~eL~p~G~~i~Vt~~nK~ 550 (720)
T KOG0939|consen 475 FTRSFYKHILGLPVTYHDMESADPEYYKSLVWILK---NDISDTLELTFSEE-DDEFGVESVVELKPGGAKIYVTEANKQ 550 (720)
T ss_pred eeHHHHhhccCCceeeeehhhcChHHhhceeehhc---CCcccceeEEEEEe-eccccccceeecccCCCceeeccccHH
Confidence 99999999999999999999999999999999998 46766789999998 588998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 533 EFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 533 eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
|||+++++|+|..+|++|++||..||++++|...+. +|+..|||+||||-+
T Consensus 551 ~yv~lv~q~rL~~~ir~ql~afl~Gl~~iip~~li~-if~E~ELELLisGlp 601 (720)
T KOG0939|consen 551 EYVQLVTQYRLTNSIRKQLDAFLAGLHEIIPKVLLS-IFDEQELELLISGLP 601 (720)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhhHHHHHH-HhhhHHHHHHHcCCC
Confidence 999999999999999999999999999999988775 999999999999963
No 8
>KOG0170|consensus
Probab=100.00 E-value=2.1e-41 Score=354.05 Aligned_cols=308 Identities=27% Similarity=0.377 Sum_probs=246.0
Q ss_pred CCCCCCCcccccccccccchh-hHHhhhhhhhcccccccccccccccccceeccccccchhHHHHHhhHhHHHHHHHHHH
Q psy17934 249 KPLIPFLEFYNEPLSDAIEMD-RDFGYYRASEELTSETDCASSSRFLKFSFMYYSFILTPATKTLGLYYDSRIRMYSGRR 327 (584)
Q Consensus 249 ~~~ip~~~F~~~~l~~~~~~~-~d~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~Pfll~~~~K~~~l~~d~~~~~~~~~~ 327 (584)
..++|.++|.|.+|..++..+ +|-..|....-+.|- .+--..+||+|+.++|..+++..+.-.- +.
T Consensus 131 ~~~vp~sefiNsKLt~Kl~rql~d~l~v~sg~lp~w~----------~~L~~~cpfLfpf~Tr~~~f~~taFg~~-R~-- 197 (621)
T KOG0170|consen 131 KEIVPTSEFINSKLTAKLARQLQDPLVVASGALPDWS----------LFLTRRCPFLFPFDTRMLYFYSTAFGLS-RA-- 197 (621)
T ss_pred hcCCChHHHHHHHhhHHHHHHhcCcceeecCCCChhh----------hhhhhcCCeeccHHHHHHHHHHHHhhhh-hH--
Confidence 457999999999999988765 566666632211110 0111379999999999999887763210 00
Q ss_pred HHHHHHhh-----C--------CCCCCceEEEecCCccHHHHHHHHHHHHccCchhcccceEEEEecccccCCCcchHHH
Q psy17934 328 ISYLQSVV-----G--------QPTNPYLRLKVRRDHIIEDALVELEMIAMENEKDLKKQLVVEFEGEQGIDEGGVSKEF 394 (584)
Q Consensus 328 ~~~~~s~~-----~--------~~~~p~l~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~V~F~GE~GiD~GGv~rEf 394 (584)
....+... + .+.-++-+++|.|+.|++.|++.+++++ .-|..|+|+|.+|.|.+. ||+-||
T Consensus 198 ~~~~k~~s~~~~~~s~~e~~~~~grL~RkK~risR~~Il~sa~kvm~~yg-----ss~~vLEIEY~~EvGTGL-GPTLEF 271 (621)
T KOG0170|consen 198 IQLLKNKSKGSKDGSNDEALQQLGRLTRKKLRISRKTILASALKVMEKYG-----SSKAVLEIEYEEEVGTGL-GPTLEF 271 (621)
T ss_pred HHHHhhcccCCCCCCchHHhHhhcccchhhhhhhHHHHHHHHHHHHHHhc-----CCcceEEEEeccccccCC-Ccceee
Confidence 00111100 0 1123567899999999999999997654 557789999999999999 999999
Q ss_pred HHHHHHHHcCCCCCCeeec----------CCC------CcccccCCc-----hhh---HHHHHHHHHHHHHHHhcCCccC
Q psy17934 395 FQLIIEEIFNPDYGMFCVQ----------SDT------QHMWFNQMS-----FES---DAQFTLVGIILGLAIYNNIILD 450 (584)
Q Consensus 395 f~ll~~el~~p~~glF~~~----------~~~------~~~~fnp~s-----~~~---~~~f~liG~l~GlAI~n~~~l~ 450 (584)
|++|++++.+++.|||+.+ +++ ..+++.|.+ .+. ...|+++|++||+||++|.++|
T Consensus 272 YtlVSk~fq~~sLgmWR~~s~s~~~~k~~~~t~~v~~~sgLFp~P~~~ts~~se~~kvi~~F~~LG~~vAkal~D~Rild 351 (621)
T KOG0170|consen 272 YTLVSKEFQRASLGMWRCNSVSYRSGKPQENTKDVYITSGLFPRPWPPTSNSSENEKVIELFRLLGTFVAKALQDGRILD 351 (621)
T ss_pred HHHHHHHHhhccccccccCceeeccCCCCCCcchhhhccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCceEe
Confidence 9999999999999999985 222 234555532 121 3579999999999999999999
Q ss_pred cCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhc-----------------------cCCCcccccccceEEEeeC
Q psy17934 451 VNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDY-----------------------EGQDMEDVFSQTFRICFTD 507 (584)
Q Consensus 451 l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~-----------------------~~~dvee~~~l~F~~~~~d 507 (584)
+||.++|||.++|+++|..|+..+||+++++|..|... .|..+| +++|+|+++
T Consensus 352 lpls~~Fykl~l~q~Lt~~dv~~vd~~l~~sL~~Le~vv~~k~~~~~~~~d~~~a~~dltl~g~~iE-dL~LdFTLP--- 427 (621)
T KOG0170|consen 352 LPLSKAFYKLILGQELTSHDVTTVDPELAKSLLELELVVPRKKKLEKYIGDVANADDDLTLNGCSIE-DLSLDFTLP--- 427 (621)
T ss_pred eeccHHHHHHHhcCCcccccceecCHHHHHHHHHHHHHhhhhhhhhhhcccccccccceeecCcchh-hceeeEecC---
Confidence 99999999999999999999999999999999988652 122234 689999986
Q ss_pred CCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccC
Q psy17934 508 PFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGS 583 (584)
Q Consensus 508 ~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~ 583 (584)
|. ..+||+|+|++++||..|.+||++.+++|.+.++|.+|++||+.||.+|+|-+.|. +|+|+||..|+||.
T Consensus 428 --G~-p~ieL~p~g~~~~V~~~NleEYi~~VId~tv~kGVqkQleAFr~GF~~VF~~~~Lq-if~p~EL~~llcg~ 499 (621)
T KOG0170|consen 428 --GF-PDIELIPGGANKPVTISNLEEYIHGVIDATVGKGVQKQLEAFRSGFSSVFPYEHLQ-IFTPEELVTLLCGV 499 (621)
T ss_pred --CC-CCeeeccCCCCCccccccHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhccchhhee-ecCHHHHHHHhccc
Confidence 43 36899999999999999999999999999999999999999999999999999997 99999999999995
No 9
>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []. Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....
Probab=100.00 E-value=8.1e-34 Score=297.03 Aligned_cols=187 Identities=39% Similarity=0.655 Sum_probs=164.1
Q ss_pred HHHHHHHcCCCCCCeeecCCCCcccccCCc----------hhhHHHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHh-CC
Q psy17934 396 QLIIEEIFNPDYGMFCVQSDTQHMWFNQMS----------FESDAQFTLVGIILGLAIYNNIILDVNFPMVVYKKLM-GK 464 (584)
Q Consensus 396 ~ll~~el~~p~~glF~~~~~~~~~~fnp~s----------~~~~~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Ll-g~ 464 (584)
++|++|+|+|++|||..+++++.+|+||.. ....++|+++|++||+||++|.+++++||++|||+|+ |.
T Consensus 1 ~l~~~el~~~~~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~lig~ai~~~~~l~~~f~~~~~k~l~~g~ 80 (317)
T PF00632_consen 1 TLLCKELFDPNLGLFYQTSNNGLFWPNPNSNRDSPSPASSEEHLKMFRFLGRLIGKAIRNGIPLPLPFSPAFWKYLLSGE 80 (317)
T ss_dssp HHHHHHHTSGGGSSEESSTTTCEEEEECCH----TTGGGSTTHHHHHHHHHHHHHHHHHTTS-ESSEB-HHHHHHHT-T-
T ss_pred CHHHHHhcCccCCCceEcCCCCEEeCCCcccccccccccCHHHHHHHHHHHHHHHHHHHcCCccccCcCHHHHHHHhcCC
Confidence 589999999999999999999999999862 1345789999999999999999999999999999999 99
Q ss_pred CCccccccccChhhhhhHHHHhhccCC--CcccccccceEEEeeCCCCceEEEecCCCCCccccChhhHHHHHHHHHHHH
Q psy17934 465 RGSFYDLEDFNPVLFNGLRDLLDYEGQ--DMEDVFSQTFRICFTDPFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFL 542 (584)
Q Consensus 465 ~~tl~DL~~~dp~l~~sL~~Ll~~~~~--dvee~~~l~F~~~~~d~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~ 542 (584)
+++++|++++||+++++|++|++++.+ +++ .++++|+++..+..|...++||+|||++++||.+||++||+++++|+
T Consensus 81 ~~t~~Dl~~iD~~~~~sl~~l~~~~~~~~~~~-~l~l~F~~~~~~~~~~~~~~eL~~~G~~~~Vt~~N~~eyv~~~~~~~ 159 (317)
T PF00632_consen 81 PLTLEDLEEIDPELYKSLKKLLDMDNDEEDVE-DLDLTFSVPSSSGGGQVEEVELIPGGSNIPVTNENKEEYVRLLAQYR 159 (317)
T ss_dssp ---HHHHHCCSHHHHHHHHHHHHSHSGSCTTS-GCTEBSEEEEEECTTEEEEEESSTTGGGSB-TTTTHHHHHHHHHHHH
T ss_pred CCccccchhcCchhhcchhhheecccccccee-ecceEEEEecccccCceeEeeecCCCcccccchhhhhHHHHhhhhhh
Confidence 999999999999999999999977542 344 48999998765666777889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccCC
Q psy17934 543 LNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGSN 584 (584)
Q Consensus 543 l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~~ 584 (584)
++++++.|++||++||.+|+|...+. +|+|+||+.++||+.
T Consensus 160 l~~~~~~~~~~~r~Gf~~vi~~~~l~-~f~~~eL~~l~~G~~ 200 (317)
T PF00632_consen 160 LNESVKKQLEAFRKGFYSVIPLELLS-LFSPEELERLLCGSP 200 (317)
T ss_dssp HTTTTHHHHHHHHHHHHHHSSHHHHT-TSSHHHHHHHHHCBS
T ss_pred cccccchhHHHHhcchhhcchhHHHH-cCCHHHHHHHhcCcc
Confidence 99999999999999999999999886 999999999999974
No 10
>KOG0940|consensus
Probab=99.96 E-value=6.7e-31 Score=275.28 Aligned_cols=232 Identities=33% Similarity=0.560 Sum_probs=214.6
Q ss_pred CceEEEecCCccHHHHHHHHHHHHccCchhcccceEEEEecccccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCccc
Q psy17934 341 PYLRLKVRRDHIIEDALVELEMIAMENEKDLKKQLVVEFEGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFCVQSDTQHMW 420 (584)
Q Consensus 341 p~l~l~VrR~~il~dal~~l~~~~~~~~~~lkk~L~V~F~GE~GiD~GGv~rEff~ll~~el~~p~~glF~~~~~~~~~~ 420 (584)
..+.++|+|++++||+++++ -..++.++|+.+.+.|.||+|.|.||+.||||.+++.|+|+|-+|+|.++.+..+.|
T Consensus 15 ~~~~~~~~~~~~~e~~f~~i---M~~~~~~~~~~l~~~~~~ee~ldy~glprewf~~lS~e~~~p~~~~~~~~~~~~tlq 91 (358)
T KOG0940|consen 15 QQSHHKVDRDHLLEDSFNQI---MNPKPSDLQKRLMREFKGEEGLDYGGLPREWFFLLSHEGFNPWYGLFQHSRKDYTLW 91 (358)
T ss_pred ceeEEEechhhhHHHHHHHH---hCCCchhhhhcceeecccccccccCCCCcceeeeeccccCCcceeeeeecccccccc
Confidence 46889999999999999999 566788899999999999999999999999999999999999999999988757899
Q ss_pred ccCCch---hhHHHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccCCCccccc
Q psy17934 421 FNQMSF---ESDAQFTLVGIILGLAIYNNIILDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEGQDMEDVF 497 (584)
Q Consensus 421 fnp~s~---~~~~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~~dvee~~ 497 (584)
.+|.+. +...+|.|+|+.+|+|++++..++.- -..|||.+++++++++|.+.+|++.|+++.++++. |...
T Consensus 92 ~~P~sg~~p~~l~~~~~vg~~~~l~~~h~~~~~~g-~r~F~~~i~~ktt~ldd~e~~d~e~~~s~~~~~en---~~~~-- 165 (358)
T KOG0940|consen 92 LNPRSGVNPGHLTYFRFVGGVLALAGWHMRFTDTG-QRPFYKHILKKTTTLDDREAVDPEFYNSLTWIREN---DPTN-- 165 (358)
T ss_pred cCCccCCCCCcccccccccccccccceeeEecCCC-ceehhhhhhcCccccCchhhcCccccccccccccC---Cccc--
Confidence 999876 34578999999999999999999988 99999999999999999999999999999999985 3433
Q ss_pred ccceEEEeeCCCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHh
Q psy17934 498 SQTFRICFTDPFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIE 577 (584)
Q Consensus 498 ~l~F~~~~~d~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe 577 (584)
+++|.++ ...+|...+.+|+|+|.++.||.+|+++||.++++ ++...+..|..+|.+||..+.|...+. .|.+.|++
T Consensus 166 ~~~f~~~-~~~~g~~~~~~l~p~g~~~~v~~~n~~~yi~~l~~-r~~~~~~~q~~~l~~~~~~~~p~~~~~-~~~e~~~e 242 (358)
T KOG0940|consen 166 DLTFSVE-SEVLGQITTQELKPNGANIQVTEENKKEYIMLLQN-RFERGIQEQLKALLQGFNELLPQSLLR-IFDEMELE 242 (358)
T ss_pred chhhhcc-hhhcCCccceeecCCCcccccccccHHHHHHHHHH-HHHHHHHHHHHHHhccccccCCccccc-ccchhhHH
Confidence 8999998 58899999999999999999999999999999999 888999999999999999999988776 99999999
Q ss_pred hccccCC
Q psy17934 578 QLVCGSN 584 (584)
Q Consensus 578 ~li~G~~ 584 (584)
.++||..
T Consensus 243 ~~~~~~~ 249 (358)
T KOG0940|consen 243 LALSGDP 249 (358)
T ss_pred HHhcCCc
Confidence 9999963
No 11
>KOG0943|consensus
Probab=99.81 E-value=1.5e-19 Score=201.60 Aligned_cols=152 Identities=28% Similarity=0.463 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHhcCCccCcCCcHHHHHHHhCCCCccccccccChhhhhhHHHHhhccC-CCccc---ccccceEEEe
Q psy17934 430 AQFTLVGIILGLAIYNNIILDVNFPMVVYKKLMGKRGSFYDLEDFNPVLFNGLRDLLDYEG-QDMED---VFSQTFRICF 505 (584)
Q Consensus 430 ~~f~liG~l~GlAI~n~~~l~l~Fp~~~yK~Llg~~~tl~DL~~~dp~l~~sL~~Ll~~~~-~dvee---~~~l~F~~~~ 505 (584)
.-|+-||+++|+|+..|-+.++.|...+||.|||.++.+.|+..+||.++.+|+.|..... .|... .+.+.|....
T Consensus 2743 aafRniGRIlGiCL~Qgdi~PirfnRHifk~iL~l~icW~Df~FfDPVlfenLRaLfkAhpsSd~DadFS~md~aa~gdl 2822 (3015)
T KOG0943|consen 2743 AAFRNIGRILGICLLQGDICPIRFNRHIFKVILGLKICWHDFAFFDPVLFENLRALFKAHPSSDADADFSAMDLAAAGDL 2822 (3015)
T ss_pred HHHHhhhhHhhhhhhcCcccceeehhHHHHHHhcCceehhhhccccHHHHHHHHHHHhcCCcccccchhhHHHHhhccch
Confidence 4599999999999999999999999999999999999999999999999999999986432 12211 2344444432
Q ss_pred eCCCCceEEEecCCCCCccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhcCCCHHHHhhccccC
Q psy17934 506 TDPFGAFISHDLKPDGDNIAVTQENKQEFIDLYSDFLLNTSIEKQFKAFRRGFQMVTDESPLSLLFRPEEIEQLVCGS 583 (584)
Q Consensus 506 ~d~~G~~~~~eL~p~G~~i~VT~~Nk~eyV~l~v~~~l~~~v~~q~~aF~~GF~~Vi~~~~L~~lF~p~ELe~li~G~ 583 (584)
...-| ..+|+|||||.+|+||.+|+-|||.+|+++++...-...|+|+|+|+..|+|.+.|. =++|+++.++|||.
T Consensus 2823 ckee~-a~qVeL~PNGdeilVnkdNViEYV~KYAE~~llgk~~i~feAiReGiLDViPenmL~-~LT~EDfRLiicG~ 2898 (3015)
T KOG0943|consen 2823 CKEEG-AGQVELIPNGDEILVNKDNVIEYVRKYAEHRLLGKAEIPFEAIREGILDVIPENMLE-DLTAEDFRLIICGC 2898 (3015)
T ss_pred hhhcC-ceeEEEecCCceeeecchhHHHHHHHHHHhhhheeeeccHHHHHHhHHhhcchhhhc-ccCHhHheeeeecc
Confidence 11223 347899999999999999999999999999998877788999999999999999886 78999999999995
No 12
>KOG0941|consensus
Probab=94.97 E-value=0.037 Score=63.63 Aligned_cols=174 Identities=20% Similarity=0.190 Sum_probs=115.2
Q ss_pred CCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccchhhhhhc
Q psy17934 23 GDSPSSLSNG---DLDTELTLDIKSVRRAYEQLFALPSSEFEHTLVQALVTLSEYINVQLRCGSSLLSTDSLINVFLVIF 99 (584)
Q Consensus 23 ~~~~~~~~~~---~~~~~~~VDl~~ar~~f~~L~~~~~~~i~~~i~~al~~Ll~~L~~~l~~~~~~~~~~e~LriflIL~ 99 (584)
...+|+.++. ..+..+-+|+..-++..-.+...+.... ..+.+++..+++++............+.....-..+--
T Consensus 196 ~~~~~~~~~d~~n~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~~llss~a~~~~s~l~k~~~~~~~c~~~~~~ 274 (850)
T KOG0941|consen 196 KGENSQGDNDLSNLNPSDHYVDLIAERRVALLLKKLEKGDN-TAILNAIELLLSSLACDNTSFLDKSRDCNVFCSFQIHG 274 (850)
T ss_pred ecccccccchhhhcCCcccceechhhhhHHHHHhhcccchH-HHHHHHHHHHhhhHhhccchhhhhhhccccccceeccc
Confidence 3445665544 6777888999999999888876655333 33556666555555322211000000111111111111
Q ss_pred cCcCCCCCcchhhhHHHHHHHHhcCChHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccCCCCccc-cccCcccchh
Q psy17934 100 EIPSLGGCDYVERALPKICKAASQLPLTAQARIARIWAAHCKQRLKTILEALQQLITIKTISNHYHKDY-ILQDEETITL 178 (584)
Q Consensus 100 E~P~~~~~~~~~~l~~~f~~ai~~L~~~~~~~L~~wWs~l~~~~f~rlV~~~kq~It~~l~~~~~~~~~-~~~~d~~i~~ 178 (584)
.+--...+.|.+-..|.+|++...|+...++.|.+-||+++++.....+..+++.+++.+.+..+.... ...++..+.+
T Consensus 275 ld~~~~~~~f~~l~~~~~~~~~~~l~~~~~~~L~~~~s~~~~d~e~~~i~l~l~~~~~~~~s~~~~s~~vp~~~~i~~~~ 354 (850)
T KOG0941|consen 275 LDLNLARPAFLELTLPLFCKILSELLVAIQKRLIRLWSKYPADQEALYILLLLPLIPLNVLSNEYNSLNVPFADAICIVA 354 (850)
T ss_pred ccHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhCCcHHHHHHHHHHcccchHHHHHHHHHhccCcHHHHHHHhh
Confidence 111122335666677899999999999999999999999999999999999999999999877653322 2456667777
Q ss_pred hhHHHHHHHHHhhhcCCCC
Q psy17934 179 PTKIMRILFYANILAGDLD 197 (584)
Q Consensus 179 a~k~l~~l~~an~~~~~~~ 197 (584)
..+.+++.++||++..+..
T Consensus 355 ~~~~~~l~~~~~~~~~k~~ 373 (850)
T KOG0941|consen 355 ENKRLKLVEYWNQLSPKYF 373 (850)
T ss_pred cchHHHHHHHHHHhchhhc
Confidence 7788899999999876654
No 13
>PF09301 DUF1970: Domain of unknown function (DUF1970); InterPro: IPR015380 This entry is represented by Bacteriophage PRD1, P16; it is a family of uncharacterised viral proteins.; PDB: 1W8X_P.
Probab=28.21 E-value=19 Score=30.37 Aligned_cols=18 Identities=50% Similarity=0.791 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCCCCCCC
Q psy17934 7 TQYTSPPPTLPSTEGSGD 24 (584)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (584)
..||||.||+|...||-.
T Consensus 56 agytspsptlpnrnrscg 73 (117)
T PF09301_consen 56 AGYTSPSPTLPNRNRSCG 73 (117)
T ss_dssp ------------------
T ss_pred ccccCCCCCCCCCCCCCC
Confidence 469999999999988743
No 14
>KOG0742|consensus
Probab=20.76 E-value=2.5e+02 Score=31.16 Aligned_cols=22 Identities=23% Similarity=0.237 Sum_probs=17.9
Q ss_pred CCCCHHHHHHHHHHHHcCCChh
Q psy17934 38 LTLDIKSVRRAYEQLFALPSSE 59 (584)
Q Consensus 38 ~~VDl~~ar~~f~~L~~~~~~~ 59 (584)
.|.|-.++.|+=+.|.++.+..
T Consensus 71 ~gFDpeaLERaAKAlrein~s~ 92 (630)
T KOG0742|consen 71 SGFDPEALERAAKALREINHSP 92 (630)
T ss_pred cCCChHHHHHHHHHHHhhccCc
Confidence 3899999999999998776543
Done!