AmiGO: BLAST Results


BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.3e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Bos taurus	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Canis lupus familiaris	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Sus scrofa	1.6e-45
BLAST match view associations BLAST with Rps3 Rps3 Rps3 ribosomal protein S3	protein from Mus musculus	1.6e-45
BLAST match view associations BLAST with Rps3 Rps3 Rps3 ribosomal protein S3	gene from Rattus norvegicus	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Pongo abelii	4.4e-45
BLAST match view associations BLAST with rps3 rps3 rps3 ribosomal protein S3	gene_product from Danio rerio	4.4e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 Uncharacterized protein	protein from Gallus gallus	5.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.4e-44
BLAST match view associations BLAST with RpS3 RpS3 RpS3 Ribosomal protein S3	protein from Drosophila melanogaster	2.8e-43
BLAST match view associations BLAST with AT5G35530 AT5G35530 AT5G35530	protein from Arabidopsis thaliana	2.8e-43
BLAST match view associations BLAST with AT2G31610 AT2G31610 AT2G31610	protein from Arabidopsis thaliana	2.5e-42
BLAST match view associations BLAST with AT3G53870 AT3G53870 AT3G53870	protein from Arabidopsis thaliana	2.5e-42
BLAST match view associations BLAST with RGD1560831 RGD1560831 RGD1560831 similar to 40S ribosomal protein S3	gene from Rattus norvegicus	3.2e-42
BLAST match view associations BLAST with rps-3 rps-3 rps-3	gene from Caenorhabditis elegans	2.6e-40
BLAST match view associations BLAST with PF14_0627 PF14_0627 PF14_0627 ribosomal protein S3, putative	gene from Plasmodium falciparum	1.3e-36
BLAST match view associations BLAST with PF14_0627 PF14_0627 PF14_0627 40S ribosomal protein S3, putative	protein from Plasmodium falciparum 3D7	1.3e-36
BLAST match view associations BLAST with RPS3 RPS3 RPS3 Protein component of the small (40S) ribosomal subunit	gene from Saccharomyces cerevisiae	2.7e-36
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	3.5e-36
BLAST match view associations BLAST with MGG_05673 MGG_05673 MGG_05673 40S ribosomal protein S3	protein from Magnaporthe oryzae 70-15	1.2e-35
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	6.5e-35
BLAST match view associations BLAST with rps3 rps3 rps3 40S ribosomal protein S3	gene from Dictyostelium discoideum	1.8e-30
BLAST match view associations BLAST with RPS3 RPS3 RPS3	gene_product from Candida albicans	3.8e-30
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.7e-29
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.7e-29
BLAST match view associations BLAST with D4AAX0 D4AAX0 D4AAX0 Uncharacterized protein	protein from Rattus norvegicus	3.4e-29
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.5e-26
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Sus scrofa	1.5e-26
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	8.8e-16
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17938
        (307 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|H0YCJ7 - symbol:RPS3 "40S ribosomal protein S3"...   479  1.3e-45   1
UNIPROTKB|F1N9X5 - symbol:RPS3 "Uncharacterized protein" ...   478  1.6e-45   1
UNIPROTKB|Q3T169 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
UNIPROTKB|E2RH47 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
UNIPROTKB|E9PL45 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
UNIPROTKB|F2Z2S8 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
UNIPROTKB|P23396 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
UNIPROTKB|Q0Z8U2 - symbol:RPS3 "40S ribosomal protein S3"...   478  1.6e-45   1
MGI|MGI:1350917 - symbol:Rps3 "ribosomal protein S3" spec...   478  1.6e-45   1
RGD|619888 - symbol:Rps3 "ribosomal protein S3" species:1...   478  1.6e-45   1
UNIPROTKB|Q5R465 - symbol:RPS3 "40S ribosomal protein S3"...   474  4.4e-45   1
ZFIN|ZDB-GENE-030131-8494 - symbol:rps3 "ribosomal protei...   474  4.4e-45   1
UNIPROTKB|F1NPA9 - symbol:RPS3 "Uncharacterized protein" ...   473  5.6e-45   1
UNIPROTKB|H0YF32 - symbol:RPS3 "40S ribosomal protein S3"...   467  2.4e-44   1
FB|FBgn0002622 - symbol:RpS3 "Ribosomal protein S3" speci...   457  2.8e-43   1
TAIR|locus:2169518 - symbol:AT5G35530 species:3702 "Arabi...   457  2.8e-43   1
TAIR|locus:2065863 - symbol:AT2G31610 species:3702 "Arabi...   448  2.5e-42   1
TAIR|locus:2084490 - symbol:AT3G53870 species:3702 "Arabi...   448  2.5e-42   1
RGD|1560831 - symbol:RGD1560831 "similar to 40S ribosomal...   447  3.2e-42   1
UNIPROTKB|J3KN86 - symbol:RPS3 "40S ribosomal protein S3"...   439  2.2e-41   1
WB|WBGene00004472 - symbol:rps-3 species:6239 "Caenorhabd...   429  2.6e-40   1
POMBASE|SPBC16G5.14c - symbol:rps3 "40S ribosomal protein...   424  8.7e-40   1
GENEDB_PFALCIPARUM|PF14_0627 - symbol:PF14_0627 "ribosoma...   394  1.3e-36   1
UNIPROTKB|Q8IKH8 - symbol:PF14_0627 "40S ribosomal protei...   394  1.3e-36   1
SGD|S000005122 - symbol:RPS3 "Protein component of the sm...   391  2.7e-36   1
UNIPROTKB|E9PL09 - symbol:RPS3 "40S ribosomal protein S3"...   390  3.5e-36   1
UNIPROTKB|G4MP11 - symbol:MGG_05673 "40S ribosomal protei...   385  1.2e-35   1
UNIPROTKB|E9PPU1 - symbol:RPS3 "40S ribosomal protein S3"...   378  6.5e-35   1
ASPGD|ASPL0000016707 - symbol:AN4087 species:162425 "Emer...   367  9.5e-34   1
DICTYBASE|DDB_G0293000 - symbol:rps3 "40S ribosomal prote...   336  1.8e-30   1
CGD|CAL0001259 - symbol:RPS3 species:5476 "Candida albica...   333  3.8e-30   1
UNIPROTKB|E9PJH4 - symbol:RPS3 "40S ribosomal protein S3"...   325  2.7e-29   1
UNIPROTKB|E9PQ96 - symbol:RPS3 "40S ribosomal protein S3"...   325  2.7e-29   1
UNIPROTKB|D4AAX0 - symbol:D4AAX0 "Uncharacterized protein...   324  3.4e-29   1
UNIPROTKB|E9PK82 - symbol:RPS3 "40S ribosomal protein S3"...   299  1.5e-26   1
UNIPROTKB|F1SUM7 - symbol:RPS3 "40S ribosomal protein S3"...   299  1.5e-26   1
UNIPROTKB|H0YEU2 - symbol:RPS3 "40S ribosomal protein S3"...   198  8.8e-16   1


>UNIPROTKB|H0YCJ7 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
            SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            PRIDE:H0YCJ7 Ensembl:ENST00000526248 Bgee:H0YCJ7 Uniprot:H0YCJ7
        Length = 135

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 95/118 (80%), Positives = 107/118 (90%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:     7 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 66

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRY-PAIDAQYC 120
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR  P     +C
Sbjct:    67 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRVGPKAARLWC 124


>UNIPROTKB|F1N9X5 [details] [associations]
            symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
            "damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
            lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
            "induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
            [GO:0045738 "negative regulation of DNA repair" evidence=IEA]
            [GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
            GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
            GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
            GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
            InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
            GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
            EMBL:AADN02055154 IPI:IPI00602924 PRIDE:F1N9X5
            Ensembl:ENSGALT00000036364 ArrayExpress:F1N9X5 Uniprot:F1N9X5
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|Q3T169 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9913 "Bos
            taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
            [GO:0051059 "NF-kappaB binding" evidence=IEA] [GO:0045738 "negative
            regulation of DNA repair" evidence=IEA] [GO:0032587 "ruffle
            membrane" evidence=IEA] [GO:0032088 "negative regulation of
            NF-kappaB transcription factor activity" evidence=IEA] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0006919 "activation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0004519 "endonuclease
            activity" evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic
            site) lyase activity" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
            GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
            GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0030529
            GO:GO:0032587 GO:GO:0004519 GO:GO:0032088 GO:GO:0003906
            Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
            HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 EMBL:BC102090
            IPI:IPI00685601 RefSeq:NP_001029219.1 UniGene:Bt.15460
            ProteinModelPortal:Q3T169 SMR:Q3T169 STRING:Q3T169 PRIDE:Q3T169
            Ensembl:ENSBTAT00000003962 GeneID:326588 KEGG:bta:326588 CTD:6188
            GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195 InParanoid:Q3T169
            OMA:CNDYVET OrthoDB:EOG4GXFNJ NextBio:20809658 ArrayExpress:Q3T169
            GO:GO:0045738 Uniprot:Q3T169
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|E2RH47 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9615 "Canis
            lupus familiaris" [GO:0051059 "NF-kappaB binding" evidence=IEA]
            [GO:0045738 "negative regulation of DNA repair" evidence=IEA]
            [GO:0032587 "ruffle membrane" evidence=IEA] [GO:0032088 "negative
            regulation of NF-kappaB transcription factor activity"
            evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0006919 "activation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=IEA] [GO:0006917 "induction
            of apoptosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003906
            "DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] [GO:0003684 "damaged DNA
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
            SMART:SM00322 GO:GO:0005634 GO:GO:0006917 GO:GO:0003684
            GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
            GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
            GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627
            SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821 PDB:2ZKQ
            PDBsum:2ZKQ KO:K02985 TIGRFAMs:TIGR01008 CTD:6188
            GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
            RefSeq:XP_534008.1 ProteinModelPortal:E2RH47 SMR:E2RH47
            PRIDE:E2RH47 Ensembl:ENSCAFT00000008686 GeneID:476804
            KEGG:cfa:476804 EvolutionaryTrace:E2RH47 NextBio:20852408
            Uniprot:E2RH47
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|E9PL45 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
            GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
            Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            IPI:IPI00978911 ProteinModelPortal:E9PL45 SMR:E9PL45 PRIDE:E9PL45
            Ensembl:ENST00000530689 ArrayExpress:E9PL45 Bgee:E9PL45
            Uniprot:E9PL45
        Length = 164

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|F2Z2S8 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
            GO:GO:0005737 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            IPI:IPI00979604 ProteinModelPortal:F2Z2S8 SMR:F2Z2S8 PRIDE:F2Z2S8
            Ensembl:ENST00000530164 UCSC:uc001owg.3 ArrayExpress:F2Z2S8
            Bgee:F2Z2S8 Uniprot:F2Z2S8
        Length = 117

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|P23396 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003735 "structural constituent of ribosome"
            evidence=NAS;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=IDA] [GO:0045738 "negative regulation of DNA repair"
            evidence=IMP] [GO:0032088 "negative regulation of NF-kappaB
            transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0004519 "endonuclease activity" evidence=IMP]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006917 "induction of apoptosis"
            evidence=IDA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IDA]
            [GO:0051536 "iron-sulfur cluster binding" evidence=NAS] [GO:0006412
            "translation" evidence=IC;NAS;TAS] [GO:0006413 "translational
            initiation" evidence=NAS;TAS] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0051059 "NF-kappaB binding" evidence=IPI]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEP]
            [GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003906
            "DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
            evidence=IDA;TAS] [GO:0032587 "ruffle membrane" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=TAS] [GO:0006414 "translational elongation"
            evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
            [GO:0006614 "SRP-dependent cotranslational protein targeting to
            membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019058 "viral infectious cycle"
            evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
            [GO:0044267 "cellular protein metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
            SMART:SM00322 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006917
            GO:GO:0000184 GO:GO:0003684 GO:GO:0006413 EMBL:CH471076
            GO:GO:0003729 GO:GO:0006974 GO:GO:0051536 GO:GO:0006919
            GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
            GO:GO:0003906 GO:GO:0006415 Gene3D:3.30.300.20 InterPro:IPR015946
            GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF54814
            GO:GO:0006614 GO:GO:0019083 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ GO:GO:0045738
            ChiTaRS:RpS3 EMBL:U14990 EMBL:U14991 EMBL:U14992 EMBL:X55715
            EMBL:S42658 EMBL:AB061838 EMBL:AY791291 EMBL:AK313051 EMBL:BC003137
            EMBL:BC003577 EMBL:BC013196 EMBL:BC034149 EMBL:BC071917
            EMBL:BC100284 EMBL:L16016 EMBL:AB062288 IPI:IPI00011253 PIR:A41247
            RefSeq:NP_000996.2 RefSeq:NP_001243731.1 RefSeq:NP_001247436.1
            UniGene:Hs.546286 UniGene:Hs.740358 PDB:1WH9 PDBsum:1WH9
            ProteinModelPortal:P23396 SMR:P23396 IntAct:P23396
            MINT:MINT-4999144 STRING:P23396 PhosphoSite:P23396 DMDM:417719
            PaxDb:P23396 PeptideAtlas:P23396 PRIDE:P23396 DNASU:6188
            Ensembl:ENST00000524851 Ensembl:ENST00000527446
            Ensembl:ENST00000531188 GeneID:6188 KEGG:hsa:6188 UCSC:uc001owh.3
            GeneCards:GC11P075110 HGNC:HGNC:10420 MIM:600454 neXtProt:NX_P23396
            PharmGKB:PA34829 InParanoid:P23396 PhylomeDB:P23396
            EvolutionaryTrace:P23396 GenomeRNAi:6188 NextBio:24029
            ArrayExpress:P23396 Bgee:P23396 CleanEx:HS_RPS3
            Genevestigator:P23396 GermOnline:ENSG00000149273 Uniprot:P23396
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|Q0Z8U2 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
            scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
            InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
            GO:GO:0003735 GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ EMBL:DQ660373
            RefSeq:NP_001038066.1 UniGene:Ssc.53888 ProteinModelPortal:Q0Z8U2
            SMR:Q0Z8U2 STRING:Q0Z8U2 PRIDE:Q0Z8U2 GeneID:733671 KEGG:ssc:733671
            Uniprot:Q0Z8U2
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>MGI|MGI:1350917 [details] [associations]
            symbol:Rps3 "ribosomal protein S3" species:10090 "Mus
            musculus" [GO:0003684 "damaged DNA binding" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=ISO] [GO:0003735 "structural constituent of ribosome"
            evidence=ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
            lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006917
            "induction of apoptosis" evidence=ISO] [GO:0006919 "activation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=ISO] [GO:0012505 "endomembrane system" evidence=ISO]
            [GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
            ribosomal subunit" evidence=ISO] [GO:0030425 "dendrite"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=ISO] [GO:0032587 "ruffle membrane" evidence=ISO]
            [GO:0045738 "negative regulation of DNA repair" evidence=ISO]
            [GO:0051059 "NF-kappaB binding" evidence=ISO] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 MGI:MGI:1350917
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006917 GO:GO:0003684
            GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
            GO:GO:0003735 GO:GO:0030529 GO:GO:0032587 GO:GO:0004519
            GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946
            GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            CTD:6188 HOVERGEN:HBG002195 OMA:CNDYVET OrthoDB:EOG4GXFNJ
            GO:GO:0045738 ChiTaRS:RpS3 EMBL:X76772 EMBL:BC010721
            IPI:IPI00134599 PIR:S41170 RefSeq:NP_036182.1 UniGene:Mm.236868
            ProteinModelPortal:P62908 SMR:P62908 IntAct:P62908 STRING:P62908
            PhosphoSite:P62908 PaxDb:P62908 PRIDE:P62908
            Ensembl:ENSMUST00000032998 GeneID:27050 KEGG:mmu:27050
            InParanoid:P62908 NextBio:304983 Bgee:P62908 CleanEx:MM_RPS3
            Genevestigator:P62908 GermOnline:ENSMUSG00000030744 Uniprot:P62908
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>RGD|619888 [details] [associations]
            symbol:Rps3 "ribosomal protein S3" species:10116 "Rattus
            norvegicus" [GO:0003684 "damaged DNA binding" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=ISO] [GO:0003735 "structural constituent of ribosome"
            evidence=IC;ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
            lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
            [GO:0006412 "translation" evidence=IC] [GO:0006917 "induction of
            apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISO]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0012505 "endomembrane system" evidence=IDA] [GO:0019901
            "protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
            ribosomal subunit" evidence=ISO;IDA] [GO:0030425 "dendrite"
            evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
            transcription factor activity" evidence=ISO] [GO:0032587 "ruffle
            membrane" evidence=ISO] [GO:0045738 "negative regulation of DNA
            repair" evidence=ISO] [GO:0051059 "NF-kappaB binding" evidence=ISO]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
            SMART:SM00322 RGD:619888 GO:GO:0006412 GO:GO:0030425 GO:GO:0012505
            GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
            GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            CTD:6188 GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195
            OMA:CNDYVET OrthoDB:EOG4GXFNJ EMBL:X51536 EMBL:BC088450
            IPI:IPI00212776 PIR:S13882 RefSeq:NP_001009239.1 UniGene:Rn.127805
            ProteinModelPortal:P62909 SMR:P62909 IntAct:P62909 STRING:P62909
            PhosphoSite:P62909 PRIDE:P62909 Ensembl:ENSRNOT00000023935
            GeneID:140654 KEGG:rno:140654 UCSC:RGD:619888 InParanoid:P62909
            NextBio:620608 Genevestigator:P62909 GermOnline:ENSRNOG00000017418
            Uniprot:P62909
        Length = 243

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 93/108 (86%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|Q5R465 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9601 "Pongo
            abelii" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
            SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
            GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
            GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
            TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195 EMBL:CR861393
            RefSeq:NP_001127020.1 UniGene:Pab.18462 ProteinModelPortal:Q5R465
            PRIDE:Q5R465 GeneID:100174045 KEGG:pon:100174045 InParanoid:Q5R465
            Uniprot:Q5R465
        Length = 243

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 92/108 (85%), Positives = 104/108 (96%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G++ELYAE+VATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRR 117


>ZFIN|ZDB-GENE-030131-8494 [details] [associations]
            symbol:rps3 "ribosomal protein S3" species:7955
            "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
            SMART:SM00322 ZFIN:ZDB-GENE-030131-8494 GO:GO:0006412 GO:GO:0003723
            GO:GO:0009790 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195
            EMBL:BC045902 IPI:IPI00507986 RefSeq:NP_957447.1 UniGene:Dr.65656
            ProteinModelPortal:Q7ZVD9 SMR:Q7ZVD9 STRING:Q7ZVD9 GeneID:336550
            KEGG:dre:336550 InParanoid:Q7ZVD9 NextBio:20811799
            ArrayExpress:Q7ZVD9 Uniprot:Q7ZVD9
        Length = 245

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 92/108 (85%), Positives = 103/108 (95%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFV+DG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G +ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>UNIPROTKB|F1NPA9 [details] [associations]
            symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
            "damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
            lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
            "induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
            [GO:0045738 "negative regulation of DNA repair" evidence=IEA]
            [GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
            GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
            GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
            GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
            InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
            GeneTree:ENSGT00390000008610 GO:GO:0045738 EMBL:AADN02055154
            IPI:IPI00822610 Ensembl:ENSGALT00000028006 ArrayExpress:F1NPA9
            Uniprot:F1NPA9
        Length = 211

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 92/107 (85%), Positives = 103/107 (96%)

Query:     5 FVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELT 64
             FVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIRELT
Sbjct:     1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60

Query:    65 SVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             +VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 107


>UNIPROTKB|H0YF32 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
            SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            PRIDE:H0YF32 Ensembl:ENST00000530170 Bgee:H0YF32 Uniprot:H0YF32
        Length = 123

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/106 (85%), Positives = 102/106 (96%)

Query:     6 VADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTS 65
             VADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIRELT+
Sbjct:     2 VADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTA 61

Query:    66 VVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    62 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 107


>FB|FBgn0002622 [details] [associations]
            symbol:RpS3 "Ribosomal protein S3" species:7227 "Drosophila
            melanogaster" [GO:0016363 "nuclear matrix" evidence=IDA]
            [GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
            evidence=NAS;IDA] [GO:0005634 "nucleus" evidence=NAS;IDA]
            [GO:0006281 "DNA repair" evidence=IGI;NAS] [GO:0008534 "oxidized
            purine nucleobase lesion DNA N-glycosylase activity" evidence=IDA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
            [GO:0003735 "structural constituent of ribosome"
            evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
            [GO:0005737 "cytoplasm" evidence=NAS] [GO:0005840 "ribosome"
            evidence=IDA;NAS] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 EMBL:AE014297
            GO:GO:0005875 GO:GO:0007067 GO:GO:0005811 GO:GO:0006412
            GO:GO:0006281 GO:GO:0043524 GO:GO:0003723 GO:GO:0005840
            GO:GO:0003735 GO:GO:0090305 GO:GO:0004519 GO:GO:0016363
            Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0008534 SUPFAM:SSF54814
            GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
            KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 GeneTree:ENSGT00390000008610
            OMA:CNDYVET EMBL:L13690 EMBL:X72921 EMBL:AY118971 PIR:S35620
            RefSeq:NP_476632.1 UniGene:Dm.20234 ProteinModelPortal:Q06559
            SMR:Q06559 DIP:DIP-17168N IntAct:Q06559 MINT:MINT-812597
            STRING:Q06559 PaxDb:Q06559 PRIDE:Q06559 EnsemblMetazoa:FBtr0084410
            GeneID:42761 KEGG:dme:Dmel_CG6779 FlyBase:FBgn0002622
            InParanoid:Q06559 OrthoDB:EOG4SQVCP PhylomeDB:Q06559 ChiTaRS:RpS3
            GenomeRNAi:42761 NextBio:830438 Bgee:Q06559 GermOnline:CG6779
            Uniprot:Q06559
        Length = 246

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 90/108 (83%), Positives = 100/108 (92%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFV+DG+F+AEL+EFLTRELAEDGYSGVE+R TP+RTEIIIMAT+TQ VLG+KGRRIREL
Sbjct:    12 KFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIREL 71

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T++VQKRF F  G IELYAEKVA RGLCAIAQAESLRYKL GGLAVRR
Sbjct:    72 TAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRR 119


>TAIR|locus:2169518 [details] [associations]
            symbol:AT5G35530 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
            evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
            [GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
            GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
            InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814 EMBL:AB015477
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 HSSP:P23396
            HOGENOM:HOG000210611 KO:K02985 ProtClustDB:CLSN2683263
            TIGRFAMs:TIGR01008 EMBL:AY058057 EMBL:AY098949 IPI:IPI00539202
            RefSeq:NP_198403.1 UniGene:At.23305 ProteinModelPortal:Q9FJA6
            SMR:Q9FJA6 STRING:Q9FJA6 PRIDE:Q9FJA6 EnsemblPlants:AT5G35530.1
            GeneID:833518 KEGG:ath:AT5G35530 TAIR:At5g35530 InParanoid:Q9FJA6
            OMA:YRIANAM PhylomeDB:Q9FJA6 Genevestigator:Q9FJA6
            GermOnline:AT5G35530 Uniprot:Q9FJA6
        Length = 248

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 92/108 (85%), Positives = 99/108 (91%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS+VQKRFKF   ++ELYAEKVA RGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRR 117


>TAIR|locus:2065863 [details] [associations]
            symbol:AT2G31610 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
            evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0005773 "vacuole" evidence=IDA] [GO:0022626 "cytosolic
            ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=RCA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 GO:GO:0005774
            GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
            GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 UniGene:At.22510
            EMBL:AC007071 GO:GO:0022627 UniGene:At.24124 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 EMBL:AF378887
            EMBL:AY046041 EMBL:AY052749 EMBL:AY054622 EMBL:AY081517
            EMBL:AY091208 IPI:IPI00542059 PIR:H84722 RefSeq:NP_180719.1
            HSSP:P23396 ProteinModelPortal:Q9SIP7 SMR:Q9SIP7 IntAct:Q9SIP7
            STRING:Q9SIP7 PaxDb:Q9SIP7 PRIDE:Q9SIP7 EnsemblPlants:AT2G31610.1
            GeneID:817719 KEGG:ath:AT2G31610 TAIR:At2g31610
            HOGENOM:HOG000210611 InParanoid:Q9SIP7 KO:K02985 OMA:PEGSVEX
            PhylomeDB:Q9SIP7 ProtClustDB:CLSN2683263 Genevestigator:Q9SIP7
            GermOnline:AT2G31610 TIGRFAMs:TIGR01008 Uniprot:Q9SIP7
        Length = 250

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 91/108 (84%), Positives = 98/108 (90%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS+VQKRFKF   ++ELYAEKV  RGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117


>TAIR|locus:2084490 [details] [associations]
            symbol:AT3G53870 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
            evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0009651 "response to salt
            stress" evidence=IEP] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0009651
            GO:GO:0003723 GO:GO:0003735 EMBL:AL132960 GO:GO:0022627
            UniGene:At.24124 SUPFAM:SSF54814 Gene3D:3.30.1140.32
            SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396 HOGENOM:HOG000210611
            KO:K02985 ProtClustDB:CLSN2683263 TIGRFAMs:TIGR01008 EMBL:AF428405
            EMBL:AY035022 EMBL:AY059090 EMBL:AY088808 IPI:IPI00527953
            PIR:T45927 RefSeq:NP_190955.1 ProteinModelPortal:Q9M339 SMR:Q9M339
            IntAct:Q9M339 STRING:Q9M339 PaxDb:Q9M339 PRIDE:Q9M339
            EnsemblPlants:AT3G53870.1 GeneID:824554 KEGG:ath:AT3G53870
            TAIR:At3g53870 InParanoid:Q9M339 OMA:TIRRIMN PhylomeDB:Q9M339
            Genevestigator:Q9M339 GermOnline:AT3G53870 Uniprot:Q9M339
        Length = 249

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 91/108 (84%), Positives = 98/108 (90%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS+VQKRFKF   ++ELYAEKV  RGLCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117


>RGD|1560831 [details] [associations]
            symbol:RGD1560831 "similar to 40S ribosomal protein S3"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
            "small ribosomal subunit" evidence=IEA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 RGD:1560831
            GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
            InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
            GeneTree:ENSGT00390000008610 OrthoDB:EOG4GXFNJ IPI:IPI00195999
            RefSeq:XP_001057158.1 RefSeq:XP_575143.1 PRIDE:D3ZVH2
            Ensembl:ENSRNOT00000009988 GeneID:499803 KEGG:rno:499803
            UCSC:RGD:1560831 CTD:499803 OMA:RITENTT NextBio:704057
            Uniprot:D3ZVH2
        Length = 243

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 88/108 (81%), Positives = 100/108 (92%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYS VE+R TP RTEIII+ TRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQK+F F +G++ELYAEKVAT GLCAIAQAESL YKL+GGLAVRR
Sbjct:    70 TAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRR 117


>UNIPROTKB|J3KN86 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0006412
            GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.300.20
            InterPro:IPR015946 SUPFAM:SSF54814 Gene3D:3.30.1140.32
            SUPFAM:SSF54821 KO:K02985 CTD:6188 OMA:CNDYVET ChiTaRS:RpS3
            UniGene:Hs.546286 UniGene:Hs.740358 GeneID:6188 KEGG:hsa:6188
            HGNC:HGNC:10420 EMBL:AP000744 RefSeq:NP_001247435.1
            ProteinModelPortal:J3KN86 Ensembl:ENST00000278572 Uniprot:J3KN86
        Length = 259

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 93/124 (75%), Positives = 104/124 (83%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIEL----------------YAEKVATRGLCAIAQAESLRYKLIGGL 107
             T+VVQKRF F +G++EL                YAEKVATRGLCAIAQAESLRYKL+GGL
Sbjct:    70 TAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGL 129

Query:   108 AVRR 111
             AVRR
Sbjct:   130 AVRR 133


>WB|WBGene00004472 [details] [associations]
            symbol:rps-3 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0015935 "small ribosomal subunit"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0019915 "lipid
            storage" evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
            process" evidence=IMP] InterPro:IPR001351 InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
            InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
            GO:GO:0018996 GO:GO:0000003 GO:GO:0003723 GO:GO:0019915
            GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
            GO:GO:0015935 EMBL:FO080630 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            GeneTree:ENSGT00390000008610 OMA:CNDYVET PIR:T15579
            RefSeq:NP_498349.1 ProteinModelPortal:P48152 SMR:P48152
            DIP:DIP-25651N IntAct:P48152 MINT:MINT-1039773 STRING:P48152
            PaxDb:P48152 PRIDE:P48152 EnsemblMetazoa:C23G10.3.1
            EnsemblMetazoa:C23G10.3.2 EnsemblMetazoa:C23G10.3.3 GeneID:175879
            KEGG:cel:CELE_C23G10.3 UCSC:C23G10.3.1 CTD:175879 WormBase:C23G10.3
            InParanoid:P48152 NextBio:890122 Uniprot:P48152
        Length = 247

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 82/108 (75%), Positives = 97/108 (89%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             K V  G+F+AEL+ FL +ELAEDGYSGVE+R TPAR E+IIMATRTQNVLG++GRRI+EL
Sbjct:    12 KAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKEL 71

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TSVVQKRF F +G++ELYAEKV+ RGLCA+AQ ESLRYKL+GGLAVRR
Sbjct:    72 TSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119


>POMBASE|SPBC16G5.14c [details] [associations]
            symbol:rps3 "40S ribosomal protein S3 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
            translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
            evidence=ISO] InterPro:IPR001351 InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
            InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 PomBase:SPBC16G5.14c EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
            GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            OMA:YRIANAM EMBL:AB264328 PIR:T39606 RefSeq:NP_596763.1
            ProteinModelPortal:O60128 SMR:O60128 IntAct:O60128 STRING:O60128
            PRIDE:O60128 EnsemblFungi:SPBC16G5.14c.1 GeneID:2539797
            KEGG:spo:SPBC16G5.14c OrthoDB:EOG4GTPP2 NextBio:20800946
            Uniprot:O60128
        Length = 249

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 82/108 (75%), Positives = 96/108 (88%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+EF TREL+E+GYSG E+R TP+R+EIII AT TQ+VLG+KGRRIREL
Sbjct:    12 KFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRRIREL 71

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T++VQKRFKFA+  +ELYAEKV  RGLCA+AQ ESLRYKL+ GLAVRR
Sbjct:    72 TALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRR 119


>GENEDB_PFALCIPARUM|PF14_0627 [details] [associations]
            symbol:PF14_0627 "ribosomal protein S3,
            putative" species:5833 "Plasmodium falciparum" [GO:0022627
            "cytosolic small ribosomal subunit" evidence=ISS]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
            InterPro:IPR005703 InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
            GO:GO:0003735 EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985
            TIGRFAMs:TIGR01008 OMA:CNDYVET ProtClustDB:PTZ00084
            RefSeq:XP_001348801.1 ProteinModelPortal:Q8IKH8 SMR:Q8IKH8
            PRIDE:Q8IKH8 EnsemblProtists:PF14_0627:mRNA GeneID:812209
            KEGG:pfa:PF14_0627 EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
        Length = 221

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 80/109 (73%), Positives = 94/109 (86%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KF+ DGVF+AEL+EFL R LAEDGYSGVE+R TP RTE+II ATRT+ VLGDKGRRIREL
Sbjct:    10 KFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIREL 69

Query:    64 TSVVQKRF-KFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS+VQKRF   +  ++EL+AE+V  RGLCA+AQAESLRYKL+ GLAVRR
Sbjct:    70 TSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRR 118


>UNIPROTKB|Q8IKH8 [details] [associations]
            symbol:PF14_0627 "40S ribosomal protein S3, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
            small ribosomal subunit" evidence=ISS] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823
            SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
            EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32
            SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            OMA:CNDYVET ProtClustDB:PTZ00084 RefSeq:XP_001348801.1
            ProteinModelPortal:Q8IKH8 SMR:Q8IKH8 PRIDE:Q8IKH8
            EnsemblProtists:PF14_0627:mRNA GeneID:812209 KEGG:pfa:PF14_0627
            EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
        Length = 221

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 80/109 (73%), Positives = 94/109 (86%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KF+ DGVF+AEL+EFL R LAEDGYSGVE+R TP RTE+II ATRT+ VLGDKGRRIREL
Sbjct:    10 KFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIREL 69

Query:    64 TSVVQKRF-KFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS+VQKRF   +  ++EL+AE+V  RGLCA+AQAESLRYKL+ GLAVRR
Sbjct:    70 TSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRR 118


>SGD|S000005122 [details] [associations]
            symbol:RPS3 "Protein component of the small (40S) ribosomal
            subunit, has apurinic/" species:4932 "Saccharomyces cerevisiae"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0030688 "preribosome,
            small subunit precursor" evidence=IDA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0000056 "ribosomal small subunit export from nucleus"
            evidence=IGI] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
            [GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA
            export from nucleus" evidence=IMP] [GO:0003906 "DNA-(apurinic or
            apyrimidinic site) lyase activity" evidence=IDA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 SGD:S000005122
            EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
            GO:GO:0003906 KO:K03348 RefSeq:NP_014227.4 GeneID:855549
            KEGG:sce:YNL172W GO:GO:0000056 GO:GO:0030686 PDB:1S1H PDBsum:1S1H
            GO:GO:0022627 GO:GO:0030688 SUPFAM:SSF54814 PDB:3IZB PDB:3O2Z
            PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
            PDBsum:3U5C PDBsum:3U5G GO:GO:0006407 Gene3D:3.30.1140.32
            SUPFAM:SSF54821 eggNOG:COG0092 PDB:1K5X PDBsum:1K5X
            HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
            GeneTree:ENSGT00390000008610 OrthoDB:EOG4GTPP2 EMBL:U34347
            EMBL:D25285 EMBL:L31405 EMBL:Z71454 PIR:S48510 RefSeq:NP_014221.3
            ProteinModelPortal:P05750 SMR:P05750 DIP:DIP-4328N IntAct:P05750
            MINT:MINT-512497 STRING:P05750 UCD-2DPAGE:P05750 PaxDb:P05750
            PeptideAtlas:P05750 PRIDE:P05750 EnsemblFungi:YNL178W GeneID:855543
            KEGG:sce:YNL178W EvolutionaryTrace:P05750 NextBio:979610
            Genevestigator:P05750 GermOnline:YNL178W Uniprot:P05750
        Length = 240

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 76/108 (70%), Positives = 92/108 (85%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             K VADGVF AEL+EF TRELAE+GYSGVE+R TP +TE+II ATRTQ+VLG+ GRRI EL
Sbjct:    10 KLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINEL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T +VQKRFK+A G I LYAE+V  RGL A+AQAES+++KL+ GLA+RR
Sbjct:    70 TLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRR 117


>UNIPROTKB|E9PL09 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
            evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
            InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
            GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
            GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            TIGRFAMs:TIGR01008 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            IPI:IPI00978298 ProteinModelPortal:E9PL09 SMR:E9PL09 PRIDE:E9PL09
            Ensembl:ENST00000526608 ArrayExpress:E9PL09 Bgee:E9PL09
            Uniprot:E9PL09
        Length = 231

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 82/108 (75%), Positives = 92/108 (85%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             T+VVQKRF F +G+            LCAIAQAESLRYKL+GGLAVRR
Sbjct:    70 TAVVQKRFGFPEGS------------LCAIAQAESLRYKLLGGLAVRR 105


>UNIPROTKB|G4MP11 [details] [associations]
            symbol:MGG_05673 "40S ribosomal protein S3" species:242507
            "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
            evidence=IEP] InterPro:IPR001351 InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
            InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
            GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF54814
            GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
            TIGRFAMs:TIGR01008 RefSeq:XP_003710572.1 ProteinModelPortal:G4MP11
            SMR:G4MP11 EnsemblFungi:MGG_05673T0 GeneID:2675978
            KEGG:mgr:MGG_05673 Uniprot:G4MP11
        Length = 262

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 77/108 (71%), Positives = 89/108 (82%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+EF  RELAE+GYSGVE+R TP  T+III AT TQ VLG++GRRIREL
Sbjct:    14 KFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRRIREL 73

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS++QKRFKF   ++ LYA KV  RGL A+AQ ESLRYKL+ GLAVRR
Sbjct:    74 TSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 121


>UNIPROTKB|E9PPU1 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
            SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
            SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            IPI:IPI00984887 ProteinModelPortal:E9PPU1 SMR:E9PPU1 PRIDE:E9PPU1
            Ensembl:ENST00000534440 ArrayExpress:E9PPU1 Bgee:E9PPU1
            Uniprot:E9PPU1
        Length = 158

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 73/90 (81%), Positives = 84/90 (93%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAI 93
             T+VVQKRF F +G++ELYAEKVATRG+  I
Sbjct:    70 TAVVQKRFGFPEGSVELYAEKVATRGVLGI 99


>ASPGD|ASPL0000016707 [details] [associations]
            symbol:AN4087 species:162425 "Emericella nidulans"
            [GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0000056
            "ribosomal small subunit export from nucleus" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA]
            [GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
            "preribosome, small subunit precursor" evidence=IEA] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IEA] [GO:0003906
            "DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
            PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723 EMBL:BN001302
            GO:GO:0003735 SUPFAM:SSF54814 GO:GO:0015935 EMBL:AACD01000066
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
            HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
            OrthoDB:EOG4GTPP2 RefSeq:XP_661691.1 ProteinModelPortal:Q5B5U3
            SMR:Q5B5U3 STRING:Q5B5U3 EnsemblFungi:CADANIAT00004594
            GeneID:2873506 KEGG:ani:AN4087.2 Uniprot:Q5B5U3
        Length = 264

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 74/108 (68%), Positives = 87/108 (80%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADGVF AEL+EF  RELAE+GYSGVE+R TP  T+I    T TQ VLG++GRRIREL
Sbjct:    13 KFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGRRIREL 70

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS++QKRFKF + ++ LYA KV  RGL A+AQ ESLRYKL+ GLAVRR
Sbjct:    71 TSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 118


>DICTYBASE|DDB_G0293000 [details] [associations]
            symbol:rps3 "40S ribosomal protein S3" species:44689
            "Dictyostelium discoideum" [GO:0005615 "extracellular space"
            evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0003735 "structural constituent
            of ribosome" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
            InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
            PROSITE:PS50823 SMART:SM00322 dictyBase:DDB_G0293000 GO:GO:0005615
            GO:GO:0045335 GenomeReviews:CM000155_GR GO:GO:0006412 GO:GO:0003723
            GO:GO:0003735 EMBL:AAFI02000199 SUPFAM:SSF54814 GO:GO:0015935
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396
            KO:K02985 TIGRFAMs:TIGR01008 OMA:CNDYVET EMBL:U78756
            RefSeq:XP_629347.1 ProteinModelPortal:P90526 SMR:P90526
            STRING:P90526 PRIDE:P90526 EnsemblProtists:DDB0201667
            GeneID:8629071 KEGG:ddi:DDB_G0293000 InParanoid:P90526
            ProtClustDB:PTZ00084 Uniprot:P90526
        Length = 218

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 67/109 (61%), Positives = 85/109 (77%)

Query:     4 KFVADGVFRAELDEFLTRELAED-GYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRE 62
             KFVADGVF AEL+E  TRE  +D GYSGVE++ +P  TEIII A++TQ V+G   RRI+E
Sbjct:    12 KFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQE 71

Query:    63 LTSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             L S+VQKRF F +G + L+AEK+  RGLCA+AQAESL+ KL+ GL VR+
Sbjct:    72 LCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRK 120


>CGD|CAL0001259 [details] [associations]
            symbol:RPS3 species:5476 "Candida albicans" [GO:0003906
            "DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
            "preribosome, small subunit precursor" evidence=IEA] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IEA] [GO:0006407 "rRNA
            export from nucleus" evidence=IEA] InterPro:IPR001351
            InterPro:IPR004044 InterPro:IPR005703 InterPro:IPR009019
            Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823 CGD:CAL0001259
            GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
            GO:GO:0015935 EMBL:AACQ01000214 EMBL:AACQ01000213
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
            HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
            RefSeq:XP_711097.1 RefSeq:XP_711114.1 ProteinModelPortal:Q59N00
            SMR:Q59N00 STRING:Q59N00 GeneID:3647287 GeneID:3647299
            KEGG:cal:CaO19.13689 KEGG:cal:CaO19.6312 Uniprot:Q59N00
        Length = 251

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 65/108 (60%), Positives = 84/108 (77%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             K VADGVF AEL+EF TRELAE GY+GVE+R TP++ E+I+ A+ TQ VLG++GRRI EL
Sbjct:    11 KLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRRIHEL 70

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 111
             TS++ KRFK +   I +YAE+V  RGL A  QAE+L+ KL+ GL +RR
Sbjct:    71 TSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRR 118


>UNIPROTKB|E9PJH4 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
            Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
            HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00977579
            ProteinModelPortal:E9PJH4 SMR:E9PJH4 PRIDE:E9PJH4
            Ensembl:ENST00000532872 ArrayExpress:E9PJH4 Bgee:E9PJH4
            Uniprot:E9PJH4
        Length = 115

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 62/76 (81%), Positives = 72/76 (94%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIE 79
             T+VVQKRF F +G++E
Sbjct:    70 TAVVQKRFGFPEGSVE 85


>UNIPROTKB|E9PQ96 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
            Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
            HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00980283
            ProteinModelPortal:E9PQ96 SMR:E9PQ96 PRIDE:E9PQ96
            Ensembl:ENST00000528439 ArrayExpress:E9PQ96 Bgee:E9PQ96
            Uniprot:E9PQ96
        Length = 91

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 62/76 (81%), Positives = 72/76 (94%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKRFKFADGAIE 79
             T+VVQKRF F +G++E
Sbjct:    70 TAVVQKRFGFPEGSVE 85


>UNIPROTKB|D4AAX0 [details] [associations]
            symbol:D4AAX0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] InterPro:IPR001351 InterPro:IPR009019 GO:GO:0006412
            GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814
            Gene3D:3.30.1140.32 SUPFAM:SSF54821 GeneTree:ENSGT00390000008610
            EMBL:AC111678 IPI:IPI00391156 Ensembl:ENSRNOT00000038678
            Uniprot:D4AAX0
        Length = 222

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 69/107 (64%), Positives = 83/107 (77%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             K VA+G+F+AEL+EFLT+ELAEDG+SGVE+  T  RTEI I ATRTQ+VLG+KG  IR +
Sbjct:    10 KSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLGEKGHGIRSI 69

Query:    64 TSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVR 110
               V QKRF F +G +EL AEKVA R LCA  QAES  YKL+G LA+R
Sbjct:    70 AGV-QKRFCFPEGNLELCAEKVAMRSLCAFVQAESAGYKLLGRLALR 115


>UNIPROTKB|E9PK82 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
            InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
            Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
            HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00981193
            ProteinModelPortal:E9PK82 SMR:E9PK82 PRIDE:E9PK82
            Ensembl:ENST00000527273 ArrayExpress:E9PK82 Bgee:E9PK82
            Uniprot:E9PK82
        Length = 128

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 58/67 (86%), Positives = 65/67 (97%)

Query:     4 KFVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIREL 63
             KFVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATRTQNVLG+KGRRIREL
Sbjct:    10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

Query:    64 TSVVQKR 70
             T+VVQKR
Sbjct:    70 TAVVQKR 76


>UNIPROTKB|F1SUM7 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
            scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR001351 InterPro:IPR005703
            InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 PROSITE:PS00548
            GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
            GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
            TIGRFAMs:TIGR01008 OMA:TIRRIMN GeneTree:ENSGT00390000008610
            EMBL:CU655994 Ensembl:ENSSSCT00000016207 Uniprot:F1SUM7
        Length = 195

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 59/68 (86%), Positives = 66/68 (97%)

Query:    44 IMATRTQNVLGDKGRRIRELTSVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKL 103
             I+ATRTQNVLG+KGRRIRELT+VVQKRF F +G++ELYAEKVATRGLCAIAQAESLRYKL
Sbjct:     2 ILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKL 61

Query:   104 IGGLAVRR 111
             +GGLAVRR
Sbjct:    62 LGGLAVRR 69


>UNIPROTKB|H0YEU2 [details] [associations]
            symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            InterPro:IPR001351 InterPro:IPR009019 InterPro:IPR018280
            Pfam:PF00189 PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723
            GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814 Gene3D:3.30.1140.32
            SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
            PRIDE:H0YEU2 Ensembl:ENST00000525933 Bgee:H0YEU2 Uniprot:H0YEU2
        Length = 171

 Score = 198 (74.8 bits), Expect = 8.8e-16, P = 8.8e-16
 Identities = 48/82 (58%), Positives = 55/82 (67%)

Query:     5 FVADGVFRAELDEFLTRELAEDGYSGVEIRFTPARTEIIIMATRT-QNVL------GDKG 57
             FVADG+F+AEL+EFLTRELAEDGYSGVE+R TP RTEIII+ATR    VL      G KG
Sbjct:     2 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRACYGVLRFIMESGAKG 61

Query:    58 RRI---RELTSVVQKRFKFADG 76
               +    +L     K  KF DG
Sbjct:    62 CEVVVSGKLRGQRAKSMKFVDG 83


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.140   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      307       307    0.0010  115 3  11 22  0.44    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  37
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  218 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  24.36u 0.08s 24.44t   Elapsed:  00:00:12
  Total cpu time:  24.36u 0.08s 24.44t   Elapsed:  00:00:13
  Start:  Thu Aug 15 12:41:11 2013   End:  Thu Aug 15 12:41:24 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.3e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Bos taurus	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Canis lupus familiaris	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Sus scrofa	1.6e-45
BLAST match view associations BLAST with Rps3 Rps3 Rps3 ribosomal protein S3	protein from Mus musculus	1.6e-45
BLAST match view associations BLAST with Rps3 Rps3 Rps3 ribosomal protein S3	gene from Rattus norvegicus	1.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Pongo abelii	4.4e-45
BLAST match view associations BLAST with rps3 rps3 rps3 ribosomal protein S3	gene_product from Danio rerio	4.4e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 Uncharacterized protein	protein from Gallus gallus	5.6e-45
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.4e-44
BLAST match view associations BLAST with RpS3 RpS3 RpS3 Ribosomal protein S3	protein from Drosophila melanogaster	2.8e-43
BLAST match view associations BLAST with AT5G35530 AT5G35530 AT5G35530	protein from Arabidopsis thaliana	2.8e-43
BLAST match view associations BLAST with AT2G31610 AT2G31610 AT2G31610	protein from Arabidopsis thaliana	2.5e-42
BLAST match view associations BLAST with AT3G53870 AT3G53870 AT3G53870	protein from Arabidopsis thaliana	2.5e-42
BLAST match view associations BLAST with RGD1560831 RGD1560831 RGD1560831 similar to 40S ribosomal protein S3	gene from Rattus norvegicus	3.2e-42
BLAST match view associations BLAST with rps-3 rps-3 rps-3	gene from Caenorhabditis elegans	2.6e-40
BLAST match view associations BLAST with PF14_0627 PF14_0627 PF14_0627 ribosomal protein S3, putative	gene from Plasmodium falciparum	1.3e-36
BLAST match view associations BLAST with PF14_0627 PF14_0627 PF14_0627 40S ribosomal protein S3, putative	protein from Plasmodium falciparum 3D7	1.3e-36
BLAST match view associations BLAST with RPS3 RPS3 RPS3 Protein component of the small (40S) ribosomal subunit	gene from Saccharomyces cerevisiae	2.7e-36
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	3.5e-36
BLAST match view associations BLAST with MGG_05673 MGG_05673 MGG_05673 40S ribosomal protein S3	protein from Magnaporthe oryzae 70-15	1.2e-35
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	6.5e-35
BLAST match view associations BLAST with rps3 rps3 rps3 40S ribosomal protein S3	gene from Dictyostelium discoideum	1.8e-30
BLAST match view associations BLAST with RPS3 RPS3 RPS3	gene_product from Candida albicans	3.8e-30
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.7e-29
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	2.7e-29
BLAST match view associations BLAST with D4AAX0 D4AAX0 D4AAX0 Uncharacterized protein	protein from Rattus norvegicus	3.4e-29
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	1.5e-26
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Sus scrofa	1.5e-26
BLAST match view associations BLAST with RPS3 RPS3 RPS3 40S ribosomal protein S3	protein from Homo sapiens	8.8e-16