BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17940
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193692994|ref|XP_001949960.1| PREDICTED: coatomer subunit beta-like [Acyrthosiphon pisum]
Length = 960
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK EE+S +KAKEKPGHKV DD I FL +S+ G+E GTENVFELSLNQA+ G
Sbjct: 643 MLAAKEDEESSNKKAKEKPGHKVNVDDAIVFLR-TSSNGTE--GTENVFELSLNQAVAGG 699
Query: 61 GPAAAQT--QAADPSGASKLNKM 81
G + A+ S SKLNK+
Sbjct: 700 GSIHHSSGDGASGLSTNSKLNKV 722
>gi|170034388|ref|XP_001845056.1| coatomer subunit beta [Culex quinquefasciatus]
gi|167875689|gb|EDS39072.1| coatomer subunit beta [Culex quinquefasciatus]
Length = 956
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML A+++EE TQK K+K K+QPDDPI+F +LSS + + G ENVFE SLNQAL G+
Sbjct: 643 MLSAQNEEEQQTQKDKQKVAAKIQPDDPIAFTQLSSGKNDQLG--ENVFESSLNQALAGT 700
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ A + A P+ +KLNK+
Sbjct: 701 -KSTALSDVASPN--NKLNKV 718
>gi|405964798|gb|EKC30244.1| Coatomer subunit beta [Crassostrea gigas]
Length = 963
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK +EE Q+A EK KVQ DDPISF +L +E G TEN+FEL+L+QAL S
Sbjct: 651 MLAAKMEEEKELQRASEKRTVKVQADDPISFAQL--VNKAEMGATENMFELTLSQALGMS 708
Query: 61 GPAAAQTQAADPSGASKLNKM 81
G + DP GASKLNK+
Sbjct: 709 GK-----KDGDPIGASKLNKV 724
>gi|189234428|ref|XP_001816488.1| PREDICTED: similar to coatomer subunit beta [Tribolium castaneum]
gi|270001762|gb|EEZ98209.1| hypothetical protein TcasGA2_TC000641 [Tribolium castaneum]
Length = 957
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK EEA QKAKEK G+ +Q DDPI+F++L + + E G ENVFE SL+QAL+G
Sbjct: 642 MLVAKEIEEALNQKAKEKAGNVIQADDPINFMQLQADKSGELG--ENVFETSLSQALVGG 699
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ T +G +KLNK+
Sbjct: 700 RVGGSDTS----TGVNKLNKV 716
>gi|158302111|ref|XP_321735.4| AGAP001399-PA [Anopheles gambiae str. PEST]
gi|157012794|gb|EAA01097.4| AGAP001399-PA [Anopheles gambiae str. PEST]
Length = 959
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 1 MLEAKSQEEASTQKAKE-KPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML A+S+E+A +K K+ K K+QPDDPI+F +L++ + + G ENVFELSLNQAL G
Sbjct: 645 MLTAQSEEKAQEKKDKQQKNAAKIQPDDPIAFTQLANGKHDQLG--ENVFELSLNQALAG 702
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + A T A P+ SKLNK+
Sbjct: 703 T-KSTALTDVASPN--SKLNKV 721
>gi|157106589|ref|XP_001649392.1| coatomer beta subunit [Aedes aegypti]
gi|108879811|gb|EAT44036.1| AAEL004546-PA [Aedes aegypti]
Length = 956
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML A++ EE TQK K+K K+QPDDPI+F +L++ + + G ENVFE SLNQAL G+
Sbjct: 643 MLNAQNAEEQQTQKDKQKTAAKIQPDDPIAFTQLANGKNDQLG--ENVFESSLNQALAGT 700
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ A P+ +KLNK+
Sbjct: 701 -KNTTLSDVASPN--NKLNKV 718
>gi|312373694|gb|EFR21393.1| hypothetical protein AND_17130 [Anopheles darlingi]
Length = 995
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 1 MLEAKSQEEASTQKAKE-KPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML A++ E+ QK K+ K K+QPDDPI+F +L+ + + G ENVFELSLNQAL G
Sbjct: 645 MLSAQNDEKLQAQKDKQQKNAAKIQPDDPIAFTQLADGKNDQLG--ENVFELSLNQALAG 702
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ P A S SKLNK+
Sbjct: 703 TKPTGLTDVA---SLNSKLNKI 721
>gi|195432256|ref|XP_002064142.1| GK19864 [Drosophila willistoni]
gi|194160227|gb|EDW75128.1| GK19864 [Drosophila willistoni]
Length = 959
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ +E+ K K++ KVQPDDP++F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 649 MLDAQQEEDQRVLKEKQRAAAKVQPDDPVAFAQLSNGRDNQLG--ENVFESSLNQALAGS 706
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ +KLNK+
Sbjct: 707 -KTAQLSDIASPN--NKLNKV 724
>gi|110763426|ref|XP_001120953.1| PREDICTED: coatomer subunit beta [Apis mellifera]
Length = 949
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG+ VQ DDPI FL+LS RGS+ GG +VFE SL+ A+
Sbjct: 633 MLAAKAEEDSQNQKAKEKPGNVVQVDDPIQFLQLS--RGSDLTGGAGDVFEQSLSAAV-- 688
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+G A A PS SK+ ++
Sbjct: 689 AGRPGASGDAPAPSALSKVTQL 710
>gi|195567509|ref|XP_002107302.1| GD15643 [Drosophila simulans]
gi|194204708|gb|EDX18284.1| GD15643 [Drosophila simulans]
Length = 846
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 536 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 593
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 594 -KNAQLSDVASPN--SKLNKV 611
>gi|194766724|ref|XP_001965474.1| GF22509 [Drosophila ananassae]
gi|190619465|gb|EDV34989.1| GF22509 [Drosophila ananassae]
Length = 962
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A++ E+ K K++ KVQPDDP+SF +LS+ R ++ G ENVFE SLNQAL G+
Sbjct: 652 MLDAQADEDQRVLKEKQRAAAKVQPDDPVSFGQLSNGRDNQLG--ENVFESSLNQALAGT 709
Query: 61 GPAAAQTQAADPSGA-SKLNKM 81
A Q +D S +KLNK+
Sbjct: 710 KNA----QMSDISSPNNKLNKV 727
>gi|195039810|ref|XP_001990951.1| GH12352 [Drosophila grimshawi]
gi|193900709|gb|EDV99575.1| GH12352 [Drosophila grimshawi]
Length = 970
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ +E+ QK K++ KVQPD P+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 660 MLDAQQEEDQRMQKEKQRATAKVQPDSPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 717
Query: 61 GPAAAQTQAADPSGA-SKLNKM 81
A Q +D S +KLNK+
Sbjct: 718 KTA----QLSDMSSPNNKLNKV 735
>gi|195345433|ref|XP_002039273.1| GM22820 [Drosophila sechellia]
gi|194134499|gb|EDW56015.1| GM22820 [Drosophila sechellia]
Length = 964
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 654 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 711
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 712 KNAQL-SDVASPN--SKLNKV 729
>gi|220942592|gb|ACL83839.1| betaCop-PA [synthetic construct]
Length = 965
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 654 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 711
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 712 KNAQL-SDVASPN--SKLNKV 729
>gi|17647193|ref|NP_523400.1| beta-coatomer protein [Drosophila melanogaster]
gi|32172433|sp|P45437.2|COPB_DROME RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|5052602|gb|AAD38631.1|AF145656_1 BcDNA.GH09317 [Drosophila melanogaster]
gi|22832491|gb|AAF48830.2| beta-coatomer protein [Drosophila melanogaster]
Length = 964
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 654 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 711
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 712 KNAQL-SDVASPN--SKLNKV 729
>gi|472343|gb|AAA21090.1| bcop [Drosophila melanogaster]
Length = 962
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 653 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 710
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 711 KNAQL-SDVASPN--SKLNKV 728
>gi|195481318|ref|XP_002101602.1| GE15534 [Drosophila yakuba]
gi|194189126|gb|EDX02710.1| GE15534 [Drosophila yakuba]
Length = 964
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 654 MLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 711
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 712 KNAQL-SDVASPN--SKLNKV 729
>gi|194892406|ref|XP_001977656.1| GG18127 [Drosophila erecta]
gi|190649305|gb|EDV46583.1| GG18127 [Drosophila erecta]
Length = 965
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K+K KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL GS
Sbjct: 655 MLDAQQDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGS 712
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A + A P+ SKLNK+
Sbjct: 713 KNAQL-SDVASPN--SKLNKV 730
>gi|156549244|ref|XP_001606861.1| PREDICTED: coatomer subunit beta [Nasonia vitripennis]
Length = 959
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++EE+ QKAKEKPG+ VQ DDPI FL+L+ + S+ GG +VFE SL+ A+
Sbjct: 643 MLTAKAEEESQNQKAKEKPGNIVQVDDPIQFLQLN--KSSDLTGGAGDVFEQSLSAAV-- 698
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+G + + +A PS SK+ ++
Sbjct: 699 AGRSGGEKEAPAPSALSKVTQL 720
>gi|307199989|gb|EFN80339.1| Coatomer subunit beta [Harpegnathos saltator]
Length = 905
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG+ VQ DD I FL+LS RGS+ GG +VFE SL+ A+
Sbjct: 580 MLAAKAEEDSQNQKAKEKPGNIVQVDDAIQFLQLS--RGSDLAGGAGDVFEQSLSAAV-- 635
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+G A A PS SK+ ++
Sbjct: 636 AGRPGATGDAPAPSALSKVTQL 657
>gi|195400901|ref|XP_002059054.1| GJ15202 [Drosophila virilis]
gi|194141706|gb|EDW58123.1| GJ15202 [Drosophila virilis]
Length = 960
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+S+E+ K K++ KVQPD P+ F +LS+ R ++ G ENVFE SLNQAL G+
Sbjct: 650 MLDAQSEEDQRMLKEKQRATAKVQPDSPVLFAQLSNGRDNQLG--ENVFESSLNQALAGT 707
Query: 61 GPAAAQTQAADPSG-ASKLNKM 81
A Q +D S SKLNK+
Sbjct: 708 KTA----QLSDMSSPNSKLNKV 725
>gi|198467315|ref|XP_001354355.2| GA19453 [Drosophila pseudoobscura pseudoobscura]
gi|334305795|sp|Q29G21.2|COPB_DROPS RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|198149186|gb|EAL31408.2| GA19453 [Drosophila pseudoobscura pseudoobscura]
Length = 965
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+ E+ K K++ KVQPDDP+ F +LS+ R ++ G ENVFE SLNQAL G+
Sbjct: 655 MLDAQHDEDQRVLKEKQRATAKVQPDDPVLFAQLSNGRDNQLG--ENVFESSLNQALAGT 712
Query: 61 GPAAAQTQAADPSGA-SKLNKM 81
A Q +D S +KLNK+
Sbjct: 713 KTA----QLSDISSPNNKLNKV 730
>gi|383856102|ref|XP_003703549.1| PREDICTED: coatomer subunit beta-like isoform 2 [Megachile
rotundata]
Length = 950
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG VQ DD I FL+LS RGS+ GG+ +VFE SL+ A+ G
Sbjct: 634 MLAAKAEEDSQNQKAKEKPGSVVQVDDAIQFLQLS--RGSDLTGGSGDVFEQSLSAAVAG 691
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
A A PS SK+ ++
Sbjct: 692 RPGAGGDAPA--PSALSKVTQL 711
>gi|383856100|ref|XP_003703548.1| PREDICTED: coatomer subunit beta-like isoform 1 [Megachile
rotundata]
Length = 958
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG VQ DD I FL+LS RGS+ GG+ +VFE SL+ A+ G
Sbjct: 642 MLAAKAEEDSQNQKAKEKPGSVVQVDDAIQFLQLS--RGSDLTGGSGDVFEQSLSAAVAG 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
A A PS SK+ ++
Sbjct: 700 RPGAGGDAPA--PSALSKVTQL 719
>gi|195130843|ref|XP_002009860.1| GI15599 [Drosophila mojavensis]
gi|193908310|gb|EDW07177.1| GI15599 [Drosophila mojavensis]
Length = 959
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A+++E+ K K++ KVQPD P+ F +LS+ R ++ G ENVFE SLNQAL G+
Sbjct: 649 MLDAQTEEDQRMLKEKQRATAKVQPDSPVLFAQLSNGRDNQLG--ENVFESSLNQALAGT 706
Query: 61 GPAAAQTQAADPSGA-SKLNKM 81
A Q +D S +KLNK+
Sbjct: 707 KTA----QISDMSSPNNKLNKV 724
>gi|307180173|gb|EFN68206.1| Coatomer subunit beta [Camponotus floridanus]
Length = 957
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG VQ DD I FL+LS RGS+ GG +VFE SL+ A+
Sbjct: 641 MLTAKAEEDSQNQKAKEKPGSIVQVDDAIQFLQLS--RGSDLAGGAGDVFEQSLSAAV-- 696
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+G A A PS SK+ ++
Sbjct: 697 AGRPGASGDAPAPSVLSKVTQL 718
>gi|350413321|ref|XP_003489957.1| PREDICTED: coatomer subunit beta-like [Bombus impatiens]
Length = 958
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKP VQ DD I FL+LS RGS+ GG +VFE SL+ A+
Sbjct: 642 MLTAKAEEDSQNQKAKEKPSSVVQVDDAIQFLQLS--RGSDLAGGAGDVFEQSLSAAV-- 697
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+G A A PS SK+ ++
Sbjct: 698 AGRPGASGDAPTPSALSKVTQL 719
>gi|332016435|gb|EGI57348.1| Coatomer subunit beta [Acromyrmex echinatior]
Length = 955
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG VQ DD I FL+LS RGS+ GG ++FE SL+ A+ G
Sbjct: 641 MLTAKAEEDSQNQKAKEKPGSIVQVDDAIQFLQLS--RGSDLAGGAGDMFEQSLSAAVAG 698
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +T PS SK+ ++
Sbjct: 699 RPGTSGET----PSALSKVIQL 716
>gi|322793237|gb|EFZ16894.1| hypothetical protein SINV_11018 [Solenopsis invicta]
Length = 1059
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEF-GGTENVFELSLNQALIG 59
ML AK++E++ QKAKEKPG+ VQ DD I FL+LS RGS+ GG ++FE SL+ A+ G
Sbjct: 745 MLTAKAEEDSQNQKAKEKPGNIVQVDDAIQFLQLS--RGSDLAGGAGDMFEQSLSAAVAG 802
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
A+ PS SK+ ++
Sbjct: 803 RPGASGDA----PSALSKVIQL 820
>gi|241672283|ref|XP_002400218.1| coatomer beta subunit, putative [Ixodes scapularis]
gi|215506285|gb|EEC15779.1| coatomer beta subunit, putative [Ixodes scapularis]
Length = 763
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK +EE +QKAK+ G + DDPISF +L+S S GTEN+FE+SL+ A+
Sbjct: 640 MLAAKMEEELESQKAKQVKGVTIHADDPISFGQLASK--SSVAGTENMFEVSLHAAV--- 694
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ A D ASKL+K+
Sbjct: 695 -GVPRRDGAGDLLSASKLSKV 714
>gi|442755511|gb|JAA69915.1| Putative vesicle coat complex copi beta subunit [Ixodes ricinus]
Length = 959
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK +EE +QKAK+ G + DDPISF +L+S S GTEN+FE+SL+ A+
Sbjct: 646 MLAAKMEEELESQKAKQVKGVTIHADDPISFGQLASK--SSVAGTENMFEVSLHAAV--- 700
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ A D ASKL+K+
Sbjct: 701 -GVPRRDGAGDLLSASKLSKV 720
>gi|260825750|ref|XP_002607829.1| hypothetical protein BRAFLDRAFT_275075 [Branchiostoma floridae]
gi|229293178|gb|EEN63839.1| hypothetical protein BRAFLDRAFT_275075 [Branchiostoma floridae]
Length = 930
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML A +EE QK EK VQPDDPISF++L + +E G TE++FELSL QA +G
Sbjct: 619 MLAALHEEEKENQKTVIEKKTVSVQPDDPISFMQLVNK--AEHGTTEDLFELSLLQA-VG 675
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + AADP ASKL K+
Sbjct: 676 T---PQKKDAADPQ-ASKLQKV 693
>gi|443702157|gb|ELU00318.1| hypothetical protein CAPTEDRAFT_184257 [Capitella teleta]
Length = 955
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML K+ EE K+KEK +VQ DDPI F++L + S+ G EN+F+L+L+QAL
Sbjct: 643 MLATKAAEEKEFAKSKEKKTIRVQADDPIGFIQLLAK--SDLGVGENMFDLTLSQAL--- 697
Query: 61 GPAAAQTQAADPSGASKLNKM 81
+ D +SKLNK+
Sbjct: 698 --GVNSKKETDFMSSSKLNKV 716
>gi|327281271|ref|XP_003225372.1| PREDICTED: coatomer subunit beta-like [Anolis carolinensis]
Length = 953
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMSSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|57530020|ref|NP_001006467.1| coatomer subunit beta [Gallus gallus]
gi|82081062|sp|Q5ZIA5.1|COPB_CHICK RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|53136418|emb|CAG32538.1| hypothetical protein RCJMB04_28l17 [Gallus gallus]
Length = 953
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMSSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|326920038|ref|XP_003206283.1| PREDICTED: coatomer subunit beta-like [Meleagris gallopavo]
Length = 953
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMSSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|426367543|ref|XP_004050789.1| PREDICTED: coatomer subunit beta [Gorilla gorilla gorilla]
Length = 897
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|387015224|gb|AFJ49731.1| Coatomer subunit beta-like [Crotalus adamanteus]
Length = 953
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK +QPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTIQPDDPISFMQLTAK--NEMSSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|444730394|gb|ELW70780.1| Coatomer subunit beta [Tupaia chinensis]
Length = 986
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|395543422|ref|XP_003773617.1| PREDICTED: coatomer subunit beta [Sarcophilus harrisii]
Length = 953
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEINCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|126332121|ref|XP_001367107.1| PREDICTED: coatomer subunit beta [Monodelphis domestica]
Length = 953
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEINCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|297689219|ref|XP_002822052.1| PREDICTED: coatomer subunit beta isoform 1 [Pongo abelii]
gi|395742997|ref|XP_003777852.1| PREDICTED: coatomer subunit beta isoform 2 [Pongo abelii]
gi|395742999|ref|XP_003777853.1| PREDICTED: coatomer subunit beta isoform 3 [Pongo abelii]
Length = 953
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|213983027|ref|NP_001135674.1| coatomer protein complex, subunit beta 1 [Xenopus (Silurana)
tropicalis]
gi|197246715|gb|AAI68594.1| Unknown (protein for MGC:185592) [Xenopus (Silurana) tropicalis]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NETASKEDQFQLSLLAAM-- 697
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +AADP ASKLNK+
Sbjct: 698 --GTTQRKEAADPL-ASKLNKV 716
>gi|395815306|ref|XP_003781171.1| PREDICTED: coatomer subunit beta isoform 1 [Otolemur garnettii]
gi|395815308|ref|XP_003781172.1| PREDICTED: coatomer subunit beta isoform 2 [Otolemur garnettii]
gi|395815310|ref|XP_003781173.1| PREDICTED: coatomer subunit beta isoform 3 [Otolemur garnettii]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|332211837|ref|XP_003255022.1| PREDICTED: coatomer subunit beta isoform 1 [Nomascus leucogenys]
gi|332211839|ref|XP_003255023.1| PREDICTED: coatomer subunit beta isoform 2 [Nomascus leucogenys]
gi|332211841|ref|XP_003255024.1| PREDICTED: coatomer subunit beta isoform 3 [Nomascus leucogenys]
gi|402894155|ref|XP_003910236.1| PREDICTED: coatomer subunit beta isoform 1 [Papio anubis]
gi|402894157|ref|XP_003910237.1| PREDICTED: coatomer subunit beta isoform 2 [Papio anubis]
gi|402894159|ref|XP_003910238.1| PREDICTED: coatomer subunit beta isoform 3 [Papio anubis]
gi|403254300|ref|XP_003919911.1| PREDICTED: coatomer subunit beta isoform 1 [Saimiri boliviensis
boliviensis]
gi|403254302|ref|XP_003919912.1| PREDICTED: coatomer subunit beta isoform 2 [Saimiri boliviensis
boliviensis]
gi|403254304|ref|XP_003919913.1| PREDICTED: coatomer subunit beta isoform 3 [Saimiri boliviensis
boliviensis]
gi|355566704|gb|EHH23083.1| Beta-coat protein [Macaca mulatta]
gi|355752307|gb|EHH56427.1| Beta-coat protein [Macaca fascicularis]
gi|380809658|gb|AFE76704.1| coatomer subunit beta [Macaca mulatta]
gi|383415847|gb|AFH31137.1| coatomer subunit beta [Macaca mulatta]
gi|384945348|gb|AFI36279.1| coatomer subunit beta [Macaca mulatta]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|297268352|ref|XP_002808121.1| PREDICTED: LOW QUALITY PROTEIN: coatomer subunit beta-like [Macaca
mulatta]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|431919659|gb|ELK18047.1| Coatomer subunit beta [Pteropus alecto]
Length = 945
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|7705369|ref|NP_057535.1| coatomer subunit beta [Homo sapiens]
gi|221316630|ref|NP_001137533.1| coatomer subunit beta [Homo sapiens]
gi|221316632|ref|NP_001137534.1| coatomer subunit beta [Homo sapiens]
gi|116241311|sp|P53618.3|COPB_HUMAN RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|17432239|gb|AAL39009.1|AF111807_1 MSTP026 [Homo sapiens]
gi|7018432|emb|CAB66528.1| hypothetical protein [Homo sapiens]
gi|22713553|gb|AAH37280.1| Coatomer protein complex, subunit beta 1 [Homo sapiens]
gi|117645586|emb|CAL38259.1| hypothetical protein [synthetic construct]
gi|119588887|gb|EAW68481.1| coatomer protein complex, subunit beta, isoform CRA_a [Homo
sapiens]
gi|119588888|gb|EAW68482.1| coatomer protein complex, subunit beta, isoform CRA_a [Homo
sapiens]
gi|119588889|gb|EAW68483.1| coatomer protein complex, subunit beta, isoform CRA_a [Homo
sapiens]
gi|119588890|gb|EAW68484.1| coatomer protein complex, subunit beta, isoform CRA_a [Homo
sapiens]
gi|119588891|gb|EAW68485.1| coatomer protein complex, subunit beta, isoform CRA_a [Homo
sapiens]
gi|123983328|gb|ABM83405.1| coatomer protein complex, subunit beta 1 [synthetic construct]
gi|123998029|gb|ABM86616.1| coatomer protein complex, subunit beta 1 [synthetic construct]
gi|307685339|dbj|BAJ20600.1| coatomer protein complex, subunit beta 1 [synthetic construct]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|296217627|ref|XP_002755030.1| PREDICTED: coatomer subunit beta isoform 1 [Callithrix jacchus]
gi|296217629|ref|XP_002755031.1| PREDICTED: coatomer subunit beta isoform 2 [Callithrix jacchus]
gi|296217631|ref|XP_002755032.1| PREDICTED: coatomer subunit beta isoform 3 [Callithrix jacchus]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|75041667|sp|Q5R922.1|COPB_PONAB RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|55730026|emb|CAH91738.1| hypothetical protein [Pongo abelii]
Length = 953
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|355680586|gb|AER96575.1| coatomer protein complex, subunit beta 1 [Mustela putorius furo]
Length = 962
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 652 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 709
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 710 T----QRKEAADPL-ASKLNKV 726
>gi|281341607|gb|EFB17191.1| hypothetical protein PANDA_012478 [Ailuropoda melanoleuca]
Length = 934
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|118151108|ref|NP_001071475.1| coatomer subunit beta [Bos taurus]
gi|145558884|sp|A0JN39.1|COPB_BOVIN RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|117306635|gb|AAI26503.1| Coatomer protein complex, subunit beta 1 [Bos taurus]
gi|296480130|tpg|DAA22245.1| TPA: coatomer subunit beta [Bos taurus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|410973239|ref|XP_003993062.1| PREDICTED: coatomer subunit beta [Felis catus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|354488599|ref|XP_003506455.1| PREDICTED: coatomer subunit beta [Cricetulus griseus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|149719463|ref|XP_001504991.1| PREDICTED: coatomer subunit beta isoform 2 [Equus caballus]
gi|149719467|ref|XP_001504992.1| PREDICTED: coatomer subunit beta isoform 3 [Equus caballus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|5257007|gb|AAD41240.1| beta-cop homolog [Homo sapiens]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|351709985|gb|EHB12904.1| Coatomer subunit beta [Heterocephalus glaber]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|348559918|ref|XP_003465762.1| PREDICTED: coatomer subunit beta [Cavia porcellus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|345787834|ref|XP_534069.3| PREDICTED: coatomer subunit beta [Canis lupus familiaris]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|344280549|ref|XP_003412045.1| PREDICTED: coatomer subunit beta [Loxodonta africana]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|344243210|gb|EGV99313.1| Coatomer subunit beta [Cricetulus griseus]
Length = 870
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 565 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 622
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 623 T----QRKEAADPL-ASKLNKV 639
>gi|291384667|ref|XP_002708871.1| PREDICTED: coatomer protein complex, subunit beta 1 [Oryctolagus
cuniculus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|301775861|ref|XP_002923349.1| PREDICTED: coatomer subunit beta-like [Ailuropoda melanoleuca]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|288860138|ref|NP_001165837.1| coatomer subunit beta [Sus scrofa]
gi|334305778|sp|D2SW95.1|COPB_PIG RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|268633765|gb|ACZ15983.1| coatomer protein subunit beta 1 [Sus scrofa]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|426244754|ref|XP_004016182.1| PREDICTED: coatomer subunit beta [Ovis aries]
gi|440912827|gb|ELR62360.1| Coatomer subunit beta [Bos grunniens mutus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|18158449|ref|NP_542959.1| coatomer subunit beta [Rattus norvegicus]
gi|116923|sp|P23514.1|COPB_RAT RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|55819|emb|CAA40505.1| beta COP [Rattus norvegicus]
gi|38197648|gb|AAH61882.1| Coatomer protein complex, subunit beta 1 [Rattus norvegicus]
gi|149068232|gb|EDM17784.1| coatomer protein complex, subunit beta 1, isoform CRA_c [Rattus
norvegicus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|15426055|ref|NP_203534.1| coatomer subunit beta [Mus musculus]
gi|13124070|sp|Q9JIF7.1|COPB_MOUSE RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|8571380|gb|AAF76856.1|AF231925_1 COPI coatomer complex, beta subunit [Mus musculus]
gi|21410372|gb|AAH30837.1| Coatomer protein complex, subunit beta 1 [Mus musculus]
gi|74186175|dbj|BAE42886.1| unnamed protein product [Mus musculus]
gi|148685113|gb|EDL17060.1| coatomer protein complex, subunit beta 1, isoform CRA_b [Mus
musculus]
Length = 953
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|74207982|dbj|BAE29109.1| unnamed protein product [Mus musculus]
Length = 813
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|417405395|gb|JAA49409.1| Putative vesicle coat complex copi beta subunit [Desmodus rotundus]
Length = 953
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|149068231|gb|EDM17783.1| coatomer protein complex, subunit beta 1, isoform CRA_b [Rattus
norvegicus]
Length = 947
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+ G
Sbjct: 636 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTA--KNEMNCKEDQFQLSLLAAM-G 692
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 693 N---TQRKEAADPL-ASKLNKV 710
>gi|149634429|ref|XP_001507656.1| PREDICTED: coatomer subunit beta [Ornithorhynchus anatinus]
Length = 953
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NETSCKEDQFQLSLLAAM-- 697
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +AADP ASKLNK+
Sbjct: 698 --GTTQRKEAADPL-ASKLNKV 716
>gi|449280860|gb|EMC88085.1| Coatomer subunit beta [Columba livia]
Length = 966
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+ G
Sbjct: 655 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTA--KNEMSSKEDQFQLSLLAAM-G 711
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 712 N---TQRKEAADPL-ASKLNKV 729
>gi|114636308|ref|XP_001172089.1| PREDICTED: coatomer subunit beta isoform 5 [Pan troglodytes]
gi|114636310|ref|XP_001172109.1| PREDICTED: coatomer subunit beta isoform 7 [Pan troglodytes]
gi|332835915|ref|XP_003312974.1| PREDICTED: coatomer subunit beta [Pan troglodytes]
gi|410226578|gb|JAA10508.1| coatomer protein complex, subunit beta 1 [Pan troglodytes]
gi|410260766|gb|JAA18349.1| coatomer protein complex, subunit beta 1 [Pan troglodytes]
gi|410343093|gb|JAA40493.1| coatomer protein complex, subunit beta 1 [Pan troglodytes]
gi|410343095|gb|JAA40494.1| coatomer protein complex, subunit beta 1 [Pan troglodytes]
Length = 953
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + + ADP ASKLNK+
Sbjct: 700 T----QRKETADPL-ASKLNKV 716
>gi|224050801|ref|XP_002198193.1| PREDICTED: coatomer subunit beta [Taeniopygia guttata]
Length = 953
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK +QPDDPISF++L++ +E E+ F+LSL A+ G
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTIQPDDPISFMQLTA--KNEMSSKEDQFQLSLLAAM-G 698
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 699 N---TQRKEAADPL-ASKLNKV 716
>gi|397494753|ref|XP_003818236.1| PREDICTED: coatomer subunit beta isoform 1 [Pan paniscus]
gi|397494755|ref|XP_003818237.1| PREDICTED: coatomer subunit beta isoform 2 [Pan paniscus]
gi|397494757|ref|XP_003818238.1| PREDICTED: coatomer subunit beta isoform 3 [Pan paniscus]
Length = 953
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMNCKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + + ADP ASKLNK+
Sbjct: 700 T----QRKETADPL-ASKLNKV 716
>gi|321475505|gb|EFX86468.1| hypothetical protein DAPPUDRAFT_313075 [Daphnia pulex]
Length = 986
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK++EEA+ QK EK +Q DD +SF +L S +E GG E+VFE SL+QAL+GS
Sbjct: 673 MLAAKAEEEAAAQKNLEKNSRSIQADDLVSFKQLLSR--NELGGLEDVFESSLSQALVGS 730
Query: 61 GPAAAQTQAADPSGASKLNKM 81
AQ D S SKLNK+
Sbjct: 731 ----AQRTGLDLS-VSKLNKV 746
>gi|410913063|ref|XP_003970008.1| PREDICTED: coatomer subunit beta-like [Takifugu rubripes]
Length = 953
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLTVRLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAK--NEMTSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|242005067|ref|XP_002423396.1| Coatomer subunit beta, putative [Pediculus humanus corporis]
gi|212506440|gb|EEB10658.1| Coatomer subunit beta, putative [Pediculus humanus corporis]
Length = 966
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 24 QPDDPISFLELSSARGSEFGGTENVFELSLNQALIGSGPAAAQTQAADPSGA-SKLNKM 81
+ DDPI+FL+LS+ RG E G EN+FELSL++A+ G QT + D + A SKLNK+
Sbjct: 673 EADDPITFLQLSALRGGEDFGGENLFELSLSRAVAG----GKQTGSGDFTPASSKLNKV 727
>gi|148223736|ref|NP_001090083.1| uncharacterized protein LOC735158 [Xenopus laevis]
gi|71679873|gb|AAI00180.1| MGC114704 protein [Xenopus laevis]
Length = 953
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLSAKLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NETASKEDQFQLSLLAAM-- 697
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +AADP ASKLNK+
Sbjct: 698 --GTTQRKEAADPL-ASKLNKV 716
>gi|349603025|gb|AEP98983.1| Coatomer subunit beta-like protein, partial [Equus caballus]
Length = 307
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDPISF++L++ +E E+ F+LSL A+
Sbjct: 235 MLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTA--KNEMNCKEDQFQLSLLAAMGN 292
Query: 60 SGPAAAQTQAADPSGASKLN 79
+ + +AADP ASKLN
Sbjct: 293 TQ----RKEAADPL-ASKLN 307
>gi|148223539|ref|NP_001085859.1| coatomer protein complex, subunit beta 1 [Xenopus laevis]
gi|49118448|gb|AAH73438.1| MGC80934 protein [Xenopus laevis]
Length = 960
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 649 MLSAKLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NETASKEDQFQLSLLAAM-- 704
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +AADP ASKLNK+
Sbjct: 705 --GTTQRKEAADPL-ASKLNKV 723
>gi|427783789|gb|JAA57346.1| Putative vesicle coat complex copi beta subunit [Rhipicephalus
pulchellus]
Length = 955
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 9/81 (11%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML AK++EEA TQKAK+ G V DDPI F +L +A+GS GTEN+FE+SL+ A+
Sbjct: 645 MLAAKAEEEAETQKAKQAKGITVHADDPICFGQL-AAKGS-LAGTENMFEVSLHAAV--- 699
Query: 61 GPAAAQTQAADPSGASKLNKM 81
A ++ D ASKL+K+
Sbjct: 700 ----ASSRNEDLLSASKLSKV 716
>gi|67967944|dbj|BAE00454.1| unnamed protein product [Macaca fascicularis]
Length = 327
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK +EE +QK + EK VQPDDP SF++L++ +E E+ F+LSL A+
Sbjct: 16 MLSAKLEEEKLSQKKESEKRNVTVQPDDPTSFMQLTA--KNEMNCKEDQFQLSLLAAMGN 73
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 74 T----QRKEAADPL-ASKLNKV 90
>gi|324503540|gb|ADY41537.1| Coatomer subunit beta [Ascaris suum]
Length = 969
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
MLEAK+ + + KP H V+ D I F +L+ G GTEN+F+LSL+QAL G+
Sbjct: 651 MLEAKADTDRHEIETISKPAH-VEVDQTIMFTQLAPRVGDGLSGTENLFDLSLSQAL-GT 708
Query: 61 GPAAAQTQAADPSGASKLNKM 81
P A+ A +SKL K+
Sbjct: 709 VPKTAKFDFA----SSKLGKV 725
>gi|198432741|ref|XP_002131807.1| PREDICTED: similar to Coatomer protein complex, subunit beta 1
[Ciona intestinalis]
Length = 964
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MLEAKSQEEASTQKAKEKPGHK---VQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
+LE ++ EE+ ++ E+ VQPDDPI+F +L + +E G E+ FELSL+ A+
Sbjct: 650 LLEIRAAEESVQRRVAERTKTALTAVQPDDPINFAQLLAK--AESGSLEDQFELSLSAAV 707
Query: 58 IGSGPAAAQTQAADPSGASKLNKM 81
G + +A DP+ ASKLNK+
Sbjct: 708 ---GTLNQKKEARDPT-ASKLNKV 727
>gi|339245715|ref|XP_003374491.1| coatomer subunit beta [Trichinella spiralis]
gi|316972278|gb|EFV55961.1| coatomer subunit beta [Trichinella spiralis]
Length = 966
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 2 LEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
+EAK++++A+T KE+ QPDD I+F +LS+ E +N+FE+SLNQAL
Sbjct: 653 MEAKARKQATTTIGKEENVVISQPDDGIAFYQLSAKSAPE--TVDNIFEMSLNQAL 706
>gi|47230461|emb|CAF99654.1| unnamed protein product [Tetraodon nigroviridis]
Length = 979
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 668 MLTVRLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NEMTSKEDQFQLSLLAAMGN 725
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 726 T----QRKEAADPL-ASKLNKV 742
>gi|348509611|ref|XP_003442341.1| PREDICTED: coatomer subunit beta-like [Oreochromis niloticus]
Length = 953
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLAVRLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NEMTSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|432851750|ref|XP_004067066.1| PREDICTED: coatomer subunit beta-like [Oryzias latipes]
Length = 953
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLAVRLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NEMCSKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +AADP ASKLNK+
Sbjct: 700 T----QRKEAADPL-ASKLNKV 716
>gi|50300477|ref|NP_001002013.1| coatomer subunit beta [Danio rerio]
gi|34224013|gb|AAQ63171.1| coatomer protein complex subunit beta 1 [Danio rerio]
Length = 953
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLAVRLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NEMASKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +A DP ASKLNK+
Sbjct: 700 T----QRKEATDPL-ASKLNKV 716
>gi|82181062|sp|Q66HV4.1|COPB_DANRE RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
protein; Short=Beta-COP
gi|51858536|gb|AAH81657.1| Coatomer protein complex, subunit beta 1 [Danio rerio]
Length = 953
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLAVRLEEEKLSQKKESEKRNVTVQADDPISFMQLTAK--NEMASKEDQFQLSLLAAMGN 699
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ + +A DP ASKLNK+
Sbjct: 700 T----QRKEATDPL-ASKLNKV 716
>gi|195172069|ref|XP_002026824.1| GL27037 [Drosophila persimilis]
gi|194111763|gb|EDW33806.1| GL27037 [Drosophila persimilis]
Length = 935
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELS 52
ML+A+ E+ K K++ KVQPDDP+ F +LS+ R ++ G ENV +L+
Sbjct: 655 MLDAQHDEDQRVLKEKQRATAKVQPDDPVLFAQLSNGRDNQLG--ENVTQLT 704
>gi|620110|emb|CAA57622.1| beta-Coat protein [Homo sapiens]
Length = 303
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 11 STQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGSGPAAAQTQAA 70
S +K EK VQPDDPISF++L++ +E E+ F+LSL A+ + + +AA
Sbjct: 3 SQKKESEKRNVTVQPDDPISFMQLTA--KNEMNCKEDQFQLSLLAAMGNT----QRKEAA 56
Query: 71 DPSGASKLNKM 81
DP ASKLNK+
Sbjct: 57 DPL-ASKLNKV 66
>gi|213515116|ref|NP_001133821.1| Coatomer subunit beta [Salmo salar]
gi|209155448|gb|ACI33956.1| Coatomer subunit beta [Salmo salar]
Length = 953
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML + +EE +QK + EK VQ DDPISF++L++ +E E+ F+LSL A+
Sbjct: 642 MLTVRLEEEKLSQKKESEKRNVLVQADDPISFMQLTAK--NETSSKEDQFQLSLLAAM-- 697
Query: 60 SGPAAAQTQAADPSGASKLNKM 81
+ +A DP ASKLNK+
Sbjct: 698 --GTTLKKEANDPM-ASKLNKV 716
>gi|156366295|ref|XP_001627074.1| predicted protein [Nematostella vectensis]
gi|156213973|gb|EDO34974.1| predicted protein [Nematostella vectensis]
Length = 961
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGS 60
ML+A + E QKA + +Q DDPISFL+L + SE G TE+ F +SL+QA+ +
Sbjct: 651 MLDANKKLE-DEQKADAEKVMAIQADDPISFLDLLA--KSESGITEDQFAVSLSQAVGAT 707
Query: 61 GPAAAQTQAADPSGASKLNKM 81
G + D +SKLNK+
Sbjct: 708 G------KKEDDLQSSKLNKV 722
>gi|170583079|ref|XP_001896419.1| coatomer beta subunit [Brugia malayi]
gi|158596346|gb|EDP34703.1| coatomer beta subunit, putative [Brugia malayi]
Length = 969
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
MLE+KS+ E +A + +V+ D ISF +L+ G GTEN+F+LSL+QAL
Sbjct: 648 MLESKSKNERFESEATNRTI-QVEVDRTISFTQLAPRVGDGVTGTENLFDLSLSQAL 703
>gi|349805187|gb|AEQ18066.1| putative coatomer subunit beta [Hymenochirus curtipes]
Length = 234
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 1 MLEAKSQEEASTQKAK-EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIG 59
ML AK EE +QK + EK +Q DDPISF++L++ +E E+ F+LS L+
Sbjct: 118 MLSAKLAEEKLSQKKESEKRNVTIQADDPISFMQLTA--KNEMSSKEDQFQLS----LLA 171
Query: 60 SGPAAAQTQAADP 72
+ + +AADP
Sbjct: 172 AMGTTQRKEAADP 184
>gi|312067971|ref|XP_003136994.1| coatomer beta subunit [Loa loa]
Length = 951
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
MLE+KS+ E + + +V+ D ISF +L+ G GTEN+F+LSL+QAL
Sbjct: 648 MLESKSENERYENEIANRTV-QVEVDCTISFTQLAPRVGDGVTGTENLFDLSLSQAL 703
>gi|393911864|gb|EFO27068.2| coatomer beta subunit [Loa loa]
Length = 967
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
MLE+KS+ E + + +V+ D ISF +L+ G GTEN+F+LSL+QAL
Sbjct: 648 MLESKSENERYENEIANRTV-QVEVDCTISFTQLAPRVGDGVTGTENLFDLSLSQAL 703
>gi|391345000|ref|XP_003746781.1| PREDICTED: coatomer subunit beta-like [Metaseiulus occidentalis]
Length = 971
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 1 MLEAKSQEEASTQKAKEK---PGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
ML KS++E + +K + P Q DD ISF L + +G+ TEN+FE+SL +A+
Sbjct: 645 MLAIKSEQENTLEKKSAEVKLPAKDSQVDDCISF-SLLTPKGAGHEATENIFEISLARAV 703
Query: 58 IGSGPAAAQTQAADPSGASKLNKM 81
G+ A D SKL+K+
Sbjct: 704 QGNR----DLHAGDLLKNSKLSKV 723
>gi|428220276|ref|YP_007104446.1| hypothetical protein Syn7502_00142 [Synechococcus sp. PCC 7502]
gi|427993616|gb|AFY72311.1| hypothetical protein Syn7502_00142 [Synechococcus sp. PCC 7502]
Length = 656
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 8 EEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENV--FELSLNQALIGSGPAAA 65
+E S ++ + H + DDP+ FLE+ + SEF GT N+ +++ ++ L G A
Sbjct: 528 QEYSQKEQDTRQEHHLPADDPVIFLEIKVSDPSEFAGTINIQGYQVGNHRILRSQGAAVP 587
Query: 66 QTQAA 70
T AA
Sbjct: 588 NTIAA 592
>gi|402590753|gb|EJW84683.1| hypothetical protein WUBG_04405 [Wuchereria bancrofti]
Length = 947
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 1 MLEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQAL 57
MLE+KS+ E + + +V+ D I F +L+ G GTEN+F+LSL+QAL
Sbjct: 626 MLESKSKNERFESETANRTV-QVEVDRTILFTQLAPRIGDGVTGTENLFDLSLSQAL 681
>gi|17536967|ref|NP_494441.1| Protein COPB-1 [Caenorhabditis elegans]
gi|351018075|emb|CCD61981.1| Protein COPB-1 [Caenorhabditis elegans]
Length = 971
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 2 LEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGSG 61
L+ +++ AST A + V+ D I+F +LS AR ++ G EN+F+LSL+QAL G+
Sbjct: 654 LDVTTEKMASTTAAGYRSKDFVEIDKTINFTQLS-ARSNQQG--ENLFDLSLSQAL-GTA 709
Query: 62 PAAAQTQAADPSGASKLNKM 81
P A Q D S +SKL K+
Sbjct: 710 PKA---QKFDFS-SSKLGKV 725
>gi|320169697|gb|EFW46596.1| coatomer subunit beta [Capsaspora owczarzaki ATCC 30864]
Length = 810
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 1 MLEAKSQ--EEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQA 56
ML+A+ Q EEA +K K +Q DD I F +L S+ G TE+ FE+SL +A
Sbjct: 473 MLQAQRQREEEAKVADSKNKKA-AIQADDMIEFRQLKPKGASDLGSTEDEFEVSLQRA 529
>gi|390350551|ref|XP_787302.2| PREDICTED: coatomer subunit beta-like [Strongylocentrotus
purpuratus]
Length = 867
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 2 LEAKSQEEASTQKAKEKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGSG 61
++ + E+ + EK VQ DDPI FL+L + ++ G TE+ +SL A +G+
Sbjct: 494 IKKAAGEDTQVKGLFEKKVTSVQADDPIHFLQLLAK--ADTGNTEDQLTMSLTLATMGT- 550
Query: 62 PAAAQTQAADPSGASKLNK 80
A+ + AD S ASKL+K
Sbjct: 551 --PARKELADLS-ASKLSK 566
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 17 EKPGHKVQPDDPISFLELSSARGSEFGGTENVFELSLNQALIGSGPAAAQTQAADPSGAS 76
EK VQ DDPI FL+L + ++ G TE+ +SL A +G+ A+ + AD S AS
Sbjct: 570 EKKVTSVQADDPIHFLQLLAK--ADTGNTEDQLTMSLTLATMGT---PARKELADLS-AS 623
Query: 77 KLNKM 81
KL+K+
Sbjct: 624 KLSKV 628
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.302 0.120 0.316
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,166,591,101
Number of Sequences: 23463169
Number of extensions: 37111428
Number of successful extensions: 65234
Number of sequences better than 100.0: 111
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 65112
Number of HSP's gapped (non-prelim): 127
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 69 (31.2 bits)