BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17941
(679 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04451|SYG_BOMMO Glycine--tRNA ligase OS=Bombyx mori PE=1 SV=2
Length = 680
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/679 (68%), Positives = 564/679 (83%), Gaps = 3/679 (0%)
Query: 1 MTDPKVEAELAPLRAAVKEQGDIVRALKAEGAPELDVKKAVAELKLRKKVLDERELKLAP 60
M DPK+E LAPLRA VKEQGD+VR LK E APE+D+KKAVAELK RKK+L+++EL LAP
Sbjct: 1 MADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAP 60
Query: 61 FVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQ 120
FDRAKMEDL+KRRFFYDQSF+IYGGI+GQ+DFGPMGCALK+NM+ W++FF+L+EQ
Sbjct: 61 AEDLFDRAKMEDLIKRRFFYDQSFAIYGGITGQFDFGPMGCALKSNMIHLWKKFFILQEQ 120
Query: 121 MLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQS 180
MLEV+CSILT EPVLKASGHV+RFADLM KD+KTGECFRLDHLIK HLEK+ ++ T
Sbjct: 121 MLEVECSILTPEPVLKASGHVERFADLMTKDIKTGECFRLDHLIKGHLEKIKSDKNTKIE 180
Query: 181 VKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKG 240
+K E DI+IKLDGM+ +EM ++K++ +KSP++ NDL+ P+EFNLMF TQIGPSGL+KG
Sbjct: 181 LKAEIEDILIKLDGMNADEMSALMKRFEMKSPISGNDLTPPIEFNLMFNTQIGPSGLVKG 240
Query: 241 YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHF 300
+LRPETAQGIFVNFKRLLEFN GRLPFAAAQIGN+FRNEISPRSGL+RVREFTM EIEHF
Sbjct: 241 FLRPETAQGIFVNFKRLLEFNQGRLPFAAAQIGNSFRNEISPRSGLLRVREFTMCEIEHF 300
Query: 301 CDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARI 360
CD K H KF V+ TQ + LYSA NQ GKPA+ TIG+AV +V NETLGYFMARI
Sbjct: 301 CDV--KEHPKFESVKNTQSL-LYSADNQEQGKPADLTTIGDAVCKGIVNNETLGYFMARI 357
Query: 361 QKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHF 420
+M++VGIDP++LRFRQHMGNEMAHYACDCWDAECL+SYGW+ECVGCADRSAYDLTQH
Sbjct: 358 HMYMLAVGIDPKRLRFRQHMGNEMAHYACDCWDAECLSSYGWIECVGCADRSAYDLTQHT 417
Query: 421 KATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
KATG+RL+AEK LP P+ E+VE + N G IGK FKKD++ I D LA LD ++ +++
Sbjct: 418 KATGIRLAAEKKLPAPKQIEVVEAIANNGRIGKAFKKDSQAINDTLATLDNAALEEMQKE 477
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
L++NG+Y L+ EF LT ++++KK+ KT HVEEIIPSVIEPSFG+GRI+Y + EHNF
Sbjct: 478 LDSNGEYTLITARGEFKLTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNF 537
Query: 541 KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGS 600
+MR+GDEQRTY +LPP VAP+K +LPLS N EFQPF++ LS EL +S KVDDS GS
Sbjct: 538 RMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGS 597
Query: 601 IGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKI 660
IG+RYARTDE+ +P+ +T+DFDT+KEPH+VTLRERDSM QVR+ + +V +V++DLS +KI
Sbjct: 598 IGRRYARTDELGVPYAVTVDFDTIKEPHTVTLRERDSMRQVRLPMADVPTVVRDLSNSKI 657
Query: 661 TWEDVQSKYPKFEAQEGSK 679
W DV+ KYPKFE QE K
Sbjct: 658 LWSDVEQKYPKFEQQETVK 676
>sp|Q10039|SYG_CAEEL Glycine--tRNA ligase OS=Caenorhabditis elegans GN=grs-1 PE=2 SV=2
Length = 742
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/675 (62%), Positives = 525/675 (77%), Gaps = 2/675 (0%)
Query: 1 MTDPKVEAELAPLRAAVKEQGDIVRALKAEGAPELDVKKAVAELKLRKKVLDERELKLAP 60
M P++EA+LAPLRAAVKE GD++R LKA+GAP++D+ KAV ELK RK++L++ E+ LAP
Sbjct: 65 MATPEIEAKLAPLRAAVKEYGDLIRDLKAKGAPKIDIDKAVVELKARKRLLEDTEIALAP 124
Query: 61 FVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQ 120
+SFDR K+EDLLKRRFFYDQSF+IYGG++G YDFGPMGC+LK NML WR+ F+LEE
Sbjct: 125 KEASFDRLKLEDLLKRRFFYDQSFAIYGGVTGLYDFGPMGCSLKANMLQEWRKHFILEEG 184
Query: 121 MLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQS 180
MLEVDC+ LT EPVLKASGHVDRFAD MVKD+K GECFR DHLIK +EKL + KT +
Sbjct: 185 MLEVDCTSLTPEPVLKASGHVDRFADWMVKDMKNGECFRADHLIKNSIEKLLNDKKTSAA 244
Query: 181 VKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKG 240
VK++ D++ +L+G +M +V+ ++N KSP+T NDL+EP+ FNLMF TQIGP+G K
Sbjct: 245 VKQDGQDVLARLEGFDNKDMHEVITRFNFKSPITGNDLTEPIAFNLMFPTQIGPTGDFKA 304
Query: 241 YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHF 300
+LRPETAQGIFVNFKRLLEFN G+LPFAAAQIG FRNEISPR GLIRVREFTM EIEHF
Sbjct: 305 FLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGLGFRNEISPRQGLIRVREFTMCEIEHF 364
Query: 301 CDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARI 360
DP DKS AKF+ V Q +VL+SACNQ+DG PA+ + IGEAV VANETLGY+MAR
Sbjct: 365 VDPEDKSLAKFAKV-ADQKLVLFSACNQLDGAPAQEVAIGEAVAKKTVANETLGYYMARC 423
Query: 361 QKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHF 420
+F++ VGID +LRFRQH+ NEMAHYA DCWDAE LTSYGW+ECVG ADR+ YDL QH+
Sbjct: 424 HQFLMKVGIDGRRLRFRQHLSNEMAHYAQDCWDAEILTSYGWIECVGNADRACYDLQQHY 483
Query: 421 KATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
KAT V+L AEK LPEP VE N ++GK FKKDAK I +L L VSA+EE
Sbjct: 484 KATNVKLVAEKKLPEPVDVNFVEAQANMALLGKSFKKDAKKIQTSLQQLTSEQVSALEEE 543
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
L Y L VD + + LT + ++IKK TK HV+EI PSVIEPS+GIGRIMYAL EH+F
Sbjct: 544 LLAKKLYNLSVDGQNYALTPEHLNIKKYTKKIHVQEITPSVIEPSYGIGRIMYALLEHSF 603
Query: 541 KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGS 600
+ R+GDEQRT+LA PLVAP+K S+LP+S+N P + + ELS+ +S+KVDDS G+
Sbjct: 604 RQREGDEQRTFLAFKPLVAPIKCSVLPISANDTLIPVMDAVKEELSRFEMSYKVDDSSGT 663
Query: 601 IGKRYARTDEIAIPFGITIDFDTLK-EPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAK 659
IG+RYARTDEI IPFGIT+DFD+LK P +VT+R ++M+Q+R++V+E+ +I DL +
Sbjct: 664 IGRRYARTDEIGIPFGITVDFDSLKTTPFTVTIRHAETMSQIRLEVSELGRLISDLVAGR 723
Query: 660 ITWEDVQSKYPKFEA 674
W D Q+KYPKFEA
Sbjct: 724 QQWSDAQAKYPKFEA 738
>sp|Q9CZD3|SYG_MOUSE Glycine--tRNA ligase OS=Mus musculus GN=Gars PE=1 SV=1
Length = 729
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/671 (61%), Positives = 513/671 (76%), Gaps = 2/671 (0%)
Query: 10 LAPLRAAVKEQGDIVRALKAEGAPELDVKKAVAELKLRKKVLDERELKLAPFVSSFDRAK 69
LAPLR AV++QGD VR LK + AP++DV +AVAELK RK+VL+ +EL L P DRAK
Sbjct: 54 LAPLRLAVRQQGDFVRKLKEDKAPQVDVDRAVAELKARKRVLEAKELALQPKDDIVDRAK 113
Query: 70 MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSIL 129
MED LKRRFFYDQ+F+IYGG+SG YDFGP+GCALK N++ AWRQ F+ EEQ+LE+DC++L
Sbjct: 114 MEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTML 173
Query: 130 TLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIV 189
T EPVLK SGHVD+FAD MVKD+K GECFR DHL+KAHL+KL ++ K K E ++
Sbjct: 174 TPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEMESVL 233
Query: 190 IKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQG 249
+LD + E+ D+ YN+KSP T NDLS P+ FNLMF T IGP G + GYLRPETAQG
Sbjct: 234 AQLDNYGQQELADLFVNYNVKSPTTGNDLSPPVPFNLMFQTFIGPGGNMPGYLRPETAQG 293
Query: 250 IFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHA 309
IF+NFKRLLEFN G+LPFAAAQIGN+FRNEISPRSGLIRVREFTMAEIEHF DPT+K H
Sbjct: 294 IFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPTEKDHP 353
Query: 310 KFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGI 369
KF V + LYSA Q+ G+ A ++ +G+AV ++ N LGYF+ RI ++ VGI
Sbjct: 354 KFQSVADL-CLYLYSAKAQVTGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGI 412
Query: 370 DPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLSA 429
P+KLRFRQHM NEMAHYACDCWDAE TSYGW+E VGCADRS YDL+ H +AT V L A
Sbjct: 413 SPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVA 472
Query: 430 EKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYEL 489
EK L EP+T +V+ NKG +GK +KKDAK + + L+A D +S +E L+ G++ +
Sbjct: 473 EKPLKEPKTVNVVQFEPNKGAVGKAYKKDAKLVLEYLSACDECYISEMELLLSEKGEFTI 532
Query: 490 LVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQR 549
+ K F LTKDM+S+K+ KT HVEE++PSVIEPSFG+GRIMY + EH F +R+GDEQR
Sbjct: 533 ETEGKTFQLTKDMVSVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTILEHTFHVREGDEQR 592
Query: 550 TYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTD 609
T+ + P +VAP K S+LPLS N EF PF+K LS L++NG+S KVDDS GSIG+RYARTD
Sbjct: 593 TFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDSSGSIGRRYARTD 652
Query: 610 EIAIPFGITIDFDTL-KEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKITWEDVQSK 668
EI + FGITIDFDT+ K PH+ TLR+RDSM Q+R +V+E+ +V++DL+ ITW DV+++
Sbjct: 653 EIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPNVVRDLANGNITWADVEAR 712
Query: 669 YPKFEAQEGSK 679
YP FE QE K
Sbjct: 713 YPLFEGQETGK 723
>sp|Q5RBL1|SYG_PONAB Glycine--tRNA ligase OS=Pongo abelii GN=GARS PE=2 SV=1
Length = 739
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/674 (60%), Positives = 516/674 (76%), Gaps = 2/674 (0%)
Query: 7 EAELAPLRAAVKEQGDIVRALKAEGAPELDVKKAVAELKLRKKVLDERELKLAPFVSSFD 66
E LAPLR AV++QGD+VR LK + AP++DV KAVAELK RK+VL+ +EL L P D
Sbjct: 61 EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD 120
Query: 67 RAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDC 126
RAKMED LKRRFFYDQ+F+IYGG+SG YDFGP+GCALK N++ WRQ F+ EEQ+LE+DC
Sbjct: 121 RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC 180
Query: 127 SILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECA 186
++LT EPVLK SGHVD+FAD MVKD+K GECFR DHL+KAHL+KL ++ K K E
Sbjct: 181 TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME 240
Query: 187 DIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPET 246
++ +LD + E+ D+ YN+KSP+T NDLS P+ FNLMF T IGP G + GYLRPET
Sbjct: 241 SVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET 300
Query: 247 AQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDK 306
AQGIF+NFKRLLEFN G+LPFAAAQIGN+FRNEISPRSGLIRVREFTMAEIEHF DP++K
Sbjct: 301 AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK 360
Query: 307 SHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMIS 366
H KF +V + LYSA Q+ G+ A ++ +G+AV ++ N LGYF+ RI ++
Sbjct: 361 DHPKFQNVADLHLY-LYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTK 419
Query: 367 VGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVR 426
VGI P+KLRFRQHM NEMAHYACDCWDAE TSYGW+E VGCADRS YDL+ H +AT V
Sbjct: 420 VGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVP 479
Query: 427 LSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGK 486
L AEK L EP+T +V+ NKG IGK +KKDAK + + LA D ++ +E LN G+
Sbjct: 480 LVAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGE 539
Query: 487 YELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGD 546
+ + + K F LTKDM+++K+ KT +VEE++P+VIEPSFG+GRIMY +FEH F +R+GD
Sbjct: 540 FTIETEGKTFQLTKDMVNVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGD 599
Query: 547 EQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYA 606
EQRT+ + P +VAP K S+LPLS N EF PF+K LS L+++G+S KVDDS GSIG+RYA
Sbjct: 600 EQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYA 659
Query: 607 RTDEIAIPFGITIDFDTL-KEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKITWEDV 665
RTDEI + FG+TIDFDT+ K PH+ TLR+RDSM Q+R +V+E+ S+++DL+ ITW DV
Sbjct: 660 RTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSIVRDLANGNITWADV 719
Query: 666 QSKYPKFEAQEGSK 679
+++YP FE QE K
Sbjct: 720 EARYPLFEGQETGK 733
>sp|P41250|SYG_HUMAN Glycine--tRNA ligase OS=Homo sapiens GN=GARS PE=1 SV=3
Length = 739
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/680 (59%), Positives = 517/680 (76%), Gaps = 2/680 (0%)
Query: 1 MTDPKVEAELAPLRAAVKEQGDIVRALKAEGAPELDVKKAVAELKLRKKVLDERELKLAP 60
M E LAPLR AV++QGD+VR LK + AP++DV KAVAELK RK+VL+ +EL L P
Sbjct: 55 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP 114
Query: 61 FVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQ 120
DRAKMED LKRRFFYDQ+F+IYGG+SG YDFGP+GCALK N++ WRQ F+ EEQ
Sbjct: 115 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ 174
Query: 121 MLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQS 180
+LE+DC++LT EPVLK SGHVD+FAD MVKD+K GECFR DHL+KAHL+KL ++ K
Sbjct: 175 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE 234
Query: 181 VKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKG 240
K E ++ +LD + E+ D+ YN+KSP+T NDLS P+ FNLMF T IGP G + G
Sbjct: 235 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG 294
Query: 241 YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHF 300
YLRPETAQGIF+NFKRLLEFN G+LPFAAAQIGN+FRNEISPRSGLIRVREFTMAEIEHF
Sbjct: 295 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 354
Query: 301 CDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARI 360
DP++K H KF +V + LYSA Q+ G+ A ++ +G+AV ++ N LGYF+ RI
Sbjct: 355 VDPSEKDHPKFQNVADLHLY-LYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRI 413
Query: 361 QKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHF 420
++ VGI P+KLRFRQHM NEMAHYACDCWDAE TSYGW+E VGCADRS YDL+ H
Sbjct: 414 YLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHA 473
Query: 421 KATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
+AT V L AEK L EP+T +V+ +KG IGK +KKDAK + + LA D ++ +E
Sbjct: 474 RATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEML 533
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
LN G++ + + K F LTKDMI++K+ KT +VEE++P+VIEPSFG+GRIMY +FEH F
Sbjct: 534 LNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTF 593
Query: 541 KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGS 600
+R+GDEQRT+ + P +VAP K S+LPLS N EF PF+K LS L+++G+S KVDDS GS
Sbjct: 594 HVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGS 653
Query: 601 IGKRYARTDEIAIPFGITIDFDTL-KEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAK 659
IG+RYARTDEI + FG+TIDFDT+ K PH+ TLR+RDSM Q+R +++E+ S+++DL+
Sbjct: 654 IGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGN 713
Query: 660 ITWEDVQSKYPKFEAQEGSK 679
ITW DV+++YP FE QE K
Sbjct: 714 ITWADVEARYPLFEGQETGK 733
>sp|Q5I0G4|SYG_RAT Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus GN=Gars PE=1
SV=1
Length = 637
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/632 (60%), Positives = 479/632 (75%), Gaps = 2/632 (0%)
Query: 49 KVLDERELKLAPFVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNML 108
+VL+ +EL L P DRAKMED LKRRFFYDQ+F+IYGG+SG YDFGP+GCALK N++
Sbjct: 1 RVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNII 60
Query: 109 SAWRQFFVLEEQMLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHL 168
WRQ F+ EEQ+LE+DC++LT EPVLK SGHVD+FAD MVKD+K GECFR DHL+KAHL
Sbjct: 61 QTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHL 120
Query: 169 EKLAAEPKTPQSVKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMF 228
+KL ++ K K E ++ +LD + E+ D+ YN+KSP T NDLS P+ FNLMF
Sbjct: 121 QKLMSDKKCSAEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPTTGNDLSPPVPFNLMF 180
Query: 229 ATQIGPSGLIKGYLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIR 288
T IGP G + GYLRPETAQGIF+NFKRLLEFN G+LPFAAAQIGN+FRNEISPRSGLIR
Sbjct: 181 QTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIR 240
Query: 289 VREFTMAEIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLV 348
VREFTMAEIEHF DPT+K H KF V + LYSA Q+ G+ A ++ +G+AV ++
Sbjct: 241 VREFTMAEIEHFVDPTEKDHPKFPSV-ADLYLYLYSAKAQVTGQSARKMRLGDAVEQGVI 299
Query: 349 ANETLGYFMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGC 408
N LGYF+ RI ++ VGI P+KLRFRQHM NEMAHYACDCWDAE TSYGW+E VGC
Sbjct: 300 NNSVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGC 359
Query: 409 ADRSAYDLTQHFKATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAA 468
ADRS YDL+ H +AT V L AEK L EP+T +V+ NKG +GK +KKDAK + + L A
Sbjct: 360 ADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPNKGAVGKAYKKDAKLVLEYLGA 419
Query: 469 LDLNSVSAVEESLNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGI 528
D ++ +E L+ G++ + + K F LTKDM+S+K+ KT HVEE++PSVIEPSFG+
Sbjct: 420 CDECYITEMELLLSEKGEFTIETEGKTFQLTKDMVSVKRFQKTLHVEEVVPSVIEPSFGL 479
Query: 529 GRIMYALFEHNFKMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQN 588
GRIMY + EH F +R+GDEQRT+ + P +VAP K S+LPLS N EF PF+K LS L++N
Sbjct: 480 GRIMYTILEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRN 539
Query: 589 GISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTL-KEPHSVTLRERDSMTQVRVKVNE 647
G+S KVDDS GSIG+RYARTDEI + FGITIDFDT+ K PH+ TLR+RDSM Q+R +V+E
Sbjct: 540 GVSHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSE 599
Query: 648 VASVIKDLSLAKITWEDVQSKYPKFEAQEGSK 679
+ SV++DL+ ITW DV+++YP FE QE K
Sbjct: 600 LPSVVRDLANGNITWADVEARYPLFEGQETGK 631
>sp|O23627|SYGM1_ARATH Glycine--tRNA ligase 1, mitochondrial OS=Arabidopsis thaliana
GN=GLYRS-1 PE=2 SV=1
Length = 729
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/687 (49%), Positives = 451/687 (65%), Gaps = 27/687 (3%)
Query: 2 TDPKVEAELAPLRAAVKEQGDIVRALKAEGA--PELDVK-KAVAELKLRKKVLDERELKL 58
T+ + L+ ++V+ QG+ VRALKA A PE+D + + +LKL K + E+EL+
Sbjct: 43 TEQSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTV-EKELQS 101
Query: 59 APFVSSFD-------RAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAW 111
S R + + L+RR FY SF IY G++G +D+GP GCA+K+N+LS W
Sbjct: 102 IISSSGNGSLNREAFRKAVVNTLERRLFYIPSFKIYSGVAGLFDYGPPGCAIKSNVLSFW 161
Query: 112 RQFFVLEEQMLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHL-EK 170
RQ F+LEE MLEVDC +T E VLKASGHVD+F DLMVKD KTG C+R DHL+K + EK
Sbjct: 162 RQHFILEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEK 221
Query: 171 LAAEPKTPQSVKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFAT 230
L + E D++ ++ S ++ +++Y I +P TKN LS+P FNLMF T
Sbjct: 222 LEKDLTISAEKAAELKDVLAVMEDFSPEQLGAKIREYGITAPDTKNPLSDPYPFNLMFQT 281
Query: 231 QIGPSGLIKGYLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVR 290
IGPSGLI GY+RPETAQGIFVNFK L +N +LPFAAAQIG AFRNEISPR GL+RVR
Sbjct: 282 SIGPSGLIPGYMRPETAQGIFVNFKDLYYYNGKKLPFAAAQIGQAFRNEISPRQGLLRVR 341
Query: 291 EFTMAEIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVAN 350
EFT+AEIEHF DP +KSH KFSDV + + ++ QM G+ A+++ +GEAV V N
Sbjct: 342 EFTLAEIEHFVDPENKSHPKFSDVAKLEFL-MFPREEQMSGQSAKKLCLGEAVAKGTVNN 400
Query: 351 ETLGYFMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCAD 410
ETLGYF+ R+ F+ +GID E+LRFRQH+ NEMAHYA DCWDAE +SYGW+ECVG AD
Sbjct: 401 ETLGYFIGRVYLFLTRLGIDKERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIAD 460
Query: 411 RSAYDLTQHFKATGVRLSAEKHLPEPQTRE--IVEPVLNKGIIGKEFKKDAKTICDALAA 468
RSAYDL H +G L AE+ EP+ E ++ PV K +G FK + K + ++L A
Sbjct: 461 RSAYDLRAHSDKSGTPLVAEEKFAEPKEVEKLVITPV--KKELGLAFKGNQKNVVESLEA 518
Query: 469 LDLNSVSAVEESLNTNGKYELLVD--DKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSF 526
++ ++ +L + G+ E V K + K+M+SI K K H PSVIEPSF
Sbjct: 519 MNEEEAMEMKATLESKGEVEFYVCTLKKSVNIKKNMVSISKEKKKEHQRVFTPSVIEPSF 578
Query: 527 GIGRIMYALFEHNFKMRD---GDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSS 583
GIGRI+Y L+EH F R GDEQ PPLVAP+K ++ PL N +F+ K++S
Sbjct: 579 GIGRIIYCLYEHCFSTRPSKAGDEQLNLFRFPPLVAPIKCTVFPLVQNQQFEEVAKVISK 638
Query: 584 ELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRV 643
EL+ GIS K+D +G SIGKRYARTDE+ +PF IT+D DT SVT+RERDS QVRV
Sbjct: 639 ELASVGISHKIDITGTSIGKRYARTDELGVPFAITVDSDT-----SVTIRERDSKDQVRV 693
Query: 644 KVNEVASVIKDLSLAKITWEDVQSKYP 670
+ E ASV+ +S K+TW+DV + +P
Sbjct: 694 TLKEAASVVSSVSEGKMTWQDVWATFP 720
>sp|P38088|SYG_YEAST Glycine--tRNA ligase 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GRS1 PE=1 SV=3
Length = 690
Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust.
Identities = 323/674 (47%), Positives = 432/674 (64%), Gaps = 41/674 (6%)
Query: 37 VKKAVAELKLRKKVLDERELKLAPFVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDF 96
VKK+V + K + ++K A F+R ++E +L+ RFFY +F +YGG+SG YD+
Sbjct: 15 VKKSV-----KIKRMSVEDIKKARAAVPFNREQLESVLRGRFFYAPAFDLYGGVSGLYDY 69
Query: 97 GPMGCALKTNMLSAWRQFFVLEEQMLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGE 156
GP GCA + N++ AWR+ F+LEE MLEVDC++LT VLK SGHVD+F+D M +DLKTGE
Sbjct: 70 GPPGCAFQNNIIDAWRKHFILEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCRDLKTGE 129
Query: 157 CFRLDHLIKAHLE-KLAAEP--------------------------------KTPQSVKE 183
FR DHL++ LE +L + K V +
Sbjct: 130 IFRADHLVEEVLEARLKGDQEARGLVEDANAAAKDDAEKKKRKKKVKQIKAVKLDDDVVK 189
Query: 184 ECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLR 243
E +I+ K+DG S E+ ++++KY+I +P+T L P FNLMF T IGPSG +KGYLR
Sbjct: 190 EYEEILAKIDGYSGPELGELMEKYDIGNPVTGETLESPRAFNLMFETAIGPSGQLKGYLR 249
Query: 244 PETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDP 303
PETAQG F+NF +LLEFN+ + PFA+A IG +FRNEISPR+GL+RVREF MAEIEHF DP
Sbjct: 250 PETAQGQFLNFNKLLEFNNSKTPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHFVDP 309
Query: 304 TDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKF 363
DKSH KF++++ ++ L + T+GEAV S +V NETLGYF+ARI +F
Sbjct: 310 LDKSHPKFNEIKDIKLSFLPRDVQEAGSTEPIVKTVGEAVASRMVDNETLGYFIARIYQF 369
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKAT 423
++ +G+D KLRFRQHM NEMAHYA DCWD E TSYGW+ECVGCADRSAYDLT H K T
Sbjct: 370 LMKIGVDESKLRFRQHMANEMAHYAADCWDGELKTSYGWIECVGCADRSAYDLTVHSKKT 429
Query: 424 GVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNT 483
+L + L P E L K + G +F+KDA + L + + +++ E L
Sbjct: 430 KEKLVVRQKLDNPIEVTKWEIDLTKKLFGPKFRKDAPKVESHLLNMSQDDLASKAELLKA 489
Query: 484 NGKYELLVD--DKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFK 541
NGK+ + VD D E L ++ I++ TK HV E +PSVIEPSFGIGRI+Y++FEH+F
Sbjct: 490 NGKFTIKVDGVDGEVELDDKLVKIEQRTKVEHVREYVPSVIEPSFGIGRIIYSVFEHSFW 549
Query: 542 MRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSI 601
R D R+ L+ PPLVAP K ++PLS++ + P ++ L ++ I FK+DDSG SI
Sbjct: 550 NRPEDNARSVLSFPPLVAPTKVLLVPLSNHKDLVPVTTEVAKILRKSQIPFKIDDSGVSI 609
Query: 602 GKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKIT 661
GKRYAR DE+ PFG+TIDF++ K+ HSVTLRERDS QVR V V I+D++ +
Sbjct: 610 GKRYARNDELGTPFGVTIDFESAKD-HSVTLRERDSTKQVRGSVENVIKAIRDITYNGAS 668
Query: 662 WEDVQSKYPKFEAQ 675
WE+ F AQ
Sbjct: 669 WEEGTKDLTPFIAQ 682
>sp|Q10179|SYG_SCHPO Putative glycine--tRNA ligase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=grs1 PE=3 SV=1
Length = 652
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 312/646 (48%), Positives = 422/646 (65%), Gaps = 34/646 (5%)
Query: 63 SSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQML 122
++FDR + E+L+K+RFF+ SF IYGGISG YD+GP G AL++N++ WR+ FV+EE ML
Sbjct: 8 AAFDRTQFEELMKKRFFFSPSFQIYGGISGLYDYGPPGSALQSNLVDIWRKHFVIEESML 67
Query: 123 EVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKL-----AAEPKT 177
EVDCS+LT VLK SGHVD+FAD M KD TGE FR DHL++ LE A +
Sbjct: 68 EVDCSMLTPHEVLKTSGHVDKFADWMCKDPATGEIFRADHLVEEVLEARLKGDKEARGQN 127
Query: 178 PQSVKEECAD--------------------------IVIKLDGMSKNEMDDVLKKYNIKS 211
EE D I+ ++D +++ +++KKY+I++
Sbjct: 128 SNDQPEESDDKKKRKKKVKEIRATRLDDKTVEEYEFILAQIDNYDGDQLGELMKKYDIRN 187
Query: 212 PLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQGIFVNFKRLLEFNSGRLPFAAAQ 271
P T +L P +FNLMF TQIGPSG +KGYLRPETAQG F+NF RLLEFN+G++PFA+A
Sbjct: 188 PATNGELETPRQFNLMFETQIGPSGGLKGYLRPETAQGQFLNFSRLLEFNNGKVPFASAM 247
Query: 272 IGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDG 331
+G AFRNEISPRSGL+RVREF MAE+EHF DP +K H +F +V + +L Q++G
Sbjct: 248 VGKAFRNEISPRSGLLRVREFLMAEVEHFVDPKNKEHDRFDEVSHMPLRLLPRGV-QLEG 306
Query: 332 KP-AERITIGEAVRSNLVANETLGYFMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACD 390
K + IG+AV+ +V N TLGYFMARI F+ +GID ++RFRQHM NEMAHYACD
Sbjct: 307 KTDILEMPIGDAVKKGIVDNTTLGYFMARISLFLEKIGIDMNRVRFRQHMSNEMAHYACD 366
Query: 391 CWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLSAEKHLPEPQTREIVEPVLNKGI 450
CWDAE SYGW+ECVGCADRSAYDL+ H KAT L ++ LPEP E E +N+
Sbjct: 367 CWDAEIQCSYGWIECVGCADRSAYDLSVHSKATKTPLVVQEALPEPVVVEQFEVEVNRKK 426
Query: 451 IGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYELLVDDKEFVLTKDMISIKKSTK 510
G FK+DAK + +A+ + + L GK + V+ E + D+++I+K
Sbjct: 427 FGPRFKRDAKAVEEAMISWPESEKVEKSAQLVAEGKIIVNVNGVEHTVESDLVTIEKRKH 486
Query: 511 TFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQRTYLALPPLVAPLKASILPLSS 570
T H+ P+VIEPSFG+GRI+Y L EH + R D R L+ P +AP+KA I+PLS
Sbjct: 487 TEHIRTYTPNVIEPSFGLGRILYVLMEHAYWTRPEDVNRGVLSFPASIAPIKALIVPLSR 546
Query: 571 NPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSV 630
N EF PF+K LS++L GIS K+DDS +IG+RYAR DE+ PFG+T+DF+TL+ ++
Sbjct: 547 NAEFAPFVKKLSAKLRNLGISNKIDDSNANIGRRYARNDELGTPFGLTVDFETLQN-ETI 605
Query: 631 TLRERDSMTQVRVKVNEVASVIKDLSLAKITWEDVQSKYPKFEAQE 676
TLRERDS QVR +EV + + + K ++ED +K+ +F++ +
Sbjct: 606 TLRERDSTKQVRGSQDEVIAALVSMVEGKSSFEDALAKFGEFKSTQ 651
>sp|Q06817|SYG2_YEAST Glycine--tRNA ligase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GRS2 PE=1 SV=1
Length = 618
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/595 (49%), Positives = 405/595 (68%), Gaps = 4/595 (0%)
Query: 60 PFVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEE 119
P +S+ +R K+E L+RRFFY SF IYGG+SG +D GP GC L+ N++ WR+ F++EE
Sbjct: 2 PLMSNSERDKLESTLRRRFFYTPSFEIYGGVSGLFDLGPPGCQLQNNLIRLWREHFIMEE 61
Query: 120 QMLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEK-LAAEPKTP 178
ML+VD +LT VLK SGHVD+F D M ++ KTGE +R DHLI+ L+K L + P
Sbjct: 62 NMLQVDGPMLTPYDVLKTSGHVDKFTDWMCRNPKTGEYYRADHLIEQTLKKRLLDKDVNP 121
Query: 179 QSVKEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLI 238
Q +K I+ +DG S E++ V+++YNI P+T + L FNLMF T+IG SG +
Sbjct: 122 QDMKN-MEKILTTIDGFSGPELNLVMQEYNINDPVTNDVLDALTSFNLMFETKIGASGQL 180
Query: 239 KGYLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIE 298
K +LRPETAQG F+NF +LLE N G++PFA+A IG +FRNEISPRSGL+RVREF MAEIE
Sbjct: 181 KAFLRPETAQGQFLNFNKLLEINQGKIPFASASIGKSFRNEISPRSGLLRVREFLMAEIE 240
Query: 299 HFCDPTDKSHAKFSDVETTQMMVLYSACNQM-DGKPAERITIGEAVRSNLVANETLGYFM 357
HF DP +KSHAKF++V ++ +L + + + ++TIGEAV S +V NETLGYFM
Sbjct: 241 HFVDPLNKSHAKFNEVLNEEIPLLSRRLQESGEVQLPVKMTIGEAVNSGMVENETLGYFM 300
Query: 358 ARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLT 417
AR+ +F++++GI+ +K RFRQH+ NEMAHYA DCWD E LTSYGW+ECVGCADR+A+DLT
Sbjct: 301 ARVHQFLLNIGINKDKFRFRQHLKNEMAHYATDCWDGEILTSYGWIECVGCADRAAFDLT 360
Query: 418 QHFKATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAV 477
H K TG L+ ++ L P+ R +NK G +FK+ AK I L+ + +
Sbjct: 361 VHSKKTGRSLTVKQKLDTPKERTEWVVEVNKKFFGSKFKQKAKLIESVLSKFSQDELIRR 420
Query: 478 EESLNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFE 537
E L NG++ V+ + L +++IK T H+ E IP+VIEPSFG+GRI+Y +F+
Sbjct: 421 HEELEKNGEFTCQVNGQIVKLDSSLVTIKMKTTLQHIREYIPNVIEPSFGLGRIIYCIFD 480
Query: 538 HNFKMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDS 597
H F++R E R + + P +AP+K + +S+N F +K +S L + I FK+DDS
Sbjct: 481 HCFQVRVDSESRGFFSFPLQIAPIKVFVTTISNNDGFPAILKRISQALRKREIYFKIDDS 540
Query: 598 GGSIGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVI 652
SIGK+YAR DE+ PFGITIDF+T+K+ +VTLRER+SM QVR + +V S I
Sbjct: 541 NTSIGKKYARNDELGTPFGITIDFETIKD-QTVTLRERNSMRQVRGTITDVISTI 594
>sp|Q8SQZ6|SYG_ENCCU Glycine--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU10_1790 PE=1 SV=1
Length = 579
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/600 (45%), Positives = 378/600 (63%), Gaps = 27/600 (4%)
Query: 65 FDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEV 124
FD+ ++E +LK+RFF QS IYGG+SG YD GP G ++KTN+LS WR+ FVLEE MLE+
Sbjct: 4 FDQQQIEQILKKRFFITQSAYIYGGVSGLYDLGPPGLSIKTNILSLWRKHFVLEEDMLEI 63
Query: 125 DCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEE 184
+ + + VLKASGHVD+F D++V D +G+CFR DHL+ LEK+ S EE
Sbjct: 64 ETTTMLPHDVLKASGHVDKFCDILVFDEVSGDCFRADHLVGDALEKM--------SPTEE 115
Query: 185 CADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRP 244
+ + K+D MS E+D+++ KYNI+S L N LS+ +FNLMF TQIG G +LRP
Sbjct: 116 ISKELQKVDCMSCQEIDEIISKYNIRSTLG-NKLSKSQQFNLMFGTQIGYKGGQTMFLRP 174
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQG F+NFK+L E+N+ +LPFA+A IG A+RNEISPRSGL+RVREF AEIEHF
Sbjct: 175 ETAQGQFLNFKKLCEYNNDKLPFASASIGKAYRNEISPRSGLLRVREFDQAEIEHFVLTD 234
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
+K H KFS V+ ++ +++ +E IT+ EA+ +V NET+GY++ R F+
Sbjct: 235 EKDHPKFSTVQGIKLKLMHH-------DASEEITLKEAIERGIVCNETMGYYIGRTALFL 287
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
I +GID E LRFRQH +EMAHYA CWDAE TSYGW+ECVG ADR+ YDL+ H +
Sbjct: 288 IELGIDRELLRFRQHKKDEMAHYAKGCWDAEIYTSYGWIECVGIADRACYDLSCHEDGSK 347
Query: 425 VRLSAEKHLPEPQTREIVEPV--LNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
V L ++ L EP +EI E V L+K G + + + + + L + S+
Sbjct: 348 VDLRCKRRLAEP--KEIEEWVLKLDKKEWGAKLRDRFSVLMETVNGLSQKYIEKNVVSIG 405
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
N + L V E+ + + +KK K F VE +IP VIEPSFGIGRI+YAL EH+F +
Sbjct: 406 EN-RNRLSVKFDEYTINIECSRVKK--KVF-VENVIPDVIEPSFGIGRILYALIEHSFYL 461
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIG 602
R ++ R P +AP++ +I L EF I + L+ NG+ V++ SIG
Sbjct: 462 R--EDSRPVFRFKPAIAPVQCAIGYLIHFDEFNEHILNIKRFLTDNGLVVHVNERSCSIG 519
Query: 603 KRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKITW 662
++Y+ DE+ IPF IT D D LK+ VT+RERDSM Q+RV V + S++ + + W
Sbjct: 520 RKYSSCDELGIPFFITFDPDFLKD-RMVTIRERDSMQQIRVDVEKCPSIVLEYIRGQSRW 578
>sp|Q57681|SYG_METJA Glycine--tRNA ligase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=glyS PE=3 SV=1
Length = 577
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/592 (44%), Positives = 369/592 (62%), Gaps = 32/592 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR + SF IYGGI+G D+GP+GC LK N++S +R+ ++++E E++
Sbjct: 8 KIMDLAKRRGYLWSSFEIYGGIAGFVDYGPLGCLLKNNIISKFREQYIIKEGFYEIESPT 67
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+T VLKASGHVD F D +V+ E FR DHLI EE D+
Sbjct: 68 VTPYEVLKASGHVDNFTDPIVECKNCLESFRADHLI------------------EEFVDV 109
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+G + E+D++++K+NI+ P +L E +FNLMF T IGP G GY+RPETAQ
Sbjct: 110 --DTEGKTLKELDELIRKHNIRCPKCGGELGEVKKFNLMFVTSIGPGGKRTGYMRPETAQ 167
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ F+RL +F +LPF QIG ++RNEISPR G+IR+REFT AEIE+F P K H
Sbjct: 168 GIFIQFRRLAQFFRNKLPFGVVQIGKSYRNEISPRQGVIRLREFTQAEIEYFVHPERKEH 227
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAE-----RITIGEAVRSNLVANETLGYFMARIQKF 363
KF D+ +++ L A QMD ++ +I+IGEAV ++ ++T+ YF+A ++F
Sbjct: 228 EKF-DLVKDEVVPLLPAERQMDENLSDDEKVIKISIGEAVEKGIIRHQTIAYFIALTKRF 286
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
+ ++GID +K+RFRQH+ NEMAHYA DCWDAE T +GW+ECVG ADR+ YDL H
Sbjct: 287 LEAIGIDKDKIRFRQHLPNEMAHYAIDCWDAEIYTERFGWIECVGIADRTDYDLRSHSAH 346
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+GV LS L E + E E LN ++GK FKKD K I + L +++
Sbjct: 347 SGVELSVFVELDEEREIETYEINLNYKVVGKIFKKDTKAIEAYINNLSEKEKEEFVKNIE 406
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
+GK + +D KEF + KD + IKK K E++IP VIEPS+GI RI Y L EH+++
Sbjct: 407 NDGKVIINIDGKEFEILKDYVEIKKVKKVIKGEKVIPHVIEPSYGIDRITYCLLEHSYRE 466
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIG 602
+E R YL L P +AP+KA +LPL + + K + L +NGI + DDS G+IG
Sbjct: 467 ---EEDRVYLDLKPSIAPIKAYVLPLVNKDDMPKIAKEIEQMLRENGIIAEYDDS-GAIG 522
Query: 603 KRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
+RY R DEI +PF IT+D TL E +VT+RER++ QVRVK++E+ +K+
Sbjct: 523 RRYMRADEIGVPFCITVDGQTL-EDRTVTVRERNTREQVRVKIDELVDYLKE 573
>sp|A9A885|SYG_METM6 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C6 / ATCC
BAA-1332) GN=glyS PE=3 SV=1
Length = 574
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/593 (44%), Positives = 364/593 (61%), Gaps = 33/593 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR F SF IYGGI+G +D+GP+G LK N+++ WR+ +++ E E+D
Sbjct: 6 KIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+T VLKASGHV+ F D +V+ E FR DH+I+ +++
Sbjct: 66 VTPYEVLKASGHVENFTDPLVECKGCLESFRADHIIEENVD------------------- 106
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +G + E+ ++++K NIK P + + FNLMFAT IGP G ++RPETAQ
Sbjct: 107 -VDTEGKTLQELQEMIEKNNIKCPKCGGEFKDVSTFNLMFATSIGPGGKRAAFMRPETAQ 165
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ FKR+ +F +LPF A QIG A+RNEISPR G+IR+REFT AE E F D K +
Sbjct: 166 GIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREFTQAEGEFFIDSRKKEN 225
Query: 309 -AKFSDVETTQMMVLYSACNQMDGKPAE----RITIGEAVRSNLVANETLGYFMARIQKF 363
KF V+ T + +L + + AE R+++ +AV++ ++A+E + Y++A +KF
Sbjct: 226 FEKFESVKDTVLPLLSGKNQENESLSAEEKIVRMSLSDAVKNGIIAHEAIAYYIAVTKKF 285
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GID KLRFRQH+ NEMAHYA DCWDAE T YGW+ECVG ADR+ YDL H K
Sbjct: 286 LMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTNYDLLAHMKN 345
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+G LS L E E E LN ++G+ FK DAK + ++L LD + + E+L
Sbjct: 346 SGEDLSVFVELDEEHEIEAYEIELNYKLVGRTFKGDAKVLEESLKELDDKKMEELVEALE 405
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
T GKY L ++F L K+ ++ KK K E+IIP VIEPS+GI RI Y + EH FK
Sbjct: 406 TEGKYTLKTCKRDFELLKEYLTAKKVKKIVKGEKIIPHVIEPSYGIDRITYCVMEHAFKE 465
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKM-LSSELSQNGISFKVDDSGGSI 601
+E RT + V+P+K + PL N E P I M L ++L +NG+ + DDS G+I
Sbjct: 466 ---EEDRTVMGFSNAVSPIKVGVFPL-VNKEGMPEIAMDLKNKLRENGLIAEYDDS-GAI 520
Query: 602 GKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
G+RY R DE+ PF ITID +TL + +SVT+RERDS Q R+ +NEV S IKD
Sbjct: 521 GRRYMRMDEVGTPFCITIDGETLVD-NSVTIRERDSRAQFRIPINEVVSYIKD 572
>sp|Q6M0Q7|SYG_METMP Glycine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=glyS PE=3 SV=1
Length = 574
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/595 (44%), Positives = 363/595 (61%), Gaps = 37/595 (6%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR F SF IYGGI+G +D+GP+G LK N+++ WR+ +++ E E+D
Sbjct: 6 KIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+T VLKASGHV+ F D +V+ E FR DH+I+ +++
Sbjct: 66 VTPYEVLKASGHVENFTDPLVECKDCLESFRADHIIEENVD------------------- 106
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +G + E+ ++++K NI+ P + E FNLMFAT IGP G ++RPETAQ
Sbjct: 107 -VDTEGKTLQELQEMIEKNNIRCPKCGGEFKEVSTFNLMFATSIGPGGKRAAFMRPETAQ 165
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ FKR+ +F +LPF A QIG A+RNEISPR G+IR+REFT AE E F D K +
Sbjct: 166 GIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREFTQAEGEFFIDSRKKEN 225
Query: 309 AKFSDVETTQMMV--LYSACNQMDGKPAE-----RITIGEAVRSNLVANETLGYFMARIQ 361
F E+ + MV L S NQ D + ++++ +AV++ ++A+E + Y++A +
Sbjct: 226 --FEKFESVKDMVLPLLSGKNQEDESLSSEEKVVKMSLSDAVKNGIIAHEAIAYYIAVTK 283
Query: 362 KFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHF 420
KF++ +GID KLRFRQH+ NEMAHYA DCWDAE T YGW+ECVG ADR+ YDL H
Sbjct: 284 KFLMEIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGVADRTNYDLLAHM 343
Query: 421 KATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
K +G LS L E E E LN ++G+ FK DAK + ++L LD + + E+
Sbjct: 344 KNSGDDLSVFVELDEEHEIEAYEIELNYKLVGRTFKGDAKVLEESLKELDDKKMEELVEA 403
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
L T GKY L ++F + K+ ++ KK K E+IIP VIEPS+GI RI Y + EH F
Sbjct: 404 LETEGKYVLKTCKRDFEILKEYLTAKKVKKIVKGEKIIPHVIEPSYGIDRITYCVMEHAF 463
Query: 541 KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKM-LSSELSQNGISFKVDDSGG 599
K DE RT + V+P+K + PL N E P I M L ++L +NG+ + DDS G
Sbjct: 464 KE---DEDRTVMGFSNAVSPIKVGVFPL-VNKEGMPEIAMDLKNKLRENGLIAEYDDS-G 518
Query: 600 SIGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
+IG+RY R DE+ PF ITID +TLK+ SVT+RERDS Q R+ +NEV IKD
Sbjct: 519 AIGRRYMRMDEVGTPFCITIDGETLKD-RSVTIRERDSREQFRIPINEVVPYIKD 572
>sp|A6VIK1|SYG_METM7 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C7 / ATCC
BAA-1331) GN=glyS PE=3 SV=1
Length = 574
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/593 (43%), Positives = 364/593 (61%), Gaps = 33/593 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR F SF IYGGI+G +D+GP+G LK N+++ WR+ +++ E E+D
Sbjct: 6 KIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+T VLKASGHV+ F D +V+ + E FR DH+I+ +++
Sbjct: 66 VTPYEVLKASGHVENFTDPLVECKECLESFRADHIIEENVD------------------- 106
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +G + E+ ++++K NIK P + E FNLMFAT IGP G ++RPETAQ
Sbjct: 107 -VDTEGKTLQELQEMIEKNNIKCPKCGGEFKEVSTFNLMFATSIGPGGKRAAFMRPETAQ 165
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ FKR+ +F +LPF A QIG A+RNEISPR G+IR+REFT AE E F D K +
Sbjct: 166 GIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREFTQAEGEFFIDSRKKEN 225
Query: 309 -AKFSDVETTQMMVLYSACNQMDGKPAE----RITIGEAVRSNLVANETLGYFMARIQKF 363
KF V+ + +L + + AE R+++ +AV++ ++A+E + Y++A +KF
Sbjct: 226 FEKFESVKDMVLPLLPGKNQENESLSAEEKIVRMSLSDAVKNGVIAHEAIAYYVAVTKKF 285
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GID KLRFRQH+ NEMAHYA DCWDAE T YGW+ECVG ADR+ YDL H K
Sbjct: 286 LMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTNYDLLAHMKN 345
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+ LS L E + E+ E LN ++G+ FK DAK + ++L L+ + + E+L
Sbjct: 346 SSEDLSVFVELDEDKEVEVYEIELNYKLVGRTFKGDAKILEESLKELNDKKMEELVEALE 405
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
T GKY L ++F + K+ ++ KK K E+IIP VIEPS+GI RI Y + EH FK
Sbjct: 406 TEGKYVLKTCKRDFEILKEYLTAKKVKKIVKGEKIIPHVIEPSYGIDRITYCVMEHAFKE 465
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKM-LSSELSQNGISFKVDDSGGSI 601
+E RT + V+P+K + PL N E P I M L ++L +NG+ + DDS G+I
Sbjct: 466 ---EEDRTVMGFSNAVSPIKVGVFPL-VNKEGMPEIAMDLKNKLRENGLIAEYDDS-GAI 520
Query: 602 GKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
G+RY R DE+ PF +TID +TL + SVT+RERDS Q R+ +NEV S IKD
Sbjct: 521 GRRYMRMDEVGTPFCVTIDGETLTD-RSVTIRERDSREQFRIPINEVVSYIKD 572
>sp|A4FZX1|SYG_METM5 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=glyS PE=3 SV=1
Length = 575
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/593 (43%), Positives = 363/593 (61%), Gaps = 33/593 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR F SF IYGGI+G +D+GP+G LK N+++ WR+ +++ E E+D
Sbjct: 6 KIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+T VLKASGHV+ F D +V+ E FR DH+I+ +++
Sbjct: 66 VTPYEVLKASGHVENFTDPLVECKSCLESFRADHIIEENVD------------------- 106
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +G + E+ ++++K NIK P + E FNLMFAT IGP G ++RPETAQ
Sbjct: 107 -VDTEGKTLQELQEMIEKNNIKCPKCGGEFKEVSTFNLMFATSIGPGGKRAAFMRPETAQ 165
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ FKR+ +F +LPF A QIG A+RNEISPR G+IR+REFT AE E F D K +
Sbjct: 166 GIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREFTQAEGEFFIDSRKKEN 225
Query: 309 -AKFSDVETTQMMVLYSACNQMDGKPAE----RITIGEAVRSNLVANETLGYFMARIQKF 363
KF V+ + +L + + AE R+++ +AV++ ++A+E + Y++A +KF
Sbjct: 226 FEKFESVKEIVLPLLSGKNQENESLSAEEKIVRMSLSDAVKNGIIAHEAIAYYIAVTKKF 285
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GID KLRFRQH+ NEMAHYA DCWDAE T YGW+ECVG ADR+ YDL H K
Sbjct: 286 LMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTNYDLLAHMKN 345
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+ LS L E + E+ E LN ++G+ FK D+K + ++L LD + + E+L
Sbjct: 346 SSEDLSVFVELDEDKEIEVYEIELNYKLVGRTFKGDSKVLEESLKELDDKKMEELVEALE 405
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
T GKY L ++F L K+ ++ KK KT E+IIP VIEPS+GI RI Y + EH FK
Sbjct: 406 TEGKYVLSTCKRDFELLKEYLTAKKVKKTVKGEKIIPHVIEPSYGIDRITYCVMEHAFKE 465
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKM-LSSELSQNGISFKVDDSGGSI 601
DE RT + V+P+K + PL N E P I M L ++L +NG+ + DDS G+I
Sbjct: 466 ---DEDRTVMGFSNAVSPIKVGVFPL-VNKEGMPEIAMDLKNKLRENGLIAEYDDS-GAI 520
Query: 602 GKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
G+RY R DE+ PF +TID +TL + SVT+RERDS Q R+ +NEV IKD
Sbjct: 521 GRRYMRMDEVGTPFCVTIDGETLTDS-SVTIRERDSREQFRIPINEVVPYIKD 572
>sp|A6URK3|SYG_METVS Glycine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=glyS PE=3 SV=1
Length = 574
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/592 (41%), Positives = 360/592 (60%), Gaps = 31/592 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
K+ DL KRR F SF IYGGI+G +D+GP+G LK+++++ WR+ +++ E E+D
Sbjct: 6 KIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKSSVINTWRKHYIINEGFYEIDSPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+ VLKASGHV+ F D +V+ E FR DH+I+ ++E
Sbjct: 66 VNPYEVLKASGHVENFTDPLVECKSCLESFRADHIIEENIE------------------- 106
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +G + NE+ ++++K NIK P + E FNLMFAT IGP G ++RPETAQ
Sbjct: 107 -VDTEGKTLNELQEMIEKNNIKCPKCGGEFKEVNTFNLMFATSIGPGGKRAAFMRPETAQ 165
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIF+ FKR+ +F +LP+ A QIG A+RNEISPR G+IR+REFT AE E F D K +
Sbjct: 166 GIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREFTQAEAEFFIDSRKKEN 225
Query: 309 -AKFSDVETTQMMVLYSACNQMDGKPAE----RITIGEAVRSNLVANETLGYFMARIQKF 363
KF V+ + +L + + +E R+++G+AV++ ++A+E + Y++A +KF
Sbjct: 226 FEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKIIAHEAIAYYIAVTKKF 285
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GID KLRFRQH+ NEMAHYA DCWDAE T YGW+ECVG ADR+ YDL H K
Sbjct: 286 LMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTDYDLRAHMKN 345
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+G LS E + E+ E LN ++GK FK DAK + ++L L + + + ++L
Sbjct: 346 SGEDLSVFVEFDESKEIEVYEIELNYKLVGKTFKGDAKILEESLKELSNDKMEELIKTLK 405
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
N KY L ++F + + +++KK K E+I+P VIEPS+GI RI Y + EH FK
Sbjct: 406 NNEKYILKTCKRDFEVLNEYLTVKKVKKNVTGEKIVPHVIEPSYGIDRITYCVIEHAFKE 465
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIG 602
D RT LA V+P+K + PL + + L ++ +NGI + DDS G+IG
Sbjct: 466 ED---DRTLLAFVNTVSPVKVGVFPLVNKEGMDEIAENLKNKFRKNGIIAEYDDS-GAIG 521
Query: 603 KRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
+RY R DEI PF +T+D +TLK+ ++VT+RERDS Q R+ ++ V IK+
Sbjct: 522 RRYMRMDEIGTPFCVTVDGETLKD-NTVTIRERDSREQFRIPLDGVVDYIKE 572
>sp|A0B5U4|SYG_METTP Glycine--tRNA ligase OS=Methanosaeta thermophila (strain DSM 6194 /
PT) GN=glyS PE=3 SV=1
Length = 577
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/589 (40%), Positives = 350/589 (59%), Gaps = 35/589 (5%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
++ +L +RR F SF +YGG +G YD+GP+G LK + WR+FFV+ E E++C
Sbjct: 6 QVTELARRRGFMWPSFELYGGAAGFYDYGPLGARLKRRIEDIWRRFFVIGEGFAEIECPT 65
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
+ +E V +ASGH+ F+D + + + E +R DHLIK I
Sbjct: 66 IGIEEVFRASGHLSGFSDPLTECKECKEIYRADHLIK---------------------HI 104
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
V D +S E+ ++K+ +I P +LSE EFNLMF T IGP GYLRPETAQ
Sbjct: 105 VEVPDALSAEEIYRMIKENDITCPECGGELSEVYEFNLMFRTAIGPGNRHPGYLRPETAQ 164
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
G+F+NF+RLL + LPF A QIG ++RNEISPR G+IR+REF+ AE E F DP +K H
Sbjct: 165 GMFINFQRLLRYYRDSLPFGAVQIGRSYRNEISPRQGVIRLREFSQAEAEVFIDPRNKQH 224
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
+FS+V+ ++ LYS Q G+ E +++GEAV ++A+E L YF+AR +++++VG
Sbjct: 225 PRFSEVKDLRLR-LYSREAQERGQ-VEEMSVGEAVERGIIAHEILAYFVARTYEYLLAVG 282
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKATGVRL 427
+D E+LRFRQH +EMAHYA DCWDAE L GW+E VG ADR+ YDL H + L
Sbjct: 283 VDRERLRFRQHKADEMAHYAADCWDAEVLLDRLGWIEIVGIADRTDYDLRSHMALSKANL 342
Query: 428 SAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKY 487
S H PEP R+ V + ++G FK AK I DAL A+ + +
Sbjct: 343 SVFVHYPEPVRRKRVAVKPDMKVLGPRFKGRAKAIADALQAMSVADLKG--------DTI 394
Query: 488 ELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRD-GD 546
++ VD + + + + ++S+++ + E ++P VIEPSFGI RI+Y + EH++ D
Sbjct: 395 KITVDGETYEIERRLVSVEEIEEEIRGEYVVPHVIEPSFGIDRILYTVLEHSYHEEPVED 454
Query: 547 EQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYA 606
E R L P ++P+ +ILPL E + + E + G+ + D S GSIG+RY
Sbjct: 455 EMRVVLRFLPGISPIDVAILPLMDKDELVEPARRIFDEFRRCGMLAEFDTS-GSIGRRYR 513
Query: 607 RTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
R DEI P+ IT+D+ TL E +VT+R+RD+M Q+R++ + +I+DL
Sbjct: 514 RNDEIGTPYCITVDYQTL-EDGTVTVRDRDTMQQIRIEADRAVDIIRDL 561
>sp|O29346|SYG_ARCFU Glycine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=glyS PE=3
SV=1
Length = 570
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/597 (42%), Positives = 357/597 (59%), Gaps = 61/597 (10%)
Query: 70 MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSIL 129
ME L++R F + QSF IYGG++G D+ P+G L+ + + WR++FV+ E+ E+D +
Sbjct: 7 MEMLIRRGFLW-QSFEIYGGMAGFIDYAPLGNNLRRKIENIWRKYFVINERAAEIDTPTI 65
Query: 130 TLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAE-PKTPQSVKEECADI 188
+E V ASGH F D+ ++ G +R DH +K EKL E +T ++VKE
Sbjct: 66 GIEEVFIASGHATSFTDVAIECENCGRVYRADHYVK---EKLGIEVDETVEAVKE----- 117
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
V++ Y++K +P NLMF+T IGP KGYLRPETAQ
Sbjct: 118 --------------VMEVYDLKCECG-GRFKDPAPMNLMFSTTIGPGKGKKGYLRPETAQ 162
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
G+FV+FKRL F +LPF AQIG A+RNEISPR G+IR+REF AE+E F P +K H
Sbjct: 163 GMFVDFKRLANFFREKLPFGVAQIGRAYRNEISPRQGVIRLREFNQAELEFFVHPGEKKH 222
Query: 309 AKFSDVETTQMMVLYSA-----CNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKF 363
FS LY+ ++ D + IT+ EAV ++AN+ L YF+ + ++F
Sbjct: 223 PHFS---------LYAKDVVKLVDKFDSQ--HEITLEEAVEKGIIANQILAYFIGKTRRF 271
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKAT 423
++ +GI EKLRFRQH E AHYA DCWDAE LTSYGW+E VG ADR+ YDL +H K +
Sbjct: 272 LLEIGIKDEKLRFRQHKDVERAHYATDCWDAEVLTSYGWIEVVGIADRTNYDLKRHSKFS 331
Query: 424 GVRLSAEKHLPEP---QTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
G LS EP + R+IV P+L+K +G EF++ AK + +AL AL+ VE
Sbjct: 332 GEDLSVFVPYEEPVKVKRRKIV-PILSK--LGPEFRQKAKKVAEALEALN------VEAD 382
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
L+ + E+ VD ++ +TK+ I++ + E++IP VIEPSFG+ RI Y++ EH F
Sbjct: 383 LD---EVEVEVDGEKVKVTKEFFEIQEVEEEVTGEKVIPHVIEPSFGLDRITYSVLEHAF 439
Query: 541 --KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSG 598
+ DG+E+R L L V+P++ ++LPL S F+ + L + GI DDS
Sbjct: 440 DKDVVDGEERRV-LRLKRWVSPIEVAVLPLLSREPFESKGMEIVQMLREEGIFTDYDDS- 497
Query: 599 GSIGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
GSIG+RY R DEI PF +T+D T E +VT+R+RD+ QVRVK+ E+ S++K+L
Sbjct: 498 GSIGRRYRRFDEIGTPFCVTVDHQTF-EDETVTIRDRDTTAQVRVKLGELPSILKEL 553
>sp|O27874|SYG_METTH Glycine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=glyS PE=3 SV=1
Length = 565
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/584 (39%), Positives = 344/584 (58%), Gaps = 37/584 (6%)
Query: 75 KRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSILTLEPV 134
++R F SF IY G++G D+GP+G LK +++ WR+F+V+ E E++ + E
Sbjct: 14 RKRGFLWSSFEIYSGVAGFVDYGPLGATLKNKIMNRWREFYVVREGFYEIESPTIMPEEA 73
Query: 135 LKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIKLDG 194
LKASGHVD F D M + + + +R DH+I E T + V +G
Sbjct: 74 LKASGHVDHFNDPMTQCKECMDVYRADHII---------EDATGRDV-----------EG 113
Query: 195 MSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQGIFVNF 254
+ E+ +++ I+ P L+ +NLMF T IG G GYLRPETAQGIF+ F
Sbjct: 114 LENQELTEIISDEGIRCPRCGGHLTHVWSYNLMFQTLIGARGKKTGYLRPETAQGIFIPF 173
Query: 255 KRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHAKFSDV 314
KRLL F RLPF Q+G ++RNEISPR G+IR+REFT AE E F DP K+H F +V
Sbjct: 174 KRLLRFFRNRLPFGVVQLGKSYRNEISPRQGVIRLREFTQAEAEIFVDPEHKTHPDFEEV 233
Query: 315 ETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGIDPEKL 374
+ ++ LY A QM+ +T EA+ + ++++E L Y + ++F++ +GI + L
Sbjct: 234 K-EDILRLYPAGRQMEESGTVDMTAAEALEAGVISSEVLTYHLCLAKRFLMDIGIPEDAL 292
Query: 375 RFRQHMGNEMAHYACDCWDAECLT-SYGWVECVGCADRSAYDLTQHFKATG--VRLSAEK 431
RFRQH+ +EMAHYA DCWD E T SYGW+E +G ADR+ YDL H + +G +R+ E
Sbjct: 293 RFRQHLPSEMAHYAIDCWDVEAFTDSYGWIEIIGIADRTDYDLRSHSQHSGEDLRVFIEY 352
Query: 432 HLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYELLV 491
P + V+P + K +G +F+KDA I AL+ +D V +E++L+ G++ L
Sbjct: 353 DEPRRIRKRAVKPDMGK--LGPKFRKDAARIASALSEVD---VEEIEKALDEEGRFIL-- 405
Query: 492 DDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQRTY 551
+ EF + D +S + + ++ P VIEPSFGI RI+Y L H+ + DG +RTY
Sbjct: 406 -EGEFEILPDDVSFEDVEEVVTGRKVYPHVIEPSFGIDRIIYTLLLHSL-VDDG--ERTY 461
Query: 552 LALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEI 611
LPP VAP++ ++LPL + E + L ++G + DS G+IG+RYAR DEI
Sbjct: 462 FRLPPHVAPVEVTVLPLVNREEMVMTALEIERNLRRSGFIAEF-DSSGTIGRRYARADEI 520
Query: 612 AIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
+PF +T+D +TL E +VTLR RD +QVRVK+ E+ ++ L
Sbjct: 521 GVPFAVTVDHETL-EDGTVTLRNRDDCSQVRVKIEELVPTLEKL 563
>sp|Q8U0G2|SYG_PYRFU Glycine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=glyS PE=3 SV=1
Length = 568
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/593 (38%), Positives = 340/593 (57%), Gaps = 32/593 (5%)
Query: 65 FDRAK-MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE 123
FD+ + ++DL++RR F SF IYGG G YD+GP+G +K + R+ F+ E E
Sbjct: 3 FDKYEYLQDLMRRRGFAWGSFEIYGGARGFYDYGPLGATIKRKIEKKIREAFI-REGFFE 61
Query: 124 VDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKE 183
++ +T E V ASGHV++F D +V+ K G FR DHLI+ L
Sbjct: 62 IETPDITPEQVFIASGHVEKFVDPLVECKKCGARFRADHLIEETLG-------------- 107
Query: 184 ECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLR 243
I ++G S EM +++++NI+ P +LS+ FNLMF T IGP K YLR
Sbjct: 108 ------IDVEGKSAEEMTKIIREHNIRCPECGGELSDVWYFNLMFETYIGPYKDKKAYLR 161
Query: 244 PETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDP 303
PETAQGIFVNFKRL F +LPF QIG A+RNEISPR G+IR+REFT AE+E F +P
Sbjct: 162 PETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFTQAEVEIFFNP 221
Query: 304 TDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKF 363
+ H F +V+ +++ LY +Q+ +T EAV+ V N Y+M I++
Sbjct: 222 NETEHPHFDEVK-DEVLRLYPIEHQLKDLGMIELTAEEAVKKGYVMNTFFAYYMVMIKRI 280
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GI +K+RFRQ + E AHY+ D WDAE + +GWVECVG A R+ YDL++H K
Sbjct: 281 LLDIGIPEDKIRFRQQLPEERAHYSADTWDAEIYSERFGWVECVGLAYRTDYDLSRHMKM 340
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+G L+ H +P+ + + LN +G + K+ K I + L ++ + + E LN
Sbjct: 341 SGADLTVMIHYDKPKIVKKLNVTLNMKKVGPKLKEKVKEINEKLKSMSQEELRKLVEELN 400
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
NGK ++++ E L K+ + IK+ + E+I+P V+EPSFGI R Y L E++ +
Sbjct: 401 ANGK--VIIEGHE--LEKEDLIIKEVEEKIQGEKIVPHVLEPSFGIDRPFYLLLENSLTV 456
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIG 602
++ R YL + +AP++ ++LPL + + L + G V D SIG
Sbjct: 457 --DEDGRVYLKIKKDMAPIEVAVLPLVAKEPLTTIAYEIYRNLQKEGF-IVVYDEKDSIG 513
Query: 603 KRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
KRY R DEI P+ +T+D T E +VT+R+RD+ Q+RVK+ EV +K+L
Sbjct: 514 KRYMRYDEIGTPYCVTVDNQT-PEDGTVTIRDRDTREQIRVKIEEVPRKLKEL 565
>sp|Q9V176|SYG_PYRAB Glycine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=glyS PE=3 SV=1
Length = 571
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 341/593 (57%), Gaps = 32/593 (5%)
Query: 65 FDRAK-MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE 123
FD+ + ++DL++RR F SF IYGG G YD+GP+G +K + R+ F+ E E
Sbjct: 5 FDKYEYLQDLMRRRGFAWGSFEIYGGSRGFYDYGPLGATIKRKIEKKIREAFI-REGFFE 63
Query: 124 VDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKE 183
++ +T E V ASGHV++F D +V+ K G FR DHLI+ L
Sbjct: 64 IETPDITPEQVFIASGHVEKFVDPIVECKKCGARFRADHLIEETLG-------------- 109
Query: 184 ECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLR 243
I ++G S EM +++++NIK P +L + FNLMF T IGP K YLR
Sbjct: 110 ------IDVEGKSAEEMTKIIREHNIKCPECGGELGDVFYFNLMFETYIGPYKDKKAYLR 163
Query: 244 PETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDP 303
PETAQGIFVNFKRL F +LPF QIG A+RNEISPR G+IR+REFT AE+E F +P
Sbjct: 164 PETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFTQAEVEIFFNP 223
Query: 304 TDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKF 363
+ H F +V+ ++ LY NQ+ +T EAV+ + N Y++ I+K
Sbjct: 224 NETEHPHFDEVKHEKLR-LYPIENQLKDLGMIELTAEEAVKKGYLMNTFFAYYLVMIKKI 282
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKA 422
++ +GI +K+RFRQ + E AHY+ D WDAE + +GWVECVG A R+ YDL++H K
Sbjct: 283 LLDIGIPEDKIRFRQQLPEERAHYSADTWDAEVYSERFGWVECVGLAYRTDYDLSRHMKM 342
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLN 482
+G L+ H +P+ + ++ LN +G + KKDAK I + + A+ + + + LN
Sbjct: 343 SGADLTVMIHYDKPKIVKRLKVSLNMKSVGPKLKKDAKRINEKIQAMSEEELRELVKKLN 402
Query: 483 TNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKM 542
GK +++D E L+KD IK+ + E+IIP V+EPSFGI R Y L E++ +
Sbjct: 403 EEGK--IVIDGYE--LSKDDFIIKEVEEKVTGEKIIPHVLEPSFGIDRPFYLLLENSLTI 458
Query: 543 RDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIG 602
++ R YL + +AP++ ++LPL + L +L + G V D SIG
Sbjct: 459 --DEDGRIYLKIKKDMAPIEVAVLPLVAKEPLTKIAYDLFRKLQKEGF-IVVYDEKDSIG 515
Query: 603 KRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
KRY R DEI P+ +TID T + +VT+R+RD+ Q+RVK+ +V +K+L
Sbjct: 516 KRYMRYDEIGTPYCVTIDNQTPID-GTVTIRDRDTREQIRVKLEDVPRKLKEL 567
>sp|Q8TYY9|SYG_METKA Glycine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=glyS PE=3 SV=1
Length = 571
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/599 (37%), Positives = 339/599 (56%), Gaps = 43/599 (7%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSI 128
++ ++ +RR F +F IYGG G YD+GP+G LK + WR+++V +E +E++
Sbjct: 8 RIMEIARRRGFILPAFRIYGGARGFYDYGPLGALLKRKIEEKWREYYVHKEGFMEIEAPN 67
Query: 129 LTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADI 188
L + V +ASGHV+ F D M + GE FR DHL + L
Sbjct: 68 LLIGEVFEASGHVEHFIDPMTHCSECGEFFRADHLAEEEL-------------------- 107
Query: 189 VIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQ 248
+ +GMS E++D++++++++ P +L+E EFNLMF T IGP GYLRPETAQ
Sbjct: 108 GVDAEGMSPEELEDLIREHDLRCPECGGELAEVTEFNLMFDTNIGPKEGRTGYLRPETAQ 167
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
IF+ FK L + +LPF QIG A+RNEISPR G+IR+REFT AE E F DP +K +
Sbjct: 168 AIFIQFKDLYRWARQKLPFGVVQIGRAYRNEISPRQGVIRLREFTQAEAEVFFDPEEKEY 227
Query: 309 AKFSDVETTQMMVLYSACNQM--DGKPAERITIGEAVRSNLVANETLGYFMARIQKFMIS 366
F +++ Y Q +G+ E +++ EAV +V+ + +GYF+ ++ +
Sbjct: 228 PGFERY-ADEVLKFYPIEEQRKENGEMLE-MSVREAVEEGMVS-QPIGYFLGLTKRMLNE 284
Query: 367 VGIDPEKLRFRQHMGNEMAHYACDCWDAEC-LTSYGWVECVGCADRSAYDLTQHFKATGV 425
+G+ E +R RQH+ E AHYA DCWD E L +GWVE VG ADR+ YDL +H + +G
Sbjct: 285 MGVPNEAIRSRQHLPEERAHYASDCWDVEVKLERFGWVEVVGIADRTDYDLKKHSEHSGE 344
Query: 426 RLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNG 485
L A + L EP+ EPV+ + +G FK DA I +AL + S ++ L
Sbjct: 345 DLRAFRELEEPKIVYRPEPVMKE--LGPRFKSDAPKIAEALRRITAESEDELKGGLTVE- 401
Query: 486 KYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDG 545
VD KE + + I K T E P VIEPS+GI RI+Y + EHNF
Sbjct: 402 -----VDGKEVEVPPECYEIVKEKVT--GERFYPHVIEPSYGIDRILYCVLEHNF----- 449
Query: 546 DEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRY 605
D + P +AP++ + PL + + + ++ L + G + + DDS GSIG+RY
Sbjct: 450 DPEEGVFRFPAWLAPIEVGVFPLLKRSDMVEYARRVARMLREEGFTVEYDDS-GSIGRRY 508
Query: 606 ARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLAKITWED 664
AR DEI +P+ +T+D +TL E +VT+R+RD+ QVRV+V+E+A V++ L + +E+
Sbjct: 509 ARADEIGVPYCVTVDHETL-EDDTVTIRDRDTTEQVRVEVDELADVLRGLIDGDLEFEE 566
>sp|O59235|SYG_PYRHO Glycine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=glyS PE=3
SV=1
Length = 570
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 338/595 (56%), Gaps = 32/595 (5%)
Query: 63 SSFDRAK-MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM 121
FD+ + ++DL++RR F SF IYGG G YD+GP+G +K + R+ F+ E
Sbjct: 3 GKFDKYEYLQDLMRRRGFAWGSFEIYGGSRGFYDYGPLGATIKRKIERKIREAFI-REGF 61
Query: 122 LEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSV 181
E++ +T E V ASGHV++F D +V+ K G FR DHLI+ L
Sbjct: 62 FEIETPDITPEQVFIASGHVEKFVDPVVECKKCGMRFRADHLIEEFLG------------ 109
Query: 182 KEECADIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGY 241
I ++G S EM +++++ +K P +LS+ FNLMF T IGP K Y
Sbjct: 110 --------IDVEGKSAEEMSRIIREHGLKCPECGGELSDVFYFNLMFETYIGPYKDKKAY 161
Query: 242 LRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFC 301
LRPETAQGIFVNFKRL F +LPF QIG A+RNEISPR G+IR+REFT AE E F
Sbjct: 162 LRPETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFTQAEAEIFF 221
Query: 302 DPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQ 361
+P + H F++V+ ++ LY NQ+ +T EAV+ V N Y+M I+
Sbjct: 222 NPNETEHPHFNEVKHEKLK-LYPIENQLKELGEVEVTAEEAVKRGYVMNSFFAYYMVMIK 280
Query: 362 KFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHF 420
K ++ +GI +K+RFRQ + E AHY+ D WDAE + +GWVECVG A R+ YDL++H
Sbjct: 281 KILLDIGIPEDKIRFRQQLPEERAHYSADTWDAEVYSERFGWVECVGLAYRTDYDLSRHM 340
Query: 421 KATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEES 480
K +G L+ H +P+ + ++ LN +G + K DAK I + + ++D + + +
Sbjct: 341 KMSGADLTVMIHYDKPKVVKRIQVSLNMKKVGPKLKADAKKINEIIKSMDQKELEKLVKD 400
Query: 481 LNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNF 540
LN GK V + + L+K+ +K+ + E+I+P V+EPSFGI R Y L E++
Sbjct: 401 LNEKGK----VTIEGYELSKEDFIVKEVEEKITGEKIVPHVLEPSFGIDRPFYLLLENSL 456
Query: 541 KMRDGDEQRTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGS 600
+ ++ R YL + +AP++ ++LPL + + L + G V D S
Sbjct: 457 TV--DEDGRIYLKIKKDMAPIEVAVLPLVAKEPLTTIAYEIYRTLQKEGF-IVVYDEKDS 513
Query: 601 IGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
IGKRY R DEI P+ +T+D T E +VT+R+RD+ Q+RVK+ E+ +K+L
Sbjct: 514 IGKRYMRYDEIGTPYCVTVDNQT-PEDGTVTIRDRDTREQIRVKIEELPRKLKEL 567
>sp|C5A1H0|SYG_THEGJ Glycine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=glyS PE=3 SV=1
Length = 570
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/587 (37%), Positives = 338/587 (57%), Gaps = 32/587 (5%)
Query: 70 MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSIL 129
++DL++RR F SF IYGG G YD+GP+G +K + R+ F E E++ +
Sbjct: 11 LQDLMRRRGFAWGSFEIYGGSRGFYDYGPLGATIKRKIEQKIREAF-QREGFFELETPDI 69
Query: 130 TLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIV 189
T E V ASGHV++F D +V+ K G FR DH+I+ L
Sbjct: 70 TPEKVFIASGHVEKFVDPLVECRKCGARFRADHIIEEALG-------------------- 109
Query: 190 IKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQG 249
+ ++G+S E+ ++++++I+ P +LS+ FNLMF T+IGP G KGYLRPETAQG
Sbjct: 110 MDVEGLSAEELTKLIREHDIRCPECGGELSDVWYFNLMFETKIGPYGDQKGYLRPETAQG 169
Query: 250 IFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHA 309
IFVNFKRL F +LPF QIG A+RNEISPR G++R+REFT AE E F +P++ H
Sbjct: 170 IFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAEAEIFFNPSETEHP 229
Query: 310 KFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGI 369
F +V+ ++ LY +Q+ +T EAV+ + N Y+M +++ ++ +GI
Sbjct: 230 HFDEVKNEKLR-LYPIEHQLKNLGEIELTAEEAVKKGYIMNTFFAYYMVMVKRVLLDIGI 288
Query: 370 DPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKATGVRLS 428
+K+RFRQ + E AHY+ D WDAE + +GWVECVG A+R YDL++H + +G L+
Sbjct: 289 PEDKIRFRQQLPEERAHYSRDTWDAEVHSERFGWVECVGIANRGDYDLSRHMRESGADLT 348
Query: 429 AEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYE 488
H EP+ + +E LN +G + +KDAK I + + + + + E L GK
Sbjct: 349 VLIHYDEPKIVKRLEVSLNLKRVGPKLRKDAKRINELIKSWNEEKKRELVEILGKEGKIT 408
Query: 489 LLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQ 548
+ + + L KD I++ + E+I+P V+EPSFGI R Y L E++ + +E
Sbjct: 409 I----EGYELEKDDFIIREVEEKITGEKIVPHVLEPSFGIDRPFYLLLENSLVI---EED 461
Query: 549 RTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYART 608
RTYL L +AP++ ++LPL + + + +L + G V D +IG+RY R
Sbjct: 462 RTYLKLKKDMAPIEVAVLPLVAKEPLKSIAYEIFRKLQKAGF-IVVYDEKDTIGRRYLRY 520
Query: 609 DEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
DEI P+ +TID T E +VT+R+RD+ QVRV + E+ S +++L
Sbjct: 521 DEIGTPYCVTIDNQT-PEDSTVTIRDRDTREQVRVSIEELPSKLREL 566
>sp|Q5JID8|SYG_PYRKO Glycine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=glyS PE=3 SV=1
Length = 570
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/587 (37%), Positives = 332/587 (56%), Gaps = 32/587 (5%)
Query: 70 MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSIL 129
++DL++RR F SF IYGG G YD+GP+G +K + R+ F E E++ +
Sbjct: 11 LQDLMRRRGFAWGSFEIYGGSRGFYDYGPLGATIKRKIERKIREAF-QREGFFELETPDI 69
Query: 130 TLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIV 189
T E V ASGHV++F D +V+ K G FR DHL++ L
Sbjct: 70 TPEKVFIASGHVEKFVDPLVECKKCGARFRADHLVEEALG-------------------- 109
Query: 190 IKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQG 249
I +GMS + ++++++I+ P +LS+ FNLMF T+IGP G KGYLRPETAQG
Sbjct: 110 IDTEGMSAEHLTQLIREHDIRCPECGGELSDVWYFNLMFETRIGPYGDQKGYLRPETAQG 169
Query: 250 IFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHA 309
IFVNF+RL F +LPF QIG A+RNEISPR G++R+REFT AE E F +P + H
Sbjct: 170 IFVNFRRLNAFARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAEAEIFFNPNETEHP 229
Query: 310 KFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGI 369
F +V+ ++ LY +Q+ +T EAV+ + N Y+M +++ ++ +GI
Sbjct: 230 HFDEVKDEKLR-LYPIEHQLKNLSMIELTAEEAVKKGYIMNTFFAYYMVMVKRVLLDIGI 288
Query: 370 DPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKATGVRLS 428
+K+RFRQ + E AHY+ D WDAE + +GWVECVG A+R YDL++H + +G L+
Sbjct: 289 PEDKIRFRQQLPEERAHYSRDTWDAEIHSERFGWVECVGIANRGDYDLSRHMRESGADLT 348
Query: 429 AEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYE 488
H EP+ + +E LN +G + KKDAK I + + + E L GK
Sbjct: 349 VLIHYDEPKIVKKLEVSLNMKRVGPKLKKDAKRINELIKGWGEEKKRELVELLEKEGK-- 406
Query: 489 LLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQ 548
V + + L KD I++ + E+I+P V+EPSFGI R Y L E++ + +E
Sbjct: 407 --VTIEGYELEKDDFIIREVEEKITGEKIVPHVLEPSFGIDRPFYLLLENSLVI---EED 461
Query: 549 RTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYART 608
RTYL + +AP++ ++LPL + + + L + G V D ++G+RY R
Sbjct: 462 RTYLRIKKDMAPIEVAVLPLVAKEPLKSIAYDIFRTLQKEGF-IAVYDEKDTVGRRYMRY 520
Query: 609 DEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
DEI P+ +T+D T E +VT+R+RD+ Q+RVK+ E+ +++L
Sbjct: 521 DEIGTPYCVTVDNQT-PEDGTVTIRDRDTREQIRVKIEELPKKLREL 566
>sp|C6A317|SYG_THESM Glycine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=glyS PE=3 SV=1
Length = 570
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 332/587 (56%), Gaps = 31/587 (5%)
Query: 70 MEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSIL 129
++DL++RR F SF IYGG G YD+GP+G +K + R+ F+ E E++ +
Sbjct: 11 LQDLMRRRGFVWSSFEIYGGARGFYDYGPLGAIIKRKIEKKIREAFI-REGFFEIETPDI 69
Query: 130 TLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIV 189
T E V ASGHVD+F D + + K G FR DH+++ L
Sbjct: 70 TPEEVFIASGHVDKFVDPLTECKKCGSRFRADHIVEEVLG-------------------- 109
Query: 190 IKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPETAQG 249
I +G+S + ++++++IK P +L++ FNLMF T IGP KGYLRPETAQG
Sbjct: 110 IDTEGLSAEHLTQLIREHDIKCPECGGELADVWYFNLMFETYIGPYKDKKGYLRPETAQG 169
Query: 250 IFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHA 309
IFVNFKRL F +LPF QIG A+RNEISPR G++R+REF+ AE+E F DP K H
Sbjct: 170 IFVNFKRLNNFARNQLPFGVFQIGKAYRNEISPRQGMLRLREFSQAEVEIFFDPKQKEHP 229
Query: 310 KFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGI 369
F +V+ +++ Y NQ+ +T+ EAV+ V N Y+MA +++ ++ +GI
Sbjct: 230 HFEEVK-DEVLRFYPIENQLKNLGMIELTLDEAVKKGYVMNTFFAYYMAMVKRILLDIGI 288
Query: 370 DPEKLRFRQHMGNEMAHYACDCWDAECLTS-YGWVECVGCADRSAYDLTQHFKATGVRLS 428
K+RFRQ + E AHY+ D WD E + +GW+ECVG A R YDL++H K +G L+
Sbjct: 289 PANKIRFRQQLPEERAHYSSDTWDVEIHSERFGWIECVGIAYRGNYDLSRHVKESGADLT 348
Query: 429 AEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESLNTNGKYE 488
H EP+ + ++ LN +G + K DAK I L + + + E L GK
Sbjct: 349 VMIHYKEPKIIKKLKISLNMKRVGPKLKGDAKRINQKLQEMTQEELKKIFEGLEKIGK-- 406
Query: 489 LLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDEQ 548
+ +D E L K+ IK+ + H E+++P V+EPSFGI R Y L E++ M ++
Sbjct: 407 VFLDGYE--LEKEDFIIKEVEEKVHGEKLVPHVLEPSFGIDRPFYLLLENSIVM--DEDS 462
Query: 549 RTYLALPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYART 608
R YL + +AP++ ++LPL + + L + G V D ++G+RYAR
Sbjct: 463 RVYLKIKKDMAPIEVAVLPLVAKEPLTSIAYEIFRTLQKEGF-IVVYDEKDTVGRRYARY 521
Query: 609 DEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDL 655
DEI P+ +TID T E ++VT+R+RD+ Q+RVK+ E+ +++L
Sbjct: 522 DEIGTPYCVTIDNQT-PEDNTVTIRDRDTREQIRVKIEELPEKLREL 567
>sp|Q9FXG2|SYGC_ARATH Putative glycine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana
GN=At1g29870 PE=2 SV=2
Length = 463
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/394 (48%), Positives = 247/394 (62%), Gaps = 2/394 (0%)
Query: 74 LKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLEVDCSILTLEP 133
L R F +SF IY G++G YDFGP G ++ N+LS WR+ FV EE M+EV C+ LT E
Sbjct: 68 LDRLLFVHKSFDIYHGVAGLYDFGPHGRTVELNILSLWRKCFVDEEDMMEVACTALTPEA 127
Query: 134 VLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIKLD 193
V ASGHV +F DLMVKD G R DHL+K++ E +P E ++ ++
Sbjct: 128 VFNASGHVKKFTDLMVKDEVDGAFHRADHLVKSYCENRKKDPTISAENAAELDKVIAHVE 187
Query: 194 GMSKNEMDDVLKKYNIKSPLTKNDLSEP-MEFNLMFATQIGPSGLIKGYLRPETAQGIFV 252
+S E+ V + +P+TKN LS P FNLMF T G SG + GYLRPETAQG F
Sbjct: 188 DLSAEELGGVWNHCST-APVTKNPLSHPPRPFNLMFQTSFGASGSLIGYLRPETAQGSFC 246
Query: 253 NFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHAKFS 312
NFK N +LPFA AQ+G FRNEISPR GL+R REFT+AEIEHF P KSH+KFS
Sbjct: 247 NFKDYYNLNGRKLPFAVAQVGRVFRNEISPRQGLLRTREFTLAEIEHFVHPEHKSHSKFS 306
Query: 313 DVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGIDPE 372
DV ++++ + G+ A+R+ +GEAV V +ETLG+F+ R+ F+I +GID E
Sbjct: 307 DVAKLELLMFPREEQEKPGQFAKRLCLGEAVAKGHVNSETLGFFIGRVYLFLIRLGIDKE 366
Query: 373 KLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLSAEKH 432
+LRFR H+ NEMAHYA DCWDAE SYGW+ECVG ADRS YDL H + +G L A++
Sbjct: 367 RLRFRHHLANEMAHYATDCWDAEIECSYGWIECVGIADRSDYDLRAHSEKSGHALVAQEK 426
Query: 433 LPEPQTREIVEPVLNKGIIGKEFKKDAKTICDAL 466
L EP E + +G FK + K + +AL
Sbjct: 427 LAEPIEVEKLAITPEMKELGPAFKGNQKNVVEAL 460
>sp|Q9YBF8|SYG_AERPE Glycine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=glyS PE=3 SV=1
Length = 583
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/609 (34%), Positives = 337/609 (55%), Gaps = 47/609 (7%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVL--EEQMLEVDC 126
K+ ++ KRR F+ S+ IYGG++G YD+GP+G LK ++ WR++FVL ++ ++E++
Sbjct: 8 KLVEIGKRRGFFWPSYEIYGGVAGFYDWGPLGHLLKRRIIEKWRRYFVLMHQDHVVEIET 67
Query: 127 SILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECA 186
++ E V ASGHV+ F D +V+ G FR DHL++ L
Sbjct: 68 PVIGPEKVYIASGHVEHFTDPIVRCTSCGRTFRADHLVEEALG----------------- 110
Query: 187 DIVIKLDGMSKNEMDDVLKKYNIKSPLTKNDLSEPMEFNLMFATQIGPSGLIKGYLRPET 246
I +G+S +E+D ++++ ++ P+ + +L FNL+F TQIGP GYLRPE
Sbjct: 111 ---INAEGLSVSELDRIIRERGLRCPVCQGELGRVETFNLLFRTQIGPYEGSVGYLRPEL 167
Query: 247 AQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDK 306
AQGIFV FKR+ E R+P AQ+G RNEISPR L+R+REFT+ E+E+F DP D+
Sbjct: 168 AQGIFVAFKRVYEAMRSRIPLGIAQVGRVGRNEISPRQALVRLREFTIMEMEYFIDPEDQ 227
Query: 307 --SHAKFSDVETTQMMVL-YSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKF 363
S F + +++ +L Y A + + KP E + EAV +V + LGY+MA +F
Sbjct: 228 WGSCPFFHRMADSKLPILTYEAKRRGEEKP-ESFKLEEAVNEGVVISPCLGYWMAVGMRF 286
Query: 364 MISVGIDPEKLRFRQHMGNEMAHYACDCWDAEC-LTSYGWVECVGCADRSAYDLTQHFKA 422
+ +G+ + + F + E AHY+ +D ++ +GW+E G + R YDL++H K
Sbjct: 287 VEDLGVPSDSIMFEEKGPEERAHYSSQTFDQLVKVSRWGWIEVAGHSYRGDYDLSRHMKY 346
Query: 423 TGVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAAL---DLNSVSAVEE 479
+G L+A K P+P + V++K IG+ K AKT+ + L + +L ++A
Sbjct: 347 SGQDLTAFKPYPKPIVVKKRRVVVDKAAIGRALKSRAKTVLEELGRMGEGELERLAASNR 406
Query: 480 SLNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALFEHN 539
++ EL V ++ +S ++ +P V+EPSFG R +Y E+
Sbjct: 407 AVVAG--VELPPGSLRIVEVEEKVSGRR---------FVPHVVEPSFGTDRNVYVALEYA 455
Query: 540 FKMRDGDEQRTYLALPPLVAPLKASILPLSSNPE-FQPFIKMLSSELSQNGISFKVDDSG 598
++ +G R LA P +AP++A +LPL N E +M+ L + G + DDS
Sbjct: 456 YREVEG---RVVLAFPRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAGFTVYYDDS- 511
Query: 599 GSIGKRYARTDEIAIPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKDLSLA 658
GSIG+RYAR DEI +P +TID+ TL E +VTLR+RD+ QVR+ +EV ++
Sbjct: 512 GSIGRRYARADEIGVPAAVTIDYQTL-EDGTVTLRDRDTWRQVRIGADEVVDKLRRFIYD 570
Query: 659 KITWEDVQS 667
ED+ +
Sbjct: 571 GARLEDLGT 579
>sp|Q7UEU9|SYG_RHOBA Glycine--tRNA ligase OS=Rhodopirellula baltica (strain SH1)
GN=glyQS PE=3 SV=2
Length = 536
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 178/629 (28%), Positives = 266/629 (42%), Gaps = 154/629 (24%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEE------------- 119
L KRR F QS IYGG+ G +D+GP+G LK N+ AW +
Sbjct: 7 LCKRRGFLFQSSEIYGGVQGFWDYGPLGVELKRNLKDAWWHDMISGHNELVSPAGAPSTF 66
Query: 120 QMLEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQ 179
+M+ +DC+I+ V K SGH D F D MV ++ + +R D + +E +
Sbjct: 67 EMVGLDCTIIMHPQVWKCSGHYDLFHDHMVDCRESKKRYRFDQVRGRFVEYQGTKIFVST 126
Query: 180 SVKEECADIVIKLDGMS------KN-----------EMDDVLKKYNIKSPLTK--NDLSE 220
+ E + ++ GM KN +D + N+ +P K L+E
Sbjct: 127 LAEIEQEEDEVRRRGMKFFKLRPKNADELTVEKESLTLDKLDSTDNVLAPDAKTLGTLTE 186
Query: 221 PMEFNLMFATQIGPSGLIKG--YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRN 278
P EFNLMF T +G G + +LRPETAQGIFVNFK +++ + R+PF Q+G +FRN
Sbjct: 187 PREFNLMFKTTLGALGGEEDTTFLRPETAQGIFVNFKNVVDSSRVRIPFGIGQVGKSFRN 246
Query: 279 EISPRSGLIRVREFTMAEIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERIT 338
EI+PR+ R REF EIE FC P NQ
Sbjct: 247 EITPRNFTFRSREFEQMEIEFFCHP-----------------------NQ---------- 273
Query: 339 IGEAVRSNLVANETLGYFMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAEC-- 396
+ E Y+ R + +G+ E L R+H E+AHY+ D E
Sbjct: 274 ----------SQEWYRYWRDRRMAWYTKLGLSNESLIMREHHTEELAHYSVGTADIEYAF 323
Query: 397 --LTSYGWVECVGCADRSAYDLTQHFKATGVRLSAEKHLPEPQTREIVEPVLNKGIIGKE 454
L + E G A R +DL H + ++P N +
Sbjct: 324 PFLPEGEYGELEGIAHRGDFDLRSHMEGK------------------LDPATNPMTV--- 362
Query: 455 FKKDAKTICDALAALDLNSVSAVEESLNTNGKYELLVDDKEFVLTKDMISIKKSTKTFHV 514
LN +GK + K+ D+ +
Sbjct: 363 -------------------------ELNEHGKPKHRGSGKDLAYRDDITN---------- 387
Query: 515 EEIIPSVIEPSFGIGRIMYALF----------EHNFKMRDGDEQRTYLALPPLVAPLKAS 564
E+ +P VIEPS G R A + N KM + RT + L P +AP+KA+
Sbjct: 388 EKFVPHVIEPSAGADRAALAFLCEAYTEDEAPDENGKM----QTRTVMKLDPRLAPIKAA 443
Query: 565 ILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTL 624
+ PL + + L ++ F D+ G++G+RY R DE P+ IT+D D+L
Sbjct: 444 VFPLVKKDGMPEVAQEIYGALKEHYNVFY--DAKGAVGRRYRRQDEAGTPYCITVDGDSL 501
Query: 625 KEPHSVTLRERDSMTQVRVKVNEVASVIK 653
+ +VT+R+RD++ Q RVK+++V S I+
Sbjct: 502 TD-KTVTIRDRDTLEQTRVKIDDVVSEIQ 529
>sp|A5N4L2|SYG_CLOK5 Glycine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=glyQS PE=3 SV=1
Length = 463
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 188/385 (48%), Gaps = 69/385 (17%)
Query: 60 PFVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEE 119
PF + D K+ L K R F IYGG++ +D+GP+G LK N+ AW Q FV E
Sbjct: 2 PFEKTMD--KIVALAKNRGFVYPGSDIYGGLANTWDYGPIGVELKNNVKKAWWQKFVHES 59
Query: 120 QM-LEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTP 178
Q + +DC+IL V ASGHV F+D ++ + FR D L++ H+ T
Sbjct: 60 QYNVGIDCAILMNNEVWVASGHVGNFSDPLMDCKECKSRFRADKLVEEHM--------TS 111
Query: 179 QSVKEECADIVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGL 237
+ V++ AD G + ++ + + NI P K + ++ +FNLMF T G +
Sbjct: 112 KGVEKASAD------GWNNEKLKEYIDDNNIVCPDCGKTNFTDIRQFNLMFKTFQGVTED 165
Query: 238 IKG--YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMA 295
K YLRPETAQGIFVNFK + + ++PF AQIG AFRNEI+P + R REF
Sbjct: 166 SKAEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKAFRNEITPGNFTFRTREFEQM 225
Query: 296 EIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGY 355
E+E FC+P +D+E Y
Sbjct: 226 ELEFFCEPG-------TDLEWHN------------------------------------Y 242
Query: 356 FMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYD 415
+ KF++ +GI E +RFR H E++HY+ D E L +GW E G ADR+ YD
Sbjct: 243 WKEYCWKFLLKLGIKEENIRFRVHEKEELSHYSNATSDIEYLFPFGWGELWGIADRTDYD 302
Query: 416 LTQHFKATGVRL------SAEKHLP 434
LTQH +G + + E+++P
Sbjct: 303 LTQHQNRSGKDMTYLNPVTNERYIP 327
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 500 KDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPL 557
KDM + T E IP IEPS G R + A ++ + +G + RT + P
Sbjct: 312 KDMTYLNPVTN----ERYIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDVRTVMHFHPA 367
Query: 558 VAPLKASILPLSSNPEFQPF--IKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIP 614
+AP K +ILPLS + ML + F VD D GSIGKRY R DEI P
Sbjct: 368 IAPFKVAILPLSKKLSEKALDVYNMLRKD-------FNVDYDDAGSIGKRYRREDEIGTP 420
Query: 615 FGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
+ ITIDFDT+ + +VT+R+RD+M Q RVK++E+ IK+
Sbjct: 421 YCITIDFDTM-DNDTVTIRDRDTMKQFRVKIDELKDFIKE 459
>sp|B9DY74|SYG_CLOK1 Glycine--tRNA ligase OS=Clostridium kluyveri (strain NBRC 12016)
GN=glyQS PE=3 SV=1
Length = 463
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 188/385 (48%), Gaps = 69/385 (17%)
Query: 60 PFVSSFDRAKMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEE 119
PF + D K+ L K R F IYGG++ +D+GP+G LK N+ AW Q FV E
Sbjct: 2 PFEKTMD--KIVALAKNRGFVYPGSDIYGGLANTWDYGPIGVELKNNVKKAWWQKFVHES 59
Query: 120 QM-LEVDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTP 178
Q + +DC+IL V ASGHV F+D ++ + FR D L++ H+ T
Sbjct: 60 QYNVGIDCAILMNNEVWVASGHVGNFSDPLMDCKECKSRFRADKLVEEHM--------TS 111
Query: 179 QSVKEECADIVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGL 237
+ V++ AD G + ++ + + NI P K + ++ +FNLMF T G +
Sbjct: 112 KGVEKASAD------GWNNEKLKEYIDDNNIVCPDCGKTNFTDIRQFNLMFKTFQGVTED 165
Query: 238 IKG--YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMA 295
K YLRPETAQGIFVNFK + + ++PF AQIG AFRNEI+P + R REF
Sbjct: 166 SKAEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKAFRNEITPGNFTFRTREFEQM 225
Query: 296 EIEHFCDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGY 355
E+E FC+P +D+E Y
Sbjct: 226 ELEFFCEPG-------TDLEWHN------------------------------------Y 242
Query: 356 FMARIQKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYD 415
+ KF++ +GI E +RFR H E++HY+ D E L +GW E G ADR+ YD
Sbjct: 243 WKEYCWKFLLKLGIKEENIRFRVHEKEELSHYSNATSDIEYLFPFGWGELWGIADRTDYD 302
Query: 416 LTQHFKATGVRL------SAEKHLP 434
LTQH +G + + E+++P
Sbjct: 303 LTQHQNRSGKDMTYLNPVTNERYIP 327
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 500 KDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPL 557
KDM + T E IP IEPS G R + A ++ + +G + RT + P
Sbjct: 312 KDMTYLNPVTN----ERYIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDVRTVMHFHPA 367
Query: 558 VAPLKASILPLSSNPEFQPF--IKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIP 614
+AP K +ILPLS + ML + F VD D GSIGKRY R DEI P
Sbjct: 368 IAPFKVAILPLSKKLSEKALDVYNMLRKD-------FNVDYDDAGSIGKRYRREDEIGTP 420
Query: 615 FGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIKD 654
+ ITIDFDT+ + +VT+R+RD+M Q RVK++E+ IK+
Sbjct: 421 YCITIDFDTM-DNDTVTIRDRDTMKQFRVKIDELKDFIKE 459
>sp|P56206|SYG_THET8 Glycine--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=glyQS PE=1 SV=3
Length = 506
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 169/354 (47%), Gaps = 48/354 (13%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE-VDCSILTL 131
L KRR F QS IYGG+ G YD+GP+G LK N+ AW + V E +E +D S+LT
Sbjct: 12 LCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTH 71
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
VL SGH FAD MV + T + +RLDHL+K E++ V+EE +++
Sbjct: 72 RLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQ 131
Query: 192 LDGMSKNEMDDVLKKYNIKSPLT--KNDLSEPMEFNLMFATQIGP--SGLIKGYLRPETA 247
+ + + P + D + P FN+MF T +GP YLRPETA
Sbjct: 132 AMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVGPVEDEASLAYLRPETA 191
Query: 248 QGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKS 307
QGIFVNFK +L+ S +LPF AQIG AFRNEI+PR+ + RVREF EIE+F P +
Sbjct: 192 QGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDE 251
Query: 308 HAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISV 367
+ VE ER+ K+ +
Sbjct: 252 YWHRYWVE-------------------ERL------------------------KWWQEM 268
Query: 368 GIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFK 421
G+ E L Q E+AHYA D +G E G A+R+ +DL H K
Sbjct: 269 GLSRENLVPYQQPPEELAHYAKATVDILYRFPHGLEELEGIANRTDFDLGSHTK 322
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 517 IIPSVIEPSFGIGRIMYALFEHNFKMRD--GDEQRTYLALPPLVAPLKASILPLSSN-PE 573
+P VIEPS G+ R + AL F + E+R L L P +AP+K +++PL N PE
Sbjct: 354 FVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPE 413
Query: 574 FQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPH----- 628
+ K L + L G+ + + G+IGK Y R DE+ PF +T+D+DT+ +
Sbjct: 414 ITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTR 473
Query: 629 ---SVTLRERDSMTQVRVKVNEVASVIKD 654
+VT+R+RD+M Q+R+ V+E+ +++
Sbjct: 474 LKDTVTVRDRDTMEQIRLHVDELEGFLRE 502
>sp|Q1IXM3|SYG_DEIGD Glycine--tRNA ligase OS=Deinococcus geothermalis (strain DSM 11300)
GN=glyQS PE=3 SV=1
Length = 504
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 224/475 (47%), Gaps = 64/475 (13%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE-VDCSILTL 131
L KRR F Q IYGG+ G +D+GP+G LK N+ ++W + V E +E +D +I+
Sbjct: 12 LCKRRGFIFQGSEIYGGLQGFWDYGPLGVELKNNIKASWWRANVYERDDMEGLDAAIIMH 71
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
VL+ SGH F+D MV + KT + +RLDHL+K + A+ + + E +
Sbjct: 72 RLVLRHSGHEATFSDPMVDNRKTKKRYRLDHLVKDQKPDVVAQ--VAEGIGESVENFAAV 129
Query: 192 LDGMSKN--EMDDVLKKYNIKSPLTK--NDLSEPMEFNLMFATQIGPSGLIK--GYLRPE 245
+ + + + +VL ++ P + D +EP FN+MF T IGP GYLRPE
Sbjct: 130 VAALVAHPAKAAEVLVAAGVRDPFSGEVGDWTEPRPFNMMFKTSIGPVADEDSFGYLRPE 189
Query: 246 TAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDP-T 304
TAQGIF NFK +++ S RLPF AQIG AFRNEI+PR+ + RVRE EIE FC P T
Sbjct: 190 TAQGIFTNFKNVVDSTSRRLPFGIAQIGKAFRNEITPRNFIFRVRELEQMEIEFFCTPGT 249
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
D++ + + A + G P E+I I + V E L ++ R M
Sbjct: 250 DEAWHQ-------HWLEARLAWWEAQGIPREKIQILD------VPKEDLAHYSKRTYDLM 296
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKAT- 423
+ + G+ E G A+R+ +DL H KA
Sbjct: 297 YN------------------------------YPTLGYEEIEGIANRTDFDLGSHTKAQA 326
Query: 424 --GVRLSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDALAALDLNSVSAVEESL 481
G++ E++ I P NK ++ + A LA L + + +E+L
Sbjct: 327 ELGIQARVEENFDSVAKLTIPHPETNKPVVPFVIEPSAGVDRAMLAVL---AEAYTKETL 383
Query: 482 NTNGKYELLVDDKEFVLTKDMISI---KKSTKTFHVEEIIPSVIEPSFGIGRIMY 533
NG +++ K + + I + + V + I + ++ S G+GR++Y
Sbjct: 384 E-NGSERIVLKLKPHLAPIKVAVIPLARNREEITSVAKAIKAKLQ-SLGLGRVLY 436
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 90/147 (61%), Gaps = 11/147 (7%)
Query: 517 IIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN-P 572
++P VIEPS G+ R M A+ + + +G E R L L P +AP+K +++PL+ N
Sbjct: 355 VVPFVIEPSAGVDRAMLAVLAEAYTKETLENGSE-RIVLKLKPHLAPIKVAVIPLARNRE 413
Query: 573 EFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTL---KEP-- 627
E K + ++L G+ + + G+IGK Y R DE+ P+ +T+DF+T+ ++P
Sbjct: 414 EITSVAKAIKAKLQSLGLGRVLYEDSGNIGKAYRRHDEVGTPYCVTVDFETVGKGEDPAL 473
Query: 628 -HSVTLRERDSMTQVRVKVNEVASVIK 653
+VT+R+RD++ Q RV+++E+A+ ++
Sbjct: 474 TDTVTVRDRDTLGQERVRISELANWLQ 500
>sp|B9L0I4|SYG_THERP Glycine--tRNA ligase OS=Thermomicrobium roseum (strain ATCC 27502 /
DSM 5159 / P-2) GN=glyQS PE=3 SV=1
Length = 468
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 197/414 (47%), Gaps = 87/414 (21%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFV-LEEQMLEVDCSILTL 131
L KRR F IYGG++ +DFGP+G LK N+ +AW ++F+ E M+ +D IL
Sbjct: 17 LAKRRGFVYPGSEIYGGLANTWDFGPLGAELKRNLKNAWWEYFIQRREDMVGLDGGILLH 76
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
V +ASGHV+ F D ++ + FR D LI+ L +
Sbjct: 77 PRVWEASGHVEEFNDPLIDCRRCKSRFRADTLIEERLHR--------------------S 116
Query: 192 LDGMSKNEMDDVLKKYNIKSPLTK-NDLSEPMEFNLMFATQIGP--SGLIKGYLRPETAQ 248
+G+S +EM ++++ N+ P+ D + +FNLMF T IGP + YLRPETAQ
Sbjct: 117 TEGLSLDEMTRLVQEANLACPVCGVRDWTPVRKFNLMFRTFIGPVETESTPVYLRPETAQ 176
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
IFVNFK +++ + ++PF QIG AFRNEI+P + + R+ EF EIE+F P
Sbjct: 177 AIFVNFKNVVQTSRVKIPFGIGQIGKAFRNEITPGNFIFRLLEFEQMEIEYFIRPE---- 232
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
+ E +++ + +F+ +G
Sbjct: 233 ---------------------------------------MWEEYFDHWLNEMGQFLRWIG 253
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
P++LR R+H E++HY+ D E +GW E G A R+ YDL +H + +G L+
Sbjct: 254 FKPDRLRTREHGPQELSHYSRKTVDFEYFFPFGWKELCGLAYRTDYDLRRHQEYSGEDLT 313
Query: 429 A------EKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDAL---AALDLNS 473
E+++P ++EP + + + F +CDA A+D+N
Sbjct: 314 YFDQERNERYIP-----HVIEPTMG---VERLF---LALLCDAYDEEPAVDVNG 356
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 515 EEIIPSVIEPSFGIGRIMYALF------EHNFKMRDGDEQRTYLALPPLVAPLKASILPL 568
E IP VIEP+ G+ R+ AL E + R L P VAP K ++LPL
Sbjct: 321 ERYIPHVIEPTMGVERLFLALLCDAYDEEPAVDVNGNPYTRVVLRFHPRVAPYKVAVLPL 380
Query: 569 SSNPEFQPFIKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKEP 627
PE + ++ EL Q F+++ D SIG+RY R DEI P+ +TID+ TL E
Sbjct: 381 LRKPELVTVAREVAQELRQ---YFRIEYDETQSIGRRYRRQDEIGTPYCVTIDYQTL-ED 436
Query: 628 HSVTLRERDSMTQVRVKVNEVASVIK 653
+VT+R+RD+M QVRV ++ + I+
Sbjct: 437 RTVTIRDRDTMQQVRVPISGLVEEIE 462
>sp|Q72L85|SYG_THET2 Glycine--tRNA ligase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=glyQS PE=3 SV=1
Length = 506
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 168/354 (47%), Gaps = 48/354 (13%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE-VDCSILTL 131
L KRR F QS IYGG+ G YD+GP+G LK N+ AW + V E +E +D S+LT
Sbjct: 12 LCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTH 71
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
VL SGH FAD MV + T + +RLDHL+K E++ V+E +++
Sbjct: 72 RLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEGNLHALVQ 131
Query: 192 LDGMSKNEMDDVLKKYNIKSPLT--KNDLSEPMEFNLMFATQIGP--SGLIKGYLRPETA 247
+ + + P + D + P FN+MF T +GP YLRPETA
Sbjct: 132 AMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVGPVEDEAALAYLRPETA 191
Query: 248 QGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKS 307
QGIFVNFK +L+ S +LPF AQIG AFRNEI+PR+ + RVREF EIE+F P +
Sbjct: 192 QGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDE 251
Query: 308 HAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISV 367
+ VE ER+ K+ +
Sbjct: 252 YWHRYWVE-------------------ERL------------------------KWWQEM 268
Query: 368 GIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFK 421
G+ E L + E+AHYA D +G E G A+R+ +DL H K
Sbjct: 269 GLSRENLVPYEQPPEELAHYAKATVDILYRFPHGLEELEGIANRTDFDLGSHTK 322
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 517 IIPSVIEPSFGIGRIMYALFEHNFKMRD--GDEQRTYLALPPLVAPLKASILPLSSN-PE 573
+P VIEPS G+ R + AL F + E+R L L P +AP+K +++PL N PE
Sbjct: 354 FVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPE 413
Query: 574 FQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPH----- 628
+ K L + L G+ + + G+IGK Y R DE+ PF +T+D+DT+ +
Sbjct: 414 ITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTR 473
Query: 629 ---SVTLRERDSMTQVRVKVNEVASVIKD 654
+VT+R+RD+M Q+R+ V+E+ +++
Sbjct: 474 LKDTVTVRDRDTMEQIRLHVDELEGFLRE 502
>sp|Q97EB8|SYG_CLOAB Glycine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=glyQS
PE=3 SV=1
Length = 462
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 185/401 (46%), Gaps = 72/401 (17%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCS 127
K+ L K R F IYGG++ +D+GP+G LK N+ W + FV + + +DC+
Sbjct: 9 KIVSLAKNRGFVFAGSEIYGGLANSWDYGPLGVELKNNVKKLWWKKFVQDNTYNVGLDCA 68
Query: 128 ILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECAD 187
IL V ASGH+ F+D ++ + FR D +++ +L + AE
Sbjct: 69 ILMNSEVWVASGHLGGFSDPLMDCKECKSRFRADKIVEDYLTEQGAE------------- 115
Query: 188 IVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRP 244
V DG S ++++ +K +IK P K + + +FNLMF T G + YLRP
Sbjct: 116 -VASADGWSNEKLENFIKDKHIKCPKCGKENFTSIRKFNLMFKTFQGVTEDASSEIYLRP 174
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQGIFVNFK + + ++PF QIG AFRNEI+P + R REF E+E FC P
Sbjct: 175 ETAQGIFVNFKNVQRSSRKKVPFGIGQIGKAFRNEITPGNFTFRTREFEQMELEFFCKPG 234
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
+D+E + Y+ F+
Sbjct: 235 -------TDLEWFK------------------------------------YWKDYCWSFL 251
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
+ +GI+ E LRFR H E+ Y+ D E +GW E G ADR+ YDL +H +G
Sbjct: 252 LDLGINKENLRFRDHSAEELVFYSKATSDIEYKFPFGWGELWGVADRTDYDLKKHMDHSG 311
Query: 425 VRL------SAEKHLPEPQTREIVEPVLNKGIIGKEFKKDA 459
+ + EK++P ++EP L + F DA
Sbjct: 312 EDMNYLDPSTNEKYVP-----YVIEPSLGADRVALAFLIDA 347
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 500 KDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPL 557
+DM + ST E+ +P VIEPS G R+ A ++ + +G +QR L P
Sbjct: 312 EDMNYLDPSTN----EKYVPYVIEPSLGADRVALAFLIDAYDEEELEGGDQRIVLHFHPQ 367
Query: 558 VAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGI 617
+AP+KA++LPLS + + + S S+ I + D GSIGKRY R DEI P+ I
Sbjct: 368 IAPIKAAVLPLSKKLS-EKALDVYSKISSKFNIEY---DETGSIGKRYRRQDEIGTPYCI 423
Query: 618 TIDFDTLKEPHSVTLRERDSMTQVRVKV 645
T+DFDTL E +VT+R+RDSM+QVRVK+
Sbjct: 424 TVDFDTL-EDEAVTIRDRDSMSQVRVKI 450
>sp|A4ITQ8|SYG_GEOTN Glycine--tRNA ligase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=glyQS PE=3 SV=1
Length = 466
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 193/404 (47%), Gaps = 74/404 (18%)
Query: 68 AKMEDLL---KRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEE-QMLE 123
A ME+++ K R F IYGG++ +D+GP+G LK N+ AW + FV E +
Sbjct: 9 ATMEEIVAHAKHRGFVFPGSEIYGGLANTWDYGPLGVELKNNIKRAWWKKFVQESPHNVG 68
Query: 124 VDCSILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKE 183
+D +IL +ASGH+ F D MV + R D LI+ Q+++E
Sbjct: 69 LDAAILMNPKTWEASGHLGNFNDPMVDCKQCKARHRADKLIE-------------QALEE 115
Query: 184 ECADIVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIG--PSGLIKG 240
+ ++V+ DG+ +M++++++Y+I P D + +FNLMF T G S +
Sbjct: 116 KGIEMVV--DGLPLAKMEELIREYDIACPECGSRDFTNVRQFNLMFKTYQGVTESSANEI 173
Query: 241 YLRPETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHF 300
YLRPETAQGIFVNFK + +LPF AQIG +FRNEI+P + R REF E+E F
Sbjct: 174 YLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFF 233
Query: 301 CDPTDKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARI 360
C P GE ++ Y+
Sbjct: 234 CKP------------------------------------GEELK-------WFDYWKQFC 250
Query: 361 QKFMISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHF 420
+++++S+G++ E +R R H E++HY+ D E +GW E G A R+ YDL QH
Sbjct: 251 KEWLLSLGMNEEHIRLRDHTKEELSHYSNATTDIEYQFPFGWGELWGIASRTDYDLKQHM 310
Query: 421 KATGVRLSAEKHLPEPQTRE-----IVEPVLNKGIIGKEFKKDA 459
+ +G + H + +T E +EP L + F DA
Sbjct: 311 EHSG----EDFHYLDQETNERYIPYCIEPSLGADRVTLAFMIDA 350
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 505 IKKSTKTFHV------EEIIPSVIEPSFGIGRIMYALFEHNF---KMRDGDEQRTYLALP 555
++ S + FH E IP IEPS G R+ A + ++ DG RT + L
Sbjct: 310 MEHSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMIDAYDEEELEDGT-TRTVMHLH 368
Query: 556 PLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIP 614
P +AP KA++LPLS + + + EL+++ F VD D GSIGKRY R DEI P
Sbjct: 369 PALAPYKAAVLPLSK--KLGDGARRIYEELAKH---FMVDYDETGSIGKRYRRQDEIGTP 423
Query: 615 FGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVI 652
F IT DF++ ++ VT+R+RD+M QVR+ + E+ + +
Sbjct: 424 FCITYDFES-EQDGQVTVRDRDTMEQVRLPIGELKAFL 460
>sp|C4ZAV7|SYG_EUBR3 Glycine--tRNA ligase OS=Eubacterium rectale (strain ATCC 33656 /
VPI 0990) GN=glyQS PE=3 SV=1
Length = 465
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 185/381 (48%), Gaps = 72/381 (18%)
Query: 76 RRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTLEPV 134
R F Y S IYGG++ +D+G +G LK N+ AW + F+ E + VDC+IL
Sbjct: 15 RGFVYPGS-EIYGGLANTWDYGNLGVELKNNVKRAWWKKFIQENPYNVGVDCAILMNPQT 73
Query: 135 LKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIKLDG 194
ASGH+ F+D ++ + E FR D +I+ + E +T +DG
Sbjct: 74 WVASGHLGGFSDPLMDCKECHERFRADKIIEDFAQDNGIELET-------------SVDG 120
Query: 195 MSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRPETAQGIF 251
+ +M D +K++N+ P K++ ++ +FNLMF T G + K YLRPETAQGIF
Sbjct: 121 WTNEQMVDFIKEHNVPCPSCGKHNFTDIRQFNLMFKTFQGVTEDAKNTVYLRPETAQGIF 180
Query: 252 VNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSHAKF 311
VNFK + + ++PF Q+G +FRNEI+P + R REF E+E FC+P
Sbjct: 181 VNFKNVQRTSRKKIPFGIGQVGKSFRNEITPGNFTFRTREFEQMELEFFCEPG------- 233
Query: 312 SDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVGIDP 371
+D+ E Y+ + ++IS+GI
Sbjct: 234 TDL------------------------------------EWFKYWRGFCRDWLISLGIKE 257
Query: 372 EKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS--- 428
+++R R H E+A Y+ D E L +GW E G ADR+ YDL +H + +G L+
Sbjct: 258 DEMRLRDHDPAELAFYSKGTTDIEFLFPFGWGELWGIADRTDYDLGRHQEVSGQDLTYFD 317
Query: 429 ---AEKHLPEPQTREIVEPVL 446
EK+LP ++EP L
Sbjct: 318 DQKNEKYLP-----YVIEPSL 333
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 515 EEIIPSVIEPSFGIGRIMYALF-----EHNFKMRDGDEQRTYLALPPLVAPLKASILPLS 569
E+ +P VIEPS G R++ A E + + + RT P +AP+K +LPLS
Sbjct: 322 EKYLPYVIEPSLGADRVVLAFLCAAYDEEDIGTPEKPDVRTVFHFHPALAPVKIGVLPLS 381
Query: 570 SNPEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHS 629
+ + + ++LS+ + + DD G +IGKRY R DEI PF +T DFD+ +E H
Sbjct: 382 K--KLNESAEKVFAQLSKT-YNCEYDDRG-TIGKRYRRQDEIGTPFCVTYDFDS-EEDHC 436
Query: 630 VTLRERDSMTQVRVKVNEV 648
VT+R+RD+M Q R+ ++E+
Sbjct: 437 VTVRDRDTMEQERIAIDEL 455
>sp|Q8RB46|SYG_THETN Glycine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=glyQS PE=3
SV=1
Length = 461
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 180/376 (47%), Gaps = 68/376 (18%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCS 127
K+ L K R F IYGG++ +D+GP+G +K N+ W + F+ E + +D +
Sbjct: 9 KIVALAKNRGFVFPGSEIYGGLANTWDYGPLGVEMKNNIKRIWWKKFIQESPYNVGIDSA 68
Query: 128 ILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECAD 187
IL V ASGHV F+D ++ + FR D LI+ + +KE+ D
Sbjct: 69 ILMNREVWVASGHVASFSDPLMDCKECKSRFRADQLIEDY-------------IKEKGLD 115
Query: 188 IVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRP 244
I I +G + +M + +K++ + P ++ +E +FNLMF T +G + K +LRP
Sbjct: 116 ISI--EGWTNEQMMEFIKEHKVPCPKCGAHNFTEIRKFNLMFKTYVGVTEDSKSEVFLRP 173
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQGIFVNFK + + ++PF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 174 ETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC--- 230
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
KP E + E Y+ ++
Sbjct: 231 ---------------------------KPGEDM-------------EWFNYWRQFCMDWL 250
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
+ G+ E LRFR H E++HY+ D E +GW E G A+R+ YDL QH + +G
Sbjct: 251 VEFGLKRENLRFRDHKKEELSHYSTATTDIEYNFPFGWGELWGIANRTDYDLRQHMEHSG 310
Query: 425 VRL------SAEKHLP 434
+ + EK++P
Sbjct: 311 EDMTYTDPVTGEKYIP 326
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFKMRDGD-EQRTYLALPPLVAPLKASILPLSSNPE 573
E+ IP IEPS G+ R+M A + + + E R L L P +AP+K ++ PLS
Sbjct: 322 EKYIPYCIEPSVGVDRLMLAFLVDAYDEEEVEGETRVVLRLHPAIAPVKVAVFPLS---- 377
Query: 574 FQPFIKMLSSELSQNGISFKVD-----DSGGSIGKRYARTDEIAIPFGITIDFDTLKEPH 628
K L+ + + K D GSIG+RY R DEI PF +T DFD+ + H
Sbjct: 378 -----KKLNEAAYKIYLDLKKKFPAEYDESGSIGRRYRRQDEIGTPFCVTYDFDS-ENDH 431
Query: 629 SVTLRERDSMTQVRVKVNEVASVIKD 654
VT+R+RD+M Q+R+ +++V +++
Sbjct: 432 KVTIRDRDTMEQIRIDIDQVDKYLEE 457
>sp|B9DNL1|SYG_STACT Glycine--tRNA ligase OS=Staphylococcus carnosus (strain TM300)
GN=glyQS PE=3 SV=1
Length = 463
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 187/400 (46%), Gaps = 71/400 (17%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTL 131
L K R F IYGG+S +D+GP+G LK N+ AW + F+ + + +D +IL
Sbjct: 11 LAKHRGFVFPGSEIYGGLSNTWDYGPLGVELKNNIKQAWWKKFISQSPYNVGLDAAILMN 70
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
+ASGH+ F D M+ + + +R D LI+ +++ E D
Sbjct: 71 PRTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQN-------------EKGDENFI 117
Query: 192 LDGMSKNEMDDVLKKYNIKSPLT-KNDLSEPMEFNLMFATQIGPS--GLIKGYLRPETAQ 248
DG+S +EM ++ + IK P++ ++ ++ +FNLMF T G + + +LRPETAQ
Sbjct: 118 ADGLSFDEMKRIIDEEGIKDPVSGTSNWTDIRQFNLMFKTFQGVTEDSTNEIFLRPETAQ 177
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIFVN+K + +LPF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC------- 230
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
KP E I E Y+ +K+++ +G
Sbjct: 231 -----------------------KPGEEI-------------EWQNYWKTFAEKWLLDLG 254
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
I + +R R H +E++HY+ D E +GW E G A R+ YDL QH + +G
Sbjct: 255 IKNDSIRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLKQHSEFSGDDFK 314
Query: 429 AEKHLPEPQTREI---VEPVLNKGIIGKEFKKDAKTICDA 465
H PE + I +EP L + F +CDA
Sbjct: 315 Y--HDPETNEKYIPYCIEPSLGADRVTLAF------LCDA 346
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 85/145 (58%), Gaps = 12/145 (8%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFKMRDGDE----QRTYLALPPLVAPLKASILPLSS 570
E+ IP IEPS G R+ A + R+G E +RT L P +AP KA++LPLS
Sbjct: 322 EKYIPYCIEPSLGADRVTLAFLCDAYD-REGVEGSKDERTVLHFHPAIAPYKAAVLPLSK 380
Query: 571 NPEFQPFIKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHS 629
+ IK+ +LS+N F VD D SIGKRY R DEI P+ IT DFD+L E
Sbjct: 381 KLS-EEAIKVYE-QLSEN---FTVDFDESQSIGKRYRRQDEIGTPYCITFDFDSL-EDQQ 434
Query: 630 VTLRERDSMTQVRVKVNEVASVIKD 654
VT+R+RDSM QVR+ ++E+ I +
Sbjct: 435 VTVRDRDSMEQVRMPISELNDFISE 459
>sp|Q9RSR5|SYG_DEIRA Glycine--tRNA ligase OS=Deinococcus radiodurans (strain ATCC 13939
/ DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=glyQS PE=3 SV=2
Length = 506
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 188/394 (47%), Gaps = 66/394 (16%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQMLE-VDCSILTL 131
L KRR F Q IYGG+ G YD+GP+G LK N+ +AW + V E +E +D SI+
Sbjct: 12 LCKRRGFIFQGSEIYGGLQGFYDYGPLGVELKNNIKAAWWRSNVYERDDMEGLDASIIMH 71
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
VL+ SGH F+D M+ + K + +RLDHL+K +K + K + + E +
Sbjct: 72 RMVLRHSGHEATFSDPMIDNKKNNKRYRLDHLLKD--QKADVQAKVAEIMGESADNFAAL 129
Query: 192 LDGMSKN--EMDDVLKKYNIKSPLTK--NDLSEPMEFNLMFATQIGPSGLIK--GYLRPE 245
+ ++ + K+ ++ P + + ++P FN+MF T IGP + GYLRPE
Sbjct: 130 VAALNAKPAQASAAFKEAGVRDPFSGEVGEWTDPKPFNMMFRTTIGPVADEESYGYLRPE 189
Query: 246 TAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDP-T 304
TAQGIF NFK +++ S RLPF AQIG AFRNEI+PR+ + RVRE EIE F P T
Sbjct: 190 TAQGIFTNFKNVVDSTSRRLPFGIAQIGKAFRNEITPRNFIFRVRELEQMEIEFFVTPGT 249
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
D+ E +++ + K+
Sbjct: 250 DE--------------------------------------------EWHEHWLEKRLKWW 265
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAEC-LTSYGWVECVGCADRSAYDLTQHFKAT 423
G+ EK+ ++AHY+ +D + G E G A+RS YDL H K+
Sbjct: 266 EDQGVPREKIEILDVPKEDLAHYSKRTYDLMYDYPTLGHEEIEGIANRSDYDLGSHTKSQ 325
Query: 424 ---GVRLSAEKH--------LPEPQTREIVEPVL 446
G+ E++ +P P+T + V P +
Sbjct: 326 SELGLVAKVEENNDSIAKLTIPHPETNKPVVPFV 359
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 17/151 (11%)
Query: 517 IIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN-P 572
++P VIEPS G+ R M A+ F + +G+E R L L P +AP+K +++PL+ N
Sbjct: 355 VVPFVIEPSAGVDRAMLAVLSEAFTKETLENGNE-RIVLKLKPHLAPIKVAVIPLARNRE 413
Query: 573 EFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDT--------- 623
E K + +EL G+ + + G+IGK Y R DE+ P+ +T+DFDT
Sbjct: 414 EITDVAKAIKAELQGLGLGRVLYEDSGNIGKAYRRHDEVGTPYCVTVDFDTVGLGENTDE 473
Query: 624 -LKEPHSVTLRERDSMTQVRVKVNEVASVIK 653
LK+ +VT+R+RD++ Q RVK++E+A I+
Sbjct: 474 SLKD--TVTVRDRDTLAQERVKISELAGWIQ 502
>sp|Q8XHL9|SYG_CLOPE Glycine--tRNA ligase OS=Clostridium perfringens (strain 13 / Type
A) GN=glyQS PE=3 SV=1
Length = 467
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 181/388 (46%), Gaps = 72/388 (18%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCS 127
K+ L K R F IYGG++ +D+GP+G K N+ AW + FV E + + +D +
Sbjct: 9 KIVALCKNRGFIFPGSEIYGGLANSWDYGPLGVEFKNNVKRAWWKKFVQESKYNVGLDSA 68
Query: 128 ILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECAD 187
IL V ASGHV F+D ++ + FR D L++ H+ AE T
Sbjct: 69 ILMNREVWVASGHVGGFSDPLMDCKECKARFRADKLVEDHMTANGAEVATA--------- 119
Query: 188 IVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRP 244
DG S E+ D + K NI P K + ++ +FNLMF T G + K YLRP
Sbjct: 120 -----DGWSNEELMDYITKNNIVCPKCGKLNYTDIRKFNLMFKTFQGITEDSKNEVYLRP 174
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQGIFVNFK + ++PF AQIG +FRNEI+P + R REF E+E FC P
Sbjct: 175 ETAQGIFVNFKSVQRTTRKKVPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPG 234
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
+D+ E ++ F+
Sbjct: 235 -------TDL------------------------------------EWFNFWKDSCWNFL 251
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
+++G+ E +R R H E++ Y+ D E L +GW E G ADR+ YDL +H + +G
Sbjct: 252 LNLGMKEENIRMRDHGEEELSFYSNATSDIEYLFPFGWGELWGIADRTDYDLNKHAEHSG 311
Query: 425 VRL------SAEKHLPEPQTREIVEPVL 446
+ + EK++P ++EP L
Sbjct: 312 QDMTYLDPTTNEKYVP-----YVIEPSL 334
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 17/161 (10%)
Query: 500 KDMISIKKSTKTFHVEEIIPSVIEPSFGIGRIMYALF-----EHNFKMRDGD-EQRTYLA 553
+DM + +T E+ +P VIEPS G R+ A E + +G + RT +
Sbjct: 312 QDMTYLDPTTN----EKYVPYVIEPSLGADRVALAFLVEAYDEEELEGANGKVDVRTVMH 367
Query: 554 LPPLVAPLKASILPLSSNPEFQPFIKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIA 612
L P +AP KA+ILPLS + + +ELS++ F VD D GSIGKRY R DEI
Sbjct: 368 LHPALAPFKAAILPLSK--KLSEKADEVYAELSKH---FNVDYDETGSIGKRYRRQDEIG 422
Query: 613 IPFGITIDFDTLKEPHSVTLRERDSMTQVRVKVNEVASVIK 653
PF IT+DFDTL E VT+R+RD+M Q RVK+ +V ++I+
Sbjct: 423 TPFCITVDFDTL-EDGCVTVRDRDNMEQQRVKIEDVRAIIE 462
>sp|Q8CSD5|SYG_STAES Glycine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=glyQS PE=3 SV=1
Length = 463
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 184/402 (45%), Gaps = 71/402 (17%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTL 131
L K R F IYGG+S +D+GP+G LK N+ AW Q F+ + + +D +IL
Sbjct: 11 LAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNIKKAWWQKFITQSPYNVGIDAAILMN 70
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
+ASGH+ F D M+ + + +R D LI+ +++ E D
Sbjct: 71 PKTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQN-------------EKGDENFI 117
Query: 192 LDGMSKNEMDDVLKKYNIKSPLTKN-DLSEPMEFNLMFATQIGPS--GLIKGYLRPETAQ 248
DG+S +EM ++ I P++K + ++ +FNLMF T G + + +LRPETAQ
Sbjct: 118 ADGLSFDEMKKIIDDEGIVCPVSKTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQ 177
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIFVN+K + +LPF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC------- 230
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
KP E I E Y+ +++ +
Sbjct: 231 -----------------------KPGEEI-------------EWQNYWKTFASEWLTDLN 254
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
I + +R R H +E++HY+ D E +GW E G A R+ YDL QH + +G
Sbjct: 255 ISEDNMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLRQHSEHSGEDF- 313
Query: 429 AEKHLPEPQTREI---VEPVLNKGIIGKEFKKDAKTICDALA 467
+ H PE + I +EP L + F +CDA A
Sbjct: 314 -KYHDPETNEKYIPYCIEPSLGADRVTLAF------LCDAYA 348
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 18/146 (12%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN 571
E+ IP IEPS G R+ A + + + RT + P +AP KA++LPLS
Sbjct: 322 EKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHPALAPYKAAVLPLS-- 379
Query: 572 PEFQPFIKMLSSE----LSQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKE 626
K LSSE Q SF +D D SIGKRY R DEI P+ IT DFD+L E
Sbjct: 380 -------KKLSSEAIKIFEQLSSSFAIDFDESQSIGKRYRRQDEIGTPYCITFDFDSL-E 431
Query: 627 PHSVTLRERDSMTQVRVKVNEVASVI 652
+ VT+R+RDSM QVR+ ++E+ + +
Sbjct: 432 DNQVTVRDRDSMEQVRMPISELETFL 457
>sp|Q5HNY2|SYG_STAEQ Glycine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=glyQS PE=3 SV=1
Length = 463
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 184/402 (45%), Gaps = 71/402 (17%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTL 131
L K R F IYGG+S +D+GP+G LK N+ AW Q F+ + + +D +IL
Sbjct: 11 LAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNIKKAWWQKFITQSPYNVGIDAAILMN 70
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
+ASGH+ F D M+ + + +R D LI+ +++ E D
Sbjct: 71 PKTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQN-------------EKGDENFI 117
Query: 192 LDGMSKNEMDDVLKKYNIKSPLTKN-DLSEPMEFNLMFATQIGPS--GLIKGYLRPETAQ 248
DG+S +EM ++ I P++K + ++ +FNLMF T G + + +LRPETAQ
Sbjct: 118 ADGLSFDEMKKIIDDEGIVCPVSKTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQ 177
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIFVN+K + +LPF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC------- 230
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
KP E I E Y+ +++ +
Sbjct: 231 -----------------------KPGEEI-------------EWQNYWKTFASEWLTDLN 254
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
I + +R R H +E++HY+ D E +GW E G A R+ YDL QH + +G
Sbjct: 255 ISEDNMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLRQHSEHSGEDF- 313
Query: 429 AEKHLPEPQTREI---VEPVLNKGIIGKEFKKDAKTICDALA 467
+ H PE + I +EP L + F +CDA A
Sbjct: 314 -KYHDPETNEKYIPYCIEPSLGADRVTLAF------LCDAYA 348
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 18/146 (12%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN 571
E+ IP IEPS G R+ A + + + RT + P +AP KA++LPLS
Sbjct: 322 EKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHPALAPYKAAVLPLS-- 379
Query: 572 PEFQPFIKMLSSE----LSQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKE 626
K LSSE Q SF +D D SIGKRY R DEI P+ IT DFD+L E
Sbjct: 380 -------KKLSSEAIKIFEQLSSSFAIDFDESQSIGKRYRRQDEIGTPYCITFDFDSL-E 431
Query: 627 PHSVTLRERDSMTQVRVKVNEVASVI 652
+ VT+R+RDSM QVR+ ++E+ + +
Sbjct: 432 DNQVTVRDRDSMEQVRMPISELETFL 457
>sp|A6LPL6|SYG_CLOB8 Glycine--tRNA ligase OS=Clostridium beijerinckii (strain ATCC 51743
/ NCIMB 8052) GN=glyQS PE=3 SV=1
Length = 463
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 184/388 (47%), Gaps = 72/388 (18%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCS 127
K+ L K R F IYGG++ +D+GP+G K N+ AW + FV E + +D +
Sbjct: 9 KIVALCKNRGFVFPGSDIYGGLANSWDYGPLGVEFKNNVKKAWWKKFVQESPYNVGLDSA 68
Query: 128 ILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECAD 187
IL V ASGHV F+D ++ + FR D L++ H+ + AE T
Sbjct: 69 ILMNREVWVASGHVGGFSDPLMDCKECKARFRADKLVEDHMTENGAEVATA--------- 119
Query: 188 IVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRP 244
DG + ++ + +++ NI P K + ++ +FNLMF T G + K YLRP
Sbjct: 120 -----DGWTNEQLKEYIERNNIVCPKCGKMNYTDIRKFNLMFKTFQGVTEDAKSEMYLRP 174
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQGIFVNFK + + ++PF AQIG +FRNEI+P + R REF E+E FC P
Sbjct: 175 ETAQGIFVNFKAVQRTSRKKVPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPG 234
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
+D+E + Y+ F+
Sbjct: 235 -------TDLEWHK------------------------------------YWKDYCWNFL 251
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
+++ + E LR R H E++ Y+ D E L +GW E G ADR+ YDL++H + +G
Sbjct: 252 LNLNVKAENLRMRDHGEEELSFYSNATSDIEYLFPFGWGELWGIADRTDYDLSKHQEHSG 311
Query: 425 VRLS------AEKHLPEPQTREIVEPVL 446
LS EK++P ++EP L
Sbjct: 312 QDLSYLDQTTNEKYVP-----YVIEPSL 334
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 9/142 (6%)
Query: 515 EEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPLVAPLKASILPLSSNP 572
E+ +P VIEPS G R+ A ++ + +G + RT + L P +AP KA+ILPLS
Sbjct: 323 EKYVPYVIEPSLGADRVALAFLIEAYDEEELEGGDVRTVMHLHPALAPFKAAILPLSKKL 382
Query: 573 EFQPFIKMLSSELSQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSVT 631
+ + +ELS+ F +D D GSIGKRY R DEI P+ ITIDFDTL E SVT
Sbjct: 383 SEKSLD--IYAELSK---KFNLDFDETGSIGKRYRRQDEIGTPYCITIDFDTL-EDESVT 436
Query: 632 LRERDSMTQVRVKVNEVASVIK 653
+R RD+M Q R+K++E+ + I+
Sbjct: 437 IRNRDTMEQERIKISEIENYIQ 458
>sp|B1HTI6|SYG_LYSSC Glycine--tRNA ligase OS=Lysinibacillus sphaericus (strain C3-41)
GN=glyQS PE=3 SV=1
Length = 461
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 187/404 (46%), Gaps = 81/404 (20%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLE-EQMLEVDCSILTL 131
L K R F IYGG++ +D+GP+G LK N+ AW Q FV E E + +D +IL
Sbjct: 12 LAKHRGFVFPGSEIYGGLANTWDYGPLGVELKNNIKKAWWQKFVQESEHNVGIDAAILMN 71
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIK-AHLEKLAAEPKTPQSVKEECADIVI 190
ASGHV F D M+ R D +I+ A L K D +I
Sbjct: 72 PKAWVASGHVGNFNDPMIDCKSCKARHRADKIIEDAALAK---------------GDEII 116
Query: 191 KLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIG--PSGLIKGYLRPETA 247
+DGM+ ++M + + KY++ P K D ++ +FNLMF T G S + +LRPETA
Sbjct: 117 -VDGMTFDQMKETMIKYDVVCPDCGKADFTDIRQFNLMFKTFQGVTESSTNEIFLRPETA 175
Query: 248 QGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKS 307
QGIFVNFK + R PF AQIG +FRNEI+P + R REF E+E FC
Sbjct: 176 QGIFVNFKNVQRSMRKRTPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFC------ 229
Query: 308 HAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISV 367
KP E + E Y+ + +++++
Sbjct: 230 ------------------------KPGEDL-------------EWHSYWKEFCKNWLLNL 252
Query: 368 GIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVR- 426
G+ + +R R H +E++HY+ D E +GW E G ADR+ YDL QH + +G
Sbjct: 253 GMKEDSMRLRDHEDDELSHYSNATTDIEFKFPFGWGELWGIADRTDYDLKQHMEHSGEDF 312
Query: 427 -----LSAEKHLPEPQTREIVEPVLNKGIIGKEFKKDAKTICDA 465
+S ++++P +EP L + F +CDA
Sbjct: 313 TYIDPVSNDRYIP-----YCIEPSLGADRVTLAF------LCDA 345
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 515 EEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPLVAPLKASILPLSSNP 572
+ IP IEPS G R+ A ++ + +GD++RT L P +AP KA++LPLS
Sbjct: 321 DRYIPYCIEPSLGADRVTLAFLCDAYDEEELEGDDKRTVLRFHPAIAPFKAAVLPLS--- 377
Query: 573 EFQPFIKMLSSELSQNGI----SFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKEP 627
K LS E + +F VD D SIGKRY R DEI PF IT DFD+ KE
Sbjct: 378 ------KKLSDEATDVWAELRKAFPVDFDESQSIGKRYRRQDEIGTPFCITYDFDS-KED 430
Query: 628 HSVTLRERDSMTQVRVKVNEVASVIK 653
VT+R RDSMTQ R+ ++EV + I+
Sbjct: 431 GQVTVRHRDSMTQERMPISEVKAYIE 456
>sp|Q2YT14|SYG_STAAB Glycine--tRNA ligase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=glyQS PE=3 SV=1
Length = 463
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 189/416 (45%), Gaps = 77/416 (18%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTL 131
L K R F IYGG+S +D+GP+G LK N+ AW Q F+ + + +D +IL
Sbjct: 11 LAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFNIGIDAAILMN 70
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
V +ASGH++ F D M+ + + +R D LI+ ++ Q VK D
Sbjct: 71 PKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYM----------QDVK---GDENFI 117
Query: 192 LDGMSKNEMDDVLKKYNIKSPLTKN-DLSEPMEFNLMFATQIGPS--GLIKGYLRPETAQ 248
DG+S +M ++ I P++K + +E +FNLMF T G + + +LRPETAQ
Sbjct: 118 ADGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQ 177
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIFVN+K + +LPF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC------- 230
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
KP E I E Y+ ++ S+
Sbjct: 231 -----------------------KPGEEI-------------EWQNYWKTFASDWLTSLN 254
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
+ E +R R H +E++HY+ D E +GW E G A R+ +DL +H + +G
Sbjct: 255 MSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFR 314
Query: 429 AEKHLPEPQTREI---VEPVLNKGII------------GKEFKKDAKTICDALAAL 469
H PE + I +EP L + G E KDA+T+ AL
Sbjct: 315 Y--HDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPAL 368
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN 571
E+ IP IEPS G R+ A + + + RT L P +AP KA+ILPLS
Sbjct: 322 EKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKK 381
Query: 572 PEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSVT 631
+ IK+ S+ I F D SIGKRY R DEI P+ +T DFD+L E + VT
Sbjct: 382 LSGEA-IKIFEQLSSKFSIDF---DESQSIGKRYRRQDEIGTPYCVTFDFDSL-EDNQVT 436
Query: 632 LRERDSMTQVRVKVNEVASVI 652
+R+RDSM QVR+ ++E+ + +
Sbjct: 437 VRDRDSMEQVRMPISELEAFL 457
>sp|Q899G6|SYG_CLOTE Glycine--tRNA ligase OS=Clostridium tetani (strain Massachusetts /
E88) GN=glyQS PE=3 SV=1
Length = 463
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 186/401 (46%), Gaps = 72/401 (17%)
Query: 69 KMEDLLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCS 127
K+ L K R F IYGG++ +D+GP+G K N+ AW + FV E + +D +
Sbjct: 9 KIVALAKNRGFIFPGSEIYGGLANSWDYGPLGVEFKNNVKKAWWKKFVQESPYNVGIDAA 68
Query: 128 ILTLEPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECAD 187
IL V ASGHV F+D ++ + R D LI+ +++ K+E +
Sbjct: 69 ILMNREVWVASGHVGGFSDPLMDCKECKARCRADKLIEDYMQD-----------KDENFE 117
Query: 188 IVIKLDGMSKNEMDDVLKKYNIKSP-LTKNDLSEPMEFNLMFATQIGPSGLIKG--YLRP 244
DG S ++ D + K NI P +++ ++ +FNLMF T G + + +LRP
Sbjct: 118 ---SADGWSNEQLKDFIDKNNIACPKCGEHNFTDVRKFNLMFKTFQGVTEDAQSEIFLRP 174
Query: 245 ETAQGIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPT 304
ETAQGIFVNFK + ++PF AQIG +FRNEI+P + R REF E+E FC P
Sbjct: 175 ETAQGIFVNFKNAIRTTRRKMPFGMAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPG 234
Query: 305 DKSHAKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFM 364
+D+E + YS F+
Sbjct: 235 -------TDLEWFEYWRDYS------------------------------------WNFL 251
Query: 365 ISVGIDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATG 424
+S+G+ + LR R+H E+A Y+ D E L +GW E G ADR+ YDL QH +G
Sbjct: 252 LSLGLAKDNLRIREHAKEELAFYSKATVDIEYLFPFGWGELWGIADRTDYDLKQHMNHSG 311
Query: 425 VRL------SAEKHLPEPQTREIVEPVLNKGIIGKEFKKDA 459
L + EK+LP +EP L + F DA
Sbjct: 312 KDLTYLDPETNEKYLP-----YCIEPSLGADRVALAFLVDA 347
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 87/144 (60%), Gaps = 11/144 (7%)
Query: 515 EEIIPSVIEPSFGIGRIMYALF--EHNFKMRDGDEQRTYLALPPLVAPLKASILPLSSNP 572
E+ +P IEPS G R+ A ++ + DG + RT L L P +AP KA+ILPL+
Sbjct: 323 EKYLPYCIEPSLGADRVALAFLVDAYDEEELDGGDSRTVLRLHPALAPFKAAILPLTKK- 381
Query: 573 EFQPFIKMLSSEL-SQNGISFKVD-DSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSV 630
+K S E+ S F VD D G+IGKRY R DEI P+ ITID+DTL E ++V
Sbjct: 382 -----LKDKSLEVYSMLSKYFNVDYDEAGTIGKRYRREDEIGTPYCITIDYDTL-EDNTV 435
Query: 631 TLRERDSMTQVRVKVNEVASVIKD 654
T+R+RDSM Q+R+ ++E+ I +
Sbjct: 436 TIRDRDSMDQIRINIDELVKYISE 459
>sp|P67035|SYG_STAAW Glycine--tRNA ligase OS=Staphylococcus aureus (strain MW2) GN=glyQS
PE=3 SV=1
Length = 463
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 189/416 (45%), Gaps = 77/416 (18%)
Query: 73 LLKRRFFYDQSFSIYGGISGQYDFGPMGCALKTNMLSAWRQFFVLEEQM-LEVDCSILTL 131
L K R F IYGG+S +D+GP+G LK N+ AW Q F+ + + +D +IL
Sbjct: 11 LAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFNVGIDAAILMN 70
Query: 132 EPVLKASGHVDRFADLMVKDLKTGECFRLDHLIKAHLEKLAAEPKTPQSVKEECADIVIK 191
V +ASGH++ F D M+ + + +R D LI+ ++ Q VK D
Sbjct: 71 PKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYM----------QDVK---GDENFI 117
Query: 192 LDGMSKNEMDDVLKKYNIKSPLTKN-DLSEPMEFNLMFATQIGPS--GLIKGYLRPETAQ 248
DG+S +M ++ I P++K + +E +FNLMF T G + + +LRPETAQ
Sbjct: 118 ADGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQ 177
Query: 249 GIFVNFKRLLEFNSGRLPFAAAQIGNAFRNEISPRSGLIRVREFTMAEIEHFCDPTDKSH 308
GIFVN+K + +LPF QIG +FRNEI+P + + R REF E+E FC
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFC------- 230
Query: 309 AKFSDVETTQMMVLYSACNQMDGKPAERITIGEAVRSNLVANETLGYFMARIQKFMISVG 368
KP E I E Y+ ++ S+
Sbjct: 231 -----------------------KPGEEI-------------EWQNYWKTFASDWLTSLN 254
Query: 369 IDPEKLRFRQHMGNEMAHYACDCWDAECLTSYGWVECVGCADRSAYDLTQHFKATGVRLS 428
+ E +R R H +E++HY+ D E +GW E G A R+ +DL +H + +G
Sbjct: 255 MSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFR 314
Query: 429 AEKHLPEPQTREI---VEPVLNKGII------------GKEFKKDAKTICDALAAL 469
H PE + I +EP L + G E KDA+T+ AL
Sbjct: 315 Y--HDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPAL 368
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 515 EEIIPSVIEPSFGIGRIMYALFEHNFK---MRDGDEQRTYLALPPLVAPLKASILPLSSN 571
E+ IP IEPS G R+ A + + + RT L P +AP KA+ILPLS
Sbjct: 322 EKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKK 381
Query: 572 PEFQPFIKMLSSELSQNGISFKVDDSGGSIGKRYARTDEIAIPFGITIDFDTLKEPHSVT 631
+ IK+ S+ I F D SIGKRY R DEI P+ +T DFD+L E + VT
Sbjct: 382 LSGEA-IKIFEQLSSKFSIDF---DESQSIGKRYRRQDEIGTPYCVTFDFDSL-EDNQVT 436
Query: 632 LRERDSMTQVRVKVNEVASVI 652
+R+RDSM QVR+ ++E+ + +
Sbjct: 437 VRDRDSMEQVRMPISELEAFL 457
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,042,821
Number of Sequences: 539616
Number of extensions: 10350873
Number of successful extensions: 30428
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 28502
Number of HSP's gapped (non-prelim): 1629
length of query: 679
length of database: 191,569,459
effective HSP length: 124
effective length of query: 555
effective length of database: 124,657,075
effective search space: 69184676625
effective search space used: 69184676625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)