BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17945
(214 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 106 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 165
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS
Sbjct: 166 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 220
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP P ++
Sbjct: 160 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 205
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/118 (81%), Positives = 103/118 (87%), Gaps = 8/118 (6%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV----LDKPLAKLGEIPVA 114
KIMLPWD+TGKTGPKKPLPDNV V EPK+E+ P PSS++ +D PLA IPVA
Sbjct: 187 KIMLPWDATGKTGPKKPLPDNVAVAEPKDEILPLYPSSEIKPIKVDAPLA----IPVA 240
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD+TGKTGPKKPLPDNV V EPK+E+ P +P ++
Sbjct: 181 VLGIKVKIMLPWDATGKTGPKKPLPDNVAVAEPKDEILPLYPSSEI 226
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/118 (81%), Positives = 103/118 (87%), Gaps = 8/118 (6%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV----LDKPLAKLGEIPVA 114
KIMLPWD +GKTGPKKPLPDNV+V+EPKEE+ P PSS++ D PLA IPVA
Sbjct: 187 KIMLPWDPSGKTGPKKPLPDNVSVVEPKEEILPLFPSSEIKPVKSDAPLA----IPVA 240
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD +GKTGPKKPLPDNV+V+EPKEE+ P FP ++
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEEILPLFPSSEI 226
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 94/104 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVN ATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNVATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKP 104
KIMLPWD TGK GPKKPLPDNV+V EPKEE+ P P+S + KP
Sbjct: 188 KIMLPWDQTGKLGPKKPLPDNVSVAEPKEEILPIAPTSDIKSKP 231
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI--PVAS 115
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP +LGE+ PVAS
Sbjct: 187 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPTLELGEVVEPVAS 243
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ +
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSE 225
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 140 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 199
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI--PVAS 115
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP +LGE+ PVAS
Sbjct: 200 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPTLELGEVVEPVAS 256
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ +
Sbjct: 194 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSE 238
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 96/100 (96%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D TGK GPKKPLPDNV+V+EPK+EV PT+PSS++
Sbjct: 187 KIMLPYDPTGKIGPKKPLPDNVSVVEPKDEVVPTVPSSEI 226
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLP+D TGK GPKKPLPDNV+V+EPK+EV P P ++
Sbjct: 181 VLGIKVKIMLPYDPTGKIGPKKPLPDNVSVVEPKDEVVPTVPSSEI 226
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD +GKTGPKKPLPDNV+V+EPKEE+ P PSS++
Sbjct: 187 KIMLPWDPSGKTGPKKPLPDNVSVVEPKEEILPAYPSSEI 226
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD +GKTGPKKPLPDNV+V+EPKEE+ PA+P ++
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEEILPAYPSSEI 226
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/117 (78%), Positives = 103/117 (88%), Gaps = 2/117 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI--PVAS 115
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP +L E+ PVAS
Sbjct: 187 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPTMELAEVVEPVAS 243
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ +
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSE 225
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 43 MECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 102
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD TGKTGPK+PLPDNV+V+EPKEE+ P PSS++
Sbjct: 103 KIMLPWDPTGKTGPKRPLPDNVSVVEPKEEILPKAPSSEI 142
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD TGKTGPK+PLPDNV+V+EPKEE+ P P ++
Sbjct: 97 VLGIKVKIMLPWDPTGKTGPKRPLPDNVSVVEPKEEILPKAPSSEI 142
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/117 (78%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 40 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 99
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI--PVAS 115
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP +LGE+ PVA+
Sbjct: 100 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPTLELGEVVEPVAT 156
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ +
Sbjct: 94 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSE 138
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 92/100 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPK+PLPDNV+V+EPKEE+ P P S V
Sbjct: 187 KIMLPWDPNGKIGPKRPLPDNVSVVEPKEEIIPPFPQSDV 226
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKT 165
VLGIKVKIMLPWD GK GPK+PLPDNV+V+EPKEE+ P FPQ + K+
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKRPLPDNVSVVEPKEEIIPPFPQSDVKMKS 230
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 94/100 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GKTGPK+PLPDNV+V+EPK+E P +PSS +
Sbjct: 187 KIMLPWDPNGKTGPKRPLPDNVSVVEPKDEPLPLVPSSDI 226
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD GKTGPK+PLPDNV+V+EPK+E P P +
Sbjct: 181 VLGIKVKIMLPWDPNGKTGPKRPLPDNVSVVEPKDEPLPLVPSSDI 226
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 101/116 (87%), Gaps = 4/116 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 162 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 221
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKL----GEIP 112
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KPL + GEIP
Sbjct: 222 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPLEPVDLVGGEIP 277
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ +
Sbjct: 216 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSE 260
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 94/99 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D GK GPKKPLPDNV+V++PKEE PT+PSS+
Sbjct: 187 KIMLPFDPAGKQGPKKPLPDNVSVVDPKEEPLPTMPSSE 225
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP--QKKLP 162
VLGIKVKIMLP+D GK GPKKPLPDNV+V++PKEE P P + K+P
Sbjct: 181 VLGIKVKIMLPFDPAGKQGPKKPLPDNVSVVDPKEEPLPTMPSSESKVP 229
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLA 106
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP A
Sbjct: 187 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSA 232
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASLYLA 171
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ + K ++L L
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSALELG 236
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 42 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 101
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLA 106
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP A
Sbjct: 102 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSA 147
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASLYLA 171
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ + K ++L L
Sbjct: 96 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSALELG 151
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 94/100 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK+GPKKPLPD V+++EPKEEV P++P S+V
Sbjct: 189 KIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVPISEV 228
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK+GPKKPLPD V+++EPKEEV P+ P
Sbjct: 183 VLGIKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVP 224
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 94/100 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK+GPKKPLPD V+++EPKEEV P++P S+V
Sbjct: 189 KIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVPISEV 228
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK+GPKKPLPD V+++EPKEEV P+ P
Sbjct: 183 VLGIKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVP 224
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 94/100 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK+GPKKPLPD V+++EPKEEV P++P S+V
Sbjct: 189 KIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVPISEV 228
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK+GPKKPLPD V+++EPKEEV P+ P
Sbjct: 183 VLGIKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEVPPSVP 224
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 94/100 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 144 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 203
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK+GPKKPLPD V+++EPKEE+ P++P S+V
Sbjct: 204 KIMLPWDPNGKSGPKKPLPDYVSIVEPKEEIPPSVPMSEV 243
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD GK+GPKKPLPD V+++EPKEE+ P+ P ++
Sbjct: 198 VLGIKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEIPPSVPMSEV 243
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 92/99 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+
Sbjct: 187 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSSPRSE 225
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKT 165
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ + FK
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSSPRSEPKFKV 230
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 91/100 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P DYV+TATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GKTGPKKPLPDNV+V EPKEE P +PSS +
Sbjct: 190 KIMLPWDQNGKTGPKKPLPDNVSVAEPKEENIPLMPSSDI 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 35/42 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GKTGPKKPLPDNV+V EPKEE P P
Sbjct: 184 VLGIKVKIMLPWDQNGKTGPKKPLPDNVSVAEPKEENIPLMP 225
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 96/116 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIMLPWD GK GPKKP PD++ V EPK+E PT P+S V L PVA+V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEPTSDVRSIAPTALPPPPVATV 243
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEP 223
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D GKTGPKKPLPD+V+++EPK+E+ P+ P+S+V
Sbjct: 189 KIMLPYDPQGKTGPKKPLPDSVSIVEPKDEIFPSQPTSEV 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+E+ P+ P
Sbjct: 183 VLGIKVKIMLPYDPQGKTGPKKPLPDSVSIVEPKDEIFPSQP 224
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P+S+V
Sbjct: 189 KIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEV 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P
Sbjct: 183 VLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQP 224
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 90/100 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E PT P+S V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEPTSDV 227
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEP 223
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQ AKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 98 MESGAKGCEVVVSGKLRGQCAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 157
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLA 106
KIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P S+ +KP A
Sbjct: 158 KIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSA 203
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASLYLA 171
VLGIKVKIMLPWD GK GPKKPLPDNV+V+EPK+E+ + P+ + K ++L L
Sbjct: 152 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTPRSEPKNKPSALELG 207
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P+S+V
Sbjct: 189 KIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEV 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P
Sbjct: 183 VLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQP 224
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P+S+V
Sbjct: 189 KIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEV 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P
Sbjct: 183 VLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQP 224
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 95/100 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P+S+V
Sbjct: 189 KIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEV 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P
Sbjct: 183 VLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQP 224
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 92/99 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD+TGK GPKKPLPDNV+++EP++EV PT P S+
Sbjct: 187 KIMLPWDTTGKMGPKKPLPDNVSIVEPRDEVLPTGPVSE 225
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD+TGK GPKKPLPDNV+++EP++EV P P
Sbjct: 181 VLGIKVKIMLPWDTTGKMGPKKPLPDNVSIVEPRDEVLPTGP 222
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 98/116 (84%), Gaps = 1/116 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIMLPWD GK GPKKP PD++ V EPK+E P P+S+V A L + PVA+V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQ-PVAAV 242
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P ++
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 227
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 90/100 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E P+ P+S V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPSEPTSDV 227
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P+ P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPSEP 223
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKEEILPTTPISE 225
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIMLPWD GK GPKKP PD++ V EPK+E P P+S + A L + PVA+V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPTSDIRSLAPAPLPQ-PVAAV 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEP 223
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 225
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E P P+S V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPTSDV 227
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEP 223
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D TGK+GP+KPLPD V+V EPKEE P P S+
Sbjct: 187 KIMLPFDVTGKSGPRKPLPDTVSVAEPKEEDIPANPFSE 225
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP+D TGK+GP+KPLPD V+V EPKEE PA P
Sbjct: 181 VLGIKVKIMLPFDVTGKSGPRKPLPDTVSVAEPKEEDIPANP 222
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEEV PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTPVSE 225
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEEV P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTP 222
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIMLPWD GK GPKKP PD++ V EPK+E P P+S V A L + PVA+V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSDVRSLAPAPLPQ-PVAAV 242
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 223
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEEV PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTPVSE 225
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEEV P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTP 222
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPVSE 225
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 92/100 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N+YVNTATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GKTGPKKPLPD V++ EPK+E+ P P+S+V
Sbjct: 189 KIMLPWDPVGKTGPKKPLPDYVSIAEPKDEIPPLQPNSEV 228
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLPWD GKTGPKKPLPD V++ EPK+E+ P P ++
Sbjct: 183 VLGIKVKIMLPWDPVGKTGPKKPLPDYVSIAEPKDEIPPLQPNSEV 228
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPVSE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTPISE 225
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTP 222
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 225
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 225
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E P P+S V
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSDV 227
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 223
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/99 (85%), Positives = 89/99 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPKKPLPDNV V EPKEE + P+S+
Sbjct: 188 KIMLPWDPNGKNGPKKPLPDNVIVQEPKEETLYSAPASE 226
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 31/36 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLPWD GK GPKKPLPDNV V EPKEE
Sbjct: 182 VLGIKVKIMLPWDPNGKNGPKKPLPDNVIVQEPKEE 217
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 222
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV----LDKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPQTKPLDDLSEAKV 245
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV----LDKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 187 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPQTKPLDDLSEAKV 243
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 216
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTPISE 225
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTP 222
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAK+MKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 116 MESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 175
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 176 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 214
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 170 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 211
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTPISE 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTP 222
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 143 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 202
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 203 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 241
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 197 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 238
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 126 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 186 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 180 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 62 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 121
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 122 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 160
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 116 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 157
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTPMSE 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTP 222
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTPMSE 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTP 222
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 89/99 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAK+MKFVDGLMIHSG+P +YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPDNVN++EPK+E P P S+
Sbjct: 187 KIMLPWDQTGKIGPKKPLPDNVNIVEPKDESTPATPYSE 225
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPDNVN++EPK+E PA P
Sbjct: 181 VLGIKVKIMLPWDQTGKIGPKKPLPDNVNIVEPKDESTPATP 222
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTPMSE 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETLPTTP 222
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 149 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 208
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++
Sbjct: 209 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETE 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 203 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 238
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 89/99 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPKKP PD++ V EPK+E P P+++
Sbjct: 188 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPTNE 226
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEP 223
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 187 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSESKV 243
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 216
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 136 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 195
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 196 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 252
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 190 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 225
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 77 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 136
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E P P+S V
Sbjct: 137 KIMLPWDKQGKNGPKKPQPDHILVTEPKDEPVPLEPTSDV 176
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 131 VLGIKVKIMLPWDKQGKNGPKKPQPDHILVTEPKDEPVPLEP 172
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL + E V
Sbjct: 189 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDIAEAKV 245
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 135 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 194
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 195 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 233
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 189 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 230
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 189 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 227
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 183 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 224
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK PKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 187 KIMLPWDPTGKIVPKKPLPDHVSIVEPKEEIMPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK PKKPLPD+V+++EPKEE+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIVPKKPLPDHVSIVEPKEEIMPTTP 222
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
K+MLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 189 KVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 245
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+MLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEE 218
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 89/94 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIMLPWD++GK GPKKPLPD+V+++EPKEE+ PT
Sbjct: 187 KIMLPWDTSGKIGPKKPLPDHVSIVEPKEEILPT 220
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 37/39 (94%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKIMLPWD++GK GPKKPLPD+V+++EPKEE+ P
Sbjct: 181 VLGIKVKIMLPWDTSGKIGPKKPLPDHVSIVEPKEEILP 219
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 90 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 149
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 150 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 188
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 144 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 185
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAK+MKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 52 MESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 111
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT P S+
Sbjct: 112 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISE 150
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P P
Sbjct: 106 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTP 147
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEEV T P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLSTTPVSE 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEEV P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLSTTP 222
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTP 222
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 65 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 124
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 125 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 163
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 119 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 160
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTAPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTAP 222
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPKEE PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTP 222
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 92/99 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ESGAKGC+VVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 IESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGKTGPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKTGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 117 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 177 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 215
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 171 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 212
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 42 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 101
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 102 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 140
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 96 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 137
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
+IMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 RIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKV+IMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVRIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 85/90 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN YV++ATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP+D GK GPKKPLPDNV V+EPKEE
Sbjct: 187 KIMLPYDPNGKIGPKKPLPDNVTVIEPKEE 216
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D GK GPKKPLPDNV V+EPKEE
Sbjct: 181 VLGIKVKIMLPYDPNGKIGPKKPLPDNVTVIEPKEE 216
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 191 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 229
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 185 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 226
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKV
Sbjct: 125 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKV 184
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPK+PLPD+V+V+EPK+E P P S+
Sbjct: 185 KIMLPWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHPYSE 223
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPK+PLPD+V+V+EPK+E PA P
Sbjct: 179 VLGIKVKIMLPWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHP 220
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESSAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 11 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 70
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIMLPWD GK GPKKP PD++ V EPK+E P P+S V
Sbjct: 71 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSDV 110
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPKKP PD++ V EPK+E P P
Sbjct: 65 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 106
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSM+FVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 38 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 97
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 98 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 136
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 115 SVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 91 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 133
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 87 IESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 146
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVL----DKPLAKLGEIPV 113
KIMLP+D K GPKKPLPDNV+V+EPKEE P ++ KPL L E V
Sbjct: 147 KIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDLSEAKV 203
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP+D K GPKKPLPDNV+V+EPKEE
Sbjct: 141 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEE 176
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 89/96 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV---NPAFPQK 159
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P F QK
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPIFEQK 227
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 92/99 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV+TA RHV+LRQGVLGIKV
Sbjct: 112 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKV 171
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK++V P+ P S+
Sbjct: 172 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDDVVPSTPISE 210
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK++V P+ P
Sbjct: 166 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDDVVPSTP 207
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 89/96 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV---NPAFPQK 159
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P F QK
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPIFEQK 227
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 89/96 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV---NPAFPQK 159
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P F QK
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPIFEQK 227
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 117 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT
Sbjct: 177 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPT 210
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P
Sbjct: 171 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILP 209
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 117 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIMLPWD +GK GPKKPLPD+V+++EPKEE+ PT
Sbjct: 177 KIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPT 210
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPKEE+ P
Sbjct: 171 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILP 209
>gi|386869506|ref|NP_001247436.1| 40S ribosomal protein S3 isoform 3 [Homo sapiens]
gi|426369805|ref|XP_004051874.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Gorilla gorilla
gorilla]
gi|426369807|ref|XP_004051875.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Gorilla gorilla
gorilla]
gi|426369811|ref|XP_004051877.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Gorilla gorilla
gorilla]
gi|426369815|ref|XP_004051879.1| PREDICTED: 40S ribosomal protein S3 isoform 6 [Gorilla gorilla
gorilla]
gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 55 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 96
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP + YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVSYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK G KKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKIGLKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK G KKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKIGLKKPLPDHVSIVEPKDEILPTTP 222
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC+VVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 90/98 (91%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVK
Sbjct: 128 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVK 187
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
IMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 188 IMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 89/94 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N YV++A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIMLPWD TGKTGPKKPLPD+V+++EPK+E+ P+
Sbjct: 187 KIMLPWDPTGKTGPKKPLPDHVSIVEPKDEIMPS 220
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 38/40 (95%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPK+E+ P+
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDEIMPS 220
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/102 (78%), Positives = 90/102 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCE+VVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV++ATRHVLLRQGVLG+KV
Sbjct: 113 MENGAKGCEIVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKV 172
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLD 102
KIMLPWD+ GK G KKPLPDNV V +PKEE + P S + D
Sbjct: 173 KIMLPWDTLGKIGLKKPLPDNVCVCDPKEETVISGPVSDIKD 214
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIMLPWD+ GK G KKPLPDNV V +PKEE
Sbjct: 167 VLGVKVKIMLPWDTLGKIGLKKPLPDNVCVCDPKEE 202
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 55 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 96
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML WD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLAWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG++GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSRGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDELVPSTPISE 225
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDELVPSTP 222
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++ PK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVGPKDEILPTTPISE 225
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++ PK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVGPKDEILPTTP 222
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 12 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 71
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 72 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 110
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 66 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 107
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTPVSE 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTP 222
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
gi|344246127|gb|EGW02231.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 117
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 55 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 96
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 117 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT
Sbjct: 177 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPT 210
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 36/39 (92%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P
Sbjct: 171 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILP 209
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 86/90 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKV
Sbjct: 99 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKV 158
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLPWD TGK GPK+PLPD+V+++EP+EE
Sbjct: 159 KIMLPWDPTGKIGPKRPLPDHVSIVEPQEE 188
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 34/36 (94%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLPWD TGK GPK+PLPD+V+++EP+EE
Sbjct: 153 VLGIKVKIMLPWDPTGKIGPKRPLPDHVSIVEPQEE 188
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTPVSE 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTP 222
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTPVSE 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTP 222
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTPISE 225
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTP 222
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAK+MKFVDGLMIHSGDP +YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPKKPLPDNVN++EPK+E T P S+
Sbjct: 187 KIMLPWDPQGKIGPKKPLPDNVNIVEPKDEEAITGPRSE 225
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLPWD GK GPKKPLPDNVN++EPK+E
Sbjct: 181 VLGIKVKIMLPWDPQGKIGPKKPLPDNVNIVEPKDE 216
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 91/99 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKS+KFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 132 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 192 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTPISE 230
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 186 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTP 227
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA HVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 89/99 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLM+H+G+P YV+TA RHV LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGKTGPKKPLPD V+++EPK+EV P P+S+
Sbjct: 187 KIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPTSE 225
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGKTGPKKPLPD V+++EPK+EV PA P
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQP 222
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 88/96 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVSLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV---NPAFPQK 159
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P F QK
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPIFEQK 227
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV+ A RHVLLRQGVLGI+V
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQGVLGIQV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIMLPWD TGK GPK+PLPD+V+++EPK+E P P S + +AK E P A
Sbjct: 187 KIMLPWDPTGKIGPKRPLPDHVSIVEPKDERAPEHPYS---EHKVAKASEPPSA 237
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 96 PSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
P++ +DK + + + VLGI+VKIMLPWD TGK GPK+PLPD+V+++EPK+E P
Sbjct: 163 PTNDYVDKAVRHV--LLRQGVLGIQVKIMLPWDPTGKIGPKRPLPDHVSIVEPKDERAPE 220
Query: 156 FPQKKLPFKTAS 167
P + AS
Sbjct: 221 HPYSEHKVAKAS 232
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTPISE 225
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTP 222
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPK+PLPD+V+++EPK E PT P S+
Sbjct: 187 KIMLPWDPNGKLGPKRPLPDHVSIVEPKPETLPTEPYSE 225
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPK+PLPD+V+++EPK E P P
Sbjct: 181 VLGIKVKIMLPWDPNGKLGPKRPLPDHVSIVEPKPETLPTEP 222
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 86/99 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV TA RHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK GPK PLPDNV++ EPKEE P P S+
Sbjct: 188 KIMLPWDPVGKIGPKNPLPDNVSITEPKEEELPQSPYSE 226
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 33/42 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPK PLPDNV++ EPKEE P P
Sbjct: 182 VLGIKVKIMLPWDPVGKIGPKNPLPDNVSITEPKEEELPQSP 223
>gi|405948172|gb|EKC17931.1| 40S ribosomal protein S3, partial [Crassostrea gigas]
Length = 112
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 89/98 (90%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVK 60
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
IMLPWD +GK GPK+PLPD+V+V+EPK+E P P S+
Sbjct: 61 IMLPWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHPYSE 98
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPK+PLPD+V+V+EPK+E PA P
Sbjct: 54 VLGIKVKIMLPWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHP 95
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 88/96 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLPWD +GK GPKKPLPD+V+++EPK+ + PT P
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDVILPTTP 222
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV---NPAFPQK 159
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+ + P F QK
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDVILPTTPIFEQK 227
>gi|410812263|gb|AFV81473.1| 40S ribosomal protein S3, partial [Scrobicularia plana]
Length = 113
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKV
Sbjct: 6 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKV 65
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK++ P P S+
Sbjct: 66 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDDPPPAQPYSE 104
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK++ PA P
Sbjct: 60 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDDPPPAQP 101
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 83/90 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCE VVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 128 MESGARGCEAVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IMLPWD GK GPK+P PD++ V EPK+E
Sbjct: 188 EIMLPWDXQGKNGPKRPQPDHILVTEPKDE 217
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKV+IMLPWD GK GPK+P PD++ V EPK+E
Sbjct: 182 VLGIKVEIMLPWDXQGKNGPKRPQPDHILVTEPKDE 217
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/84 (94%), Positives = 81/84 (96%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+PC DYV+TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPCVDYVDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
KIMLPWD TGK GPKKPLPDNVNV
Sbjct: 187 KIMLPWDPTGKNGPKKPLPDNVNV 210
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 28/30 (93%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNV 145
VLGIKVKIMLPWD TGK GPKKPLPDNVNV
Sbjct: 181 VLGIKVKIMLPWDPTGKNGPKKPLPDNVNV 210
>gi|354477339|ref|XP_003500878.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 152
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRG+RAKSMK VDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 36 MESGAEGCEVVVSGKLRGERAKSMKLVDGLMIHSGDPVNYYVDTAIRHVLLRQGVLGIKV 95
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P SQ
Sbjct: 96 KIMLPWDPSGKIGPKKPLPDHVSIMEPKDEILPTTPISQ 134
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 90 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIMEPKDEILPTTP 131
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 87/100 (87%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV+ ATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML D GK GPKKPLPD V V PKEE+ PT+PSS +
Sbjct: 187 KIMLRCDPNGKVGPKKPLPDCVEVPGPKEEIIPTVPSSDL 226
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 31/46 (67%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIML D GK GPKKPLPD V V PKEE+ P P L
Sbjct: 181 VLGIKVKIMLRCDPNGKVGPKKPLPDCVEVPGPKEEIIPTVPSSDL 226
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 86/94 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 117 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KI LPWD +GK GPKKPLPD+V+++ PKEE+ PT
Sbjct: 177 KITLPWDPSGKIGPKKPLPDHVSIVVPKEEILPT 210
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 34/39 (87%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKI LPWD +GK GPKKPLPD+V+++ PKEE+ P
Sbjct: 171 VLGIKVKITLPWDPSGKIGPKKPLPDHVSIVVPKEEILP 209
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 90/99 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA R+VLLRQ VLGIKV
Sbjct: 124 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRYVLLRQAVLGIKV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPW+++GK P+KPLPD+V+++EPK+E+ PT P S+
Sbjct: 184 KIMLPWETSGKISPQKPLPDHVSIVEPKDEILPTTPISE 222
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 38/43 (88%)
Query: 115 SVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+VLGIKVKIMLPW+++GK P+KPLPD+V+++EPK+E+ P P
Sbjct: 177 AVLGIKVKIMLPWETSGKISPQKPLPDHVSIVEPKDEILPTTP 219
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/87 (88%), Positives = 82/87 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
K+MLP+D K GPKKP+PDNV+V+EP
Sbjct: 189 KVMLPYDPKNKIGPKKPVPDNVSVVEP 215
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVK+MLP+D K GPKKP+PDNV+V+EP
Sbjct: 183 VLGIKVKVMLPYDPKNKIGPKKPVPDNVSVVEP 215
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/87 (88%), Positives = 83/87 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIMLPWD TGK GPK+PLPD+V+++EP
Sbjct: 187 KIMLPWDPTGKLGPKRPLPDHVSIVEP 213
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIMLPWD TGK GPK+PLPD+V+++EP
Sbjct: 181 VLGIKVKIMLPWDPTGKLGPKRPLPDHVSIVEP 213
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/87 (88%), Positives = 80/87 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV
Sbjct: 80 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 139
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIMLPWD GK GPKKP PD++ V P
Sbjct: 140 KIMLPWDQQGKNGPKKPQPDHILVTSP 166
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIMLPWD GK GPKKP PD++ V P
Sbjct: 134 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTSP 166
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 89/99 (89%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMK VDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPK+PLPD+V+++EPK+E P+ P S+
Sbjct: 187 KIMLPWDPSGKIGPKEPLPDHVSIVEPKDETIPSTPVSE 225
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPK+PLPD+V+++EPK+E P+ P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKEPLPDHVSIVEPKDETIPSTP 222
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 84/92 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P N YV+TA RHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
KIMLPWD K GPK+PLPDNV++LEPK+E +
Sbjct: 188 KIMLPWDPNNKNGPKRPLPDNVSILEPKDETH 219
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
VLGIKVKIMLPWD K GPK+PLPDNV++LEPK+E + A
Sbjct: 182 VLGIKVKIMLPWDPNNKNGPKRPLPDNVSILEPKDETHIA 221
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 85/94 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ A RHVLLRQGVLGIKV
Sbjct: 117 MENGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KIM PWD +GK GPKKPLPD+V+V+EPKEEV P
Sbjct: 177 KIMRPWDPSGKIGPKKPLPDHVSVVEPKEEVLPV 210
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
VLGIKVKIM PWD +GK GPKKPLPD+V+V+EPKEEV P
Sbjct: 171 VLGIKVKIMRPWDPSGKIGPKKPLPDHVSVVEPKEEVLP 209
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 88/98 (89%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P +DYV+TA RHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKVK 60
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
IMLPWD +GK GPK PLPD ++++EPKEE P+ P S+
Sbjct: 61 IMLPWDPSGKIGPKHPLPDQISIVEPKEEEIPSQPKSE 98
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQ 158
VLGIKVKIMLPWD +GK GPK PLPD ++++EPKEE P+ P+
Sbjct: 54 VLGIKVKIMLPWDPSGKIGPKHPLPDQISIVEPKEEEIPSQPK 96
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVL RQGVLGIKV
Sbjct: 91 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLFRQGVLGIKV 150
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPW+ TGK GPKKPLPD+++++ PK+E+ T P S+
Sbjct: 151 KIMLPWNPTGKIGPKKPLPDHMSIVGPKDEILLTTPISE 189
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIMLPW+ TGK GPKKPLPD+++++ PK+E+
Sbjct: 145 VLGIKVKIMLPWNPTGKIGPKKPLPDHMSIVGPKDEI 181
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC+V+ SGKLRGQRAKSMKFVDGL IHSGDP N YV TA HVLLRQGVLGIKV
Sbjct: 1 MESGAKGCKVMASGKLRGQRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGKTGPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 61 KIMLPWDPTGKTGPKKPLPDHVSIVEPKDEILPTTPISE 99
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPK+E+ P P
Sbjct: 55 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDEILPTTP 96
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 85/99 (85%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCE+VVSGKLRGQRAKSMKFVDGLMIH+G PC DYV+TA RHV LRQGVLGIKV
Sbjct: 128 MESGAKGCEIVVSGKLRGQRAKSMKFVDGLMIHTGQPCVDYVDTAIRHVYLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D TGK+GPKKPLPD V++ EPK EV SS+
Sbjct: 188 KIMLPTDPTGKSGPKKPLPDYVSISEPKSEVFEQYDSSK 226
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLP D TGK+GPKKPLPD V++ EPK EV + K
Sbjct: 182 VLGIKVKIMLPTDPTGKSGPKKPLPDYVSISEPKSEVFEQYDSSK 226
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 83/91 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLRGQRAKSMKF DG MIHSG P +Y++TA RHV LRQGVLGIKV
Sbjct: 126 MESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 186 KIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 216
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 180 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 216
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 83/91 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLRGQRAKSMKF DG MIHSG P +Y++TA RHV LRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 187 KIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 217
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 217
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 86/99 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG P DYV+ A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P+D TGKTGPKKPLPD +++ EPKEE P+ P S+
Sbjct: 187 KIMRPFDVTGKTGPKKPLPDVISISEPKEEEIPSQPWSE 225
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 35/42 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIM P+D TGKTGPKKPLPD +++ EPKEE P+ P
Sbjct: 181 VLGIKVKIMRPFDVTGKTGPKKPLPDVISISEPKEEEIPSQP 222
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 82/90 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP D GK GPKKPLPD+V ++EPK+E
Sbjct: 187 KIMLPCDPNGKLGPKKPLPDHVTIMEPKKE 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP D GK GPKKPLPD+V ++EPK+E
Sbjct: 181 VLGIKVKIMLPCDPNGKLGPKKPLPDHVTIMEPKKE 216
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 88/108 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCE++VSGKLRGQRAK+MKFVDG+MIHSG P N+YV A RHV LRQGVLGIKV
Sbjct: 149 MESQAKGCEIIVSGKLRGQRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGIKV 208
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKL 108
KIMLP D GK GP+ PLPD++ +LEP+ E NPT+P S+ L+ P KL
Sbjct: 209 KIMLPHDPEGKIGPRNPLPDHIQILEPRPEDNPTVPRSECLEAPEEKL 256
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLP D GK GP+ PLPD++ +LEP+ E NP P+ +
Sbjct: 203 VLGIKVKIMLPHDPEGKIGPRNPLPDHIQILEPRPEDNPTVPRSE 247
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 86/99 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMK DGLMIHSG+P YV+TA RHV LRQGVLGIKV
Sbjct: 73 MESGAKGCEVVVSGKLRGQRAKSMKSTDGLMIHSGEPRRHYVDTAVRHVHLRQGVLGIKV 132
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGK GP+ PLPD++N++EPK+EV PT P S+
Sbjct: 133 KIMLPWDPTGKNGPRTPLPDHINIVEPKDEVLPTEPHSE 171
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQ 158
VLGIKVKIMLPWD TGK GP+ PLPD++N++EPK+EV P P
Sbjct: 127 VLGIKVKIMLPWDPTGKNGPRTPLPDHINIVEPKDEVLPTEPH 169
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 83/90 (92%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV TA RHVLLRQGVLGIKV
Sbjct: 139 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKV 198
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP D GK GPKKPLPD+V+++EPK+E
Sbjct: 199 KIMLPCDPNGKLGPKKPLPDHVSIMEPKKE 228
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP D GK GPKKPLPD+V+++EPK+E
Sbjct: 193 VLGIKVKIMLPCDPNGKLGPKKPLPDHVSIMEPKKE 228
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 88/99 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRA+SMKFV GL+IHSGDP N Y +TA RHVLLRQGVLGIKV
Sbjct: 170 MESGAKGCEVVVSGKLRGQRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQGVLGIKV 229
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
K+MLPWD + K GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 230 KLMLPWDPSRKIGPKKPLPDHVSMVEPKDEILPTTPISE 268
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVK+MLPWD + K GPKKPLPD+V+++EPK+E+ P P
Sbjct: 224 VLGIKVKLMLPWDPSRKIGPKKPLPDHVSMVEPKDEILPTTP 265
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 86/99 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC+VV SGKLRGQRAKSMK VDGLMIHS DP N YV TA HVLLRQGVLGIKV
Sbjct: 127 MESGAKGCKVVASGKLRGQRAKSMKSVDGLMIHSRDPINYYVGTAVCHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD TGKTGPKKPLPD+V+V+E K+E+ PT P S+
Sbjct: 187 KIMLPWDPTGKTGPKKPLPDHVSVVELKDEILPTTPISE 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGKTGPKKPLPD+V+V+E K+E+ P P
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSVVELKDEILPTTP 222
>gi|440907841|gb|ELR57934.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 158
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 85/94 (90%)
Query: 6 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 65
K CEVVVSGKL+GQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLP
Sbjct: 47 KDCEVVVSGKLQGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 106
Query: 66 WDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
WD TGK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 107 WDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 140
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD TGK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 96 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 137
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 83/91 (91%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ESGAKGCEV+VSGKLRGQRAKSMKF DG MIHSG P +Y++TA RHV LRQGVLGIKV
Sbjct: 7 LESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKV 66
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 67 KIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 97
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIMLPWD TGKTGPKKPLPD+V+++EPKEEV
Sbjct: 61 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEV 97
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 84/93 (90%)
Query: 7 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPW 66
GCEVVVSGKLRGQRAKSMKFVDGLMIHSG+P NDYV+TA RHVLLRQGVLGIKVKIMLPW
Sbjct: 1 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLPW 60
Query: 67 DSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
D GK GPK+PLPD+V+++EPK+E P P+S+
Sbjct: 61 DPAGKIGPKRPLPDHVSIVEPKDETPPAQPTSE 93
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD GK GPK+PLPD+V+++EPK+E PA P
Sbjct: 49 VLGIKVKIMLPWDPAGKIGPKRPLPDHVSIVEPKDETPPAQP 90
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 86/99 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RH + VLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHPSVPFSVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E+ PT P S+
Sbjct: 187 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 115 SVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
SVLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E+ P P
Sbjct: 180 SVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/99 (74%), Positives = 85/99 (85%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLRGQRAKSMKFVDG MIHSG P +Y+++A HV LRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D TGK+GPKKPLPD V+V+EPK++V T P S+
Sbjct: 187 KIMLPHDPTGKSGPKKPLPDQVSVVEPKDDVRVTEPYSE 225
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 35/42 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP D TGK+GPKKPLPD V+V+EPK++V P
Sbjct: 181 VLGIKVKIMLPHDPTGKSGPKKPLPDQVSVVEPKDDVRVTEP 222
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG+KGCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA V +RQGVLGIKV
Sbjct: 127 MESGSKGCEVVVSGKLRGQRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P S+
Sbjct: 186 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTPVSE 224
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLPWD +GK GPKKPLPD+V+++EPK+E P+ P
Sbjct: 180 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETIPSTP 221
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 84/103 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA+GCE+VVSGKLRGQRAK+MKF+DGLMIHSGDP NDYV A RHVLLRQGVLGIKV
Sbjct: 129 MDSGAQGCEIVVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDK 103
KIMLP D G KKPLPD++ +++PK+E T P S+ DK
Sbjct: 189 KIMLPHDPKEGKGVKKPLPDHIQIVQPKDETAITQPYSESKDK 231
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP D G KKPLPD++ +++PK+E
Sbjct: 183 VLGIKVKIMLPHDPKEGKGVKKPLPDHIQIVQPKDE 218
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 82/99 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 129 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D G+ GP+ LPD+V ++EP+EEV P P SQ
Sbjct: 189 KIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
V+GIKVKIMLP+D G+ GP+ LPD+V ++EP+EEV P P +
Sbjct: 183 VIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 82/99 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 137 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 196
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D G+ GP+ LPD+V ++EP+EEV P P SQ
Sbjct: 197 KIMLPYDPRGQNGPRIALPDHVQIVEPQEEVIPKEPHSQ 235
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
V+GIKVKIMLP+D G+ GP+ LPD+V ++EP+EEV P P +
Sbjct: 191 VIGIKVKIMLPYDPRGQNGPRIALPDHVQIVEPQEEVIPKEPHSQ 235
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 129 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D G+ GPK LPD+V +LEP++EV P P SQ
Sbjct: 189 KIMLPYDPRGQNGPKIALPDHVQILEPQDEVLPKEPHSQ 227
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
V+GIKVKIMLP+D G+ GPK LPD+V +LEP++EV P P +
Sbjct: 183 VIGIKVKIMLPYDPRGQNGPKIALPDHVQILEPQDEVLPKEPHSQ 227
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 129 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D G GP+ LPD+V ++EP+EEV P P SQ
Sbjct: 189 KIMLPYDPRGMNGPRNALPDHVQIMEPQEEVIPKEPHSQ 227
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
V+GIKVKIMLP+D G GP+ LPD+V ++EP+EEV P P +
Sbjct: 183 VIGIKVKIMLPYDPRGMNGPRNALPDHVQIMEPQEEVIPKEPHSQ 227
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 78/92 (84%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEV+VSGKLRGQRAKSMKFVDGLMIHSGDP N+YV RHV+LRQGV+GIKV
Sbjct: 219 MESQAKGCEVIVSGKLRGQRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQGVIGIKV 278
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
KIMLP D G GPKKPLPD+V V EPKEE+
Sbjct: 279 KIMLPHDPKGVYGPKKPLPDSVVVFEPKEEIE 310
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
V+GIKVKIMLP D G GPKKPLPD+V V EPKEE+
Sbjct: 273 VIGIKVKIMLPHDPKGVYGPKKPLPDSVVVFEPKEEIE 310
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 80/98 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKFVDG MIHSG P +Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVISGKLRAARAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSS 98
KIM WD +GKTGPKKPLPD V +LEPK++ +P S
Sbjct: 187 KIMQEWDPSGKTGPKKPLPDLVTILEPKDDEPTPVPVS 224
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD +GKTGPKKPLPD V +LEPK++
Sbjct: 181 VLGIKVKIMQEWDPSGKTGPKKPLPDLVTILEPKDD 216
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 82/99 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N+Y++ A RHV L QG+LGIKV
Sbjct: 124 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 184 KIMLDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 222
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 96 PSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
P + +DK + + ++P +LGIKVKIML DS+GK GP+KPLPD V +L KEEV P
Sbjct: 160 PVNNYIDKAVRHV-QLP-QGILGIKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEEVLPT 217
Query: 156 FP 157
P
Sbjct: 218 AP 219
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 82/99 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N+Y++ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMLDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 96 PSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
P + +DK + + ++P +LGIKVKIML DS+GK GP+KPLPD V +L KEEV P
Sbjct: 165 PVNNYIDKAVRHV-QLP-QGILGIKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEEVLPT 222
Query: 156 FP 157
P
Sbjct: 223 AP 224
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +D+++TATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAHDFIDTATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 191 KIMRGSDPEGKAGPQKSLPDSVTIIEPKEEQPIVQPMSQ 229
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKAGPQKSLPDSVTIIEPKEE 220
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAKSMKF DGLMIHSGDP N Y++ A RHVLL QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKSMKFSDGLMIHSGDPVNYYIDKAVRHVLLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GKTGP+KPLPD V +L KEE P P S+
Sbjct: 189 KIMMNHDSSGKTGPRKPLPDTVTILAAKEETAPIHPYSE 227
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GKTGP+KPLPD V +L KEE P P
Sbjct: 183 ILGIKVKIMMNHDSSGKTGPRKPLPDTVTILAAKEETAPIHP 224
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V+VLEPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQTVVQPMSQ 228
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V+VLEPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEE 219
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V++LEPKEE + P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVSILEPKEEQSVVQPMSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V++LEPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVSILEPKEE 219
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 77/91 (84%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLRGQRAK+MKF DGLMIH+G P +YV+TA RHV+LRQGV+G+KV
Sbjct: 130 MESGAKGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGVIGLKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
K+MLP D GK GPK P PD V + EPKEEV
Sbjct: 190 KVMLPHDPAGKVGPKTPYPDIVEIREPKEEV 220
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
V+G+KVK+MLP D GK GPK P PD V + EPKEEV
Sbjct: 184 VIGLKVKVMLPHDPAGKVGPKTPYPDIVEIREPKEEV 220
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 210 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQGVLGIKV 269
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V V+EPKEE PSSQ
Sbjct: 270 KIMRGSDPDGKSGPQKSLPDTVTVIEPKEEAPIGQPSSQ 308
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 28/37 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIM D GK+GP+K LPD V V+EPKEE
Sbjct: 264 VLGIKVKIMRGSDPDGKSGPQKSLPDTVTVIEPKEEA 300
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V+VLEPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQAVVQPMSQ 228
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V+VLEPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEE 219
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 129 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP+D G+ GP+ LPD+V + +P +EV PT P SQ
Sbjct: 189 KIMLPYDPRGQNGPRNALPDHVQIEDPVDEVLPTEPHSQ 227
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
V+GIKVKIMLP+D G+ GP+ LPD+V + +P +EV P P +
Sbjct: 183 VIGIKVKIMLPYDPRGQNGPRNALPDHVQIEDPVDEVLPTEPHSQ 227
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EVVVSGKLRGQRAK+MKF DG M+HSG P Y++ A RHVLLRQGVLG+KV
Sbjct: 128 MESGAKGVEVVVSGKLRGQRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVLGLKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML D TG+ GPK PLPD V +LEPK+E P+ PSS+
Sbjct: 188 KIMLAQDPTGRAGPKTPLPDIVTILEPKDEALPSAPSSE 226
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 91 VNPTIPSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+ P++ +D+ + + + VLG+KVKIML D TG+ GPK PLPD V +LEPK+
Sbjct: 159 VHSGFPTTYYIDRAVRHV--LLRQGVLGLKVKIMLAQDPTGRAGPKTPLPDIVTILEPKD 216
Query: 151 EVNPAFP 157
E P+ P
Sbjct: 217 EALPSAP 223
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 75/97 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM WD GK GP PLPD + +L+PKEE + I S
Sbjct: 190 KIMKAWDPEGKLGPSTPLPDQITILDPKEEASVQISS 226
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
VLGIKVKIM WD GK GP PLPD + +L+PKEE +
Sbjct: 184 VLGIKVKIMKAWDPEGKLGPSTPLPDQITILDPKEEAS 221
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES A+GCEV+VSGKLRGQRAKSMKFVDGLMIHSG P NDY+ A RHV LRQGVLGIKV
Sbjct: 129 MESSAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D G+ GP+ LPD +++ EP + NPT P S+
Sbjct: 189 KIMLPHDPKGQMGPRGALPDQIHIQEPNDAPNPTQPYSE 227
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIMLP D G+ GP+ LPD +++ EP + NP P
Sbjct: 183 VLGIKVKIMLPHDPKGQMGPRGALPDQIHIQEPNDAPNPTQP 224
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 132 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE + P SQ
Sbjct: 192 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQSVVQPMSQ 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 186 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 221
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 84/115 (73%), Gaps = 5/115 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
KIML WD GK GPK PLPD V + PKEE P++ LA E+PVAS
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAA-----VLATNIEVPVAS 236
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 29/42 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GPK PLPD V + PKEE A P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARP 222
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 191 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 250
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V V+EPKEE + P SQ
Sbjct: 251 KIMRGSDPEGKSGPQKTLPDSVTVIEPKEEQSVVQPMSQ 289
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V V+EPKEE
Sbjct: 245 VLGIKVKIMRGSDPEGKSGPQKTLPDSVTVIEPKEE 280
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE T P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQPVTQPISQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEE 219
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 3/109 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQVLDKPLA 106
KIML WD GK GPK PLPD V + PKEE + P S++ ++ P+A
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEEDEYIRPAAVSAEEVEVPVA 235
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEDEYIRPA 223
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKEEQAVLQPVSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE T P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPVTQPISQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 101 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 160
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 161 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 199
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 155 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 196
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAAVLQPVSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V +LEPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQPISQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V +LEPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEE 219
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
KIML WD GK GPK PLPD V + PKEE P++ LA E+PVAS
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAA-----VLATNIEVPVAS 236
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 29/42 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GPK PLPD V + PKEE A P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARP 222
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQVLDKPLA 106
KIML WD GK GPK PLPD V + PKEE + P S+ ++ P+A
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYIQPAAVSASDIEVPVA 235
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYIQPA 223
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE + P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQSVVQPMSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEE 219
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPLSQ 228
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V +LEPKEE P SQ
Sbjct: 191 KIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQPVSQ 229
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V +LEPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEE 220
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE T P SQ
Sbjct: 190 KIMRGSDPDGKAGPQKTLPDAVTIIEPKEEQPVTQPISQ 228
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPDGKAGPQKTLPDAVTIIEPKEE 219
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC V+VSGKLRGQRAKSMKF DGLMIH+G+P Y++ A HV LRQGVLGIKV
Sbjct: 126 MESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
+IMLP D TGK GP+KPLPD V+V EPKEE +
Sbjct: 186 QIMLPHDPTGKMGPRKPLPDQVSVAEPKEETH 217
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
VLGIKV+IMLP D TGK GP+KPLPD V+V EPKEE + A
Sbjct: 180 VLGIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHHA 219
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC V+VSGKLRGQRAKSMKF DGLMIH+G+P Y++ A HV LRQGVLGIKV
Sbjct: 126 MESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
+IMLP D TGK GP+KPLPD V+V EPKEE +
Sbjct: 186 QIMLPHDPTGKMGPRKPLPDQVSVAEPKEETH 217
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPA 155
VLGIKV+IMLP D TGK GP+KPLPD V+V EPKEE + A
Sbjct: 180 VLGIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHYA 219
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAPVVQPMSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGL+IHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 77/90 (85%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P ++Y+++ATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IM WD TGK GP+ PLPD V VL PKEE
Sbjct: 187 RIMKEWDPTGKVGPRTPLPDVVTVLAPKEE 216
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKV+IM WD TGK GP+ PLPD V VL PKEE
Sbjct: 181 VLGIKVRIMKEWDPTGKVGPRTPLPDVVTVLAPKEE 216
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKEETPVVQPMSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 37 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 96
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 97 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 135
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 91 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 132
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIML WD GK GPK PLPD V + PKEE P++ LA E+PVA
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAA-----VLATDIEVPVA 235
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 29/42 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GPK PLPD V + PKEE A P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARP 222
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 77/98 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDQAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSS 98
KIM WD G+TGP KPLPD+V +++ KEE PSS
Sbjct: 187 KIMKGWDPEGRTGPSKPLPDSVTIMDAKEEAPVGPPSS 224
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIM WD G+TGP KPLPD+V +++ KEE
Sbjct: 181 VLGIKVKIMKGWDPEGRTGPSKPLPDSVTIMDAKEEA 217
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPLSQ 228
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 219
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/117 (62%), Positives = 81/117 (69%), Gaps = 10/117 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP----------KEEVNPTIPSSQVLDKPLAK 107
KIM WD G+ GPKKPLPD+V +LEP E+ P IP + P A+
Sbjct: 187 KIMKGWDPEGQLGPKKPLPDSVQILEPPVDKIVSEPSSEQREPAIPVQPIPQAPAAE 243
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 10/57 (17%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP----------KEEVNPAFPQKKLP 162
VLGIKVKIM WD G+ GPKKPLPD+V +LEP E+ PA P + +P
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPKKPLPDSVQILEPPVDKIVSEPSSEQREPAIPVQPIP 237
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES A+GCEV+VSGKLRGQRAKSMKFVDGLMIHSG P NDY+ A RHV LRQGVLGIKV
Sbjct: 129 MESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D G GP+ LPD +++ EP E NP P S+
Sbjct: 189 KIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 227
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQ 158
VLGIKVKIMLP D G GP+ LPD +++ EP E NP P+
Sbjct: 183 VLGIKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPE 225
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES A+GCEV+VSGKLRGQRAKSMKFVDGLMIHSG P NDY+ A RHV LRQGVLGIKV
Sbjct: 130 MESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D G GP+ LPD +++ EP E NP P S+
Sbjct: 190 KIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 228
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQ 158
VLGIKVKIMLP D G GP+ LPD +++ EP E NP P+
Sbjct: 184 VLGIKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPE 226
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 60 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE T P SQ
Sbjct: 120 KIMRGSDPDGKAGPQKTLPDAVTIIEPKEEQPVTQPISQ 158
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 114 VLGIKVKIMRGSDPDGKAGPQKTLPDAVTIIEPKEE 149
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 79/96 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIM+ DS+GK GP+KPLPD V +L KEEV PT P
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 79/96 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIM+ DS+GK GP+KPLPD V +L KEEV PT P
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKEEPAVLQPVSQ 228
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++++TATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAREFIDTATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V V+EPKEE P SQ
Sbjct: 190 KIMRGSDPDGKSGPQKTLPDVVTVIEPKEETPVVQPMSQ 228
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V V+EPKEE
Sbjct: 184 VLGIKVKIMRGSDPDGKSGPQKTLPDVVTVIEPKEE 219
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES A+GCEV+VSGKLRGQRAKSMKFVDGLMIHSG P NDY+ A RHV LRQGVLGIKV
Sbjct: 130 MESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D G GP+ LPD +++ EP E NP P S+
Sbjct: 190 KIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLP D G GP+ LPD +++ EP E NP P+ +
Sbjct: 184 VLGIKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 228
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 79/103 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV++SGKLR QRAKSMKF DG MI +G P DY++TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIISGKLRAQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDK 103
KIM P+D TG+ GP LPD + + EPKEE P P Q LD+
Sbjct: 187 KIMRPYDPTGRNGPSTVLPDTLEIREPKEEDVPEKPYVQRLDE 229
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIM P+D TG+ GP LPD + + EPKEE P P
Sbjct: 181 VLGIKVKIMRPYDPTGRNGPSTVLPDTLEIREPKEEDVPEKP 222
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D G+TGP+KPLPD+V +LEP + P+ PSS+
Sbjct: 187 KIMKGSDPDGQTGPRKPLPDSVQILEPPVDKIPSEPSSE 225
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM D G+TGP+KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGSDPDGQTGPRKPLPDSVQILEP 213
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 191 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPMSQ 229
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 220
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ-VLDKPLAKL 108
KIM D GK GP K LPD V ++EPKEE P+SQ KP+A +
Sbjct: 189 KIMRGSDPDGKAGPNKSLPDTVTIIEPKEEQPVLAPNSQDYTAKPVANI 237
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD V ++EPKEE
Sbjct: 183 VLGIKVKIMRGSDPDGKAGPNKSLPDTVTIIEPKEE 218
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 191 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPMSQ 229
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 220
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 191 KIMRGSDPEGKSGPQKTLPDSVTIIEPKEEQPVLQPMSQ 229
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEE 220
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 131 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 191 KIMRGSDPEGKSGPQKTLPDSVTIIEPKEEQPVLQPMSQ 229
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 185 VLGIKVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEE 220
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES A+GCEV+VSGKLRGQRAKSMKFVDGLMIHSG P NDY+ A RHV LRQGVLGIKV
Sbjct: 82 MESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKV 141
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLP D G GP+ LPD +++ EP E NP P S+
Sbjct: 142 KIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 180
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLGIKVKIMLP D G GP+ LPD +++ EP E NP P+ +
Sbjct: 136 VLGIKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHPESE 180
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 81/99 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF DGLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 1 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 61 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 99
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 55 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 96
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 125 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 184
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 185 KIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVSQ 223
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 179 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 214
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 219
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPVSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 219
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPMSQ 228
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLL+QGVLGIKV
Sbjct: 132 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP K LPD+V ++EPKEE + P SQ
Sbjct: 192 KIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQPMSQ 230
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP K LPD+V ++EPKEE
Sbjct: 186 VLGIKVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEE 221
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 77/100 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML WD GK GPK PLPD V + PKEE P++ V
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVV 226
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPA 223
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQPVSQ 228
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLL+QGVLGIKV
Sbjct: 132 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP K LPD+V ++EPKEE + P SQ
Sbjct: 192 KIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQPMSQ 230
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP K LPD+V ++EPKEE
Sbjct: 186 VLGIKVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEE 221
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 75/99 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++++TATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD V + EPKEE P SQ
Sbjct: 190 KIMRGSDPDGKAGPSKSLPDAVTIFEPKEEQVVLQPVSQ 228
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 25/36 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD V + EPKEE
Sbjct: 184 VLGIKVKIMRGSDPDGKAGPSKSLPDAVTIFEPKEE 219
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPK+E P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIEPKDEAPVVQPMSQ 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPK+E
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKDE 219
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 188 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPISQ 226
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 182 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 217
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN+YV+TATRHVLLRQGVLGIKV
Sbjct: 94 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKV 153
Query: 61 KIMLPWDSTGK 71
KIMLPWD GK
Sbjct: 154 KIMLPWDPNGK 164
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 80/99 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGK++GQRAK+MKF GLMIHSGDP N YV+ A RHV L QG+LGIKV
Sbjct: 129 MESGARGAEVIVSGKIKGQRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM+ DS+GK GP+KPLPD V +L KEEV PT P S+
Sbjct: 189 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAPYSE 227
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIM+ DS+GK GP+KPLPD V +L KEEV P P
Sbjct: 183 ILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEVLPTAP 224
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDAVTIIDPKEETPVVQPMSQ 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDAVTIIDPKEE 219
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG MIHSG P D+V+ A RHVLL+QGVLGIKV
Sbjct: 127 MESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFVDYAVRHVLLKQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPV 113
KIM WD G+TGP KPLPD+V +LEP + T PSS+ + PL +PV
Sbjct: 187 KIMKGWDPQGETGPSKPLPDSVQILEPPVDKIITEPSSEQRE-PLLPTHAVPV 238
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+TGP KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGWDPQGETGPSKPLPDSVQILEP 213
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQPMSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEE 219
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 75/99 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++++TATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD V + EPKEE P SQ
Sbjct: 188 KIMRGSDPDGKAGPSKSLPDAVTIFEPKEEQVVLQPVSQ 226
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 25/36 (69%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD V + EPKEE
Sbjct: 182 VLGIKVKIMRGSDPDGKAGPSKSLPDAVTIFEPKEE 217
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPSKTLPDSVTIIEPKEEQPVVQPMSQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPSKTLPDSVTIIEPKEE 219
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQPMSQ 228
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEE 219
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 71/87 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G GPKKPLPDNV +LEP
Sbjct: 187 KIMKGWDPEGLVGPKKPLPDNVTILEP 213
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G GPKKPLPDNV +LEP
Sbjct: 181 VLGIKVKIMKGWDPEGLVGPKKPLPDNVTILEP 213
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHPISQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEE 219
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC V VSG LR QRAK+MKF DG M+HSG P DYV+TA RHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCVVTVSGLLRAQRAKTMKFTDGYMVHSGQPVKDYVDTAVRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IMLP+D GK GP KPLPDNV + EPKE+
Sbjct: 187 TIMLPYDPEGKKGPSKPLPDNVQIYEPKED 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKV IMLP+D GK GP KPLPDNV + EPKE+
Sbjct: 181 VLGIKVTIMLPYDPEGKKGPSKPLPDNVQIYEPKED 216
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 77/100 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML WD GK GPK PLPD V + PKEE P++ V
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVV 226
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPA 223
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQPVLQPMSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 219
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 80/103 (77%), Gaps = 3/103 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQV 100
KIML WD GK GPK PLPD V + PKEE + P IP++ +
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADI 229
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GPK PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEE 216
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 77/100 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML WD GK GPK PLPD V + PKEE P++ V
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVV 226
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPA 223
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 77/100 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML WD GK GPK PLPD V + PKEE P++ V
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVV 226
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPA 223
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHPISQ 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEE 219
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 121 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V +++PKEE P SQ
Sbjct: 181 KIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHPISQ 219
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V +++PKEE
Sbjct: 175 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEE 210
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQPVSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 70/75 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG LGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGGLGIKV 186
Query: 61 KIMLPWDSTGKTGPK 75
KIMLPWD+TGK GP+
Sbjct: 187 KIMLPWDTTGKMGPR 201
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 19/20 (95%)
Query: 117 LGIKVKIMLPWDSTGKTGPK 136
LGIKVKIMLPWD+TGK GP+
Sbjct: 182 LGIKVKIMLPWDTTGKMGPR 201
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQPVSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 74/87 (85%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V++A RHV+L+QGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSRDFVDSAVRHVMLKQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD TG+TGPKKPLPD V ++EP
Sbjct: 187 KIMKGWDPTGETGPKKPLPDMVTIIEP 213
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD TG+TGPKKPLPD V ++EP
Sbjct: 181 VLGIKVKIMKGWDPTGETGPKKPLPDMVTIIEP 213
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCE++VSGKLRGQRAK+MKF+DGLMIHSGDP NDYV A RHVLLRQGVLGIKV
Sbjct: 129 MESGAQGCEIIVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIMLP D G KKPLPD++ +++P
Sbjct: 189 KIMLPHDPKEGKGVKKPLPDHIQIVQP 215
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIMLP D G KKPLPD++ +++P
Sbjct: 183 VLGIKVKIMLPHDPKEGKGVKKPLPDHIQIVQP 215
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGK+R RAK+MKF DG MIHSG+P +++ TA RHV LRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML D TG+ GPK+ LPD V +LEPK+E T PS+Q
Sbjct: 190 KIMLDNDPTGRNGPKQTLPDIVTILEPKDEAPITEPSAQ 228
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML D TG+ GPK+ LPD V +LEPK+E
Sbjct: 184 VLGIKVKIMLDNDPTGRNGPKQTLPDIVTILEPKDE 219
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P N++++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPANEFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKSLPDSVTIIDPKEEQPILQPMSQ 228
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKSLPDSVTIIDPKEE 219
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHSPKEE 216
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPA 223
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 75/99 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPSKSLPDAVTIIEPKEEQPVVQPMSQ 228
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPSKSLPDAVTIIEPKEE 219
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 60 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V ++E KEE T P SQ
Sbjct: 120 KIMRGSDPDGKAGPQKTLPDAVTIIESKEEQPVTQPISQ 158
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V ++E KEE
Sbjct: 114 VLGIKVKIMRGSDPDGKAGPQKTLPDAVTIIESKEE 149
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHSPKEE 216
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIRPA 223
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHSPKEE 216
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
VLGIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPA 223
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP + LPD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPSQTLPDSVTIIEPKEEQPVVQPMSQ 228
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP + LPD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPSQTLPDSVTIIEPKEE 219
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGK+R RAK+MKF DG MIHSG+P +++ TA RHV LRQGVLGIKV
Sbjct: 119 MESGAKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQGVLGIKV 178
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML D TG+ GPK+ LPD V +LEPK+E T PS+Q
Sbjct: 179 KIMLDNDPTGRNGPKQTLPDIVTILEPKDEAPITEPSAQ 217
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML D TG+ GPK+ LPD V +LEPK+E
Sbjct: 173 VLGIKVKIMLDNDPTGRNGPKQTLPDIVTILEPKDE 208
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 84/115 (73%), Gaps = 10/115 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK-EEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIML WD GK GP PLPD V + PK EE+ P + +++V E+PVA
Sbjct: 188 KIMLDWDPKGKQGPTTPLPDLVTIHSPKEEELRPPVLATEV---------EVPVA 233
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 182 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHSPKEE 217
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHV LRQGVLGIKV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVFLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K PD+V ++EPKEE P SQ
Sbjct: 190 KIMRGSDPEGKSGPQKSFPDSVTIIEPKEEQPVVQPMSQ 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K PD+V ++EPKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKSGPQKSFPDSVTIIEPKEE 219
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P +++++ATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD+V ++EPKEE P SQ
Sbjct: 187 KIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQPMSQ 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD+V ++EPKEE
Sbjct: 181 VLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 216
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEE 216
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GPK PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEE 216
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEE 216
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GPK PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEE 216
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG P ND+++TATRHVLLRQGVLGIKV
Sbjct: 130 MESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDTATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIDPKEEQPVLQPMSQ 228
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEE 219
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 84/114 (73%), Gaps = 10/114 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIML WD GK GP PLPD V + EPKEE + L +PLA EIPVA
Sbjct: 189 KIMLDWDPKGKQGPTMPLPDLVTIHEPKEE-------DEFL-RPLA--AEIPVA 232
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + EPKEE
Sbjct: 183 VLGIKVKIMLDWDPKGKQGPTMPLPDLVTIHEPKEE 218
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 913 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 972
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 973 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPLSQ 1011
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 967 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 1002
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP KPLPD V + PK+E
Sbjct: 187 KIMLDWDPKGKQGPTKPLPDFVTIYTPKDE 216
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP KPLPD V + PK+E
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTKPLPDFVTIYTPKDE 216
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 76/99 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 132 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP K LPD+V ++EPK E P SQ
Sbjct: 192 KIMRGSDPEGKAGPTKSLPDSVTIIEPKNEDPVVQPMSQ 230
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP K LPD+V ++EPK E
Sbjct: 186 VLGIKVKIMRGSDPEGKAGPTKSLPDSVTIIEPKNE 221
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSKDFVDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G GP+KPLPD+V +LEP
Sbjct: 187 KIMKGWDPEGVLGPRKPLPDSVQILEP 213
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G GP+KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGWDPEGVLGPRKPLPDSVQILEP 213
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 74/84 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLRGQRAKSMKFVDG MIHSG P +Y+++A HV LRQGVLGIKV
Sbjct: 93 MESGAKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGYPTREYIDSAVTHVHLRQGVLGIKV 152
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
KIMLP D TGK+GPKKPLPD V+V
Sbjct: 153 KIMLPHDPTGKSGPKKPLPDQVSV 176
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNV 145
VLGIKVKIMLP D TGK+GPKKPLPD V+V
Sbjct: 147 VLGIKVKIMLPHDPTGKSGPKKPLPDQVSV 176
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 948 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKV 1007
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK+GP+K LPD+V ++EPKEE P SQ
Sbjct: 1008 KIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQPLSQ 1046
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK+GP+K LPD+V ++EPKEE
Sbjct: 1002 VLGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 1037
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 74/90 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKFVDGLMIHSG P DYV+ A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRAARAKSMKFVDGLMIHSGQPAKDYVDYAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P+D G+ GP K LPD V +++PK E
Sbjct: 189 KIMRPFDPEGRMGPAKNLPDAVTMVDPKPE 218
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P+D G+ GP K LPD V +++PK E
Sbjct: 183 VLGIKVKIMRPFDPEGRMGPAKNLPDAVTMVDPKPE 218
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG+P Y++ A RHVLLRQGVLGIKV
Sbjct: 1493 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQGVLGIKV 1552
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 1553 KIMKDWDPTGKRGPRTPLPDVVKVLEPKEE 1582
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/36 (77%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 1547 VLGIKVKIMKDWDPTGKRGPRTPLPDVVKVLEPKEE 1582
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 72/87 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G+ GP+KPLPD+V +LEP
Sbjct: 187 KIMKGWDPEGQVGPRKPLPDSVQILEP 213
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+ GP+KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGWDPEGQVGPRKPLPDSVQILEP 213
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N++++ A RHVLLRQGVLGIKV
Sbjct: 133 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQGVLGIKV 192
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GKTGP PLPD V + PKEE
Sbjct: 193 KIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 222
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GKTGP PLPD V + PKEE
Sbjct: 187 VLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 222
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N++++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GKTGP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 216
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GKTGP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 216
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIML WD TGK+GPK PLPD V + PK++V + P+ P+ + E P+ +V
Sbjct: 187 KIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAA--APVTLVQEAPLTTV 240
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQK 159
VLGIKVKIML WD TGK+GPK PLPD V + PK++V + P +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQ 224
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 2/116 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF+DG M+ SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KIML WD TGK+GPK PLPD V + PK++V P+ + P+ + E P+ +V
Sbjct: 187 KIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVNLAPAQ--IAAPVTLVPEAPLTTV 240
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLGIKVKIML WD TGK+GPK PLPD V + PK++V
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDV 217
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 216
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 216
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 216
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 216
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 75/102 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLD 102
KIML WD GK GPK PLPD V + PKEE P D
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATD 228
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQK 159
VLGIKVKIML WD GK GPK PLPD V + PKEE P+K
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEK 224
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG P ND++++ATRHVLLRQGVLGIKV
Sbjct: 130 MESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDSATRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D GK GP+K LPD V +++PKEE P SQ
Sbjct: 190 KIMRGSDPEGKAGPQKTLPDAVTIIDPKEEQPVLQPMSQ 228
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D GK GP+K LPD V +++PKEE
Sbjct: 184 VLGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEE 219
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/67 (97%), Positives = 66/67 (98%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGIKV
Sbjct: 94 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKV 153
Query: 61 KIMLPWD 67
KIMLP+D
Sbjct: 154 KIMLPYD 160
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 70/87 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 457 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKV 516
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD TG GPKKPLPD V + EP
Sbjct: 517 KIMKGWDPTGNLGPKKPLPDTVTIQEP 543
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 25/33 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD TG GPKKPLPD V + EP
Sbjct: 511 VLGIKVKIMKGWDPTGNLGPKKPLPDTVTIQEP 543
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 83/113 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGK+RG RAKSMKF DG MIH+G P D+V+ A RHVL++QGVLG+KV
Sbjct: 128 MESGAKGCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGLKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPV 113
KIM WD G++G PLPD V +LEPKE+ T P S+ ++P+A P
Sbjct: 188 KIMHGWDPEGRSGRPFPLPDAVTILEPKEDEPITAPMSESRNQPVASAETAPA 240
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIM WD G++G PLPD V +LEPKE+
Sbjct: 182 VLGLKVKIMHGWDPEGRSGRPFPLPDAVTILEPKED 217
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 104 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 163
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 164 KIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 193
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 158 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 193
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIML WD GK GP PLPD V + PKEE P+ VL + EIPVA
Sbjct: 187 KIMLDWDPRGKLGPMTPLPDLVTIHSPKEEEEYNTPA--VLTANI----EIPVA 234
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPRGKLGPMTPLPDLVTIHSPKEE 216
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE--EVNPTIPSSQV 100
KIML WD GK GP PLPD V + PKE E+ P + +++V
Sbjct: 187 KIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRPPVLAAEV 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEE 216
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 8/111 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI 111
KIM +D G+ GP+KPLPD+V + EP P +++ +PL++ E+
Sbjct: 187 KIMKGYDREGQLGPRKPLPDSVQIFEP--------PVDKIISEPLSEQREL 229
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM +D G+ GP+KPLPD+V + EP
Sbjct: 181 VLGIKVKIMKGYDREGQLGPRKPLPDSVQIFEP 213
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG PC D+V+ A RHVLLRQGVLGIKV
Sbjct: 126 MESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D+ G+ G P KPLPD V V +PKEEV P+S+
Sbjct: 186 KIMRGSDTEGRNGAPAKPLPDLVTVFDPKEEVIVQQPTSE 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 116 VLGIKVKIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEV 152
VLGIKVKIM D+ G+ G P KPLPD V V +PKEEV
Sbjct: 180 VLGIKVKIMRGSDTEGRNGAPAKPLPDLVTVFDPKEEV 217
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 72/87 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G+ GP+KPLPD+V +LEP
Sbjct: 187 KIMKGWDPEGQLGPRKPLPDSVQILEP 213
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+ GP+KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPRKPLPDSVQILEP 213
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM DS G GP+KPLPD+V ++EP + + PSS+
Sbjct: 187 KIMKGSDSEGLVGPRKPLPDSVQIIEPPVDKIVSEPSSE 225
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM DS G GP+KPLPD+V ++EP
Sbjct: 181 VLGIKVKIMKGSDSEGLVGPRKPLPDSVQIIEP 213
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPTTPLPDLVTIHTPKEE 216
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 96 PSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
P ++ +DK + + + VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 163 PVNEYIDKAVRHV--LLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEE 216
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 77/90 (85%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV +SGKLR QRAK+MKF+DG MI +G P D+++ A RHVLLRQGVLGIKV
Sbjct: 130 MESGAKGCEVQISGKLRAQRAKTMKFMDGYMISTGQPKLDFIDRAVRHVLLRQGVLGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP D TG+ GP+KPLPD++ +LEPKEE
Sbjct: 190 KIMLPHDPTGRQGPRKPLPDSIVILEPKEE 219
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 115 SVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP D TG+ GP+KPLPD++ +LEPKEE
Sbjct: 183 GVLGIKVKIMLPHDPTGRQGPRKPLPDSIVILEPKEE 219
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 74/97 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG +IHSG P D+++ A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRAARAKSMKFSDGFLIHSGQPSVDFIDYAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM P D G+ GP PLPD V ++EPK E TI S
Sbjct: 189 KIMRPHDPEGRMGPAHPLPDQVTLIEPKPETEITIHS 225
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
VLGIKVKIM P D G+ GP PLPD V ++EPK E
Sbjct: 183 VLGIKVKIMRPHDPEGRMGPAHPLPDQVTLIEPKPETE 220
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPTTPLPDLVTIHTPKEE 216
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEE 216
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 72/87 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHV+LRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G+ GP+KPLPD+V +LEP
Sbjct: 61 KIMKGWDPEGQVGPRKPLPDSVQILEP 87
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+ GP+KPLPD+V +LEP
Sbjct: 55 VLGIKVKIMKGWDPEGQVGPRKPLPDSVQILEP 87
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 76/100 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF MI SG P DYV++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKQNYMISSGQPVKDYVDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQV 100
KIML WD GK GPK PLPD V + PK+E T P++ V
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKDEEEYTRPAAVV 226
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GPK PLPD V + PK+E
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKDE 216
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 75/104 (72%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG MIHSG P D+V+ A RHVL++QGVLGIKV
Sbjct: 128 MESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKP 104
KIM WD G+ G PLPD V +LEPKEE P S+ P
Sbjct: 188 KIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSESRQAP 231
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD G+ G PLPD V +LEPKEE
Sbjct: 182 VLGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEE 217
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 72/87 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG M+HSG P D+V+ A RHVLL+QGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMVHSGQPARDFVDYAYRHVLLKQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G+ GPKKPLPD+V +L+P
Sbjct: 187 KIMKGWDPEGQIGPKKPLPDSVQILDP 213
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+ GPKKPLPD+V +L+P
Sbjct: 181 VLGIKVKIMKGWDPEGQIGPKKPLPDSVQILDP 213
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 75/96 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML WD GK GP PLPD V + PK+E P P
Sbjct: 187 KIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPP 222
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 28/42 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GP PLPD V + PK+E P P
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPP 222
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG+P Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 187 KIMKEWDPTGKRGPRTPLPDVVKVLEPKEE 216
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEE 216
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 76/90 (84%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAK+MKF DG MI SG+P +Y++TA RHV +RQG++GIKV
Sbjct: 100 MESGAKGCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKV 159
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP D +GKTGPK PLPD + +LE KEE
Sbjct: 160 KIMLPHDPSGKTGPKAPLPDAITILEAKEE 189
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
++GIKVKIMLP D +GKTGPK PLPD + +LE KEE
Sbjct: 154 MIGIKVKIMLPHDPSGKTGPKAPLPDAITILEAKEE 189
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 7 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 66
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 67 KIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 96
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 61 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 96
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 8/107 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEV+VSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 136 MESEAKGCEVIVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKV 195
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAK 107
KIM WD G+ GP+KPLPD V ++EP P +++ +PL++
Sbjct: 196 KIMKAWDPEGRLGPRKPLPDTVTIIEP--------PIDKLITEPLSE 234
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+ GP+KPLPD V ++EP
Sbjct: 190 VLGIKVKIMKAWDPEGRLGPRKPLPDTVTIIEP 222
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAEGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE--EVNPTIPSSQV 100
KIML WD GK GP PLPD V + PKE E+ P + +++V
Sbjct: 187 KIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRPPVLAAEV 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEE 216
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 187 KIMKEWDPTGKRGPRTPLPDVVKVLEPKEE 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD TGK GP+ PLPD V VLEPKEE
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEE 216
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 74/99 (74%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG MIHSG P D+V+ A RHVL++QGVLGIKV
Sbjct: 128 MESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM WD G+ G PLPD V +LEPKEE P S+
Sbjct: 188 KIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSE 226
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD G+ G PLPD V +LEPKEE
Sbjct: 182 VLGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEE 217
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 216
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 144 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKV 203
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 204 KIMLDWDPKGKQGPTTPLPDLVTIHXPKEE 233
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 198 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHXPKEE 233
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 73/89 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV++SGKLR QRAKSMKF DG M+ SG+ Y+++A RHVLLRQGVLGIKV
Sbjct: 136 MESGAKGCEVIISGKLRAQRAKSMKFKDGYMVSSGNSSRTYIDSAVRHVLLRQGVLGIKV 195
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIM WD TG+ GPK PLPD V VL+PKE
Sbjct: 196 KIMKDWDPTGRRGPKTPLPDMVKVLDPKE 224
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 28/35 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
VLGIKVKIM WD TG+ GPK PLPD V VL+PKE
Sbjct: 190 VLGIKVKIMKDWDPTGRRGPKTPLPDMVKVLDPKE 224
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 81/115 (70%), Gaps = 10/115 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
KIML WD GK GP PLPD V + PK+E KPL EIPVA+
Sbjct: 189 KIMLDWDPKGKQGPMTPLPDLVTIHAPKDE--------DEFSKPLT--AEIPVAA 233
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PK+E
Sbjct: 183 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDE 218
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 79/105 (75%), Gaps = 5/105 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN-----PTIPSSQV 100
KIML WD GK GP PLPD V + PKEE + IP++++
Sbjct: 187 KIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEI 231
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 30/47 (63%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLP 162
VLGIKVKIML WD GK GP PLPD V + PKEE + P +P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIP 227
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 74/99 (74%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG MIHSG P D+V+ A RHVL++QGVLGIKV
Sbjct: 128 MESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM WD G+ G PLPD V +LEPKEE P S+
Sbjct: 188 KIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSE 226
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD G+ G PLPD V +LEPKEE
Sbjct: 182 VLGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEE 217
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG MI SG P NDY+++A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG MI SG P NDY+++A RHV+LRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PK+E
Sbjct: 187 KIMLDWDPKGKVGPITPLPDLVTIHTPKDE 216
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PK+E
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDE 216
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 78/96 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAK+MKF DG MI SG+P +Y++TA RHV +RQG++GIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLP D +GKTGPK PLPD + +LE KEE P P
Sbjct: 188 KIMLPHDPSGKTGPKAPLPDAITILEAKEEDIPDEP 223
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLP 162
++GIKVKIMLP D +GKTGPK PLPD + +LE KEE P P+ LP
Sbjct: 182 MIGIKVKIMLPHDPSGKTGPKAPLPDAITILEAKEEDIPDEPKPNLP 228
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+ A GCEVVVSGKLRGQRAKSMKFV+GLMIHSGDP N YV TA RHVLL+QGVLGIKV
Sbjct: 127 MEAEAMGCEVVVSGKLRGQRAKSMKFVEGLMIHSGDPTNHYVETAVRHVLLKQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEEVNPTIPSSQVLD--KPLAKL 108
KIM P D GK GP + LPD V+V++ P E+ N I S D KP A++
Sbjct: 187 KIMHPHDPLGKRGPAQLLPDKVHVVDSPHEDDNVEISSDNKQDTSKPTAEI 237
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLE-PKEEVN 153
VLGIKVKIM P D GK GP + LPD V+V++ P E+ N
Sbjct: 181 VLGIKVKIMHPHDPLGKRGPAQLLPDKVHVVDSPHEDDN 219
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/117 (62%), Positives = 82/117 (70%), Gaps = 12/117 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQVLDKPLAKLGEIPVA 114
KIML WD GK GP PLPD V + PKEE V P + ++ + EIPVA
Sbjct: 187 KIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVAPPVMTTNI---------EIPVA 234
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 216
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKG EV+VSGK++GQRAK+MKF DGLMIHSGDP N Y+ A RHVLL QG+LGIKV
Sbjct: 127 MESEAKGGEVIVSGKIKGQRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQGILGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIML D GKTG KK LPD++ + EPKEEV P P S+
Sbjct: 187 KIMLDHDPAGKTGCKKTLPDHLYISEPKEEVVPVKPYSE 225
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGIKVKIML D GKTG KK LPD++ + EPKEEV P P
Sbjct: 181 ILGIKVKIMLDHDPAGKTGCKKTLPDHLYISEPKEEVVPVKP 222
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
gi|413917293|gb|AFW57225.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
gi|413917294|gb|AFW57226.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 75/96 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML WD GK GP PLPD V + PK+E P P
Sbjct: 61 KIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPP 96
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 28/42 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GP PLPD V + PK+E P P
Sbjct: 55 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPP 96
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 189 KIMLDWDPKGKQGPTMPLPDLVTIHVPKEE 218
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 183 VLGIKVKIMLDWDPKGKQGPTMPLPDLVTIHVPKEE 218
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 216
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF G M+ SG P DY+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKHGDMLSSGQPVKDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GPK PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 216
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 30/47 (63%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLP 162
VLGIKVKIML WD GK GPK PLPD V + PKEE P LP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEVYNRPATILP 227
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 187 KIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 216
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 80/105 (76%), Gaps = 5/105 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLG+KV
Sbjct: 291 MESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFIDSATRHVLLRQGVLGVKV 350
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPL 105
KIML ++ +KPLPD+V V+EPK E PSS+ +PL
Sbjct: 351 KIML-----SESMTRKPLPDSVVVIEPKPEEQIGQPSSEDFSRPL 390
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 5/36 (13%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIML T +KPLPD+V V+EPK E
Sbjct: 345 VLGVKVKIMLSESMT-----RKPLPDSVVVIEPKPE 375
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 71/90 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF +G M+HSG P D+++ A RHVLLRQGVLGIKV
Sbjct: 129 MESGAKGCEVVVSGKLRAARAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P D G+ GP K LPD+V + EPK E
Sbjct: 189 KIMKPSDPAGRQGPAKNLPDDVQITEPKAE 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D G+ GP K LPD+V + EPK E
Sbjct: 183 VLGIKVKIMKPSDPAGRQGPAKNLPDDVQITEPKAE 218
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 71/90 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y++ A RHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PKEE
Sbjct: 188 KIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 217
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 182 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 217
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVV+SGKLR RAKSMKF +G MIHSG P D+V+ A RHV+LRQGVLGIKV
Sbjct: 127 MESNAKGCEVVISGKLRAARAKSMKFTEGFMIHSGQPARDFVDEAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM WD G+TGP+KPLPD V + EP
Sbjct: 187 KIMKGWDPNGETGPRKPLPDMVQITEP 213
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD G+TGP+KPLPD V + EP
Sbjct: 181 VLGIKVKIMKGWDPNGETGPRKPLPDMVQITEP 213
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 78/103 (75%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 137 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 196
Query: 61 KIML----PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P D +G+ K LPD+V ++EPKEE PSSQ
Sbjct: 197 KIMRASSSPNDPSGEKAGGKGLPDSVTIIEPKEEQPILAPSSQ 239
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 116 VLGIKVKIML----PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D +G+ K LPD+V ++EPKEE
Sbjct: 191 VLGIKVKIMRASSSPNDPSGEKAGGKGLPDSVTIIEPKEE 230
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 5/99 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ESGAKG EVVVSGKLRGQRAKSMKFVDG++IHS DPCN+Y +TATRH+LLRQG
Sbjct: 128 LESGAKGSEVVVSGKLRGQRAKSMKFVDGMVIHSRDPCNEYSDTATRHILLRQG-----G 182
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIMLPWD GK PK+PLP+NV V+EPK+E+ P ++
Sbjct: 183 KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTPGTK 221
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 122 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
KIMLPWD GK PK+PLP+NV V+EPK+E+ P K
Sbjct: 183 KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTPGTK 221
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 69/88 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC + VSGKLR QRAK+MKF+DG +IHSG P DY+ ATRH LRQGV+GIK+
Sbjct: 156 MESGAKGCIISVSGKLRAQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQGVIGIKI 215
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
IMLPWD G GPKKPLPD V VLE K
Sbjct: 216 SIMLPWDPAGVRGPKKPLPDVVTVLENK 243
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
V+GIK+ IMLPWD G GPKKPLPD V VLE K
Sbjct: 210 VIGIKISIMLPWDPAGVRGPKKPLPDVVTVLENK 243
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 77/103 (74%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLGIKV
Sbjct: 137 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 196
Query: 61 KIML----PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P D G+ K LPD+V ++EPKEE PSSQ
Sbjct: 197 KIMRASSSPNDPAGEKAGGKGLPDSVTIIEPKEEQPILAPSSQ 239
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 116 VLGIKVKIML----PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D G+ K LPD+V ++EPKEE
Sbjct: 191 VLGIKVKIMRASSSPNDPAGEKAGGKGLPDSVTIIEPKEE 230
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG MIHSG P D+V+ A RHVLL+QGVLG+KV
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPVRDFVDFAVRHVLLKQGVLGLKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P D G+ G KPLPD+V ++EPKEE
Sbjct: 190 KIMRPHDPEGRAGFPKPLPDSVVIVEPKEE 219
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIM P D G+ G KPLPD+V ++EPKEE
Sbjct: 184 VLGLKVKIMRPHDPEGRAGFPKPLPDSVVIVEPKEE 219
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 71/97 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAK MKF DG MI G P DY++ A RHVLLRQGV GIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQGVFGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIML WD GK GPK PLPD V + PKEE P+
Sbjct: 187 KIMLDWDPKGKQGPKTPLPDFVTIHFPKEEEEYIRPA 223
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPA 155
V GIKVKIML WD GK GPK PLPD V + PKEE + PA
Sbjct: 181 VFGIKVKIMLDWDPKGKQGPKTPLPDFVTIHFPKEEEEYIRPA 223
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 73/96 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML WD GK GP PLPD V + PKE+ P
Sbjct: 187 KIMLDWDPKGKVGPMTPLPDLVTIHPPKEDEEYVAP 222
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASL 168
VLGIKVKIML WD GK GP PLPD V + PKE+ P P TA++
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEDEEYVAP----PVMTANI 229
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 77/103 (74%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 187
Query: 61 KIML----PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P D +G+ K LPD+V ++EPKEE PSSQ
Sbjct: 188 KIMRASSSPGDPSGEKAGGKGLPDSVTIIEPKEEQPILAPSSQ 230
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 116 VLGIKVKIML----PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D +G+ K LPD+V ++EPKEE
Sbjct: 182 VLGIKVKIMRASSSPGDPSGEKAGGKGLPDSVTIIEPKEE 221
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 79/99 (79%), Gaps = 5/99 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG +IHSG P ND+++TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDTATRHVLLRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSS 98
KIM P S +TGP K LPD V ++EPKEE P + +S
Sbjct: 187 KIMRDPAQS--RTGP-KALPDAVKIVEPKEE-EPILAAS 221
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 14/58 (24%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE----------VNPAFPQKKLP 162
VLGIKVKIM P S +TGPK LPD V ++EPKEE PA PQ++ P
Sbjct: 181 VLGIKVKIMRDPAQS--RTGPK-ALPDAVKIVEPKEEEPILAASVKDYRPAAPQQEEP 235
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 76/103 (73%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGIKV 187
Query: 61 KIM----LPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P D G+ K LPD+V ++EPKEE PSSQ
Sbjct: 188 KIMRASSTPGDPAGEKSGGKGLPDSVTIIEPKEEQPILAPSSQ 230
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 116 VLGIKVKIM----LPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D G+ K LPD+V ++EPKEE
Sbjct: 182 VLGIKVKIMRASSTPGDPAGEKSGGKGLPDSVTIIEPKEE 221
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y++ A RHVLLRQGVLGIKV
Sbjct: 173 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDGAVRHVLLRQGVLGIKV 232
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQV 100
KIML WD GK GP PLPD V + PK+E + P P + V
Sbjct: 233 KIMLDWDPKGKQGPATPLPDLVTIHPPKDEDEFLRPLAPQTAV 275
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPAFPQ 158
VLGIKVKIML WD GK GP PLPD V + PK+E + P PQ
Sbjct: 227 VLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDEDEFLRPLAPQ 272
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 126 MESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGIKV 185
Query: 61 KIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D+ G+ G P KPLPD V + EPKEEV +P S+
Sbjct: 186 KIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEVIVQMPVSE 225
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 116 VLGIKVKIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEV 152
VLGIKVKIM D+ G+ G P KPLPD V + EPKEEV
Sbjct: 180 VLGIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEV 217
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHVLLRQGVLGIKV
Sbjct: 202 MESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGIKV 261
Query: 61 KIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM D+ G+ G P KPLPD V + EPKEEV +P S+
Sbjct: 262 KIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEVIVQMPVSE 301
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 116 VLGIKVKIMLPWDSTGKTG-PKKPLPDNVNVLEPKEEV 152
VLGIKVKIM D+ G+ G P KPLPD V + EPKEEV
Sbjct: 256 VLGIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEV 293
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 74/89 (83%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI +G P D+V+ A R+V+++QGVLG++V
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP+D GKTGP KPLPD V V EPKE
Sbjct: 188 KIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
VLG++VKIMLP+D GKTGP KPLPD V V EPKE
Sbjct: 182 VLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 71/87 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKGCEVVVSGKLR RAKSMKF DG MIHSG P D+V+ A RHV+LRQGVLGIKV
Sbjct: 127 MESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFVDYAVRHVMLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM D G++GP+KPLPD+V +LEP
Sbjct: 187 KIMKGTDPDGQSGPRKPLPDSVQILEP 213
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM D G++GP+KPLPD+V +LEP
Sbjct: 181 VLGIKVKIMKGTDPDGQSGPRKPLPDSVQILEP 213
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 74/89 (83%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI +G P D+V+ A R+V+++QGVLG++V
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP+D GKTGP KPLPD V V EPKE
Sbjct: 188 KIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
VLG++VKIMLP+D GKTGP KPLPD V V EPKE
Sbjct: 182 VLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 77/98 (78%), Gaps = 4/98 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM P S +TGP K LPD V ++EPKEE PS
Sbjct: 187 KIMRDPAKS--RTGP-KALPDAVTIIEPKEEEQILTPS 221
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S +TGPK LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPAKS--RTGPK-ALPDAVTIIEPKEE 214
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
K+ML WD G +GPK PLPD V + PKEE
Sbjct: 187 KVMLDWDPKGISGPKTPLPDVVIIHSPKEE 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+ML WD G +GPK PLPD V + PKEE
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEE 216
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 78/99 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEV+VSGKLR QRAKSMKF +G M+ +G+ +YV+TA RHVL+RQGVLG+KV
Sbjct: 127 MEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGVKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
IMLP D TGK GPK+ L D V +LEPKE++ P+ Q
Sbjct: 187 SIMLPHDPTGKQGPKRNLDDVVTILEPKEDIPLVYPAPQ 225
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLG+KV IMLP D TGK GPK+ L D V +LEPKE++ +P
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRNLDDVVTILEPKEDIPLVYP 222
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 77/98 (78%), Gaps = 4/98 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM P S +TGP K LPD V ++EPKEE PS
Sbjct: 187 KIMRDPAKS--RTGP-KALPDAVTIIEPKEEEQILAPS 221
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S +TGPK LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPAKS--RTGPK-ALPDAVTIIEPKEE 214
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 73/96 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GAKG EV+VSGKLR QRAKSMKF DG MI SG +YV+ A RHVL+RQGVLG+KV
Sbjct: 127 MEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIMLP D GK GPK L D VNVLEPKEE+ +P
Sbjct: 187 KIMLPHDPAGKIGPKAKLSDVVNVLEPKEEIELPVP 222
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQ 158
VLG+KVKIMLP D GK GPK L D VNVLEPKEE+ P+
Sbjct: 181 VLGVKVKIMLPHDPAGKIGPKAKLSDVVNVLEPKEEIELPVPE 223
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EVVVSGKLR QRAK+MKF DG MI +G +YV++A RHVL+RQGVLG+KV
Sbjct: 126 MESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IMLP D++GKTGPK L D V +LEPKEE
Sbjct: 186 SIMLPHDASGKTGPKNTLADVVTILEPKEE 215
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KV IMLP D++GKTGPK L D V +LEPKEE
Sbjct: 180 VLGVKVSIMLPHDASGKTGPKNTLADVVTILEPKEE 215
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI G P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTIPSSQVLDKPLA 106
KIML WD GK GP PLPD ++ PK+E + P + + L+ P+A
Sbjct: 187 KIMLDWDPKGKQGPATPLPDLASIHTPKDEEEYMRPPLTMAPELEVPVA 235
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD ++ PK+E
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLASIHTPKDE 216
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEVV+SGKLR RAKSMKF DG MIHSG P D++++ATRHVLLRQGVLG+KV
Sbjct: 129 MEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPL 105
KIMLP KT KK LPD V VL+PKEE T P + V+++P+
Sbjct: 189 KIMLPEP---KTRQKKSLPDIVVVLDPKEEEPITKPYT-VINQPV 229
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIMLP KT KK LPD V VL+PKEE
Sbjct: 183 VLGVKVKIMLPEP---KTRQKKSLPDIVVVLDPKEE 215
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 71/90 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
K+ML WD GK GP PLPD V + PKEE
Sbjct: 187 KVMLDWDPKGKLGPMTPLPDVVIIHSPKEE 216
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVK+ML WD GK GP PLPD V + PKEE
Sbjct: 181 VLGIKVKVMLDWDPKGKLGPMTPLPDVVIIHSPKEE 216
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 78/98 (79%), Gaps = 5/98 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG +IHSG P ND+++TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTI 95
KIM S +TGP K LPD V +LEPK+E V P++
Sbjct: 187 KIM-KDPSKSRTGP-KALPDAVKILEPKDEDAVVEPSV 222
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM S +TGPK LPD V +LEPK+E
Sbjct: 181 VLGIKVKIM-KDPSKSRTGPK-ALPDAVKILEPKDE 214
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEVV+SGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLG+KV
Sbjct: 128 MEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGVLGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPL 105
KIMLP KT KK LPD V VL+PKEE T P + V+++P+
Sbjct: 188 KIMLPEP---KTRQKKSLPDAVVVLDPKEEAPITEPYT-VVNQPV 228
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIMLP KT KK LPD V VL+PKEE
Sbjct: 182 VLGVKVKIMLPEP---KTRQKKSLPDAVVVLDPKEE 214
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 9/121 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++ ATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE-------VNPTIPSSQVLDKPLAKLGEIPV 113
KIM +T GP K LPD V ++EPK+E VN P++Q ++ A+ E PV
Sbjct: 187 KIMRD-PATNTKGP-KALPDAVTIVEPKDEEPVLVASVNDYRPAAQETEQAPAQSEEAPV 244
Query: 114 A 114
A
Sbjct: 245 A 245
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++V+ A RHVLL+QGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM D G+ GPKKPLPD V + EP
Sbjct: 187 KIMKGHDPEGQLGPKKPLPDAVQIYEP 213
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM D G+ GPKKPLPD V + EP
Sbjct: 181 VLGIKVKIMKGHDPEGQLGPKKPLPDAVQIYEP 213
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEVVVSGKLRGQR K+MKF DG MI SG+P +Y+ ++ RHVLLRQG +GIKV
Sbjct: 127 MENGAKGCEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQGCVGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD G+TGPK P+PD V + PK+E
Sbjct: 187 KIMLDWDPKGRTGPKTPVPDVVTIHNPKDE 216
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
+GIKVKIML WD G+TGPK P+PD V + PK+E
Sbjct: 182 VGIKVKIMLDWDPKGRTGPKTPVPDVVTIHNPKDE 216
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 70/88 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G P +YVNTA R V LRQGVLGIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIMLP+D G+ GP LPD V VL+PK
Sbjct: 188 KIMLPYDPEGRLGPSTLLPDTVTVLDPK 215
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P S +TGP K LPD V ++EPKEE
Sbjct: 187 KIMRDPAKS--RTGP-KALPDAVTIIEPKEE 214
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S +TGPK LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPAKS--RTGPK-ALPDAVTIIEPKEE 214
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 70/88 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G P +YVNTA R V LRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIMLP+D G+ GP LPD V VL+PK
Sbjct: 189 KIMLPYDPEGRLGPSTLLPDTVTVLDPK 216
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P S +TGP K LPD V ++EPKEE
Sbjct: 187 KIMRDPAKS--RTGP-KALPDAVTIIEPKEE 214
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S +TGPK LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPAKS--RTGPK-ALPDAVTIIEPKEE 214
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P S +TGP K LPD V ++EPKEE
Sbjct: 187 KIMRDPAKS--RTGP-KALPDAVTIVEPKEE 214
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S +TGPK LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPAKS--RTGPK-ALPDAVTIVEPKEE 214
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 72/89 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG MI +G P DYV+ A R+VL++QGVLG++V
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQGVLGVQV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP+D GK GP PLPD + V EPKE
Sbjct: 188 KIMLPYDPEGKVGPSNPLPDAIMVREPKE 216
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
VLG++VKIMLP+D GK GP PLPD + V EPKE
Sbjct: 182 VLGVQVKIMLPYDPEGKVGPSNPLPDAIMVREPKE 216
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFSDGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM +T KTGP + LPD V ++EPK+E
Sbjct: 187 KIMRD-PATAKTGP-RALPDAVTIVEPKDE 214
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM +T KTGP+ LPD V ++EPK+E
Sbjct: 181 VLGIKVKIMRD-PATAKTGPR-ALPDAVTIVEPKDE 214
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLG+KV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
KIML WD GK GP PLPD V + PKE+ + I +QV+ P A + E P+ +
Sbjct: 187 KIMLDWDPKGKLGPMTPLPDVVIIHTPKED-DVYIAPAQVV-APTALVPEAPLTT 239
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIML WD GK GP PLPD V + PKE+
Sbjct: 181 VLGLKVKIMLDWDPKGKLGPMTPLPDVVIIHTPKED 216
>gi|432092120|gb|ELK24807.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 133
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 77/99 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GA GCEVVVSGKL+GQRA S+K VDGLMI SGDP N YV+TA H L R+G LGIKV
Sbjct: 1 MERGADGCEVVVSGKLQGQRAASVKVVDGLMIRSGDPVNCYVDTAVHHGLPRRGGLGIKV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KI LPWD GK GPKKP PD V+ +EPK+E+ P+ P S+
Sbjct: 61 KITLPWDPGGKRGPKKPPPDCVSTVEPKDEILPSTPISE 99
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 111 IPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+P LGIKVKI LPWD GK GPKKP PD V+ +EPK+E+ P+ P
Sbjct: 50 LPRRGGLGIKVKITLPWDPGGKRGPKKPPPDCVSTVEPKDEILPSTP 96
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 70/88 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC + VSGK++GQRAK+MKF+DG +IHSG P DYV ATRH L+QG++G+K+
Sbjct: 127 MESGAKGCLISVSGKIKGQRAKTMKFIDGYIIHSGQPVEDYVEKATRHCFLKQGMIGVKI 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
IMLPWD G GPKKPLPD V VLE +
Sbjct: 187 SIMLPWDPVGTIGPKKPLPDVVTVLENR 214
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
++G+K+ IMLPWD G GPKKPLPD V VLE +
Sbjct: 181 MIGVKISIMLPWDPVGTIGPKKPLPDVVTVLENR 214
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P D+++ ATRHVLLRQGVLGIKV
Sbjct: 138 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFIDHATRHVLLRQGVLGIKV 197
Query: 61 KIML----PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KIM P D G+ K LPD+V ++EPKEE P S+
Sbjct: 198 KIMRASSSPSDPAGEKAGGKGLPDSVTIIEPKEEQPIMAPRSE 240
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 116 VLGIKVKIML----PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P D G+ K LPD+V ++EPKEE
Sbjct: 192 VLGIKVKIMRASSSPSDPAGEKAGGKGLPDSVTIIEPKEE 231
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 69/88 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G P YVNTA R V LRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQQYVNTAVRSVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIMLP+D G+ GP LPD V VL+PK
Sbjct: 189 KIMLPYDPEGRIGPSTLLPDTVTVLDPK 216
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCEV+VSGKLR QRAK+MKF DG MI SG P NDY+++A RHVLLRQGVLGIKV
Sbjct: 127 MENGAKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNDYIDSAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IM D TGK+GPK +PD V V PK+E
Sbjct: 187 RIMKNHDPTGKSGPKATMPDVVVVHAPKDE 216
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKV+IM D TGK+GPK +PD V V PK+E
Sbjct: 181 VLGIKVRIMKNHDPTGKSGPKATMPDVVVVHAPKDE 216
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG +IHSG P ND++ TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM D + T K LPD V ++EPKEE
Sbjct: 187 KIM--KDPSRNTSGPKALPDAVTIIEPKEE 214
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM D + T K LPD V ++EPKEE
Sbjct: 181 VLGIKVKIM--KDPSRNTSGPKALPDAVTIIEPKEE 214
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLG+KV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDK 103
KIML WD GK GP PLPD V + PKE+ + I +QV+ +
Sbjct: 187 KIMLDWDPKGKQGPMTPLPDVVIIHTPKED-DVYIAPAQVVTQ 228
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIML WD GK GP PLPD V + PKE+
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKED 216
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLG+KV
Sbjct: 127 MESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDK 103
KIML WD GK GP PLPD V + PKE+ + I +QV+ +
Sbjct: 187 KIMLDWDPKGKQGPMTPLPDVVIIHTPKED-DVYIAPAQVVTQ 228
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLG+KVKIML WD GK GP PLPD V + PKE+
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKED 216
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 4/98 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++ ATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGIKV 186
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM P S K GP + LPD V ++EPKEE +PS
Sbjct: 187 KIMRDPARS--KVGP-RALPDAVTIVEPKEEEKILVPS 221
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 4/37 (10%)
Query: 116 VLGIKVKIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM P S K GP+ LPD V ++EPKEE
Sbjct: 181 VLGIKVKIMRDPARS--KVGPR-ALPDAVTIVEPKEE 214
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 9/119 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG +IHSG P D+++TATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE-------VNPTIPSSQVLDKPLAKLGEIP 112
KIM + + GP K LPD V +LEPKEE V P+ Q + P A+ + P
Sbjct: 187 KIMRD-PARNRVGP-KALPDAVKILEPKEEEYVESPSVKDYRPAPQAQEAPEAQEAQAP 243
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM + + GPK LPD V +LEPKEE
Sbjct: 181 VLGIKVKIMRD-PARNRVGPK-ALPDAVKILEPKEE 214
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAK MKF DG MI SG P N Y++ A RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD GK GP PLPD V + PK++
Sbjct: 187 KIMLDWDPKGKQGPATPLPDLVTIHPPKDD 216
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PK++
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDD 216
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 135 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 194
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP + LPD V ++EPKEE PS
Sbjct: 195 KIMRD-PARARFGP-RSLPDAVKIVEPKEEETIVAPS 229
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 71 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 130
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM + +TGP K LPD V ++EPKEE
Sbjct: 131 KIMRD-PAKSRTGP-KALPDAVTIIEPKEE 158
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM + +TGPK LPD V ++EPKEE
Sbjct: 125 VLGIKVKIMRD-PAKSRTGPK-ALPDAVTIIEPKEE 158
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P D+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVKDFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM +T KTGP + LPD V ++EPK+E
Sbjct: 187 KIMRD-PATAKTGP-RALPDAVTIVEPKDE 214
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM +T KTGP+ LPD V ++EPK+E
Sbjct: 181 VLGIKVKIMRD-PATAKTGPR-ALPDAVTIVEPKDE 214
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 76/96 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV+VSGKLRGQRAK+MKF DG MI SG+P +Y+ ++TRHVLLRQGV+GIKV
Sbjct: 132 MENGAKGAEVIVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSSTRHVLLRQGVVGIKV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML D G+ GPK P+PD + + EPKE+ N P
Sbjct: 192 KIMLDHDPKGRMGPKTPIPDTIIIKEPKEDENMAKP 227
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
V+GIKVKIML D G+ GPK P+PD + + EPKE+ N A P
Sbjct: 186 VVGIKVKIMLDHDPKGRMGPKTPIPDTIIIKEPKEDENMAKP 227
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG MIHSG P ++V+ A RHVLL+QGVLGIKV
Sbjct: 535 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQGVLGIKV 594
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM D G+ GPKKPLPD V + EP
Sbjct: 595 KIMKGHDPEGQLGPKKPLPDAVQIYEP 621
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM D G+ GPKKPLPD V + EP
Sbjct: 589 VLGIKVKIMKGHDPEGQLGPKKPLPDAVQIYEP 621
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 75/92 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG +V+VSGKLR QRAK+MKF +G M+ +G+ +YV+TA RHVL+RQGVLG+KV
Sbjct: 127 MEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQGVLGVKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
IMLP D TGK GPK+ L D V +LEPKEEV+
Sbjct: 187 SIMLPHDPTGKQGPKRALDDVVTILEPKEEVH 218
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 30/38 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
VLG+KV IMLP D TGK GPK+ L D V +LEPKEEV+
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEVH 218
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG +V+VSGKLR QRAK+MKF +G M+ +G+ +YV+TA RHVL+RQGVLG+KV
Sbjct: 127 MEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQGVLGVKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
IMLP D TGK GPK+ L D V +LEPKEEV
Sbjct: 187 SIMLPHDPTGKQGPKRALDDVVTILEPKEEV 217
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 29/37 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLG+KV IMLP D TGK GPK+ L D V +LEPKEEV
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEV 217
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 73/91 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCE+++SGKLR QRAKSMKF DG +I +G+P Y+N+ATR V LRQGVLG+KV
Sbjct: 128 MESGANGCEIIISGKLRAQRAKSMKFKDGYLISTGEPSKQYINSATRSVQLRQGVLGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLP D GK GPK +PD++ VLEPK E+
Sbjct: 188 KIMLPHDPEGKRGPKAIIPDSITVLEPKPEL 218
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF DG +IHSG P ND+++TATRHVLLRQGVLGIKV
Sbjct: 211 MESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQGVLGIKV 270
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM S +TGP LPD V ++EPK+E
Sbjct: 271 KIM-KDPSKARTGP-TALPDAVEIIEPKDE 298
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAK+MK+ DG +IHSG P ND+++ ATRHVL+RQGVLGI++
Sbjct: 127 MESGAKGCEVVISGKLRAARAKAMKYADGFLIHSGQPVNDFIDVATRHVLMRQGVLGIRI 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM S K GP + LPD VN++EPKEE + S
Sbjct: 187 KIMRD-PSKSKVGP-RALPDAVNIVEPKEEEKILVAS 221
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGI++KIM S K GP+ LPD VN++EPKEE
Sbjct: 181 VLGIRIKIMRD-PSKSKVGPR-ALPDAVNIVEPKEE 214
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG +IHSG P ND+++ ATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDIATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM S K GP LPD V+++EPK+E T P+
Sbjct: 187 KIMRD-PSRNKVGP-TALPDAVSIVEPKDEERVTQPT 221
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 74/91 (81%), Gaps = 4/91 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 23 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 82
Query: 61 KIML-PWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P S +TG K LPD V ++EPKEE
Sbjct: 83 KIMRDPAKS--RTG-XKALPDAVTIIEPKEE 110
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 78/98 (79%), Gaps = 5/98 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++ ATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE---VNPTI 95
KIM +T + GP + LPD V+++EPK+E + PT+
Sbjct: 187 KIMRD-PATNRGGP-RALPDAVSIVEPKDEEPVLTPTV 222
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GAKG EVVVSGKLR RAKSMKF DG MIHSG P ND+++TATRHVLLRQGVLG+KV
Sbjct: 129 MDAGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQGVLGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM ++ K G K LPD V + EPKE+
Sbjct: 189 KIMRDPATSKKPGVPKSLPDAVTIFEPKED 218
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKK 160
VLG+KVKIM ++ K G K LPD V + EPKE+ A P K
Sbjct: 183 VLGVKVKIMRDPATSKKPGVPKSLPDAVTIFEPKEDAVVAEPMVK 227
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EVVVSGKLRGQR K+MKF DG MI SG+P +Y+ +A HVLLRQG +G+KV
Sbjct: 128 MENGAKGAEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQGCVGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIML WD G+TGPK P+PD V + PK+E
Sbjct: 188 KIMLDWDPKGRTGPKTPIPDTVTIHNPKDE 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
+G+KVKIML WD G+TGPK P+PD V + PK+E
Sbjct: 183 VGVKVKIMLDWDPKGRTGPKTPIPDTVTIHNPKDE 217
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 8/114 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ------- 53
+ESGAKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVLLRQ
Sbjct: 71 LESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLLRQASSIFCG 130
Query: 54 -GVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLA 106
GVLGIKVKIML WD+ GK P PLPD V + PKEE N S L+ P+A
Sbjct: 131 YGVLGIKVKIMLAWDAKGKQRPVTPLPDLVTIHTPKEEENVPPIMSTSLELPIA 184
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 27/38 (71%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
VLGIKVKIML WD+ GK P PLPD V + PKEE N
Sbjct: 133 VLGIKVKIMLAWDAKGKQRPVTPLPDLVTIHTPKEEEN 170
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 68/88 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G P YV+TA R V LRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQAYVSTAVRSVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P D G+ GP LPDN+ VLEPK
Sbjct: 189 KIMHPHDPDGRIGPTMILPDNITVLEPK 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
VLGIKVKIM P D G+ GP LPDN+ VLEPK
Sbjct: 183 VLGIKVKIMHPHDPDGRIGPTMILPDNITVLEPK 216
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 73/99 (73%), Gaps = 20/99 (20%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KI+ ++EPK+E+ PT P S+
Sbjct: 187 KII--------------------IVEPKDEILPTTPISE 205
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +VNTATR L+QGVLGIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP KTG LPDN++VLEPK E
Sbjct: 188 KIMLPTAVDSKTGLPSILPDNISVLEPKTE 217
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 65/75 (86%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKV
Sbjct: 129 MESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKV 188
Query: 61 KIMLPWDSTGKTGPK 75
KIMLP+D G+ GPK
Sbjct: 189 KIMLPYDPRGQNGPK 203
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EV+V+GKLR QRAK+MKF DG MI SG DYV+ A RHV++RQGVLG+ V
Sbjct: 123 MESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTV 182
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
IMLP D TGK GPK PL D + +L PKEE+
Sbjct: 183 SIMLPHDPTGKEGPKTPLSDVITILPPKEEI 213
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLG+ V IMLP D TGK GPK PL D + +L PKEE+
Sbjct: 177 VLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 213
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/65 (92%), Positives = 61/65 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV VSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 63 MESGAKGCEVFVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 122
Query: 61 KIMLP 65
KIMLP
Sbjct: 123 KIMLP 127
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF DG +IHSG P D+++TATRHVL+RQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM +T +GP LPD V +++PKEE
Sbjct: 187 KIMRD-PATTPSGP-NALPDAVTIVDPKEE 214
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +VNTATR L+QGVLGIKV
Sbjct: 128 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP +TG LPDN++VLEPK +
Sbjct: 188 KIMLPTAIDTRTGLTSILPDNISVLEPKTD 217
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V+ A R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLP D GK GP PLPD + V++PK E+
Sbjct: 189 KIMLPHDPEGKRGPATPLPDTIIVMDPKPEI 219
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLG++VKIMLP D GK GP PLPD + V++PK E+
Sbjct: 183 VLGVRVKIMLPHDPEGKRGPATPLPDTIIVMDPKPEI 219
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGAKG EVVVSGKLR RAKSMKF DG MIHSG P D++ TATRHVLLRQGVLGIKV
Sbjct: 128 MDSGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM + +TGP K LPD V + EPK+E
Sbjct: 188 KIMRD-PAAARTGP-KALPDFVKIHEPKDE 215
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V+ A R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLP D GK GP PLPD + V++PK E+
Sbjct: 189 KIMLPHDPEGKRGPANPLPDTIIVMDPKPEI 219
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VLG++VKIMLP D GK GP PLPD + V++PK E+
Sbjct: 183 VLGVRVKIMLPHDPEGKRGPANPLPDTIIVMDPKPEI 219
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V+ A R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLGVRV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
IMLP+D GK GP PLPD + V EPK E+
Sbjct: 189 SIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 219
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +VNTATR L+QGVLGIKV
Sbjct: 124 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP KTG LPDN++VLEPK +
Sbjct: 184 KIMLPTAIDTKTGLPSILPDNISVLEPKTD 213
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 69/93 (74%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+ AKGCEV+VSGKLRGQRAK MKF DG MI +G Y + A RHVL+RQGV+GIKV
Sbjct: 131 MEASAKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVIGIKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
IMLP D G GPK PL D V +LEPKEE +P
Sbjct: 191 AIMLPHDPKGVQGPKIPLDDVVTILEPKEEPSP 223
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 154
V+GIKV IMLP D G GPK PL D V +LEPKEE +P
Sbjct: 185 VIGIKVAIMLPHDPKGVQGPKIPLDDVVTILEPKEEPSP 223
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 73/97 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G EV+VSGK R QRAKSMKF G +I +G P +++ ATRHV+++QGVLGI++
Sbjct: 128 MESGALGVEVIVSGKARVQRAKSMKFKSGFLITTGRPAQVFIDKATRHVMMKQGVLGIRL 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIMLP D GK GPK P PD V +L+PKE+ P +P+
Sbjct: 188 KIMLPHDPEGKNGPKTPFPDTVTILDPKEDKPPVVPT 224
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQK 159
VLGI++KIMLP D GK GPK P PD V +L+PKE+ P P K
Sbjct: 182 VLGIRLKIMLPHDPEGKNGPKTPFPDTVTILDPKEDKPPVVPTK 225
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +VNTATR L+QGVLGIKV
Sbjct: 17 MESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKV 76
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP +TG LPDN++VLEPK +
Sbjct: 77 KIMLPTAIDTRTGLTSILPDNISVLEPKTD 106
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 68/86 (79%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGC + +SGKLR QRAKSMKF +G +IHSG +Y++++TRH +L+QGV+GIK+
Sbjct: 124 MESGAKGCLITISGKLRAQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQGVIGIKI 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
IMLPWD GK GP PLPD V +L+
Sbjct: 184 SIMLPWDPYGKKGPVNPLPDMVTILK 209
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLE 147
V+GIK+ IMLPWD GK GP PLPD V +L+
Sbjct: 178 VIGIKISIMLPWDPYGKKGPVNPLPDMVTILK 209
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +VNTATR L+QGVLGIKV
Sbjct: 126 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIMLP +TG LPDN++VLEPK +
Sbjct: 186 KIMLPTAIDTRTGLPSILPDNISVLEPKTD 215
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 70/92 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+ AKGCEVVV+GKLRGQRAK MKF DG MI +G Y ++A RHVL+RQGV+GIKV
Sbjct: 123 MEAQAKGCEVVVTGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQGVIGIKV 182
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
IMLP D G+ GPK PL D V +LEPKEE N
Sbjct: 183 SIMLPQDPKGQMGPKIPLDDVVTILEPKEEPN 214
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
V+GIKV IMLP D G+ GPK PL D V +LEPKEE N
Sbjct: 177 VIGIKVSIMLPQDPKGQMGPKIPLDDVVTILEPKEEPN 214
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG +V++A RH +R G +G+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 186 KIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 114 ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
A +G+KVKIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 178 AGCIGVKVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG +V++A RH +R G +G+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 186 KIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 114 ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
A +G+KVKIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 178 AGCIGVKVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG +V++A RH +R G +G+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 186 KIMLPSDSTGRNGPSEPLPDVITVIEPKQ 214
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 114 ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
A +G+KVKIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 178 AGCIGVKVKIMLPSDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V+ A R V LRQGVLG++V
Sbjct: 149 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 208
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KIMLP D GK GP PLPD + V++PK E+
Sbjct: 209 KIMLPHDPEGKRGPANPLPDTIIVMDPKPEI 239
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 71/96 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH LLRQG +G++V
Sbjct: 42 MESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRHALLRQGTIGMRV 101
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML D G+ GP P+PD V + PKE+ + P
Sbjct: 102 KIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+G++VKIML D G+ GP P+PD V + PKE+ + A P
Sbjct: 97 IGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 73/90 (81%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+E+GAKGCEV+VSGKLR QRA +MKF +G MI +G+ C ++V+ ATRHVL++QG+LG+KV
Sbjct: 128 LEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGNACKEFVDEATRHVLVKQGMLGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IM P D G+ GPKK LPD + V EPKE+
Sbjct: 188 RIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAF 156
+LG+KV+IM P D G+ GPKK LPD + V EPKE+ PA+
Sbjct: 182 MLGVKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQPLPAW 222
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG +V++A RH +R G +G+KV
Sbjct: 249 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKV 308
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 309 KIMLPGDSTGRNGPSEPLPDVITVIEPKQ 337
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 114 ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
A +G+KVKIMLP DSTG+ GP +PLPD + V+EPK+
Sbjct: 301 AGCIGVKVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 337
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EVV+SGKLR RAK+MKF DG +IHSG P D+++TATRHVLLRQGVLG+KV
Sbjct: 127 MESGAKGVEVVISGKLRAARAKAMKFQDGFLIHSGQPVKDFIDTATRHVLLRQGVLGVKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM +T + GP K LPD V V EPKE+
Sbjct: 187 KIMRD-PATNRVGP-KSLPDYVKVHEPKED 214
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 80/139 (57%), Gaps = 39/139 (28%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR-------- 52
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLR
Sbjct: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVCFATIA 186
Query: 53 -----------------------------QGVLGIKVKIMLPWDSTGKTGPKKPLPDNVN 83
QGVLGIKVKIML WD GK GP PLPD V
Sbjct: 187 RCNVCLSLGKHFIFDVPNVISQQTSFSVVQGVLGIKVKIMLDWDPKGKVGPITPLPDLVT 246
Query: 84 VLEPKE--EVNPTIPSSQV 100
+ PKE E+ P + +++V
Sbjct: 247 IHTPKEEDELRPPVLAAEV 265
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 72/90 (80%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+E+GAKGCEV+VSGKLR QRA +MKF +G MI +G C ++V+ ATRHVL++QG+LG+KV
Sbjct: 128 LEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQGMLGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IM P D G+ GPKK LPD + V EPKE+
Sbjct: 188 RIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAF----PQKKLPFKTA 166
+LG+KV+IM P D G+ GPKK LPD + V EPKE+ PA+ P++ P + A
Sbjct: 182 MLGVKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQPLPAWKPNQPKEAAPVEEA 236
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/60 (95%), Positives = 58/60 (96%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP NDYV+TA RHVLLRQGVLGIKV
Sbjct: 128 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKV 187
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/62 (93%), Positives = 59/62 (95%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 62 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 121
Query: 61 KI 62
KI
Sbjct: 122 KI 123
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG EVV+SGK +G RAKSMKF DG MIHSG P ND+++ ATRHVLLRQGVLGIKV
Sbjct: 127 MESGAKGVEVVISGKSKGARAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQGVLGIKV 186
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM +T + GP K LPD+V V +PKE+
Sbjct: 187 KIM-KDPATNRRGP-KALPDSVVVYDPKED 214
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ GAKGCEV++SGKL+ QRAK+MKF G MI +G P DYV+ A RHV +QG++G+KV
Sbjct: 130 INDGAKGCEVIISGKLQQQRAKTMKFKQGYMICTGQPRKDYVDVAVRHVFFKQGIMGVKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
KIMLP+D TGK G + P+PDNV + EPK + N
Sbjct: 190 KIMLPYDPTGKFGVRTPIPDNVVINEPKRDDN 221
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
++G+KVKIMLP+D TGK G + P+PDNV + EPK + N
Sbjct: 184 IMGVKVKIMLPYDPTGKFGVRTPIPDNVVINEPKRDDN 221
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Query: 1 MESGA-KGCEV-VVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESG GCEV VSGKLR QRAKSMK DG MI SG P +DYV+ A RHVLLRQGVLGI
Sbjct: 128 MESGTPTGCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLLRQGVLGI 187
Query: 59 KVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KVKIML WD GK GP PLPD V + PKEE
Sbjct: 188 KVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 219
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 184 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 219
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKV
Sbjct: 84 MDSGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 143
Query: 61 KIMLPWDSTGKTG 73
KIML WD GK G
Sbjct: 144 KIMLDWDPKGKQG 156
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 11/113 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVV+SGKLR RAKSMKF D D+V+ A RHVL++QGVLGIKV
Sbjct: 128 MESGAKGCEVVISGKLRAARAKSMKFTD-----------DFVDEAVRHVLMKQGVLGIKV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPV 113
KIM WD G+ G PLPD V +LEPKEE + P S+ + P GE+ +
Sbjct: 177 KIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPISAPVSESRNAPAETGGEVSI 229
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIM WD G+ G PLPD V +LEPKEE
Sbjct: 171 VLGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEE 206
>gi|344256720|gb|EGW12824.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 94
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 65/76 (85%)
Query: 24 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVN 83
MKFVDGLMIH GDP N YV+TA RHVLLRQGVLGIKVK+MLPWD +GK GPKKPLPD+V+
Sbjct: 1 MKFVDGLMIHCGDPVNYYVDTAMRHVLLRQGVLGIKVKVMLPWDPSGKIGPKKPLPDHVS 60
Query: 84 VLEPKEEVNPTIPSSQ 99
+EPK+E+ P P S+
Sbjct: 61 TVEPKDEILPNTPISE 76
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVK+MLPWD +GK GPKKPLPD+V+ +EPK+E+ P P
Sbjct: 32 VLGIKVKVMLPWDPSGKIGPKKPLPDHVSTVEPKDEILPNTP 73
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 71/96 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EVVVSGKLRGQRAK+MKF DG MI SG+P +Y+ + TRH LLRQG +G++V
Sbjct: 128 MEAGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQGTIGMRV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KIML D G+ GP P+PD V + PK++ + P
Sbjct: 188 KIMLDHDPKGRNGPSTPIPDTVVIHTPKDDEDMAKP 223
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+G++VKIML D G+ GP P+PD V + PK++ + A P
Sbjct: 183 IGMRVKIMLDHDPKGRNGPSTPIPDTVVIHTPKDDEDMAKP 223
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 65/87 (74%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKLR QRAKSMKF DG +I +G P +V +ATR V LRQGVLGIKV
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
KIM P D G+ GP +PD + V EP
Sbjct: 189 KIMHPHDPEGRLGPSTVMPDTITVKEP 215
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM P D G+ GP +PD + V EP
Sbjct: 183 VLGIKVKIMHPHDPEGRLGPSTVMPDTITVKEP 215
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+E+GAKGC + VSGKLR QRAK+MKF+DG +IHSG P +Y +A RH LL QGV+GIK+
Sbjct: 128 IEAGAKGCIISVSGKLRAQRAKTMKFMDGYIIHSGKPSEEYTKSAIRHCLLPQGVIGIKI 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
IMLPWD G GPKKPLPD + +++ +
Sbjct: 188 SIMLPWDPCGLIGPKKPLPDVITLVQNR 215
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
V+GIK+ IMLPWD G GPKKPLPD + +++ +
Sbjct: 182 VIGIKISIMLPWDPCGLIGPKKPLPDVITLVQNR 215
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGAKG V+VSGKLR QRAKSMKF +G MI +G P DYV+ A RHV ++QGVLGIKV
Sbjct: 129 MDSGAKGGAVIVSGKLRAQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVLGIKV 188
Query: 61 KIMLPWDSTGKTGP-KKPLPDNVNVLEPKEEVN-PTIP 96
K+MLPW + G +KP PD V+V EPKE+++ PT+
Sbjct: 189 KVMLPWVVGTQAGSNQKPQPDVVSVHEPKEDLSVPTVA 226
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 69/87 (79%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
SGA+GC+++VSGKL+GQRAKS+KF DG++IHSG+P DY++T V +QGV+GI+V+I
Sbjct: 139 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQGVIGIQVRI 198
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPKE 89
MLP+D G GP PLPD + +LEP E
Sbjct: 199 MLPYDPEGVLGPSYPLPDRITILEPNE 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GI+V+IMLP+D G GP PLPD + +LEP E
Sbjct: 191 VIGIQVRIMLPYDPEGVLGPSYPLPDRITILEPNE 225
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 7/99 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MES AKG EVVVSGKLRGQRAKSM FVDG+MIHS DPC + LRQG LGI+V
Sbjct: 84 MESCAKGYEVVVSGKLRGQRAKSMTFVDGMMIHSDDPCKEATP-------LRQGELGIQV 136
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KI+LPWD G GPK+ L DNV ++EPK+E+ P S+
Sbjct: 137 KIVLPWDPNGNIGPKELLSDNVEMVEPKDEIMYNTPRSE 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
LGI+VKI+LPWD G GPK+ L DNV ++EPK+E+
Sbjct: 132 LGIQVKIVLPWDPNGNIGPKELLSDNVEMVEPKDEI 167
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+V+SGKLR RAK+MKF DG MI SGD N YV+ A +H+ L+QGVLGIKV
Sbjct: 128 MENGAKGVEIVISGKLRAARAKAMKFRDGYMIKSGDAVNHYVDYAVKHIQLKQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKK-PLPDNVNVLEPKEEVNPTIP 96
KIM+P+D TGK G D V V EPKEE ++P
Sbjct: 188 KIMMPYDPTGKEGGSTVKQSDVVTVTEPKEETALSVP 224
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKK-PLPDNVNVLEPKEEVNPAFPQK 159
VLGIKVKIM+P+D TGK G D V V EPKEE + P K
Sbjct: 182 VLGIKVKIMMPYDPTGKEGGSTVKQSDVVTVTEPKEETALSVPPK 226
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 68/87 (78%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
SGA+GC+++VSGKL+GQRAKS+KF DG++IHSG+ DY+NT V +QGV+GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVKDYINTGYATVETKQGVIGIQVRI 187
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPKE 89
MLP+D G GP PLPD + +LEP E
Sbjct: 188 MLPYDPEGVIGPNYPLPDRITILEPTE 214
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GI+V+IMLP+D G GP PLPD + +LEP E
Sbjct: 180 VIGIQVRIMLPYDPEGVIGPNYPLPDRITILEPTE 214
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 64/89 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKGCEV+VSGKLR QRAKSMKF DG MI SG P +V+ A RHVLLRQG LG+KV
Sbjct: 131 MTKGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTLGVKV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IMLP D TGK G P PD V + +P E
Sbjct: 191 AIMLPHDPTGKNGCTIPQPDIVIIKDPVE 219
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 96 PSSQVLDKPLAKLGEIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
PS Q +D + + + LG+KV IMLP D TGK G P PD V + +P E
Sbjct: 167 PSQQFVDFAVRHV--LLRQGTLGVKVAIMLPHDPTGKNGCTIPQPDIVIIKDPVE 219
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 56/59 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIK 59
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIK
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 185
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQG+LGI+V
Sbjct: 132 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILGIRV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM+ +D GK+GPK LPD++ + EPKE+
Sbjct: 192 KIMMAYDPEGKSGPKTRLPDDITIHEPKED 221
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGI+VKIM+ +D GK+GPK LPD++ + EPKE + FP
Sbjct: 186 ILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE--DTVFP 225
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQG+LGI+V
Sbjct: 132 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILGIRV 191
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM+ +D GK+GPK LPD++ + EPKE+
Sbjct: 192 KIMMAYDPEGKSGPKTRLPDDITIHEPKED 221
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGI+VKIM+ +D GK+GPK LPD++ + EPKE + FP
Sbjct: 186 ILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE--DTVFP 225
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E GA+G EV+VSGK +GQRA+S KF+DGLMIHSG P DYV T V +RQGV+GIKVK
Sbjct: 134 EEGAQGIEVIVSGKTKGQRARSTKFIDGLMIHSGQPAKDYVKTGFTAVEMRQGVIGIKVK 193
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IMLP+D G GP K + D V V EPK+
Sbjct: 194 IMLPYDPEGIIGPNKVMADKVIVFEPKD 221
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAF 156
V+GIKVKIMLP+D G GP K + D V V EPK+ F
Sbjct: 187 VIGIKVKIMLPYDPEGIIGPNKVMADKVIVFEPKDSEVATF 227
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 5 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIML 64
A+GC+++VSGKL+GQRAKS+KF DG++IHSGD DY+NT V +QGV+GI+V+IML
Sbjct: 130 AQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIML 189
Query: 65 PWDSTGKTGPKKPLPDNVNVLEPKE 89
P+D G GP PLPD + +LEP E
Sbjct: 190 PYDPEGVLGPNYPLPDRITILEPSE 214
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GI+V+IMLP+D G GP PLPD + +LEP E
Sbjct: 180 VIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 214
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 5 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIML 64
A+GC+++VSGKL+GQRAKS+KF DG++IHSGD DY+NT V +QGV+GI+V+IML
Sbjct: 142 AQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIML 201
Query: 65 PWDSTGKTGPKKPLPDNVNVLEPKE 89
P+D G GP PLPD + +LEP E
Sbjct: 202 PYDPEGVLGPNYPLPDRITILEPSE 226
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GI+V+IMLP+D G GP PLPD + +LEP E
Sbjct: 192 VIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 57/63 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 126 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 185
Query: 61 KIM 63
KIM
Sbjct: 186 KIM 188
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
SGA+GC+++VSGKL+GQRAKS+KF DG++IHSG+ NDY+NT V +QG++GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVNDYINTGYATVETKQGIIGIQVRI 187
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPKE 89
MLP D G GP LPD + +LEP E
Sbjct: 188 MLPHDPEGVIGPSYALPDRITILEPSE 214
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
++GI+V+IMLP D G GP LPD + +LEP E
Sbjct: 180 IIGIQVRIMLPHDPEGVIGPSYALPDRITILEPSE 214
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 57/63 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAK+MKF DG +IHSG P ND+++TATRHVL+RQGVLGIKV
Sbjct: 122 MESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKV 181
Query: 61 KIM 63
KIM
Sbjct: 182 KIM 184
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQG+LGI+V
Sbjct: 28 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILGIRV 87
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM+ +D GK+GPK LPD++ + EPKE+
Sbjct: 88 KIMMAYDPEGKSGPKTRLPDDITIHEPKED 117
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGI+VKIM+ +D GK+GPK LPD++ + EPKE+ FP
Sbjct: 82 ILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDT--VFP 121
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%)
Query: 20 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLP 79
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLP D +GK GPKKPLP
Sbjct: 19 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPKDPSGKIGPKKPLP 78
Query: 80 DNVNVLEPK 88
D+V +L P+
Sbjct: 79 DHVALLSPR 87
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV--NPAFPQKK 160
VLGIKVKIMLP D +GK GPKKPLPD+V +L P+ + P F ++
Sbjct: 54 VLGIKVKIMLPKDPSGKIGPKKPLPDHVALLSPRMRLCRQPPFLSRR 100
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQG+LGI+V
Sbjct: 117 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILGIRV 176
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE-VNPTIPSSQVLDKPLA 106
KIM+ +D GK+GPK LPD++ + EPKE+ V P ++ + P+A
Sbjct: 177 KIMMAYDPEGKSGPKTRLPDDITIHEPKEDTVFPIEATTTEEEAPVA 223
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
+LGI+VKIM+ +D GK+GPK LPD++ + EPKE+ FP
Sbjct: 171 ILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDT--VFP 210
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV+VSGKL QRAKSMKF DG +I SG P DY++ A RHV LRQGVLGIKV
Sbjct: 122 MESGAKGCEVIVSGKLCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK--EEVNPTIPSSQVLDKPLAK 107
KIM WD GK PLPD V + K ++V+ T+ + P+ K
Sbjct: 181 KIMFNWDPKGKQSLTTPLPDLVTIHPNKQDQQVHYTMQQYHPMTIPILK 229
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNV 145
VLGIKVKIM WD GK PLPD V +
Sbjct: 175 VLGIKVKIMFNWDPKGKQSLTTPLPDLVTI 204
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKGCEV+VSGKLR QRAK+MKF DG MI SG P + V+ A HVLLRQG LG+KV
Sbjct: 133 MTKGAKGCEVIVSGKLRAQRAKAMKFTDGYMIKSGQPSQNMVDFACCHVLLRQGTLGVKV 192
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP 87
IMLP+D TGK G + P PD V + +P
Sbjct: 193 AIMLPYDPTGKNGVQTPQPDIVVIKDP 219
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
LG+KV IMLP+D TGK G + P PD V + +P
Sbjct: 188 LGVKVAIMLPYDPTGKNGVQTPQPDIVVIKDP 219
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+ AKGCEV+VSGKLRGQRAK+MKF DG MI +G Y +TA RHV +RQG++GIKV
Sbjct: 130 MEASAKGCEVIVSGKLRGQRAKAMKFGDGYMIKTGHAGQVYTDTAVRHVAMRQGMIGIKV 189
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVL 85
IMLP D G+ GPK PL D V +L
Sbjct: 190 SIMLPHDPKGQIGPKIPLDDVVTIL 214
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVL 146
++GIKV IMLP D G+ GPK PL D V +L
Sbjct: 184 MIGIKVSIMLPHDPKGQIGPKIPLDDVVTIL 214
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ND+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM +T K GP + LPD V + E K+E + IP+
Sbjct: 188 KIM-KDPATNKFGP-RALPDAVKIAEAKDE-DEIIPA 221
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKGCEV+VSGKLR QRAKSMKF DG MI SG P D+V+ A RHVLLRQG LG+KV
Sbjct: 130 MTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQGTLGVKV 189
Query: 61 KIMLPWDSTGKT--GPKKPLPDNV 82
IMLP+D +GK K P PD V
Sbjct: 190 AIMLPYDESGKIHGACKIPQPDIV 213
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV+++GK +G RAK+MKF DG MIH+G P D+++ A RHVL+RQGVLG+KV
Sbjct: 128 MEAGAKGVEVIIAGKAKGARAKAMKFADGFMIHTGQPAKDFIDVACRHVLMRQGVLGLKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIML +T + GPK LPD V V EPKE
Sbjct: 188 KIMLD-PATSQRGPKX-LPDAVIVHEPKE 214
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ND+++ A RHVL+RQGVLGI+V
Sbjct: 128 MAAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQGVLGIRV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM +T + GP K LPD V + E K+E + +P+
Sbjct: 188 KIM-KDPATARVGP-KALPDAVLISEAKDE-DEVVPA 221
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPARDFIDLAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP K LPDNV + E K+E + IP+
Sbjct: 188 KIM-KDPAASRVGP-KALPDNVVISEAKDE-DEIIPA 221
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPAKDFIDLAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP K LPDNV + E K+E + IP+
Sbjct: 188 KIM-KDPAASRIGP-KALPDNVVISEAKDE-DEIIPA 221
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ++++TA RHVL+RQGVLGI+V
Sbjct: 131 MAAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQGVLGIRV 190
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + K GP K LPD V + E KEE + ++P+
Sbjct: 191 KIMRD-PAKNKFGP-KALPDAVMIAEYKEE-DESVPA 224
>gi|307006559|gb|ADN23564.1| 40S ribosomal protein S3 [Hyalomma marginatum rufipes]
Length = 91
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 58/65 (89%)
Query: 26 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVL 85
FVDGLMIHSG+P NDYV TA RHVLLRQGVLGIKVKIMLP D GK GPK+PLPD+V+++
Sbjct: 1 FVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPCDPNGKLGPKRPLPDHVSIM 60
Query: 86 EPKEE 90
EPK+E
Sbjct: 61 EPKKE 65
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIMLP D GK GPK+PLPD+V+++EPK+E
Sbjct: 30 VLGIKVKIMLPCDPNGKLGPKRPLPDHVSIMEPKKE 65
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLRG RAK+ K+ DG MIHSG P D+++ A RHVL+RQGVLGI+V
Sbjct: 128 MNNGAKGVEVVISGKLRGARAKAQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGIRV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK--EEVNPT 94
KIM +T K GP K LPD V V E K EEV P
Sbjct: 188 KIM-KDPATNKFGP-KALPDAVKVAEAKDDEEVIPA 221
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ND+++ A RHVL+RQGVLG+KV
Sbjct: 129 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM ++ + GP + LPD V + E K+E + IP+
Sbjct: 189 KIMKDPEAN-RFGP-RALPDAVKIAEAKDE-DEVIPA 222
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ND+++ A RHVL+RQGVLG+KV
Sbjct: 129 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP + LPD V + E K+E + IP+
Sbjct: 189 KIM-KDPAANRFGP-RALPDAVKIAEAKDE-DEVIPA 222
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKGCEV+VSGKLR QRAKSMKF DG MI SG P D+++ A RHVLLRQG LG+KV
Sbjct: 130 MTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKV 189
Query: 61 KIMLPWDSTGKT--GPKKPLPDNV 82
IMLP+D T K P PD V
Sbjct: 190 AIMLPYDETRKIHGACNIPQPDVV 213
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP K LPD V + E K+E + IP+
Sbjct: 188 KIM-KDPAANRFGP-KALPDAVKIAEAKDE-DEVIPA 221
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
++ GAKGCE+++SGKL+ QRAK+MKF G MI +G P NDY++ A RHV +QG++G+KV
Sbjct: 130 IQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKV 189
Query: 61 KIMLPWD--STGKTGPKKPLPDNVNVLEPKE 89
KIMLP++ K G K P+PDNV + PK+
Sbjct: 190 KIMLPYEPNPAKKFGVKTPIPDNVIIHPPKQ 220
Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 116 VLGIKVKIMLPWDS--TGKTGPKKPLPDNVNVLEPKE 150
++G+KVKIMLP++ K G K P+PDNV + PK+
Sbjct: 184 IMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPKQ 220
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM +T K GP K LPD V + E K++ + IP+
Sbjct: 188 KIM-KDPATNKFGP-KSLPDAVKISEAKDD-DEIIPA 221
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP K LPD V + E K+E + IP+
Sbjct: 188 KIM-KDPAANRFGP-KALPDAVKIAEAKDE-DEVIPA 221
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
KIM + + GP K LPD V + E K+E + IP+ V E PVA
Sbjct: 188 KIM-KDPAANRFGP-KSLPDAVKISEAKDE-DEVIPAPTVKSYKAQPEAEAPVA 238
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P ND+++ A RHVL+RQGVLG+KV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGVKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP + LPD V + E K+E + +P+
Sbjct: 188 KIM-KDPAQNRFGP-RALPDAVKIAEAKDE-DEVVPA 221
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG EVV+SGKLR RAKS K+ DG MIHSG P D+++ A RHVL+RQGVLGIKV
Sbjct: 128 MGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
KIM + + GP + LPD V + E K+E + IP+
Sbjct: 188 KIM-KDPAANRFGP-RALPDAVKIAEAKDE-DEVIPA 221
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 56/69 (81%), Gaps = 10/69 (14%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 71 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV----- 125
Query: 61 KIMLPWDST 69
WD++
Sbjct: 126 -----WDTS 129
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/54 (92%), Positives = 51/54 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 54
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEVV+SGKLRGQRA+ M F +G +I SG+ + +A R VLLR G++GIKV
Sbjct: 141 MESGALGCEVVISGKLRGQRAQHMIFKEGYLIKSGNATRQFYASAIRCVLLRMGIIGIKV 200
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
IML D TGKTGP +PD + + PK+EV+
Sbjct: 201 NIMLNTDPTGKTGPAARIPDVIEIKTPKDEVS 232
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 153
++GIKV IML D TGKTGP +PD + + PK+EV+
Sbjct: 195 IIGIKVNIMLNTDPTGKTGPAARIPDVIEIKTPKDEVS 232
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/55 (92%), Positives = 52/55 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 55
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 181
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/54 (92%), Positives = 51/54 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 54
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 81 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 134
>gi|350427367|ref|XP_003494734.1| PREDICTED: 40S ribosomal protein S3-like, partial [Bombus
impatiens]
Length = 80
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 61/66 (92%)
Query: 35 GDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
G+P N+YVNTATRHVLLRQGVLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+
Sbjct: 1 GEPTNEYVNTATRHVLLRQGVLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPS 60
Query: 95 IPSSQV 100
P+S+V
Sbjct: 61 QPTSEV 66
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKL 161
VLGIKVKIMLP+D GKTGPKKPLPD+V+++EPK+EV P+ P ++
Sbjct: 21 VLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEV 66
>gi|149068839|gb|EDM18391.1| rCG40478, isoform CRA_a [Rattus norvegicus]
Length = 55
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/54 (92%), Positives = 51/54 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 54
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV +SGKLRGQRA+ M F +G MI SG+ + ++A R VLLR G++GIKV
Sbjct: 147 MESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMGIIGIKV 206
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IML D +GK GP +PD V + PK+E
Sbjct: 207 TIMLDTDPSGKNGPAARIPDVVEIKTPKDE 236
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
++GIKV IML D +GK GP +PD V + PK+E
Sbjct: 201 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 236
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV +SGKLRGQRA+ M F +G MI SG+ + ++A R VLLR G++GIKV
Sbjct: 141 MESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMGIIGIKV 200
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IML D +GK GP +PD V + PK+E
Sbjct: 201 TIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
++GIKV IML D +GK GP +PD V + PK+E
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 56/71 (78%)
Query: 18 GQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKP 77
QRAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGIKVKIML WD TGK GPK P
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTP 60
Query: 78 LPDNVNVLEPK 88
LPDNV + PK
Sbjct: 61 LPDNVVIHMPK 71
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 27/34 (79%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
VLGIKVKIML WD TGK GPK PLPDNV + PK
Sbjct: 38 VLGIKVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 66/88 (75%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
+ GA+GC +++SGKL+GQRAKS+K+ GLMIH+G+ +V A VLL+QGV+GIKVK
Sbjct: 128 DGGAQGCVIIISGKLKGQRAKSVKYQQGLMIHTGNDRKLFVKEAISTVLLKQGVIGIKVK 187
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IMLP+D TG GP + + D + + EPK+
Sbjct: 188 IMLPYDPTGINGPSREICDKITIFEPKQ 215
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GIKVKIMLP+D TG GP + + D + + EPK+
Sbjct: 181 VIGIKVKIMLPYDPTGINGPSREICDKITIFEPKQ 215
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 50/53 (94%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 53
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGAKGCEV +SGKLRGQRA+ M F +G MI SG+ + ++A R VLLR G++GIKV
Sbjct: 141 MDSGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMGIIGIKV 200
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IML D +GK GP +PD V + PK+E
Sbjct: 201 TIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
++GIKV IML D +GK GP +PD V + PK+E
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG ++V+ ATRH LR G LG+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP + ++ LPD + VLEPKE
Sbjct: 186 KIMLPKSMQNE---EEILPDVITVLEPKE 211
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG ++V+ ATRH LR G LG+KV
Sbjct: 165 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKV 224
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP + ++ LPD + VLEPKE
Sbjct: 225 KIMLPKSMQDE---EEILPDVITVLEPKE 250
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG ++V+ ATRH LR G LG+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KIMLP + ++ LPD + VLEPKE
Sbjct: 186 KIMLPKSMQDE---EEILPDVITVLEPKE 211
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV V GK++GQRAKSM F DG MI SG +V+TATRH LR G +G+KV
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVSTATRHCHLRAGTIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIMLP + LPD V V+EPK
Sbjct: 186 KIMLP---NSMVEEDEVLPDVVTVIEPK 210
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 5 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIML 64
KGCE+V+SGKLRGQRAKSMKFVD LMI SGDP N Y++ A + +KVKIML
Sbjct: 97 GKGCEMVMSGKLRGQRAKSMKFVDVLMIQSGDPLNHYIDIAVHSS--NRVCWELKVKIML 154
Query: 65 PWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
WD K GPK LPD V++++PK+E+ P P
Sbjct: 155 LWDPNSKIGPKNSLPDLVSIVKPKDEILPATP 186
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 IKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQK-----KLPFKTASLYLAGM 173
+KVKIML WD K GPK LPD V++++PK+E+ PA P + + + AS + A
Sbjct: 148 LKVKIMLLWDPNSKIGPKNSLPDLVSIVKPKDEILPATPFQSRRDGRWSYTPASAHCATG 207
Query: 174 LIAIW 178
W
Sbjct: 208 FYDTW 212
>gi|379994267|gb|AFD22760.1| 40S ribosomal protein S3, partial [Collodictyon triciliatum]
Length = 100
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 12 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGK 71
VSGKLR QRAK MKF DG MI SG+P YV++A RHV++RQGVLG++V IMLPWD TG+
Sbjct: 4 VSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVRHVMMRQGVLGVRVSIMLPWDPTGR 63
Query: 72 TGPKKPLPDNVNVLEPK 88
G K P D + + +PK
Sbjct: 64 NGVKIPQADVITIRDPK 80
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
VLG++V IMLPWD TG+ G K P D + + +PK
Sbjct: 47 VLGVRVSIMLPWDPTGRNGVKIPQADVITIRDPK 80
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Query: 21 AKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPD 80
AKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKVKIML WD GK GP PLPD
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPD 60
Query: 81 NVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
V + PK+E KPL EIPVA+
Sbjct: 61 LVTIHAPKDE--------DEFSKPLT--AEIPVAA 85
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PK+E
Sbjct: 35 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDE 70
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 26 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVL 85
FVDG++ HS DP N++ +TA+RHVLLR G LG++VKIMLPWD G GPK+ L DNV ++
Sbjct: 82 FVDGIIFHSDDPSNEFSDTASRHVLLRHGELGMQVKIMLPWDKNGNIGPKEQLSDNVEMV 141
Query: 86 EPKEEVNPTIPSSQVLDKPLA-KLG 109
EPK+++ P S+ +KP A KLG
Sbjct: 142 EPKDKIMYNTPRSEPKNKPSALKLG 166
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASLYL-AGMLI 175
LG++VKIMLPWD G GPK+ L DNV ++EPK+++ P+ + K ++L L AG +
Sbjct: 112 LGMQVKIMLPWDKNGNIGPKEQLSDNVEMVEPKDKIMYNTPRSEPKNKPSALKLGAGRTV 171
Query: 176 AI 177
+
Sbjct: 172 EV 173
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV + GK++GQRAKSM F DG MI SG +V+ A RH LR G +G+KV
Sbjct: 126 MESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P T ++ LPD V V+EPK
Sbjct: 186 KIMRP---TSMLEEEEVLPDVVTVIEPK 210
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV + GK++GQRAKSM F DG MI SG +V+ A RH LR G +G+KV
Sbjct: 126 MESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGVKV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P T ++ LPD V V+EPK
Sbjct: 186 KIMRP---TSMLEEEEVLPDVVTVIEPK 210
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/44 (97%), Positives = 43/44 (97%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 44
MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV T
Sbjct: 129 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVET 172
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV + GK++GQRAKSM F DG MI SG +V+TATRH LR G +G+ V
Sbjct: 178 MESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNV 237
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P + + LPD + V+EPK
Sbjct: 238 KIMRPQSMIEE---DEVLPDVITVIEPK 262
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV + GK++GQRAKSM F DG MI SG +V+TATRH LR G +G+ V
Sbjct: 126 MESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNV 185
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P + + LPD + V+EPK
Sbjct: 186 KIMRPQSMIEE---DEVLPDVITVIEPK 210
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEV + GK++GQRAKSM F DG MI SG +V+TATRH LR G +G+ V
Sbjct: 178 MESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNV 237
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KIM P + + LPD + V+EPK
Sbjct: 238 KIMRPQSMIEE---DEVLPDVITVIEPK 262
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 57/89 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GA G EV++SGKL+GQRA+S K V G+M HSGD DYV +LL+QG+LGIKV
Sbjct: 136 MEGGAAGVEVIISGKLKGQRARSYKVVGGIMKHSGDSIKDYVKKGMSSILLKQGILGIKV 195
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
I L D TGK G P +V + +E
Sbjct: 196 AITLKHDPTGKIGTAVQHPSSVTIFSQEE 224
>gi|222064015|emb|CAQ86670.1| putative ribosomal protein S3 [Histomonas meleagridis]
Length = 89
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GCEVV+SGK+R RA +MKF +G M+ SGD YV A H+ ++Q V+GI+V
Sbjct: 1 MDAGARGCEVVISGKMRSARAAAMKFREGYMVKSGDVSQKYVLKAVGHIPMKQAVVGIRV 60
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IML D G TGP++P PD + V E K+
Sbjct: 61 LIMLAHDPQGITGPREPQPDVIKVHEAKD 89
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 105 LAKLGEIPV-ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
L +G IP+ +V+GI+V IML D G TGP++P PD + V E K+
Sbjct: 43 LKAVGHIPMKQAVVGIRVLIMLAHDPQGITGPREPQPDVIKVHEAKD 89
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
++G +G + VSGK++GQRAK+ KF+DGL+I +G P +Y+ A L +QGV+GI++
Sbjct: 126 QAGGQGVCIRVSGKIKGQRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQIS 185
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPK 88
IMLP+DS G GP + + D + V+ PK
Sbjct: 186 IMLPYDSEGIRGPSELIADKIKVISPK 212
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPK 149
V+GI++ IMLP+DS G GP + + D + V+ PK
Sbjct: 179 VIGIQISIMLPYDSEGIRGPSELIADKIKVISPK 212
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 56/78 (71%)
Query: 14 GKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTG 73
GKLR QRAKSMKF DG +I +G+P +VNTATR L QGVLGIKVKIMLP KTG
Sbjct: 1 GKLRAQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQGVLGIKVKIMLPSAIDTKTG 60
Query: 74 PKKPLPDNVNVLEPKEEV 91
LPDN++VLEPK +
Sbjct: 61 LPSILPDNISVLEPKTDT 78
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
gi|413917295|gb|AFW57227.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 53/73 (72%)
Query: 24 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVN 83
MKF DG MI SG P N+Y+++A RHVLLRQGVLGIKVKIML WD GK GP PLPD V
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVT 60
Query: 84 VLEPKEEVNPTIP 96
+ PK+E P P
Sbjct: 61 IHTPKDEDEPRPP 73
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 28/42 (66%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VLGIKVKIML WD GK GP PLPD V + PK+E P P
Sbjct: 32 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPP 73
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 4 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM 63
GAKGCE+++SGK+RGQRAKS K+ G +I +G P ++V+ A RHV LRQGVLG+KVKI
Sbjct: 141 GAKGCEIIISGKIRGQRAKSQKYKQGYIISTGQPKLEFVDEAVRHVELRQGVLGVKVKI- 199
Query: 64 LPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
LP +K +PD V + EPK++ + P+
Sbjct: 200 LPDTERAVGKYRKIMPDYVKIHEPKDDHHDITPT 233
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GA G EV++SGKL+GQRA+S K +G++ HSG+ DYV +LL+QG+LGIKV
Sbjct: 136 MEGGASGAEVIISGKLKGQRARSYKVSEGILKHSGNSTKDYVKKGMSSILLKQGILGIKV 195
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
I L +D TGK G P NV + +E
Sbjct: 196 GITLKYDPTGKVGTPVQHPSNVTIFSQEE 224
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 50/67 (74%)
Query: 24 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVN 83
+KF DG MI SG P N+Y++ A RHVLLRQGVLGIKVKIML WD GK GP PLPD V
Sbjct: 2 VKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVT 61
Query: 84 VLEPKEE 90
+ PKEE
Sbjct: 62 IHPPKEE 68
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 33 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 68
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GCEV +SGKLRG RA + K+ +G M+ SGD +V A H+ ++Q +GI+V
Sbjct: 128 MDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRV 187
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IML D +G +GPK+ PD + V E K+
Sbjct: 188 LIMLAQDPSGISGPKESQPDVIKVHEAKD 216
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 108 LGEIPV-ASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
+G IP+ + +GI+V IML D +G +GPK+ PD + V E K+
Sbjct: 173 VGHIPMKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQG+LGI+V
Sbjct: 132 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILGIRV 191
Query: 61 KIMLPWD 67
KIM+ +D
Sbjct: 192 KIMMAYD 198
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 53
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQ
Sbjct: 129 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ 181
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
+GA GC + +SGKL+G RA + KF++G++I SG P DYV T V +QGV+G++V I
Sbjct: 128 AGATGCLITISGKLKGLRACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQGVIGVQVSI 187
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPKE 89
MLP D G GP LPD + VL+ KE
Sbjct: 188 MLPHDPEGIIGPSTLLPDKIVVLDAKE 214
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+G++V IMLP D G GP LPD + VL+ KE
Sbjct: 180 VIGVQVSIMLPHDPEGIIGPSTLLPDKIVVLDAKE 214
>gi|388501238|gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%)
Query: 31 MIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
MI SG P DY+++A RHVLLRQGVLGIKVKIML WD GK GPK PLPD V + PKEE
Sbjct: 1 MISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 60
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GPK PLPD V + PKEE
Sbjct: 25 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 60
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GA+GC ++VSGKL+GQRA+S K + I+SG P +Y+ V L+QGV+GI VK
Sbjct: 127 EAGAQGCIIIVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMREGKSTVHLKQGVIGIIVK 186
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
IMLP D G GP++ + D + VL+ KE
Sbjct: 187 IMLPHDPEGIRGPRREMVDKIRVLDVKE 214
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
+GA GC V +SGKL+G RA + KF++G++I SG P DYV V +QGV+GI+V I
Sbjct: 128 AGATGCLVTISGKLKGLRACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQGVIGIQVSI 187
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPKE 89
MLP D G GP LPD + VL+ KE
Sbjct: 188 MLPHDPEGILGPSTLLPDKIVVLDAKE 214
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKE 150
V+GI+V IMLP D G GP LPD + VL+ KE
Sbjct: 180 VIGIQVSIMLPHDPEGILGPSTLLPDKIVVLDAKE 214
>gi|432096999|gb|ELK27498.1| 40S ribosomal protein S3-B [Myotis davidii]
Length = 106
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 31 MIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
MI SGDP N +TA RHVL R+GV G+KVKI LPWD +GK GP +P PD+V+++EPK+E
Sbjct: 1 MIRSGDPVNYDADTAVRHVLPRRGVRGLKVKITLPWDPSGKRGPTRPPPDHVSIVEPKDE 60
Query: 91 VNPTIPS 97
PT PS
Sbjct: 61 RPPTAPS 67
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 111 IPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQK 159
+P V G+KVKI LPWD +GK GP +P PD+V+++EPK+E P P +
Sbjct: 20 LPRRGVRGLKVKITLPWDPSGKRGPTRPPPDHVSIVEPKDERPPTAPSR 68
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 16 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPK 75
L QRAKSMKF DG +I SG P DY++ A RHVL RQGVLGIKVKIM WD GK
Sbjct: 75 LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL-RQGVLGIKVKIMFNWDPKGKQSLT 133
Query: 76 KPLPDNVNVLEP 87
PLPD V + P
Sbjct: 134 TPLPDLVTIQTP 145
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 20/33 (60%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEP 148
VLGIKVKIM WD GK PLPD V + P
Sbjct: 113 VLGIKVKIMFNWDPKGKQSLTTPLPDLVTIQTP 145
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 3 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKI 62
+GA+G + V+GKL+GQRAK++K+ DG I SG DYV +A +QG +G++V +
Sbjct: 127 AGAQGVMIRVAGKLKGQRAKAIKYFDGYFIQSGMAAKDYVRSAKSQAKCKQGTIGVQVSV 186
Query: 63 MLPWDSTGKTGPKKPLPDNVNVLEPK 88
MLP+D G G + D + ++EPK
Sbjct: 187 MLPYDPEGVVGSNTIISDRITIIEPK 212
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GA+GC +VVSGKL+GQRA+S K + I+SG P +Y+ V L+QGV+GI VK
Sbjct: 127 EAGAQGCIIVVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMRGGKSTVHLKQGVIGIIVK 186
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPK 88
IMLP D G GP++ + D + VL+ K
Sbjct: 187 IMLPHDPEGIRGPRREMVDKIRVLDVK 213
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GA G E ++SGKL QRAKSMK+ G +I +G P D ++ A RH +QG++G+KV
Sbjct: 129 MADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVN 83
KI P+D +GK G +PD V
Sbjct: 189 KIYRPYDPSGKKGIPIEVPDKVR 211
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GA G E ++SGKL QRAKSMK+ G +I +G P D ++ A RH +QG++G+KV
Sbjct: 129 MADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVKV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVN 83
KI P+D +GK G +PD V
Sbjct: 189 KIYRPYDPSGKKGIPIEVPDKVR 211
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
Query: 4 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM 63
GA G + VVS + +K KFVD LMI S + ++TA VLL+QGVL IK K+M
Sbjct: 130 GATGFKAVVS-----ENSKCRKFVDDLMILSRNSVY-LIDTAMCQVLLQQGVLAIKXKVM 183
Query: 64 LPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
LPWD GKT +K LP++++++EPK+EV PT P S+
Sbjct: 184 LPWDPAGKTDSRKALPEHMSIVEPKDEVLPTTPXSE 219
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFP 157
VL IK K+MLPWD GKT +K LP++++++EPK+EV P P
Sbjct: 175 VLAIKXKVMLPWDPAGKTDSRKALPEHMSIVEPKDEVLPTTP 216
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 39/44 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 44
MESGA GCEVVVSGKLRGQRAK++KFVDGLMIH G+P NDY T
Sbjct: 127 MESGANGCEVVVSGKLRGQRAKALKFVDGLMIHRGEPTNDYAET 170
>gi|262401161|gb|ACY66483.1| putative 40S ribosomal protein RPS3 [Scylla paramamosain]
Length = 66
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/45 (84%), Positives = 40/45 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 45
MESGAKGCEVVVSGKLRGQRAKSMKF DGLMIHSG+P YV+ A
Sbjct: 21 MESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRHYVDAA 65
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 38/42 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 42
MESGAKGCEVVVSGKLRGQRAKSMKF DGLMIHSG+P YV
Sbjct: 85 MESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRHYV 126
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
+SGA GCE VVS K RGQRAK+++FVDGL+I SGD N YV+T RHVLLR+ G + +
Sbjct: 235 DSGATGCEAVVSQKRRGQRAKALRFVDGLVIDSGDRVNYYVDTNVRHVLLRRCA-GHQGE 293
Query: 62 IMLPWDSTGKTGPKKPLP 79
WD + + + P P
Sbjct: 294 DRAAWDPSVRLALRTPCP 311
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESG KGCEV++SGKL Q AKS+KF DG +I SG DY+++ RHVLL+QG+L IK
Sbjct: 143 MESGTKGCEVIMSGKLCVQCAKSIKFKDGYLIFSGQLVKDYIDSTVRHVLLKQGILSIKF 202
Query: 61 KIML 64
L
Sbjct: 203 VFYL 206
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEV+V+GKLR QRA++ KF +G +I +G P ++ ATRH+ +RQGV+G+KV
Sbjct: 133 MRAGAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192
Query: 61 KIMLP 65
+I P
Sbjct: 193 RIYNP 197
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEV+V+GKLR QRA++ KF +G +I +G P ++ ATRH+ +RQGV+G+KV
Sbjct: 133 MRAGAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192
Query: 61 KIMLP 65
+I P
Sbjct: 193 RIYNP 197
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEVV+SGKL G R++ KFVDG + HSG+P ++ V+ + + G LG KV
Sbjct: 121 MNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVAS 115
+I+ P LPD+ EP E V T P + +KP AK E PV +
Sbjct: 181 RIIQPGVV---------LPDSYTTTEPSEPV--TEPVEKPAEKPAAKPAEKPVEA 224
>gi|170033439|ref|XP_001844585.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167874323|gb|EDS37706.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 258
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 22/98 (22%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
++SGAKG E V+ DPCN+Y +T TRHVLLR VL I+V
Sbjct: 163 VDSGAKGFEAVLF----------------------DPCNEYFDTITRHVLLRLEVLEIQV 200
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSS 98
KI+L W+ GK G K+PL NV V+E ++E+ P S
Sbjct: 201 KIILQWEPNGKIGQKEPLQHNVLVVEQRDEIMYNTPRS 238
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
VL I+VKI+L W+ GK G K+PL NV V+E ++E+
Sbjct: 195 VLEIQVKIILQWEPNGKIGQKEPLQHNVLVVEQRDEI 231
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGAKG ++VSGKL G+R+++ KF+DG M H G+P VN + + L+ GV+G+ V
Sbjct: 120 MGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK-EEVNPTIPSSQ 99
KIM P D T LPD + +L + +EV +SQ
Sbjct: 180 KIMKP-DVT--------LPDEITILSGEIKEVTEYSEASQ 210
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGAKG ++VSGKL G+R+++ KF+DG M H G+P VN + + L+ GV+G+ V
Sbjct: 120 MGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK-EEVNPTIPSSQ 99
KIM P S LPD + +L + +EV +SQ
Sbjct: 180 KIMKPDVS---------LPDEITILSGEIKEVTEYSEASQ 210
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGAKG ++VSGKL G+R+++ KF+DG M H G+P VN + + L+ GV+G+ V
Sbjct: 120 MGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK-EEVNPTIPSSQ 99
KIM P S LPD + +L + +EV +SQ
Sbjct: 180 KIMKPDVS---------LPDEITILSGEIKEVTEYSEASQ 210
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEV+V+GKL G R+++ KF +G + HSG+P V + + G +G++V
Sbjct: 121 MESGALGCEVIVAGKLTGARSRTQKFTEGYVKHSGEPSETIVEKGYALAVKKLGTIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KI+ P G K LPD VLEP+
Sbjct: 181 KIVPP-------GAK--LPDTFEVLEPE 199
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEVV+SGKL G RA+ KF +G + HSG+P V + + G +G++V
Sbjct: 121 MESGALGCEVVLSGKLTGARARVQKFTEGYIKHSGEPSITIVEKGYAIAIKKLGTIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
KI +P P LPD +L+ K P IP+ Q
Sbjct: 181 KI-IP--------PDAKLPDQFEILDVK---KPEIPAEQ 207
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEV+V+GKL G R+++ KF +G + H G+P V + + G +G++V
Sbjct: 121 MESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIP 96
KI +P P LPD +VLEP+ + P P
Sbjct: 181 KI-VP--------PDARLPDAFDVLEPEPKKAPAEP 207
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEVV+SGKL G R++ KF +G + H+G+P V + + GV+G +V
Sbjct: 121 MESGALGCEVVISGKLTGARSRVQKFTEGYIKHAGEPSETIVEHGFAIAIKKLGVIGCQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KI +P P LPD+ VLEP+
Sbjct: 181 KI-VP--------PGAQLPDHFEVLEPE 199
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 56
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQ L
Sbjct: 132 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQVFL 187
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 53
ME+GAKG EV VSGKLR QRAK MKF DG ++ +G P YV+ A R+V +RQ
Sbjct: 132 MENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCEVV++GKL G RA++ KF +G + H G+P N V + + GV+G++V
Sbjct: 121 MDSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
KI +P D+ +PD+ ++E ++++
Sbjct: 181 KI-VPADA--------KMPDHFAIIEQEKKL 202
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCE+ +SGKL +RA++ KF+ G M+H+G+P + V + + GVLG+ V
Sbjct: 120 MEAGAKGCEIEISGKLTSERARTEKFLAGTMVHTGEPASSMVRKGFDIAIKKLGVLGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLD 102
+I +P P LPD V KE P + +Q +
Sbjct: 180 RI-IP--------PDVELPDEFRV---KEITAPDVTEAQAQE 209
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 36/47 (76%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 47
ME+GAKG EV VSGKLR QRAK MKF DG MI SG+P YV++A R
Sbjct: 127 MEAGAKGVEVAVSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVR 173
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG ++VSGKL G+R+++ KF+DG M H G+P + V + + L+ GV+G+ V
Sbjct: 120 MNAGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPSEELVMKSHQLAKLKLGVVGVTV 179
Query: 61 KIMLP 65
KIMLP
Sbjct: 180 KIMLP 184
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGAKG ++VSGKL G+R+++ KF+DG M H G+P VN + + L+ G++G+ V
Sbjct: 120 MGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMRP 184
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 11/95 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP--KEEVNP 93
IM P D+ LPD + ++E +EEV P
Sbjct: 181 AIM-PPDAR--------LPDEIEIIEKPVEEEVAP 206
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCE+V+SGKL G R++ KF++G + H G+P V + + G++G++V
Sbjct: 121 MESGALGCEIVLSGKLTGARSRVQKFLEGYVKHCGEPSITIVEKGYAIAIKKLGIIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTI-PSSQVLDKPLAKLGEI 111
KI +P D+ LPD VL PK T+ S+ + D A+L E
Sbjct: 181 KI-IPGDA--------KLPDRFEVLPPKPYSAETVEESTNIGDDVDAELAEF 223
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCEVVVSGKL G RA+ KF +G + H+G+P V + + G +G +V
Sbjct: 121 MESGALGCEVVVSGKLTGSRARVQKFTEGYIKHAGEPSETIVEHGFAIAVKKLGCIGCQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
KI+ P LPD+ V+EP+
Sbjct: 181 KIVPPG---------AILPDHFEVIEPE 199
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF DG + G+P YV L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGE 110
+IM P D LPD V++++PK E + + ++ P+ ++ E
Sbjct: 180 RIM-PPDVV--------LPDKVDIIQPKVEEPVASEAVETVEAPVEEITE 220
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF DG + G+P YV L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGE 110
+IM P D LPD V++++PK E +++ ++ P ++ E
Sbjct: 180 RIM-PPDVV--------LPDKVDIIQPKVEEPVESKAAEAVEAPTEEITE 220
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GVLG+KV
Sbjct: 121 MNNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P D+ LPD + ++E P EE
Sbjct: 181 SIM-PPDAR--------LPDEIEIIEKPVEE 202
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCE+ +SGKL +RA++ KFV G ++H+GDP V + + GVLG+ V
Sbjct: 120 MEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
+I +P D T LPD V
Sbjct: 180 RI-IPPDVT--------LPDEFEV 194
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEVV+SGKL G R++ KFVDG + HSG P + V+ + + G LG KV
Sbjct: 121 MNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT-IPSSQVLDKP 104
+I+ P LPD+ V E E P P+ + ++KP
Sbjct: 181 RIIQ---------PGVVLPDSYKVRESVEIEEPAEKPAEKQVEKP 216
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEVV+SGKL G R++ KFVDG + HSG P + V+ + + G LG KV
Sbjct: 121 MNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT-IPSSQVLDKP 104
+I+ P LPD+ V E E P P+ + ++KP
Sbjct: 181 RIIQ---------PGVVLPDSYKVRESVEIEEPAEKPAEKQVEKP 216
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE---PKEEVN 92
IM P P LPD + V+E +EEV+
Sbjct: 181 SIM-P--------PDAKLPDEIEVIEKPIQEEEVS 206
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 11/94 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GVLG+KV
Sbjct: 121 MSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP--KEEVN 92
IM P D+ LPD + ++E +EEV+
Sbjct: 181 SIM-PPDAR--------LPDEIEIVEKPIEEEVS 205
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 11/94 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP--KEEVN 92
IM P P+ LPD + ++E +EEV+
Sbjct: 181 AIM-P--------PEARLPDEIEIIEKPLEEEVS 205
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG +++SGKL G+R+++ KF+DG M H G+P + V + + L+ G++G+ V
Sbjct: 120 MAAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVL 85
KIM P S LPD + +L
Sbjct: 180 KIMRPDVS---------LPDEIIIL 195
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCEVV+SGKL G R + KF +G + HSGDP N V+ + + GV+G++V
Sbjct: 121 MDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
+ ++P P LPD+ V
Sbjct: 181 R-LIP--------PGAQLPDHFEV 195
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P D+ LPD + ++E P EE
Sbjct: 181 AIM-PPDAR--------LPDEIEIIEKPVEE 202
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 22/116 (18%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA GCEV+++GKL G RA+ KF +G + HSG+P N V + + GV+G++V
Sbjct: 121 MDAGALGCEVIIAGKLTGARARVQKFTEGYIKHSGEPVNTIVEKGYAVAVKKLGVIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASV 116
KI+ G K +PD+ V +E KP K EIPV SV
Sbjct: 181 KII-------PAGAK--IPDHFEVTAKRE-------------KPEKKGIEIPVVSV 214
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P P+ LPD + ++E P EE
Sbjct: 181 AIM-P--------PEARLPDEIEIIEKPVEE 202
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 38/43 (88%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVN 43
+ESGA+G V+VSGK++ QRAK+MKF +GL+IHSGDP N+Y++
Sbjct: 110 IESGARGVGVIVSGKIKDQRAKAMKFCNGLIIHSGDPVNNYID 152
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P D+ LPD + ++E P EE
Sbjct: 181 AIM-PPDAR--------LPDEIEIVEKPAEE 202
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCEV+++GKL G RA+ KFV+G + HSG+P V + + G++G++V
Sbjct: 121 MDSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKL 108
KI+ P G K LPD + + + + ++ A+L
Sbjct: 181 KIVPP-------GAK--LPDQFEIRADAAPAPARVVETDIFEEFDAEL 219
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+V+SGKL QR ++ KF G + SG+P + V+ A HVLL+ G+ G+KV
Sbjct: 122 MAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKV 181
Query: 61 KIMLP 65
+IM P
Sbjct: 182 RIMKP 186
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCEVV++GKL G RA++ KF +G + H G+P N V + + GV+G++V
Sbjct: 121 MDSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAVAVKKLGVIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
K++ G K LPD+ +V+E
Sbjct: 181 KLV-------PAGAK--LPDHFSVVE 197
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+V+SGKL QR ++ KF G + SG+P + V+ A HVLL+ G+ G+KV
Sbjct: 107 MAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKV 166
Query: 61 KIMLP 65
+IM P
Sbjct: 167 RIMKP 171
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P D+ LPD + ++E P EE
Sbjct: 181 AIM-PPDAR--------LPDEIEIIEKPVEE 202
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H GDP V A + L+ GV+G+ V
Sbjct: 120 MNAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMPP 184
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-PKEE 90
IM P LPD + ++E P EE
Sbjct: 181 AIMPPGAR---------LPDEIEIIEKPVEE 202
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF +G + G+P YV V L+ GVLGI V
Sbjct: 120 MSAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
+IM P+ LPDN+ + EP+
Sbjct: 180 RIM---------PPEVTLPDNIEISEPE 198
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H GDP V A + L+ GV+G+ V
Sbjct: 120 MNAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMPP 184
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H G+P D V+ L + GV+G+ V
Sbjct: 120 MNAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGEPAEDLVDKGRAIALTKPGVIGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
KIM P LPD + + E EV
Sbjct: 180 KIMR---------PDVLLPDEIVIKEKDMEVK 202
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ L+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAKLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IM P P LPD + VLE +E
Sbjct: 181 SIM-P--------PDAKLPDEIEVLEKVQE 201
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ + KF DG + G+P +V V L+ GVLG+ V
Sbjct: 120 MAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT-IPSSQV 100
+IM P+ LPD V + PK P+ P+ QV
Sbjct: 180 RIM---------PPEVVLPDKVEIEAPKVTETPSEEPAEQV 211
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCEVV+SGKL G R++ KFVDG + HSG+P + V+ + + G LG KV
Sbjct: 121 MNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
+I+ P LPD+ V E E
Sbjct: 181 RIIQ---------PGVVLPDSYKVRESVE 200
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGCE+ +SGKL +RA++ KF+ G +IH+GDP V + + GV G++V
Sbjct: 120 MEAGAKGCEIEISGKLTSERARTEKFIAGTIIHTGDPAITCVREGFDIAIKKLGVYGVRV 179
Query: 61 KIMLP 65
+I+ P
Sbjct: 180 RIIPP 184
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 22/111 (19%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG ++++SGKL G RA++ KF+DG + ++G P + V + G++G+ V
Sbjct: 120 MEAGAKGAQIIISGKLTGDRARTEKFMDGTIKYNGKPV-ELVRMGYATAKTKPGIIGVTV 178
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP------------KEEVNPTIPSSQ 99
KIM P P LPD VN+L P KEEVN +Q
Sbjct: 179 KIM-P--------PDAKLPDEVNILPPVEAEEEKVNEDIKEEVNENAEGTQ 220
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGK+RG RA S+KF +G + G+P +V T L+ GVLG+ V
Sbjct: 120 MAAGAQGAEITISGKIRGARATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
KIM P G K LPD + +
Sbjct: 180 KIMPP-------GVK--LPDEIKI 194
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA G E+V++GKL G R ++ KF+ G + H G P ++V+ + G++G+KV
Sbjct: 121 MDSGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEEFVDVGYARAKKKLGIIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+IM P LPD++ VL K+E
Sbjct: 181 RIMPPGSV---------LPDHIEVLPIKKE 201
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ L+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQARLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP--KEEVN 92
IM P P LPD + V+E +EEV+
Sbjct: 181 SIM-P--------PDAKLPDEIEVIEKLVEEEVS 205
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ +L+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAVLKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
IM P P LPD + + E EE
Sbjct: 181 SIM-P--------PDAKLPDEIGIKEIVEE 201
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GC +V+SGKL G R++ K V+G ++H+G P + V+T + + G +G K+
Sbjct: 121 MGAGALGCRIVLSGKLTGPRSRIEKIVEGYIVHAGKPAEEIVHTGFATAVRKLGTIGCKI 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
+I+LP D+T LPD N++E
Sbjct: 181 QIVLP-DTT--------LPDVFNLVE 197
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G++V
Sbjct: 121 MESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDHGVGTAVMKLGTIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P+ LPD+ V E E
Sbjct: 181 KI-IP--------PEAELPDDFEVYEDME 200
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG E+V+SGK+ G R++ KF G + H+G+P D V+ +++ G +G+ V
Sbjct: 121 MESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P+ LPD+ + E E
Sbjct: 181 KI-IP--------PEAELPDDFEIYEDVE 200
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ + KF DG + G+P +V V L+ GVLG+ V
Sbjct: 120 MAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
+IM P D LPD V + +P+ P +S+
Sbjct: 180 RIM-PPDVV--------LPDKVEIEDPRVTETPAEEASE 209
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCEV+++GKL G R + KF+ G + H G P + V+ + G++G+KV
Sbjct: 121 MDSGAMGCEVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
+IM P P+ LPD + +
Sbjct: 181 RIM-P--------PEAVLPDQITI 195
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF DG + G+P N +V V L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSACSKFTDGYIKKCGEPANKHVRKGFATVQLKPGVLGIYV 179
Query: 61 KIMLP 65
+IM P
Sbjct: 180 RIMPP 184
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MEAGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P+ LPD+ + E E
Sbjct: 181 KI-IP--------PEAELPDDFEIYEDVE 200
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKGC++ +SGKL +RA++ KF G ++H+GDP + V+ + + GV G+ V
Sbjct: 120 MEAGAKGCQIEISGKLVSERARTEKFTAGTIVHTGDPAYELVDKGFDIAIKKLGVYGVSV 179
Query: 61 KIMLP 65
KI+ P
Sbjct: 180 KIIPP 184
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKG E+V+SGK+ G R++ KF G + H+G+P D V+ +++ G +G+ V
Sbjct: 121 MESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ + E E
Sbjct: 181 KI-IP--------PNAELPDDFEIYEDVE 200
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V++GKL G R ++ KF+ G + H G P +++ + GV+G+KV
Sbjct: 121 MDAGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEQFIDVGYARAKKKLGVIGVKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
+IM P LPD++ ++ P++E
Sbjct: 181 RIMPPGTV---------LPDHIEIVPPQKEAE 203
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KFV+G + G+P V V L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK 88
+IM P P+ LPD+V +L PK
Sbjct: 180 RIM-P--------PETVLPDSVEILPPK 198
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/31 (93%), Positives = 29/31 (93%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLM 31
MES AKGCEVVVSGKLRGQRAKSM FVDGLM
Sbjct: 126 MESQAKGCEVVVSGKLRGQRAKSMTFVDGLM 156
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF DG + G+P +V V L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSACAKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
+IM P D LPD V++L+
Sbjct: 180 RIM-PPDVV--------LPDKVDILQ 196
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLP 65
IM P
Sbjct: 181 AIMPP 185
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKG V+VSGKL G+R+++ K+++G M H G+P + V+ + L+ GV+G+ V
Sbjct: 120 MAQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMPP 184
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ LL+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKV 180
Query: 61 KIMLP 65
IM P
Sbjct: 181 AIMPP 185
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG EV +SGKL R+++ KF +G M SG+ +YV VLL+ G+ G++V
Sbjct: 121 MEAGAKGVEVHISGKLTSARSRTEKFTEGFMPKSGELAMNYVLEGKSSVLLKTGLFGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
++ P P PLP+ + V
Sbjct: 181 -LIYP--------PDAPLPEEIKV 195
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H G+P + V+ + + GV+G+ V
Sbjct: 120 MNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGSAIAKTKPGVIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMRP 184
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA GCE+V+SGKL G R+++ KF+ G + HSG P D V+ + + GV+G +V
Sbjct: 121 MDAGALGCEIVISGKLTGPRSRTEKFIAGYIKHSGKPAIDLVDRGYSVAVKKLGVIGCQV 180
Query: 61 KIMLP 65
+I+ P
Sbjct: 181 RIIPP 185
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+V+SGKL G R++S K V G + H+G P D V+ + + G LG KV
Sbjct: 121 MNAGALGCEIVISGKLTGSRSRSEKIVQGYIKHAGKPAEDIVDEGFAVAVKKLGTLGCKV 180
Query: 61 KIMLP 65
+I+ P
Sbjct: 181 RIIPP 185
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+V+SGKL G R++ K V+G + H+G P +D V+ + + G +G V
Sbjct: 121 MGAGALGCEIVLSGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDYGFATAVKKLGTIGCVV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE--PKEEV 91
+I +P P LPDN N++E KEEV
Sbjct: 181 RI-IP--------PGAILPDNFNLIEVPVKEEV 204
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+++SGK+ G R++ KF G + H+G+P V++ +++ G +G++V
Sbjct: 121 MESGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGVQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P+ LPD+ V E E
Sbjct: 181 KI-IP--------PEAELPDDFEVYEDIE 200
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H G+P + V+ + GV+G+ V
Sbjct: 120 MNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMRP 184
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H G+P + V+ + GV+G+ V
Sbjct: 120 MNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMRP 184
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PDAELPDDFEIYE 197
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+V+SGKL G R++ K V+G + H+G P +D V+ + + G LG KV
Sbjct: 121 MNAGALGCEIVISGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDDGFATAVKKLGTLGCKV 180
Query: 61 KIMLP 65
+I+ P
Sbjct: 181 RIIHP 185
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PDAELPDDFEIYE 197
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PDAELPDDFEIYE 197
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PDAELPDDFEIYE 197
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PDAELPDDFEIYE 197
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PNAELPDDFEIYE 197
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G+P + V++ +++ G +G++V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PNAELPDDFEIYE 197
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA GCE+V+SGKL G R++ KF+ G + HSG P + V+T + + G +G +V
Sbjct: 121 MDSGALGCEIVISGKLTGPRSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQV 180
Query: 61 KIMLP 65
+I+ P
Sbjct: 181 RIVPP 185
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG V++SGKL G+RA++ KF+ G M H G+P + V+ + G++G+ V
Sbjct: 120 MNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGIIGVTV 179
Query: 61 KIMLP 65
KIM P
Sbjct: 180 KIMRP 184
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG +++++GKL G RA++ KF+ G + ++G P + V + G++G+ V
Sbjct: 120 MEAGAKGAQIIIAGKLTGDRARTEKFMAGTIKYNGKPV-ELVRFGYATAKTKPGIIGVTV 178
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
KIM P P LPD +N++ P EE
Sbjct: 179 KIM-P--------PDAKLPDEINIIPPSEE 199
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G E+ +SGKL G+RAKS++F G + G+P V+ L+ GV+G+KV
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKV 180
Query: 61 KIMLP 65
IM P
Sbjct: 181 SIMPP 185
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 35
MESGAKGCEV V GK++GQRAKSM F DG MI SG
Sbjct: 126 MESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSG 160
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTVVDEGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
K++ GP LPD+ + E E
Sbjct: 181 KVI---------GPDAVLPDDFEIYETDE 200
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+V+SGKL G R++ K V G + H+G P +D V+ + + G LG KV
Sbjct: 121 MNAGALGCEIVISGKLTGARSRVEKIVQGYIKHAGKPVDDIVDEGFAVAVKKLGTLGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+I +P P LPD+ ++ + EE
Sbjct: 181 RI-IP--------PGAVLPDSFHLKDIAEE 201
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA GCE+++SGKL G R++ KF+ G + HSG P + V+ + + G +G +V
Sbjct: 121 MESGALGCEIILSGKLTGPRSRVEKFLSGYVKHSGKPSQEIVDHGYAVAVKKLGTIGCQV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEP-KEEVNPTIPSSQVLDK 103
+I +P D+ PD ++ P KE+ +P + D+
Sbjct: 181 RI-VPPDAV--------PPDRFEIVPPSKEQAEEALPVEEKRDE 215
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 40 DYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
+Y TAT LRQG GI+VKIMLPWD G GPK+ L DNV ++EP++E+ +Q
Sbjct: 106 EYYATAT---PLRQGEFGIQVKIMLPWDPNGIFGPKESLSDNVKMVEPEDEIMYNTQRTQ 162
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 117 LGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEV 152
GI+VKIMLPWD G GPK+ L DNV ++EP++E+
Sbjct: 119 FGIQVKIMLPWDPNGIFGPKESLSDNVKMVEPEDEI 154
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ +V L+PKE V + +++
Sbjct: 181 KI-IP--------PNAQLPDDFHVHEDLDPKEIVPDAVEANEA 214
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGKLRG+RA K G + +GD + V+ A LL+ G+ G++V
Sbjct: 124 MDAGALGAEIVISGKLRGERATYEKMRTGKIYKAGDLVDYIVDRAVAKTLLKPGIFGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVA 114
I+ P PLPD V + + K E Q L +P K GE PV
Sbjct: 184 IIV---------KPSIPLPDQVELKQLKPE------ELQELAQPQVK-GEAPVG 221
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+G EV +SGK+RG R+ KF +G + G+P +V L+ GVLGI V
Sbjct: 120 MGAGAQGVEVTISGKIRGSRSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVL 85
+IM P P+ LPD V+++
Sbjct: 180 RIM-P--------PEATLPDKVDII 195
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA G E+++SGK+ G R++ KF G + H+G+P V++ +++ G +G++V
Sbjct: 121 MDSGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAETIVDSGVGTAVMKLGTIGVRV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ V E E
Sbjct: 181 KI-IP--------PNAELPDDFEVYEDVE 200
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQATAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ V E+V+P
Sbjct: 181 KI-IP--------PGAELPDDFEV---SEDVDP 201
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ +V L+P+E V + +++
Sbjct: 181 KI-IP--------PNAQLPDDFHVHEDLDPEELVPDAVEANEA 214
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 15/118 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G +V VSGKLRG+RA+ K++ G + SG+ + A HVLL+ GV G++V
Sbjct: 126 MGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEV 185
Query: 61 KIMLPWDSTGKTGPKKP-------LPDNVN--VLEPKEEVNPTIPSSQVLDKPLAKLG 109
I + K+ ++P P+ VN V + +EE+ T P + L++ + + G
Sbjct: 186 II------SKKSEEERPDDEVRIKSPEEVNEIVQKIREEMQQTQPEAPTLEETVEQSG 237
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E++VSGKLRG+RA K G + +G+P V+ A LL+ G+ G++V
Sbjct: 124 MDAGAVGAEIIVSGKLRGERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPGIFGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV--LEPKE 89
I+ P LPD+V V L+P+E
Sbjct: 184 VIV---------KPNIKLPDHVEVKALKPEE 205
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGA GCE+++SGK+ G R++ K V+G + H+G P +D V+ + + G +G KV
Sbjct: 121 MNSGALGCEIILSGKVTGARSRVEKMVNGYIKHAGKPVDDIVDEGFAVAVKKLGTIGCKV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
+I+ P LPD+ ++ E EE
Sbjct: 181 RIIH---------PGAVLPDSYHLKEIVEE 201
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFV 27
MESGA+GCEVVVSGKLRGQRAKSMKFV
Sbjct: 99 MESGARGCEVVVSGKLRGQRAKSMKFV 125
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M GAKG E+ +SGK QRA+ +F +G++ G + V A +HVL+ QG++G++V
Sbjct: 127 MAEGAKGVEIRLSGKFGSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRV 186
Query: 61 KIMLP 65
+I+ P
Sbjct: 187 RIVKP 191
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ + L+P+E V + +++
Sbjct: 181 KI-IP--------PDAQLPDDFEIHEDLDPEEVVPEAVEANEA 214
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P ++ V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIM-----LPWDSTGKTG--PKKPLPDNVNVLEPKEEVNPTIP 96
KI+ LP D + G P+ +PD V E EE+ P
Sbjct: 181 KIIPPGAELPDDFHVEEGLDPEAVVPDAVEANEGVEELLEGTP 223
>gi|170060367|ref|XP_001865771.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878835|gb|EDS42218.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 225
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 36 DPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVN 83
+PCN YV+TAT HVLLR GVLG+ VK ML WD+ KPL DN++
Sbjct: 116 NPCNVYVDTATHHVLLRPGVLGVMVKTMLLWDAK----VNKPLSDNIS 159
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R++ KF G + H+G P + V+ +++ G +G+ V
Sbjct: 121 MESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEVVDHGQATAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ V ++P+E V + +++
Sbjct: 181 KI-IP--------PGAELPDDFQVHDEMDPEEVVPDAVEANEA 214
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+G E+ ++GK+ G R+++ KF G + H+G+P D V+ +++ G +G+ V
Sbjct: 121 MDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQDIVDRGDGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGE 110
KI +P P LPD+ + E + +P D+ A LGE
Sbjct: 181 KI-IP--------PNADLPDDFRIHEDV-DTESLVPEDIEGDEVEALLGE 220
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RAK K G + G + V A HVLL+ G+ GI+V
Sbjct: 135 MEAGAKGFEIVVSGKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 194
Query: 61 KI 62
+I
Sbjct: 195 RI 196
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+++SGKLR +RA+ K G + +GD + V+ A LL++GV G++V
Sbjct: 124 MEAGAVGAEIIISGKLRSERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK-EEVNPTIP 96
I+ P KP PD V + K EE+ IP
Sbjct: 184 VIVRPH--------LKP-PDYVEIKSVKPEELADLIP 211
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLP-------WDSTGKTGPKKPLPDNVNVLE 86
KI+ P ++ + P++ +PD V V E
Sbjct: 181 KIIPPGAELPDDFEVSEDMDPEEVVPDAVEVNE 213
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLP-------WDSTGKTGPKKPLPDNVNVLE 86
KI+ P ++ + P++ +PD V V E
Sbjct: 181 KIIPPGAELPDDFEVSEDMDPEEVVPDAVEVNE 213
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RAK K G + G + V A HVLL+ G+ GI+V
Sbjct: 131 MEAGAKGFEIVVSGKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190
Query: 61 KI 62
+I
Sbjct: 191 RI 192
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLP-------WDSTGKTGPKKPLPDNVNVLE 86
KI+ P ++ + P++ +PD V V E
Sbjct: 181 KIIPPGAELPDDFEVSEDMDPEEVVPDAVEVNE 213
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ + ++P+E V + +++
Sbjct: 181 KI-IP--------PNAELPDDFQIHEDMDPEELVPEAVEANEA 214
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 12/108 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P ++ V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQVLDKPL 105
KI +P P LPD+ +V L+P+E V + +++ +++ L
Sbjct: 181 KI-IP--------PGAELPDDFHVEEDLDPEEVVPDAVEANEGVEELL 219
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+++SGKL G RA+ K V G + H+G P +D V+ + + G +G KV
Sbjct: 121 MGAGALGCEIIMSGKLTGPRARVEKLVRGYIKHAGKPVDDIVDEGFATAVKKLGTIGCKV 180
Query: 61 KIMLP 65
+I+ P
Sbjct: 181 RIIHP 185
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ + ++P+E V + +++
Sbjct: 181 KI-IP--------PNAELPDDFQIHEDMDPEELVPEAVEANEA 214
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ + ++P+E V + +++
Sbjct: 181 KI-IP--------PNAELPDDFQIHEDMDPEELVPEAVEANEA 214
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V
Sbjct: 131 MEAGAKGFEIVVSGKLSTERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190
Query: 61 KI 62
+I
Sbjct: 191 RI 192
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ +V E E
Sbjct: 181 KIIPP----GAT-----LPDDFDVREDAE 200
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ +V E E
Sbjct: 181 KIIPP----GAT-----LPDDFDVREDAE 200
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 32/99 (32%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGAKGCEVVVSGKLR RAKSMKF + C +
Sbjct: 130 MESGAKGCEVVVSGKLRAARAKSMKF-------TSKSCAAAI------------------ 164
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
G+ G + LPD+V ++EPKEE P SQ
Sbjct: 165 -------PEGEVGSPEILPDSVTIIEPKEEQPVLQPLSQ 196
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
MESGA G E+V+SGK+ G R + KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MESGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PNAELPDDFEIQE 197
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+V+SGKL +RA+ K G + SG+ V+ A HVLL+ G+ GI+V
Sbjct: 122 MAAGAIGCEIVISGKLVAERARYEKLKMGKVYKSGEQSFRLVDRAVAHVLLKPGMYGIEV 181
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
I P G T D+V +++ ++EV+
Sbjct: 182 LITRP----GLT------ADHVEIVQKEQEVS 203
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+++SGKLR +RA+ K G + +GD + V+ A LL++GV G++V
Sbjct: 124 MEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEV 183
Query: 61 KIMLP 65
I+ P
Sbjct: 184 VIVRP 188
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 30/43 (69%)
Query: 48 HVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 90
HV +GVLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 119 HVFEFRGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 161
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%)
Query: 116 VLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEE 151
VLGIKVKIML WD GK GP PLPD V + PKEE
Sbjct: 126 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE 161
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/31 (90%), Positives = 28/31 (90%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLM 31
MESGAKG EV VSGKLRGQRAKSM FVDGLM
Sbjct: 127 MESGAKGGEVGVSGKLRGQRAKSMMFVDGLM 157
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK--EEVNP 93
KI+ P G K LPD+ V E EEV P
Sbjct: 181 KIIPP-------GAK--LPDDFAVYEDMDPEEVVP 206
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E E+V+P
Sbjct: 181 KI-IP--------PNAELPDD---FEIHEDVDP 201
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E E+V+P
Sbjct: 181 KI-IP--------PNAELPDD---FEIHEDVDP 201
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G K LPD+ ++ E E
Sbjct: 181 KIIPP-------GAK--LPDDFDIREDAE 200
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 12/102 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQ 99
KI+ P G K LPD+ V ++P+E V + +++
Sbjct: 181 KIIPP-------GAK--LPDDFQVHDEMDPEEVVPDAVEANE 213
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ ++ E E
Sbjct: 181 KI-IP--------PGAQLPDDFDIREDAE 200
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ V E E
Sbjct: 181 KIIPP----GAT-----LPDDFEVREDAE 200
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ V E E
Sbjct: 181 KIIPP----GAT-----LPDDFEVREDAE 200
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+++SGKLRG+RA K G + +G+P V+ A LL+ G+ G++V
Sbjct: 124 MDAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPGIFGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
I+ P G K P + L+P+E
Sbjct: 184 VIVKP-------GIKMPDHVEIKTLKPEE 205
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG +++SGKL G+R+++ KF++G M H G+P V A + L+ G++G+ V
Sbjct: 120 MGAGAKGIVIIISGKLTGERSRTEKFMEGYMKHCGEPSEVLVKKAHKLAKLKLGIIGVTV 179
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEI 111
KIM P P+ LPD + + + EV +++ A +GE+
Sbjct: 180 KIM-P--------PEIVLPDEIVIRDGAGEVQEV-----AVNESAAVVGEV 216
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 313
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK--EEVNP 93
KI +P P LPD+ V E EEV P
Sbjct: 181 KI-IP--------PGAELPDDFAVYEDMDPEEVVP 206
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ SG +GC + + G R +R K+ KF GL+ HSG ND++++ + ++ ++G LGI +
Sbjct: 169 INSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYLNKKRGTLGINI 228
Query: 61 KIM 63
KIM
Sbjct: 229 KIM 231
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI+ P G K LPD+ E +E+ NP
Sbjct: 181 KIIPP-------GAK--LPDD---FEVEEDANP 201
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI+ P G K LPD+ E +E+ NP
Sbjct: 181 KIIPP-------GAK--LPDD---FEVEEDANP 201
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35.1|RS3_METKA RecName: Full=30S ribosomal protein S3
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GAKG +++SGKL G RA++ KF++G + + G+P ++Y+ + + G +G+ V
Sbjct: 129 MNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTV 188
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
+IM P LPD + + P+E
Sbjct: 189 RIM---------PPDVELPDELEIRPPEE 208
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ V E E
Sbjct: 181 KIIPP----GAT-----LPDDFEVREDAE 200
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKEEVNPTIPSSQV 100
KI +P P LPD+ V ++P+E V + +++
Sbjct: 181 KI-IP--------PGAELPDDFEVNEDMDPEELVPDAVEANEA 214
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI+ P LPD+ E EE++P
Sbjct: 181 KIIPPG---------AELPDD---FEIHEEMDP 201
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V
Sbjct: 138 MEAGAKGFEIVVSGKLSTERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 197
Query: 61 KI 62
+I
Sbjct: 198 RI 199
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ ++ E E
Sbjct: 181 KI-IP--------PGAQLPDDFDIREDAE 200
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ V EE++P
Sbjct: 181 KI-IP--------PGAELPDDFGV---HEEMDP 201
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P D V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKL 108
KI +P P LPD+ + + EV I + D+ + ++
Sbjct: 181 KI-IP--------PGAQLPDDFEIHDDA-EVEDLIAETADTDEGVEEI 218
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G K LPD+ ++ E E
Sbjct: 181 KIIPP-------GAK--LPDDFDIREDAE 200
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EVV+SGKLR +RA K G++ SGD V T HVL + G++GI++
Sbjct: 121 MNAGALGVEVVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQL 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI+ P LPD+ E EE++P
Sbjct: 181 KIIPPG---------AELPDD---FEIHEEMDP 201
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+G E+ ++GK+ G R++ KF G + H+G+P D V+ +++ G +G+ V
Sbjct: 121 MDAGARGAEITLNGKVTGARSRDEKFNRGYIKHNGEPSKDIVDRGNGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
+I +P P LPD+ + E
Sbjct: 181 RI-IP--------PNAELPDDFRIRE 197
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+E+GA G E+V+SGKL +RAK K G +I +GD + YV+ A H L QG+ G+++
Sbjct: 122 IEAGAIGAEIVISGKLTNERAKFEKLQMGKVIKTGDIVDQYVDKAVAHAKLPQGIYGVRI 181
Query: 61 KIM 63
I+
Sbjct: 182 IIV 184
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EVV+SGKLR +RA K G++ SGD V T HVL + G++GI++
Sbjct: 107 MNAGALGVEVVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQL 166
Query: 61 KI 62
+I
Sbjct: 167 RI 168
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE---PKEEVNPTIPSSQV 100
KI +P P LPD+ + E P+E V + +++
Sbjct: 181 KI-IP--------PNAELPDDFEIHEDADPEELVPEAVEANEA 214
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G T LPD+ + E E
Sbjct: 181 KIIPP----GAT-----LPDDFEIREDAE 200
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ V E E
Sbjct: 181 KI-IP--------PGAQLPDDFEVEEDAE 200
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+++SGKLRG+RA K G + +G+P V+ A LL+ G+ G++V
Sbjct: 124 MDAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYIVDRAVVKALLKPGIFGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV--LEPKE 89
I+ P +PD+V + L+P+E
Sbjct: 184 VIVKPGIR---------MPDHVEIKTLKPEE 205
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI+ P G + LPD+ V E E
Sbjct: 181 KIIPP-------GAR--LPDDFEVEEDAE 200
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA G E+V+SGK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTIVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE---PKEEVNPTIPSSQVLD 102
KI +P P LPD+ + E P+E V + +++ D
Sbjct: 181 KI-IP--------PGADLPDDFQIEEGANPEELVPDAVEANEAAD 216
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+G E+ ++GK+ G R+++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQEIVDRGDGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGE 110
KI +P P LPD+ + E + +P D+ A LGE
Sbjct: 181 KI-IP--------PNADLPDDFRIHEDV-DTESLVPDEIEGDEVEALLGE 220
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V
Sbjct: 131 MEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190
Query: 61 KI 62
+I
Sbjct: 191 RI 192
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNP 93
KI +P P LPD+ E +E+ NP
Sbjct: 181 KI-IP--------PGARLPDD---FEVEEDANP 201
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R + KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVSV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ + E
Sbjct: 181 KI-IP--------PNAKLPDDFEIQE 197
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ESGA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 IESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKK-PLPDNVNVLEPKEEV 91
KI+ P G P + D+V+V EP E+V
Sbjct: 181 KIIPP----GAELPDDFEIHDDVDV-EPVEQV 207
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V
Sbjct: 109 MEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 168
Query: 61 KI 62
+I
Sbjct: 169 RI 170
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ +GA G E+V+SGKLR +RA+ K G + +G V+ A HVLL+ GV GI+V
Sbjct: 122 LAAGAIGAEIVISGKLRTERARYEKLRAGKVYSTGYQVEYMVDRAVMHVLLKPGVYGIEV 181
Query: 61 KIMLP 65
KI+ P
Sbjct: 182 KIVKP 186
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GAKG E+VVSGKL +RA+ K G + G + V A H+LL+ G+ GI+V
Sbjct: 131 MEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDARNRVRRAVIHILLKPGIYGIEV 190
Query: 61 KI 62
+I
Sbjct: 191 RI 192
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+SGA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIM-----LPWDS--TGKTGPKKPLPDNVNVLE 86
KI+ LP D P++ +PD V E
Sbjct: 181 KIIPPGAELPDDFQINDDADPEELVPDAVEANE 213
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI+ P G K LPD+ V E
Sbjct: 181 KIIPP-------GAK--LPDDFEVEE 197
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ ++ E +
Sbjct: 181 KI-IP--------PGAQLPDDFDIREDAD 200
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+G E+ ++GK+ G R+++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTI 95
KI +P P LPD+ + +E+V+ ++
Sbjct: 181 KI-IP--------PDAELPDDFRI---QEDVDTSV 203
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+++SGKLRG+RA K G + +G+P ++ A LL+ G+ G++V
Sbjct: 124 MDAGAVGAEIIISGKLRGERATYEKMRVGKIYKAGEPVEYIIDRAVARALLKPGIYGVEV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV 84
I+ P G K LPD+V +
Sbjct: 184 LIVKP-------GIK--LPDHVEI 198
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI+ P G + LPD+ V E
Sbjct: 181 KIIPP-------GAR--LPDDFEVEE 197
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
Length = 312
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ V E
Sbjct: 181 KI-IP--------PGAELPDDFEVSE 197
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKE 89
KI +P P LPD+ V ++P+E
Sbjct: 181 KI-IP--------PGAELPDDFEVNEDMDPEE 203
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI +P P LPD+ V E
Sbjct: 181 KI-IP--------PGAELPDDFGVHE 197
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V+SGK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KI+ P G K LPD+ + E
Sbjct: 181 KIIPP-------GAK--LPDDFEIEE 197
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGVDV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNV---LEPKE 89
KI +P P LPD+ V ++P+E
Sbjct: 181 KI-IP--------PGAELPDDFEVNEDMDPEE 203
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMK 25
MESGAKGCEVVVSGKLRGQRAKSMK
Sbjct: 123 MESGAKGCEVVVSGKLRGQRAKSMK 147
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMK 25
MESGAKGCEVVVSGKLRGQRAKSMK
Sbjct: 121 MESGAKGCEVVVSGKLRGQRAKSMK 145
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+G E+ ++GK+ G R+++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTI 95
+I +P P LPD+ + +E+V+ ++
Sbjct: 181 RI-IP--------PDAELPDDFRI---QEDVDTSV 203
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN 39
MES AKGC+V+VS K GQRAKSMKFV+GLM GDP N
Sbjct: 129 MESRAKGCKVMVSEKHLGQRAKSMKFVNGLM---GDPVN 164
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGA G E++++GKLR +R+ + K+ DG++ +G P V A V L+ G+ GI+V
Sbjct: 115 MRSGALGAEIIIAGKLRSERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQV 174
Query: 61 KIML 64
KI +
Sbjct: 175 KIAI 178
>gi|170036208|ref|XP_001845957.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878755|gb|EDS42138.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 281
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 110 EIPVASVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPAFPQKKLPFKTASLY 169
+P S LG KIMLPWD GK PK+PLP+NV V+EPK+E+ P K +L
Sbjct: 76 RVPRWSCLG---KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTPGTK-----NNLK 127
Query: 170 LAGMLIAIWMSVQSLMGANKNPEDKPYLFRIKSTPGQNQTHNLYH 214
L G + +SVQ P++ FR+ G N +
Sbjct: 128 LGGGFTS--LSVQDNRVTGYRPKNLKVPFRLTEVYGWNNRQKRFR 170
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 52 RQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
R LG KIMLPWD GK PK+PLP+NV V+EPK+E+ P ++
Sbjct: 79 RWSCLG---KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTPGTK 123
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E+V++GK+ G R++ KF G + H+G+P + V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIVLAGKVTGARSRIEKFNRGYIKHNGEPADTVVDEGQGVAVMKLGTIGVTV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
KI +P P LPD+ + E E
Sbjct: 181 KI-IP--------PGAQLPDDFAIAEDAE 200
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V+
Sbjct: 132 EAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVR 191
Query: 62 I 62
I
Sbjct: 192 I 192
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GA+G E+V+SGKL +RAK K+ G + SG+ V A HVLL+ G+ GI++
Sbjct: 132 EAGARGFELVISGKLSTERAKFEKYKVGKVYKSGNDSMKTVRRAAVHVLLKPGIYGIRIA 191
Query: 62 I 62
I
Sbjct: 192 I 192
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V+
Sbjct: 132 EAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVR 191
Query: 62 I 62
I
Sbjct: 192 I 192
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GAKG E+VVSGKL +RA+ K G + G + V A HVLL+ G+ GI+V+
Sbjct: 134 EAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVR 193
Query: 62 I 62
I
Sbjct: 194 I 194
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G E++++GK+ G R++ KF G + H+G+P V+ +++ G +G+ V
Sbjct: 121 MDAGALGAEIILAGKVTGARSRVEKFNRGYIKHNGEPAQSIVDEGQGVAVMKLGTIGVNV 180
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPK--EEVNPTIPSSQV 100
KI+ P G K LPD+ + + E V T+ S V
Sbjct: 181 KIIPP-------GAK--LPDDFEIEDDADPEAVEQTVESEGV 213
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+ +GA G ++V+SGKLR +RA+ K G + +G V+ A HV L+ GVLGI+V
Sbjct: 122 LNAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEV 181
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
I+ P KP D V + +P+E
Sbjct: 182 MIV---------KPAKP-SDYVRIKQPEE 200
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5.1|RS3_THEAC RecName: Full=30S ribosomal protein S3
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+++GAKG + +SGK+ G+RA+ KF+ G + +SG+P + + T L+ G+LG+ V
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTV 179
Query: 61 KIMLP 65
KI+ P
Sbjct: 180 KILNP 184
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 5 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM- 63
A+G + + GK+ G+RA++ KF+ G + +SG+P V T +L+ G +GI V+++
Sbjct: 130 ARGVLIRIGGKISGERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIYVRLLR 189
Query: 64 ----LPWDSTGKTGPKKPLPDNVNVLEPKEEV 91
LP + + T K P+PD ++ E +EV
Sbjct: 190 QDYHLPDEISINTERKIPVPDKKSMPEESKEV 221
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G E+V+SGKL +RA+ K G +I +G+ + Y + A + L G++G++V
Sbjct: 122 MEAGAVGVEIVISGKLSRERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKLPLGIIGVEV 181
Query: 61 KIMLP 65
+I+ P
Sbjct: 182 RIIRP 186
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EV++SGKL +RAK K +G++ SG + V+ A +L+ GV G+++
Sbjct: 122 MNAGALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEI 181
Query: 61 KIMLPWDSTGKT----GPKKPLPDNVNV 84
I P S K PK P + V V
Sbjct: 182 LITKPMKSVDKIELREQPKGPGENMVTV 209
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GAKGC VV+SGKL G R ++ KF G + + GD +++ + + G +G V
Sbjct: 124 MDAGAKGCLVVLSGKLTGSRNRTQKFQAGHIKYCGDTAIQFMDVGKAVCVKKLGTIGCTV 183
Query: 61 KIMLP 65
IM P
Sbjct: 184 AIMRP 188
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+GA+G E+V+SGKL +RAK K+ G + +G + +A HVLL+ G+ GIK
Sbjct: 110 EAGARGFELVISGKLSTERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLKPGIYGIKAT 169
Query: 62 I 62
I
Sbjct: 170 I 170
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M SGA G EV+VSGKL +RAK K +G + SG ++ A +L+ GV G++V
Sbjct: 122 MSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEV 181
Query: 61 KIMLPWDSTGK 71
I P S K
Sbjct: 182 VITKPTRSIDK 192
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 23 SMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
++F+ G S DP N YV+T+ RHVLLRQGVLGIKVK
Sbjct: 123 ELRFIMGPKAVSEDPVNYYVDTSARHVLLRQGVLGIKVK 161
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+ GAKG EV +SGKL +R++ K+V G++ +G V VLL+ G+ GI+V
Sbjct: 128 MDGGAKGAEVTISGKLTSERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLKPGLYGIEV 187
Query: 61 KIMLP 65
+I P
Sbjct: 188 RITPP 192
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G E+++SGKL +RA+ K +G++ SG ++ A +L+ G+ G++V
Sbjct: 122 MNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEV 181
Query: 61 KIMLPWDSTGKTGPKK--PLPDNVNV 84
I P K K+ +P V+V
Sbjct: 182 VITKPLKIEDKINLKESPSVPQEVSV 207
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G E+++SGKL +RA+ K +G++ SG ++ A +L+ G+ G++V
Sbjct: 109 MNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEV 168
Query: 61 KIMLPWDSTGKTGPKK--PLPDNVNV 84
I P K K+ +P V+V
Sbjct: 169 VITKPLKIEDKISLKESPSVPQEVSV 194
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA GCE+ +SGKLRG R + K V+G + H G + V+ + GV+G+ V
Sbjct: 120 MGAGALGCEITMSGKLRGPRGRVEKMVEGYIKHCGSVAEEIVDKGYSIAQKKTGVIGVMV 179
Query: 61 KIMLP 65
I+ P
Sbjct: 180 WIVAP 184
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EV+VSGK+ +RAK K +G++ +G+ + V+ A L+ G+ G++V
Sbjct: 122 MNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNSLDVMVDRAIAIATLKMGIYGVEV 181
Query: 61 KIMLPWDSTGKTGPKKPLPDN 81
I P + K ++ P +
Sbjct: 182 IITKPLKNIDKMSLRELTPTS 202
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1.1|RS3_THEVO RecName: Full=30S ribosomal protein S3
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+++GA+G + +SGK+ G+RA+ KF+ G + +SG+P + + L+ G+LG+ V
Sbjct: 120 IDAGARGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTV 179
Query: 61 KIMLP 65
KI+ P
Sbjct: 180 KILNP 184
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3 [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+ +G EV++SGKL +R++ K+ G++I +G + V A VLL+ G+ ++V+
Sbjct: 130 EANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVR 189
Query: 62 IMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKP 104
+ LP P L D V P+E + Q+ +KP
Sbjct: 190 V-LP--------PDAKLSDRFEVKSPEE-----VQVKQIENKP 218
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M+ GAKG EV +SGKL +R++ K++ G + +G V VLL+ G+ GI+V
Sbjct: 128 MDGGAKGAEVTISGKLTSERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLKPGLYGIEV 187
Query: 61 KIMLP 65
+I P
Sbjct: 188 RITPP 192
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EV+VSGK+ +RAK K +G++ +G+ + V+ A L+ G+ G++V
Sbjct: 122 MNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLKMGIYGVQV 181
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDK 103
I P +T K L + E + + +++D+
Sbjct: 182 VITKPL----RTVDKILLKEKTETTSESTEAEVRVTNVRIIDE 220
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G E+ +SGKL +RA+ KF G + SG ++ V+ A+ + L +GV+G+ V
Sbjct: 123 MSNGALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDV 182
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPS 97
I+ P GK G D+V + + +EEV + +
Sbjct: 183 IIVKP----GKPG------DHVRI-KSEEEVKDVVDA 208
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+G G ++ VSGKL G R ++ KF G + GD ++ V+ R + G +G+KV+
Sbjct: 139 ETGVIGAQIEVSGKLSGNRGRTEKFSFGYVKRCGDTADEQVDRGYRLARTKPGAIGVKVR 198
Query: 62 IM 63
IM
Sbjct: 199 IM 200
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EV+VSGK+ +RAK K +G++ +G+ + V+ A L+ G+ G++V
Sbjct: 122 MNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEV 181
Query: 61 KIMLPWDSTGKTGPKKP 77
I P + K K+
Sbjct: 182 VITKPLRTIDKISLKQT 198
>gi|384487444|gb|EIE79624.1| hypothetical protein RO3G_04329 [Rhizopus delemar RA 99-880]
Length = 46
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 24 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 67
MKFVDG M+HSG+ +++ TA HV L Q VLGIKVK L D
Sbjct: 1 MKFVDGFMMHSGNFAREFMTTAVCHVDLCQAVLGIKVKSRLNND 44
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC V++SGK+ G R + KF G + G+ ++++T + + G +G V
Sbjct: 124 MDAGARGCLVILSGKITGPRHRVEKFQQGHVKFCGETALEFMDTGFSTAVKKLGTIGCTV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE 86
KIM P G K LP ++++E
Sbjct: 184 KIMRP-------GVK--LPHEIDIIE 200
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
+E+GAKGC ++++GKL G R ++ KF+ G + G+ +++ +++ G +G V
Sbjct: 128 IEAGAKGCLIIIAGKLTGSRHRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCTV 187
Query: 61 KIMLP 65
IM P
Sbjct: 188 AIMKP 192
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC VV+SGK+ G R + KF G + G+ ++++ + + G +G V
Sbjct: 124 MDAGARGCLVVLSGKITGARHRVEKFQQGHIKFCGETALEFMDIGFSTAVKKLGTIGCTV 183
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-------PKEEVNPTIPSSQVLDKPLAKLGEIPV 113
+IM P LP + + E P EV S + D+ L+ + E P
Sbjct: 184 RIMR---------PDAKLPHEIIITERADSGLPPLAEVAVFEVSDEEADEELSAVPEEPK 234
Query: 114 ASVLGI 119
A G+
Sbjct: 235 ADAEGV 240
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC V++SGK+ G R + KF G + G+ ++++T + + G +G V
Sbjct: 124 MDAGARGCLVILSGKITGPRHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTV 183
Query: 61 KIMLP 65
+IM P
Sbjct: 184 RIMRP 188
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 9 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDS 68
E+++SGK+ +RA+ KF G + +G+ V+ A H LL+ G+ G+KV I+ P +
Sbjct: 130 EIIISGKITSERARYEKFRAGKIYKTGEQATYIVDKAVAHALLKPGIYGVKVIIVKPERT 189
Query: 69 TGKTGPKKPLPDNVN------VLEPKEEVNPTIPS 97
K P +N E KEE+ I +
Sbjct: 190 KDSIIIKSPEEIGINKESTAKEKEQKEEMGEQIST 224
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GA G ++ +SGKLRG R+ K G++ +G V+ HV G++GI++
Sbjct: 121 MEGGAMGVQITISGKLRGDRSAFEKHTQGILPRAGHHAEIVVDEDIAHVQTAMGLIGIRI 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRA 21
MESGAKGCEVVVSGKLRGQRA
Sbjct: 127 MESGAKGCEVVVSGKLRGQRA 147
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G ++ +SGKLRG R+ K G++ +G V+ HV G++GI++
Sbjct: 121 MENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVETAMGLIGIRI 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQRA 21
MESGAKGCEVVVSGKLRGQRA
Sbjct: 127 MESGAKGCEVVVSGKLRGQRA 147
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC V++SGK+ G R + KF G + + G+ +++ + + G +G V
Sbjct: 123 MDAGARGCIVILSGKITGARHRVEKFQKGHIKYCGETALQFMDVGFSTAVKKLGTVGCTV 182
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLEPKE 89
+IM P G K LP + + E E
Sbjct: 183 RIMRP-------GTK--LPHEIAIQERHE 202
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G EVVVSGK+ +RAK K +G + +G+ ++ A L+ G+ G+++
Sbjct: 122 MNAGALGAEVVVSGKITSERAKYEKLKEGTVYKTGNSLETMIDRAVAIATLKPGIYGVEI 181
Query: 61 KIMLP 65
I P
Sbjct: 182 IIAKP 186
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME GA G ++ +SGKLRG R+ K G++ +G V+ HV G++GI++
Sbjct: 121 MEGGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVKTAMGLIGIRI 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|170061556|ref|XP_001866284.1| ribosomal protein S3e [Culex quinquefasciatus]
gi|167879748|gb|EDS43131.1| ribosomal protein S3e [Culex quinquefasciatus]
Length = 77
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 41 YVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQ 99
YV+T HVLLR GVLG+KVK ML WD+ L DN++ +EP E P++
Sbjct: 2 YVDT--HHVLLRPGVLGVKVKTMLLWDAK----VNMTLSDNISKVEPNHETMSNTPAAN 54
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC +++SGK+ G R + KF G + G+ +++ + + G +G V
Sbjct: 125 MDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTV 184
Query: 61 KIMLPWDSTGKTGPKKPLPDNVNVLE-------PKEEVN 92
+IM P G K LP ++++E P EEV+
Sbjct: 185 RIMRP-------GVK--LPHEIDIIERVDSGLAPIEEVS 214
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G ++ +SGKLRG R+ K G++ +G V HV G++GI++
Sbjct: 121 MENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVNTAMGLIGIRI 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
ME+GA G ++ +SGKLRG R+ K G++ +G V HV G++GI++
Sbjct: 121 MENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVGTAMGLIGIRI 180
Query: 61 KI 62
+I
Sbjct: 181 RI 182
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA G ++ +SGKLRG R+ K G++ +G V+ HV G++GI++
Sbjct: 121 MDNGAMGVQITISGKLRGDRSAFEKHSAGILPRAGHHAEVIVDEDIAHVKTAMGLIGIRI 180
Query: 61 KIML 64
+I +
Sbjct: 181 RIAI 184
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQR 20
MESGAKGCEVVVSGKLRGQR
Sbjct: 92 MESGAKGCEVVVSGKLRGQR 111
>gi|152060885|sp|Q74MZ4.2|RS3_NANEQ RecName: Full=30S ribosomal protein S3
Length = 230
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G E+V++G+L GQR K+ +F G + +G ++ A L+ GV GI V
Sbjct: 121 MNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHV 180
Query: 61 KIMLP 65
I+ P
Sbjct: 181 TILKP 185
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M++GA+GC V +SGK+ G R + KF G + + G+ ++ + + G +G V
Sbjct: 123 MDAGARGCIVTLSGKITGARHRVEKFQKGHIKYCGETALQLMDVGFSTAVKKLGTIGCTV 182
Query: 61 KIM-----LPWDSTGKTGPKKPLPDNV 82
+IM LP + T + + LPD V
Sbjct: 183 RIMRPGAKLPHEITIQERSESGLPDLV 209
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA G E+V++G+L GQR K+ +F G + +G ++ A L+ GV GI V
Sbjct: 127 MNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHV 186
Query: 61 KIMLP 65
I+ P
Sbjct: 187 TILKP 191
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3 [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1.1|RS3_PICTO RecName: Full=30S ribosomal protein S3
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 5 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM 63
A G + + GK+ G+RA++ KF+ G + +SG+P V L+ G++G+ V+I+
Sbjct: 124 APGVLIRIGGKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSVRIL 182
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 1 MESGAKGCEVVVSGKLRGQ 19
MESGAKGCEVVVSGKLRGQ
Sbjct: 127 MESGAKGCEVVVSGKLRGQ 145
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 1 MESGAKGCEVVVSGKL--RGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 58
ME+GA G E+++SGKL +G RAKS++ G + +GD N VN + G +G+
Sbjct: 121 MENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAGDVIN-LVNKGVATAYPKYGAIGV 179
Query: 59 KVKIMLP 65
V+I+ P
Sbjct: 180 VVRIVPP 186
>gi|193875764|gb|ACF24518.1| 40S ribosomal protein S3 [Gymnochlora stellata]
Length = 255
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 39/63 (61%)
Query: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 60
M +GA+GC + + G + +R ++++F G + ++G + + ++ ++GV+GIK+
Sbjct: 164 MRNGARGCLIQIKGAHKSKRTRTVRFTRGFVSYAGGANARWTDGYHFNLKKKRGVIGIKI 223
Query: 61 KIM 63
KI+
Sbjct: 224 KIL 226
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+G G EV ++GKL G R ++ KF G + G+ + V + + G +G+KV+
Sbjct: 121 EAGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENVQKGYQLARTKPGAIGVKVR 180
Query: 62 IM 63
+M
Sbjct: 181 VM 182
>gi|359417827|ref|ZP_09209891.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358031817|gb|EHK00657.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 96
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 2 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 61
E+G G EV ++GKL G R ++ KF G + G+ + V + + G +G+KV+
Sbjct: 3 EAGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENVQKGYQLARTKPGAIGVKVR 62
Query: 62 IM 63
+M
Sbjct: 63 VM 64
>gi|325282646|ref|YP_004255187.1| 30S ribosomal protein S3 [Deinococcus proteolyticus MRP]
gi|324314455|gb|ADY25570.1| ribosomal protein S3 [Deinococcus proteolyticus MRP]
Length = 259
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESGA+GC+V++SG+L G ++A++ K ++G + +H+ DY TAT G LGI
Sbjct: 143 MESGARGCKVILSGRLGGAEQARTEKVLEGRVPLHTLRADIDY-GTATASTTY--GQLGI 199
Query: 59 KVKIM 63
KV +
Sbjct: 200 KVLVF 204
>gi|386857792|ref|YP_006261969.1| 30S ribosomal protein S3 [Deinococcus gobiensis I-0]
gi|380001321|gb|AFD26511.1| 30S ribosomal protein S3 [Deinococcus gobiensis I-0]
Length = 248
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESGA+G +VV+SG+L G ++A++ K ++G + +H+ DY R G+LGI
Sbjct: 143 MESGARGVKVVLSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTALARTTY---GILGI 199
Query: 59 KVKIMLPWDSTGKT 72
KV + GKT
Sbjct: 200 KVLVFNGEVIGGKT 213
>gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1]
gi|27734542|sp|Q9RXJ6.1|RS3_DEIRA RecName: Full=30S ribosomal protein S3
gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1]
Length = 249
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESGA+G +V++SG+L G ++A++ K ++G + +H+ DY R G+LGI
Sbjct: 143 MESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTALARTTY---GILGI 199
Query: 59 KVKIMLPWDSTGKT 72
KV + GKT
Sbjct: 200 KVLVFNGEVIGGKT 213
>gi|429220614|ref|YP_007182258.1| 30S ribosomal protein S3 [Deinococcus peraridilitoris DSM 19664]
gi|429131477|gb|AFZ68492.1| ribosomal protein S3, bacterial type [Deinococcus peraridilitoris
DSM 19664]
Length = 249
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESGA+G +V+SG+L G ++A++ K ++G + +H+ DY R G+LG+
Sbjct: 143 MESGARGVRIVLSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTALARTTY---GILGV 199
Query: 59 KVKIMLPWDSTGKT 72
KV + GKT
Sbjct: 200 KVMVFNGEIIGGKT 213
>gi|376315874|emb|CCF99281.1| 30S ribosomal protein S3 [uncultured Flavobacteriia bacterium]
Length = 252
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
M +GA+G +V +SG+L G + A+S +F DG +H+ DY A + L G +GI
Sbjct: 141 MRAGAEGIKVRISGRLNGAEMARSEEFKDGRTPLHTFRADIDY---ALQEALTVYGKIGI 197
Query: 59 KVKIMLPWDSTGKTGPKKPLPDNVNV 84
KV W G+ K+ L NV V
Sbjct: 198 KV-----WICKGEVLGKRDLSPNVGV 218
>gi|320335517|ref|YP_004172228.1| 30S ribosomal protein S3 [Deinococcus maricopensis DSM 21211]
gi|319756806|gb|ADV68563.1| ribosomal protein S3 [Deinococcus maricopensis DSM 21211]
Length = 247
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
MESGA+G +VV+SG+L G ++A++ K ++G + +H+ DY R G++GI
Sbjct: 143 MESGARGVKVVMSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTALARTTY---GIIGI 199
Query: 59 KVKIMLPWDSTGKT 72
KV + GKT
Sbjct: 200 KVLVFNGEVIGGKT 213
>gi|429849777|gb|ELA25120.1| protein rds1 [Colletotrichum gloeosporioides Nara gc5]
Length = 453
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 66 WDSTGKTGPKKPLPDNVNVLEPKEEVNPTIPSSQVLDKPLAKLGEIPVASVLGIKVKIML 125
W +T TG VN +P+E+ NP I SQ PL+ G ++ L
Sbjct: 305 WANTAATGNITDSESCVNATDPEEDCNPAI--SQNRTMPLSYAGR-----------QVFL 351
Query: 126 PWDSTGK-TGPKKPLPDNVNVLEPK 149
WD+ G+ GP + NV EPK
Sbjct: 352 QWDAPGQPVGPNNSYITSTNVKEPK 376
>gi|260424860|ref|ZP_05779019.1| ribosomal protein S3 [Dialister invisus DSM 15470]
gi|260403417|gb|EEW96964.1| ribosomal protein S3 [Dialister invisus DSM 15470]
Length = 248
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 1 MESGAKGCEVVVSGKLRGQR-AKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
M GAKG +V VSG+L G A+S + +G + + + DY AT H G +GI
Sbjct: 132 MRMGAKGIKVTVSGRLGGAEIARSESYREGSIPLQTLRANIDYA-VATAHTTY--GAIGI 188
Query: 59 KVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVN 92
KV W G+ P + + +N N+ K+ N
Sbjct: 189 KV-----WIYKGELAPGQTVDENENIRTSKDRGN 217
>gi|374386806|ref|ZP_09644303.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
gi|373223367|gb|EHP45717.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
Length = 242
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
M GA+G +V++SG+L G + A++ F +G + +H+ DY A L G+LGI
Sbjct: 141 MRMGAEGIKVLISGRLNGAEMARAEIFKEGRIPLHTFRADIDY---AQAEALTTYGLLGI 197
Query: 59 KVKIMLPWDSTGKTGPKKPLPDNVNVLEPKEEVNPT 94
KV W G+ K+ L N +VL +E N
Sbjct: 198 KV-----WICKGEVYGKRELVPN-SVLASRETRNAA 227
>gi|325299126|ref|YP_004259043.1| 30S ribosomal protein S3 [Bacteroides salanitronis DSM 18170]
gi|324318679|gb|ADY36570.1| ribosomal protein S3 [Bacteroides salanitronis DSM 18170]
Length = 243
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
M GA+G +V++SG+L G + A+S + +G +H+ DY +T L + G+LGI
Sbjct: 141 MRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRADIDYCHT---EALTKVGLLGI 197
Query: 59 KVKIMLPWDSTGKTGPKKPLPDN 81
KV W G+ K+ L N
Sbjct: 198 KV-----WICRGEVYGKRELAPN 215
>gi|363542982|ref|ZP_09312565.1| 30S ribosomal protein S3 [Mycoplasma ovipneumoniae SC01]
Length = 227
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGI 58
+++GAKG + +VSG+L G + A+S + +G M +H+ +Y + G+LG+
Sbjct: 146 LKAGAKGVKTLVSGRLNGVEMARSEGYAEGEMKLHTLRQNVEYATAIAKTTY---GILGV 202
Query: 59 KVKIMLPWDSTGKTGPK 75
KV W S G+T K
Sbjct: 203 KV-----WVSLGETRQK 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,607,058,484
Number of Sequences: 23463169
Number of extensions: 155287272
Number of successful extensions: 272385
Number of sequences better than 100.0: 888
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 270674
Number of HSP's gapped (non-prelim): 1659
length of query: 214
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 78
effective length of database: 9,168,204,383
effective search space: 715119941874
effective search space used: 715119941874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)