BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17952
(804 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/401 (59%), Positives = 272/401 (67%), Gaps = 74/401 (18%)
Query: 130 YDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREI 189
+ G +D G GSLKDP++AELF K+DPEK+F DLREIGHGSFGAVY+AR + + E+
Sbjct: 22 FQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEV 81
Query: 190 VAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS 249
VAIKKMSY GKQ EKW DI+KE+RFL++L+HPNTI+YRGCYLR+HTAWLVMEYCLGSAS
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 141
Query: 250 DIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLN 309
D++EVH K+PL+E EIAA+ G L+GL
Sbjct: 142 DLLEVH---------------------------------KKPLQEVEIAAVTHGALQGLA 168
Query: 310 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEG 369
YLHS IHRDVKAGNILL+E G VKL DFGSASI PAN FVGTPYWMAPEVILAMDEG
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 370 QYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTA 429
QYDGKVDVWSLGITCIELAERKPP FNMNAMSALYHIAQN++P LQS W
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---------- 278
Query: 430 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHD 489
S+ F +FV SCL K P DRP+S LL H
Sbjct: 279 -------------------------------SEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307
Query: 490 LVTRPRSPSVLVDLIRRTKAAVRDLDNLNYRKMKKILMADG 530
V R R P+V++DLI+RTK AVR+LDNL YRKMKKIL +
Sbjct: 308 FVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKILFQEA 348
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 109/136 (80%), Positives = 121/136 (88%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
L++L+HPNTI+YRGCYLR+HTAWLVMEYCLGSASD++EVHK+PL+E EIAA+ G L+G
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMD 126
L YLHS IHRDVKAGNILL+E G VKL DFGSASI PAN FVGTPYWMAPEVILAMD
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD 226
Query: 127 EGQYDGKVDVWSLGIT 142
EGQYDGKVDVWSLGIT
Sbjct: 227 EGQYDGKVDVWSLGIT 242
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVMEYCLGSASD++EVHK+PL+E EIAA+ G L+GL YLHS IHRDVKAGNILL+E
Sbjct: 131 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 190
Query: 676 GTVKL 680
G VKL
Sbjct: 191 GLVKL 195
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/383 (60%), Positives = 263/383 (68%), Gaps = 74/383 (19%)
Query: 148 DPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA 207
DP++AELF K+DPEK+F DLREIGHGSFGAVY+AR + + E+VAIKKMSY GKQ EKW
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 60
Query: 208 DILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMG 267
DI+KE+RFL++L+HPNTI+YRGCYLR+HTAWLVMEYCLGSASD++EVH
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH------------ 108
Query: 268 NRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 327
K+PL+E EIAA+ G L+GL YLHS IHRDVKAGNIL
Sbjct: 109 ---------------------KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL 147
Query: 328 LTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
L+E G VKL DFGSASI PAN FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL
Sbjct: 148 LSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 388 AERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHI 447
AERKPP FNMNAMSALYHIAQN++P LQS W
Sbjct: 208 AERKPPLFNMNAMSALYHIAQNESPALQSGHW---------------------------- 239
Query: 448 AQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRT 507
S+ F +FV SCL K P DRP+S LL H V R R P+V++DLI+RT
Sbjct: 240 -------------SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRT 286
Query: 508 KAAVRDLDNLNYRKMKKILMADG 530
K AVR+LDNL YRKMKKIL +
Sbjct: 287 KDAVRELDNLQYRKMKKILFQEA 309
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 109/136 (80%), Positives = 121/136 (88%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
L++L+HPNTI+YRGCYLR+HTAWLVMEYCLGSASD++EVHK+PL+E EIAA+ G L+G
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMD 126
L YLHS IHRDVKAGNILL+E G VKL DFGSASI PAN FVGTPYWMAPEVILAMD
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD 187
Query: 127 EGQYDGKVDVWSLGIT 142
EGQYDGKVDVWSLGIT
Sbjct: 188 EGQYDGKVDVWSLGIT 203
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVMEYCLGSASD++EVHK+PL+E EIAA+ G L+GL YLHS IHRDVKAGNILL+E
Sbjct: 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151
Query: 676 GTVKL 680
G VKL
Sbjct: 152 GLVKL 156
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 169/352 (48%), Gaps = 86/352 (24%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
+ PE++F+ L ++G GS+G+VY A + +IVAIK++ +I+KEI ++
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQ 79
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
Q P+ ++Y G Y ++ W+VMEYC GS SDII +
Sbjct: 80 QCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR--------------------- 118
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L E+EIA I L+GL YLH + +IHRD+KAGNILL G KL
Sbjct: 119 ------------NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166
Query: 337 ADFGSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
ADFG A N +GTP+WMAPEVI E Y+ D+WSLGIT IE+AE KP
Sbjct: 167 ADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI---QEIGYNCVADIWSLGITAIEMAEGKP 223
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
PY +++ M A++ I N P RKP
Sbjct: 224 PYADIHPMRAIFMIPTNPPPTF----------------RKPEL----------------- 250
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLI 504
WSD F FV CL K+P R ++ +LL H V + S+L DLI
Sbjct: 251 -------WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLI 295
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 89/142 (62%), Gaps = 8/142 (5%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVL 64
S+++Q P+ ++Y G Y ++ W+VMEYC GS SDII + + L E+EIA I L
Sbjct: 76 SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL 135
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFVGTPYWMAPE 120
+GL YLH + +IHRD+KAGNILL G KLADFG A N +GTP+WMAPE
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 121 VILAMDEGQYDGKVDVWSLGIT 142
VI E Y+ D+WSLGIT
Sbjct: 196 VI---QEIGYNCVADIWSLGIT 214
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEYC GS SDII + + L E+EIA I L+GL YLH + +IHRD+KAGNILL
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT 160
Query: 675 TGTVKL 680
G KL
Sbjct: 161 EGHAKL 166
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 168/361 (46%), Gaps = 81/361 (22%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP +++E + E+G G+FG VY A+ ++E A+ + + E+ D + EI L
Sbjct: 16 DPNEVWEIVGELGDGAFGKVYKAK---NKETGALAAAKVIETKSEEELEDYIVEIEILAT 72
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HP ++ G Y D W+++E+C G A D I +
Sbjct: 73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL---------------------- 110
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
R L E +I +C +L LN+LHS IHRD+KAGN+L+T G ++LAD
Sbjct: 111 ----------DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLAD 160
Query: 339 FGSASIKCPA----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERKP 392
FG ++ +SF+GTPYWMAPEV++ M + YD K D+WSLGIT IE+A+ +P
Sbjct: 161 FGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
P+ +N M L IA++D P L
Sbjct: 221 PHHELNPMRVLLKIAKSDPPTL-------------------------------------- 242
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVR 512
L S WS F F+ L KNP RPS+ +LL H V+ S L +L+ KA V
Sbjct: 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVM 300
Query: 513 D 513
+
Sbjct: 301 E 301
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HP ++ G Y D W+++E+C G A D I + R L E +I +C +L
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE 128
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA----NSFVGTPYWMAPEV 121
LN+LHS IHRD+KAGN+L+T G ++LADFG ++ +SF+GTPYWMAPEV
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 188
Query: 122 IL--AMDEGQYDGKVDVWSLGIT 142
++ M + YD K D+WSLGIT
Sbjct: 189 VMCETMKDTPYDYKADIWSLGIT 211
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D I + R L E +I +C +L LN+LHS IHRD+KAGN+L+T
Sbjct: 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 152
Query: 675 TGTVKL 680
G ++L
Sbjct: 153 EGDIRL 158
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 168/361 (46%), Gaps = 81/361 (22%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP +++E + E+G G+FG VY A+ ++E A+ + + E+ D + EI L
Sbjct: 8 DPNEVWEIVGELGDGAFGKVYKAK---NKETGALAAAKVIETKSEEELEDYIVEIEILAT 64
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HP ++ G Y D W+++E+C G A D I +
Sbjct: 65 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL---------------------- 102
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
R L E +I +C +L LN+LHS IHRD+KAGN+L+T G ++LAD
Sbjct: 103 ----------DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLAD 152
Query: 339 FGSASIKCPA----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERKP 392
FG ++ +SF+GTPYWMAPEV++ M + YD K D+WSLGIT IE+A+ +P
Sbjct: 153 FGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
P+ +N M L IA++D P L
Sbjct: 213 PHHELNPMRVLLKIAKSDPPTL-------------------------------------- 234
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVR 512
L S WS F F+ L KNP RPS+ +LL H V+ S L +L+ KA V
Sbjct: 235 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVM 292
Query: 513 D 513
+
Sbjct: 293 E 293
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HP ++ G Y D W+++E+C G A D I + R L E +I +C +L
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE 120
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA----NSFVGTPYWMAPEV 121
LN+LHS IHRD+KAGN+L+T G ++LADFG ++ +SF+GTPYWMAPEV
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 180
Query: 122 IL--AMDEGQYDGKVDVWSLGIT 142
++ M + YD K D+WSLGIT
Sbjct: 181 VMCETMKDTPYDYKADIWSLGIT 203
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D I + R L E +I +C +L LN+LHS IHRD+KAGN+L+T
Sbjct: 85 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 144
Query: 675 TGTVKL 680
G ++L
Sbjct: 145 EGDIRL 150
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 169/358 (47%), Gaps = 88/358 (24%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
K DPE++F L +IG GSFG V+ ++++VAIK + + + +EI L
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVL 74
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKC 275
Q P +Y G YL+D W++MEY G SA D++E
Sbjct: 75 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---------------------- 112
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E G VK
Sbjct: 113 -------------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159
Query: 336 LADFGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
LADFG A + N FVGTP+WMAPEVI + YD K D+WSLGIT IEL
Sbjct: 160 LADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL---- 212
Query: 392 PPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
A +PP+ ++ M L+ I +N+
Sbjct: 213 -------------------------------------ARGEPPHSELHPMKVLFLIPKNN 235
Query: 452 TPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLIRRTK 508
P L+ ++S FV +CL K P+ RP++ LL H + R + S L +LI R K
Sbjct: 236 PPTLEG-NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYK 292
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVL 64
++L Q P +Y G YL+D W++MEY G SA D++E PL E +IA I +L
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 129
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPE 120
+GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N FVGTP+WMAPE
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 189
Query: 121 VILAMDEGQYDGKVDVWSLGIT 142
VI + YD K D+WSLGIT
Sbjct: 190 VI---KQSAYDSKADIWSLGIT 208
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++MEY G SA D++E PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 97 IIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154
Query: 675 TGTVKL 680
G VKL
Sbjct: 155 HGEVKL 160
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 169/356 (47%), Gaps = 88/356 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DPE++F L +IG GSFG V+ ++++VAIK + + + +EI L Q
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQ 61
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
P +Y G YL+D W++MEY G SA D++E
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------------------------ 97
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E G VKLA
Sbjct: 98 -----------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 338 DFGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG A + N+FVGTP+WMAPEVI + YD K D+WSLGIT IELA +
Sbjct: 147 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIELARGE-- 201
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
PP+ ++ M L+ I +N+ P
Sbjct: 202 ---------------------------------------PPHSELHPMKVLFLIPKNNPP 222
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLIRRTK 508
L+ ++S FV +CL K P+ RP++ LL H + R + S L +LI R K
Sbjct: 223 TLEG-NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYK 277
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 10/142 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVL 64
++L Q P +Y G YL+D W++MEY G SA D++E PL E +IA I +L
Sbjct: 57 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 114
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPE 120
+GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N+FVGTP+WMAPE
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 121 VILAMDEGQYDGKVDVWSLGIT 142
VI + YD K D+WSLGIT
Sbjct: 175 VI---KQSAYDSKADIWSLGIT 193
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++MEY G SA D++E PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 82 IIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 675 TGTVKL 680
G VKL
Sbjct: 140 HGEVKL 145
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 168/356 (47%), Gaps = 88/356 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DPE++F L +IG GSFG V+ ++++VAIK + + + +EI L Q
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQ 61
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
P +Y G YL+D W++MEY G SA D++E
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------------------------ 97
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E G VKLA
Sbjct: 98 -----------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 338 DFGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG A + N FVGTP+WMAPEVI + YD K D+WSLGIT IEL
Sbjct: 147 DFGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL------ 197
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
A +PP+ ++ M L+ I +N+ P
Sbjct: 198 -----------------------------------ARGEPPHSELHPMKVLFLIPKNNPP 222
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLIRRTK 508
L+ ++S FV +CL K P+ RP++ LL H + R + S L +LI R K
Sbjct: 223 TLEG-NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYK 277
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVL 64
++L Q P +Y G YL+D W++MEY G SA D++E PL E +IA I +L
Sbjct: 57 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 114
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPE 120
+GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N FVGTP+WMAPE
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 121 VILAMDEGQYDGKVDVWSLGIT 142
VI + YD K D+WSLGIT
Sbjct: 175 VI---KQSAYDSKADIWSLGIT 193
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++MEY G SA D++E PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 82 IIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 675 TGTVKL 680
G VKL
Sbjct: 140 HGEVKL 145
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 178/380 (46%), Gaps = 97/380 (25%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP IFE + +G+G++G VY R + + ++ AIK M G + E I +EI L++
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE----IKQEINMLKK 76
Query: 219 LKH-PNTIEYRGCYLR------DHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRL 270
H N Y G +++ D WLVME+C GS +D+I+ GN
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK----------NTKGN-- 124
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LKEE IA IC +LRGL++LH IHRD+K N+LLTE
Sbjct: 125 --------------------TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE 164
Query: 331 TGTVKLADFG-SASIKCPA---NSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGIT 383
VKL DFG SA + N+F+GTPYWMAPEVI A DE YD K D+WSLGIT
Sbjct: 165 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI-ACDENPDATYDFKSDLWSLGIT 223
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSA 443
IE+AE PP +M+ M AL+ I +N P L+S W
Sbjct: 224 AIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW------------------------ 259
Query: 444 LYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT-RPRSPSV--- 499
S F F+ SCL KN + RP++ +L+ H + +P V
Sbjct: 260 -----------------SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQ 302
Query: 500 LVDLIRRTKAAVRDLDNLNY 519
L D I RTK + D Y
Sbjct: 303 LKDHIDRTKKKRGEKDETEY 322
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 90/145 (62%), Gaps = 16/145 (11%)
Query: 13 HPNTIEYRGCYLR------DHTAWLVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSGVL 64
H N Y G +++ D WLVME+C GS +D+I+ K LKEE IA IC +L
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPA---NSFVGTPYWMAPE 120
RGL++LH IHRD+K N+LLTE VKL DFG SA + N+F+GTPYWMAPE
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 199
Query: 121 VILAMDE---GQYDGKVDVWSLGIT 142
VI A DE YD K D+WSLGIT
Sbjct: 200 VI-ACDENPDATYDFKSDLWSLGIT 223
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 616 LVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
LVME+C GS +D+I+ K LKEE IA IC +LRGL++LH IHRD+K N+LLT
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 674 ETGTVKL 680
E VKL
Sbjct: 164 ENAEVKL 170
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 168/356 (47%), Gaps = 88/356 (24%)
Query: 155 FDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIR 214
F DPE++F L +IG GSFG V+ ++++VAIK + + + +EI
Sbjct: 20 FQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEIT 77
Query: 215 FLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQL 273
L Q P +Y G YL+D W++MEY G SA D++E
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-------------------- 117
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E G
Sbjct: 118 ---------------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE 162
Query: 334 VKLADFGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
VKLADFG A + N+FVGTP+WMAPEVI + YD K D+WSLGIT IEL
Sbjct: 163 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL-- 217
Query: 390 RKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQ 449
A +PP+ ++ M L+ I +
Sbjct: 218 ---------------------------------------ARGEPPHSELHPMKVLFLIPK 238
Query: 450 NDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLI 504
N+ P L+ ++S FV +CL K P+ RP++ LL H + R + S L +LI
Sbjct: 239 NNPPTLEG-NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 293
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 10/142 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVL 64
++L Q P +Y G YL+D W++MEY G SA D++E PL E +IA I +L
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 134
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPE 120
+GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N+FVGTP+WMAPE
Sbjct: 135 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 121 VILAMDEGQYDGKVDVWSLGIT 142
VI + YD K D+WSLGIT
Sbjct: 195 VI---KQSAYDSKADIWSLGIT 213
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++MEY G SA D++E PL E +IA I +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 102 IIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 159
Query: 675 TGTVKL 680
G VKL
Sbjct: 160 HGEVKL 165
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 167/355 (47%), Gaps = 86/355 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DPE++F L IG GSFG V+ ++++VAIK + + + +EI L Q
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQ 77
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
+Y G YL+ W++MEY G G+ L L+
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYL--------------------GGGSALDLLRA--- 114
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
P E +IA + +L+GL+YLHS +IHRD+KA N+LL+E G VKLAD
Sbjct: 115 -----------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLAD 163
Query: 339 FGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
FG A + N+FVGTP+WMAPEVI + YD K D+WSLGIT IELA+ +PP
Sbjct: 164 FGVAGQLTDTQIKRNTFVGTPFWMAPEVI---QQSAYDSKADIWSLGITAIELAKGEPPN 220
Query: 395 FNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPC 454
+M+ M L+ I +N+ P L
Sbjct: 221 SDMHPMRVLFLIPKNNPPTL---------------------------------------- 240
Query: 455 LQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLIRRTK 508
D++ +F F+ +CL K+P+ RP++ LL H + + + S L +LI R K
Sbjct: 241 --VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFK 293
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 88/141 (62%), Gaps = 8/141 (5%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L Q +Y G YL+ W++MEY LG S + + P E +IA + +L+
Sbjct: 73 TVLSQCDSSYVTKYYGSYLKGSKLWIIMEY-LGGGSALDLLRAGPFDEFQIATMLKEILK 131
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPEV 121
GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N+FVGTP+WMAPEV
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 191
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
I + YD K D+WSLGIT
Sbjct: 192 I---QQSAYDSKADIWSLGIT 209
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
++MEY LG S + + P E +IA + +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 98 IIMEY-LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 156
Query: 676 GTVKL 680
G VKL
Sbjct: 157 GDVKL 161
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 164/355 (46%), Gaps = 86/355 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DPE++F L IG GSFG VY ++E+VAIK + + + +EI L Q
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQ 73
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
P Y G YL+ W++MEY G G+ L LK
Sbjct: 74 CDSPYITRYFGSYLKSTKLWIIMEYL--------------------GGGSALDLLK---- 109
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
PL+E IA I +L+GL+YLHS +IHRD+KA N+LL+E G VKLAD
Sbjct: 110 ----------PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAD 159
Query: 339 FGSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
FG A + N FVGTP+WMAPEVI + YD K D+WSLGIT IEL
Sbjct: 160 FGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDFKADIWSLGITAIEL------- 209
Query: 395 FNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPC 454
A+ +PP +++ M L+ I +N P
Sbjct: 210 ----------------------------------AKGEPPNSDLHPMRVLFLIPKNSPPT 235
Query: 455 LQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR-PRSPSVLVDLIRRTK 508
L+ S F FV +CL K+P RP++ LL H +TR + S L +LI R K
Sbjct: 236 LEGQH-SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYK 289
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 88/141 (62%), Gaps = 8/141 (5%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L Q P Y G YL+ W++MEY LG S + + PL+E IA I +L+
Sbjct: 69 TVLSQCDSPYITRYFGSYLKSTKLWIIMEY-LGGGSALDLLKPGPLEETYIATILREILK 127
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPEV 121
GL+YLHS +IHRD+KA N+LL+E G VKLADFG A + N FVGTP+WMAPEV
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 187
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
I + YD K D+WSLGIT
Sbjct: 188 I---KQSAYDFKADIWSLGIT 205
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
++MEY LG S + + PL+E IA I +L+GL+YLHS +IHRD+KA N+LL+E
Sbjct: 94 IIMEY-LGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 152
Query: 676 GTVKL 680
G VKL
Sbjct: 153 GDVKL 157
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 164/361 (45%), Gaps = 82/361 (22%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
+PE +E + E+G G+FG VY A+ ++E + + + E+ D + EI L
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HPN ++ + ++ W+++E+C G A D + +
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---------------------- 128
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
+RPL E +I +C L LNYLH IHRD+KAGNIL T G +KLAD
Sbjct: 129 ----------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 339 FGSASIKCPA----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERKP 392
FG ++ +SF+GTPYWMAPEV++ + YD K DVWSLGIT IE+AE +P
Sbjct: 179 FGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
P+ +N M L IA+++ P L
Sbjct: 239 PHHELNPMRVLLKIAKSEPPTLA------------------------------------- 261
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVR 512
Q S WS F F+ CL KN R ++ +LL H VT + + +LI KA V
Sbjct: 262 ---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR-ELIAEAKAEVT 317
Query: 513 D 513
+
Sbjct: 318 E 318
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 87/143 (60%), Gaps = 7/143 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HPN ++ + ++ W+++E+C G A D + + +RPL E +I +C L
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA----NSFVGTPYWMAPEV 121
LNYLH IHRD+KAGNIL T G +KLADFG ++ +SF+GTPYWMAPEV
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 122 IL--AMDEGQYDGKVDVWSLGIT 142
++ + YD K DVWSLGIT
Sbjct: 207 VMCETSKDRPYDYKADVWSLGIT 229
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D + + +RPL E +I +C L LNYLH IHRD+KAGNIL T
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 675 TGTVKL 680
G +KL
Sbjct: 171 DGDIKL 176
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 163/359 (45%), Gaps = 82/359 (22%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
+PE +E + E+G G+FG VY A+ ++E + + + E+ D + EI L
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HPN ++ + ++ W+++E+C G A D + +
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---------------------- 128
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
+RPL E +I +C L LNYLH IHRD+KAGNIL T G +KLAD
Sbjct: 129 ----------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 339 FGSASIKCPA----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERKP 392
FG ++ +SF+GTPYWMAPEV++ + YD K DVWSLGIT IE+AE +P
Sbjct: 179 FGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
P+ +N M L IA+++ P L
Sbjct: 239 PHHELNPMRVLLKIAKSEPPTLA------------------------------------- 261
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAV 511
Q S WS F F+ CL KN R ++ +LL H VT + + +LI KA V
Sbjct: 262 ---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR-ELIAEAKAEV 316
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 87/143 (60%), Gaps = 7/143 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HPN ++ + ++ W+++E+C G A D + + +RPL E +I +C L
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA----NSFVGTPYWMAPEV 121
LNYLH IHRD+KAGNIL T G +KLADFG ++ +SF+GTPYWMAPEV
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 122 IL--AMDEGQYDGKVDVWSLGIT 142
++ + YD K DVWSLGIT
Sbjct: 207 VMCETSKDRPYDYKADVWSLGIT 229
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D + + +RPL E +I +C L LNYLH IHRD+KAGNIL T
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 675 TGTVKL 680
G +KL
Sbjct: 171 DGDIKL 176
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 162/359 (45%), Gaps = 82/359 (22%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
+PE +E + E+G G+FG VY A+ ++E + + + E+ D + EI L
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HPN ++ + ++ W+++E+C G A D + +
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---------------------- 128
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
+RPL E +I +C L LNYLH IHRD+KAGNIL T G +KLAD
Sbjct: 129 ----------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 339 FGSASIKCPA----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERKP 392
FG ++ + F+GTPYWMAPEV++ + YD K DVWSLGIT IE+AE +P
Sbjct: 179 FGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Query: 393 PYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDT 452
P+ +N M L IA+++ P L
Sbjct: 239 PHHELNPMRVLLKIAKSEPPTLA------------------------------------- 261
Query: 453 PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAV 511
Q S WS F F+ CL KN R ++ +LL H VT + + +LI KA V
Sbjct: 262 ---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR-ELIAEAKAEV 316
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HPN ++ + ++ W+++E+C G A D + + +RPL E +I +C L
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA----NSFVGTPYWMAPEV 121
LNYLH IHRD+KAGNIL T G +KLADFG ++ + F+GTPYWMAPEV
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 122 IL--AMDEGQYDGKVDVWSLGIT 142
++ + YD K DVWSLGIT
Sbjct: 207 VMCETSKDRPYDYKADVWSLGIT 229
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D + + +RPL E +I +C L LNYLH IHRD+KAGNIL T
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 675 TGTVKL 680
G +KL
Sbjct: 171 DGDIKL 176
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 153/341 (44%), Gaps = 84/341 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
+PE +E + E+G FG VY A+ ++E + + + E+ D + EI L
Sbjct: 9 NPEDFWEIIGELG--DFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
HPN ++ + ++ W+++E+C G A D + +
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---------------------- 101
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
+RPL E +I +C L LNYLH IHRD+KAGNIL T G +KLAD
Sbjct: 102 ----------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLAD 151
Query: 339 FGSASIKCPA-----NSFVGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAERK 391
FG ++ +SF+GTPYWMAPEV++ + YD K DVWSLGIT IE+AE +
Sbjct: 152 FGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
Query: 392 PPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
PP+ +N M L IA+++ P L
Sbjct: 212 PPHHELNPMRVLLKIAKSEPPTLA------------------------------------ 235
Query: 452 TPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
Q S WS F F+ CL KN R ++ +LL H VT
Sbjct: 236 ----QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 272
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 8/144 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLR 65
+L HPN ++ + ++ W+++E+C G A D + + +RPL E +I +C L
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 119
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA-----NSFVGTPYWMAPE 120
LNYLH IHRD+KAGNIL T G +KLADFG ++ +SF+GTPYWMAPE
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 121 VIL--AMDEGQYDGKVDVWSLGIT 142
V++ + YD K DVWSLGIT
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGIT 203
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+++E+C G A D + + +RPL E +I +C L LNYLH IHRD+KAGNIL T
Sbjct: 84 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 143
Query: 675 TGTVKL 680
G +KL
Sbjct: 144 DGDIKL 149
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 162/360 (45%), Gaps = 86/360 (23%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP+K + +IG G+ G VY A + + + VAI++M+ Q K I+ EI +R+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRE 73
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K+PN + Y YL W+VMEY G S +D+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------------------------- 107
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + + E +IAA+C L+ L +LHS IHRD+K+ NILL G+VKL
Sbjct: 108 ---------VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 338 DFGSASIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG + P S VGTPYWMAPEV+ Y KVD+WSLGI IE+ E +PP
Sbjct: 159 DFGFCAQITPEQSKRSXMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
Y N N + ALY IA N TP LQ N +SA+
Sbjct: 216 YLNENPLRALYLIATNGTPELQ---------------------NPEKLSAI--------- 245
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVRD 513
F F++ CL + R S+ LL H + + S L LI K A ++
Sbjct: 246 ----------FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKN 295
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
++R+ K+PN + Y YL W+VMEY G S +D+ V + + E +IAA+C L+
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQ 127
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYWMAPEV 121
L +LHS IHRD+K+ NILL G+VKL DFG + P S VGTPYWMAPEV
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+ Y KVD+WSLGI
Sbjct: 188 V---TRKAYGPKVDIWSLGI 204
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G S +D+ V + + E +IAA+C L+ L +LHS IHRD+K+ NILL
Sbjct: 94 VVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITSEHSVQSVGVG 709
G+VKL D IT E S +S VG
Sbjct: 152 DGSVKL--------TDFGFCAQITPEQSKRSXMVG 178
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 162/360 (45%), Gaps = 86/360 (23%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP+K + +IG G+ G VY A + + + VAI++M+ Q K I+ EI +R+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRE 73
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K+PN + Y YL W+VMEY G S +D+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------------------------- 107
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + + E +IAA+C L+ L +LHS IHRD+K+ NILL G+VKL
Sbjct: 108 ---------VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 338 DFGSASIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG + P S VGTPYWMAPEV+ Y KVD+WSLGI IE+ E +PP
Sbjct: 159 DFGFCAQITPEQSKRSEMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
Y N N + ALY IA N TP LQ N +SA+
Sbjct: 216 YLNENPLRALYLIATNGTPELQ---------------------NPEKLSAI--------- 245
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVRD 513
F F++ CL + R S+ LL H + + S L LI K A ++
Sbjct: 246 ----------FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKN 295
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
++R+ K+PN + Y YL W+VMEY G S +D+ V + + E +IAA+C L+
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQ 127
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYWMAPEV 121
L +LHS IHRD+K+ NILL G+VKL DFG + P S VGTPYWMAPEV
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+ Y KVD+WSLGI
Sbjct: 188 V---TRKAYGPKVDIWSLGI 204
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G S +D+ V + + E +IAA+C L+ L +LHS IHRD+K+ NILL
Sbjct: 94 VVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITSEHSVQSVGVG 709
G+VKL D IT E S +S VG
Sbjct: 152 DGSVKL--------TDFGFCAQITPEQSKRSEMVG 178
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 162/360 (45%), Gaps = 86/360 (23%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP+K + +IG G+ G VY A + + + VAI++M+ Q K I+ EI +R+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRE 73
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K+PN + Y YL W+VMEY G S +D+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------------------------- 107
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + + E +IAA+C L+ L +LHS IHRD+K+ NILL G+VKL
Sbjct: 108 ---------VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 338 DFGSASIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG + P S VGTPYWMAPEV+ Y KVD+WSLGI IE+ E +PP
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
Y N N + ALY IA N TP LQ N +SA+
Sbjct: 216 YLNENPLRALYLIATNGTPELQ---------------------NPEKLSAI--------- 245
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVRD 513
F F++ CL + R S+ LL H + + S L LI K A ++
Sbjct: 246 ----------FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKN 295
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
++R+ K+PN + Y YL W+VMEY G S +D+ V + + E +IAA+C L+
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQ 127
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYWMAPEV 121
L +LHS IHRD+K+ NILL G+VKL DFG + P S VGTPYWMAPEV
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+ Y KVD+WSLGI
Sbjct: 188 V---TRKAYGPKVDIWSLGI 204
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G S +D+ V + + E +IAA+C L+ L +LHS IHRD+K+ NILL
Sbjct: 94 VVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITSEHSVQSVGVG 709
G+VKL D IT E S +S VG
Sbjct: 152 DGSVKL--------TDFGFCAQITPEQSKRSTMVG 178
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 162/360 (45%), Gaps = 86/360 (23%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP+K + +IG G+ G VY A + + + VAI++M+ Q K I+ EI +R+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRE 74
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K+PN + Y YL W+VMEY G S +D+
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------------------------- 108
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + + E +IAA+C L+ L +LHS IHRD+K+ NILL G+VKL
Sbjct: 109 ---------VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 159
Query: 338 DFGSASIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG + P S VGTPYWMAPEV+ Y KVD+WSLGI IE+ E +PP
Sbjct: 160 DFGFCAQITPEQSKRSXMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
Y N N + ALY IA N TP LQ N +SA+
Sbjct: 217 YLNENPLRALYLIATNGTPELQ---------------------NPEKLSAI--------- 246
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVRD 513
F F++ CL + R S+ L+ H + + S L LI K A ++
Sbjct: 247 ----------FRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKN 296
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
++R+ K+PN + Y YL W+VMEY G S +D+ V + + E +IAA+C L+
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQ 128
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYWMAPEV 121
L +LHS IHRD+K+ NILL G+VKL DFG + P S VGTPYWMAPEV
Sbjct: 129 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 188
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+ Y KVD+WSLGI
Sbjct: 189 V---TRKAYGPKVDIWSLGI 205
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G S +D+ V + + E +IAA+C L+ L +LHS IHRD+K+ NILL
Sbjct: 95 VVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 152
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITSEHSVQSVGVG 709
G+VKL D IT E S +S VG
Sbjct: 153 DGSVKL--------TDFGFCAQITPEQSKRSXMVG 179
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 162/360 (45%), Gaps = 86/360 (23%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP+K + +IG G+ G VY A + + + VAI++M+ Q K I+ EI +R+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRE 74
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K+PN + Y YL W+VMEY G S +D+
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------------------------- 108
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + + E +IAA+C L+ L +LHS IHR++K+ NILL G+VKL
Sbjct: 109 ---------VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLT 159
Query: 338 DFGSASIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG + P S VGTPYWMAPEV+ Y KVD+WSLGI IE+ E +PP
Sbjct: 160 DFGFCAQITPEQSKRSTMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
Y N N + ALY IA N TP LQ N +SA+
Sbjct: 217 YLNENPLRALYLIATNGTPELQ---------------------NPEKLSAI--------- 246
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTKAAVRD 513
F F++ CL + R S+ L+ H + + S L LI K A ++
Sbjct: 247 ----------FRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKN 296
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
++R+ K+PN + Y YL W+VMEY G S +D+ V + + E +IAA+C L+
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQ 128
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYWMAPEV 121
L +LHS IHR++K+ NILL G+VKL DFG + P S VGTPYWMAPEV
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+ Y KVD+WSLGI
Sbjct: 189 V---TRKAYGPKVDIWSLGI 205
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G S +D+ V + + E +IAA+C L+ L +LHS IHR++K+ NILL
Sbjct: 95 VVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM 152
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITSEHSVQSVGVG 709
G+VKL D IT E S +S VG
Sbjct: 153 DGSVKL--------TDFGFCAQITPEQSKRSTMVG 179
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 153/341 (44%), Gaps = 73/341 (21%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G+ V A C +E VAIK+++ ++C ++LKEI+ + Q HPN + Y
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINL--EKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 230 CYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
++ WLVM+ G S DII+ H + + H G+
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGV---------------------- 117
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA 348
L E IA I VL GL YLH G+IHRDVKAGNILL E G+V++ADFG ++
Sbjct: 118 ---LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Query: 349 ---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+FVGTP WMAPEV+ + YD K D+WS GIT IELA PY
Sbjct: 175 GDITRNKVRKTFVGTPCWMAPEVMEQVR--GYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
M L QND P L++ D L+
Sbjct: 233 MKVLMLTLQNDPPSLET-------------------------------GVQDKEMLKK-- 259
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVL 500
+ +F +S CL K+P RP++ LL H + ++ L
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFL 300
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 84/152 (55%), Gaps = 19/152 (12%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIE------VHKRP-LKEEEIAAI 59
+ Q HPN + Y ++ WLVM+ G S DII+ HK L E IA I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---------NSF 110
VL GL YLH G+IHRDVKAGNILL E G+V++ADFG ++ +F
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VGTP WMAPEV+ + YD K D+WS GIT
Sbjct: 187 VGTPCWMAPEVMEQVR--GYDFKADIWSFGIT 216
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 623 GSASDIIE------VHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
GS DII+ HK L E IA I VL GL YLH G+IHRDVKAGNILL E
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157
Query: 676 GTVKL 680
G+V++
Sbjct: 158 GSVQI 162
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 151/336 (44%), Gaps = 73/336 (21%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G+ V A C +E VAIK+++ ++C ++LKEI+ + Q HPN + Y
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINL--EKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 230 CYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
++ WLVM+ G S DII+ H + + H G+
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGV---------------------- 112
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA 348
L E IA I VL GL YLH G+IHRDVKAGNILL E G+V++ADFG ++
Sbjct: 113 ---LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 349 ---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+FVGTP WMAPEV+ + YD K D+WS GIT IELA PY
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEVMEQVR--GYDFKADIWSFGITAIELATGAAPYHKYPP 227
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
M L QND P L++ D L+
Sbjct: 228 MKVLMLTLQNDPPSLET-------------------------------GVQDKEMLKK-- 254
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPR 495
+ +F +S CL K+P RP++ LL H + +
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 84/152 (55%), Gaps = 19/152 (12%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIE------VHKRP-LKEEEIAAI 59
+ Q HPN + Y ++ WLVM+ G S DII+ HK L E IA I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---------NSF 110
VL GL YLH G+IHRDVKAGNILL E G+V++ADFG ++ +F
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VGTP WMAPEV+ + YD K D+WS GIT
Sbjct: 182 VGTPCWMAPEVMEQVR--GYDFKADIWSFGIT 211
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 623 GSASDIIE------VHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
GS DII+ HK L E IA I VL GL YLH G+IHRDVKAGNILL E
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 152
Query: 676 GTVKL 680
G+V++
Sbjct: 153 GSVQI 157
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 143 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 199
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 200 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 239
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 240 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 285 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 341
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 342 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 374
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 375 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 421
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 201 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 259
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 320 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 346
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 225 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 283
Query: 676 GTVKL 680
G VKL
Sbjct: 284 GRVKL 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 66 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 122
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 123 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 162
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 163 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 207
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 208 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 264
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 265 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 297
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 298 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 344
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 182
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 243 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 269
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 148 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 206
Query: 676 GTVKL 680
G VKL
Sbjct: 207 GRVKL 211
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 21 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 77
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 78 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 117
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 118 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 162
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 163 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 219
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 220 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 252
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 253 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 299
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 137
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 198 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 224
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 103 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 161
Query: 676 GTVKL 680
G VKL
Sbjct: 162 GRVKL 166
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 23 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 79
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 80 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 119
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 120 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 165 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 221
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 222 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 254
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 255 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 301
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 139
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 200 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 226
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 105 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 163
Query: 676 GTVKL 680
G VKL
Sbjct: 164 GRVKL 168
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 12 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 68
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 69 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 108
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 109 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 153
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 210
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 211 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 243
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 244 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 290
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 128
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 189 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 215
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 94 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 152
Query: 676 GTVKL 680
G VKL
Sbjct: 153 GRVKL 157
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 166/360 (46%), Gaps = 86/360 (23%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D DP ++ +IG GS G V A S ++VA+KKM +Q E + E+
Sbjct: 16 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEV 72
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W+VME+ G A +DI+
Sbjct: 73 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-------------------- 112
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT G
Sbjct: 113 --------------THTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 157
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S + P VGTPYWMAPE+I + Y +VD+WSLGI IE+
Sbjct: 158 RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP---YGPEVDIWSLGIMVIEMV 214
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYFN + A+ I N P L+ N++ +S
Sbjct: 215 DGEPPYFNEPPLKAMKMIRDNLPPRLK---------------------NLHKVS------ 247
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
P L+ F+ L ++PA R ++ LL H + + P+ +V L+R+ +
Sbjct: 248 ----PSLKG---------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 294
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R +H N +E YL W+VME+ G A I H R + EE+IAA+C VL+
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQA 132
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+ LH+ G IHRD+K+ +ILLT G VKL+DFG S + P VGTPYWMAPE+I
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 193 SRLP---YGPEVDIWSLGIM--------VIEMVDGEPP 219
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IAA+C VL+ L+ LH+ G IHRD+K+ +ILLT
Sbjct: 98 VVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 156
Query: 676 GTVKL 680
G VKL
Sbjct: 157 GRVKL 161
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 86/357 (24%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ D+ DP + + +IG GS G V AR S VA+K M +Q E + E+
Sbjct: 37 VVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL---LFNEV 93
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQ 272
+R +H N +E YL W++ME+ G A +DI
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI--------------------- 132
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
V + L EE+IA +C VL+ L YLH+ G IHRD+K+ +ILLT G
Sbjct: 133 --------------VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178
Query: 333 TVKLADFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKL+DFG S P VGTPYWMAPEVI Y +VD+WSLGI IE+
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI---SRSLYATEVDIWSLGIMVIEMV 235
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIA 448
+ +PPYF+ + + A+ + + P L++S
Sbjct: 236 DGEPPYFSDSPVQAMKRLRDSPPPKLKNS------------------------------- 264
Query: 449 QNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIR 505
+P L+ F+ L ++P +R ++ LL H + + P LV LI+
Sbjct: 265 HKVSPVLRD---------FLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQ 312
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 90/159 (56%), Gaps = 18/159 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLR 65
++R +H N +E YL W++ME+ G A +DI V + L EE+IA +C VL+
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI--VSQVRLNEEQIATVCEAVLQ 152
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEV 121
L YLH+ G IHRD+K+ +ILLT G VKL+DFG S P VGTPYWMAPEV
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEV 212
Query: 122 ILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
I Y +VD+WSLGI + E+ D E P
Sbjct: 213 I---SRSLYATEVDIWSLGIM--------VIEMVDGEPP 240
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME+ G A +DI V + L EE+IA +C VL+ L YLH+ G IHRD+K+ +ILLT
Sbjct: 119 VLMEFLQGGALTDI--VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL 176
Query: 675 TGTVKL 680
G VKL
Sbjct: 177 DGRVKL 182
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 156/355 (43%), Gaps = 86/355 (24%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
DP + + +IG GS G V A + + VA+KKM +Q E + E+ +R
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL---LFNEVVIMRD 98
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
H N ++ YL W+VME+ G A +DI+
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV------------------------- 133
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
H R + EE+IA +C VLR L+YLH+ G IHRD+K+ +ILLT G +KL+
Sbjct: 134 ---------THTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLS 183
Query: 338 DFG---SASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG S + P VGTPYWMAPEVI + Y +VD+WSLGI IE+ + +PP
Sbjct: 184 DFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP---YGTEVDIWSLGIMVIEMIDGEPP 240
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
YFN + A+ I + P ++ L+ +
Sbjct: 241 YFNEPPLQAMRRIRDSLPPRVKD---------------------------LHKV------ 267
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSVLVDLIRRTK 508
S F+ L + P+ R ++ LL H + PS +V L+R+ +
Sbjct: 268 -------SSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQYR 315
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++R H N ++ YL W+VME+ G A I H R + EE+IA +C VLR
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRA 153
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANS-FVGTPYWMAPEVI 122
L+YLH+ G IHRD+K+ +ILLT G +KL+DFG S + P VGTPYWMAPEVI
Sbjct: 154 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Query: 123 LAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDP 160
+ Y +VD+WSLGI + E+ D E P
Sbjct: 214 SRLP---YGTEVDIWSLGIM--------VIEMIDGEPP 240
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+VME+ G A I H R + EE+IA +C VLR L+YLH+ G IHRD+K+ +ILLT
Sbjct: 119 VVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 177
Query: 676 GTVKL 680
G +KL
Sbjct: 178 GRIKL 182
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F ++IG G F VY A CL+ VA+KK+ A+ AD +KEI L+QL HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I+Y ++ D+ +V+E L A D+ + +
Sbjct: 94 VIKYYASFIEDNELNIVLE--LADAGDLSRM---------------------------IK 124
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG--- 340
+F+ KR + E + + L ++HS +HRD+K N+ +T TG VKL D G
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
Query: 341 -SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF--NM 397
+S A+S VGTPY+M+PE I E Y+ K D+WSLG E+A + P++ M
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSPERI---HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 241
Query: 398 NAMSALYHIAQNDTPCLQSSDWS------VIKTISSTAERKPPYFNMNAMSALYHIAQND 451
N S I Q D P L S +S V I+ E++P ++ +Y +A+
Sbjct: 242 NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP------DVTYVYDVAKRM 295
Query: 452 TPCLQSS 458
C SS
Sbjct: 296 HACTASS 302
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDI------IEVHKRPLKEEEIAAIC 60
LL+QL HPN I+Y ++ D+ +V+E L A D+ + KR + E +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLE--LADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYW 116
+ L ++HS +HRD+K N+ +T TG VKL D G +S A+S VGTPY+
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
M+PE I E Y+ K D+WSLG
Sbjct: 203 MSPERI---HENGYNFKSDIWSLG 223
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 632 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDS 691
KR + E + + L ++HS +HRD+K N+ +T TG VKL G
Sbjct: 129 QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG----DLGLGR 184
Query: 692 SKSNSITSEHSVQSVGVGVNP 712
S+ T+ HS+ ++P
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSP 205
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 158/376 (42%), Gaps = 83/376 (22%)
Query: 164 FEDLREIGHG--SFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILK-EIRFLRQLK 220
+E L IG G V AR + E V +++++ + C+ + L+ E+ +
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL--EACSNEMVTFLQGELHVSKLFN 68
Query: 221 HPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
HPN + YR ++ D+ W+V + GSA D+I H+++ GM
Sbjct: 69 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD------GM------------- 109
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA-- 337
E IA I GVL+ L+Y+H +G +HR VKA +IL++ G V L+
Sbjct: 110 -------------NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGL 156
Query: 338 -----------------DFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 380
DF S+K W++PEV+ +G YD K D++S+
Sbjct: 157 RSNLSMISHGQRQRVVHDFPKYSVKVLP--------WLSPEVLQQNLQG-YDAKSDIYSV 207
Query: 381 GITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNA 440
GIT ELA P+ +M A L PCL + + ++ + R A
Sbjct: 208 GITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSV------A 261
Query: 441 MSALYHIAQNDTPCLQSSD---------WSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV 491
S L TP + D +S F HFV CL +NP RPS+ LL H
Sbjct: 262 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 321
Query: 492 --TRPRSPSVLVDLIR 505
+ R+ L +L+R
Sbjct: 322 KQIKRRASEALPELLR 337
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 30/161 (18%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVH-KRPLKEEEIAAICSGVLRG 66
+ HPN + YR ++ D+ W+V + GSA D+I H + E IA I GVL+
Sbjct: 65 KLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKA 124
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLA-------------------DFGSASIKCPA 107
L+Y+H +G +HR VKA +IL++ G V L+ DF S+K
Sbjct: 125 LDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP 184
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKD 148
W++PEV+ +G YD K D++S+GIT L +
Sbjct: 185 --------WLSPEVLQQNLQG-YDAKSDIYSVGITACELAN 216
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 623 GSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
GSA D+I H + E IA I GVL+ L+Y+H +G +HR VKA +IL++ G V L
Sbjct: 95 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL 153
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 158/376 (42%), Gaps = 83/376 (22%)
Query: 164 FEDLREIGHG--SFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILK-EIRFLRQLK 220
+E L IG G V AR + E V +++++ + C+ + L+ E+ +
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL--EACSNEMVTFLQGELHVSKLFN 84
Query: 221 HPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
HPN + YR ++ D+ W+V + GSA D+I H+++ GM
Sbjct: 85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD------GM------------- 125
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA-- 337
E IA I GVL+ L+Y+H +G +HR VKA +IL++ G V L+
Sbjct: 126 -------------NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGL 172
Query: 338 -----------------DFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 380
DF S+K W++PEV+ +G YD K D++S+
Sbjct: 173 RSNLSMISHGQRQRVVHDFPKYSVKVLP--------WLSPEVLQQNLQG-YDAKSDIYSV 223
Query: 381 GITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNA 440
GIT ELA P+ +M A L PCL + + ++ + R A
Sbjct: 224 GITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSV------A 277
Query: 441 MSALYHIAQNDTPCLQSSD---------WSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV 491
S L TP + D +S F HFV CL +NP RPS+ LL H
Sbjct: 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337
Query: 492 --TRPRSPSVLVDLIR 505
+ R+ L +L+R
Sbjct: 338 KQIKRRASEALPELLR 353
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 30/164 (18%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVH-KRPLKEEEIAAICSGVLRG 66
+ HPN + YR ++ D+ W+V + GSA D+I H + E IA I GVL+
Sbjct: 81 KLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKA 140
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLA-------------------DFGSASIKCPA 107
L+Y+H +G +HR VKA +IL++ G V L+ DF S+K
Sbjct: 141 LDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP 200
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDPEI 151
W++PEV+ +G YD K D++S+GIT L + +
Sbjct: 201 --------WLSPEVLQQNLQG-YDAKSDIYSVGITACELANGHV 235
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 623 GSASDIIEVH-KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
GSA D+I H + E IA I GVL+ L+Y+H +G +HR VKA +IL++ G V L
Sbjct: 111 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL 169
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 53/351 (15%)
Query: 150 EIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI 209
++ EL D + FE + E+G G+ G V+ S ++A +K+ +L + A + I
Sbjct: 61 KVGELKDDD-----FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQI 113
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
++E++ L + P + + G + D + ME+ G + D
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------------------- 154
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILL 328
Q LK + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 155 -QVLKKAGR-------------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 200
Query: 329 TETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G +KL DFG + I ANSFVGT +M+PE + Y + D+WS+G++ +E
Sbjct: 201 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVE 257
Query: 387 LA-ERKP-PYFNMNAMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMS 442
+A R P P + + ++ + D + + +SS + +PP M
Sbjct: 258 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP---MAIFE 314
Query: 443 ALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
L +I P L S+ +S F FV+ CL KNPA+R +L+ H + R
Sbjct: 315 LLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 365
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 178
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE +
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 238
Query: 124 AMDEGQYDGKVDVWSLGIT 142
Y + D+WS+G++
Sbjct: 239 GT---HYSVQSDIWSMGLS 254
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 202
Query: 675 TGTVKL 680
G +KL
Sbjct: 203 RGEIKL 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 48/337 (14%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 96
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 97 ----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP-PYFNMN 398
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A R P P +
Sbjct: 153 GQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 399 AMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ ++ + D + + +SS + +PP M L +I P L
Sbjct: 210 ELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP---MAIFELLDYIVNEPPPKLP 266
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
S +S F FV+ CL KNPA+R +L+ H + R
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 173
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLS 192
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 675 TGTVKL 680
G +KL
Sbjct: 141 RGEIKL 146
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 48/337 (14%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 96
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 97 ----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP-PYFNMN 398
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A R P P +
Sbjct: 153 GQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 399 AMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ ++ + D + + +SS + +PP M L +I P L
Sbjct: 210 ELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP---MAIFELLDYIVNEPPPKLP 266
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
S +S F FV+ CL KNPA+R +L+ H + R
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 173
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLS 192
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 675 TGTVKL 680
G +KL
Sbjct: 141 RGEIKL 146
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 153/343 (44%), Gaps = 48/343 (13%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 96
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 97 ----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP-PYFNMN 398
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A R P P +
Sbjct: 153 GQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 399 AMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ ++ + D + + +SS + +PP M L +I P L
Sbjct: 210 ELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP---MAIFELLDYIVNEPPPKLP 266
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSV 499
S +S F FV+ CL KNPA+R +L+ H + R + V
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 309
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 173
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLS 192
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 675 TGTVKL 680
G +KL
Sbjct: 141 RGEIKL 146
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 153/343 (44%), Gaps = 48/343 (13%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 96
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 97 ----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP-PYFNMN 398
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A R P P +
Sbjct: 153 GQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 399 AMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ ++ + D + + +SS + +PP M L +I P L
Sbjct: 210 ELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP---MAIFELLDYIVNEPPPKLP 266
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSV 499
S +S F FV+ CL KNPA+R +L+ H + R + V
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 309
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 173
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLS 192
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 675 TGTVKL 680
G +KL
Sbjct: 141 RGEIKL 146
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 145/333 (43%), Gaps = 60/333 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKK-MSYLGKQCAEKWADILKEIRFLRQLKHP 222
+E + +IG GS+G V+ R + +IVAIKK + +K A L+EIR L+QLKHP
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA--LREIRMLKQLKHP 62
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + + R LV EYC +H L
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYC---------------------------------DHTVL 89
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ ++R + E + +I L+ +N+ H IHRDVK NIL+T+ +KL DFG A
Sbjct: 90 HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
Query: 343 SIKC-PANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
+ P++ + V T ++ +PE+++ + QY VDVW++G EL P + +
Sbjct: 150 RLLTGPSDYYDDEVATRWYRSPELLVG--DTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207
Query: 399 AMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHI--AQNDTPC-L 455
+ LY I KT+ R F+ N + I ++ P L
Sbjct: 208 DVDQLYLIR---------------KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLEL 252
Query: 456 QSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
+ + S + CL +P +R + +LL H
Sbjct: 253 KFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L+QLKHPN + + R LV EYC + ++ ++R + E + +I L+
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQA 114
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANSF---VGTPYWMAPEVI 122
+N+ H IHRDVK NIL+T+ +KL DFG A + P++ + V T ++ +PE++
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 123 LAMDEGQYDGKVDVWSLGITPGSL 146
+ + QY VDVW++G L
Sbjct: 175 VG--DTQYGPPVDVWAIGCVFAEL 196
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 615 QLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV EYC + ++ ++R + E + +I L+ +N+ H IHRDVK NIL+T+
Sbjct: 78 HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK 137
Query: 675 TGTVKL 680
+KL
Sbjct: 138 HSVIKL 143
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 154/354 (43%), Gaps = 55/354 (15%)
Query: 150 EIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI 209
++ EL D + FE + E+G G+ G V + S I+A +K+ +L + A + I
Sbjct: 9 KVGELKDDD-----FERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIR-NQI 61
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
++E++ L + P + + G + D + ME+ G + D
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------------------- 102
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILL 328
Q LK E + P EE + + VLRGL YL +I HRDVK NIL+
Sbjct: 103 -QVLK-----------EAKRIP--EEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 148
Query: 329 TETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G +KL DFG + I ANSFVGT +MAPE + Y + D+WS+G++ +E
Sbjct: 149 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE---RLQGTHYSVQSDIWSMGLSLVE 205
Query: 387 LA-ERKP-PYFNMNAMSALYHIA-----QNDTPCLQSSDWSVIKTISSTAERKPPYFNMN 439
LA R P P + + A++ + + + + +S P M
Sbjct: 206 LAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRP--AMA 263
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
L +I P L + ++ F FV+ CL KNPA+R L H + R
Sbjct: 264 IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKR 317
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+L + P + + G + D + ME+ G + D + + + EE + + VLR
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLR 125
Query: 66 GLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVI 122
GL YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +MAPE
Sbjct: 126 GLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE-- 183
Query: 123 LAMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 184 -RLQGTHYSVQSDIWSMGLS 202
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + + EE + + VLRGL YL +I HRDVK NIL+
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS 150
Query: 675 TGTVKL 680
G +KL
Sbjct: 151 RGEIKL 156
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 141/333 (42%), Gaps = 72/333 (21%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLKKAGR----- 100
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 101 --------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A + P
Sbjct: 153 GQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYP------- 202
Query: 401 SALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSDW 460
I + + +PP M L +I P L S +
Sbjct: 203 ---------------------IPPPDAKEDSRPP---MAIFELLDYIVNEPPPKLPSGVF 238
Query: 461 SDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
S F FV+ CL KNPA+R +L+ H + R
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 173
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLS 192
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 675 TGTVKL 680
G +KL
Sbjct: 141 RGEIKL 146
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 48/343 (13%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 92
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 123
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ + P E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 124 --KAGRIP--EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP-PYFNMN 398
I ANSFVGT +M+PE + Y + D+WS+G++ +E+A R P P +
Sbjct: 180 GQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
Query: 399 AMSALYHI-AQNDTPCLQSSDWSVIKTISSTA-ERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ ++ + D + + ++ + +PP M L +I P L
Sbjct: 237 ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP---MAIFELLDYIVNEPPPKLP 293
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSV 499
S +S F FV+ CL KNPA+R +L+ H + R + V
Sbjct: 294 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 336
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+L + P + + G + D + ME+ G + D + + E+ + + V++
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 142
Query: 66 GLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVI 122
GL YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE +
Sbjct: 143 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 202
Query: 123 LAMDEGQYDGKVDVWSLGIT 142
Y + D+WS+G++
Sbjct: 203 QGT---HYSVQSDIWSMGLS 219
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 167
Query: 675 TGTVKL 680
G +KL
Sbjct: 168 RGEIKL 173
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 52/296 (17%)
Query: 144 GSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCA 203
G L PE E F K + +IG G++G VY AR ++ E+VA+KK+ L +
Sbjct: 1 GPLGSPEFMENFQK---------VEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETE 50
Query: 204 EKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHV 263
+ ++EI L++L HPN ++ ++ +LV E+ +H
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF----------LH-------- 92
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
Q LK F + AL + PL I + +L+GL + HS +HRD+K
Sbjct: 93 -------QDLKKFMDASALTGIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 324 GNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWS 379
N+L+ G +KLADFG A + P ++ V T ++ APE++L Y VD+WS
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK--YYSTAVDIWS 196
Query: 380 LGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
LG E+ R+ + + + L+ I + L + D V ++S + KP +
Sbjct: 197 LGCIFAEMVTRRALFPGDSEIDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 248
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 118
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 179 PEILLGXK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 221
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 151
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 46/247 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G++G VY R L ++ +AIK++ + ++ + +EI + LKH N ++Y G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP---LHEEIALHKHLKHKNIVQYLG 86
Query: 230 CYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
+ + + ME G S S ++ W
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKW-------------------------------- 114
Query: 289 KRPLKEEE--IAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGS---- 341
PLK+ E I +L GL YLH +HRD+K N+L+ T +G +K++DFG+
Sbjct: 115 -GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173
Query: 342 ASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA-M 400
A I +F GT +MAPE+I G Y D+WSLG T IE+A KPP++ +
Sbjct: 174 AGINPCTETFTGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQ 232
Query: 401 SALYHIA 407
+A++ +
Sbjct: 233 AAMFKVG 239
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEE--IAAICSG 62
+L + LKH N ++Y G + + + ME G S S ++ PLK+ E I
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGS----ASIKCPANSFVGTPYWM 117
+L GL YLH +HRD+K N+L+ T +G +K++DFG+ A I +F GT +M
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 190
Query: 118 APEVILAMDEGQYDGKVDVWSLGIT 142
APE+I G Y D+WSLG T
Sbjct: 191 APEIIDKGPRG-YGKAADIWSLGCT 214
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 623 GSASDIIEVHKRPLKEEE--IAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 679
GS S ++ PLK+ E I +L GL YLH +HRD+K N+L+ T +G +K
Sbjct: 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK 163
Query: 680 L 680
+
Sbjct: 164 I 164
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 52/296 (17%)
Query: 144 GSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCA 203
G L PE E F K + +IG G++G VY AR ++ E+VA+KK+ L +
Sbjct: 1 GPLGSPEFMENFQK---------VEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETE 50
Query: 204 EKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHV 263
+ ++EI L++L HPN ++ ++ +LV E+ +H
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF----------LH-------- 92
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
Q LK F + AL + PL I + +L+GL + HS +HRD+K
Sbjct: 93 -------QDLKKFMDASALTGIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 324 GNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWS 379
N+L+ G +KLADFG A + P ++ V T ++ APE++L Y VD+WS
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWS 196
Query: 380 LGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
LG E+ R+ + + + L+ I + L + D V ++S + KP +
Sbjct: 197 LGCIFAEMVTRRALFPGDSEIDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 248
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 118
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 179 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 221
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 151
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ VH Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEH----------VH---------------QDLKTFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L + D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 67 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKTFMDASALT 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 102 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L + D + PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E HV+ Q LK F + AL
Sbjct: 67 IVKLLDVIHTENKLYLVFE-------------------HVD------QDLKKFMDASALT 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 102 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL++ HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL++ HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL++ HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 60/335 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKK-MSYLGKQCAEKWADILKEIRFLRQLKHP 222
+E+L +G GS+G V R + IVAIKK + + +K A ++EI+ L+QL+H
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--MREIKLLKQLRHE 84
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + + +LV E F +H L
Sbjct: 85 NLVNLLEVCKKKKRWYLVFE---------------------------------FVDHTIL 111
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ E+ L + + ++ G+ + HS IHRD+K NIL++++G VKL DFG A
Sbjct: 112 DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
Query: 343 -SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
++ P + V T ++ APE+++ + +Y VDVW++G E+ +P + +
Sbjct: 172 RTLAAPGEVYDDEVATRWYRAPELLVG--DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229
Query: 399 AMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSA---LYHIAQNDTPCL 455
+ LYHI CL + R FN N + A L I + +
Sbjct: 230 DIDQLYHIMM----CL-----------GNLIPRHQELFNKNPVFAGVRLPEIKEREPLER 274
Query: 456 QSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDL 490
+ S+ CL +P RP LL HD
Sbjct: 275 RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL+QL+H N + + +LV E+ + D +E+ L + + ++
Sbjct: 76 KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ + HS IHRD+K NIL++++G VKL DFG A ++ P + V T ++ APE+
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 122 ILAMDEGQYDGKVDVWSLG 140
++ + +Y VDVW++G
Sbjct: 196 LVG--DVKYGKAVDVWAIG 212
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ + D +E+ L + + ++ G+ + HS IHRD+K NIL++++
Sbjct: 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS 160
Query: 676 GTVKL 680
G VKL
Sbjct: 161 GVVKL 165
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGXK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGXK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 83/353 (23%)
Query: 150 EIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI 209
++ EL D + FE + E+G G+ G V+ S ++A +K+ +L + A + I
Sbjct: 18 KVGELKDDD-----FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQI 70
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
++E++ L + P + + G + D + ME+ G + D
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------------------- 111
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILL 328
Q LK + + P E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 112 -QVLK-----------KAGRIP--EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 157
Query: 329 TETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G +KL DFG + I ANSFVGT +M+PE + Y + D+WS+G++ +E
Sbjct: 158 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVE 214
Query: 387 LAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYH 446
+A + P + + A++ + L +
Sbjct: 215 MAVGRYPIGSGSGSMAIFEL-------------------------------------LDY 237
Query: 447 IAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRSPSV 499
I P L S +S F FV+ CL KNPA+R +L+ H + R + V
Sbjct: 238 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 290
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I ANSFVGT +M+PE
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 192
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 193 RLQGTHYSVQSDIWSMGLS 211
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 159
Query: 675 TGTVKL 680
G +KL
Sbjct: 160 RGEIKL 165
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 45/241 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G++G VY R L ++ +AIK++ + ++ + +EI + LKH N ++Y G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP---LHEEIALHKHLKHKNIVQYLG 72
Query: 230 CYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
+ + + ME G S S ++ W
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKW-------------------------------- 100
Query: 289 KRPLKEEE--IAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGS---- 341
PLK+ E I +L GL YLH +HRD+K N+L+ T +G +K++DFG+
Sbjct: 101 -GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 159
Query: 342 ASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
A I +F GT +MAPE+I G Y D+WSLG T IE+A KPP++ +
Sbjct: 160 AGINPCTETFTGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQ 218
Query: 402 A 402
A
Sbjct: 219 A 219
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEE--IAAICSG 62
+L + LKH N ++Y G + + + ME G S S ++ PLK+ E I
Sbjct: 57 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGS----ASIKCPANSFVGTPYWM 117
+L GL YLH +HRD+K N+L+ T +G +K++DFG+ A I +F GT +M
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 176
Query: 118 APEVILAMDEGQYDGKVDVWSLGIT 142
APE+I G Y D+WSLG T
Sbjct: 177 APEIIDKGPRG-YGKAADIWSLGCT 200
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 623 GSASDIIEVHKRPLKEEE--IAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 679
GS S ++ PLK+ E I +L GL YLH +HRD+K N+L+ T +G +K
Sbjct: 90 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK 149
Query: 680 L 680
+
Sbjct: 150 I 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 67
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 68 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 102
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 103 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 156 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 214 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 245
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 115
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 176 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 218
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 148
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 66 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 100
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 101 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 212 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 243
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 174 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 216
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 96 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 132
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 133 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 179
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 180 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 234
Query: 398 NAMSALY 404
N Y
Sbjct: 235 NTYQETY 241
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 13/137 (9%)
Query: 11 LKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L+
Sbjct: 91 LRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 148
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 204
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 205 -EGRMHDEKVDLWSLGV 220
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 111 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 169
Query: 675 TGTVKL 680
G +K+
Sbjct: 170 AGELKI 175
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 67 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 102 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 65 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 100 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 211 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 242
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 173 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 215
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 67
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 68 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 102
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 103 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 156 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 214 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 245
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 115
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 176 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 218
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 148
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 66 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 100
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 101 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 212 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 243
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 174 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 216
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 146
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 65 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 100 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 211 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 242
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 173 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 215
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 145
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 65 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 100 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 211 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 173 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 215
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 67 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 102 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 66 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 100
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 101 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 212 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 243
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 174 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 216
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 65 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 100 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 153 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 211 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 173 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 215
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 96 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 132
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 133 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 179
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P+ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 180 WSVHAPSSRRDDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 234
Query: 398 NAMSALY 404
N Y
Sbjct: 235 NTYQETY 241
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 11 LKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L+
Sbjct: 91 LRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 148
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P+ + GT ++ PE+I
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRDDLCGTLDYLPPEMI--- 204
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 205 -EGRMHDEKVDLWSLGV 220
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 111 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 169
Query: 675 TGTVKL 680
G +K+
Sbjct: 170 AGELKI 175
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 87 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 123
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 124 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 170
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 171 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 225
Query: 398 NAMSALY 404
N Y
Sbjct: 226 NTYQETY 232
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 13/137 (9%)
Query: 11 LKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L+
Sbjct: 82 LRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 139
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 195
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 196 -EGRMHDEKVDLWSLGV 211
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 102 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 160
Query: 675 TGTVKL 680
G +K+
Sbjct: 161 AGELKI 166
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKDFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ D ++ PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPL--IKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 144
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 71 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 107
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 108 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 154
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P+ ++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 155 WSVHAPSSRRDTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 209
Query: 398 NAMSALY 404
N Y
Sbjct: 210 NTYQETY 216
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 65 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P+ ++ GT ++ PE+I
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRDTLCGTLDYLPPEMI-- 179
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 180 --EGRMHDEKVDLWSLGV 195
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 675 TGTVKL 680
G +K+
Sbjct: 145 AGELKI 150
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 157/344 (45%), Gaps = 55/344 (15%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L++IG GSFG + IK+++ + + +++ + +E+ L +KHPN ++
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEIN-ISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
YR + + + ++VM+YC G G+ +++ + LF
Sbjct: 88 YRESFEENGSLYIVMDYCEG--------------------GDLFKRIN--AQKGVLF--- 122
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC 346
+E++I + L ++H +HRD+K+ NI LT+ GTV+L DFG A +
Sbjct: 123 ------QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
Query: 347 P----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS- 401
A + +GTPY+++PE+ + Y+ K D+W+LG EL K F +M
Sbjct: 177 STVELARACIGTPYYLSPEIC---ENKPYNNKSDIWALGCVLYELCTLKHA-FEAGSMKN 232
Query: 402 -ALYHIAQNDTPCLQSSDWSVIKTISSTAERKP---PYFN--MNAMSALYHIAQNDTPCL 455
L I+ + P + + +S +R P P N + I + +P L
Sbjct: 233 LVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQL 292
Query: 456 QSSDWS-DTFAHFVSSCLAKNPADRPSSGR----LLTHDLVTRP 494
+ ++ TF+ F S + PA RP+SG+ ++ +T+P
Sbjct: 293 IAEEFCLKTFSKFGSQPI---PAKRPASGQNSISVMPAQKITKP 333
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS-ASDIIEVHKRPL-KEEEIAAICSGV 63
++L +KHPN ++YR + + + ++VM+YC G I K L +E++I +
Sbjct: 75 AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP----ANSFVGTPYWMAP 119
L ++H +HRD+K+ NI LT+ GTV+L DFG A + A + +GTPY+++P
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E+ + Y+ K D+W+LG
Sbjct: 195 EIC---ENKPYNNKSDIWALG 212
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 616 LVMEYCLGS-ASDIIEVHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VM+YC G I K L +E++I + L ++H +HRD+K+ NI LT
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT 159
Query: 674 ETGTVKL 680
+ GTV+L
Sbjct: 160 KDGTVQL 166
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 112/243 (46%), Gaps = 46/243 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E L IG GS+G R +I+ K++ Y AEK ++ E+ LR+LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 224 TIEY--RGCYLRDHTAWLVMEYCLGS--ASDII----EVHWIEREFHVEGMGNRLQQLKC 275
+ Y R + T ++VMEYC G AS I E +++ EF + M LK
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK- 125
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E H+R + H++ +HRD+K N+ L VK
Sbjct: 126 ----------ECHRRS-----------------DGGHTV--LHRDLKPANVFLDGKQNVK 156
Query: 336 LADFGSASI----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
L DFG A I A +FVGTPY+M+PE M+ Y+ K D+WSLG EL
Sbjct: 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPE---QMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 392 PPY 394
PP+
Sbjct: 214 PPF 216
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query: 6 SLLRQLKHPNTIEY--RGCYLRDHTAWLVMEYCLGS--ASDIIE--VHKRPLKEEEIAAI 59
+LLR+LKHPN + Y R + T ++VMEYC G AS I + ++ L EE + +
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 60 CSGVLRGLNYLHSLGR-----IHRDVKAGNILLTETGTVKLADFGSASI----KCPANSF 110
+ + L H +HRD+K N+ L VKL DFG A I A +F
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
VGTPY+M+PE M+ Y+ K D+WSLG
Sbjct: 177 VGTPYYMSPE---QMNRMSYNEKSDIWSLG 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 109
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 156
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 157 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 211
Query: 398 NAMSALY 404
N Y
Sbjct: 212 NTYQETY 218
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 67 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 181
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 --EGRMHDEKVDLWSLGV 197
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 44/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGT---------VYRE---------LQKLSKFD----- 106
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 -----------EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG-W 154
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP+
Sbjct: 155 SVHAPSSRRAALCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLDYLPPEMI--- 178
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 -EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 75 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 111
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 112 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 158
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 159 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 213
Query: 398 NAMSALY 404
N Y
Sbjct: 214 NTYQETY 220
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 69 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 183
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 184 --EGRMHDEKVDLWSLGV 199
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 675 TGTVKL 680
G +K+
Sbjct: 149 AGELKI 154
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 112/243 (46%), Gaps = 46/243 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E L IG GS+G R +I+ K++ Y AEK ++ E+ LR+LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 224 TIEY--RGCYLRDHTAWLVMEYCLGS--ASDII----EVHWIEREFHVEGMGNRLQQLKC 275
+ Y R + T ++VMEYC G AS I E +++ EF + M LK
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK- 125
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E H+R + H++ +HRD+K N+ L VK
Sbjct: 126 ----------ECHRRS-----------------DGGHTV--LHRDLKPANVFLDGKQNVK 156
Query: 336 LADFGSASI----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
L DFG A I A +FVGTPY+M+PE M+ Y+ K D+WSLG EL
Sbjct: 157 LGDFGLARILNHDTSFAKAFVGTPYYMSPE---QMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 392 PPY 394
PP+
Sbjct: 214 PPF 216
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query: 6 SLLRQLKHPNTIEY--RGCYLRDHTAWLVMEYCLGS--ASDIIE--VHKRPLKEEEIAAI 59
+LLR+LKHPN + Y R + T ++VMEYC G AS I + ++ L EE + +
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 60 CSGVLRGLNYLHSLGR-----IHRDVKAGNILLTETGTVKLADFGSASI----KCPANSF 110
+ + L H +HRD+K N+ L VKL DFG A I A +F
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF 176
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
VGTPY+M+PE M+ Y+ K D+WSLG
Sbjct: 177 VGTPYYMSPE---QMNRMSYNEKSDIWSLG 203
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 135/334 (40%), Gaps = 76/334 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
E + E+G G++G V R + S +I+A+K++ +K + +I +R + P
Sbjct: 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-MRTVDCPF 111
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
T+ + G R+ W+ ME + ++ D I++
Sbjct: 112 TVTFYGALFREGDVWICME-LMDTSLDKFYKQVIDK------------------------ 146
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ + E+ + I +++ L +LHS L IHRDVK N+L+ G VK+ DFG +
Sbjct: 147 -----GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
Query: 343 S--IKCPANSF-VGTPYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
+ A + G +MAPE I +++ Y K D+WSLGIT IELA + PY
Sbjct: 202 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---- 257
Query: 399 AMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSS 458
W L + + +P L +
Sbjct: 258 ------------------DSWG------------------TPFQQLKQVVEEPSPQLPAD 281
Query: 459 DWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
+S F F S CL KN +RP+ L+ H T
Sbjct: 282 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHK-RPLKEEEIAAICSGVL 64
+R + P T+ + G R+ W+ ME S + + K + + E+ + I ++
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 65 RGLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSF-VGTPYWMAPE 120
+ L +LHS L IHRDVK N+L+ G VK+ DFG + + A + G +MAPE
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
Query: 121 VI-LAMDEGQYDGKVDVWSLGIT 142
I +++ Y K D+WSLGIT
Sbjct: 224 RINPELNQKGYSVKSDIWSLGIT 246
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVKL 680
+ E+ + I +++ L +LHS L IHRDVK N+L+ G VK+
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 195
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKF------ 109
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ----------DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 158
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 159 SVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 213
Query: 399 AMSALY 404
Y
Sbjct: 214 TYQETY 219
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 126
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 182
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 183 -EGRMHDEKVDLWSLGV 198
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 89 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 147
Query: 675 TGTVKL 680
G +K+
Sbjct: 148 AGELKI 153
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 109
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 156
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 157 WSVHAPSSRRAALCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 211
Query: 398 NAMSALY 404
N Y
Sbjct: 212 NTYQETY 218
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 67 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLDYLPPEMI-- 181
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 --EGRMHDEKVDLWSLGV 197
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD----- 109
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 -----------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 157
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 158 SVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 212
Query: 399 AMSALY 404
Y
Sbjct: 213 TYQETY 218
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 181
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 -EGRMHDEKVDLWSLGV 197
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD----- 105
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 106 -----------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 153
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 154 SVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 208
Query: 399 AMSALY 404
Y
Sbjct: 209 TYQETY 214
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 121
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 177
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 178 -EGRMHDEKVDLWSLGV 193
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 84 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 142
Query: 675 TGTVKL 680
G +K+
Sbjct: 143 AGELKI 148
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 75 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 111
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 112 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 158
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 159 WSVHAPSSRRTTLCGTLDYLPPEXI----EGRXHDEKVDLWSLGVLCYEFLVGKPP-FEA 213
Query: 398 NAMSALY 404
N Y
Sbjct: 214 NTYQETY 220
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 69 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEXI-- 183
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 184 --EGRXHDEKVDLWSLGV 199
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 675 TGTVKL 680
G +K+
Sbjct: 149 AGELKI 154
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 138/333 (41%), Gaps = 82/333 (24%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE + E+G G+ G V+ S ++A +K+ +L + A + I++E++ L + P
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVLHECNSPY 68
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + G + D + ME+ G + D Q LK
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLD--------------------QVLK--------- 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSA 342
+ E+ + + V++GL YL +I HRDVK NIL+ G +KL DFG +
Sbjct: 100 ----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Query: 343 S--IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
I AN FVGT +M+PE + Y + D+WS+G++ +E+A + P
Sbjct: 156 GQLIDEMANEFVGTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYP------- 205
Query: 401 SALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSDW 460
+PP M L +I P L S+ +
Sbjct: 206 -------------------------------RPP---MAIFELLDYIVNEPPPKLPSAVF 231
Query: 461 SDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
S F FV+ CL KNPA+R +L+ H + R
Sbjct: 232 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 264
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + P + + G + D + ME+ G + D + + E+ + + V++G
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 67 LNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPYWMAPEVIL 123
L YL +I HRDVK NIL+ G +KL DFG + I AN FVGT +M+PE
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPE--- 176
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ Y + D+WS+G++
Sbjct: 177 RLQGTHYSVQSDIWSMGLS 195
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTE 674
+ ME+ G + D + + E+ + + V++GL YL +I HRDVK NIL+
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 143
Query: 675 TGTVKL 680
G +KL
Sbjct: 144 RGEIKL 149
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD----- 109
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 -----------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 157
Query: 343 SIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P+ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 158 SVHAPSSRRDDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 212
Query: 399 AMSALY 404
Y
Sbjct: 213 TYQETY 218
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P+ + GT ++ PE+I
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRDDLCGTLDYLPPEMI--- 181
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 -EGRMHDEKVDLWSLGV 197
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRAALCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 71 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 107
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 108 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 154
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 155 WSVHAPSSRRTDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 209
Query: 398 NAMSALY 404
N Y
Sbjct: 210 NTYQETY 216
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 65 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLDYLPPEMI-- 179
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 180 --EGRMHDEKVDLWSLGV 195
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 675 TGTVKL 680
G +K+
Sbjct: 145 AGELKI 150
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 75 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 111
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 112 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 158
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 159 WSVHAPSSRRTDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 213
Query: 398 NAMSALY 404
N Y
Sbjct: 214 NTYQETY 220
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 69 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLDYLPPEMI-- 183
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 184 --EGRMHDEKVDLWSLGV 199
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 675 TGTVKL 680
G +K+
Sbjct: 149 AGELKI 154
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRTELCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTELCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 72 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 108
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 109 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 155
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 156 WSVHAPSSRRXXLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 210
Query: 398 NAMSALY 404
N Y
Sbjct: 211 NTYQETY 217
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 66 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 123
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRXXLCGTLDYLPPEMI-- 180
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 181 --EGRMHDEKVDLWSLGV 196
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 87 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 145
Query: 675 TGTVKL 680
G +K+
Sbjct: 146 AGELKI 151
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRTDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRTDLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+ K+ L + + ++EI L++L HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPN 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 98
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 99 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 210 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 172 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 214
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+ K+ L + + ++EI L++L HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ +H Q LK F + AL
Sbjct: 63 IVKLLDVIHTENKLYLVFEF----------LH---------------QDLKKFMDASALT 97
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 98 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 209 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 240
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 171 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 213
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 112/243 (46%), Gaps = 46/243 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E L IG GS+G R +I+ K++ Y AEK ++ E+ LR+LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 224 TIEY--RGCYLRDHTAWLVMEYCLGS--ASDII----EVHWIEREFHVEGMGNRLQQLKC 275
+ Y R + T ++VMEYC G AS I E +++ EF + M LK
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK- 125
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E H+R + H++ +HRD+K N+ L VK
Sbjct: 126 ----------ECHRRS-----------------DGGHTV--LHRDLKPANVFLDGKQNVK 156
Query: 336 LADFGSASI----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
L DFG A I + A FVGTPY+M+PE M+ Y+ K D+WSLG EL
Sbjct: 157 LGDFGLARILNHDEDFAKEFVGTPYYMSPE---QMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 392 PPY 394
PP+
Sbjct: 214 PPF 216
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query: 6 SLLRQLKHPNTIEY--RGCYLRDHTAWLVMEYCLGS--ASDIIE--VHKRPLKEEEIAAI 59
+LLR+LKHPN + Y R + T ++VMEYC G AS I + ++ L EE + +
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 60 CSGVLRGLNYLHSLGR-----IHRDVKAGNILLTETGTVKLADFGSASI----KCPANSF 110
+ + L H +HRD+K N+ L VKL DFG A I + A F
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF 176
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
VGTPY+M+PE M+ Y+ K D+WSLG
Sbjct: 177 VGTPYYMSPE---QMNRMSYNEKSDIWSLG 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 153
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 154 WSVHAPSSRRTXLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 208
Query: 398 NAMSALY 404
N Y
Sbjct: 209 NTYQETY 215
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 64 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTXLCGTLDYLPPEMI-- 178
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 --EGRMHDEKVDLWSLGV 194
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 109
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 156
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 157 WSVHAPSSRRXXLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 211
Query: 398 NAMSALY 404
N Y
Sbjct: 212 NTYQETY 218
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 67 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRXXLCGTLDYLPPEMI-- 181
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 --EGRMHDEKVDLWSLGV 197
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ D ++ + G L +K + LF
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALT--------GIPLPLIKSY-----LF 113
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 114 Q-------------------LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ D ++ PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD----- 106
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 107 -----------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 154
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 155 SVHAPSSRRXXLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 209
Query: 399 AMSALY 404
Y
Sbjct: 210 TYQETY 215
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ + E+ A + + L+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE+I
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRXXLCGTLDYLPPEMI--- 178
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 179 -EGRMHDEKVDLWSLGV 194
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 675 TGTVKL 680
G +K+
Sbjct: 144 AGELKI 149
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 71 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 107
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 108 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 154
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 155 WSCHAPSSRRTTLSGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 209
Query: 398 NAMSALY 404
N Y
Sbjct: 210 NTYQETY 216
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 65 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S P++ + GT ++ PE+I
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSCHAPSSRRTTLSGTLDYLPPEMI-- 179
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 180 --EGRMHDEKVDLWSLGV 195
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 675 TGTVKL 680
G +K+
Sbjct: 145 AGELKI 150
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ D ++ + G L +K + LF
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALT--------GIPLPLIKSY-----LF 112
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 113 Q-------------------LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 212 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 243
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ D ++ PL I +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL--PLIKSYLFQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 174 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 216
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 72 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 108
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+A+FG
Sbjct: 109 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG- 155
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 156 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 210
Query: 398 NAMSALY 404
N Y
Sbjct: 211 NTYQETY 217
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 66 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 123
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+A+FG S+ P++ + GT ++ PE+I
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 180
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 181 --EGRMHDEKVDLWSLGV 196
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 87 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 145
Query: 675 TGTVKL 680
G +K+
Sbjct: 146 AGELKI 151
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ LK F + AL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLS-------------------------MDLKKFMDASALT 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 102 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 213 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 244
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 175 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 217
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 147
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 73 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKFD---- 109
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+A+FG
Sbjct: 110 ------------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG- 156
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 157 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 211
Query: 398 NAMSALY 404
N Y
Sbjct: 212 NTYQETY 218
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 67 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+A+FG S+ P++ + GT ++ PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 181
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 182 --EGRMHDEKVDLWSLGV 197
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 AGELKI 152
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 133/334 (39%), Gaps = 76/334 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
E + E+G G++G V R + S +I+A+K++ +K + +I +R + P
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-MRTVDCPF 67
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
T+ + G R+ W+ ME + ++ D I++
Sbjct: 68 TVTFYGALFREGDVWICME-LMDTSLDKFYKQVIDK------------------------ 102
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ + E+ + I +++ L +LHS L IHRDVK N+L+ G VK+ DFG +
Sbjct: 103 -----GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
Query: 343 SI---KCPANSFVGTPYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
+ G +MAPE I +++ Y K D+WSLGIT IELA + PY
Sbjct: 158 GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---- 213
Query: 399 AMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSS 458
W L + + +P L +
Sbjct: 214 ------------------DSWG------------------TPFQQLKQVVEEPSPQLPAD 237
Query: 459 DWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
+S F F S CL KN +RP+ L+ H T
Sbjct: 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHK-RPLKEEEIAAICSGVL 64
+R + P T+ + G R+ W+ ME S + + K + + E+ + I ++
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 65 RGLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ L +LHS L IHRDVK N+L+ G VK+ DFG + + G +MAPE
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE 179
Query: 121 VI-LAMDEGQYDGKVDVWSLGIT 142
I +++ Y K D+WSLGIT
Sbjct: 180 RINPELNQKGYSVKSDIWSLGIT 202
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVKL 680
+ E+ + I +++ L +LHS L IHRDVK N+L+ G VK+
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 151
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ + +IG G++G VY AR ++ E+VA+KK+ L + + ++EI L++L HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ ++ +LV E+ LK F + AL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLS-------------------------MDLKKFMDASALT 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ PL I + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 100 GIPL---PL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P ++ V T ++ APE++L Y VD+WSLG E+ R+ + +
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ L+ I + L + D V ++S + KP +
Sbjct: 211 IDQLFRIFRT----LGTPDEVVWPGVTSMPDYKPSF 242
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRPLKEEEIAAICSG 62
SLL++L HPN ++ ++ +LV E+ L D + PL I +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMA 118
+L+GL + HS +HRD+K N+L+ G +KLADFG A + P ++ V T ++ A
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 119 PEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
PE++L Y VD+WSLG + PG D EI +LF
Sbjct: 173 PEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLF 215
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + +L+GL + HS +HRD+K N+L+ G +KL
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 145
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 224 TIEYRGCYLRDHT-AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G Y D T +L++EY EV+ LQ+L F E
Sbjct: 75 ILRLYG-YFHDATRVYLILEYAPRG-----EVY------------KELQKLSKFDE---- 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 113 ------------QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 159
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 160 SVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 214
Query: 399 AMSALY 404
Y
Sbjct: 215 TYQETY 220
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 21/142 (14%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYCLGSASDIIEVHKRPLK-----EEEIAAICSGV 63
L+HPN + G Y D T +L++EY EV+K K E+ A + +
Sbjct: 69 HLRHPNILRLYG-YFHDATRVYLILEYAPRG-----EVYKELQKLSKFDEQRTATYITEL 122
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPE 120
L+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPE 181
Query: 121 VILAMDEGQ-YDGKVDVWSLGI 141
+I EG+ +D KVD+WSLG+
Sbjct: 182 MI----EGRMHDEKVDLWSLGV 199
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E+ A + + L+Y HS IHRD+K N+LL G +K+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 154
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 151/357 (42%), Gaps = 83/357 (23%)
Query: 144 GSLK-DPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQC 202
G LK PE F ED +DL EIG G++G+V S +I+A+K++ +
Sbjct: 7 GKLKISPEQHWDFTAED----LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 203 AEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFH 262
+K + ++ +R P +++ G R+ W+ ME L S S
Sbjct: 63 EQKQLLMDLDV-VMRSSDCPYIVQFYGALFREGDCWICME--LMSTS------------- 106
Query: 263 VEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYL-HSLGRIHRDV 321
+ F + + V + EE + I ++ LN+L +L IHRD+
Sbjct: 107 --------------FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDI 152
Query: 322 KAGNILLTETGTVKLADFGSA-----SIKCPANSFVGTPYWMAPEVILAMDEGQ-YDGKV 375
K NILL +G +KL DFG + SI ++ G +MAPE I Q YD +
Sbjct: 153 KPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQGYDVRS 210
Query: 376 DVWSLGITCIELAERKPPYFNMNAM-SALYHIAQNDTPCLQSSDWSVIKTISSTAERKPP 434
DVWSLGIT ELA + PY N++ L + + D P L +S+ ER
Sbjct: 211 DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE-----------ER--- 256
Query: 435 YFNMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV 491
++S +F +FV+ CL K+ + RP LL H +
Sbjct: 257 ------------------------EFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASD----IIEVHKRPLKEEEIAAICSG 62
++R P +++ G R+ W+ ME S + V + EE + I
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 63 VLRGLNYL-HSLGRIHRDVKAGNILLTETGTVKLADFGSA-----SIKCPANSFVGTPYW 116
++ LN+L +L IHRD+K NILL +G +KL DFG + SI ++ G +
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPY 191
Query: 117 MAPEVILAMDEGQ-YDGKVDVWSLGIT-----PGSLKDPEIAELFDK 157
MAPE I Q YD + DVWSLGIT G P+ +FD+
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYL-HSLGRIHRDVKAGNILLTETGTVKL 680
+ EE + I ++ LN+L +L IHRD+K NILL +G +KL
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 116/247 (46%), Gaps = 47/247 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR + I+A+K + + A + +E+ L+HPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 224 TIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ G Y D T +L++EY LG+ + RE LQ+L F
Sbjct: 67 ILRLYG-YFHDATRVYLILEYAPLGT---------VYRE---------LQKLSKF----- 102
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 103 -----------DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG- 150
Query: 342 ASIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNM 397
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F
Sbjct: 151 WSVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA 205
Query: 398 NAMSALY 404
N Y
Sbjct: 206 NTYQETY 212
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+HPN + G Y D T +L++EY LG+ ++ + E+ A + + L
Sbjct: 61 HLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILA 124
+Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI-- 175
Query: 125 MDEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 176 --EGRMHDEKVDLWSLGV 191
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ + E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 82 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 140
Query: 675 TGTVKL 680
G +K+
Sbjct: 141 AGELKI 146
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 113/246 (45%), Gaps = 45/246 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 224 TIEYRGCYLRDHT-AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G Y D T +L++EY EV+ LQ+L F E
Sbjct: 75 ILRLYG-YFHDATRVYLILEYAPRG-----EVY------------KELQKLSKFDE---- 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 113 ------------QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-W 159
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPYFNMN 398
S+ P++ GT ++ PE+I EG+ +D KVD+WSLG+ C E KPP F N
Sbjct: 160 SVHAPSSRRXXLXGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGKPP-FEAN 214
Query: 399 AMSALY 404
Y
Sbjct: 215 TYQETY 220
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 21/142 (14%)
Query: 10 QLKHPNTIEYRGCYLRDHT-AWLVMEYCLGSASDIIEVHKRPLK-----EEEIAAICSGV 63
L+HPN + G Y D T +L++EY EV+K K E+ A + +
Sbjct: 69 HLRHPNILRLYG-YFHDATRVYLILEYAPRG-----EVYKELQKLSKFDEQRTATYITEL 122
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPE 120
L+Y HS IHRD+K N+LL G +K+ADFG S+ P++ GT ++ PE
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRXXLXGTLDYLPPE 181
Query: 121 VILAMDEGQ-YDGKVDVWSLGI 141
+I EG+ +D KVD+WSLG+
Sbjct: 182 MI----EGRMHDEKVDLWSLGV 199
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E+ A + + L+Y HS IHRD+K N+LL G +K+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 154
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 44/238 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSR-EIVAIKKMSYLGKQ-CAEK--WADILKEIRFLRQL 219
FE LR IG GSFG V C+V + + + M Y+ KQ C E+ ++ KE++ ++ L
Sbjct: 17 FEILRAIGKGSFGKV----CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+HP + + + ++V++ LG + +H LQQ
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGG----------DLRYH-------LQQ------- 108
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
VH KEE + ++ L+YL + IHRD+K NILL E G V + DF
Sbjct: 109 ------NVH---FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDF 159
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
A++ + + GT +MAPE+ + Y VD WSLG+T EL + PY
Sbjct: 160 NIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L+HP + + + ++V++ LG KEE + ++
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVM 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGTPYWMAPEVI 122
L+YL + IHRD+K NILL E G V + DF A++ + + GT +MAPE+
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
Query: 123 LAMDEGQYDGKVDVWSLGITPGSL 146
+ Y VD WSLG+T L
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYEL 210
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
KEE + ++ L+YL + IHRD+K NILL E G V +
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHI 156
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 43/235 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GSFG VY + VA+K + + E++ E+ LR+ +H N + + G
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ A +V ++C GS+ + + HV+ F +F
Sbjct: 100 YMTKDNLA-IVTQWCEGSS--------LYKHLHVQ------------ETKFQMF------ 132
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--- 346
++ I +G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K
Sbjct: 133 ------QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186
Query: 347 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
G+ WMAPEVI D + + DV+S GI EL + PY ++N
Sbjct: 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVL 64
++LR+ +H N + + G +D+ A +V ++C GS+ + V + + ++ I
Sbjct: 84 AVLRKTRHVNILLFMGYMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYWMA 118
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ WMA
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEI 151
PEVI D + + DV+S GI L E+
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V ++C GS+ + V + + ++ I +G++YLH+ IHRD+K+ NI L E
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
Query: 675 TGTVKL 680
TVK+
Sbjct: 168 GLTVKI 173
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 44/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSRF------ 109
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ----------DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG-W 158
Query: 343 SIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P+ ++ GT ++ PE+I EG+ +D KVD+WSLG+ C E PP+
Sbjct: 159 SVHAPSSRRDTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ R E+ A + + L+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALS 126
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P+ ++ GT ++ PE+I
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG-WSVHAPSSRRDTLCGTLDYLPPEMI--- 182
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 183 -EGRMHDEKVDLWSLGV 198
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ R E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 89 LILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 147
Query: 675 TGTVKL 680
G +K+
Sbjct: 148 NGELKI 153
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ IG GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +K+ADFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +K+ADFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 175 DQQGYIKV 182
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ IG GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGG-----------------DMFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +K+ADFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVL 64
+L+ + P ++ + + ++VMEY G D+ +R E + ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVIL 123
YLHSL I+RD+K N+L+ + G +K+ADFG A +K GTP ++APE+IL
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 124 AMDEGQYDGKVDVWSLGI 141
+ Y+ VD W+LG+
Sbjct: 212 SKG---YNKAVDWWALGV 226
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G D+ +R E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 176 QQGYIKV 182
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ IG GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGG-----------------DMFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +K+ADFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVL 64
+L+ + P ++ + + ++VMEY G D+ +R E + ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVIL 123
YLHSL I+RD+K N+L+ + G +K+ADFG A +K GTP ++APE+IL
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 124 AMDEGQYDGKVDVWSLGI 141
+ Y+ VD W+LG+
Sbjct: 212 SKG---YNKAVDWWALGV 226
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G D+ +R E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 176 QQGYIKV 182
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 44/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ R +G G FG VY AR S+ I+A+K + + A + +E+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 224 TIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ G + +L++EY LG+ + RE LQ+L F
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGT---------VYRE---------LQKLSRF------ 109
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ A + + L+Y HS IHRD+K N+LL G +K+ADFG
Sbjct: 110 ----------DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG-W 158
Query: 343 SIKCPAN---SFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P++ + GT ++ PE+I EG+ +D KVD+WSLG+ C E PP+
Sbjct: 159 SVHAPSSRRTTLCGTLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + G + +L++EY LG+ ++ R E+ A + + L+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALS 126
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAM 125
Y HS IHRD+K N+LL G +K+ADFG S+ P++ + GT ++ PE+I
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG-WSVHAPSSRRTTLCGTLDYLPPEMI--- 182
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+WSLG+
Sbjct: 183 -EGRMHDEKVDLWSLGV 198
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY LG+ ++ R E+ A + + L+Y HS IHRD+K N+LL
Sbjct: 89 LILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 147
Query: 675 TGTVKL 680
G +K+
Sbjct: 148 NGELKI 153
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 113/241 (46%), Gaps = 46/241 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI--LKEIRFLRQLK- 220
+E + EIG G++G VY AR S VA+K + I ++E+ LR+L+
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 221 --HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ-LKCFT 277
HPN + +M+ C S +D RE V + + Q L+ +
Sbjct: 71 FEHPNVVR-------------LMDVCATSRTD--------REIKVTLVFEHVDQDLRTYL 109
Query: 278 EHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
+ K P L E I + LRGL++LH+ +HRD+K NIL+T GTV
Sbjct: 110 D----------KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV 159
Query: 335 KLADFGSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
KLADFG A I + V T ++ APEV+L + Y VD+WS+G E+ RK
Sbjct: 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRK 216
Query: 392 P 392
P
Sbjct: 217 P 217
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 6 SLLRQLK---HPNTIEYRGCYL-----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEI 56
+LLR+L+ HPN + R+ LV E+ ++ P L E I
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 57 AAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGT 113
+ LRGL++LH+ +HRD+K NIL+T GTVKLADFG A I + V T
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVT 182
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
++ APEV+L + Y VD+WS+G
Sbjct: 183 LWYRAPEVLL---QSTYATPVDMWSVG 206
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 115/239 (48%), Gaps = 45/239 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK--- 220
+E + EIG G++G VY AR S VA+K + + + + +E+ LR+L+
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAFE 64
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ-LKCFTEH 279
HPN + +M+ C S +D RE V + + Q L+ + +
Sbjct: 65 HPNVVR-------------LMDVCATSRTD--------REIKVTLVFEHVDQDLRTYLD- 102
Query: 280 FALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
K P L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 103 ---------KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
Query: 337 ADFGSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
ADFG A I + + V T ++ APEV+L + Y VD+WS+G E+ RKP
Sbjct: 154 ADFGLARIYSYQMALDPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKP 209
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 6 SLLRQLK---HPNTIEYRGCYL-----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEI 56
+LLR+L+ HPN + R+ LV E+ ++ P L E I
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 57 AAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGT 113
+ LRGL++LH+ +HRD+K NIL+T GTVKLADFG A I + + V T
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
++ APEV+L + Y VD+WS+G
Sbjct: 175 LWYRAPEVLL---QSTYATPVDMWSVG 198
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 61
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS+ +H
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSL-----------YH------------- 96
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
H + FE+ K + I RG++YLH+ IHRD+K+ NI L E TVK
Sbjct: 97 -HLHASETKFEMKK-------LIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 148
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D Y + DV++ GI EL
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 209 GQLPYSNIN 217
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLR 65
+LR+ +H N + + G + A +V ++C GS+ + + + +++ I R
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYWMAP 119
G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ WMAP
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 120 EVILAMDEGQYDGKVDVWSLGIT 142
EVI D Y + DV++ GI
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIV 202
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 614 PQL--VMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
PQL V ++C GS+ + + + +++ I RG++YLH+ IHRD+K+ NI
Sbjct: 80 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNI 139
Query: 671 LLTETGTVKL 680
L E TVK+
Sbjct: 140 FLHEDNTVKI 149
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 114/239 (47%), Gaps = 45/239 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK--- 220
+E + EIG G++G VY AR S VA+K + + + + +E+ LR+L+
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAFE 64
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ-LKCFTEH 279
HPN + +M+ C S +D RE V + + Q L+ + +
Sbjct: 65 HPNVVR-------------LMDVCATSRTD--------REIKVTLVFEHVDQDLRTYLD- 102
Query: 280 FALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
K P L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 103 ---------KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
Query: 337 ADFGSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
ADFG A I + V T ++ APEV+L + Y VD+WS+G E+ RKP
Sbjct: 154 ADFGLARIYSYQMALAPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKP 209
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 6 SLLRQLK---HPNTIEYRGCYL-----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEI 56
+LLR+L+ HPN + R+ LV E+ ++ P L E I
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 57 AAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGT 113
+ LRGL++LH+ +HRD+K NIL+T GTVKLADFG A I + V T
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVT 174
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
++ APEV+L + Y VD+WS+G
Sbjct: 175 LWYRAPEVLL---QSTYATPVDMWSVG 198
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 62
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 106
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 107 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 149
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 210 GQLPYSNIN 218
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 120 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIV 203
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 137
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 138 NNIFLHEDLTVKI 150
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 84
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 85 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 128
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 129 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 171
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 172 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 232 GQLPYSNIN 240
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 84 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 141
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 142 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIV 225
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 103 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 159
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 160 NNIFLHEDLTVKI 172
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 59
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 103
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 104 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 146
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 147 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 207 GQLPYSNIN 215
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 59 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 116
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 117 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIV 200
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 78 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 134
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 135 NNIFLHEDLTVKI 147
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 85
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 129
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 130 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 172
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 173 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 233 GQLPYSNIN 241
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 142
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 143 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIV 226
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 160
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 161 NNIFLHEDLTVKI 173
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 62
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 106
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 107 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 149
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 210 GQLPYSNIN 218
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 120 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIV 203
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 137
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 138 NNIFLHEDLTVKI 150
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 114/239 (47%), Gaps = 45/239 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK--- 220
+E + EIG G++G VY AR S VA+K + + + + +E+ LR+L+
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAFE 64
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ-LKCFTEH 279
HPN + +M+ C S +D RE V + + Q L+ + +
Sbjct: 65 HPNVVR-------------LMDVCATSRTD--------REIKVTLVFEHVDQDLRTYLD- 102
Query: 280 FALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
K P L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 103 ---------KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
Query: 337 ADFGSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
ADFG A I + V T ++ APEV+L + Y VD+WS+G E+ RKP
Sbjct: 154 ADFGLARIYSYQMALFPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKP 209
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 6 SLLRQLK---HPNTIEYRGCYL-----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEI 56
+LLR+L+ HPN + R+ LV E+ ++ P L E I
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 57 AAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGT 113
+ LRGL++LH+ +HRD+K NIL+T GTVKLADFG A I + V T
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVT 174
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
++ APEV+L + Y VD+WS+G
Sbjct: 175 LWYRAPEVLL---QSTYATPVDMWSVG 198
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L E I + LRGL++LH+ +HRD+K NIL+T GTVKL
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 57
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKFEMI----------- 104
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
++ I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 105 --------------------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 205 GQLPYSNIN 213
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 115 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 132
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 133 NNIFLHEDLTVKI 145
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 135/338 (39%), Gaps = 83/338 (24%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF-LRQLKHP 222
E+L E+G G+ G V+ R + ++A+K+M G + E+ IL ++ L+ P
Sbjct: 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCP 84
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
++ G ++ + ++ ME +G+ + E + R+Q
Sbjct: 85 YIVQCFGTFITNTDVFIAMEL-MGTCA--------------EKLKKRMQG---------- 119
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL-GRIHRDVKAGNILLTETGTVKLADFGS 341
P+ E + + +++ L YL G IHRDVK NILL E G +KL DFG
Sbjct: 120 --------PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI 171
Query: 342 ASIKC---PANSFVGTPYWMAPEVILAMDEGQ--YDGKVDVWSLGITCIELAERKPPYFN 396
+ + G +MAPE I D + YD + DVWSLGI+ +ELA + PY N
Sbjct: 172 SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
Query: 397 MNA-MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCL 455
L + Q + P L H+
Sbjct: 232 CKTDFEVLTKVLQEEPPLLPG-----------------------------HMG------- 255
Query: 456 QSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
+S F FV CL K+ RP +LL H + R
Sbjct: 256 ----FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L+ P ++ G ++ + ++ ME A + + + P+ E + + +++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 67 LNYLHSL-GRIHRDVKAGNILLTETGTVKLADFGSASIKC---PANSFVGTPYWMAPEVI 122
L YL G IHRDVK NILL E G +KL DFG + + G +MAPE I
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 123 LAMDEGQ--YDGKVDVWSLGIT 142
D + YD + DVWSLGI+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGIS 218
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSL-GRIHRDVKAGNILLTE 674
+ ME A + + + P+ E + + +++ L YL G IHRDVK NILL E
Sbjct: 101 IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE 160
Query: 675 TGTVKL 680
G +KL
Sbjct: 161 RGQIKL 166
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K +I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 175 DQQGYIKV 182
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 136/343 (39%), Gaps = 86/343 (25%)
Query: 161 EKIFEDLRE---IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
EKI ED + +G GSF VY A + + VAIK + A + E++
Sbjct: 8 EKI-EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
QLKHP+ +E + + +LV+E C G NR + +
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHN------------------GEMNRYLKNRV-- 106
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+P E E ++ G+ YLHS G +HRD+ N+LLT +K+A
Sbjct: 107 ------------KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA 154
Query: 338 DFGSAS-IKCPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG A+ +K P + GTP +++PE+ G + DVWSLG L +PP
Sbjct: 155 DFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL---ESDVWSLGCMFYTLLIGRPP 211
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
+ DT ++++ V+ +A + P
Sbjct: 212 F---------------DTDTVKNTLNKVV------------------------LADYEMP 232
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRS 496
S + D + L +NPADR S +L H ++R S
Sbjct: 233 SFLSIEAKD----LIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
QLKHP+ +E + + +LV+E C G + ++ +P E E ++ G+
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPAN---SFVGTPYWMAPEVILA 124
YLHS G +HRD+ N+LLT +K+ADFG A+ +K P + GTP +++PE+
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 125 MDEGQYDGKVDVWSLG 140
G + DVWSLG
Sbjct: 187 SAHGL---ESDVWSLG 199
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV+E C G + ++ +P E E ++ G+ YLHS G +HRD+ N+LLT
Sbjct: 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR 147
Query: 675 TGTVKL 680
+K+
Sbjct: 148 NMNIKI 153
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K + GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWTLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K + GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ ++ E+
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAP-TPQQLQAFKNEVGV 73
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS+ +H
Sbjct: 74 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSL-----------YH------------- 108
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
H + FE+ K + I RG++YLH+ IHRD+K+ NI L E TVK
Sbjct: 109 -HLHASETKFEMKK-------LIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 160
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A+ K G+ WMAPEVI D Y + DV++ GI EL
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 221 GQLPYSNIN 229
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLR 65
+LR+ +H N + + G + A +V ++C GS+ + + + +++ I R
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYWMAP 119
G++YLH+ IHRD+K+ NI L E TVK+ DFG A+ K G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGIT 142
EVI D Y + DV++ GI
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIV 214
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 614 PQL--VMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
PQL V ++C GS+ + + + +++ I RG++YLH+ IHRD+K+ NI
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNI 151
Query: 671 LLTETGTVKL 680
L E TVK+
Sbjct: 152 FLHEDNTVKI 161
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 175 DQQGYIKV 182
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 128
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 129 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 172
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K + GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 173 FAKRVKGRTWTLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 225
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 136
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K + GTP ++APE+I
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEII 196
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 197 LSKG---YNKAVDWWALGV 212
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 104 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 160
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 161 DQQGYIQV 168
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 57
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G A +V ++C GS S +H IE +F
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 101
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 102 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A++K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 205 GQLPYSNIN 213
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G A +V ++C GS+ IIE +K +IA +
Sbjct: 57 VLRKTRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A++K G+ W
Sbjct: 115 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 613 SPQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVK 666
+PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLK 131
Query: 667 AGNILLTETGTVKL 680
+ NI L E TVK+
Sbjct: 132 SNNIFLHEDLTVKI 145
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA+K + + L +K + +E+R ++ L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G+P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 185 QG---KKYDGPEVDVWSLGVILYTL 206
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DMNIKI 154
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA+K + + L +K + +E+R ++ L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G+P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGI 141
+YDG +VDVWSLG+
Sbjct: 185 QG---KKYDGPEVDVWSLGV 201
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DMNIKI 154
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVL 64
+L+ + P ++ + + ++VMEY G S + + + E + ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIV 151
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVIL 123
YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+IL
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 124 AMDEGQYDGKVDVWSLGI 141
+ Y+ VD W+LG+
Sbjct: 212 SKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G S + + + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 176 QQGYIKV 182
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 163
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 164 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K + GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 208 FAKRVKGATWTLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 171
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K + GTP ++APE+I
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEII 231
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 232 LSKG---YNKAVDWWALGV 247
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 139 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 196 DQQGYIQV 203
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E +++IG G+FG R S E+VA+K + G++ A A++ +EI R L+HPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-GEKIA---ANVKREIINHRSLRHPN 76
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L +VMEY G + R+ F+E A F
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGE-----------------LFERICNAGRFSEDEARF 119
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ ++ G++Y H++ HRD+K N LL + +K+ DFG
Sbjct: 120 FFQ----------------QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 163
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
S+ + S VGTP ++APEV+L + +YDGKV DVWS G+T
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLL---KKEYDGKVADVWSCGVT 206
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 34/204 (16%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L +VMEY G E+ +R E+E +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGG-----ELFERICNAGRFSEDEARFFFQQL 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
+ G++Y H++ HRD+K N LL + +K+ DFG S+ + S VGTP ++A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 119 PEVILAMDEGQYDGKV-DVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGA 177
PEV+L + +YDGKV DVWS G+T + + + EDPE+ ++ R+ H
Sbjct: 185 PEVLL---KKEYDGKVADVWSCGVTLYVM----LVGAYPFEDPEEP-KNFRKTIHRILNV 236
Query: 178 VYY----------ARCLVSREIVA 191
Y R L+SR VA
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVA 260
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
+VMEY G E+ +R E+E ++ G++Y H++ HRD+K N
Sbjct: 92 IVMEYASGG-----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 671 LLTETGTVKLDTPD 684
LL + +L D
Sbjct: 147 LLDGSPAPRLKICD 160
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K +I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 119 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 176 DQQGYIKV 183
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE +R +G GSFG V + +E M L KQ K I L E R + +
Sbjct: 44 FERIRTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++V+EY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +K+ADFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLH 71
P ++ + + ++V+EY G S + + + E + ++ YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLH 159
Query: 72 SLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQY 130
SL I+RD+K N+L+ + G +K+ADFG A +K GTP ++APE+IL+ Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKG---Y 216
Query: 131 DGKVDVWSLGI 141
+ VD W+LG+
Sbjct: 217 NKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 645 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ ++ YLHSL I+RD+K N+L+ + G +K+
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 183
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLAGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 85
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 129
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 130 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 172
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A+ K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 173 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 233 GQLPYSNIN 241
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 142
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A+ K G+ W
Sbjct: 143 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIV 226
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 160
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 161 NNIFLHEDLTVKI 173
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P + + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVL 64
+L+ + P + + + ++VMEY G S + + + E + ++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIV 152
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVIL 123
YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+IL
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 124 AMDEGQYDGKVDVWSLGI 141
+ Y+ VD W+LG+
Sbjct: 213 SKG---YNKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G S + + + E + ++ YLHSL I+RD+K N+++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 177 QQGYIKV 183
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P + + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P + + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 119 MVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 176 DQQGYIKV 183
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 77
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKF-------------- 121
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
E L + I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 122 --EMIKLID---------------IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 164
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A+ K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 165 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 225 GQLPYSNIN 233
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 77 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 134
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A+ K G+ W
Sbjct: 135 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIV 218
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 96 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 152
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 153 NNIFLHEDLTVKI 165
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFXEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA+K + + L +K + +E+R ++ L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 185 QG---KKYDGPEVDVWSLGVILYTL 206
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DMNIKI 154
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 129
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ E G +++ DFG
Sbjct: 130 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 174 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 226
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 137
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ E G +++ DFG A +K GTP ++APE+I
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 197
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 198 LSKG---YNKAVDWWALGV 213
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 105 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 161
Query: 673 TETGTVKL 680
E G +++
Sbjct: 162 DEQGYIQV 169
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 36 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 135
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 136 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 232
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 143
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 203
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 204 LSKG---YNKAVDWWALGV 219
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 111 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 168 DQQGYIQV 175
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 64 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 163
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 164 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVL 64
+L+ + P ++ + + ++VMEY G S + + + E + ++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIV 172
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVIL 123
YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+IL
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 124 AMDEGQYDGKVDVWSLGI 141
+ Y+ VD W+LG+
Sbjct: 233 SKG---YNKAVDWWALGV 247
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G S + + + E + ++ YLHSL I+RD+K N+L+
Sbjct: 139 MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 674 ETGTVKL 680
+ G +++
Sbjct: 197 QQGYIQV 203
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 57
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G + A +V ++C GS S +H IE +F +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLA-IVTQWCEGS-SLYHHLHIIETKFEMI----------- 104
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
++ I +G++YLH+ IHRD+K+ NI L E TVK
Sbjct: 105 --------------------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A+ K G+ WMAPEVI D+ Y + DV++ GI EL
Sbjct: 145 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 205 GQLPYSNIN 213
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS----DIIEVHKRPLKEEEIAAICSG 62
+LR+ +H N + + G + A +V ++C GS+ IIE +K +IA +
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA- 114
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYW 116
+G++YLH+ IHRD+K+ NI L E TVK+ DFG A+ K G+ W
Sbjct: 115 --QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEVI D+ Y + DV++ GI
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 614 PQL--VMEYCLGSAS----DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
PQL V ++C GS+ IIE +K +IA + +G++YLH+ IHRD+K+
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA---QGMDYLHAKSIIHRDLKS 132
Query: 668 GNILLTETGTVKL 680
NI L E TVK+
Sbjct: 133 NNIFLHEDLTVKI 145
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 43/249 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D E P+ + IG GSFG VY + VA+K ++ + ++ E+
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLN-VTAPTPQQLQAFKNEVGV 73
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
LR+ +H N + + G A +V ++C GS S +H E +F ++
Sbjct: 74 LRKTRHVNILLFMGYSTAPQLA-IVTQWCEGS-SLYHHLHASETKFEMK----------- 120
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
++ I RG++YLH+ IHRD+K+ NI L E TVK
Sbjct: 121 --------------------KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 160
Query: 336 LADFGSASIKC------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ DFG A+ K G+ WMAPEVI D Y + DV++ GI EL
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 390 RKPPYFNMN 398
+ PY N+N
Sbjct: 221 GQLPYSNIN 229
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLR 65
+LR+ +H N + + G A +V ++C GS+ + + + +++ I R
Sbjct: 73 VLRKTRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC------PANSFVGTPYWMAP 119
G++YLH+ IHRD+K+ NI L E TVK+ DFG A+ K G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGIT 142
EVI D Y + DV++ GI
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIV 214
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 613 SPQL--VMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
+PQL V ++C GS+ + + + +++ I RG++YLH+ IHRD+K+ N
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN 150
Query: 670 ILLTETGTVKL 680
I L E TVK+
Sbjct: 151 IFLHEDNTVKI 161
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA++ + + L +K + +E+R ++ L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G+P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 185 QG---KKYDGPEVDVWSLGVILYTL 206
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DMNIKI 154
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLXGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ VAIK + + L +K + +E+R ++ L HPN
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK---LFREVRIMKILNHPNI 73
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +L+MEY G +F+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGE---------------------------------VFD 100
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-- 342
+ V +KE+E + ++ + Y H +HRD+KA N+LL +K+ADFG +
Sbjct: 101 YLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE 160
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
++ ++F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 161 FTVGGKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +L+MEY G D + H R +KE+E + ++
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVS 122
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG + ++ ++F G+P + APE+
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELF 182
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 183 QG---KKYDGPEVDVWSLGVILYTL 204
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L+MEY G D + H R +KE+E + ++ + Y H +HRD+KA N+LL
Sbjct: 88 LIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA 146
Query: 675 TGTVKL 680
+K+
Sbjct: 147 DMNIKI 152
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVK---HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVK---HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVK---HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + + + A M L KQ K I L E R L+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P + + + ++VMEY G M + L+++ F E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-----------------MFSHLRRIGRFXEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +K+ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P + + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFXEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +K+ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 119 MVMEYAPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 673 TETGTVKL 680
+ G +K+
Sbjct: 176 DQQGYIKV 183
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA+K + + L +K + +E+R ++ L HPN
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 68
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 95
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 96 YLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 155
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 156 FTFGNKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+++ L HPN ++ + T +LVMEY G V +KE+E A ++
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA 118
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVIL 123
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G+P + APE+
Sbjct: 119 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 178
Query: 124 AMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 179 G---KKYDGPEVDVWSLGVILYTL 199
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVMEY G V +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 83 LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 142
Query: 676 GTVKL 680
+K+
Sbjct: 143 MNIKI 147
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 50/244 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSR-EIVAIKKMSYLGKQCAEKWADI--LKEIRFLRQLK 220
+E + EIG G++G V+ AR L + VA+K++ Q E+ + ++E+ LR L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLE 69
Query: 221 ---HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
HPN + + + C S +D R +L
Sbjct: 70 TFEHPNVVR-------------LFDVCTVSRTD------------------RETKLTLVF 98
Query: 278 EH----FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
EH + +V + + E I + +LRGL++LHS +HRD+K NIL+T +G
Sbjct: 99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 334 VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+KLADFG A S + S V T ++ APEV+L + Y VD+WS+G E+ R
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRR 215
Query: 391 KPPY 394
KP +
Sbjct: 216 KPLF 219
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 20/173 (11%)
Query: 8 LRQLKHPNTIE-YRGCYL----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICS 61
L +HPN + + C + R+ LV E+ + ++ P + E I +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMA 118
+LRGL++LHS +HRD+K NIL+T +G +KLADFG A S + S V T ++ A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIG 171
PEV+L + Y VD+WS+G AE+F ++ + D+ ++G
Sbjct: 188 PEVLL---QSSYATPVDLWSVGCI--------FAEMFRRKPLFRGSSDVDQLG 229
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E I + +LRGL++LHS +HRD+K NIL+T +G +KL
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE ++ +G GSFG V + +E M L KQ K I L E R L+ +
Sbjct: 36 FERIKTLGTGSFGRVMLVK---HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-----------------MFSHLRRIGRFXEPH 135
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 136 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 232
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQI 143
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 203
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 204 LSKG---YNKAVDWWALGV 219
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 111 MVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 168 DQQGYIQV 175
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 143
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 144 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 151
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 212 LSKG---YNKAVDWWALGV 227
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 119 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 176 DQQGYIQV 183
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 83 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 116
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 117 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCI 255
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 181 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 165
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA++ + + L +K + +E+R ++ L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LVMEY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 345 KCPANS---FVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDEFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS---FVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N F G+P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 185 QG---KKYDGPEVDVWSLGVILYTL 206
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DMNIKI 154
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 169
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 168 REIGHGSFGAVYYAR-CLVSREI-VAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTI 225
+ IG G+F V AR L RE+ V I + L +K + +E+R ++ L HPN +
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK---LFREVRIMKILNHPNIV 77
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ + T +LVMEY G +F++
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGE---------------------------------VFDY 104
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA--- 342
V +KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG +
Sbjct: 105 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 343 SIKCPANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
++ ++F G+P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 165 TVGNKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +LVMEY G D + H R +KE+E A ++
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG + ++ ++F G+P + APE+
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF 185
Query: 123 LAMDEGQYDG-KVDVWSLGI 141
+YDG +VDVWSLG+
Sbjct: 186 QG---KKYDGPEVDVWSLGV 202
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G D + H R +KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 91 LVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL-- 147
Query: 675 TGTVKLDTPDEQAGNDSSKSNSITS 699
G + + D N+ + N + +
Sbjct: 148 DGDMNIKIADFGFSNEFTVGNKLDT 172
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 83 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 116
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 117 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCI 255
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 181 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 215
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 165
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIR-FLRQLKHP 222
F L+ IG GSFG V AR A+K + ++ I+ E L+ +KHP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ + + V++Y G E +H LQ+ +CF E A
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGG----------ELFYH-------LQRERCFLEPRAR 142
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
F EIA+ L YLHSL ++RD+K NILL G + L DFG
Sbjct: 143 F---------YAAEIAS-------ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC 186
Query: 343 SIKCPANS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
NS F GTP ++APEV + + YD VD W LG E+ PP+++ N
Sbjct: 187 KENIEHNSTTSTFCGTPEYLAPEV---LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
Query: 399 A 399
Sbjct: 244 T 244
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 1 MPAGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
M + LL+ +KHP + + + V++Y G +R E
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS----FVGTPYW 116
+ + L YLHSL ++RD+K NILL G + L DFG NS F GTP +
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
+APEV + + YD VD W LG
Sbjct: 206 LAPEV---LHKQPYDRTVDWWCLG 226
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
V++Y G +R E + + L YLHSL ++RD+K NILL
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ 175
Query: 676 GTVKLDTPDEQAGNDSSKSNSITS 699
G + L D ++ + NS TS
Sbjct: 176 GHIVLT--DFGLCKENIEHNSTTS 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ VAIK + + L +K + +E+R ++ L HPN
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK---LFREVRIMKILNHPNI 76
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +L+MEY G +F+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGE---------------------------------VFD 103
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-- 342
+ V +KE+E + ++ + Y H +HRD+KA N+LL +K+ADFG +
Sbjct: 104 YLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE 163
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
++ ++F G P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 164 FTVGGKLDAFCGAPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HPN ++ + T +L+MEY G D + H R +KE+E + ++
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVS 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG + ++ ++F G P + APE+
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185
Query: 123 LAMDEGQYDG-KVDVWSLGITPGSL 146
+YDG +VDVWSLG+ +L
Sbjct: 186 QG---KKYDGPEVDVWSLGVILYTL 207
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L+MEY G D + H R +KE+E + ++ + Y H +HRD+KA N+LL
Sbjct: 91 LIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA 149
Query: 675 TGTVKL 680
+K+
Sbjct: 150 DMNIKI 155
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 90
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 91 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 124
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 125 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 180
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 239 KHYLDQLNHILGILGSPSQEDLNCI 263
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 129 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 189 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 223
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 129 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 173
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 83 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 116
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 117 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCI 255
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 181 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 215
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 165
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 84
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 85 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 118
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 119 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCI 257
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 183 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 217
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 167
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 50/244 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSR-EIVAIKKMSYLGKQCAEKWADI--LKEIRFLRQLK 220
+E + EIG G++G V+ AR L + VA+K++ Q E+ + ++E+ LR L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLE 69
Query: 221 ---HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
HPN + + + C S +D R +L
Sbjct: 70 TFEHPNVVR-------------LFDVCTVSRTD------------------RETKLTLVF 98
Query: 278 EH----FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
EH + +V + + E I + +LRGL++LHS +HRD+K NIL+T +G
Sbjct: 99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 334 VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+KLADFG A S + S V T ++ APEV+L + Y VD+WS+G E+ R
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRR 215
Query: 391 KPPY 394
KP +
Sbjct: 216 KPLF 219
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 20/173 (11%)
Query: 8 LRQLKHPNTIE-YRGCYL----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICS 61
L +HPN + + C + R+ LV E+ + ++ P + E I +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMA 118
+LRGL++LHS +HRD+K NIL+T +G +KLADFG A S + S V T ++ A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIG 171
PEV+L + Y VD+WS+G AE+F ++ + D+ ++G
Sbjct: 188 PEVLL---QSSYATPVDLWSVGCI--------FAEMFRRKPLFRGSSDVDQLG 229
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E I + +LRGL++LHS +HRD+K NIL+T +G +KL
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 56/269 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 102
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHV----EGMGNRLQQLKCFTEH 279
I +DII IE+ V MG L +L T+H
Sbjct: 103 II---------------------GINDIIRAPTIEQMKDVYLVTHLMGADLYKL-LKTQH 140
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DF
Sbjct: 141 ------------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDF 188
Query: 340 GSASIKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
G A + P +V T ++ APE++L + Y +D+WS+G E+ +P
Sbjct: 189 GLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 393 PYFNMNAMSALYHI-------AQNDTPCL 414
+ + + L HI +Q D C+
Sbjct: 247 IFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 201 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 235
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFAEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFAEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ +++IG G+FG R +++E+VA+K Y+ + A ++ +EI R L+HPN
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVK---YIERGAAID-ENVQREIINHRSLRHPN 77
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L ++MEY G + R+ F+E A F
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGE-----------------LYERICNAGRFSEDEARF 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ +L G++Y HS+ HRD+K N LL + +K+ DFG
Sbjct: 121 FFQ----------------QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGY 164
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
S+ + S VGTP ++APEV+L +YDGK+ DVWS G+T
Sbjct: 165 SKSSVLHSQPKSTVGTPAYIAPEVLL---RQEYDGKIADVWSCGVT 207
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 19/145 (13%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L ++MEY G E+++R E+E +
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGG-----ELYERICNAGRFSEDEARFFFQQL 125
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
L G++Y HS+ HRD+K N LL + +K+ DFG S+ + S VGTP ++A
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 185
Query: 119 PEVILAMDEGQYDGKV-DVWSLGIT 142
PEV+L +YDGK+ DVWS G+T
Sbjct: 186 PEVLL---RQEYDGKIADVWSCGVT 207
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
++MEY G E+++R E+E +L G++Y HS+ HRD+K N
Sbjct: 93 IIMEYASGG-----ELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 671 LLTETGTVKLDTPD 684
LL + +L D
Sbjct: 148 LLDGSPAPRLKICD 161
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 102
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 103 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 136
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 137 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 192
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 251 KHYLDQLNHILGILGSPSQEDLNCI 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 201 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 235
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 185
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 50/242 (20%)
Query: 162 KIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
++++ ++++G G++G V R V R I I+K S + +L+E+ L+
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV----STSSNSKLLEEVAVLKL 92
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
L HPN ++ + +LVME G
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGE------------------------------ 122
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVK 335
LF+ +H+ E + A I VL G+ YLH +HRD+K N+LL + +K
Sbjct: 123 ---LFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK 179
Query: 336 LADFGSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
+ DFG +++ + +GT Y++APEV+ +YD K DVWS+G+ L P
Sbjct: 180 IVDFGLSAVFENQKKMKERLGTAYYIAPEVL----RKKYDEKCDVWSIGVILFILLAGYP 235
Query: 393 PY 394
P+
Sbjct: 236 PF 237
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
++L+ L HPN ++ + +LVME Y G D I +H+ E + A I VL
Sbjct: 88 AVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-IHRMKFNEVDAAVIIKQVL 146
Query: 65 RGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSASI---KCPANSFVGTPYWMA 118
G+ YLH +HRD+K N+LL + +K+ DFG +++ + +GT Y++A
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV+ +YD K DVWS+G+
Sbjct: 207 PEVL----RKKYDEKCDVWSIGV 225
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
LVME Y G D I +H+ E + A I VL G+ YLH +HRD+K N+LL
Sbjct: 113 LVMECYKGGELFDEI-IHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLL 169
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 50/244 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSR-EIVAIKKMSYLGKQCAEKWADI--LKEIRFLRQLK 220
+E + EIG G++G V+ AR L + VA+K++ Q E+ + ++E+ LR L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLE 69
Query: 221 ---HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
HPN + + + C S +D R +L
Sbjct: 70 TFEHPNVVR-------------LFDVCTVSRTD------------------RETKLTLVF 98
Query: 278 EH----FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
EH + +V + + E I + +LRGL++LHS +HRD+K NIL+T +G
Sbjct: 99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 334 VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+KLADFG A S + S V T ++ APEV+L + Y VD+WS+G E+ R
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRR 215
Query: 391 KPPY 394
KP +
Sbjct: 216 KPLF 219
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 8 LRQLKHPNTIE-YRGCYL----RDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICS 61
L +HPN + + C + R+ LV E+ + ++ P + E I +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMA 118
+LRGL++LHS +HRD+K NIL+T +G +KLADFG A S + S V T ++ A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV+L + Y VD+WS+G
Sbjct: 188 PEVLL---QSSYATPVDLWSVG 206
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E I + +LRGL++LHS +HRD+K NIL+T +G +KL
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFXEPH 163
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 164 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQI 171
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 231
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 232 LSKG---YNKAVDWWALGV 247
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 139 MVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 196 DQQGYIQV 203
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 46/238 (19%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+IG GSFG V+ A S VA+K + AE+ + L+E+ +++L+HPN + +
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--VAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G + +V EY L S + R H G
Sbjct: 101 GAVTQPPNLSIVTEY-LSRGS-------LYRLLHKSGA---------------------- 130
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKLADFGSASIKC 346
+ L E ++ V +G+NYLH+ +HRD+K+ N+L+ + TVK+ DFG + +K
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK- 189
Query: 347 PANSFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
A+ F+ GTP WMAPEV+ DE + K DV+S G+ ELA + P+ N+N
Sbjct: 190 -ASXFLXSKXAAGTPEWMAPEVL--RDEPS-NEKSDVYSFGVILWELATLQQPWGNLN 243
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 18/148 (12%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK----RPLKEEEIAAICS 61
+++++L+HPN + + G + +V EY L S +HK L E ++
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEY-LSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 62 GVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV------GT 113
V +G+NYLH+ +HRD+K+ N+L+ + TVK+ DFG + +K A+ F+ GT
Sbjct: 145 DVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGT 202
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P WMAPEV+ DE + K DV+S G+
Sbjct: 203 PEWMAPEVL--RDEPS-NEKSDVYSFGV 227
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKL 680
L E ++ V +G+NYLH+ +HRD+K+ N+L+ + TVK+
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV 180
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E +++IG G+FG R + E+VA+K + G++ E ++ +EI R L+HPN
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIER-GEKIDE---NVKREIINHRSLRHPN 76
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L +VMEY G + R+ F+E A F
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGE-----------------LFERICNAGRFSEDEARF 119
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ ++ G++Y H++ HRD+K N LL + +K+ADFG
Sbjct: 120 FFQ----------------QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY 163
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
++ + S VGTP ++APEV+L + +YDGKV DVWS G+T
Sbjct: 164 SKASVLHSQPKSAVGTPAYIAPEVLL---KKEYDGKVADVWSCGVT 206
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L +VMEY G E+ +R E+E +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGG-----ELFERICNAGRFSEDEARFFFQQL 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
+ G++Y H++ HRD+K N LL + +K+ADFG ++ + S VGTP ++A
Sbjct: 125 ISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIA 184
Query: 119 PEVILAMDEGQYDGKV-DVWSLGIT 142
PEV+L + +YDGKV DVWS G+T
Sbjct: 185 PEVLL---KKEYDGKVADVWSCGVT 206
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
+VMEY G E+ +R E+E ++ G++Y H++ HRD+K N
Sbjct: 92 IVMEYASGG-----ELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENT 146
Query: 671 LLTETGTVKLDTPD 684
LL + +L D
Sbjct: 147 LLDGSPAPRLKIAD 160
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 42/236 (17%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+IG GSFG V+ A S VA+K + AE+ + L+E+ +++L+HPN + +
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--VAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G + +V EY L S + R H G
Sbjct: 101 GAVTQPPNLSIVTEY-LSRGS-------LYRLLHKSGA---------------------- 130
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKLADFGSASIKC 346
+ L E ++ V +G+NYLH+ +HR++K+ N+L+ + TVK+ DFG + +K
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190
Query: 347 ----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
+ S GTP WMAPEV+ DE + K DV+S G+ ELA + P+ N+N
Sbjct: 191 STFLSSKSAAGTPEWMAPEVL--RDEPS-NEKSDVYSFGVILWELATLQQPWGNLN 243
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK----RPLKEEEIAAICS 61
+++++L+HPN + + G + +V EY L S +HK L E ++
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEY-LSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 62 GVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKLADFGSASIKC----PANSFVGTPY 115
V +G+NYLH+ +HR++K+ N+L+ + TVK+ DFG + +K + S GTP
Sbjct: 145 DVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE 204
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPEV+ DE + K DV+S G+
Sbjct: 205 WMAPEVL--RDEPS-NEKSDVYSFGV 227
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKL 680
L E ++ V +G+NYLH+ +HR++K+ N+L+ + TVK+
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV 180
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 155 FDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA---DILK 211
D + K +E L +G G F VY AR + +IVAIKK+ LG + K L+
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK-LGHRSEAKDGINRTALR 61
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
EI+ L++L HPN I + LV ++ +E + V N L
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDF-------------METDLEVIIKDNSLV 108
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
L I A L+GL YLH +HRD+K N+LL E
Sbjct: 109 --------------------LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN 148
Query: 332 GTVKLADFGSA-SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
G +KLADFG A S P ++ V T ++ APE++ Y VD+W++G EL
Sbjct: 149 GVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR--MYGVGVDMWAVGCILAEL 206
Query: 388 AERKP 392
R P
Sbjct: 207 LLRVP 211
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL++L HPN I + LV ++ II+ + L I A L+
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
GL YLH +HRD+K N+LL E G +KLADFG A S P ++ V T ++ APE+
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 122 ILAMDEGQYDGKVDVWSLGITPGS--LKDPEIAELFDKEDPEKIFEDL 167
+ Y VD+W++G L+ P + D + +IFE L
Sbjct: 184 LFGAR--MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 229
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV ++ II+ + L I A L+GL YLH +HRD+K N+LL E
Sbjct: 89 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN 148
Query: 676 GTVKL 680
G +KL
Sbjct: 149 GVLKL 153
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFXEPH 137
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 138 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 181
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 182 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 234
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQI 145
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 205
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 206 LSKG---YNKAVDWWALGV 221
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 113 MVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 169
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 170 DQQGYIQV 177
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 43/293 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E E + + + IG+GSFG V+ A+ + S E VAIKK+ +++ + +E++ +R
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ-----DKRFKN--RELQIMR 87
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+KHPN ++ + + Y G D + ++ + E+ E + +
Sbjct: 88 IVKHPNVVDLKAFF-----------YSNGDKKDEVFLNLV-LEYVPETVYRA-------S 128
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 336
H+A K+ + I +LR L Y+HS+G HRD+K N+LL +G +KL
Sbjct: 129 RHYAKL-----KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL 183
Query: 337 ADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFGSA I P S + + Y+ APE+I Y +D+WS G EL + +P
Sbjct: 184 IDFGSAKILIAGEPNVSXICSRYYRAPELIFG--ATNYTTNIDIWSTGCVMAELMQGQPL 241
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISST-AERKPPYFNMNAMSALY 445
+ + + L I + L + IKT++ E K P + S ++
Sbjct: 242 FPGESGIDQLVEIIK----VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVF 290
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 6 SLLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYC---LGSASDIIEVHKRPLKEEEI 56
++R +KHPN ++ + + +D LV+EY + AS K+ + I
Sbjct: 84 QIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143
Query: 57 AAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVG 112
+LR L Y+HS+G HRD+K N+LL +G +KL DFGSA I P S +
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ Y+ APE+I Y +D+WS G
Sbjct: 204 SRYYRAPELIFG--ATNYTTNIDIWSTG 229
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+LR L Y+HS+G HRD+K N+LL +G +KL
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL 183
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 127/313 (40%), Gaps = 57/313 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIK--KMSYLGKQCAEKWADILKEIRFLRQLKH 221
F+ LR IG GS+ V R + I A+K K + W K + F + H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNH 80
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
P + C+ + + V+EY G D++ FH++
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGG--DLM--------FHMQ----------------- 113
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+R L EE + + LNYLH G I+RD+K N+LL G +KL D+G
Sbjct: 114 ------RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Query: 342 ASIKC-PANS---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ F GTP ++APE++ D Y VD W+LG+ E+ + P F++
Sbjct: 168 CKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSP-FDI 223
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP---- 453
+ +D P + D+ + + I R P ++ A S L D
Sbjct: 224 --------VGSSDNPDQNTEDY-LFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLG 274
Query: 454 CLQSSDWSDTFAH 466
CL + ++D H
Sbjct: 275 CLPQTGFADIQGH 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS 72
HP + C+ + + V+EY G +R L EE + + LNYLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANS---FVGTPYWMAPEVILAMDEG 128
G I+RD+K N+LL G +KL D+G P ++ F GTP ++APE++ D
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-- 197
Query: 129 QYDGKVDVWSLGI 141
Y VD W+LG+
Sbjct: 198 -YGFSVDWWALGV 209
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
V+EY G +R L EE + + LNYLH G I+RD+K N+LL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 676 GTVKL 680
G +KL
Sbjct: 158 GHIKL 162
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 41/250 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 83 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 116
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 117 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 397 MNAMSALYHI 406
+ + L HI
Sbjct: 231 KHYLDQLNHI 240
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 181 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 165
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 41/250 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 83 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 116
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 117 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR 172
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 397 MNAMSALYHI 406
+ + L HI
Sbjct: 231 KHYLDQLNHI 240
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 181 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 165
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ L+ IG G++G V A V + VAIKK+S Q + L+EI+ L + +H N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT--LREIQILLRFRHEN 102
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I R LR T L + D+ +I ++ + L+ + +H F
Sbjct: 103 VIGIRDI-LRAST--------LEAMRDV----YIVQDLMETDLYKLLKSQQLSNDHICYF 149
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ +LRGL Y+HS +HRD+K N+L+ T +K+ DFG A
Sbjct: 150 LYQ-----------------ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
Query: 344 IKCPANSFVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
I P + G T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 251 KHYLDQLNHILGILGSPSQEDLNCI 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE------VHKRPLKEEEIAAI 59
+L + +H N I R LR T + + + D++E + + L + I
Sbjct: 93 QILLRFRHENVIGIRDI-LRASTLEAMRDVYI--VQDLMETDLYKLLKSQQLSNDHICYF 149
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVG------- 112
+LRGL Y+HS +HRD+K N+L+ T +K+ DFG A I P + G
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T ++ APE++L + Y +D+WS+G
Sbjct: 210 TRWYRAPEIML--NSKGYTKSIDIWSVG 235
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+L+ T +K+
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKI 185
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 71/256 (27%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE++ +G G+FG V AR + AIKK+ + EK + IL E+ L L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQY 63
Query: 224 TIEYRGCYL-------------RDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNR 269
+ Y +L + T ++ MEYC G+ D+I H E + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---------HSENLNQQ 114
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
E++ LF +L L+Y+HS G IHRD+K NI +
Sbjct: 115 RD------EYWRLFR------------------QILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 330 ETGTVKLADFGSA-------------SIKCPAN-----SFVGTPYWMAPEVILAMDEGQY 371
E+ VK+ DFG A S P + S +GT ++A EV+ G Y
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHY 208
Query: 372 DGKVDVWSLGITCIEL 387
+ K+D++SLGI E+
Sbjct: 209 NEKIDMYSLGIIFFEM 224
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 7 LLRQLKHPNTIEYRGCYL-------------RDHTAWLVMEYCL-GSASDIIEVHKRPLK 52
LL L H + Y +L + T ++ MEYC G+ D+I +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 53 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----------- 101
+E + +L L+Y+HS G IHRD+K NI + E+ VK+ DFG A
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 102 --SIKCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
S P + S +GT ++A EV+ G Y+ K+D++SLGI
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGI 219
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 618 MEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 676
MEYC G+ D+I + +E + +L L+Y+HS G IHRD+K NI + E+
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR 153
Query: 677 TVKL 680
VK+
Sbjct: 154 NVKI 157
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E +++IG G+FG R S E+VA+K + G++ E ++ +EI R L+HPN
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDE---NVKREIINHRSLRHPN 75
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L +VMEY G + R+ F+E A F
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGE-----------------LFERICNAGRFSEDEARF 118
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ ++ G++Y H++ HRD+K N LL + +K+ DFG
Sbjct: 119 FFQ----------------QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 162
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
S+ + S VGTP ++APEV+L + +YDGKV DVWS G+T
Sbjct: 163 SKSSVLHSQPKSTVGTPAYIAPEVLL---KKEYDGKVADVWSCGVT 205
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 34/204 (16%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L +VMEY G E+ +R E+E +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGG-----ELFERICNAGRFSEDEARFFFQQL 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
+ G++Y H++ HRD+K N LL + +K+ DFG S+ + S VGTP ++A
Sbjct: 124 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 183
Query: 119 PEVILAMDEGQYDGKV-DVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGA 177
PEV+L + +YDGKV DVWS G+T + + + EDPE+ ++ R+ H
Sbjct: 184 PEVLL---KKEYDGKVADVWSCGVTLYVM----LVGAYPFEDPEEP-KNFRKTIHRILNV 235
Query: 178 VYY----------ARCLVSREIVA 191
Y R L+SR VA
Sbjct: 236 QYAIPDYVHISPECRHLISRIFVA 259
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
+VMEY G E+ +R E+E ++ G++Y H++ HRD+K N
Sbjct: 91 IVMEYASGG-----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 145
Query: 671 LLTETGTVKLDTPD 684
LL + +L D
Sbjct: 146 LLDGSPAPRLKICD 159
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ ++A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYQMAAGYPPFF 239
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFXEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 48/264 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLAFRHEN 84
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 85 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 118
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 119 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR 174
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Query: 397 MNAMSALYHI-------AQNDTPC 413
+ + L HI +Q D C
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNC 256
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 183 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 217
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKI 167
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A V++ VAIKK+S Q + L+EI+ L +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLAFRHEN 84
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 85 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 118
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 119 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Query: 344 IKCP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCI 257
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---- 106
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 107 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 183 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 217
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 167
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 58/320 (18%)
Query: 139 LGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYL 198
L TPG A D+ ++ R +G GSFG V + ++ + A+K +S
Sbjct: 32 LHATPGMFVQHSTAIFSDR------YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 85
Query: 199 GKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIE 258
+ +L+E++ L+QL HPN ++ + +LV E G
Sbjct: 86 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---------- 135
Query: 259 REFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIH 318
LF+ + ++ E + A I VL G+ Y+H +H
Sbjct: 136 -----------------------LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 172
Query: 319 RDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWMAPEVILAMDEGQ 370
RD+K N+LL ++ +++ DFG AS K +GT Y++APEV+ G
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPEVL----HGT 226
Query: 371 YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAE 430
YD K DVWS G+ L PP+ N L + + + W + +
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLI 285
Query: 431 RK----PPYFNMNAMSALYH 446
RK P ++A AL H
Sbjct: 286 RKMLTYVPSMRISARDALDH 305
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL+QL HPN ++ + +LV E Y G D I + ++ E + A I VL
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS 160
Query: 66 GLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWM 117
G+ Y+H +HRD+K N+LL ++ +++ DFG AS K +GT Y++
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYI 218
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APEV+ G YD K DVWS G+
Sbjct: 219 APEVL----HGTYDEKCDVWSTGV 238
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I + ++ E + A I VL G+ Y+H +HRD+K N+LL
Sbjct: 131 YTGGELFDEI-ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 58/320 (18%)
Query: 139 LGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYL 198
L TPG A D+ ++ R +G GSFG V + ++ + A+K +S
Sbjct: 33 LHATPGMFVQHSTAIFSDR------YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 86
Query: 199 GKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIE 258
+ +L+E++ L+QL HPN ++ + +LV E G
Sbjct: 87 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---------- 136
Query: 259 REFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIH 318
LF+ + ++ E + A I VL G+ Y+H +H
Sbjct: 137 -----------------------LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 173
Query: 319 RDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWMAPEVILAMDEGQ 370
RD+K N+LL ++ +++ DFG AS K +GT Y++APEV+ G
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPEVL----HGT 227
Query: 371 YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAE 430
YD K DVWS G+ L PP+ N L + + + W + +
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLI 286
Query: 431 RK----PPYFNMNAMSALYH 446
RK P ++A AL H
Sbjct: 287 RKMLTYVPSMRISARDALDH 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL+QL HPN ++ + +LV E Y G D I + ++ E + A I VL
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS 161
Query: 66 GLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWM 117
G+ Y+H +HRD+K N+LL ++ +++ DFG AS K +GT Y++
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYI 219
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APEV+ G YD K DVWS G+
Sbjct: 220 APEVL----HGTYDEKCDVWSTGV 239
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I + ++ E + A I VL G+ Y+H +HRD+K N+LL
Sbjct: 132 YTGGELFDEI-ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 169
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 115/287 (40%), Gaps = 51/287 (17%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GS+G V A +R A KK+ K E +EI ++ L HPN I
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIP---KYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ + +LVME C G LF VHK
Sbjct: 74 TFEDNTDIYLVMELCTGGE---------------------------------LFERVVHK 100
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTET--GTVKLADFGSASIKC 346
R +E + A I VL + Y H L HRD+K N L LT++ +KL DFG A+
Sbjct: 101 RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Query: 347 PANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
P VGTPY+++P+V+ EG Y + D WS G+ L PP+ +
Sbjct: 161 PGKMMRTKVGTPYYVSPQVL----EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
Query: 404 YHIAQNDTPCLQSSDWSVIKTISSTAER----KPPYFNMNAMSALYH 446
I + T DW + + + R K P + ++ AL H
Sbjct: 217 LKIREG-TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+++ L HPN I + + +LVME C G VHKR +E + A I VL
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTET--GTVKLADFGSASIKCPANSF---VGTPYWMAPE 120
+ Y H L HRD+K N L LT++ +KL DFG A+ P VGTPY+++P+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V+ EG Y + D WS G+
Sbjct: 179 VL----EGLYGPECDEWSAGV 195
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVME C G VHKR +E + A I VL + Y H L HRD+K N L
Sbjct: 83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT- 141
Query: 676 GTVKLDTPD 684
D+PD
Sbjct: 142 -----DSPD 145
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 58/320 (18%)
Query: 139 LGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYL 198
L TPG A D+ ++ R +G GSFG V + ++ + A+K +S
Sbjct: 9 LHATPGMFVQHSTAIFSDR------YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 62
Query: 199 GKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIE 258
+ +L+E++ L+QL HPN ++ + +LV E G
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---------- 112
Query: 259 REFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIH 318
LF+ + ++ E + A I VL G+ Y+H +H
Sbjct: 113 -----------------------LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 149
Query: 319 RDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWMAPEVILAMDEGQ 370
RD+K N+LL ++ +++ DFG AS K +GT Y++APEV+ G
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPEVL----HGT 203
Query: 371 YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAE 430
YD K DVWS G+ L PP+ N L + + + W + +
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLI 262
Query: 431 RK----PPYFNMNAMSALYH 446
RK P ++A AL H
Sbjct: 263 RKMLTYVPSMRISARDALDH 282
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL+QL HPN ++ + +LV E Y G D I + ++ E + A I VL
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS 137
Query: 66 GLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWM 117
G+ Y+H +HRD+K N+LL ++ +++ DFG AS K +GT Y++
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYI 195
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APEV+ G YD K DVWS G+
Sbjct: 196 APEVL----HGTYDEKCDVWSTGV 215
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I + ++ E + A I VL G+ Y+H +HRD+K N+LL
Sbjct: 108 YTGGELFDEI-ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 80
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 81 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 114
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 115 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 229 KHYLDQLNHILGILGSPSQEDLNCI 253
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 179 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 213
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 163
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 44/243 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSFG V + ++++ A+K ++ + + + IL+E+ L++L HPN ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFE 88
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
L D +++ Y +G E + G LF+ + +
Sbjct: 89 I-LEDSSSF----YIVG-------------ELYTGG---------------ELFDEIIKR 115
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI-- 344
+ E + A I V G+ Y+H +HRD+K NILL +K+ DFG ++
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 345 -KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
+GT Y++APEV+ G YD K DVWS G+ L PP++ N L
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 404 YHI 406
+
Sbjct: 232 KRV 234
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL++L HPN ++ + ++V E Y G D I + ++ E + A I V
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFS 132
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI---KCPANSFVGTPYWMAP 119
G+ Y+H +HRD+K NILL +K+ DFG ++ +GT Y++AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ G YD K DVWS G+
Sbjct: 193 EVL----RGTYDEKCDVWSAGV 210
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I + ++ E + A I V G+ Y+H +HRD+K NILL
Sbjct: 103 YTGGELFDEI-IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 87
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 88 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 121
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 122 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 236 KHYLDQLNHILGILGSPSQEDLNCI 260
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 186 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 220
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 170
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 88
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 89 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 122
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 123 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 178
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 237 KHYLDQLNHILGILGSPSQEDLNCI 261
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 127 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 187 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 221
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 127 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 171
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 79
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 80 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 113
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 114 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 169
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 228 KHYLDQLNHILGILGSPSQEDLNCI 252
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 118 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 178 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 212
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 118 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 162
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+++ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++APE+I++ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIIISKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+++ + G +++ DFG A +K GTP ++APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
++ Y+ VD W+LG+
Sbjct: 211 ISKG---YNKAVDWWALGV 226
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+++
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 KCQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP +APE+IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEALAPEIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP +APE+I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 115/287 (40%), Gaps = 51/287 (17%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GS+G V A +R A KK+ K E +EI ++ L HPN I
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIP---KYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ + +LVME C G LF VHK
Sbjct: 91 TFEDNTDIYLVMELCTGGE---------------------------------LFERVVHK 117
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTET--GTVKLADFGSASIKC 346
R +E + A I VL + Y H L HRD+K N L LT++ +KL DFG A+
Sbjct: 118 RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 347 PANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
P VGTPY+++P+V+ EG Y + D WS G+ L PP+ +
Sbjct: 178 PGKMMRTKVGTPYYVSPQVL----EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
Query: 404 YHIAQNDTPCLQSSDWSVIKTISSTAER----KPPYFNMNAMSALYH 446
I + T DW + + + R K P + ++ AL H
Sbjct: 234 LKIREG-TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+++ L HPN I + + +LVME C G VHKR +E + A I VL
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTET--GTVKLADFGSASIKCPANSF---VGTPYWMAPE 120
+ Y H L HRD+K N L LT++ +KL DFG A+ P VGTPY+++P+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V+ EG Y + D WS G+
Sbjct: 196 VL----EGLYGPECDEWSAGV 212
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVME C G VHKR +E + A I VL + Y H L HRD+K N L
Sbjct: 100 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT- 158
Query: 676 GTVKLDTPD 684
D+PD
Sbjct: 159 -----DSPD 162
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
F+ ++ +G GSFG V + S A M L KQ K I L E R L+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYA---MKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
P ++ + + ++VMEY G M + L+++ F+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE-----------------MFSHLRRIGRFSEPH 142
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
A F + ++ YLHSL I+RD+K N+L+ + G +++ DFG
Sbjct: 143 ARF----------------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 341 SAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
A +K GTP ++AP +IL+ Y+ VD W+LG+ E+A PP+F
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPAIILSKG---YNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGV 63
+L+ + P ++ + + ++VMEY G + H R + E + +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPEVI 122
+ YLHSL I+RD+K N+L+ + G +++ DFG A +K GTP ++AP +I
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAII 210
Query: 123 LAMDEGQYDGKVDVWSLGI 141
L+ Y+ VD W+LG+
Sbjct: 211 LSKG---YNKAVDWWALGV 226
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPL---KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G + H R + E + ++ YLHSL I+RD+K N+L+
Sbjct: 118 MVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 673 TETGTVKL 680
+ G +++
Sbjct: 175 DQQGYIQV 182
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 57/249 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE++ +G G+FG V AR + AIKK+ + EK + IL E+ L L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQY 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT-----E 278
+ Y W+ER V+ M ++ F E
Sbjct: 64 VVRYYAA-------------------------WLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 279 HFALFNFEVHKRPLKEE--EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L++ +H L ++ E + +L L+Y+HS G IHRD+K NI + E+ VK+
Sbjct: 99 NRTLYDL-IHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI 157
Query: 337 ADFGSA-------------SIKCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVW 378
DFG A S P + S +GT ++A EV+ G Y+ K+D++
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMY 215
Query: 379 SLGITCIEL 387
SLGI E+
Sbjct: 216 SLGIIFFEM 224
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 34/167 (20%)
Query: 7 LLRQLKHPNTIEYRGCYL-------------RDHTAWLVMEYCLG-SASDIIEVHKRPLK 52
LL L H + Y +L + T ++ MEYC + D+I +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 53 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----------- 101
+E + +L L+Y+HS G IHRD+K NI + E+ VK+ DFG A
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 102 --SIKCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
S P + S +GT ++A EV+ G Y+ K+D++SLGI
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGI 219
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 618 MEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 676
MEYC + D+I + +E + +L L+Y+HS G IHRD+K NI + E+
Sbjct: 94 MEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR 153
Query: 677 TVKL 680
VK+
Sbjct: 154 NVKI 157
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 41/250 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 80
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 81 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 114
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 115 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
Query: 397 MNAMSALYHI 406
+ + L HI
Sbjct: 229 KHYLDQLNHI 238
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 179 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 213
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 163
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAI+K+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Query: 344 IKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + +V T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS- 109
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 110 ------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+V T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E L +IG G++G V+ A+ + EIVA+K++ L + L+EI L++LKH N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ D LV E+C Q LK +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-------------------------QDLKKY------- 90
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
F+ L E + + +L+GL + HS +HRD+K N+L+ G +KLADFG A
Sbjct: 91 -FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
Query: 344 -----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
++C + V T ++ P+V+ Y +D+WS G ELA P F N
Sbjct: 150 AFGIPVRCYSAEVV-TLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAARPLFPGN 206
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LL++LKH N + D LV E+C + L E + + +L+G
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-----IKCPANSFVGTPYWMAPEV 121
L + HS +HRD+K N+L+ G +KLADFG A ++C + V T ++ P+V
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 122 ILAMDEGQYDGKVDVWSLG------------ITPGSLKDPEIAELF 155
+ Y +D+WS G + PG+ D ++ +F
Sbjct: 173 LFGAK--LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIF 216
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+C + L E + + +L+GL + HS +HRD+K N+L+
Sbjct: 78 LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN 137
Query: 676 GTVKL 680
G +KL
Sbjct: 138 GELKL 142
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ GK + E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR------ELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S++ + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ GK + E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR------ELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S++ + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 48/257 (18%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 107
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 108 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 156
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 157 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 198
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 199 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 256
Query: 390 RKPPYFNMNAMSALYHI 406
+P + + + L I
Sbjct: 257 GQPIFPGDSGVDQLVEI 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 104 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 163
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 164 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 224 RYYRAPELIFGATD--YTSSIDVWSAG 248
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 86
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 87 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 121 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Query: 344 IKCPANSFVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + G T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCI 259
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF 110
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 111 VG-------TPYWMAPEVILAMDEGQYDGKVDVWSLG 140
G T ++ APE++L + Y +D+WS+G
Sbjct: 185 TGFLXEXVATRWYRAPEIML--NSKGYTKSIDIWSVG 219
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ +L IG G++G V A +++ VAIKK+S Q + L+EI+ L + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHEN 87
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I +DII IE+ V + + ++ T+ + L
Sbjct: 88 II---------------------GINDIIRAPTIEQMKDVYIVQDLME-----TDLYKLL 121
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
+ L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A
Sbjct: 122 K----TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
Query: 344 IKCPANSFVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ P + G T ++ APE++L + Y +D+WS+G E+ +P +
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
Query: 397 MNAMSALYHI-------AQNDTPCL 414
+ + L HI +Q D C+
Sbjct: 236 KHYLDQLNHILGILGSPSQEDLNCI 260
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF 110
L + I +LRGL Y+HS +HRD+K N+LL T +K+ DFG A + P +
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 111 VG-------TPYWMAPEVILAMDEGQYDGKVDVWSLG 140
G T ++ APE++L + Y +D+WS+G
Sbjct: 186 TGFLXEXVATRWYRAPEIML--NSKGYTKSIDIWSVG 220
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L + I +LRGL Y+HS +HRD+K N+LL T +K+
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 170
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 103
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 104 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 152
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 153 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 194
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 252
Query: 390 RKP 392
+P
Sbjct: 253 GQP 255
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 220 RYYRAPELIFGATD--YTSSIDVWSAG 244
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 198
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 105
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 106 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 154
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 155 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 196
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 197 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 254
Query: 390 RKP 392
+P
Sbjct: 255 GQP 257
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 102 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 161
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 162 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 222 RYYRAPELIFGATD--YTSSIDVWSAG 246
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 200
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 97
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 98 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 146
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 147 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 188
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 189 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 246
Query: 390 RKP 392
+P
Sbjct: 247 GQP 249
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 94 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 153
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 154 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 214 RYYRAPELIFGATD--YTSSIDVWSAG 238
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 192
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 48/245 (19%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 20 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 72
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQ 271
R+L H N + R + Y G D + ++ + E + V +R +
Sbjct: 73 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 121
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TE 330
Q + L+ +++ R L Y+HS G HRD+K N+LL +
Sbjct: 122 QTLPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPD 163
Query: 331 TGTVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
T +KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 164 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAEL 221
Query: 388 AERKP 392
+P
Sbjct: 222 LLGQP 226
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 71 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 131 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 191 RYYRAPELIFGATD--YTSSIDVWSAG 215
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 169
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 48/245 (19%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 146
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQ 271
R+L H N + R + Y G D + ++ + E + V +R +
Sbjct: 147 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 195
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TE 330
Q + L+ +++ R L Y+HS G HRD+K N+LL +
Sbjct: 196 QTLPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPD 237
Query: 331 TGTVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
T +KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 238 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAEL 295
Query: 388 AERKP 392
+P
Sbjct: 296 LLGQP 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 145 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 205 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 265 RYYRAPELIFGATD--YTSSIDVWSAG 289
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P+++ + LR +G G++G+V A R+ VA+KK+S + +E+R L+
Sbjct: 25 EVPQRL-QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-RRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
LKH N I + S D EV+ + MG L +
Sbjct: 83 HLKHENVIGLLDVFT-----------PATSIEDFSEVYLV-----TTLMGADLNNI---- 122
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
V + L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 123 ---------VKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRIL 173
Query: 338 DFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
DFG A +V T ++ APE++L + Y+ VD+WS+G EL + K +
Sbjct: 174 DFGLARQADEEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
Query: 397 MNAMSALYHIAQ 408
+ + L I +
Sbjct: 232 SDYIDQLKRIME 243
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ LKH N I + + D + ++ +G+ + I V + L +E + +
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI-VKSQALSDEHVQFLVY 138
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTPYWMAPE 120
+LRGL Y+HS G IHRD+K N+ + E +++ DFG A +V T ++ APE
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 121 VILAMDEGQYDGKVDVWSLG 140
++L + Y+ VD+WS+G
Sbjct: 199 IML--NWMHYNQTVDIWSVG 216
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
V + L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 123 VKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D++ ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDVVYLNLVLD--YVPETVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S + + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL----RDHTAWL--VMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + + +L V++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 128/335 (38%), Gaps = 78/335 (23%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF-LRQLKHP 222
E + E+G G++G V R + S +I A+K++ +++ +L ++ R + P
Sbjct: 36 LEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR--ATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
T+ + G R+ W+ E ++ D I++
Sbjct: 94 FTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDK----------------------- 129
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGS 341
+ + E+ + I +++ L +LHS L IHRDVK N+L+ G VK DFG
Sbjct: 130 ------GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI 183
Query: 342 ASI---KCPANSFVGTPYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
+ + G + APE I +++ Y K D+WSLGIT IELA + PY
Sbjct: 184 SGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY--- 240
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQS 457
W L + + +P L +
Sbjct: 241 -------------------DSWG------------------TPFQQLKQVVEEPSPQLPA 263
Query: 458 SDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
+S F F S CL KN +RP+ L H T
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHK-RPLKEEEIAAICSGVLR 65
R + P T+ + G R+ W+ E S + + K + + E+ + I +++
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 66 GLNYLHS-LGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANSFVGTPYWMAPEV 121
L +LHS L IHRDVK N+L+ G VK DFG + + G + APE
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER 207
Query: 122 I-LAMDEGQYDGKVDVWSLGIT 142
I +++ Y K D+WSLGIT
Sbjct: 208 INPELNQKGYSVKSDIWSLGIT 229
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHS-LGRIHRDVKAGNILLTETGTVK 679
+ E+ + I +++ L +LHS L IHRDVK N+L+ G VK
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 177
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ GK + E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR------ELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPATVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S + + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKHPNT 224
L+ IG G+F V AR +++ + VA+K + + L +K + +E+R + L HPN
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIXKVLNHPNI 75
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
++ + T +LV EY G +F+
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGE---------------------------------VFD 102
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ V KE+E A ++ + Y H +HRD+KA N+LL +K+ADFG ++
Sbjct: 103 YLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNE 162
Query: 345 KCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMN 398
N +F G P + APE+ +YDG +VDVWSLG+ L P+ N
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLR 65
+ + L HPN ++ + T +LV EY G D + H R KE+E A ++
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGR-XKEKEARAKFRQIVS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPEVI 122
+ Y H +HRD+KA N+LL +K+ADFG ++ N +F G P + APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Query: 123 LAMDEGQYDG-KVDVWSLGI 141
+YDG +VDVWSLG+
Sbjct: 185 QGK---KYDGPEVDVWSLGV 201
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV EY G D + H R KE+E A ++ + Y H +HRD+KA N+LL
Sbjct: 90 LVXEYASGGEVFDYLVAHGR-XKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 675 TGTVKL 680
+K+
Sbjct: 149 DXNIKI 154
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 53/294 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIK--KMSYLGKQCAEKWADILKEIRFLRQLKH 221
F+ LR IG GS+ V R + I A+K K + W K + F + H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNH 65
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
P + C+ + + V+EY G D++ FH++
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGG--DLM--------FHMQ----------------- 98
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+R L EE + + LNYLH G I+RD+K N+LL G +KL D+G
Sbjct: 99 ------RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
Query: 342 ASIKC-PANS---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ F GTP ++APE++ D Y VD W+LG+ E+ + P F++
Sbjct: 153 CKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSP-FDI 208
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ +D P + D+ + + I R P ++ A S L D
Sbjct: 209 --------VGSSDNPDQNTEDY-LFQVILEKQIRIPRSLSVKAASVLKSFLNKD 253
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS 72
HP + C+ + + V+EY G +R L EE + + LNYLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANS---FVGTPYWMAPEVILAMDEG 128
G I+RD+K N+LL G +KL D+G P ++ F GTP ++APE++ D
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-- 182
Query: 129 QYDGKVDVWSLGI 141
Y VD W+LG+
Sbjct: 183 -YGFSVDWWALGV 194
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
V+EY G +R L EE + + LNYLH G I+RD+K N+LL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 676 GTVKL 680
G +KL
Sbjct: 143 GHIKL 147
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 82
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 83 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 131
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 132 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 173
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S++ + Y+ APE+I + Y +DVWS G EL
Sbjct: 174 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 231
Query: 390 RKP 392
+P
Sbjct: 232 GQP 234
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 79 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 138
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 139 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 199 RYYRAPELIFGATD--YTSSIDVWSAG 223
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 177
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E +++IG G+FG R S E+VA+K + G++ E ++ +EI R L+HPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDE---NVKREIINHRSLRHPN 76
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L +VMEY G + R+ F+E A F
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGE-----------------LFERICNAGRFSEDEARF 119
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ ++ G++Y H++ HRD+K N LL + +K+ FG
Sbjct: 120 FFQ----------------QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
S+ + S VGTP ++APEV+L + +YDGKV DVWS G+T
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLL---KKEYDGKVADVWSCGVT 206
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 34/204 (16%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L +VMEY G E+ +R E+E +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGG-----ELFERICNAGRFSEDEARFFFQQL 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
+ G++Y H++ HRD+K N LL + +K+ FG S+ + S VGTP ++A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 119 PEVILAMDEGQYDGKV-DVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGA 177
PEV+L + +YDGKV DVWS G+T + + + EDPE+ ++ R+ H
Sbjct: 185 PEVLL---KKEYDGKVADVWSCGVTLYVM----LVGAYPFEDPEEP-KNFRKTIHRILNV 236
Query: 178 VYY----------ARCLVSREIVA 191
Y R L+SR VA
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVA 260
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
+VMEY G E+ +R E+E ++ G++Y H++ HRD+K N
Sbjct: 92 IVMEYASGG-----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 671 LLTETGTVKL 680
LL + +L
Sbjct: 147 LLDGSPAPRL 156
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 53/294 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIK--KMSYLGKQCAEKWADILKEIRFLRQLKH 221
F+ LR IG GS+ V R + I A+K K + W K + F + H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNH 69
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
P + C+ + + V+EY G D++ FH++
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGG--DLM--------FHMQ----------------- 102
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+R L EE + + LNYLH G I+RD+K N+LL G +KL D+G
Sbjct: 103 ------RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Query: 342 ASIKC-PANS---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ F GTP ++APE++ D Y VD W+LG+ E+ + P F++
Sbjct: 157 CKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSP-FDI 212
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ +D P + D+ + + I R P ++ A S L D
Sbjct: 213 --------VGSSDNPDQNTEDY-LFQVILEKQIRIPRSLSVKAASVLKSFLNKD 257
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS 72
HP + C+ + + V+EY G +R L EE + + LNYLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANS---FVGTPYWMAPEVILAMDEG 128
G I+RD+K N+LL G +KL D+G P ++ F GTP ++APE++ D
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-- 186
Query: 129 QYDGKVDVWSLGI 141
Y VD W+LG+
Sbjct: 187 -YGFSVDWWALGV 198
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
V+EY G +R L EE + + LNYLH G I+RD+K N+LL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 676 GTVKL 680
G +KL
Sbjct: 147 GHIKL 151
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P+++ + LR +G G++G+V A R+ VA+KK+S + +E+R L+
Sbjct: 25 EVPQRL-QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-RRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
LKH N I + S D EV+ + MG L + KC
Sbjct: 83 HLKHENVIGLLDVFT-----------PATSIEDFSEVYLV-----TTLMGADLNNIVKC- 125
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 126 -------------QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 337 ADFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
DFG A +V T ++ APE++L + Y+ VD+WS+G EL + K +
Sbjct: 173 LDFGLARQADEEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALFP 230
Query: 396 NMNAMSALYHIAQ 408
+ + L I +
Sbjct: 231 GSDYIDQLKRIME 243
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ LKH N I + + D + ++ +G+ + I V + L +E + +
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI-VKCQALSDEHVQFLVY 138
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTPYWMAPE 120
+LRGL Y+HS G IHRD+K N+ + E +++ DFG A +V T ++ APE
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 121 VILAMDEGQYDGKVDVWSLG 140
++L + Y+ VD+WS+G
Sbjct: 199 IML--NWMHYNQTVDIWSVG 216
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 128 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 126/320 (39%), Gaps = 58/320 (18%)
Query: 139 LGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYL 198
L TPG A D+ ++ R +G GSFG V + ++ + A+K +S
Sbjct: 9 LHATPGXFVQHSTAIFSDR------YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 62
Query: 199 GKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIE 258
+ +L+E++ L+QL HPN + + +LV E G
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE---------- 112
Query: 259 REFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIH 318
LF+ + ++ E + A I VL G+ Y H +H
Sbjct: 113 -----------------------LFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVH 149
Query: 319 RDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWMAPEVILAMDEGQ 370
RD+K N+LL ++ +++ DFG AS K +GT Y++APEV+ G
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAYYIAPEVL----HGT 203
Query: 371 YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAE 430
YD K DVWS G+ L PP+ N L + + + W + +
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLI 262
Query: 431 RKP----PYFNMNAMSALYH 446
RK P ++A AL H
Sbjct: 263 RKXLTYVPSXRISARDALDH 282
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 16/144 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL+QL HPN + + +LV E Y G D I + ++ E + A I VL
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS 137
Query: 66 GLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYWM 117
G+ Y H +HRD+K N+LL ++ +++ DFG AS K +GT Y++
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAYYI 195
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APEV+ G YD K DVWS G+
Sbjct: 196 APEVL----HGTYDEKCDVWSTGV 215
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I + ++ E + A I VL G+ Y H +HRD+K N+LL
Sbjct: 108 YTGGELFDEI-ISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 44/243 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSFG V + ++++ A+K ++ + + + IL+E+ L++L HPN ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMK--- 85
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ E S+S +I E + G LF+ + +
Sbjct: 86 ----------LFEILEDSSS-----FYIVGELYTGG---------------ELFDEIIKR 115
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI-- 344
+ E + A I V G+ Y+H +HRD+K NILL +K+ DFG ++
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 345 -KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
+GT Y++APEV+ G YD K DVWS G+ L PP++ N L
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 404 YHI 406
+
Sbjct: 232 KRV 234
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL++L HPN ++ + ++V E Y G D I + ++ E + A I V
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFS 132
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI---KCPANSFVGTPYWMAP 119
G+ Y+H +HRD+K NILL +K+ DFG ++ +GT Y++AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ G YD K DVWS G+
Sbjct: 193 EVL----RGTYDEKCDVWSAGV 210
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+ ++ E + A I V G+ Y+H +HRD+K NILL
Sbjct: 113 IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 44/243 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSFG V + ++++ A+K ++ + + + IL+E+ L++L HPN ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMK--- 85
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ E S+S +I E + G LF+ + +
Sbjct: 86 ----------LFEILEDSSS-----FYIVGELYTGG---------------ELFDEIIKR 115
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI-- 344
+ E + A I V G+ Y+H +HRD+K NILL +K+ DFG ++
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 345 -KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
+GT Y++APEV+ G YD K DVWS G+ L PP++ N L
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 404 YHI 406
+
Sbjct: 232 KRV 234
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
LL++L HPN ++ + ++V E Y G D I + ++ E + A I V
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFS 132
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASI---KCPANSFVGTPYWMAP 119
G+ Y+H +HRD+K NILL +K+ DFG ++ +GT Y++AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ G YD K DVWS G+
Sbjct: 193 EVL----RGTYDEKCDVWSAGV 210
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+ ++ E + A I V G+ Y+H +HRD+K NILL
Sbjct: 113 IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 86/352 (24%)
Query: 143 PGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQC 202
PG+++ P + ED I++ +G G+F V A ++++VAIK ++ K
Sbjct: 2 PGAVEGPRWKQ---AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA--KKAL 56
Query: 203 AEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFH 262
K + EI L ++KHPN + Y +L+M+ G
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE-------------- 102
Query: 263 VEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVK 322
LF+ V K E + + + VL + YLH LG +HRD+K
Sbjct: 103 -------------------LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 323 AGNIL---LTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVD 376
N+L L E + ++DFG + ++ P + GTP ++APEV+ + Y VD
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVD 200
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS+G+ L PP+++ +ND + + + + E PY+
Sbjct: 201 CWSIGVIAYILLCGYPPFYD-----------ENDAKLFE-------QILKAEYEFDSPYW 242
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
+ D SD+ F+ + K+P R + + L H
Sbjct: 243 D---------------------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L ++KHPN + Y +L+M+ G V K E + + + VL
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 66 GLNYLHSLGRIHRDVKAGNIL---LTETGTVKLADFGSASIKCPANSF---VGTPYWMAP 119
+ YLH LG +HRD+K N+L L E + ++DFG + ++ P + GTP ++AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ + Y VD WS+G+
Sbjct: 188 EVLA---QKPYSKAVDCWSIGV 206
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
L+M+ G V K E + + + VL + YLH LG +HRD+K N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 53/294 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIK--KMSYLGKQCAEKWADILKEIRFLRQLKH 221
F+ LR IG GS+ V R + I A++ K + W K + F + H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV-FEQASNH 112
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
P + C+ + + V+EY G D++ FH++
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGG--DLM--------FHMQ----------------- 145
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+R L EE + + LNYLH G I+RD+K N+LL G +KL D+G
Sbjct: 146 ------RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Query: 342 ASIKC----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
++F GTP ++APE++ D Y VD W+LG+ E+ + P F++
Sbjct: 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGED---YGFSVDWWALGVLMFEMMAGRSP-FDI 255
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ +D P + D+ + + I R P ++ A S L D
Sbjct: 256 --------VGSSDNPDQNTEDY-LFQVILEKQIRIPRSLSVKAASVLKSFLNKD 300
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS 72
HP + C+ + + V+EY G +R L EE + + LNYLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGSASIKC----PANSFVGTPYWMAPEVILAMDEG 128
G I+RD+K N+LL G +KL D+G ++F GTP ++APE++ D
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-- 229
Query: 129 QYDGKVDVWSLGI 141
Y VD W+LG+
Sbjct: 230 -YGFSVDWWALGV 241
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
V+EY G +R L EE + + LNYLH G I+RD+K N+LL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 676 GTVKL 680
G +KL
Sbjct: 190 GHIKL 194
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 52/295 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ R +G GSFG V + ++ + A+K +S + +L+E++ L+QL HPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + +LV E G LF
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGE---------------------------------LF 120
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG 340
+ + ++ E + A I VL G+ Y+H +HRD+K N+LL ++ +++ DFG
Sbjct: 121 DEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 180
Query: 341 -----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
AS K +GT Y++APEV+ G YD K DVWS G+ L PP+
Sbjct: 181 LSTHFEASKKMKDK--IGTAYYIAPEVL----HGTYDEKCDVWSTGVILYILLSGCPPFN 234
Query: 396 NMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERK----PPYFNMNAMSALYH 446
N L + + + W + + RK P ++A AL H
Sbjct: 235 GANEYDILKKVEKGKY-TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
LL+QL HPN ++ + +LV E Y G D I KR E + A I VL
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVL 142
Query: 65 RGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG-----SASIKCPANSFVGTPYW 116
G+ Y+H +HRD+K N+LL ++ +++ DFG AS K +GT Y+
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+APEV+ G YD K DVWS G+
Sbjct: 201 IAPEVL----HGTYDEKCDVWSTGV 221
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 620 YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
Y G D I KR E + A I VL G+ Y+H +HRD+K N+LL
Sbjct: 114 YTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S++ + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S++ +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 41/249 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E + IG+G++G V AR ++ + VAIKK+ L+E++ L+ KH N
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHFKHDN 114
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I + LR + G + V ++ M + L Q+
Sbjct: 115 IIAIKDI-LRPTVPY-------GEFKSVYVV--------LDLMESDLHQI---------- 148
Query: 284 NFEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+H +PL E + +LRGL Y+HS IHRD+K N+L+ E +K+ DFG A
Sbjct: 149 ---IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 343 SIKC--PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
C PA +V T ++ APE++L++ E Y +D+WS+G E+ R+ +
Sbjct: 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEMLARRQLF 263
Query: 395 FNMNAMSAL 403
N + L
Sbjct: 264 PGKNYVHQL 272
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 7 LLRQLKHPNTIEYRGC------YLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
+L+ KH N I + Y + ++V++ II +PL E +
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTLEHVRYFL 164
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PA------NSFVG 112
+LRGL Y+HS IHRD+K N+L+ E +K+ DFG A C PA +V
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
T ++ APE++L++ E Y +D+WS+G G +
Sbjct: 225 TRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEM 256
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 634 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+PL E + +LRGL Y+HS IHRD+K N+L+ E +K+
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 199
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 54/290 (18%)
Query: 167 LRE-IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTI 225
+RE +G GSFG V A +++ VA+K +S + ++ + +EI +L+ L+HP+ I
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ +V+EY G LF++
Sbjct: 73 KLYDVITTPTDIVMVIEYAGGE----------------------------------LFDY 98
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
V K+ + E+E ++ + Y H +HRD+K N+LL + VK+ADFG ++I
Sbjct: 99 IVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
Query: 346 CPANSF---VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITC-IELAERKP------PY 394
N G+P + APEVI + Y G +VDVWS GI + L R P P
Sbjct: 159 TDGNFLKTSCGSPNYAAPEVI---NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215
Query: 395 FNMNAMSALYHIAQNDTPCLQSSDWSVI-----KTISSTAERKPPYFNMN 439
S +Y + +P QS +I + I+ R+ P+FN+N
Sbjct: 216 LFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S L+ L+HP+ I+ +V+EY G D I V K+ + E+E ++
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYI-VEKKRMTEDEGRRFFQQIIC 119
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI 122
+ Y H +HRD+K N+LL + VK+ADFG ++I N G+P + APEVI
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 123 LAMDEGQYDG-KVDVWSLGIT 142
+ Y G +VDVWS GI
Sbjct: 180 ---NGKLYAGPEVDVWSCGIV 197
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EY G D I V K+ + E+E ++ + Y H +HRD+K N+LL +
Sbjct: 86 MVIEYAGGELFDYI-VEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN 144
Query: 676 GTVKL 680
VK+
Sbjct: 145 LNVKI 149
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 41/252 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E + IG+G++G V AR ++ + VAIKK+ L+E++ L+ KH N
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHFKHDN 115
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I + LR + G + V ++ M + L Q+
Sbjct: 116 IIAIKDI-LRPTVPY-------GEFKSVYVV--------LDLMESDLHQI---------- 149
Query: 284 NFEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+H +PL E + +LRGL Y+HS IHRD+K N+L+ E +K+ DFG A
Sbjct: 150 ---IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 343 SIKC--PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
C PA +V T ++ APE++L++ E Y +D+WS+G E+ R+ +
Sbjct: 207 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEMLARRQLF 264
Query: 395 FNMNAMSALYHI 406
N + L I
Sbjct: 265 PGKNYVHQLQLI 276
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 7 LLRQLKHPNTIEYRGC------YLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
+L+ KH N I + Y + ++V++ II +PL E +
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTLEHVRYFL 165
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PA------NSFVG 112
+LRGL Y+HS IHRD+K N+L+ E +K+ DFG A C PA +V
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
T ++ APE++L++ E Y +D+WS+G G +
Sbjct: 226 TRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEM 257
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 634 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+PL E + +LRGL Y+HS IHRD+K N+L+ E +K+
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 48/257 (18%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 103
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 104 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 152
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 153 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 194
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 252
Query: 390 RKPPYFNMNAMSALYHI 406
+P + + + L I
Sbjct: 253 GQPIFPGDSGVDQLVEI 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 220 RYYRAPELIFGATD--YTSSIDVWSAG 244
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E L +IG G++G V+ A+ + EIVA+K++ L + L+EI L++LKH N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKN 62
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ D LV E+C Q LK +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-------------------------QDLKKY------- 90
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
F+ L E + + +L+GL + HS +HRD+K N+L+ G +KLA+FG A
Sbjct: 91 -FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
Query: 344 -----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
++C + V T ++ P+V+ Y +D+WS G ELA P F N
Sbjct: 150 AFGIPVRCYSAEVV-TLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGN 206
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LL++LKH N + D LV E+C + L E + + +L+G
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-----IKCPANSFVGTPYWMAPEV 121
L + HS +HRD+K N+L+ G +KLA+FG A ++C + V T ++ P+V
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 122 ILAMDEGQYDGKVDVWSLG------------ITPGSLKDPEIAELF 155
+ Y +D+WS G + PG+ D ++ +F
Sbjct: 173 LFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+C + L E + + +L+GL + HS +HRD+K N+L+
Sbjct: 78 LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN 137
Query: 676 GTVKL 680
G +KL
Sbjct: 138 GELKL 142
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P+++ + LR +G G++G+V A R+ VA+KK+S + +E+R L+
Sbjct: 17 EVPQRL-QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-RRTYRELRLLK 74
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
LKH N I + S D EV+ + MG L + KC
Sbjct: 75 HLKHENVIGLLDVFT-----------PATSIEDFSEVYLV-----TTLMGADLNNIVKC- 117
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 118 -------------QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164
Query: 337 ADFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
DFG A +V T ++ APE++L + Y+ VD+WS+G EL + K +
Sbjct: 165 LDFGLARQADEEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALFP 222
Query: 396 NMNAMSALYHIAQ 408
+ + L I +
Sbjct: 223 GSDYIDQLKRIME 235
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ LKH N I + + D + ++ +G+ + I V + L +E + +
Sbjct: 72 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI-VKCQALSDEHVQFLVY 130
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTPYWMAPE 120
+LRGL Y+HS G IHRD+K N+ + E +++ DFG A +V T ++ APE
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPE 190
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSL 146
++L + Y+ VD+WS+G L
Sbjct: 191 IML--NWMHYNQTVDIWSVGCIMAEL 214
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +E + + +LRGL Y+HS G IHRD+K N+ + E +++
Sbjct: 120 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKXVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME------------------- 122
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 123 -----------------LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDXTLKI 167
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 81
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 82 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 130
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 131 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 172
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 230
Query: 390 RKP 392
+P
Sbjct: 231 GQP 233
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 198 RYYRAPELIFGATD--YTSSIDVWSAG 222
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 176
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 46/226 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E +++IG G+FG R S E+VA+K + G++ E ++ +EI R L+HPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDE---NVKREIINHRSLRHPN 76
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ L +VMEY G + R+ F+E A F
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGE-----------------LFERICNAGRFSEDEARF 119
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG- 340
F+ ++ G++Y H++ HRD+K N LL + +K+ FG
Sbjct: 120 FFQ----------------QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGIT 383
S+ + VGTP ++APEV+L + +YDGKV DVWS G+T
Sbjct: 164 SKSSVLHSQPKDTVGTPAYIAPEVLL---KKEYDGKVADVWSCGVT 206
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 34/204 (16%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGV 63
R L+HPN + ++ L +VMEY G E+ +R E+E +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGG-----ELFERICNAGRFSEDEARFFFQQL 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILL--TETGTVKLADFG---SASIKCPANSFVGTPYWMA 118
+ G++Y H++ HRD+K N LL + +K+ FG S+ + VGTP ++A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIA 184
Query: 119 PEVILAMDEGQYDGKV-DVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGA 177
PEV+L + +YDGKV DVWS G+T + + + EDPE+ ++ R+ H
Sbjct: 185 PEVLL---KKEYDGKVADVWSCGVTLYVM----LVGAYPFEDPEEP-KNFRKTIHRILNV 236
Query: 178 VYY----------ARCLVSREIVA 191
Y R L+SR VA
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVA 260
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 616 LVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
+VMEY G E+ +R E+E ++ G++Y H++ HRD+K N
Sbjct: 92 IVMEYASGG-----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 671 LLTETGTVKL 680
LL + +L
Sbjct: 147 LLDGSPAPRL 156
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 139/343 (40%), Gaps = 64/343 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKXVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
A ++ L++S D +S L +PA R S L H
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQH 318
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDXTLKI 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 88
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 89 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 137
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 138 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 179
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 180 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 237
Query: 390 RKP 392
+P
Sbjct: 238 GQP 240
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 85 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 144
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 145 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 205 RYYRAPELIFGATD--YTSSIDVWSAG 229
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 183
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 55/265 (20%)
Query: 144 GSLKDPEIA----ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV---SREIVAIKKMS 196
GS+K+ I E +K DP + FE L+ +G GSFG V+ + + +R++ A+K +
Sbjct: 3 GSIKEIAITHHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL- 60
Query: 197 YLGKQCAEKWADILK---EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ K D ++ E L ++ HP ++ + + +L++++ G
Sbjct: 61 ---KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG------ 111
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+ RL + FTE E++ + + L++LHS
Sbjct: 112 -----------DLFTRLSKEVMFTE----------------EDVKFYLAELALALDHLHS 144
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEG 369
LG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+ +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV---NRR 201
Query: 370 QYDGKVDVWSLGITCIELAERKPPY 394
+ D WS G+ E+ P+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPF 226
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L ++ HP ++ + + +L++++ G + EE++ + +
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVI 122
L++LHSLG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 123 LAMDEGQYDGKVDVWSLGI 141
+ + D WS G+
Sbjct: 199 ---NRRGHTQSADWWSFGV 214
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
EE++ + + L++LHSLG I+RD+K NILL E G +KL
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 167
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 81
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 82 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 130
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 131 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 172
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 230
Query: 390 RKP 392
+P
Sbjct: 231 GQP 233
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 198 RYYRAPELIFGATD--YTSSIDVWSAG 222
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 176
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 55/265 (20%)
Query: 144 GSLKDPEIA----ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV---SREIVAIKKMS 196
GS+K+ I E +K DP + FE L+ +G GSFG V+ + + +R++ A+K +
Sbjct: 4 GSIKEIAITHHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL- 61
Query: 197 YLGKQCAEKWADILK---EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ K D ++ E L ++ HP ++ + + +L++++ G
Sbjct: 62 ---KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG------ 112
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+ RL + FTE E++ + + L++LHS
Sbjct: 113 -----------DLFTRLSKEVMFTE----------------EDVKFYLAELALALDHLHS 145
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEG 369
LG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+ +
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV---NRR 202
Query: 370 QYDGKVDVWSLGITCIELAERKPPY 394
+ D WS G+ E+ P+
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPF 227
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L ++ HP ++ + + +L++++ G + EE++ + +
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 139
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVI 122
L++LHSLG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 123 LAMDEGQYDGKVDVWSLGI 141
+ + D WS G+
Sbjct: 200 ---NRRGHTQSADWWSFGV 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
EE++ + + L++LHSLG I+RD+K NILL E G +KL
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 168
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 48/243 (19%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 77
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQQL 273
L H N + R + Y G D + ++ + E + V +R +Q
Sbjct: 78 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 126
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETG 332
+ L+ +++ R L Y+HS G HRD+K N+LL +T
Sbjct: 127 LPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPDTA 168
Query: 333 TVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 169 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLL 226
Query: 390 RKP 392
+P
Sbjct: 227 GQP 229
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 74 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 133
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 134 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 194 RYYRAPELIFGATD--YTSSIDVWSAG 218
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 172
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 55/265 (20%)
Query: 144 GSLKDPEIA----ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV---SREIVAIKKMS 196
GS+K+ I E +K DP + FE L+ +G GSFG V+ + + +R++ A+K +
Sbjct: 3 GSIKEIAITHHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL- 60
Query: 197 YLGKQCAEKWADILK---EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ K D ++ E L ++ HP ++ + + +L++++ G
Sbjct: 61 ---KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG------ 111
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+ RL + FTE E++ + + L++LHS
Sbjct: 112 -----------DLFTRLSKEVMFTE----------------EDVKFYLAELALALDHLHS 144
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEG 369
LG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+ +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV---NRR 201
Query: 370 QYDGKVDVWSLGITCIELAERKPPY 394
+ D WS G+ E+ P+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPF 226
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L ++ HP ++ + + +L++++ G + EE++ + +
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVI 122
L++LHSLG I+RD+K NILL E G +KL DFG S + A SF GT +MAPEV+
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 123 LAMDEGQYDGKVDVWSLGI 141
+ + D WS G+
Sbjct: 199 ---NRRGHTQSADWWSFGV 214
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
EE++ + + L++LHSLG I+RD+K NILL E G +KL
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 167
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 103/239 (43%), Gaps = 56/239 (23%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G FG A + RE + M L + E LKE++ +R L+HPN +++ G
Sbjct: 18 LGKGCFGQ---AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D + EY G + G+ + +++ +
Sbjct: 75 VLYKDKRLNFITEYIKGGT--------------LRGIIKSMDSQYPWSQRVSF------- 113
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------- 342
++IA+ G+ YLHS+ IHRD+ + N L+ E V +ADFG A
Sbjct: 114 ----AKDIAS-------GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162
Query: 343 -------SIKCPAN----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
S+K P + VG PYWMAPE+I + YD KVDV+S GI E+ R
Sbjct: 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI---NGRSYDEKVDVFSFGIVLCEIIGR 218
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 22/156 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVL 64
++R L+HPN +++ G +D + EY G + II+ + + +
Sbjct: 59 KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA--------------SIKCPAN-- 108
G+ YLHS+ IHRD+ + N L+ E V +ADFG A S+K P
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 109 --SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ VG PYWMAPE+I + YD KVDV+S GI
Sbjct: 179 RYTVVGNPYWMAPEMI---NGRSYDEKVDVFSFGIV 211
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 678
G+ II+ + + + G+ YLHS+ IHRD+ + N L+ E V
Sbjct: 92 GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV 147
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 67
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 68 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR---- 110
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 111 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S + + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 164 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 16 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 68
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R+L H N + R + Y G D + ++ + +V R+ +
Sbjct: 69 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR---- 111
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
++ K+ L + + R L Y+HS G HRD+K N+LL +T +K
Sbjct: 112 -------HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 164
Query: 336 LADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P S + + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 165 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 222
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 67 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 126
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 127 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 187 RYYRAPELIFGATD--YTSSIDVWSAG 211
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 165
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 139/343 (40%), Gaps = 64/343 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKXVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
A ++ L++S D +S L +PA R S L H
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQH 318
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDXTLKI 167
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 48/245 (19%)
Query: 158 EDPEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
+ P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +
Sbjct: 19 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIM 71
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWI-----EREFHVEGMGNRLQ 271
R+L H N + R + Y G D + ++ + E + V +R +
Sbjct: 72 RKLDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 120
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TE 330
Q + L+ +++ R L Y+HS G HRD+K N+LL +
Sbjct: 121 QTLPVI-YVKLYMYQL-----------------FRSLAYIHSFGICHRDIKPQNLLLDPD 162
Query: 331 TGTVKLADFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
T +KL DFGSA P S + + Y+ APE+I + Y +DVWS G EL
Sbjct: 163 TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAEL 220
Query: 388 AERKP 392
+P
Sbjct: 221 LLGQP 225
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 70 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 129
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 130 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 190 RYYRAPELIFGATD--YTSSIDVWSAG 214
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 168
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 38/238 (15%)
Query: 160 PEKI-FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
P+++ + D + IG+GSFG VY A+ S E+VAIKK+ +++ + +E++ +R+
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKN--RELQIMRK 69
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
L H N + R + Y G D + ++ + +V R+ +
Sbjct: 70 LDHCNIVRLRYFF-----------YSSGEKKDEVYLNLVLD--YVPETVYRVAR------ 110
Query: 279 HFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLA 337
++ K+ L + + R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 111 -----HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 338 DFGSASIKC---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
DFGSA P S + + Y+ APE+I + Y +DVWS G EL +P
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD--YTSSIDVWSAGCVLAELLLGQP 221
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 7 LLRQLKHPNTIEYRGCYL-----RDHTAW-LVMEYCLGSASDIIEVHKRPLKEEEIAAI- 59
++R+L H N + R + +D LV++Y + + + R + + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 60 --CSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKC---PANSFVGT 113
+ R L Y+HS G HRD+K N+LL +T +KL DFGSA P S + +
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLG 140
Y+ APE+I + Y +DVWS G
Sbjct: 186 RYYRAPELIFGATD--YTSSIDVWSAG 210
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
+ R L Y+HS G HRD+K N+LL +T +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 50/250 (20%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIK---KMSYLGKQCAEKWADILKEIR 214
ED +KIFE +G G+F V A + ++ A+K K + GK+ + I EI
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS-----IENEIA 72
Query: 215 FLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
LR++KH N + Y + +LVM+ G
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE-------------------------- 106
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TET 331
LF+ V K E++ + + VL + YLH +G +HRD+K N+L E
Sbjct: 107 -------LFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEE 159
Query: 332 GTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+ ++DFG + ++ + + GTP ++APEV+ + Y VD WS+G+ L
Sbjct: 160 SKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILL 216
Query: 389 ERKPPYFNMN 398
PP+++ N
Sbjct: 217 CGYPPFYDEN 226
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++LR++KH N + Y + +LVM+ G V K E++ + + VL
Sbjct: 72 AVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 66 GLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSASIKCPAN---SFVGTPYWMAP 119
+ YLH +G +HRD+K N+L E + ++DFG + ++ + + GTP ++AP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ + Y VD WS+G+
Sbjct: 192 EVLA---QKPYSKAVDCWSIGV 210
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
LVM+ G V K E++ + + VL + YLH +G +HRD+K N+L
Sbjct: 97 LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++ +G GSFG V A + + VA+K ++ ++ I +EI +LR L+HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I+ L D + S +II V +E GN L F
Sbjct: 66 IIK-----LYD---------VIKSKDEIIMV--------IEYAGNEL------------F 91
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ V + + E+E ++ + Y H +HRD+K N+LL E VK+ADFG ++
Sbjct: 92 DYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 151
Query: 344 IKCPANSF---VGTPYWMAPEVILAMDEGQ-YDG-KVDVWSLGITCIELAERKPPY 394
I N G+P + APEVI G+ Y G +VDVWS G+ + R+ P+
Sbjct: 152 IMTDGNFLKTSCGSPNYAAPEVI----SGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S LR L+HP+ I+ +V+EY D I V + + E+E ++
Sbjct: 56 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIIS 114
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI 122
+ Y H +HRD+K N+LL E VK+ADFG ++I N G+P + APEVI
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 123 LAMDEGQ-YDG-KVDVWSLGI 141
G+ Y G +VDVWS G+
Sbjct: 175 ----SGKLYAGPEVDVWSCGV 191
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EY D I V + + E+E ++ + Y H +HRD+K N+LL E
Sbjct: 81 MVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 139
Query: 676 GTVKL 680
VK+
Sbjct: 140 LNVKI 144
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 85/338 (25%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAE-KWADILKEIRFL 216
ED I++ +G G+F V A ++++VAIK ++ K+ E K + EI L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA---KEALEGKEGSMENEIAVL 70
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
++KHPN + Y +L+M+ G
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---------------------------- 102
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL---LTETGT 333
LF+ V K E + + + VL + YLH LG +HRD+K N+L L E
Sbjct: 103 -----LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 334 VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+ ++DFG + ++ P + GTP ++APEV+ + Y VD WS+G+ L
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCG 214
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQN 450
PP+++ +ND + + + + E PY++
Sbjct: 215 YPPFYD-----------ENDAKLFE-------QILKAEYEFDSPYWD------------- 243
Query: 451 DTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
D SD+ F+ + K+P R + + L H
Sbjct: 244 --------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L ++KHPN + Y +L+M+ G V K E + + + VL
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 66 GLNYLHSLGRIHRDVKAGNIL---LTETGTVKLADFGSASIKCPANSF---VGTPYWMAP 119
+ YLH LG +HRD+K N+L L E + ++DFG + ++ P + GTP ++AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ + Y VD WS+G+
Sbjct: 188 EVLA---QKPYSKAVDCWSIGV 206
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
V K E + + + VL + YLH LG +HRD+K N+L
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++ +G GSFG V A + + VA+K ++ ++ I +EI +LR L+HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I+ L D + S +II V +E GN L F
Sbjct: 76 IIK-----LYD---------VIKSKDEIIMV--------IEYAGNEL------------F 101
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ V + + E+E ++ + Y H +HRD+K N+LL E VK+ADFG ++
Sbjct: 102 DYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 161
Query: 344 IKCPANSF---VGTPYWMAPEVILAMDEGQ-YDG-KVDVWSLGITCIELAERKPPY 394
I N G+P + APEVI G+ Y G +VDVWS G+ + R+ P+
Sbjct: 162 IMTDGNFLKTSCGSPNYAAPEVI----SGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S LR L+HP+ I+ +V+EY D I V + + E+E ++
Sbjct: 66 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIIS 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI 122
+ Y H +HRD+K N+LL E VK+ADFG ++I N G+P + APEVI
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 123 LAMDEGQ-YDG-KVDVWSLGI 141
G+ Y G +VDVWS G+
Sbjct: 185 ----SGKLYAGPEVDVWSCGV 201
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EY D I V + + E+E ++ + Y H +HRD+K N+LL E
Sbjct: 91 MVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 149
Query: 676 GTVKL 680
VK+
Sbjct: 150 LNVKI 154
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 33/236 (13%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+++ IG G FG V+ A+ + + I+++ Y ++ +E++ L +L H N
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-------REVKALAKLDHVN 66
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ-QLKC------F 276
+ Y GC W +Y ++ D +E ++ E N + + KC F
Sbjct: 67 IVHYNGC-------WDGFDYDPETSDDSLE----SSDYDPENSKNSSRSKTKCLFIQMEF 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAI--CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
+ L + +R K +++ A+ + +G++Y+HS IHRD+K NI L +T V
Sbjct: 116 CDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQV 175
Query: 335 KLADFG-SASIKCPANSF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K+ DFG S+K GT +M+PE I + D G+ +VD+++LG+ EL
Sbjct: 176 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAEL 228
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 27/153 (17%)
Query: 30 WLVMEYC-LGSASDIIEVHKRPLKEEEIAAI--CSGVLRGLNYLHSLGRIHRDVKAGNIL 86
++ ME+C G+ IE +R K +++ A+ + +G++Y+HS IHRD+K NI
Sbjct: 110 FIQMEFCDKGTLEQWIE-KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 87 LTETGTVKLADFG-SASIKCPANSF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
L +T VK+ DFG S+K GT +M+PE I + D G+ +VD+++LG+
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLIL 225
Query: 144 G-----------------SLKDPEIAELFDKED 159
L+D I+++FDK++
Sbjct: 226 AELLHVCDTAFETSKFFTDLRDGIISDIFDKKE 258
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 618 MEYC-LGSASDIIEVHKRPLKEEEIAAI--CSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
ME+C G+ IE +R K +++ A+ + +G++Y+HS IHRD+K NI L +
Sbjct: 113 MEFCDKGTLEQWIE-KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 171
Query: 675 TGTVKL 680
T VK+
Sbjct: 172 TKQVKI 177
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++ +G GSFG V A + + VA+K ++ ++ I +EI +LR L+HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I+ L D + S +II V +E GN L F
Sbjct: 75 IIK-----LYD---------VIKSKDEIIMV--------IEYAGNEL------------F 100
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ V + + E+E ++ + Y H +HRD+K N+LL E VK+ADFG ++
Sbjct: 101 DYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 160
Query: 344 IKCPANSF---VGTPYWMAPEVILAMDEGQ-YDG-KVDVWSLGITCIELAERKPPY 394
I N G+P + APEVI G+ Y G +VDVWS G+ + R+ P+
Sbjct: 161 IMTDGNFLKTSCGSPNYAAPEVI----SGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S LR L+HP+ I+ +V+EY D I V + + E+E ++
Sbjct: 65 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIIS 123
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI 122
+ Y H +HRD+K N+LL E VK+ADFG ++I N G+P + APEVI
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 123 LAMDEGQ-YDG-KVDVWSLGI 141
G+ Y G +VDVWS G+
Sbjct: 184 ----SGKLYAGPEVDVWSCGV 200
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EY D I V + + E+E ++ + Y H +HRD+K N+LL E
Sbjct: 90 MVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 148
Query: 676 GTVKL 680
VK+
Sbjct: 149 LNVKI 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++ +G GSFG V A + + VA+K ++ ++ I +EI +LR L+HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I+ L D + S +II V +E GN L F
Sbjct: 70 IIK-----LYD---------VIKSKDEIIMV--------IEYAGNEL------------F 95
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ V + + E+E ++ + Y H +HRD+K N+LL E VK+ADFG ++
Sbjct: 96 DYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 155
Query: 344 IKCPANSF---VGTPYWMAPEVILAMDEGQ-YDG-KVDVWSLGITCIELAERKPPY 394
I N G+P + APEVI G+ Y G +VDVWS G+ + R+ P+
Sbjct: 156 IMTDGNFLKTSCGSPNYAAPEVI----SGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S LR L+HP+ I+ +V+EY D I V + + E+E ++
Sbjct: 60 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIIS 118
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI 122
+ Y H +HRD+K N+LL E VK+ADFG ++I N G+P + APEVI
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 123 LAMDEGQ-YDG-KVDVWSLGI 141
G+ Y G +VDVWS G+
Sbjct: 179 ----SGKLYAGPEVDVWSCGV 195
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EY D I V + + E+E ++ + Y H +HRD+K N+LL E
Sbjct: 85 MVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 143
Query: 676 GTVKL 680
VK+
Sbjct: 144 LNVKI 148
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 85/338 (25%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAE-KWADILKEIRFL 216
ED I++ +G G+F V A ++++VAIK + K+ E K + EI L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIK---CIAKEALEGKEGSMENEIAVL 70
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
++KHPN + Y +L+M+ G
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---------------------------- 102
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL---LTETGT 333
LF+ V K E + + + VL + YLH LG +HRD+K N+L L E
Sbjct: 103 -----LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 334 VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+ ++DFG + ++ P + GTP ++APEV+ + Y VD WS+G+ L
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCG 214
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQN 450
PP+++ +ND + + + + E PY++
Sbjct: 215 YPPFYD-----------ENDAKLFE-------QILKAEYEFDSPYWD------------- 243
Query: 451 DTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
D SD+ F+ + K+P R + + L H
Sbjct: 244 --------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L ++KHPN + Y +L+M+ G V K E + + + VL
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 66 GLNYLHSLGRIHRDVKAGNIL---LTETGTVKLADFGSASIKCPANSF---VGTPYWMAP 119
+ YLH LG +HRD+K N+L L E + ++DFG + ++ P + GTP ++AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ + Y VD WS+G+
Sbjct: 188 EVLA---QKPYSKAVDCWSIGV 206
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN-----------ILLTETGTVK 679
V K E + + + VL + YLH LG +HRD+K N I++++ G K
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 680 LDTP 683
++ P
Sbjct: 168 MEDP 171
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 140/338 (41%), Gaps = 85/338 (25%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAE-KWADILKEIRFL 216
ED I++ +G G+F V A ++++VAIK + K+ E K + EI L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIK---CIAKEALEGKEGSMENEIAVL 70
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
++KHPN + Y +L+M+ L S ++ + +E+ F+ E +RL
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQ--LVSGGELFD-RIVEKGFYTERDASRL------ 121
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL---LTETGT 333
+F VL + YLH LG +HRD+K N+L L E
Sbjct: 122 -----IFQ-------------------VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 334 VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+ ++DFG + ++ P + GTP ++APEV+ + Y VD WS+G+ L
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCG 214
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQN 450
PP+++ +ND + + + + E PY++
Sbjct: 215 YPPFYD-----------ENDAKLFE-------QILKAEYEFDSPYWD------------- 243
Query: 451 DTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
D SD+ F+ + K+P R + + L H
Sbjct: 244 --------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++L ++KHPN + Y +L+M+ G V K E + + + VL
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 66 GLNYLHSLGRIHRDVKAGNIL---LTETGTVKLADFGSASIKCPANSF---VGTPYWMAP 119
+ YLH LG +HRD+K N+L L E + ++DFG + ++ P + GTP ++AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
EV+ + Y VD WS+G+
Sbjct: 188 EVLA---QKPYSKAVDCWSIGV 206
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN-----------ILLTETGTVK 679
V K E + + + VL + YLH LG +HRD+K N I++++ G K
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 680 LDTP 683
++ P
Sbjct: 168 MEDP 171
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 74
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME------------------- 115
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 116 -----------------LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 158
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 159 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 213
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 272
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 273 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLL 125
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA--RTAGTSFMMTPYVVTRY 183
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 184 YRAPEVILGMG---YKENVDIWSVGCIMGEM 211
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGI 140
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 141 IHRDLKPSNIVVKSDXTLKI 160
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 45/246 (18%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILK---E 212
+K DP FE L+ +G GSFG V+ R + + + M L K+ K D ++ E
Sbjct: 23 EKADPSH-FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-KKATLKVRDRVRTKME 80
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
L + HP ++ + + +L++++ G + RL +
Sbjct: 81 RDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGG-----------------DLFTRLSK 123
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
FT EE++ + + GL++LHSLG I+RD+K NILL E G
Sbjct: 124 EVMFT----------------EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEG 167
Query: 333 TVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+KL DFG + + A SF GT +MAPEV+ + + D WS G+ E+
Sbjct: 168 HIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV---NRQGHSHSADWWSYGVLMFEML 224
Query: 389 ERKPPY 394
P+
Sbjct: 225 TGSLPF 230
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L + HP ++ + + +L++++ G + EE++ + + G
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPEVI 122
L++LHSLG I+RD+K NILL E G +KL DFG + + A SF GT +MAPEV+
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 123 LAMDEGQYDGKVDVWSLGI 141
+ + D WS G+
Sbjct: 203 ---NRQGHSHSADWWSYGV 218
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
EE++ + + GL++LHSLG I+RD+K NILL E G +KL
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKL 171
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME------------------- 122
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 123 -----------------LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDXTLKI 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 82
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 137
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 138 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 167 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 221
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 222 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 280
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 281 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 191
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 192 YRAPEVILGMG---YKENVDIWSVGCIMGEM 219
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 149 IHRDLKPSNIVVKSDCTLKI 168
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 59
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 60 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 103 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 146
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S +F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 147 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 203
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 204 GRLPFYNQD 212
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 59 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 118
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S +F GTP ++APE
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 179 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 218
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 85 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 144
Query: 676 GTVKL 680
G +K+
Sbjct: 145 GHIKI 149
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 56
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 99
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 100 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S +F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 201 GRLPFYNQD 209
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S +F GTP ++APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 176 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 215
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 676 GTVKL 680
G +K+
Sbjct: 142 GHIKI 146
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 56
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 99
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 100 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S +F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 201 GRLPFYNQD 209
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S +F GTP ++APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 176 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 215
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 676 GTVKL 680
G +K+
Sbjct: 142 GHIKI 146
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 33/247 (13%)
Query: 163 IFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
++ DL+ +G G++GAV A + VAIKK+ Y Q +E+R L+ ++H
Sbjct: 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N I + D T L +D V + MG L +L
Sbjct: 85 NVIGLLDVFTPDET--------LDDFTDFYLV--------MPFMGTDLGKL--------- 119
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ L E+ I + +L+GL Y+H+ G IHRD+K GN+ + E +K+ DFG A
Sbjct: 120 ----MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
V T ++ APEVIL + +Y VD+WS+G E+ K + + +
Sbjct: 176 RQADSEMXGXVVTRWYRAPEVIL--NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 402 ALYHIAQ 408
L I +
Sbjct: 234 QLKEIMK 240
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTA------WLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
LL+ ++H N I + D T +LVM + +G+ + H++ L E+ I +
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF-MGTDLGKLMKHEK-LGEDRIQFLV 134
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTPYWMAP 119
+L+GL Y+H+ G IHRD+K GN+ + E +K+ DFG A V T ++ AP
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAP 194
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
EVIL + +Y VD+WS+G
Sbjct: 195 EVIL--NWMRYTQTVDIWSVG 213
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVM + +G+ + H++ L E+ I + +L+GL Y+H+ G IHRD+K GN+ + E
Sbjct: 107 LVMPF-MGTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED 164
Query: 676 GTVKL 680
+K+
Sbjct: 165 CELKI 169
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 80
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 135
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 136 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 164
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 165 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 219
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 220 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 278
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 279 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 321
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 75 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 132 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 189
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 190 YRAPEVILGMG---YKENVDIWSVGCIMGEM 217
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 90 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 146
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 147 IHRDLKPSNIVVKSDCTLKI 166
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ + E
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 58
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H ER
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-AER---- 113
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
+H L + S + +G+ YL + IHRD+
Sbjct: 114 -------------IDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 145
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 146 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 199
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 200 ASDVWSFGVVLYEL 213
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ H + ++ S +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 185 -FWYAPE---SLTESKFSVASDVWSFGVV 209
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ H + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 92 KLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 674 ETGTVKL 680
VK+
Sbjct: 152 NENRVKI 158
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ + E
Sbjct: 30 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 86
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CYLRDHTAW-LVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-------- 138
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
K +H L + S + +G+ YL + IHRD+
Sbjct: 139 ----------KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 173
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 174 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 227
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 228 ASDVWSFGVVLYEL 241
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 212
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 213 -FWYAPE---SLTESKFSVASDVWSFGVV 237
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 179
Query: 674 ETGTVKL 680
VK+
Sbjct: 180 NENRVKI 186
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 75
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 130
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 131 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 160 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 214
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 215 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 273
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 274 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 126
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 184
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 185 YRAPEVILGMG---YKENVDIWSVGCIMGEM 212
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 142 IHRDLKPSNIVVKSDCTLKI 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ + E
Sbjct: 6 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 62
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-------- 114
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
K +H L + S + +G+ YL + IHRD+
Sbjct: 115 ----------KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 149
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 150 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 203
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 204 ASDVWSFGVVLYEL 217
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 188
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 189 -FWYAPE---SLTESKFSVASDVWSFGVV 213
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 96 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 155
Query: 674 ETGTVKL 680
VK+
Sbjct: 156 NENRVKI 162
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 279
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 280 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 82
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 137
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 138 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 167 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 221
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 222 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 280
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 281 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 191
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 192 YRAPEVILGMG---YKENVDIWSVGCIMGEM 219
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 149 IHRDLKPSNIVVKSDCTLKI 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ + E
Sbjct: 4 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 60
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-------- 112
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
K +H L + S + +G+ YL + IHRD+
Sbjct: 113 ----------KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 147
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 148 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 201
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 202 ASDVWSFGVVLYEL 215
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 186
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 187 -FWYAPE---SLTESKFSVASDVWSFGVV 211
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 94 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 153
Query: 674 ETGTVKL 680
VK+
Sbjct: 154 NENRVKI 160
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
LF++ K L E+E +I +L +++LH+ +HRD+K NILL + ++L+DFG
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 342 ASIKCPANS---FVGTPYWMAPEVI-LAMDEGQ--YDGKVDVWSLGITCIELAERKPPYF 395
+ P GTP ++APE++ +MDE Y +VD+W+ G+ L PP++
Sbjct: 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306
Query: 396 NMNAMSALYHIAQNDTPCLQSSDW----SVIKTISSTAERKPPYFNMNAMSALYH 446
+ + L I + S +W S +K + S + P + A AL H
Sbjct: 307 HRRQILMLRMIMEGQYQ-FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHKRPLKEEEIAAICS 61
+ +LRQ+ HP+ I Y + ++++ + + L ++ + K L E+E +I
Sbjct: 150 THILRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR 207
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS---FVGTPYWMA 118
+L +++LH+ +HRD+K NILL + ++L+DFG + P GTP ++A
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 119 PEVI-LAMDEGQ--YDGKVDVWSLGI 141
PE++ +MDE Y +VD+W+ G+
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGV 293
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
K L E+E +I +L +++LH+ +HRD+K NILL + ++L
Sbjct: 194 KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE++ +G G+FG V AR + AIKK+ + EK + IL E+ L L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLNHQY 63
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ Y + AWL + + + + +I+ E+ C E+
Sbjct: 64 VVRY-------YAAWLERRNFVKPXTAVKKKSTLFIQXEY-------------C--ENRT 101
Query: 282 LFNFEVHKRPLKEE--EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
L++ +H L ++ E + +L L+Y+HS G IHR++K NI + E+ VK+ DF
Sbjct: 102 LYDL-IHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDF 160
Query: 340 GSA-------------SIKCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 381
G A S P + S +GT ++A EV+ G Y+ K+D +SLG
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGT--GHYNEKIDXYSLG 218
Query: 382 ITCIE 386
I E
Sbjct: 219 IIFFE 223
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 34/167 (20%)
Query: 7 LLRQLKHPNTIEYRGCYL-------------RDHTAWLVMEYCLG-SASDIIEVHKRPLK 52
LL L H + Y +L + T ++ EYC + D+I +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 53 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----------- 101
+E + +L L+Y+HS G IHR++K NI + E+ VK+ DFG A
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 102 --SIKCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
S P + S +GT ++A EV+ G Y+ K+D +SLGI
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGT--GHYNEKIDXYSLGI 219
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 619 EYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
EYC + D+I + +E + +L L+Y+HS G IHR++K NI + E+
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRN 154
Query: 678 VKL 680
VK+
Sbjct: 155 VKI 157
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ + E
Sbjct: 3 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 59
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-------- 111
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
K +H L + S + +G+ YL + IHRD+
Sbjct: 112 ----------KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 146
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 147 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 200
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 201 ASDVWSFGVVLYEL 214
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 185
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 186 -FWYAPE---SLTESKFSVASDVWSFGVV 210
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 93 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 152
Query: 674 ETGTVKL 680
VK+
Sbjct: 153 NENRVKI 159
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 74
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 129
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 130 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 158
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 159 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 213
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 272
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 273 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 125
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 126 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 183
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 184 YRAPEVILGMG---YKENVDIWSVGCIMGEM 211
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 141 IHRDLKPSNIVVKSDCTLKI 160
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR-QLKHP 222
FE + +G GSFG V+ A + + AIK + + + E R L +HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ + VMEY G D++ +H++
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGG--DLM--------YHIQS----------------- 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
HK L A + ++ GL +LHS G ++RD+K NILL + G +K+ADFG
Sbjct: 113 ----CHKFDLSRATFYA--AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 166
Query: 343 SIK----CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
N F GTP ++APE++L +Y+ VD WS G+ E+ + P+ +
Sbjct: 167 KENMLGDAKTNEFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
Query: 399 AMSALYHIAQNDTP 412
L+H + D P
Sbjct: 224 E-EELFHSIRMDNP 236
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
+HP + + VMEY G I HK L A + ++ GL +
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQF 134
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK----CPANSFVGTPYWMAPEVILAM 125
LHS G ++RD+K NILL + G +K+ADFG N F GTP ++APE++L
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 126 DEGQYDGKVDVWSLGITPGSLKDPEIAEL-FDKEDPEKIFEDLR 168
+Y+ VD WS G+ L + I + F +D E++F +R
Sbjct: 195 ---KYNHSVDWWSFGVL---LYEMLIGQSPFHGQDEEELFHSIR 232
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
VMEY G I HK L A + ++ GL +LHS G ++RD+K NILL
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 154 KDGHIKI 160
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 63/257 (24%)
Query: 152 AELFDKEDP----EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCA 203
A F+ DP E+ + L+++G G+FG+V R + E+VA+KK+ +
Sbjct: 2 AMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STE 58
Query: 204 EKWADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIERE 260
E D +EI L+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 59 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----- 113
Query: 261 FHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRD 320
K +H L + S + +G+ YL + IHRD
Sbjct: 114 -------------KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRD 145
Query: 321 VKAGNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQ 370
+ NIL+ VK+ DFG +K P S + +W APE ++ E +
Sbjct: 146 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESK 199
Query: 371 YDGKVDVWSLGITCIEL 387
+ DVWS G+ EL
Sbjct: 200 FSVASDVWSFGVVLYEL 216
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 187
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 188 -FWYAPE---SLTESKFSVASDVWSFGVV 212
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 95 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 154
Query: 674 ETGTVKL 680
VK+
Sbjct: 155 NENRVKI 161
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 75
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 130
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 131 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 160 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 214
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 215 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 273
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 274 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 126
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 184
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 185 YRAPEVILGMG---YKENVDIWSVGCIMGEM 212
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 142 IHRDLKPSNIVVKSDCTLKI 161
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 55/238 (23%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME------------------- 122
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 123 -----------------LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G+ E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGVIMGEM 218
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + + ++VME + S +I++ L E ++ +
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G+ G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGVIMGEM 218
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDATLKI 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 64/347 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 119
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 174
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 175 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 204 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 258
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 259 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 317
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT 492
A ++ L++S D +S L +PA R S L H +
Sbjct: 318 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYIN 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 170
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 228
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 229 YRAPEVILGMG---YKENVDIWSVGCIMGEM 256
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 186 IHRDLKPSNIVVKSDCTLKI 205
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 140/346 (40%), Gaps = 64/346 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A V VAIKK+S Q K A +E+ ++ +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 119
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I++ E E M L Q+
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQML 174
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 175 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 204 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVR 258
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSAL---Y 445
K + + + I Q TPC + + T+ + E +P Y +
Sbjct: 259 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 317
Query: 446 HIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV 491
A ++ L++S D +S L +PA R S L H +
Sbjct: 318 FPADSEHNKLKASQARD----LLSKMLVIDPAKRISVDDALQHPYI 359
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + T +LVME + +I++ L E ++ +
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLL 170
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRY 228
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 229 YRAPEVILGMG---YKENVDIWSVGCIMGEM 256
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 186 IHRDLKPSNIVVKSDCTLKI 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 61
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 104
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 105 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 148
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 149 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 205
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 206 GRLPFYNQD 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 61 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 120
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S F GTP ++APE
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 181 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 220
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 87 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 146
Query: 676 GTVKL 680
G +K+
Sbjct: 147 GHIKI 151
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 108/254 (42%), Gaps = 53/254 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
IG G FG VY R + VA+K + + ++ ++ +E + LKHPN I R
Sbjct: 15 IGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G L++ LVME+ G G NR+ K L N+ V
Sbjct: 73 GVCLKEPNLCLVMEFARG------------------GPLNRVLSGKRIPPDI-LVNWAVQ 113
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHS---LGRIHRDVKAGNILL---TETG-----TVKLA 337
+ RG+NYLH + IHRD+K+ NIL+ E G +K+
Sbjct: 114 ---------------IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 338 DFGSASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
DFG A + S G WMAPEVI A + DVWS G+ EL + P+
Sbjct: 159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRA---SMFSKGSDVWSYGVLLWELLTGEVPFR 215
Query: 396 NMNAMSALYHIAQN 409
++ ++ Y +A N
Sbjct: 216 GIDGLAVAYGVAMN 229
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ L LKHPN I RG L++ LVME+ G + + KR + + + +
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-IPPDILVNWAVQIA 115
Query: 65 RGLNYLHS---LGRIHRDVKAGNILL---TETG-----TVKLADFGSASI--KCPANSFV 111
RG+NYLH + IHRD+K+ NIL+ E G +K+ DFG A + S
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA 175
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
G WMAPEVI A + DVWS G+
Sbjct: 176 GAYAWMAPEVIRA---SMFSKGSDVWSYGV 202
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS---LGRIHRDVKAGNILL 672
LVME+ G + + KR + + + + RG+NYLH + IHRD+K+ NIL+
Sbjct: 83 LVMEFARGGPLNRVLSGKR-IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 673 TE 674
+
Sbjct: 142 LQ 143
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 56
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 99
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 100 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 201 GRLPFYNQD 209
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S F GTP ++APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 176 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 215
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 676 GTVKL 680
G +K+
Sbjct: 142 GHIKI 146
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 56
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 99
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 100 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 201 GRLPFYNQD 209
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S F GTP ++APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 176 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 215
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 676 GTVKL 680
G +K+
Sbjct: 142 GHIKI 146
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 36/237 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ-LKHP 222
FE L+ +G G++G V+ R + + + M L K + A + R RQ L+H
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH- 114
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+R + + Y + + ++H I + + L Q + FTEH
Sbjct: 115 ---------IRQSPFLVTLHYAFQTET---KLHLILDYINGGELFTHLSQRERFTEH--- 159
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-- 340
E+ ++ L +LH LG I+RD+K NILL G V L DFG
Sbjct: 160 -------------EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Query: 341 ---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
A A F GT +MAP+++ D G +D VD WSLG+ EL P+
Sbjct: 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGVLMYELLTGASPF 262
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 31 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 90
L+++Y G + E E+ ++ L +LH LG I+RD+K NILL
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195
Query: 91 GTVKLADFG-----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
G V L DFG A A F GT +MAP+++ D G +D VD WSLG+
Sbjct: 196 GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGV 250
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 615 QLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L+++Y G + E E+ ++ L +LH LG I+RD+K NILL
Sbjct: 135 HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS 194
Query: 675 TGTVKL 680
G V L
Sbjct: 195 NGHVVL 200
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 60/249 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
F+ L+ +G G+FG V YYA ++ +E++ K ++ A + E
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTES 56
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 99
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ FTE A F + ++ L YLHS ++RD+K N++L + G
Sbjct: 100 RVFTEERARF----------------YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 334 VKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+K+ DFG S F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 390 RKPPYFNMN 398
+ P++N +
Sbjct: 201 GRLPFYNQD 209
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
S +L+ +HP + + VMEY G +R EE + ++
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWMAPE 120
L YLHS ++RD+K N++L + G +K+ DFG S F GTP ++APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 121 VILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
V +++ Y VD W LG+ + + F +D E++FE
Sbjct: 176 V---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFE 215
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VMEY G +R EE + ++ L YLHS ++RD+K N++L +
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 676 GTVKL 680
G +K+
Sbjct: 142 GHIKI 146
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLG-KQCAEKWADILK-EIRFLRQLKHPNTIEY 227
IG GS+G V A +R I AIK M+ +Q K + +K E+R +++L HPN
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 228 RGCYLRDHTAWLVMEYCLGS-ASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
Y + LVME C G D + V + + Q C + N
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 287 VH--KRPL----KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT--VKLAD 338
+H + L +E+ I+ I + L+YLH+ G HRD+K N L + + +KL D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 339 FGSASIKCPAN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
FG + N + GTPY++APEV+ +E Y K D WS G+ L
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES-YGPKCDAWSAGVLLHLLLMG 272
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
P+ +N + + N C ++ +++V+ ++
Sbjct: 273 AVPFPGVNDADTISQVL-NKKLCFENPNYNVLSPLA 307
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 51/185 (27%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS-----------------ASDIIEVHKR 49
L+++L HPN Y + LVME C G A D+++
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 50 PL-----------------------KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
P +E+ I+ I + L+YLH+ G HRD+K N L
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200
Query: 87 LTETGT--VKLADFGSASIKCPAN--------SFVGTPYWMAPEVILAMDEGQYDGKVDV 136
+ + +KL DFG + N + GTPY++APEV+ +E Y K D
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES-YGPKCDA 259
Query: 137 WSLGI 141
WS G+
Sbjct: 260 WSAGV 264
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 637 KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSNS 696
+E+ I+ I + L+YLH+ G HRD+K N L + + ++ D + K N+
Sbjct: 166 REKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 63/254 (24%)
Query: 155 FDKEDP----EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKW 206
F+ DP E+ + LR++G G+FG+V R + E+VA+KK+ + E
Sbjct: 2 FEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHL 58
Query: 207 ADILKEIRFLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D +EI L+ L+H N ++Y+G CY L+ME+ GS RE+
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL----------REY-- 106
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
LQ+ K +H L + S + +G+ YL + IHRD+
Sbjct: 107 ------LQKHKERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLAT 145
Query: 324 GNILLTETGTVKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
NIL+ VK+ DFG +K P S + +W APE ++ E ++
Sbjct: 146 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSV 199
Query: 374 KVDVWSLGITCIEL 387
DVWS G+ EL
Sbjct: 200 ASDVWSFGVVLYEL 213
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+ME+ GS + ++ HK + ++ S +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 185 -FWYAPE---SLTESKFSVASDVWSFGVV 209
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+ME+ GS + ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 92 KLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 674 ETGTVKL 680
VK+
Sbjct: 152 NENRVKI 158
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR-QLKHPNTIEYR 228
+G GSFG V+ A + + AIK + + + E R L +HP
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
+ + VMEY G D++ +H++ H
Sbjct: 85 CTFQTKENLFFVMEYLNGG--DLM--------YHIQS---------------------CH 113
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK--- 345
K L A + ++ GL +LHS G ++RD+K NILL + G +K+ADFG
Sbjct: 114 KFDLSRATFYA--AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171
Query: 346 -CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALY 404
N F GTP ++APE++L +Y+ VD WS G+ E+ + P+ + L+
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELF 227
Query: 405 HIAQNDTP 412
H + D P
Sbjct: 228 HSIRMDNP 235
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
+HP + + VMEY G I HK L A + ++ GL +
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQF 133
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK----CPANSFVGTPYWMAPEVILAM 125
LHS G ++RD+K NILL + G +K+ADFG N F GTP ++APE++L
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 126 DEGQYDGKVDVWSLGITPGSLKDPEIAEL-FDKEDPEKIFEDLR 168
+Y+ VD WS G+ L + I + F +D E++F +R
Sbjct: 194 ---KYNHSVDWWSFGVL---LYEMLIGQSPFHGQDEEELFHSIR 231
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
VMEY G I HK L A + ++ GL +LHS G ++RD+K NILL
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 674 ETGTVKL 680
+ G +K+
Sbjct: 153 KDGHIKI 159
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRD--HTAWLVMEYCLGSASDIIE-VHKRPLKEEEIAAICSG 62
LLR+L+H N I+ + ++VMEYC+ ++++ V ++ +
Sbjct: 58 QLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ GL YLHS G +H+D+K GN+LLT GT+K++ G A P + G+P +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 117 MAPEVILAMDEGQYDG-KVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSF 175
PE+ +D + G KVD+WS G+T ++ F+ ++ K+FE+ IG GS+
Sbjct: 178 QPPEIANGLD--TFSGFKVDIWSAGVTLYNITTGLYP--FEGDNIYKLFEN---IGKGSY 230
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 48/252 (19%)
Query: 170 IGHGSFGAVYY---ARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G GS+G V + L R + +KK E A++ KEI+ LR+L+H N I+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGE--ANVKKEIQLLRRLRHKNVIQ 70
Query: 227 YRGCYLRD--HTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ ++VMEYC+ ++++ E+ F V QL
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLD-SVPEKRFPVCQAHGYFCQL----------- 118
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+ GL YLHS G +H+D+K GN+LLT GT+K++ G A
Sbjct: 119 --------------------IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158
Query: 345 KCP------ANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNM 397
P + G+P + PE+ +D + G KVD+WS G+T + P+
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLD--TFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
Query: 398 NAMSALYHIAQN 409
N +I +
Sbjct: 217 NIYKLFENIGKG 228
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIE-VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEYC+ ++++ V ++ + ++ GL YLHS G +H+D+K GN+LLT
Sbjct: 85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT 144
Query: 675 TGTVKL 680
GT+K+
Sbjct: 145 GGTLKI 150
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 53/241 (21%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 65
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 107
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 108 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 334 VKLADFGSASIKCPANSF--VGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
VK+ DFG + F V P +W APE ++ E ++ DVWS G+ E
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE---SLTESKFSVASDVWSFGVVLYE 209
Query: 387 L 387
L
Sbjct: 210 L 210
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF--VGTP-----YW 116
+G+ YL + IHRD+ NIL+ VK+ DFG + F V P +W
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE ++ E ++ DVWS G+
Sbjct: 184 YAPE---SLTESKFSVASDVWSFGVV 206
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 674 ETGTVKL 680
VK+
Sbjct: 149 NENRVKI 155
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + + ++VME + S +I++ L E ++ +
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G+ G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGVIMGEM 218
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 55/238 (23%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME------------------- 122
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 123 -----------------LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G+ E+
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGVIMGEM 218
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDATLKI 167
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 59/339 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ DL+ +G G G V+ A + VAIKK+ Q + L+EI+ +R+L H N
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA---LREIKIIRRLDHDN 69
Query: 224 TIEY------RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
++ G L D +GS +++ V +I +E+ + N L+Q
Sbjct: 70 IVKVFEILGPSGSQLTDD---------VGSLTELNSV-YIVQEYMETDLANVLEQGPLLE 119
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 336
EH LF +++ LRGL Y+HS +HRD+K N+ + TE +K+
Sbjct: 120 EHARLFMYQL-----------------LRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162
Query: 337 ADFGSASIKCPANSFVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
DFG A I P S G T ++ +P ++L+ Y +D+W+ G E+
Sbjct: 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS--PNNYTKAIDMWAAGCIFAEMLT 220
Query: 390 RKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQ 449
K + + + + I ++ P + D + ++ P + N M+ +
Sbjct: 221 GKTLFAGAHELEQMQLILES-IPVVHEEDRQELLSVI-------PVYIRNDMTEPHKPLT 272
Query: 450 NDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
P + S F+ L +P DR ++ L+H
Sbjct: 273 QLLPGI-----SREAVDFLEQILTFSPMDRLTAEEALSH 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 7 LLRQLKHPNTIEY------RGCYLRD--------HTAWLVMEYCLGSASDIIEVHKRPLK 52
++R+L H N ++ G L D ++ ++V EY ++++E + PL
Sbjct: 61 IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLL 118
Query: 53 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASIKCPANSFV 111
EE +LRGL Y+HS +HRD+K N+ + TE +K+ DFG A I P S
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK 178
Query: 112 G-------TPYWMAPEVILAMDEGQYDGKVDVWSLG 140
G T ++ +P ++L+ Y +D+W+ G
Sbjct: 179 GHLSEGLVTKWYRSPRLLLS--PNNYTKAIDMWAAG 212
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 611 LFSPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
L S +V EY ++++E + PL EE +LRGL Y+HS +HRD+K N+
Sbjct: 94 LNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANL 151
Query: 671 LL-TETGTVKL 680
+ TE +K+
Sbjct: 152 FINTEDLVLKI 162
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 68
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 110
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 111 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 209
Query: 384 CIEL 387
EL
Sbjct: 210 LYEL 213
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 185 -FWYAPE---SLTESKFSVASDVWSFGVV 209
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 92 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 674 ETGTVKL 680
VK+
Sbjct: 152 NENRVKI 158
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 44/240 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E ++ IG G+FG V R +R++ A+K +S A +E + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + D ++VMEY G D++ + +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNL---------------------------MS 166
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS-- 341
N++V E+ + V+ L+ +HS+G IHRDVK N+LL ++G +KLADFG+
Sbjct: 167 NYDV-----PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 342 -----ASIKCPANSFVGTPYWMAPEVILAM-DEGQYDGKVDVWSLGITCIELAERKPPYF 395
++C ++ VGTP +++PEV+ + +G Y + D WS+G+ E+ P++
Sbjct: 222 KMNKEGMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHS 72
P ++ + D ++VMEY G D++ + E+ A + V+ L+ +HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGS-------ASIKCPANSFVGTPYWMAPEVILAM 125
+G IHRDVK N+LL ++G +KLADFG+ ++C ++ VGTP +++PEV+ +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC--DTAVGTPDYISPEVLKSQ 249
Query: 126 -DEGQYDGKVDVWSLGI 141
+G Y + D WS+G+
Sbjct: 250 GGDGYYGRECDWWSVGV 266
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G D++ + E+ A + V+ L+ +HS+G IHRDVK N+LL +
Sbjct: 151 MVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 675 TGTVKL 680
+G +KL
Sbjct: 209 SGHLKL 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 65
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 107
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 108 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 206
Query: 384 CIEL 387
EL
Sbjct: 207 LYEL 210
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 181
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 182 -FWYAPE---SLTESKFSVASDVWSFGVV 206
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 674 ETGTVKL 680
VK+
Sbjct: 149 NENRVKI 155
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 41/235 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ L ++G G++G VY A+ R IVA+K++ L + + ++EI L++L HPN
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + LV E+ M L+++
Sbjct: 81 IVSLIDVIHSERCLTLVFEF----------------------MEKDLKKV---------- 108
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ +K L++ +I +LRG+ + H +HRD+K N+L+ G +KLADFG A
Sbjct: 109 -LDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ P S+ V T ++ AP+V+ M +Y VD+WS+G E+ KP +
Sbjct: 168 AFGIPVRSYTHEVVTLWYRAPDVL--MGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
SLL++L HPN + + LV E+ +++ +K L++ +I +LR
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ + H +HRD+K N+L+ G +KLADFG A + P S+ V T ++ AP+V
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 122 ILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
+ M +Y VD+WS+G + PG D ++ ++F
Sbjct: 191 L--MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ +++ +K L++ +I +LRG+ + H +HRD+K N+L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
Query: 676 GTVKL 680
G +KL
Sbjct: 156 GALKL 160
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++++G G++G V + ++ AIK + +L E+ L+QL HPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + +LVME G LF
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGE---------------------------------LF 92
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG 340
+ + ++ E + A I VL G YLH +HRD+K N+LL + +K+ DFG
Sbjct: 93 DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 152
Query: 341 SAS---IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
++ + +GT Y++APEV+ +YD K DVWS G+ L PP+
Sbjct: 153 LSAHFEVGGKMKERLGTAYYIAPEVL----RKKYDEKCDVWSCGVILYILLCGYPPF 205
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
++L+QL HPN ++ + +LVME Y G D I + ++ E + A I VL
Sbjct: 56 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVL 114
Query: 65 RGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSAS---IKCPANSFVGTPYWMA 118
G YLH +HRD+K N+LL + +K+ DFG ++ + +GT Y++A
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV+ +YD K DVWS G+
Sbjct: 175 PEVL----RKKYDEKCDVWSCGV 193
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
LVME Y G D I + ++ E + A I VL G YLH +HRD+K N+LL
Sbjct: 81 LVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLL 137
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 44/240 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E ++ IG G+FG V R +R++ A+K +S A +E + P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + D ++VMEY G D++ + +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNL---------------------------MS 161
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS-- 341
N++V E+ + V+ L+ +HS+G IHRDVK N+LL ++G +KLADFG+
Sbjct: 162 NYDV-----PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216
Query: 342 -----ASIKCPANSFVGTPYWMAPEVILAM-DEGQYDGKVDVWSLGITCIELAERKPPYF 395
++C ++ VGTP +++PEV+ + +G Y + D WS+G+ E+ P++
Sbjct: 217 KMNKEGMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHS 72
P ++ + D ++VMEY G D++ + E+ A + V+ L+ +HS
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGS-------ASIKCPANSFVGTPYWMAPEVILAM 125
+G IHRDVK N+LL ++G +KLADFG+ ++C ++ VGTP +++PEV+ +
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC--DTAVGTPDYISPEVLKSQ 244
Query: 126 -DEGQYDGKVDVWSLGI 141
+G Y + D WS+G+
Sbjct: 245 GGDGYYGRECDWWSVGV 261
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G D++ + E+ A + V+ L+ +HS+G IHRDVK N+LL +
Sbjct: 146 MVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 203
Query: 675 TGTVKL 680
+G +KL
Sbjct: 204 SGHLKL 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 64
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 106
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 107 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 151
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 205
Query: 384 CIEL 387
EL
Sbjct: 206 LYEL 209
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 180
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 181 -FWYAPE---SLTESKFSVASDVWSFGVV 205
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 88 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 147
Query: 674 ETGTVKL 680
VK+
Sbjct: 148 NENRVKI 154
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 41/235 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ L ++G G++G VY A+ R IVA+K++ L + + ++EI L++L HPN
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ + LV E+ M L+++
Sbjct: 81 IVSLIDVIHSERCLTLVFEF----------------------MEKDLKKV---------- 108
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+ +K L++ +I +LRG+ + H +HRD+K N+L+ G +KLADFG A
Sbjct: 109 -LDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ P S+ V T ++ AP+V+ M +Y VD+WS+G E+ KP +
Sbjct: 168 AFGIPVRSYTHEVVTLWYRAPDVL--MGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
SLL++L HPN + + LV E+ +++ +K L++ +I +LR
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ + H +HRD+K N+L+ G +KLADFG A + P S+ V T ++ AP+V
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 122 ILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELF 155
+ M +Y VD+WS+G + PG D ++ ++F
Sbjct: 191 L--MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ +++ +K L++ +I +LRG+ + H +HRD+K N+L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
Query: 676 GTVKL 680
G +KL
Sbjct: 156 GALKL 160
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 114/281 (40%), Gaps = 51/281 (18%)
Query: 160 PEKI----FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGK----QCAEKWADILK 211
PEKI FE LR +G G +G V+ R + I M L K + A+ A
Sbjct: 11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E L ++KHP ++ + +L++EY G E +E G ++
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG----------ELFMQLEREGIFME 120
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
CF L E +A L +LH G I+RD+K NI+L
Sbjct: 121 DTACFY--------------LAEISMA---------LGHLHQKGIIYRDLKPENIMLNHQ 157
Query: 332 GTVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
G VKL DFG S ++F GT +MAPE+++ ++ VD WSLG ++
Sbjct: 158 GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM---RSGHNRAVDWWSLGALMYDM 214
Query: 388 AERKPPYFNMNAMSALYHIAQ---NDTPCLQSSDWSVIKTI 425
PP+ N + I + N P L ++K +
Sbjct: 215 LTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAI-CS 61
A ++L ++KHP ++ + +L++EY L +++ + + E+ A +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEY-LSGGELFMQLEREGIFMEDTACFYLA 128
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWM 117
+ L +LH G I+RD+K NI+L G VKL DFG S ++F GT +M
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 118 APEVILAMDEGQYDGKVDVWSLG 140
APE+++ ++ VD WSLG
Sbjct: 189 APEILM---RSGHNRAVDWWSLG 208
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAI-CSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY L +++ + + E+ A + + L +LH G I+RD+K NI+L
Sbjct: 98 LILEY-LSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH 156
Query: 675 TGTVKL 680
G VKL
Sbjct: 157 QGHVKL 162
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 83
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 125
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 126 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 224
Query: 384 CIEL 387
EL
Sbjct: 225 LYEL 228
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 199
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 200 -FWYAPE---SLTESKFSVASDVWSFGVV 224
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 166
Query: 674 ETGTVKL 680
VK+
Sbjct: 167 NENRVKI 173
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 65
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 107
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 108 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 206
Query: 384 CIEL 387
EL
Sbjct: 207 LYEL 210
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 181
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 182 -FWYAPE---SLTESKFSVASDVWSFGVV 206
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 674 ETGTVKL 680
VK+
Sbjct: 149 NENRVKI 155
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSR----EIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 63
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 106 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 150
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 204
Query: 384 CIEL 387
EL
Sbjct: 205 LYEL 208
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 179
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 180 -FWYAPE---SLTESKFSVASDVWSFGVV 204
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 87 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 146
Query: 674 ETGTVKL 680
VK+
Sbjct: 147 NENRVKI 153
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 83
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 125
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHRD+ NIL+
Sbjct: 126 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 224
Query: 384 CIEL 387
EL
Sbjct: 225 LYEL 228
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G+ YL + IHRD+ NIL+ VK+ DFG +K P S +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-- 199
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 200 -FWYAPE---SLTESKFSVASDVWSFGVV 224
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHRD+ NIL+
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 166
Query: 674 ETGTVKL 680
VK+
Sbjct: 167 NENRVKI 173
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK-RPLKEEEIAAICSGVL 64
++L++L HPN ++ + L M + L + ++EV +PL E++ ++
Sbjct: 88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLI 147
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF----VGTPYWMAPE 120
+G+ YLH IHRD+K N+L+ E G +K+ADFG ++ +++ VGTP +MAPE
Sbjct: 148 KGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE 207
Query: 121 VILAMDEGQYDGK-VDVWSLGIT 142
L+ + GK +DVW++G+T
Sbjct: 208 S-LSETRKIFSGKALDVWAMGVT 229
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 138/354 (38%), Gaps = 104/354 (29%)
Query: 169 EIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQ-----------CAEKWA 207
EIG GS+G V YYA ++S++ + I++ + + C +
Sbjct: 20 EIGKGSYGVVKLAYNENDNTYYAMKVLSKKKL-IRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 208 DI---LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVE 264
I +EI L++L HPN ++ + L M + L + ++EV +
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------- 131
Query: 265 GMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAG 324
+PL E++ +++G+ YLH IHRD+K
Sbjct: 132 -------------------------KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPS 166
Query: 325 NILLTETGTVKLADFGSASIKCPANSF----VGTPYWMAPEVILAMDEGQYDGK-VDVWS 379
N+L+ E G +K+ADFG ++ +++ VGTP +MAPE L+ + GK +DVW+
Sbjct: 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPES-LSETRKIFSGKALDVWA 225
Query: 380 LGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMN 439
+G+T + P+ + M CL S I S A P
Sbjct: 226 MGVTLYCFVFGQCPFMDERIM------------CLHSK-------IKSQALEFP------ 260
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
D P D ++ ++ L KNP R + H VTR
Sbjct: 261 -----------DQP-----DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 616 LVMEYCLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L M + L + ++EV +PL E++ +++G+ YLH IHRD+K N+L+ E
Sbjct: 113 LYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172
Query: 675 TGTVKL---DTPDEQAGNDSSKSNSITS 699
G +K+ +E G+D+ SN++ +
Sbjct: 173 DGHIKIADFGVSNEFKGSDALLSNTVGT 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 44/240 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+E ++ IG G+FG V R +R++ A+K +S A +E + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + D ++VMEY G D++ + +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNL---------------------------MS 166
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS-- 341
N++V E+ + V+ L+ +HS+G IHRDVK N+LL ++G +KLADFG+
Sbjct: 167 NYDV-----PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 342 -----ASIKCPANSFVGTPYWMAPEVILAM-DEGQYDGKVDVWSLGITCIELAERKPPYF 395
++C ++ VGTP +++PEV+ + +G Y + D WS+G+ E+ P++
Sbjct: 222 KMNKEGMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHS 72
P ++ + D ++VMEY G D++ + E+ A + V+ L+ +HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGS-------ASIKCPANSFVGTPYWMAPEVILAM 125
+G IHRDVK N+LL ++G +KLADFG+ ++C ++ VGTP +++PEV+ +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC--DTAVGTPDYISPEVLKSQ 249
Query: 126 -DEGQYDGKVDVWSLGI 141
+G Y + D WS+G+
Sbjct: 250 GGDGYYGRECDWWSVGV 266
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G D++ + E+ A + V+ L+ +HS+G IHRDVK N+LL +
Sbjct: 151 MVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 675 TGTVKL 680
+G +KL
Sbjct: 209 SGHLKL 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 60/243 (24%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+++ IG G FG V+ A+ + + IK++ Y ++ +E++ L +L H N
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-------REVKALAKLDHVN 65
Query: 224 TIEYRGCY--------------LRDHTA--WLVMEYCLGSASDIIEVHWIEREFHVEGMG 267
+ Y GC+ R T ++ ME+C + WIE+ G
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE----QWIEKR-----RG 116
Query: 268 NRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 327
+L ++ AL FE + +G++Y+HS I+RD+K NI
Sbjct: 117 EKLDKV------LALELFE----------------QITKGVDYIHSKKLINRDLKPSNIF 154
Query: 328 LTETGTVKLADFG-SASIKCPANSF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 384
L +T VK+ DFG S+K GT +M+PE I + D G+ +VD+++LG+
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGK---EVDLYALGLIL 211
Query: 385 IEL 387
EL
Sbjct: 212 AEL 214
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 43/192 (22%)
Query: 8 LRQLKHPNTIEYRGCY--------------LRDHTA--WLVMEYC-LGSASDIIEVHKRP 50
L +L H N + Y GC+ R T ++ ME+C G+ IE +R
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRG 116
Query: 51 LKEEEIAAI--CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPA 107
K +++ A+ + +G++Y+HS I+RD+K NI L +T VK+ DFG S+K
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176
Query: 108 NSF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPG-----------------SLKD 148
GT +M+PE I + D G+ +VD+++LG+ L+D
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAELLHVCDTAFETSKFFTDLRD 233
Query: 149 PEIAELFDKEDP 160
I+++FDK++
Sbjct: 234 GIISDIFDKKEK 245
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 618 MEYC-LGSASDIIEVHKRPLKEEEIAAI--CSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
ME+C G+ IE +R K +++ A+ + +G++Y+HS I+RD+K NI L +
Sbjct: 99 MEFCDKGTLEQWIE-KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD 157
Query: 675 TGTVKL 680
T VK+
Sbjct: 158 TKQVKI 163
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 46/237 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKH 221
F+ +R +G G FG VY AR ++ I+A+K + S L K+ E + +EI L+H
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH--QLRREIEIQSHLRH 73
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
PN + + +L++E+ G ++L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFA--------------------PRGELYKEL-------- 105
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+ H R E+ A + L+Y H IHRD+K N+L+ G +K+ADFG
Sbjct: 106 ----QKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG- 159
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P+ GT ++ PE+I EG+ +D KVD+W G+ C E PP+
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMI----EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + + +L++E+ G ++ H R E+ A + L+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALH 128
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y H IHRD+K N+L+ G +K+ADFG S+ P+ GT ++ PE+I
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFG-WSVHAPSLRRRXMCGTLDYLPPEMI--- 184
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+W G+
Sbjct: 185 -EGKTHDEKVDLWCAGV 200
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++E+ G ++ H R E+ A + L+Y H IHRD+K N+L+
Sbjct: 91 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY 149
Query: 675 TGTVKL 680
G +K+
Sbjct: 150 KGELKI 155
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G CI
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVG--CI 214
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + + ++VME + S +I++ L E ++ +
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDATLKI 167
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 56/247 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA-DILKEIRFLRQLKHP 222
+E L +IG G+FG V+ AR + + VA+KK+ L + E + L+EI+ L+ LKH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLLKHE 77
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + ++E C AS NR C + +
Sbjct: 78 NVVN-------------LIEICRTKASPY----------------NR-----CKGSIYLV 103
Query: 283 FNFEVHKR---------PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
F+F H EI + +L GL Y+H +HRD+KA N+L+T G
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV 163
Query: 334 VKLADFGSA-SIKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+KLADFG A + NS V T ++ PE++L E Y +D+W G
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAGCIMA 221
Query: 386 ELAERKP 392
E+ R P
Sbjct: 222 EMWTRSP 228
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 6 SLLRQLKHPNTIE-----------YRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEE 54
+L+ LKH N + Y C + +LV ++C + ++
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRC---KGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANS---- 109
EI + +L GL Y+H +HRD+KA N+L+T G +KLADFG A + NS
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 110 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
V T ++ PE++L E Y +D+W G
Sbjct: 186 YXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAG 217
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV ++C + ++ EI + +L GL Y+H +HRD+KA N+L+T
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 161
Query: 676 GTVKL 680
G +KL
Sbjct: 162 GVLKL 166
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 56/247 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA-DILKEIRFLRQLKHP 222
+E L +IG G+FG V+ AR + + VA+KK+ L + E + L+EI+ L+ LKH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLLKHE 77
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + ++E C AS NR C + +
Sbjct: 78 NVVN-------------LIEICRTKASPY----------------NR-----CKASIYLV 103
Query: 283 FNFEVHKR---------PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
F+F H EI + +L GL Y+H +HRD+KA N+L+T G
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV 163
Query: 334 VKLADFGSA-SIKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+KLADFG A + NS V T ++ PE++L E Y +D+W G
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAGCIMA 221
Query: 386 ELAERKP 392
E+ R P
Sbjct: 222 EMWTRSP 228
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 6 SLLRQLKHPNTIE-----------YRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEE 54
+L+ LKH N + Y C + +LV ++C + ++
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRC---KASIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANS---- 109
EI + +L GL Y+H +HRD+KA N+L+T G +KLADFG A + NS
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 110 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
V T ++ PE++L E Y +D+W G
Sbjct: 186 YXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAG 217
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV ++C + ++ EI + +L GL Y+H +HRD+KA N+L+T
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 161
Query: 676 GTVKL 680
G +KL
Sbjct: 162 GVLKL 166
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 113/281 (40%), Gaps = 51/281 (18%)
Query: 160 PEKI----FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGK----QCAEKWADILK 211
PEKI FE LR +G G +G V+ R + I M L K + A+ A
Sbjct: 11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E L ++KHP ++ + +L++EY G E +E G ++
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG----------ELFMQLEREGIFME 120
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
CF L E +A L +LH G I+RD+K NI+L
Sbjct: 121 DTACFY--------------LAEISMA---------LGHLHQKGIIYRDLKPENIMLNHQ 157
Query: 332 GTVKLADFG----SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
G VKL DFG S + F GT +MAPE+++ ++ VD WSLG ++
Sbjct: 158 GHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM---RSGHNRAVDWWSLGALMYDM 214
Query: 388 AERKPPYFNMNAMSALYHIAQ---NDTPCLQSSDWSVIKTI 425
PP+ N + I + N P L ++K +
Sbjct: 215 LTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAI-CS 61
A ++L ++KHP ++ + +L++EY L +++ + + E+ A +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEY-LSGGELFMQLEREGIFMEDTACFYLA 128
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----SASIKCPANSFVGTPYWM 117
+ L +LH G I+RD+K NI+L G VKL DFG S + F GT +M
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 118 APEVILAMDEGQYDGKVDVWSLG 140
APE+++ ++ VD WSLG
Sbjct: 189 APEILM---RSGHNRAVDWWSLG 208
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAI-CSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++EY L +++ + + E+ A + + L +LH G I+RD+K NI+L
Sbjct: 98 LILEY-LSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH 156
Query: 675 TGTVKL 680
G VKL
Sbjct: 157 QGHVKL 162
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
LL+ + H N I + T +LVME + +I + L E ++ +
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP---ANSFVGTPYWM 117
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A C +V T Y+
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYR 192
Query: 118 APEVILAMDEGQYDGKVDVWSLGITPGSL 146
APEVIL M Y VD+WS+G G L
Sbjct: 193 APEVILGMG---YAANVDIWSVGCIMGEL 218
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 99/238 (41%), Gaps = 51/238 (21%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K ++ L+ IG G+ G V A V VA+KK+S Q K A +E+ L+ +
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA--YRELVLLKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I + E E M L Q+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A C +V T Y+ APEVIL M Y VD+WS+G EL +
Sbjct: 166 KILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG---YAANVDIWSVGCIMGELVK 220
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I + L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++++G G++G V + ++ AIK + +L E+ L+QL HPN
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + +LVME G LF
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGE---------------------------------LF 109
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFG 340
+ + ++ E + A I VL G YLH +HRD+K N+LL + +K+ DFG
Sbjct: 110 DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 169
Query: 341 SAS---IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
++ + +GT Y++APEV+ +YD K DVWS G+ L PP+
Sbjct: 170 LSAHFEVGGKMKERLGTAYYIAPEVL----RKKYDEKCDVWSCGVILYILLCGYPPF 222
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
++L+QL HPN ++ + +LVME Y G D I + ++ E + A I VL
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVL 131
Query: 65 RGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSAS---IKCPANSFVGTPYWMA 118
G YLH +HRD+K N+LL + +K+ DFG ++ + +GT Y++A
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV+ +YD K DVWS G+
Sbjct: 192 PEVL----RKKYDEKCDVWSCGV 210
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
LVME Y G D I + ++ E + A I VL G YLH +HRD+K N+LL
Sbjct: 98 LVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLL 154
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 103/263 (39%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVA--IKKMSYLGKQCAEKWADILK 211
F +ED E +E E+G G F V R +E A IKK + +I +
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E+ LR+++HPN I + L++E G
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE----------------------- 101
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
LF+F K L E+E +L G++YLHS H D+K NI+L +
Sbjct: 102 ----------LFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK 151
Query: 332 GT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 384
+KL DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 152 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVIT 208
Query: 385 IELAERKPPYFNMNAMSALYHIA 407
L P+ L +I+
Sbjct: 209 YILLSGASPFLGETKQETLTNIS 231
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++LR+++HPN I + L++E G K L E+E +L
Sbjct: 67 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G++YLHS H D+K NI+L + +KL DFG A N F GTP ++A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L E+E +L G++YLHS H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 122/324 (37%), Gaps = 53/324 (16%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 2 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 99
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 100 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 205
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAER----KPPYFNMN 439
L P+ L +++ + + +S ++ R K P M
Sbjct: 206 TYILLSGASPFLGDTKQETLANVSAVNYE-FEDEYFSNTSALAKDFIRRLLVKDPKKRMT 264
Query: 440 AMSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 265 IQDSLQHPWIKPKDTQQALSSAWS 288
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 185 PEIVNYEPLGL---EADMWSIGV 204
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 676 GTVK 679
K
Sbjct: 150 NVPK 153
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 55/239 (23%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L ++G G++ VY + ++ +VA+K++ ++ A A ++E+ L+ LKH N +
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA--IREVSLLKDLKHANIVT 64
Query: 227 YRGCYLRDHTAWLVMEYC-------LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+ + LV EY L +II +H ++
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK--------------------- 103
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
LF F++ LRGL Y H +HRD+K N+L+ E G +KLADF
Sbjct: 104 --LFLFQL-----------------LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF 144
Query: 340 GSASIK-CPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A K P ++ V T ++ P+++L + Y ++D+W +G E+A +P +
Sbjct: 145 GLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD--YSTQIDMWGVGCIFYEMATGRPLF 201
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 20/146 (13%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-------LGSASDIIEVHKRPLKEEEIAA 58
SLL+ LKH N + + + LV EY L +II +H +
Sbjct: 52 SLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN-------VKL 104
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK-CPANSF---VGTP 114
+LRGL Y H +HRD+K N+L+ E G +KLADFG A K P ++ V T
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 115 YWMAPEVILAMDEGQYDGKVDVWSLG 140
++ P+++L + Y ++D+W +G
Sbjct: 165 WYRPPDILLGSTD--YSTQIDMWGVG 188
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 613 SPQLVMEYC-------LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 665
S LV EY L +II +H + +LRGL Y H +HRD+
Sbjct: 74 SLTLVFEYLDKDLKQYLDDCGNIINMHN-------VKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 666 KAGNILLTETGTVKL 680
K N+L+ E G +KL
Sbjct: 127 KPQNLLINERGELKL 141
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 121/323 (37%), Gaps = 51/323 (15%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPC---LQSSDWSVIKTISSTAERKPPYFNMNA 440
L P+ L +++ + S+ ++ K K P M
Sbjct: 207 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 441 MSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 267 QDSLQHPWIKPKDTQQALSSAWS 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 61/250 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
FE L+ +G G+FG V YYA ++ +E++ K ++ A L E
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTEN 199
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 200 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 242
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTETG 332
+ F+E A F + ++ L+YLHS ++RD+K N++L + G
Sbjct: 243 RVFSEDRARF----------------YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 286
Query: 333 TVKLADFG--SASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+K+ DFG IK A +F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 287 HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMM 343
Query: 389 ERKPPYFNMN 398
+ P++N +
Sbjct: 344 CGRLPFYNQD 353
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ +L+ +HP + + VMEY G +R E+ + ++
Sbjct: 199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 65 RGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFG--SASIKCPA--NSFVGTPYWMAP 119
L+YLHS + +RD+K N++L + G +K+ DFG IK A +F GTP ++AP
Sbjct: 259 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
EV +++ Y VD W LG+ + + F +D EK+FE
Sbjct: 319 EV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFE 359
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTE 674
VMEY G +R E+ + ++ L+YLHS ++RD+K N++L +
Sbjct: 225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 284
Query: 675 TGTVKL 680
G +K+
Sbjct: 285 DGHIKI 290
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 45/262 (17%)
Query: 196 SYLGKQCAEKWADILKEIRFLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
S+ ++ E LKE+ LR++ HPN I+ + Y + +LV +
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD------------ 104
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
+ LF++ K L E+E I +L + LH L
Sbjct: 105 ---------------------LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVI-LAMDEGQ 370
+HRD+K NILL + +KL DFG + P S GTP ++APE+I +M++
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 371 --YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDW----SVIKT 424
Y +VD+WS G+ L PP+++ M L I + S +W +K
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ-FGSPEWDDYSDTVKD 262
Query: 425 ISSTAERKPPYFNMNAMSALYH 446
+ S P A AL H
Sbjct: 263 LVSRFLVVQPQKRYTAEEALAH 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 7 LLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVL 64
+LR++ HPN I+ + Y + +LV + G D + K L E+E I +L
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALL 134
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEV 121
+ LH L +HRD+K NILL + +KL DFG + P S GTP ++APE+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 122 I-LAMDEGQ--YDGKVDVWSLGITPGSL 146
I +M++ Y +VD+WS G+ +L
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
K L E+E I +L + LH L +HRD+K NILL + +KL
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL 165
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME------------------- 122
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
L E ++ + +L G+ +LHS G IHRD+K NI++ T+
Sbjct: 123 -----------------LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G CI
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVG--CI 214
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
L++ + H N I + + ++VME + S +I++ L E ++ +
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLL 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----Y 115
+L G+ +LHS G IHRD+K NI++ T+K+ DFG A + SF+ TP Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--RTAGTSFMMTPYVVTRY 190
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ APEVIL M Y VD+WS+G G +
Sbjct: 191 YRAPEVILGMG---YKENVDIWSVGCIMGEM 218
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDATLKI 167
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 119/301 (39%), Gaps = 80/301 (26%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVA-IKKMSYLGKQCAEKWADILKE 212
F+ LR +G GSFG V YYA ++ +EIV +K++ + E
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-----------E 56
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
L + HP I G + +++M+Y G + + L++
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGE-----------------LFSLLRK 99
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
+ F P+ + A +C L YLHS I+RD+K NILL + G
Sbjct: 100 SQRFPN------------PVAKFYAAEVCLA----LEYLHSKDIIYRDLKPENILLDKNG 143
Query: 333 TVKLADFGSASIKCPANSFV--GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+K+ DFG A P ++ GTP ++APEV+ Y+ +D WS GI E+
Sbjct: 144 HIKITDFGFAKY-VPDVTYXLCGTPDYIAPEVV---STKPYNKSIDWWSFGILIYEMLAG 199
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQN 450
P+++ N M + I + R PP+FN + L +
Sbjct: 200 YTPFYDSNTMKTY-------------------EKILNAELRFPPFFNEDVKDLLSRLITR 240
Query: 451 D 451
D
Sbjct: 241 D 241
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKR---PLKEEEIAAICSG 62
+L + HP I G + +++M+Y G ++ +R P+ + A +C
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV--GTPYWMAPE 120
L YLHS I+RD+K NILL + G +K+ DFG A P ++ GTP ++APE
Sbjct: 119 ----LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY-VPDVTYXLCGTPDYIAPE 173
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V+ Y+ +D WS GI
Sbjct: 174 VV---STKPYNKSIDWWSFGI 191
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 616 LVMEYCLGSA-SDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
++M+Y G ++ +R P+ + A +C L YLHS I+RD+K NIL
Sbjct: 83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSKDIIYRDLKPENIL 138
Query: 672 LTETGTVKL 680
L + G +K+
Sbjct: 139 LDKNGHIKI 147
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G CI
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVG--CI 214
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + S +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDATLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDATLKI 167
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGV 63
SLL+ L HPN I+ + +LV E+ G II HK E + A I +
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQI 155
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGT---VKLADFGSASIKCPANSF---VGTPYWM 117
L G+ YLH +HRD+K NILL + +K+ DFG +S +GT Y++
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APEV+ + +Y+ K DVWS G+
Sbjct: 216 APEVL----KKKYNEKCDVWSCGV 235
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 57/280 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIK--KMSYLGK-------QCAEKW-ADILKEIRFL 216
+R++G G++G V + AIK K S K + EK+ +I EI L
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ L HPN I+ + +LV E+ G G +Q+
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEG--------------------GELFEQI--- 137
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT--- 333
+++ E + A I +L G+ YLH +HRD+K NILL +
Sbjct: 138 ----------INRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 334 VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
+K+ DFG +S +GT Y++APEV+ + +Y+ K DVWS G+ L
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL----KKKYNEKCDVWSCGVIMYILLCG 243
Query: 391 KPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAE 430
PP+ N + + + +DW K IS A+
Sbjct: 244 YPPFGGQNDQDIIKKVEKG-KYYFDFNDW---KNISDEAK 279
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
LV E+ G II HK E + A I +L G+ YLH +HRD+K NILL
Sbjct: 123 LVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE 180
Query: 674 ETGTV 678
++
Sbjct: 181 NKNSL 185
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 56/247 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA-DILKEIRFLRQLKHP 222
+E L +IG G+FG V+ AR + + VA+KK+ L + E + L+EI+ L+ LKH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLLKHE 77
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + ++E C AS NR C + +
Sbjct: 78 NVVN-------------LIEICRTKASPY----------------NR-----CKGSIYLV 103
Query: 283 FNFEVHKR---------PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
F+F H EI + +L GL Y+H +HRD+KA N+L+T G
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV 163
Query: 334 VKLADFGSA-SIKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+KLADFG A + NS V T ++ PE++L E Y +D+W G
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAGCIMA 221
Query: 386 ELAERKP 392
E+ R P
Sbjct: 222 EMWTRSP 228
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 6 SLLRQLKHPNTIE-----------YRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEE 54
+L+ LKH N + Y C + +LV ++C + ++
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRC---KGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANS---- 109
EI + +L GL Y+H +HRD+KA N+L+T G +KLADFG A + NS
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 110 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
V T ++ PE++L E Y +D+W G
Sbjct: 186 YXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAG 217
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV ++C + ++ EI + +L GL Y+H +HRD+KA N+L+T
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 161
Query: 676 GTVKL 680
G +KL
Sbjct: 162 GVLKL 166
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 56/247 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA-DILKEIRFLRQLKHP 222
+E L +IG G+FG V+ AR + + VA+KK+ L + E + L+EI+ L+ LKH
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLLKHE 76
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N + ++E C AS NR C + +
Sbjct: 77 NVVN-------------LIEICRTKASPY----------------NR-----CKGSIYLV 102
Query: 283 FNFEVHKR---------PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
F+F H EI + +L GL Y+H +HRD+KA N+L+T G
Sbjct: 103 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV 162
Query: 334 VKLADFGSA-SIKCPANS-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+KLADFG A + NS V T ++ PE++L E Y +D+W G
Sbjct: 163 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAGCIMA 220
Query: 386 ELAERKP 392
E+ R P
Sbjct: 221 EMWTRSP 227
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 6 SLLRQLKHPNTIE-----------YRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEE 54
+L+ LKH N + Y C + +LV ++C + ++
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRC---KGSIYLVFDFCEHDLAGLLSNVLVKFTLS 124
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANS---- 109
EI + +L GL Y+H +HRD+KA N+L+T G +KLADFG A + NS
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 110 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
V T ++ PE++L E Y +D+W G
Sbjct: 185 YXNRVVTLWYRPPELLLG--ERDYGPPIDLWGAG 216
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV ++C + ++ EI + +L GL Y+H +HRD+KA N+L+T
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 160
Query: 676 GTVKL 680
G +KL
Sbjct: 161 GVLKL 165
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 61/250 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
FE L+ +G G+FG V YYA ++ +E++ K ++ A L E
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTEN 202
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 203 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 245
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTETG 332
+ F+E A F + ++ L+YLHS ++RD+K N++L + G
Sbjct: 246 RVFSEDRARF----------------YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 289
Query: 333 TVKLADFG--SASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+K+ DFG IK A +F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 290 HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMM 346
Query: 389 ERKPPYFNMN 398
+ P++N +
Sbjct: 347 CGRLPFYNQD 356
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ +L+ +HP + + VMEY G +R E+ + ++
Sbjct: 202 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 65 RGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFG--SASIKCPA--NSFVGTPYWMAP 119
L+YLHS + +RD+K N++L + G +K+ DFG IK A +F GTP ++AP
Sbjct: 262 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 321
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
EV +++ Y VD W LG+ + + F +D EK+FE
Sbjct: 322 EV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFE 362
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTE 674
VMEY G +R E+ + ++ L+YLHS ++RD+K N++L +
Sbjct: 228 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 287
Query: 675 TGTVKL 680
G +K+
Sbjct: 288 DGHIKI 293
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 121/323 (37%), Gaps = 51/323 (15%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPC---LQSSDWSVIKTISSTAERKPPYFNMNA 440
L P+ L +++ + S+ ++ K K P M
Sbjct: 207 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 441 MSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 267 QDSLQHPWIKPKDTQQALSSAWS 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 121/323 (37%), Gaps = 51/323 (15%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 2 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 99
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 100 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 205
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPC---LQSSDWSVIKTISSTAERKPPYFNMNA 440
L P+ L +++ + S+ ++ K K P M
Sbjct: 206 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
Query: 441 MSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 266 QDSLQHPWIKPKDTQQALSSAWS 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 185 PEIVNYEPLGL---EADMWSIGV 204
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 676 GTVK 679
K
Sbjct: 150 NVPK 153
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 61/250 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
FE L+ +G G+FG V YYA ++ +E++ K ++ A L E
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTEN 61
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 104
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTETG 332
+ F+E A F + ++ L+YLHS ++RD+K N++L + G
Sbjct: 105 RVFSEDRARF----------------YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 148
Query: 333 TVKLADFG--SASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+K+ DFG IK A F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 149 HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMM 205
Query: 389 ERKPPYFNMN 398
+ P++N +
Sbjct: 206 CGRLPFYNQD 215
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ +L+ +HP + + VMEY G +R E+ + ++
Sbjct: 61 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 65 RGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFG--SASIKCPA--NSFVGTPYWMAP 119
L+YLHS + +RD+K N++L + G +K+ DFG IK A F GTP ++AP
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
EV +++ Y VD W LG+ + + F +D EK+FE
Sbjct: 181 EV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFE 221
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTE 674
VMEY G +R E+ + ++ L+YLHS ++RD+K N++L +
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 146
Query: 675 TGTVKL 680
G +K+
Sbjct: 147 DGHIKI 152
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 139 LGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVA---IKKM 195
LG P S EI ++ K + R +G G F Y + ++E+ A + K
Sbjct: 3 LGSDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKS 62
Query: 196 SYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVH 255
L EK + EI + L +P+ + + G + D ++V+E C
Sbjct: 63 MLLKPHQKEKMS---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC----------- 108
Query: 256 WIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKR--PLKEEEIAAICSGVLRGLNYLHS 313
R + L E+HKR + E E ++G+ YLH+
Sbjct: 109 -------------RRRSL-----------LELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVILAMDEG 369
IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+ +
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC---KK 201
Query: 370 QYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQND 410
+ +VD+WSLG L KPP+ I +N+
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 242
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRG 66
+ L +P+ + + G + D ++V+E C ++E+HKR + E E ++G
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVI 122
+ YLH+ IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 198
Query: 123 LAMDEGQYDGKVDVWSLG 140
+ + +VD+WSLG
Sbjct: 199 C---KKGHSFEVDIWSLG 213
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR + E E ++G+ YLH+ IHRD+K GN+ L
Sbjct: 103 VVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
Query: 674 ETGTVKL 680
+ VK+
Sbjct: 161 DDMDVKI 167
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 43/231 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADIL-KEIRFLRQLKHPNTIEY 227
++G G FG VY + V+ VA+KK++ + E+ +EI+ + + +H N +E
Sbjct: 38 KMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
G LV Y G+ L +L C
Sbjct: 96 LGFSSDGDDLCLVYVYMPN--------------------GSLLDRLSCLD---------- 125
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----- 342
PL I G G+N+LH IHRD+K+ NILL E T K++DFG A
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
+ + VGT +MAPE + G+ K D++S G+ +E+ P
Sbjct: 186 FAQTVMXSRIVGTTAYMAPEAL----RGEITPKSDIYSFGVVLLEIITGLP 232
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------SIKCPANSFVG 112
I G G+N+LH IHRD+K+ NILL E T K++DFG A + + VG
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
T +MAPE + G+ K D++S G+
Sbjct: 198 TTAYMAPEAL----RGEITPKSDIYSFGVV 223
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I G G+N+LH IHRD+K+ NILL E T K+
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 61/250 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
FE L+ +G G+FG V YYA ++ +E++ K ++ A L E
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTEN 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 103
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTETG 332
+ F+E A F + ++ L+YLHS ++RD+K N++L + G
Sbjct: 104 RVFSEDRARF----------------YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 147
Query: 333 TVKLADFG--SASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+K+ DFG IK A F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 148 HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMM 204
Query: 389 ERKPPYFNMN 398
+ P++N +
Sbjct: 205 CGRLPFYNQD 214
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ +L+ +HP + + VMEY G +R E+ + ++
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 65 RGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFG--SASIKCPA--NSFVGTPYWMAP 119
L+YLHS + +RD+K N++L + G +K+ DFG IK A F GTP ++AP
Sbjct: 120 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
EV +++ Y VD W LG+ + + F +D EK+FE
Sbjct: 180 EV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFE 220
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTE 674
VMEY G +R E+ + ++ L+YLHS ++RD+K N++L +
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 145
Query: 675 TGTVKL 680
G +K+
Sbjct: 146 DGHIKI 151
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 121/323 (37%), Gaps = 51/323 (15%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPC---LQSSDWSVIKTISSTAERKPPYFNMNA 440
L P+ L +++ + S+ ++ K K P M
Sbjct: 207 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 441 MSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 267 QDSLQHPWIKPKDTQQALSSAWS 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRD-HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
LL+ ++H N I + LR+ + +LVM + +D+ ++ EE+I +
Sbjct: 76 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM---QTDLQKIMGLKFSEEKIQYLV 132
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+L+GL Y+HS G +HRD+K GN+ + E +K+ DFG A +V T ++ AP
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 192
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
EVIL+ Y+ VD+WS+G
Sbjct: 193 EVILSW--MHYNQTVDIWSVG 211
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 48/245 (19%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+G G++G+V A S E VAIKK+S + K A +E+ L+ ++H N I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 89
Query: 229 GCY-----LRD-HTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ LR+ + +LVM + M LQ++
Sbjct: 90 DVFTPASSLRNFYDFYLVMPF----------------------MQTDLQKIMGLK----- 122
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
EE+I + +L+GL Y+HS G +HRD+K GN+ + E +K+ DFG A
Sbjct: 123 ---------FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 343 S-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
+V T ++ APEVIL+ Y+ VD+WS+G E+ K + + +
Sbjct: 174 RHADAEMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 402 ALYHI 406
L I
Sbjct: 232 QLTQI 236
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVM + +D+ ++ EE+I + +L+GL Y+HS G +HRD+K GN+ + E
Sbjct: 106 LVMPFM---QTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 162
Query: 676 GTVKL 680
+K+
Sbjct: 163 CELKI 167
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRD-HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
LL+ ++H N I + LR+ + +LVM + +D+ ++ EE+I +
Sbjct: 94 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM---QTDLQKIMGMEFSEEKIQYLV 150
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+L+GL Y+HS G +HRD+K GN+ + E +K+ DFG A +V T ++ AP
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 210
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
EVIL+ Y+ VD+WS+G
Sbjct: 211 EVILSW--MHYNQTVDIWSVG 229
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 48/245 (19%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+G G++G+V A S E VAIKK+S + K A +E+ L+ ++H N I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 107
Query: 229 GCY-----LRD-HTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ LR+ + +LVM + +D+ ++ +E
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFM---QTDLQKIMGME------------------------ 140
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
EE+I + +L+GL Y+HS G +HRD+K GN+ + E +K+ DFG A
Sbjct: 141 ---------FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Query: 343 S-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
+V T ++ APEVIL+ Y+ VD+WS+G E+ K + + +
Sbjct: 192 RHADAEMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 402 ALYHI 406
L I
Sbjct: 250 QLTQI 254
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LVM + +D+ ++ EE+I + +L+GL Y+HS G +HRD+K GN+ + E
Sbjct: 124 LVMPFM---QTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 180
Query: 676 GTVKL 680
+K+
Sbjct: 181 CELKI 185
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 61/250 (24%)
Query: 164 FEDLREIGHGSFGAV----------YYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
FE L+ +G G+FG V YYA ++ +E++ K ++ A L E
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTEN 59
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L+ +HP + + VMEY G E FH L +
Sbjct: 60 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG----------ELFFH-------LSRE 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTETG 332
+ F+E A F + ++ L+YLHS ++RD+K N++L + G
Sbjct: 103 RVFSEDRARF----------------YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 146
Query: 333 TVKLADFG--SASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+K+ DFG IK A F GTP ++APEV +++ Y VD W LG+ E+
Sbjct: 147 HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMM 203
Query: 389 ERKPPYFNMN 398
+ P++N +
Sbjct: 204 CGRLPFYNQD 213
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ +L+ +HP + + VMEY G +R E+ + ++
Sbjct: 59 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 65 RGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFG--SASIKCPA--NSFVGTPYWMAP 119
L+YLHS + +RD+K N++L + G +K+ DFG IK A F GTP ++AP
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFE 165
EV +++ Y VD W LG+ + + F +D EK+FE
Sbjct: 179 EV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFE 219
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR-IHRDVKAGNILLTE 674
VMEY G +R E+ + ++ L+YLHS ++RD+K N++L +
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 144
Query: 675 TGTVKL 680
G +K+
Sbjct: 145 DGHIKI 150
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 45/262 (17%)
Query: 196 SYLGKQCAEKWADILKEIRFLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
S+ ++ E LKE+ LR++ HPN I+ + Y + +LV +
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD------------ 104
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
+ LF++ K L E+E I +L + LH L
Sbjct: 105 ---------------------LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI-LAMDEGQ 370
+HRD+K NILL + +KL DFG + P GTP ++APE+I +M++
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 203
Query: 371 --YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDW----SVIKT 424
Y +VD+WS G+ L PP+++ M L I + S +W +K
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ-FGSPEWDDYSDTVKD 262
Query: 425 ISSTAERKPPYFNMNAMSALYH 446
+ S P A AL H
Sbjct: 263 LVSRFLVVQPQKRYTAEEALAH 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 7 LLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVL 64
+LR++ HPN I+ + Y + +LV + G D + K L E+E I +L
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALL 134
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEV 121
+ LH L +HRD+K NILL + +KL DFG + P GTP ++APE+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 122 I-LAMDEGQ--YDGKVDVWSLGITPGSL 146
I +M++ Y +VD+WS G+ +L
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
K L E+E I +L + LH L +HRD+K NILL + +KL
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL 165
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 46/237 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKH 221
F+ R +G G FG VY AR ++ I+A+K + S L K+ E + +EI L+H
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH--QLRREIEIQSHLRH 74
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
PN + + +L++E+ G ++L
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFA--------------------PRGELYKEL-------- 106
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+ H R E+ A + L+Y H IHRD+K N+L+ G +K+ADFG
Sbjct: 107 ----QKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG- 160
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P+ GT ++ PE+I EG+ +D KVD+W G+ C E PP+
Sbjct: 161 WSVHAPSLRRRXMCGTLDYLPPEMI----EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + + +L++E+ G ++ H R E+ A + L+
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALH 129
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y H IHRD+K N+L+ G +K+ADFG S+ P+ GT ++ PE+I
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFG-WSVHAPSLRRRXMCGTLDYLPPEMI--- 185
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+W G+
Sbjct: 186 -EGKTHDEKVDLWCAGV 201
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++E+ G ++ H R E+ A + L+Y H IHRD+K N+L+
Sbjct: 92 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY 150
Query: 675 TGTVKL 680
G +K+
Sbjct: 151 KGELKI 156
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHKRPLKEEEIAAIC 60
LL+ + H N I + T +LVME + +I + L E ++ +
Sbjct: 74 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLL 130
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANSFVGTPYWM 117
+L G+ +LHS G IHRD+K NI++ T+K+ DFG +AS +V T Y+
Sbjct: 131 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYR 190
Query: 118 APEVILAMDEGQYDGKVDVWSLGITPGSL 146
APEVIL M Y VD+WS+G G L
Sbjct: 191 APEVILGMG---YKENVDIWSVGCIMGEL 216
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 100/238 (42%), Gaps = 51/238 (21%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K ++ L+ IG G+ G V A V VA+KK+S Q K A +E+ L+ +
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA--YRELVLLKCVN 79
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + T +LVME + +I + E E M L Q+
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-----ELDHERMSYLLYQML 134
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 135 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 163
Query: 335 KLADFG---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG +AS +V T Y+ APEVIL M Y VD+WS+G EL +
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGELVK 218
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ LVME + +I + L E ++ + +L G+ +LHS G
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGI 145
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 146 IHRDLKPSNIVVKSDCTLKI 165
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADIL-KEIRFLRQLKHPNTIEY 227
++G G FG VY + V+ VA+KK++ + E+ +EI+ + + +H N +E
Sbjct: 32 KMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
G LV Y G+ L +L C
Sbjct: 90 LGFSSDGDDLCLVYVYMPN--------------------GSLLDRLSCLD---------- 119
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----- 342
PL I G G+N+LH IHRD+K+ NILL E T K++DFG A
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
+ VGT +MAPE + G+ K D++S G+ +E+ P
Sbjct: 180 FAQXVMXXRIVGTTAYMAPEAL----RGEITPKSDIYSFGVVLLEIITGLP 226
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------SIKCPANSFVG 112
I G G+N+LH IHRD+K+ NILL E T K++DFG A + VG
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
T +MAPE + G+ K D++S G+
Sbjct: 192 TTAYMAPEAL----RGEITPKSDIYSFGVV 217
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I G G+N+LH IHRD+K+ NILL E T K+
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 168
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADIL-KEIRFLRQLKHPNTIEY 227
++G G FG VY + V+ VA+KK++ + E+ +EI+ + + +H N +E
Sbjct: 38 KMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
G LV Y G+ L +L C
Sbjct: 96 LGFSSDGDDLCLVYVYMPN--------------------GSLLDRLSCLD---------- 125
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----- 342
PL I G G+N+LH IHRD+K+ NILL E T K++DFG A
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
+ VGT +MAPE + G+ K D++S G+ +E+ P
Sbjct: 186 FAQTVMXXRIVGTTAYMAPEAL----RGEITPKSDIYSFGVVLLEIITGLP 232
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------SIKCPANSFVG 112
I G G+N+LH IHRD+K+ NILL E T K++DFG A + VG
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
T +MAPE + G+ K D++S G+
Sbjct: 198 TTAYMAPEAL----RGEITPKSDIYSFGVV 223
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I G G+N+LH IHRD+K+ NILL E T K+
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 46/237 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKH 221
F+ R +G G FG VY AR ++ I+A+K + S L K+ E + +EI L+H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH--QLRREIEIQSHLRH 73
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
PN + + +L++E+ G ++L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFA--------------------PRGELYKEL-------- 105
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+ H R E+ A + L+Y H IHRD+K N+L+ G +K+ADFG
Sbjct: 106 ----QKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG- 159
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P+ GT ++ PE+I EG+ +D KVD+W G+ C E PP+
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMI----EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HPN + + +L++E+ G ++ H R E+ A + L+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALH 128
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y H IHRD+K N+L+ G +K+ADFG S+ P+ GT ++ PE+I
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFG-WSVHAPSLRRRXMCGTLDYLPPEMI--- 184
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ +D KVD+W G+
Sbjct: 185 -EGKTHDEKVDLWCAGV 200
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L++E+ G ++ H R E+ A + L+Y H IHRD+K N+L+
Sbjct: 91 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY 149
Query: 675 TGTVKL 680
G +K+
Sbjct: 150 KGELKI 155
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 45/262 (17%)
Query: 196 SYLGKQCAEKWADILKEIRFLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
S+ ++ E LKE+ LR++ HPN I+ + Y + +LV +
Sbjct: 44 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD------------ 91
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
+ LF++ K L E+E I +L + LH L
Sbjct: 92 ---------------------LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVI-LAMDEGQ 370
+HRD+K NILL + +KL DFG + P GTP ++APE+I +M++
Sbjct: 131 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 190
Query: 371 --YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDW----SVIKT 424
Y +VD+WS G+ L PP+++ M L I + S +W +K
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ-FGSPEWDDYSDTVKD 249
Query: 425 ISSTAERKPPYFNMNAMSALYH 446
+ S P A AL H
Sbjct: 250 LVSRFLVVQPQKRYTAEEALAH 271
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 7 LLRQLK-HPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVL 64
+LR++ HPN I+ + Y + +LV + G D + K L E+E I +L
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALL 121
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEV 121
+ LH L +HRD+K NILL + +KL DFG + P GTP ++APE+
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 122 I-LAMDEGQ--YDGKVDVWSLGITPGSL 146
I +M++ Y +VD+WS G+ +L
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTL 209
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
K L E+E I +L + LH L +HRD+K NILL + +KL
Sbjct: 105 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL 152
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 50/266 (18%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVA---IKK 194
S + P S EI ++ K + R +G G F Y + ++E+ A + K
Sbjct: 18 SAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPK 77
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
L EK + EI + L +P+ + + G + D ++V+E C
Sbjct: 78 SMLLKPHQKEKMST---EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC---------- 124
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKR--PLKEEEIAAICSGVLRGLNYLH 312
R + L E+HKR + E E ++G+ YLH
Sbjct: 125 --------------RRRSL-----------LELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 313 SLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVILAMDE 368
+ IHRD+K GN+ L + VK+ DFG A+ I+ + GTP ++APEV+ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC---K 216
Query: 369 GQYDGKVDVWSLGITCIELAERKPPY 394
+ +VD+WSLG L KPP+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRG 66
+ L +P+ + + G + D ++V+E C ++E+HKR + E E ++G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVI 122
+ YLH+ IHRD+K GN+ L + VK+ DFG A+ I+ + GTP ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL 214
Query: 123 LAMDEGQYDGKVDVWSLG 140
+ + +VD+WSLG
Sbjct: 215 C---KKGHSFEVDIWSLG 229
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR + E E ++G+ YLH+ IHRD+K GN+ L
Sbjct: 119 VVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 674 ETGTVKL 680
+ VK+
Sbjct: 177 DDMDVKI 183
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + S +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G CI
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVG--CI 214
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + S +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + S +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + L+++G G+FG+V R + E+VA+KK+ + E D +EI L
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEIL 66
Query: 217 RQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ L+H N ++Y+G CY L+MEY GS D ++ H
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------------------ 108
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +H L + S + +G+ YL + IHR++ NIL+
Sbjct: 109 KERIDHIKLLQY---------------TSQICKGMEYLGTKRYIHRNLATRNILVENENR 153
Query: 334 VKLADFGSA----------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG +K P S + +W APE ++ E ++ DVWS G+
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPI---FWYAPE---SLTESKFSVASDVWSFGVV 207
Query: 384 CIEL 387
EL
Sbjct: 208 LYEL 211
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRG-CY-LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L+H N ++Y+G CY L+MEY GS D ++ HK + ++ S +
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----------SIKCPANSFVGT 113
+G+ YL + IHR++ NIL+ VK+ DFG +K P S +
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI-- 182
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ E ++ DVWS G+
Sbjct: 183 -FWYAPE---SLTESKFSVASDVWSFGVV 207
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+MEY GS D ++ HK + ++ S + +G+ YL + IHR++ NIL+
Sbjct: 90 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVE 149
Query: 674 ETGTVKL 680
VK+
Sbjct: 150 NENRVKI 156
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ ++ IG G+FG V R S+++ A+K +S A +E + P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ + D ++VMEY G D++ + +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGG--DLVNL---------------------------MS 167
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG--- 340
N++V ++ K + V+ L+ +HS+G IHRDVK N+LL + G +KLADFG
Sbjct: 168 NYDVPEKWAK-----FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM 222
Query: 341 ----SASIKCPANSFVGTPYWMAPEVILAM-DEGQYDGKVDVWSLGITCIELAERKPPYF 395
+ + C ++ VGTP +++PEV+ + +G Y + D WS+G+ E+ P++
Sbjct: 223 KMDETGMVHC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 13/137 (9%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHS 72
P ++ + D ++VMEY G D++ + E+ A + V+ L+ +HS
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFG-------SASIKCPANSFVGTPYWMAPEVILAM 125
+G IHRDVK N+LL + G +KLADFG + + C ++ VGTP +++PEV+ +
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC--DTAVGTPDYISPEVLKSQ 250
Query: 126 -DEGQYDGKVDVWSLGI 141
+G Y + D WS+G+
Sbjct: 251 GGDGYYGRECDWWSVGV 267
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G D++ + E+ A + V+ L+ +HS+G IHRDVK N+LL +
Sbjct: 152 MVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK 209
Query: 675 TGTVKL 680
G +KL
Sbjct: 210 HGHLKL 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 100/249 (40%), Gaps = 57/249 (22%)
Query: 165 EDL---REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKW-----ADILKEIRFL 216
EDL +IG G+FG V+ R +VA+K C E A L+E R L
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKS-------CRETLPPDLKAKFLQEARIL 166
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+Q HPN + G + ++VME G D + EG R++ L
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGG--DFLTF------LRTEGARLRVKTL--- 215
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ G+ YL S IHRD+ A N L+TE +K+
Sbjct: 216 ---------------------LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI 254
Query: 337 ADFGSA-----SIKCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAE 389
+DFG + + + P W APE A++ G+Y + DVWS GI E +
Sbjct: 255 SDFGMSREEADGVXAASGGLRQVPVKWTAPE---ALNYGRYSSESDVWSFGILLWETFSL 311
Query: 390 RKPPYFNMN 398
PY N++
Sbjct: 312 GASPYPNLS 320
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS-DIIEVHKRPLKEEEIAAICSGV 63
+ +L+Q HPN + G + ++VME G + L+ + + +
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-----SIKCPANSFVGTPY-WM 117
G+ YL S IHRD+ A N L+TE +K++DFG + + + P W
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE A++ G+Y + DVWS GI
Sbjct: 283 APE---ALNYGRYSSESDVWSFGI 303
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 651 GLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G+ YL S IHRD+ A N L+TE +K+
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKI 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A FV T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A FV T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE AG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAG 181
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A FV T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A FV T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE AG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAG 181
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 15 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 72
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 73 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 116 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A FV T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 163 LDFGLARHTDDEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 212
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 127
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A FV T ++ AP
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 188 EIML--NWMHYNQTVDIWSVGCIMAEL 212
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE AG
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMAG 177
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 121/324 (37%), Gaps = 53/324 (16%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L+ E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAER----KPPYFNMN 439
L P+ L +++ + + +S ++ R K P M
Sbjct: 207 TYILLSGASPFLGDTKQETLANVSAVNYE-FEDEYFSNTSALAKDFIRRLLVKDPKKRMT 265
Query: 440 AMSALYH--IAQNDTPCLQSSDWS 461
+L H I DT SS WS
Sbjct: 266 IQDSLQHPWIKPKDTQQALSSAWS 289
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L+ E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 679
K L EEE +L G+ YLHSL H D+K NI+L + K
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVA---IKK 194
S + P S EI ++ K + R +G G F Y + ++E+ A + K
Sbjct: 18 SAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPK 77
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
L EK + EI + L +P+ + + G + D ++V+E C
Sbjct: 78 SMLLKPHQKEKMS---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC---------- 124
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKR--PLKEEEIAAICSGVLRGLNYLH 312
R + L E+HKR + E E ++G+ YLH
Sbjct: 125 --------------RRRSL-----------LELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 313 SLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVILAMDE 368
+ IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC---K 216
Query: 369 GQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQND 410
+ +VD+WSLG L KPP+ I +N+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRG 66
+ L +P+ + + G + D ++V+E C ++E+HKR + E E ++G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVI 122
+ YLH+ IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 214
Query: 123 LAMDEGQYDGKVDVWSLG 140
+ + +VD+WSLG
Sbjct: 215 C---KKGHSFEVDIWSLG 229
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR + E E ++G+ YLH+ IHRD+K GN+ L
Sbjct: 119 VVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 674 ETGTVKL 680
+ VK+
Sbjct: 177 DDMDVKI 183
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+KH N I + A + E + + H+ G
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHLMG------------ 110
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
A N V + L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 111 ---ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKIL 167
Query: 338 DFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 168 DFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ +KH N I + L + ++ + +G+ + I V + L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIY 132
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPE 120
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ APE
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 121 VILAMDEGQYDGKVDVWSLG 140
++L + Y+ VD+WS+G
Sbjct: 193 IML--NWMHYNQTVDIWSVG 210
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 612 FSPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
F+ ++ + +G+ + I V + L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 672 LTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 158 VNEDXELKILDFGLARHTDDEMTG 181
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVA---IKK 194
S + P S EI ++ K + R +G G F Y + ++E+ A + K
Sbjct: 18 SAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPK 77
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
L EK + EI + L +P+ + + G + D ++V+E C
Sbjct: 78 SMLLKPHQKEKMST---EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC---------- 124
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKR--PLKEEEIAAICSGVLRGLNYLH 312
R + L E+HKR + E E ++G+ YLH
Sbjct: 125 --------------RRRSL-----------LELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 313 SLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVILAMDE 368
+ IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC---K 216
Query: 369 GQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQND 410
+ +VD+WSLG L KPP+ I +N+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRG 66
+ L +P+ + + G + D ++V+E C ++E+HKR + E E ++G
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPA---NSFVGTPYWMAPEVI 122
+ YLH+ IHRD+K GN+ L + VK+ DFG A+ I+ GTP ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL 214
Query: 123 LAMDEGQYDGKVDVWSLG 140
+ + +VD+WSLG
Sbjct: 215 C---KKGHSFEVDIWSLG 229
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR + E E ++G+ YLH+ IHRD+K GN+ L
Sbjct: 119 VVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 674 ETGTVKL 680
+ VK+
Sbjct: 177 DDMDVKI 183
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKE-IRFLRQLKHPNTIEY 227
EIG GSF VY + L + V + ++ + KE L+ L+HPN + +
Sbjct: 33 EIGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
+ +W E + I+ V E G LK + + F + +V
Sbjct: 91 -------YDSW---ESTVKGKKCIVLVT----ELXTSGT------LKTYLKRFKVXKIKV 130
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLT-ETGTVKLADFGSASI 344
+ + C +L+GL +LH+ IHRD+K NI +T TG+VK+ D G A++
Sbjct: 131 ---------LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 345 K--CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSA 402
K A + +GTP + APE E +YD VDV++ G +E A + PY +
Sbjct: 182 KRASFAKAVIGTPEFXAPEXY----EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
Query: 403 LYH 405
+Y
Sbjct: 238 IYR 240
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 33/152 (21%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAW-----------LVMEYCLGSASDIIEVHKRPLKEEEI 56
L+ L+HPN + + + +W LV E S ++ + + K +I
Sbjct: 79 LKGLQHPNIVRF-------YDSWESTVKGKKCIVLVTEL---XTSGTLKTYLKRFKVXKI 128
Query: 57 AAI---CSGVLRGLNYLHSLGR--IHRDVKAGNILLT-ETGTVKLADFGSASIK--CPAN 108
+ C +L+GL +LH+ IHRD+K NI +T TG+VK+ D G A++K A
Sbjct: 129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ +GTP + APE E +YD VDV++ G
Sbjct: 189 AVIGTPEFXAPEXY----EEKYDESVDVYAFG 216
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 645 CSGVLRGLNYLHSLGR--IHRDVKAGNILLT-ETGTVKL 680
C +L+GL +LH+ IHRD+K NI +T TG+VK+
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI 173
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 100/249 (40%), Gaps = 57/249 (22%)
Query: 165 EDL---REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKW-----ADILKEIRFL 216
EDL +IG G+FG V+ R +VA+K C E A L+E R L
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKS-------CRETLPPDLKAKFLQEARIL 166
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+Q HPN + G + ++VME G D + EG R++ L
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGG--DFLTF------LRTEGARLRVKTL--- 215
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ G+ YL S IHRD+ A N L+TE +K+
Sbjct: 216 ---------------------LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI 254
Query: 337 ADFGSA-----SIKCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAE 389
+DFG + + + P W APE A++ G+Y + DVWS GI E +
Sbjct: 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPE---ALNYGRYSSESDVWSFGILLWETFSL 311
Query: 390 RKPPYFNMN 398
PY N++
Sbjct: 312 GASPYPNLS 320
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSAS-DIIEVHKRPLKEEEIAAICSGV 63
+ +L+Q HPN + G + ++VME G + L+ + + +
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-----SIKCPANSFVGTPY-WM 117
G+ YL S IHRD+ A N L+TE +K++DFG + + + P W
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE A++ G+Y + DVWS GI
Sbjct: 283 APE---ALNYGRYSSESDVWSFGI 303
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 651 GLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G+ YL S IHRD+ A N L+TE +K+
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKI 254
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 46/264 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYAR---CLVSREIVAIKKMSYLGKQCAEKWADIL 210
+F +E+ + ++ E+G G F V R + IKK + DI
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
+E+ L++++HPN I Y L++E G
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGE---------------------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
LF+F K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 101 -----------LFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 331 TGT----VKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+K+ DFG A N F GTP ++APE++ G + D+WS+G+
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVI 206
Query: 384 CIELAERKPPYFNMNAMSALYHIA 407
L P+ L +++
Sbjct: 207 TYILLSGASPFLGDTKQETLANVS 230
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++++HPN I Y L++E G K L EEE +L
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G+ YLHSL H D+K NI+L + +K+ DFG A N F GTP ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 186 PEIVNYEPLGL---EADMWSIGV 205
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L++E G K L EEE +L G+ YLHSL H D+K NI+L +
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 676 GTVK 679
K
Sbjct: 151 NVPK 154
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L IG G++G+V A + VA+KK+S + +E+R L+
Sbjct: 24 EVPER-YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 81
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 82 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 124
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 125 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 221
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 136
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 197 EIML--NWMHYNQTVDIWSVG 215
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 162 AVNEDXELKILDFGLARHTDDEMTG 186
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 123/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + ++ A D ++E + +L HP ++
Sbjct: 12 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 67 LYGVCLEQAPICLVFE---------------------------------FMEHGCLSDYL 93
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 94 RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 207
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I +
Sbjct: 208 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNH--------- 239
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
C + P DRP+ RLL
Sbjct: 240 -----------CWKERPEDRPAFSRLL 255
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 53 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 113 CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 173 PEVF---SFSRYSSKSDVWSFGV 192
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E+ G SD + + E + +C V G+ YL IHRD+ A N L+ E
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGE 138
Query: 675 TGTVKL 680
+K+
Sbjct: 139 NQVIKV 144
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S Q +E+R L+
Sbjct: 25 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 83 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 125
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 126 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 137
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 198 EIML--NWMHYNQTVDIWSVG 216
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 163 AVNEDSELKILDFGLARHTDDEMTG 187
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 21 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 78
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 79 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 121
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 122 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 218
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 194 EIML--NWMHYNQTVDIWSVG 212
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 159 AVNEDSELKILDFGLARHTDDEMTG 183
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S Q +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NAMHYNQTVDIWSVGCIMAEL 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NAMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQL- 219
F L +G GSFG V A + E+ AIK L K + D+ + E R L L
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIK---ILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
K P + C+ + VMEY G D++ +H++ +G
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGG--DLM--------YHIQQVGK----------- 116
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
KE + + + GL +LH G I+RD+K N++L G +K+ADF
Sbjct: 117 ------------FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADF 164
Query: 340 GSASIK----CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G F GTP ++APE+I G+ VD W+ G+ E+ +PP+
Sbjct: 165 GMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK---SVDWWAYGVLLYEMLAGQPPF 220
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
K P + C+ + VMEY G I +V K KE + + + GL +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFF 135
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK----CPANSFVGTPYWMAPEVILAM 125
LH G I+RD+K N++L G +K+ADFG F GTP ++APE+I
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 126 DEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV 185
G+ VD W+ G+ + + FD ED +++F+ + E V Y + L
Sbjct: 196 PYGK---SVDWWAYGVLLYEMLAGQPP--FDGEDEDELFQSIME------HNVSYPKSL- 243
Query: 186 SREIVAIKK 194
S+E V+I K
Sbjct: 244 SKEAVSICK 252
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
VMEY G I +V K KE + + + GL +LH G I+RD+K N++L
Sbjct: 97 FVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 674 ETGTVKL 680
G +K+
Sbjct: 155 SEGHIKI 161
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 25 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 83 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 125
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 126 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 137
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 198 EIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 47/244 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE ++ +G G FG V+ A+ V AIK++ ++ A + +++E++ L +L+HP
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALAKLEHPG 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ Y +L +T E S+ + +++ R + LK +
Sbjct: 65 IVRYFNAWLEKNTT----EKLQPSSPKVY--------LYIQMQLCRKENLKDW------- 105
Query: 284 NFEVHKRPLKEEEIAAICSGVL----RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
++ R EE ++C + + +LHS G +HRD+K NI T VK+ DF
Sbjct: 106 ---MNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162
Query: 340 G----------SASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
G ++ P ++ VGT +M+PE I Y KVD++SLG+
Sbjct: 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG---NSYSHKVDIFSLGLI 219
Query: 384 CIEL 387
EL
Sbjct: 220 LFEL 223
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Query: 8 LRQLKHPNTIEYRGCYLRDHT----------AWLVMEYCLGSASDIIE-VHKRPLKEEEI 56
L +L+HP + Y +L +T +L ++ L ++ + ++ R EE
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 57 AAICSGVL----RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SAS 102
++C + + +LHS G +HRD+K NI T VK+ DFG +
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 103 IKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDP 149
+ P ++ VGT +M+PE I Y KVD++SLG+ L P
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHG---NSYSHKVDIFSLGLILFELLYP 226
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 638 EEEIAAICSGVL----RGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
EE ++C + + +LHS G +HRD+K NI T VK+
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 159
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 69 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN-----SFVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + + GTP ++A
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 186 PEV---LSKKGHSFEVDVWSIG 204
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 81
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 82 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 106
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 165
Query: 345 KCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 166 KVEYDGERKKTLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 217
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 218 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 255
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 94 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 674 ETGTVKL 680
E VK+
Sbjct: 152 EDLEVKI 158
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 138/354 (38%), Gaps = 72/354 (20%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILK 211
D ++FE E+G G+F V RC+ + +I+ KK+S Q E+
Sbjct: 4 DEYQLFE---ELGKGAFSVV--RRCMKIPTGQEYAAKIINTKKLSARDHQKLER------ 52
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E R R LKHPN + + +LV + G
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE----------------------- 89
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--- 328
LF V + E + + +L +N+ H G +HRD+K N+LL
Sbjct: 90 ----------LFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 329 TETGTVKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
++ VKLADFG A I+ + F GTP +++PEV + + Y VD+W+ G+
Sbjct: 140 SKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEV---LRKDPYGKPVDMWACGVI 195
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMN 439
L PP+++ + LY + S +W + K + + P +
Sbjct: 196 LYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 254
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
A AL H C +S+ S CL K A R G +LT L TR
Sbjct: 255 ASEALKH----PWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATR 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKHPN + + +LV + G DI+ R E A+ C
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQ 110
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSASIKCPANS-----FVGT 113
+L +N+ H G +HRD+K N+LL ++ VKLADFG A I+ + F GT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGT 169
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 170 PGYLSPEV---LRKDPYGKPVDMWACGV 194
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 38 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 95
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 96 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 138
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 139 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 235
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 150
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 211 EIML--NWMHYNQTVDIWSVG 229
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 118 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 176 AVNEDCELKILDFGLARHTDDEMTG 200
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 69 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN-----SFVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + + GTP ++A
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIA 185
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 186 PEV---LSKKGHSFEVDVWSIG 204
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 81
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 82 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 106
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 165
Query: 345 KCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 166 KVEYDGERKKTLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 217
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 218 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 255
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 94 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 674 ETGTVKL 680
E VK+
Sbjct: 152 EDLEVKI 158
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 73 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN-----SFVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + + GTP ++A
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIA 189
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 190 PEV---LSKKGHSFEVDVWSIG 208
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 85
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 86 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 110
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 169
Query: 345 KCPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 170 KVEYDGERKKTLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 221
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 222 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 259
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 98 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 674 ETGTVKL 680
E VK+
Sbjct: 156 EDLEVKI 162
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 39 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 96
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 97 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 139
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 140 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 236
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 151
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 212 EIML--NWMHYNQTVDIWSVG 230
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 177 AVNEDCELKILDFGLARHTDDEMTG 201
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+KH N I + A + E + + H+ G
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHLMG------------ 110
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
A N V + L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 111 ---ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 167
Query: 338 DFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 168 DFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ +KH N I + L + ++ + +G+ + I V + L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIY 132
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPE 120
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ APE
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 121 VILAMDEGQYDGKVDVWSLG 140
++L + Y+ VD+WS+G
Sbjct: 193 IML--NWMHYNQTVDIWSVG 210
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 612 FSPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
F+ ++ + +G+ + I V + L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 672 LTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTG 181
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 15 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 72
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 73 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 116 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 212
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 127
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 188 EIML--NWMHYNQTVDIWSVG 206
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMTG 177
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 23/156 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLR--DHTAWLVMEYCLGSASDIIEVH------KRP--LKEEE 55
+LLR+LKHPN I + +L D WL+ +Y II+ H K+P L
Sbjct: 70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT----ETGTVKLADFGSASI-------K 104
+ ++ +L G++YLH+ +HRD+K NIL+ E G VK+AD G A +
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 105 CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V T ++ APE++L Y +D+W++G
Sbjct: 190 ADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIG 223
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 52/255 (20%)
Query: 156 DKEDPEKIFE-DLREIGHGSFGAVYYARCLVSREI--VAIKKMSYLGKQCAEKWADILKE 212
++E E +FE + ++G G++G VY A+ ++ A+K++ G + +E
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA-----CRE 68
Query: 213 IRFLRQLKHPNTIEYRGCYLR--DHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
I LR+LKHPN I + +L D WL+ +Y II+ FH N
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK-------FHRASKAN-- 119
Query: 271 QQLKCFTEHFALFNFEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 328
K+P L + ++ +L G++YLH+ +HRD+K NIL+
Sbjct: 120 ------------------KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
Query: 329 T----ETGTVKLADFGSASI-------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDV 377
E G VK+AD G A + + V T ++ APE++L Y +D+
Sbjct: 162 MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDI 219
Query: 378 WSLGITCIELAERKP 392
W++G EL +P
Sbjct: 220 WAIGCIFAELLTSEP 234
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 616 LVMEYCLGSASDIIEVH------KRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 667
L+ +Y II+ H K+P L + ++ +L G++YLH+ +HRD+K
Sbjct: 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP 156
Query: 668 GNILLT----ETGTVKL 680
NIL+ E G VK+
Sbjct: 157 ANILVMGEGPERGRVKI 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 29 EVPER-YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 86
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 87 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 129
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 130 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 177 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 226
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 84 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 141
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 201
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 202 EIML--NWMHYNQTVDIWSVGCIMAEL 226
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 109 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 166
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 167 AVNEDCELKILDFGLARHTDDEMTG 191
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 86
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 141
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 142 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 171 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDLWSVGCIMGEMVC 225
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
K + + + I Q TPC + + T+ + E +P Y
Sbjct: 226 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 109 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 165
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 166 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDLWSVGCIM 220
Query: 144 GSL 146
G +
Sbjct: 221 GEM 223
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 152
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 153 IHRDLKPSNIVVKSDCTLKI 172
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 75
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 130
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 131 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+
Sbjct: 160 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDLWSVGCIMGEMVC 214
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
K + + + I Q TPC + + T+ + E +P Y
Sbjct: 215 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 260
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 98 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 154
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 155 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDLWSVGCIM 209
Query: 144 GSL 146
G +
Sbjct: 210 GEM 212
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 142 IHRDLKPSNIVVKSDCTLKI 161
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMXGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 24 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 81
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 82 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 124
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 125 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 221
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 136
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 197 EIML--NWMHYNQTVDIWSVG 215
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 162 AVNEDXELKILDFGLARHTDDEMTG 186
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 123/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + ++ A D ++E + +L HP ++
Sbjct: 12 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 67 LYGVCLEQAPICLVFE---------------------------------FMEHGCLSDYL 93
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 94 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 207
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I +
Sbjct: 208 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNH--------- 239
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
C + P DRP+ RLL
Sbjct: 240 -----------CWKERPEDRPAFSRLL 255
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 53 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 113 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 173 PEVF---SFSRYSSKSDVWSFGV 192
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E+ G SD + + E + +C V G+ YL IHRD+ A N L+ E
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 138
Query: 675 TGTVKL 680
+K+
Sbjct: 139 NQVIKV 144
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 46/254 (18%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ + ++G G++G VY A V+ E VAIK++ L + ++E+ L++L+H N
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
IE + +H L+ EY LK + +
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAE-------------------------NDLKKYMDK---- 125
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-----TETGTVKLAD 338
N +V R +K + ++ G+N+ HS +HRD+K N+LL +ET +K+ D
Sbjct: 126 NPDVSMRVIK-----SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180
Query: 339 FGSA-SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
FG A + P F + T ++ PE++L Y VD+WS+ E+ + P +
Sbjct: 181 FGLARAFGIPIRQFTHEIITLWYRPPEILLG--SRHYSTSVDIWSIACIWAEMLMKTPLF 238
Query: 395 FNMNAMSALYHIAQ 408
+ + L+ I +
Sbjct: 239 PGDSEIDQLFKIFE 252
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVL 64
SLL++L+H N IE + +H L+ EY ++ K P + I + ++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMD--KNPDVSMRVIKSFLYQLI 142
Query: 65 RGLNYLHSLGRIHRDVKAGNILL-----TETGTVKLADFGSA-SIKCPANSF---VGTPY 115
G+N+ HS +HRD+K N+LL +ET +K+ DFG A + P F + T +
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI--------TPGSLKDPEIAELFDKEDPEKIFEDL 167
+ PE++L Y VD+WS+ TP D EI +LF KIFE L
Sbjct: 203 YRPPEILLG--SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF------KIFEVL 254
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 641 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
I + ++ G+N+ HS +HRD+K N+LL+
Sbjct: 134 IKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+ +
Sbjct: 166 KILDFGLA--RTAGTSFMMTPEVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIK 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ + + I Q TPC + + T+ + E +P Y
Sbjct: 221 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 266
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMTPEVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 30 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 87
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 88 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 130
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 131 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 227
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 142
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 203 EIML--NWMHYNQTVDIWSVG 221
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 110 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 168 AVNEDXELKILDFGLARHTDDEMTG 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+KH N I + A + E + + H+ G
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHLMG------------ 110
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
A N V + L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 111 ---ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKIL 167
Query: 338 DFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 168 DFGLCRHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL+ +KH N I + L + ++ + +G+ + I V + L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKSQKLTDDHVQFLIY 132
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAPE 120
+LRGL Y+HS IHRD+K N+ + E +K+ DFG +V T ++ APE
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPE 192
Query: 121 VILAMDEGQYDGKVDVWSLG 140
++L + Y+ VD+WS+G
Sbjct: 193 IML--NWMHYNQTVDIWSVG 210
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 612 FSPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
F+ ++ + +G+ + I V + L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNI-VKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 672 LTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 158 VNEDSELKILDFGLCRHTDDEMTG 181
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 124/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + ++ A D ++E + +L HP ++
Sbjct: 10 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 65 LYGVCLEQAPICLVFE---------------------------------FMEHGCLSDYL 91
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 92 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 151
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 152 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 205
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I
Sbjct: 206 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQI------------ 234
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
++ C + P DRP+ RLL
Sbjct: 235 --------MNHCWKERPEDRPAFSRLL 253
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 51 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 110
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 170
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 171 PEVF---SFSRYSSKSDVWSFGV 190
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E+ G SD + + E + +C V G+ YL IHRD+ A N L+ E
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 136
Query: 675 TGTVKL 680
+K+
Sbjct: 137 NQVIKV 142
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 26 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 83
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 84 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 126
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 127 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 337 ADFGSASIKC-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 138
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 199 EIML--NWMHYNQTVDIWSVG 217
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 25 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 83 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 125
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 126 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 137
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 198 EIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 26 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 83
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 84 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 126
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 127 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 337 ADFGSASIKC-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 138
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 199 EIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 67 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS-----FVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + GTP ++A
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIA 183
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 184 PEV---LSKKGHSFEVDVWSIG 202
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 114/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 79
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 80 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 104
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 163
Query: 345 KCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 164 KVEYDGERKKVLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 215
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 216 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 253
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 92 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 674 ETGTVKL 680
E VK+
Sbjct: 150 EDLEVKI 156
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ ++ L +G G++G+V + + S +A+KK+S + +E+R L+
Sbjct: 48 EVPER-YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHA-KRTYRELRLLK 105
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A+ + E + + H+ MG L + KC
Sbjct: 106 HMKHENVIGLLDVF--------------TPATSLEEFNDVYLVTHL--MGADLNNIVKC- 148
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 149 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 195
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 196 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNMTVDIWSVGCIMAEL 245
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 160
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 220
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 221 EIML--NWMHYNMTVDIWSVG 239
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 128 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 185
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 186 AVNEDCELKILDFGLARHTDDEMTG 210
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 91 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS-----FVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + GTP ++A
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIA 207
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 208 PEV---LSKKGHSFEVDVWSIG 226
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 114/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 103
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 104 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 128
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 187
Query: 345 KCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 188 KVEYDGERKKVLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 239
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 240 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 116 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 674 ETGTVKL 680
E VK+
Sbjct: 174 EDLEVKI 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 25 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 82
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 83 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 125
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 126 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 222
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 137
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 198 EIML--NWMHYNQTVDIWSVG 216
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 26 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 83
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 84 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 126
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 127 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 337 ADFGSASIKC-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 138
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-PANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 199 EIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 123/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + K+ + D ++E + +L HP ++
Sbjct: 32 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----KEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 87 LYGVCLEQAPICLVFE---------------------------------FMEHGCLSDYL 113
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 114 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 173
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 174 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 227
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I +
Sbjct: 228 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNH--------- 259
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
C + P DRP+ RLL
Sbjct: 260 -----------CWKERPEDRPAFSRLL 275
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 73 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 192
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 193 PEVF---SFSRYSSKSDVWSFGV 212
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E+ G SD + + E + +C V G+ YL IHRD+ A N L+ E
Sbjct: 99 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 158
Query: 675 TGTVKL 680
+K+
Sbjct: 159 NQVIKV 164
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGV 63
S+ R L H + + + G + + ++V+E C ++E+HKR L E E +
Sbjct: 93 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS-----FVGTPYWMA 118
+ G YLH IHRD+K GN+ L E VK+ DFG A+ K + GTP ++A
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIA 209
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PEV + + + +VDVWS+G
Sbjct: 210 PEV---LSKKGHSFEVDVWSIG 228
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 114/292 (39%), Gaps = 71/292 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVA---IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
+G G F + ++E+ A + K L EK + EI R L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 105
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + + ++V+E C R + L E
Sbjct: 106 FHGFFEDNDFVFVVLELC------------------------RRRSL-----------LE 130
Query: 287 VHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+HKR L E E ++ G YLH IHRD+K GN+ L E VK+ DFG A+
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 189
Query: 345 KCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
K + GTP ++APEV + + + +VDVWS+G L KPP+
Sbjct: 190 KVEYDGERKKVLCGTPNYIAPEV---LSKKGHSFEVDVWSIGCIMYTLLVGKPPF----- 241
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+T CL+ + + K S P + N A S + + Q D
Sbjct: 242 ----------ETSCLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTD 279
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+E C ++E+HKR L E E ++ G YLH IHRD+K GN+ L
Sbjct: 118 VVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 674 ETGTVKL 680
E VK+
Sbjct: 176 EDLEVKI 182
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 24 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 81
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 82 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 124
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 125 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 221
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 136
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 197 EIML--NWMHYNQTVDIWSVG 215
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 162 AVNEDCELKILDFGLARHTDDEMTG 186
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 16 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 73
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 74 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 116
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 117 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 213
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 128
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 189 EIML--NWMHYNQTVDIWSVG 207
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 154 AVNEDCELKILDFGLARHTDDEMTG 178
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 16 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 73
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 74 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 116
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 117 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 213
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 128
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 189 EIML--NWMHYNQTVDIWSVG 207
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 154 AVNEDCELKILDFGLARHTDDEMTG 178
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 26 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 83
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 84 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 126
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 127 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 174 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 138
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 198
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 199 EIML--NWMHYNQTVDIWSVGCIMAEL 223
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 164 AVNEDCELKILDFGLARHTDDEMTG 188
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 17 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 74
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 75 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 117
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 118 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 165 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 214
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 129
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 189
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 190 EIML--NWMHYNQTVDIWSVG 208
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 97 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 154
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 155 AVNEDCELKILDFGLARHTDDEMTG 179
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S Q +E+R L+
Sbjct: 39 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLK 96
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 97 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 139
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 140 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 236
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 151
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 212 EIML--NWMHYNQTVDIWSVG 230
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 177 AVNEDCELKILDFGLARHTDDEMTG 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 21 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 78
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 79 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 121
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 122 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 194 EIML--NWMHYNQTVDIWSVG 212
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 159 AVNEDCELKILDFGLARHTDDEMTG 183
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 31 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA-KRTYRELRLLK 88
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 89 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 131
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 132 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 228
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 143
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 204 EIML--NWMHYNQTVDIWSVG 222
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 31 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 88
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 89 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 131
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 132 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 228
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 143
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 204 EIML--NWMHYNQTVDIWSVG 222
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 31 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 88
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 89 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 131
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 132 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 228
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 143
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 204 EIML--NWMHYNQTVDIWSVG 222
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 38 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 95
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 96 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 138
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 139 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 235
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 150
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 211 EIML--NWMHYNQTVDIWSVG 229
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 118 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 176 AVNEDCELKILDFGLARHTDDEMTG 200
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 15 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 72
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 73 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 116 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 212
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 127
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 188 EIML--NWMHYNQTVDIWSVG 206
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMTG 177
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 124/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + ++ A D ++E + +L HP ++
Sbjct: 15 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 70 LYGVCLEQAPICLVFE---------------------------------FMEHGCLSDYL 96
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 97 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 157 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 210
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I
Sbjct: 211 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQI------------ 239
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
++ C + P DRP+ RLL
Sbjct: 240 --------MNHCWRERPEDRPAFSRLL 258
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 56 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 115
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 175
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 176 PEVF---SFSRYSSKSDVWSFGV 195
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E+ G SD + + E + +C V G+ YL IHRD+ A N L+ E
Sbjct: 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141
Query: 675 TGTVKL 680
+K+
Sbjct: 142 NQVIKV 147
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 42 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 99
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 100 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 142
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 143 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 190 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 154
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 214
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 215 EIML--NWMHYNQTVDIWSVG 233
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 122 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 180 AVNEDCELKILDFGLARHTDDEMTG 204
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 24 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 81
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 82 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 124
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 125 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 221
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 136
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 197 EIML--NWMHYNQTVDIWSVGCIMAEL 221
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 162 AVNEDCELKILDFGLARHTDDEMTG 186
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 21 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 78
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 79 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 121
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 122 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 194 EIML--NWMHYNQTVDIWSVG 212
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 159 AVNEDCELKILDFGLARHTDDEMTG 183
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 82
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 137
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 138 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+ +
Sbjct: 167 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIK 221
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ + + I Q TPC + + T+ + E +P Y
Sbjct: 222 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 267
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 105 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 162 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 216
Query: 144 GSL 146
G +
Sbjct: 217 GEM 219
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 149 IHRDLKPSNIVVKSDCTLKI 168
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 18 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 75
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 76 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 118
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 119 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 166 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 215
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 73 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 130
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 190
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 191 EIML--NWMHYNQTVDIWSVGCIMAEL 215
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 98 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 155
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 156 AVNEDCELKILDFGLARHTDDEMTG 180
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 21 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 78
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 79 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 121
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 122 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 194 EIML--NWMHYNQTVDIWSVG 212
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 671 LLTETGTVKL 680
+ E +K+
Sbjct: 159 AVNEDCELKI 168
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 57/236 (24%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G CI
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVG--CI 214
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G E+ +
Sbjct: 166 KILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIK 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ + + I Q TPC + + T+ + E +P Y
Sbjct: 221 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 266
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ TP Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 30 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 87
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 88 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 130
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 131 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 227
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 142
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 203 EIML--NWMHYNQTVDIWSVG 221
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 110 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 168 AVNEDCELKILDFGLARHTDDEMTG 192
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 56/269 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G++G V A + EIVAIKK+ K L+EI+ L+ KH N I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFKHENIITIFN 76
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
D S + EV+ I+ E M L ++ +
Sbjct: 77 IQRPD------------SFENFNEVYIIQ-----ELMQTDLHRV-------------IST 106
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KC 346
+ L ++ I LR + LH IHRD+K N+L+ +K+ DFG A I
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 347 PANS-----------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
NS FV T ++ APEV+L +Y +DVWS G EL R+P +
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLT--SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 396 NMNAMSALYHI--------AQNDTPCLQS 416
+ L I + ND C++S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 31/168 (18%)
Query: 7 LLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
+L+ KH N I D + +++ E +I L ++ I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIY 119
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---KCPANS--------- 109
LR + LH IHRD+K N+L+ +K+ DFG A I NS
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 110 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELF 155
FV T ++ APEV+L +Y +DVWS G +AELF
Sbjct: 180 VEFVATRWYRAPEVMLT--SAKYSRAMDVWSCGCI--------LAELF 217
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L ++ I LR + LH IHRD+K N+L+ +K+
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 15 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 72
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 73 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 116 -------------AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 212
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLI 127
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 188 EIML--NWMHYNQTVDIWSVG 206
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL-------DTPDEQAG 688
L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+ T DE G
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 42 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 99
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 100 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 142
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 143 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 190 LDFGLARHTDDEMXGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 239
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 154
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A +V T ++ AP
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAP 214
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 215 EIML--NWMHYNQTVDIWSVG 233
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 122 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
Query: 671 LLTETGTVKL 680
+ E +K+
Sbjct: 180 AVNEDCELKI 189
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 95/242 (39%), Gaps = 52/242 (21%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
IG G G V Y R V R++ VAIK K Y +Q D L E + Q HPN
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR----DFLSEASIMGQFDHPNI 112
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G R A +V EY + D L+ F +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTF--------------------LRTHDGQFTIM- 151
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + GV G+ YL LG +HRD+ A N+L+ K++DFG + +
Sbjct: 152 -----------QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 345 --KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFN 396
P ++ T W APE I + DVWS G+ E LA + PY+N
Sbjct: 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFR---TFSSASDVWSFGVVMWEVLAYGERPYWN 257
Query: 397 MN 398
M
Sbjct: 258 MT 259
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G R A +V EY GS + H ++ + GV
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL LG +HRD+ A N+L+ K++DFG + + P ++ T W
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I + DVWS G+
Sbjct: 221 TAPEAIAFR---TFSSASDVWSFGVV 243
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+V EY GS + H ++ + GV G+ YL LG +HRD+ A N+L+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQLK 220
FE +R +G GSFG V AR + ++ A+K L K + D+ + E R L +
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVK---VLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 221 -HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
HP + C+ + VME+ G D++ FH+ Q+ + F E
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNG--GDLM--------FHI-------QKSRRFDEA 124
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
A F + ++ L +LH G I+RD+K N+LL G KLADF
Sbjct: 125 RARF----------------YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF 168
Query: 340 GSAS----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G +F GTP ++APE++ M Y VD W++G+ E+ P+
Sbjct: 169 GMCKEGICNGVTTATFCGTPDYIAPEILQEM---LYGPAVDWWAMGVLLYEMLCGHAPF 224
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHS 72
HP + C+ + VME+ G R E + ++ L +LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 73 LGRIHRDVKAGNILLTETGTVKLADFGSAS----IKCPANSFVGTPYWMAPEVILAMDEG 128
G I+RD+K N+LL G KLADFG +F GTP ++APE++ M
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM--- 199
Query: 129 QYDGKVDVWSLGI 141
Y VD W++G+
Sbjct: 200 LYGPAVDWWAMGV 212
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
VME+ G R E + ++ L +LH G I+RD+K N+LL
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 676 GTVKL 680
G KL
Sbjct: 161 GHCKL 165
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 124/327 (37%), Gaps = 90/327 (27%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++EIG G FG V+ L +++ VAIK + ++ A D ++E + +L HP ++
Sbjct: 13 VQEIGSGQFGLVHLGYWL-NKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G L LV E F EH L ++
Sbjct: 68 LYGVCLEQAPICLVTE---------------------------------FMEHGCLSDYL 94
Query: 287 VHKRPL-KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+R L E + +C V G+ YL IHRD+ A N L+ E +K++DFG
Sbjct: 95 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154
Query: 346 C--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
S GT + W +PEV +Y K DVWS G+ E +E K PY N
Sbjct: 155 LDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--- 208
Query: 400 MSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSD 459
S+ V++ IS+ P A + +Y I
Sbjct: 209 ----------------RSNSEVVEDISTGFRLYKPRL---ASTHVYQI------------ 237
Query: 460 WSDTFAHFVSSCLAKNPADRPSSGRLL 486
++ C + P DRP+ RLL
Sbjct: 238 --------MNHCWRERPEDRPAFSRLL 256
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ +L HP ++ G L LV E+ G SD + + E + +C V
Sbjct: 54 AEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 113
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WMA 118
G+ YL IHRD+ A N L+ E +K++DFG S GT + W +
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 173
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV +Y K DVWS G+
Sbjct: 174 PEVF---SFSRYSSKSDVWSFGV 193
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G SD + + E + +C V G+ YL IHRD+ A N L+ E +K+
Sbjct: 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 145
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 68 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGV 207
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ +I++ +K + + A+ ++ EI L++L HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 76 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 101
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 99 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 104/242 (42%), Gaps = 56/242 (23%)
Query: 161 EKIFEDLREIGHGSFGAV----YYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRF 215
++ + +R++G G FG V Y + E+VA+K + G Q W +EI
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK---QEIDI 69
Query: 216 LRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQ 272
LR L H + I+Y+GC + + LVMEY LGS D + H I L Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG-----------LAQ 118
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
L F + IC G+ YLHS IHR++ A N+LL
Sbjct: 119 LLLFAQQ--------------------ICE----GMAYLHSQHYIHRNLAARNVLLDNDR 154
Query: 333 TVKLADFGSASIKCPANSFV------GTP-YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
VK+ DFG A + + +P +W APE + E ++ DVWS G+T
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKEYKFYYASDVWSFGVTLY 211
Query: 386 EL 387
EL
Sbjct: 212 EL 213
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 7 LLRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H + I+Y+GC + + LVMEY LGS D + H L + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV------GTP-YW 116
G+ YLHS IHR++ A N+LL VK+ DFG A + + +P +W
Sbjct: 127 CEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE + E ++ DVWS G+T
Sbjct: 187 YAPE---CLKEYKFYYASDVWSFGVT 209
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLVMEY LGS D + H L + + + G+ YLHS IHR++ A N+L
Sbjct: 92 SLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHSQHYIHRNLAARNVL 149
Query: 672 LTETGTVKL 680
L VK+
Sbjct: 150 LDNDRLVKI 158
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 67 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 185
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGV 206
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ +I++ +K + + A+ ++ EI L++L HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 75 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 100
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 101 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 161 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 98 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 147
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 53/285 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 83
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 138
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 139 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 335 KLADFG---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
K+ DFG +A FV T Y+ APEVIL M Y VD+WS+G E+ +
Sbjct: 168 KILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMIKGG 224
Query: 392 PPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ + + I Q TPC + + T+ + E +P Y
Sbjct: 225 VLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 268
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 106 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 162
Query: 89 ETGTVKLADFG---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGS 145
T+K+ DFG +A FV T Y+ APEVIL M Y VD+WS+G G
Sbjct: 163 SDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGE 219
Query: 146 L 146
+
Sbjct: 220 M 220
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 149
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 150 IHRDLKPSNIVVKSDCTLKI 169
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 207 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 265
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 325
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGV 346
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ I++ +K + + A+ ++ EI L++L HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 215 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 240
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 241 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 301 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 238 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 68 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGV 207
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ +I++ +K + + A+ ++ EI L++L HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 76 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 101
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 99 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 67
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 94
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 95 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 154
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 155 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 206
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 207 ------DQPSDSCQEYSDWKEKKT 224
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 116
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 177 LKRRE--FHAEPVDVWSCGIV 195
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 80 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
Query: 675 TGTVKL 680
+K+
Sbjct: 139 RDNLKI 144
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 137/354 (38%), Gaps = 72/354 (20%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILK 211
D ++FE E+G G+F V RC+ + +I+ KK+S Q E+
Sbjct: 31 DDYQLFE---ELGKGAFSVV--RRCVKKTPTQEYAAKIINTKKLSARDHQKLER------ 79
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E R R LKHPN + + +LV + G
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE----------------------- 116
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-- 329
LF V + E + + +L +N++H +HRD+K N+LL
Sbjct: 117 ----------LFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASK 166
Query: 330 -ETGTVKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+ VKLADFG A I+ F GTP +++PEV + + Y VD+W+ G+
Sbjct: 167 CKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEV---LRKDPYGKPVDIWACGVI 222
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMN 439
L PP+++ + LY + S +W + K + + P +
Sbjct: 223 LYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 281
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
A AL H C +S+ S CL K A R G +LT LV+R
Sbjct: 282 ADQALKH----PWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVSR 331
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKHPN + + +LV + G DI+ R E A+ C
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIH 137
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPANS-----FVGT 113
+L +N++H +HRD+K N+LL + VKLADFG A I+ F GT
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGT 196
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 197 PGYLSPEV---LRKDPYGKPVDIWACGV 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 74 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 192
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGV 213
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ +I++ +K + + A+ ++ EI L++L HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 82 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 107
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 108 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 168 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 105 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 154
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
C+ D + + Y + ++++ F E F
Sbjct: 105 CFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 141
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 142 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 192 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 239
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR--PLKEEEIAAICSGVL 64
++ +L HP ++ C+ D + + Y ++++ ++ E + ++
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYWMA 118
L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +++
Sbjct: 148 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PE+ + E D+W+LG
Sbjct: 208 PEL---LTEKSACKSSDLWALG 226
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 192
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIK---KMSYLGKQ---CAEKWADILKEIRFLR 217
FE L+ IG G+FG V + + ++ A+K K L + C + D+L
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----G 131
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
K T+ Y + D+ +LVM+Y +G G+ L L F
Sbjct: 132 DSKWITTLHY--AFQDDNNLYLVMDYYVG--------------------GDLLTLLSKFE 169
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+ L EE + ++ ++ +H L +HRD+K NIL+ G ++LA
Sbjct: 170 DR------------LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLA 217
Query: 338 DFGSA-----SIKCPANSFVGTPYWMAPEVILAMD--EGQYDGKVDVWSLGITCIELAER 390
DFGS ++ VGTP +++PE++ AM+ +G+Y + D WSLG+ E+
Sbjct: 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
Query: 391 KPPYF 395
+ P++
Sbjct: 278 ETPFY 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 26 DHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 84
D+ +LVM+Y +G ++ + L EE + ++ ++ +H L +HRD+K N
Sbjct: 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 205
Query: 85 ILLTETGTVKLADFGSA-----SIKCPANSFVGTPYWMAPEVILAMD--EGQYDGKVDVW 137
IL+ G ++LADFGS ++ VGTP +++PE++ AM+ +G+Y + D W
Sbjct: 206 ILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWW 265
Query: 138 SLGI 141
SLG+
Sbjct: 266 SLGV 269
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVM+Y +G ++ + L EE + ++ ++ +H L +HRD+K NIL+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 210
Query: 675 TGTVKL 680
G ++L
Sbjct: 211 NGHIRL 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 169 EIGHGSFGAVYYARCL-VSREIVA--IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTI 225
E+G G F V R +E A IKK + +I +E+ LR+++HPN I
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ L++E G LF+F
Sbjct: 93 TLHDIFENKTDVVLILELVSGGE---------------------------------LFDF 119
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGS 341
K L E+E +L G++YLHS H D+K NI+L + +KL DFG
Sbjct: 120 LAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 342 ASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
A N F GTP ++APE++ G + D+WS+G+ L P+
Sbjct: 180 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITYILLSGASPFLGET 236
Query: 399 AMSALYHIA 407
L +I+
Sbjct: 237 KQETLTNIS 245
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++LR+++HPN I + L++E G K L E+E +L
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G++YLHS H D+K NI+L + +KL DFG A N F GTP ++A
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 201 PEIVNYEPLGL---EADMWSIGV 220
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L E+E +L G++YLHS H D+K NI+L
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 68 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGV 207
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ +I++ +K + + A+ ++ EI L++L HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 76 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 101
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 99 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 118
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 179 LKRRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L++L HP I+ + + ++V+E G V + LKE +L
Sbjct: 193 ILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 67 LNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G IHRD+K N+LL+ E +K+ DFG + I + GTP ++APE
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
V++++ Y+ VD WSLG+
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGV 332
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 168 REIGHGSFGAVYYA----RCL-VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
+ +G G+ G V A C V+ I++ +K + + A+ ++ EI L++L HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I+ + + ++V+E G L
Sbjct: 201 CIIKIKN-FFDAEDYYIVLELMEGGE---------------------------------L 226
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
F+ V + LKE +L + YLH G IHRD+K N+LL+ E +K+ DF
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G + I + GTP ++APEV++++ Y+ VD WSLG+ PP+
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
G D + +KR LKE +L + YLH G IHRD+K N+LL+
Sbjct: 224 GELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 46/237 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKM--SYLGKQCAEKWADILKEIRFLRQLKH 221
FE R +G G FG VY AR S IVA+K + S + K+ E + +EI L H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH--QLRREIEIQAHLHH 82
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
PN + + +L++EY + LQ+ F E
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGE-----------------LYKELQKSCTFDE--- 122
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
+ A I + L Y H IHRD+K N+LL G +K+ADFG
Sbjct: 123 -------------QRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG- 168
Query: 342 ASIKCPA---NSFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPY 394
S+ P+ + GT ++ PE+I EG+ ++ KVD+W +G+ C EL PP+
Sbjct: 169 WSVHAPSLRRKTMCGTLDYLPPEMI----EGRMHNEKVDLWCIGVLCYELLVGNPPF 221
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKR-PLKEEEIAAICSGVLRGLN 68
L HPN + + +L++EY E+ K E+ A I + L
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYA-PRGELYKELQKSCTFDEQRTATIMEELADALM 137
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA---NSFVGTPYWMAPEVILAM 125
Y H IHRD+K N+LL G +K+ADFG S+ P+ + GT ++ PE+I
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFG-WSVHAPSLRRKTMCGTLDYLPPEMI--- 193
Query: 126 DEGQ-YDGKVDVWSLGI 141
EG+ ++ KVD+W +G+
Sbjct: 194 -EGRMHNEKVDLWCIGV 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 107/269 (39%), Gaps = 56/269 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G++G V A + EIVAIKK+ K L+EI+ L+ KH N I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFKHENIITIFN 76
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
D S + EV+ I+ E M L ++ +
Sbjct: 77 IQRPD------------SFENFNEVYIIQ-----ELMQTDLHRV-------------IST 106
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----- 344
+ L ++ I LR + LH IHRD+K N+L+ +K+ DFG A I
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 345 ---------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
+ +V T ++ APEV+L +Y +DVWS G EL R+P +
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVMLT--SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 396 NMNAMSALYHI--------AQNDTPCLQS 416
+ L I + ND C++S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 31/168 (18%)
Query: 7 LLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
+L+ KH N I D + +++ E +I L ++ I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIY 119
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--------------KCPA 107
LR + LH IHRD+K N+L+ +K+ DFG A I +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELF 155
+V T ++ APEV+L +Y +DVWS G +AELF
Sbjct: 180 TEYVATRWYRAPEVMLT--SAKYSRAMDVWSCGCI--------LAELF 217
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L ++ I LR + LH IHRD+K N+L+ +K+
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGC-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
ANSFVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANSFVGTAQYVSPEL---LTEKSASKSSDLWALGCIIYQLVAGLPPF 234
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P ANSFVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSASKSSDLWALG 221
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGNDSS 692
++ L YLH G IHRD+K NILL T+ GT K+ +P+ + +S
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 105/246 (42%), Gaps = 64/246 (26%)
Query: 161 EKIFEDLREIGHGSFGAV----YYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRF 215
++ + +R++G G FG V Y + E+VA+K + G Q W +EI
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK---QEIDI 86
Query: 216 LRQLKHPNTIEYRGCYLRDHTA---WLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQ 271
LR L H + I+Y+GC D A LVMEY LGS D + H I L
Sbjct: 87 LRTLYHEHIIKYKGC-CEDAGAASLQLVMEYVPLGSLRDYLPRHSIG-----------LA 134
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
QL F + IC G+ YLH+ IHRD+ A N+LL
Sbjct: 135 QLLLFAQQ--------------------ICE----GMAYLHAQHYIHRDLAARNVLLDND 170
Query: 332 GTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 381
VK+ DFG A ++ +S V +W APE + E ++ DVWS G
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FWYAPE---CLKEYKFYYASDVWSFG 224
Query: 382 ITCIEL 387
+T EL
Sbjct: 225 VTLYEL 230
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTA---WLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSG 62
+LR L H + I+Y+GC D A LVMEY LGS D + H L + +
Sbjct: 86 ILRTLYHEHIIKYKGC-CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQ 142
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVG 112
+ G+ YLH+ IHRD+ A N+LL VK+ DFG A ++ +S V
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV- 201
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE + E ++ DVWS G+T
Sbjct: 202 --FWYAPE---CLKEYKFYYASDVWSFGVT 226
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLVMEY LGS D + H L + + + G+ YLH+ IHRD+ A N+L
Sbjct: 109 SLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRDLAARNVL 166
Query: 672 LTETGTVKL 680
L VK+
Sbjct: 167 LDNDRLVKI 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ P Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMEPEVVTRYYRAPEVILGMG---YKENVDLWSVGCIMGEMVC 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
K + + + I Q TPC + + T+ + E +P Y
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKY 266
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ P Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMEPEVVTRYYRAPEVILGMG---YKENVDLWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 45/260 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
++ + ++G G VY A + VAIK + ++ E +E+ QL H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 224 TIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ D +LVMEY G + S+ IE H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------------------------- 106
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-- 340
PL + + +L G+ + H + +HRD+K NIL+ T+K+ DFG
Sbjct: 107 --------PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Query: 341 ---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
S + N +GT + +PE A E D D++S+GI E+ +PP+
Sbjct: 159 KALSETSLTQTNHVLGTVQYFSPE--QAKGEAT-DECTDIYSIGIVLYEMLVGEPPFNGE 215
Query: 398 NAMS-ALYHIAQNDTPCLQS 416
A+S A+ HI Q+ P + +
Sbjct: 216 TAVSIAIKHI-QDSVPNVTT 234
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 10 QLKHPNTIEYRGCYLRDHTAWLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLN 68
QL H N + D +LVMEY G + S+ IE H PL + + +L G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIK 125
Query: 69 YLHSLGRIHRDVKAGNILLTETGTVKLADFG-----SASIKCPANSFVGTPYWMAPEVIL 123
+ H + +HRD+K NIL+ T+K+ DFG S + N +GT + +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE--Q 183
Query: 124 AMDEGQYDGKVDVWSLGI 141
A E D D++S+GI
Sbjct: 184 AKGEAT-DECTDIYSIGI 200
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY G + S+ IE H PL + + +L G+ + H + +HRD+K NIL+
Sbjct: 88 LVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 675 TGTVKL 680
T+K+
Sbjct: 147 NKTLKI 152
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 48/267 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE ++ +G G FG V+ A+ V AIK++ ++ A + +++E++ L +L+HP
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALAKLEHPG 65
Query: 224 TIEYRGCYLRD---------HTAWLVME---YCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
+ Y +L WL E + L S S + R N +
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 272 QLKCFTEHFALF---------NFE--VHKRPLKEEEIAAICSGVL----RGLNYLHSLGR 316
QL+ + L+ N + +++R E+ +C + + +LHS G
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185
Query: 317 IHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSF------VGTPYWMAP 360
+HRD+K NI T VK+ DFG ++ P ++ VGT +M+P
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP 245
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E I Y KVD++SLG+ EL
Sbjct: 246 EQIHG---NNYSHKVDIFSLGLILFEL 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPAN 108
I + + +LHS G +HRD+K NI T VK+ DFG ++ P
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 109 SF------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
++ VGT +M+PE I Y KVD++SLG+
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHG---NNYSHKVDIFSLGL 264
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
I + + +LHS G +HRD+K NI T VK+
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 205
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 39 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 96
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 97 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 139
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 140 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 187 LDFGLARHTDDEMXGXVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 236
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 151
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A V T ++ AP
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAP 211
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 212 EIML--NWMHYNQTVDIWSVG 230
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 671 LLTETGTVKL-------DTPDEQAGNDSSK 693
+ E +K+ T DE G +++
Sbjct: 177 AVNEDCELKILDFGLARHTDDEMXGXVATR 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D+G A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDYGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ D+G A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDYGLARHTDDEMTG 181
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 169 EIGHGSFGAVYYARCL-VSREIVA--IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTI 225
E+G G F V R +E A IKK + +I +E+ LR+++HPN I
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ L++E G LF+F
Sbjct: 72 TLHDIFENKTDVVLILELVSGGE---------------------------------LFDF 98
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGS 341
K L E+E +L G++YLHS H D+K NI+L + +KL DFG
Sbjct: 99 LAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 342 ASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
A N F GTP ++APE++ G + D+WS+G+ L P+
Sbjct: 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITYILLSGASPFLGET 215
Query: 399 AMSALYHIA 407
L +I+
Sbjct: 216 KQETLTNIS 224
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++LR+++HPN I + L++E G K L E+E +L
Sbjct: 60 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSASIKCPANSF---VGTPYWMA 118
G++YLHS H D+K NI+L + +KL DFG A N F GTP ++A
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 180 PEIVNYEPLGL---EADMWSIGV 199
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L E+E +L G++YLHS H D+K NI+L
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 171 GHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADIL-KEIRFLRQLKHPNTIEYRG 229
G G FG VY + V+ VA+KK++ + E+ +EI+ + +H N +E G
Sbjct: 31 GEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
LV Y G+ L +L C
Sbjct: 89 FSSDGDDLCLVYVYXPN--------------------GSLLDRLSCLD----------GT 118
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------S 343
PL I G G+N+LH IHRD+K+ NILL E T K++DFG A +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 344 IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
+ VGT + APE + G+ K D++S G+ +E+ P
Sbjct: 179 QXVXXSRIVGTTAYXAPEAL----RGEITPKSDIYSFGVVLLEIITGLP 223
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA------SI 103
PL I G G+N+LH IHRD+K+ NILL E T K++DFG A +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 104 KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ VGT + APE + G+ K D++S G+
Sbjct: 180 XVXXSRIVGTTAYXAPEAL----RGEITPKSDIYSFGVV 214
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 635 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
PL I G G+N+LH IHRD+K+ NILL E T K+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 165
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 104/273 (38%), Gaps = 62/273 (22%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAV-----------YYARCLVSREIVAIKKMSYLGKQ 201
E F ++ E ++ E+G G F V Y A+ + R+ A ++
Sbjct: 3 ETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV----- 57
Query: 202 CAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREF 261
C E +I +E+ LRQ+ HPN I Y L++E G
Sbjct: 58 CRE---EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGE------------- 101
Query: 262 HVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 321
LF+F K L EEE + +L G+NYLH+ H D+
Sbjct: 102 --------------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 322 KAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGK 374
K NI+L + +KL DFG A + GTP ++APE++ G +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---E 198
Query: 375 VDVWSLGITCIELAERKPPYFNMNAMSALYHIA 407
D+WS+G+ L P+ L +I
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ HPN I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 36/239 (15%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F+ L ++G+G++ VY + VA+K++ ++ A ++EI +++LKH N
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA--IREISLMKELKHEN 64
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ ++ LV E+ M N LK + + +
Sbjct: 65 IVRLYDVIHTENKLTLVFEF----------------------MDN---DLKKYMDSRTVG 99
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
N R L+ + +L+GL + H +HRD+K N+L+ + G +KL DFG A
Sbjct: 100 N---TPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
+ P N+F V T ++ AP+V+ M Y +D+WS G E+ KP + N
Sbjct: 157 AFGIPVNTFSSEVVTLWYRAPDVL--MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC---LGSASDIIEVHKRP--LKEEEIAAIC 60
SL+++LKH N + ++ LV E+ L D V P L+ +
Sbjct: 55 SLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYW 116
+L+GL + H +HRD+K N+L+ + G +KL DFG A + P N+F V T ++
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG-----------ITPGSLKDPEIAELFD 156
AP+V+ M Y +D+WS G + PG+ + ++ +FD
Sbjct: 175 RAPDVL--MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFD 223
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+L+GL + H +HRD+K N+L+ + G +KL
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKL 149
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 56/242 (23%)
Query: 161 EKIFEDLREIGHGSFGAV----YYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRF 215
++ + +R++G G FG V Y + E+VA+K + G Q W +EI
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK---QEIDI 69
Query: 216 LRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQ 272
LR L H + I+Y+GC + + LVMEY LGS D + H I L Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG-----------LAQ 118
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
L F + IC G+ YLH+ IHR++ A N+LL
Sbjct: 119 LLLFAQQ--------------------ICE----GMAYLHAQHYIHRNLAARNVLLDNDR 154
Query: 333 TVKLADFGSASIKCPANSFV------GTP-YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
VK+ DFG A + + +P +W APE + E ++ DVWS G+T
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKEYKFYYASDVWSFGVTLY 211
Query: 386 EL 387
EL
Sbjct: 212 EL 213
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 7 LLRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H + I+Y+GC + + LVMEY LGS D + H L + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQI 126
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV------GTP-YW 116
G+ YLH+ IHR++ A N+LL VK+ DFG A + + +P +W
Sbjct: 127 CEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE + E ++ DVWS G+T
Sbjct: 187 YAPE---CLKEYKFYYASDVWSFGVT 209
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLVMEY LGS D + H L + + + G+ YLH+ IHR++ A N+L
Sbjct: 92 SLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRNLAARNVL 149
Query: 672 LTETGTVKL 680
L VK+
Sbjct: 150 LDNDRLVKI 158
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFGLARHTDDEMTGXVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DFG A V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAGNDSSK 693
+ E +K+ T DE G +++
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTGXVATR 186
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 57/287 (19%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRFLRQLK 220
K +++L+ IG G+ G V A + VAIKK+S Q K A +E+ ++ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVN 81
Query: 221 HPNTIEYRGCYLRDHT------AWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
H N I + + ++VME + +I++ E E M L Q+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQML 136
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
C G+ +LHS G IHRD+K NI++ T+
Sbjct: 137 C-------------------------------GIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 335 KLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ DFG A + SF+ P Y+ APEVIL M Y VD+WS+G E+
Sbjct: 166 KILDFGLA--RTAGTSFMMEPEVVTRYYRAPEVILGMG---YKENVDIWSVGCIMGEMVC 220
Query: 390 RKPPYFNMNAMSALYH-IAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
K + + + I Q TPC + + T+ + E +P Y
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPC-PAFMKKLQPTVRNYVENRPKY 266
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 29 AWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VME + +I++ L E ++ + +L G+ +LHS G IHRD+K NI++
Sbjct: 104 VYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 89 ETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITP 143
T+K+ DFG A + SF+ P Y+ APEVIL M Y VD+WS+G
Sbjct: 161 SDCTLKILDFGLA--RTAGTSFMMEPEVVTRYYRAPEVILGMG---YKENVDIWSVGCIM 215
Query: 144 GSL 146
G +
Sbjct: 216 GEM 218
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 611 LFSPQ----------LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 660
+F+PQ +VME + +I++ L E ++ + +L G+ +LHS G
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 661 IHRDVKAGNILLTETGTVKL 680
IHRD+K NI++ T+K+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKI 167
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 53/233 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G+FG V A+ VAIK++ ++ A + E+R L ++ HPN ++ G
Sbjct: 17 VGRGAFGVVCKAKWRAKD--VAIKQIESESERKA-----FIVELRQLSRVNHPNIVKLYG 69
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
L + LVMEY G + L+N
Sbjct: 70 ACL--NPVCLVMEYAEGGS---------------------------------LYNVLHGA 94
Query: 290 RPLKEEEIAAICSGVLR---GLNYLHSL---GRIHRDVKAGNILLTETGTV-KLADFGSA 342
PL A S L+ G+ YLHS+ IHRD+K N+LL GTV K+ DFG+A
Sbjct: 95 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
I+ + G+ WMAPEV + Y K DV+S GI E+ R+ P+
Sbjct: 155 CDIQTHMTNNKGSAAWMAPEV---FEGSNYSEKCDVFSWGIILWEVITRRKPF 204
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 8 LRQL---KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
LRQL HPN ++ G L + LVMEY G + + PL A S L
Sbjct: 53 LRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 110
Query: 65 R---GLNYLHSL---GRIHRDVKAGNILLTETGTV-KLADFGSA-SIKCPANSFVGTPYW 116
+ G+ YLHS+ IHRD+K N+LL GTV K+ DFG+A I+ + G+ W
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW 170
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
MAPEV + Y K DV+S GI
Sbjct: 171 MAPEV---FEGSNYSEKCDVFSWGI 192
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR---GLNYLHSL---GRIHRDVKAGN 669
LVMEY G + + PL A S L+ G+ YLHS+ IHRD+K N
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 670 ILLTETGTV 678
+LL GTV
Sbjct: 137 LLLVAGGTV 145
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ ++ L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 48 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCP 106
++ L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L D+G A P
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 107 ANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
+ V + Y+ PE L +D YD +D+WSLG S+
Sbjct: 185 GQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASM 225
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++ ++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQL-RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 94/242 (38%), Gaps = 52/242 (21%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
IG G G V Y R V R++ VAIK K Y +Q D L E + Q HPN
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR----DFLSEASIMGQFDHPNI 112
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G R A +V EY + D L+ F +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTF--------------------LRTHDGQFTIM- 151
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + GV G+ YL LG +HRD+ A N+L+ K++DFG + +
Sbjct: 152 -----------QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 345 ----KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFN 396
A + G W APE I + DVWS G+ E LA + PY+N
Sbjct: 201 LEDDPDAAXTTTGGKIPIRWTAPEAIAFR---TFSSASDVWSFGVVMWEVLAYGERPYWN 257
Query: 397 MN 398
M
Sbjct: 258 MT 259
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G R A +V EY GS + H ++ + GV
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY---W 116
G+ YL LG +HRD+ A N+L+ K++DFG + + A + G W
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I + DVWS G+
Sbjct: 221 TAPEAIAFR---TFSSASDVWSFGVV 243
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+V EY GS + H ++ + GV G+ YL LG +HRD+ A N+L+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DF A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDFYLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ DF A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDFYLARHTDDEMTG 181
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 62/246 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GS+G VY A + + VAIKK++ + + + IL+EI L +LK
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID-CKRILREITILNRLK--------- 83
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ +++ Y L D+++ + E +E + L++L K
Sbjct: 84 ------SDYIIRLYDLIIPDDLLK--FDELYIVLEIADSDLKKL--------------FK 121
Query: 290 RP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----- 342
P L EE I I +L G N++H G IHRD+K N LL + +VK+ DFG A
Sbjct: 122 TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
Query: 343 ---------------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 381
++K S V T ++ APE+IL + Y +D+WS G
Sbjct: 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE--NYTKSIDIWSTG 239
Query: 382 ITCIEL 387
EL
Sbjct: 240 CIFAEL 245
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 24 LRDHTAWLVMEYCLGSASDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVK 81
L+ ++V+E + SD+ ++ K P L EE I I +L G N++H G IHRD+K
Sbjct: 100 LKFDELYIVLEI---ADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLK 156
Query: 82 AGNILLTETGTVKLADFGSA--------------------------SIKCPANSFVGTPY 115
N LL + +VK+ DFG A ++K S V T +
Sbjct: 157 PANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRW 216
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLG 140
+ APE+IL + Y +D+WS G
Sbjct: 217 YRAPELILLQE--NYTKSIDIWSTG 239
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 626 SDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
SD+ ++ K P L EE I I +L G N++H G IHRD+K N LL + +VK+
Sbjct: 114 SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKV 170
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 53/233 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G+FG V A+ VAIK++ ++ A + E+R L ++ HPN ++ G
Sbjct: 16 VGRGAFGVVCKAKWRAKD--VAIKQIESESERKA-----FIVELRQLSRVNHPNIVKLYG 68
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
L + LVMEY G + L+N
Sbjct: 69 ACL--NPVCLVMEYAEGGS---------------------------------LYNVLHGA 93
Query: 290 RPLKEEEIAAICSGVLR---GLNYLHSL---GRIHRDVKAGNILLTETGTV-KLADFGSA 342
PL A S L+ G+ YLHS+ IHRD+K N+LL GTV K+ DFG+A
Sbjct: 94 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
Query: 343 -SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
I+ + G+ WMAPEV + Y K DV+S GI E+ R+ P+
Sbjct: 154 CDIQTHMTNNKGSAAWMAPEVF---EGSNYSEKCDVFSWGIILWEVITRRKPF 203
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 8 LRQL---KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
LRQL HPN ++ G L + LVMEY G + + PL A S L
Sbjct: 52 LRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 109
Query: 65 R---GLNYLHSL---GRIHRDVKAGNILLTETGTV-KLADFGSA-SIKCPANSFVGTPYW 116
+ G+ YLHS+ IHRD+K N+LL GTV K+ DFG+A I+ + G+ W
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW 169
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
MAPEV + Y K DV+S GI
Sbjct: 170 MAPEVF---EGSNYSEKCDVFSWGI 191
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR---GLNYLHSL---GRIHRDVKAGN 669
LVMEY G + + PL A S L+ G+ YLHS+ IHRD+K N
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 670 ILLTETGTV 678
+LL GTV
Sbjct: 136 LLLVAGGTV 144
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI L H N ++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINAMLNHENVVK 69
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 97 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 208
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 209 ------DQPSDSCQEYSDWKEKKT 226
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 11 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
L H N +++ G + +L +EYC G D IE + E + ++ G+ Y
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVY 120
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEVIL 123
LH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 124 AMDEGQYDGKVDVWSLGIT 142
+ + VDVWS GI
Sbjct: 181 RRE--FHAEPVDVWSCGIV 197
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 82 LFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 675 TGTVKL 680
+K+
Sbjct: 141 RDNLKI 146
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 101 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 137
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 138 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
ANSFVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 188 KQARANSFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 235
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P ANSFVGT +
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 202 VSPEL---LTEKSACKSSDLWALG 222
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGNDSS 692
++ L YLH G IHRD+K NILL T+ GT K+ +P+ + +S
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KH 221
+ +G G+FG V A + +E V + E +D++ E+ ++ + KH
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
N I G +D ++++EY GN + L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPGM 140
Query: 282 LFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+AD
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 339 FGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
FG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 148/384 (38%), Gaps = 79/384 (20%)
Query: 164 FEDLREIGHGSFGAVYYARC---LVSRE----IVAIKKMSYLGKQCAEKWADILKEIRFL 216
++ E+G G+F V RC L +E I+ KK+S Q E+ E R
Sbjct: 13 YQLFEELGKGAFSVV--RRCVKVLAGQEYAAMIINTKKLSARDHQKLER------EARIC 64
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
R LKHPN + + +L+ + G
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE---------------------------- 96
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGT 333
LF V + E + + +L + + H +G +HR++K N+LL +
Sbjct: 97 -----LFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151
Query: 334 VKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VKLADFG A I+ F GTP +++PEV + + Y VD+W+ G+ L
Sbjct: 152 VKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEV---LRKDPYGKPVDLWACGVILYILL 207
Query: 389 ERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMNAMSAL 444
PP+++ + LY + S +W + K + + P + A AL
Sbjct: 208 VGYPPFWDED-QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 266
Query: 445 YH--IAQNDT--PCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTRPRS--PS 498
H I+ T C+ + D CL K A R G +LT L TR S
Sbjct: 267 KHPWISHRSTVASCMHRQETVD--------CLKKFNARRKLKGAILTVMLATRNFSVRKQ 318
Query: 499 VLVDLIRRTKAAVRDLDNLNYRKM 522
++ + + A+ + D +Y KM
Sbjct: 319 EIIKVTEQLIEAISNGDFESYTKM 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKHPN + + +L+ + G DI+ R E A+ C
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV---AREYYSEADASHCIQ 117
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPANS-----FVGT 113
+L + + H +G +HR++K N+LL + VKLADFG A I+ F GT
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGT 176
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 177 PGYLSPEV---LRKDPYGKPVDLWACGV 201
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 72/348 (20%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILK 211
D ++FE E+G G+F V RC+ + +I+ KK+S Q E+
Sbjct: 4 DEYQLFE---ELGKGAFSVV--RRCMKIPTGQEYAAKIINTKKLSARDHQKLER------ 52
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E R R LKHPN + + +LV + G
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE----------------------- 89
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL--- 328
LF V + E + + +L +N+ H G +HRD+K N+LL
Sbjct: 90 ----------LFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 329 TETGTVKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
++ VKLADFG A I+ + F GTP +++PEV + + Y VD+W+ G+
Sbjct: 140 SKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEV---LRKDPYGKPVDMWACGVI 195
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMN 439
L PP+++ + LY + S +W + K + + P +
Sbjct: 196 LYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 254
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLT 487
A AL H C +S+ S CL K A R G +LT
Sbjct: 255 ASEALKH----PWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKHPN + + +LV + G DI+ R E A+ C
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQ 110
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSASIKCPANS-----FVGT 113
+L +N+ H G +HRD+K N+LL ++ VKLADFG A I+ + F GT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGT 169
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 170 PGYLSPEV---LRKDPYGKPVDMWACGV 194
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 103/242 (42%), Gaps = 56/242 (23%)
Query: 161 EKIFEDLREIGHGSFGAV----YYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRF 215
++ + +R++G G FG V Y + E+VA+K + G Q W +EI
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ---REIEI 64
Query: 216 LRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQ 272
LR L H + ++Y+GC + + LVMEY LGS D + H + L Q
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG-----------LAQ 113
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
L F + IC G+ YLH+ IHR + A N+LL
Sbjct: 114 LLLFAQQ--------------------ICE----GMAYLHAQHYIHRALAARNVLLDNDR 149
Query: 333 TVKLADFGSASIKCPANSFV------GTP-YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
VK+ DFG A + + +P +W APE + E ++ DVWS G+T
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKECKFYYASDVWSFGVTLY 206
Query: 386 EL 387
EL
Sbjct: 207 EL 208
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 7 LLRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H + ++Y+GC + + LVMEY LGS D + H L + + +
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQI 121
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV------GTP-YW 116
G+ YLH+ IHR + A N+LL VK+ DFG A + + +P +W
Sbjct: 122 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE + E ++ DVWS G+T
Sbjct: 182 YAPE---CLKECKFYYASDVWSFGVT 204
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLVMEY LGS D + H L + + + G+ YLH+ IHR + A N+L
Sbjct: 87 SVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQICEGMAYLHAQHYIHRALAARNVL 144
Query: 672 LTETGTVKL 680
L VK+
Sbjct: 145 LDNDRLVKI 153
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 56/269 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G++G V A + EIVAIKK+ K L+EI+ L+ KH N I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFKHENIITIFN 76
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
D S + EV+ I+ E M L ++ +
Sbjct: 77 IQRPD------------SFENFNEVYIIQ-----ELMQTDLHRV-------------IST 106
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----- 344
+ L ++ I LR + LH IHRD+K N+L+ +K+ DFG A I
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 345 ---------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
+ V T ++ APEV+L +Y +DVWS G EL R+P +
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVMLT--SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 396 NMNAMSALYHI--------AQNDTPCLQS 416
+ L I + ND C++S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 31/168 (18%)
Query: 7 LLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
+L+ KH N I D + +++ E +I L ++ I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIY 119
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--------------KCPA 107
LR + LH IHRD+K N+L+ +K+ DFG A I +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELF 155
V T ++ APEV+L +Y +DVWS G +AELF
Sbjct: 180 TEXVATRWYRAPEVMLT--SAKYSRAMDVWSCGCI--------LAELF 217
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L ++ I LR + LH IHRD+K N+L+ +K+
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G+ G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAM 400
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW------ 207
Query: 401 SALYHIAQNDTPCLQSSDWSVIKT 424
Q C + SDW KT
Sbjct: 208 ------DQPSDSCQEYSDWKEKKT 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 103/242 (42%), Gaps = 56/242 (23%)
Query: 161 EKIFEDLREIGHGSFGAV----YYARCLVSREIVAIKKMSY-LGKQCAEKWADILKEIRF 215
++ + +R++G G FG V Y + E+VA+K + G Q W +EI
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ---REIEI 63
Query: 216 LRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQ 272
LR L H + ++Y+GC + + LVMEY LGS D + H + L Q
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG-----------LAQ 112
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
L F + IC G+ YLH+ IHR + A N+LL
Sbjct: 113 LLLFAQQ--------------------ICE----GMAYLHAQHYIHRALAARNVLLDNDR 148
Query: 333 TVKLADFGSASIKCPANSFV------GTP-YWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
VK+ DFG A + + +P +W APE + E ++ DVWS G+T
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKECKFYYASDVWSFGVTLY 205
Query: 386 EL 387
EL
Sbjct: 206 EL 207
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 7 LLRQLKHPNTIEYRGCY--LRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H + ++Y+GC + + LVMEY LGS D + H L + + +
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQI 120
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV------GTP-YW 116
G+ YLH+ IHR + A N+LL VK+ DFG A + + +P +W
Sbjct: 121 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE + E ++ DVWS G+T
Sbjct: 181 YAPE---CLKECKFYYASDVWSFGVT 203
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLVMEY LGS D + H L + + + G+ YLH+ IHR + A N+L
Sbjct: 86 SVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQICEGMAYLHAQHYIHRALAARNVL 143
Query: 672 LTETGTVKL 680
L VK+
Sbjct: 144 LDNDRLVKI 152
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+L+ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+L+
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+L+
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LLR +HPN I + Y ++V E G + ++ E E +A+ + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTETG---TVKLADFGSASIKCPANSFVGTPYW----MA 118
+ YLH+ G +HRD+K NIL + E+G ++++ DFG A N + TP + +A
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVA 188
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKED-PEKIFEDLREIGHGSF 175
PEV ++ YD D+WSLG+ ++ +D PE+I L IG G F
Sbjct: 189 PEV---LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI---LARIGSGKF 240
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 52/242 (21%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIR-FLRQLKHP 222
+E +IG GS+ RC I M + K + D +EI LR +HP
Sbjct: 24 YEVKEDIGVGSYSVC--KRC-----IHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHP 76
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N I + Y ++V E G G L ++
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKG--------------------GELLDKI--------- 107
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTETG---TVKLAD 338
+ ++ E E +A+ + + + YLH+ G +HRD+K NIL + E+G ++++ D
Sbjct: 108 ----LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICD 163
Query: 339 FGSASIKCPANSFVGTPYW----MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
FG A N + TP + +APEV ++ YD D+WSLG+ + P+
Sbjct: 164 FGFAKQLRAENGLLMTPCYTANFVAPEV---LERQGYDAACDIWSLGVLLYTMLTGYTPF 220
Query: 395 FN 396
N
Sbjct: 221 AN 222
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+ ++ E E +A+ + + + YLH+ G +HRD+K NIL +
Sbjct: 108 LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LLR +HPN I + Y ++V E G + ++ E E +A+ + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTETG---TVKLADFGSASIKCPANSFVGTPYW----MA 118
+ YLH+ G +HRD+K NIL + E+G ++++ DFG A N + TP + +A
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV ++ YD D+WSLG+
Sbjct: 189 PEV---LERQGYDAACDIWSLGV 208
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTETG---TVKLA 337
L + + ++ E E +A+ + + + YLH+ G +HRD+K NIL + E+G ++++
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 338 DFGSASIKCPANSFVGTPYW----MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
DFG A N + TP + +APEV ++ YD D+WSLG+ P
Sbjct: 163 DFGFAKQLRAENGLLXTPCYTANFVAPEV---LERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 394 YFN 396
+ N
Sbjct: 220 FAN 222
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+ ++ E E +A+ + + + YLH+ G +HRD+K NIL +
Sbjct: 108 LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 139/347 (40%), Gaps = 76/347 (21%)
Query: 169 EIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
E+G G+F V RC+ + +I+ KK+S A + + +E R R+L+H
Sbjct: 36 ELGKGAFSVV--RRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQH 87
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR-LQQLKCFTEHF 280
PN + + +LV + G ++ E + REF+ E + +QQ
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGG--ELFE-DIVAREFYSEADASHCIQQ-------- 136
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLA 337
+L + Y HS G +HR++K N+LL + VKLA
Sbjct: 137 -----------------------ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 338 DFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
DFG A + + F GTP +++PEV + + Y VD+W+ G+ L PP+
Sbjct: 174 DFGLAIEVNDSEAWHGFAGTPGYLSPEV---LKKDPYSKPVDIWACGVILYILLVGYPPF 230
Query: 395 F--NMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMNAMSALYHIA 448
+ + + + A D P S +W + K++ + P + A AL
Sbjct: 231 WDEDQHRLYAQIKAGAYDYP---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL---- 283
Query: 449 QNDTP--CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLVTR 493
P C + S CL K A R G +LT + TR
Sbjct: 284 --KVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIATR 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R+L+HPN + + +LV + G DI+ R E A+ C
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQ 135
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA---SIKCPANSFVGTPY 115
+L + Y HS G +HR++K N+LL + VKLADFG A + + F GTP
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 195
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
+++PEV + + Y VD+W+ G+
Sbjct: 196 YLSPEV---LKKDPYSKPVDIWACGV 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANXFVGTAQYVSPEL---LTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSAXKSSDLWALG 221
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 111/286 (38%), Gaps = 59/286 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G+FG V + ++ VA+K ++ + + I +EI+ L+ +HP+ I+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
++VMEY G LF++
Sbjct: 84 VISTPSDIFMVMEYVSGGE---------------------------------LFDYICKN 110
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN 349
L E+E + +L G++Y H +HRD+K N+LL K+ADFG +++
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
Query: 350 SF---VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMNAMSALYH 405
G+P + APEVI Y G +VD+WS G+ LY
Sbjct: 171 FLRXSCGSPNYAAPEVISGR---LYAGPEVDIWSSGVI-------------------LYA 208
Query: 406 IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ P ++ K I P Y N + +S L H+ Q D
Sbjct: 209 LLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVD 254
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRG 66
L+ +HP+ I+ ++VMEY G D I + R L E+E + +L G
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSG 128
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVIL 123
++Y H +HRD+K N+LL K+ADFG +++ G+P + APEVI
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS 188
Query: 124 AMDEGQYDG-KVDVWSLGITPGSL-------KDPEIAELFDK 157
Y G +VD+WS G+ +L D + LF K
Sbjct: 189 GR---LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK 227
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G D I + R L E+E + +L G++Y H +HRD+K N+LL
Sbjct: 93 MVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA 151
Query: 675 TGTVKL 680
K+
Sbjct: 152 HMNAKI 157
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
FG A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LGFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ FG A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILGFGLARHTDDEMTG 181
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 102/262 (38%), Gaps = 61/262 (23%)
Query: 155 FDKEDPEKIFEDLRE----IGHGSFGAVYYARCLVSREI-----VAIKKMSYLGKQCAEK 205
D D + +FED+ E IG G+F V RC ++RE V I ++
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVV--RRC-INRETGQQFAVKIVDVAKFTSSPGLS 69
Query: 206 WADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG 265
D+ +E LKHP+ +E Y D ++V E+ G
Sbjct: 70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG------------------- 110
Query: 266 MGNRLQQLKCFTEHFALFNFEVHKRP----LKEEEIAA-ICSGVLRGLNYLHSLGRIHRD 320
A FE+ KR + E +A+ +L L Y H IHRD
Sbjct: 111 ---------------ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 321 VKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
VK N+LL + VKL DFG A A VGTP++MAPEV+ Y
Sbjct: 156 VKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGK 212
Query: 374 KVDVWSLGITCIELAERKPPYF 395
VDVW G+ L P++
Sbjct: 213 PVDVWGCGVILFILLSGCLPFY 234
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA-I 59
+S+ LKHP+ +E Y D ++V E+ G A E+ KR + E +A+
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG-ADLCFEIVKRADAGFVYSEAVASHY 135
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVG 112
+L L Y H IHRDVK N+LL + VKL DFG A A VG
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVG 195
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
TP++MAPEV+ Y VDVW G+
Sbjct: 196 TPHFMAPEVV---KREPYGKPVDVWGCGV 221
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLT 673
+L L Y H IHRDVK N+LL
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLA 164
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 45/255 (17%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRF 215
D ++ K +E IG G F V A +++ E+VAIK M I EI
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMD--KNTLGSDLPRIKTEIEA 61
Query: 216 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKC 275
L+ L+H + + + ++V+EYC G
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGE--------------------------- 94
Query: 276 FTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVK 335
LF++ + + L EEE + ++ + Y+HS G HRD+K N+L E +K
Sbjct: 95 ------LFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLK 148
Query: 336 LADFGSASIKCPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
L DFG + K N + G+ + APE+I + + DVWS+GI L
Sbjct: 149 LIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQG--KSYLGSEADVWSMGILLYVLMC 205
Query: 390 RKPPYFNMNAMSALY 404
P+ + N M ALY
Sbjct: 206 GFLPFDDDNVM-ALY 219
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGL 67
L+ L+H + + + ++V+EYC G + + L EEE + ++ +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAV 121
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN------SFVGTPYWMAPEV 121
Y+HS G HRD+K N+L E +KL DFG + K N + G+ + APE+
Sbjct: 122 AYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + + DVWS+GI
Sbjct: 181 IQG--KSYLGSEADVWSMGI 198
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+V+EYC G + + L EEE + ++ + Y+HS G HRD+K N+L E
Sbjct: 85 MVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEY 144
Query: 676 GTVKL 680
+KL
Sbjct: 145 HKLKL 149
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSA----SIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A +I N+ G WMAPE + + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKNTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFV 111
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A +I N+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 112 GT--PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
G WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 97 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 133
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 134 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
ANSFVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 184 KQARANSFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 231
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P ANSFVGT +
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 198 VSPEL---LTEKSACKSSDLWALG 218
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGNDSS 692
++ L YLH G IHRD+K NILL T+ GT K+ +P+ + +S
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 53/283 (18%)
Query: 141 ITPGSLKDPEIA-ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--K 194
I P + +DP A F KE + R IG G FG V R + R++ VAIK K
Sbjct: 21 IDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
+ Y KQ D L E + Q HPN + G R +V+E+ A D
Sbjct: 81 VGYTEKQ----RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF-- 134
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
L+ F + ++ + G+ G+ YL +
Sbjct: 135 ------------------LRKHDGQFTVI------------QLVGMLRGIAAGMRYLADM 164
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAMD 367
G +HRD+ A NIL+ K++DFG + + P + T W APE A+
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE---AIQ 221
Query: 368 EGQYDGKVDVWSLGITCIE-LAERKPPYFNMNAMSALYHIAQN 409
++ DVWS GI E ++ + PY++M+ + I +
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASD-IIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN + G R +V+E+ A D + H ++ + G+
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGI 154
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P + T W
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE A+ ++ DVWS GI
Sbjct: 215 TAPE---AIQYRKFTSASDVWSYGIV 237
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGSASD-IIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V+E+ A D + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS 180
Query: 675 TGTVKL 680
K+
Sbjct: 181 NLVCKV 186
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D G A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDAGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ D G A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDAGLARHTDDEMTG 181
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 132/305 (43%), Gaps = 49/305 (16%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCAE--KWADILKEIR 214
E P + E + +G G+FG V A +S+ V+I+ + K+ A+ + ++ E++
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 215 FLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+ QL H N + G +L+ EYC G+ L L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCC--------------------YGDLLNYL 140
Query: 274 KCFTEHFAL--FNFEVHKRPLKEEEIAAI------CSG--VLRGLNYLHSLGRIHRDVKA 323
+ E F+ +E KR +EE++ + C V +G+ +L +HRD+ A
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200
Query: 324 GNILLTETGTVKLADFGSA-SIKCPANSFV-GTPY----WMAPEVILAMDEGQYDGKVDV 377
N+L+T VK+ DFG A I +N V G WMAPE + EG Y K DV
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF---EGIYTIKSDV 257
Query: 378 WSLGITCIELAERK-PPYFNMNAMSALYHIAQN----DTPCLQSSD-WSVIKTISSTAER 431
WS GI E+ PY + + Y + QN D P + + + ++++ + R
Sbjct: 258 WSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSR 317
Query: 432 KPPYF 436
K P F
Sbjct: 318 KRPSF 322
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 33/165 (20%)
Query: 7 LLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCL--------------GSASDIIEVHKRPL 51
++ QL H N + G +L+ EYC S +I +++ L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 52 KEEE---------IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 101
+EEE + V +G+ +L +HRD+ A N+L+T VK+ DFG A
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 102 SIKCPANSFV-GTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
I +N V G WMAPE + EG Y K DVWS GI
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLF---EGIYTIKSDVWSYGI 262
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L E++ V +G+ +L +HRD+ A N+L+T VK+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYL 70
HPN ++ + +LVME L + ++ E K+ E E + I ++ ++++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVME--LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 71 HSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSFVGTP----YWMAPEVIL 123
H +G +HRD+K N+L T+ +K+ DFG A +K P N + TP ++ APE+
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL-- 180
Query: 124 AMDEGQYDGKVDVWSLGI 141
+++ YD D+WSLG+
Sbjct: 181 -LNQNGYDESCDLWSLGV 197
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 52/239 (21%)
Query: 166 DLRE--IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK-HP 222
DL++ +G GSF S + A+K +S A+ KEI L+ + HP
Sbjct: 13 DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS------KRMEANTQKEITALKLCEGHP 66
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N ++ + +LVME G G +++K
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNG--------------------GELFERIK-------- 98
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADF 339
K+ E E + I ++ ++++H +G +HRD+K N+L T+ +K+ DF
Sbjct: 99 -----KKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDF 153
Query: 340 GSASIKCPANSFVGTP----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A +K P N + TP ++ APE+ +++ YD D+WSLG+ + + P+
Sbjct: 154 GFARLKPPDNQPLKTPCFTLHYAAPEL---LNQNGYDESCDLWSLGVILYTMLSGQVPF 209
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 616 LVMEYCLGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
LVME L + ++ E K+ E E + I ++ ++++H +G +HRD+K N+L T
Sbjct: 83 LVME--LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 674 ET-----------GTVKLDTPDEQ 686
+ G +L PD Q
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQ 164
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 172
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 173 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 394 YFN 396
+F+
Sbjct: 231 FFH 233
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 107 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 221
Query: 144 GSL 146
S+
Sbjct: 222 ASM 224
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 107 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 50/244 (20%)
Query: 155 FDKEDPEKIFED----LREIGHGSFGAVYYARCLVSREIVAIKK-MS-YLG-KQCAEKWA 207
+D PE F+ L +GHGS+G V+ R + A+K+ MS + G K A K A
Sbjct: 46 YDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA 105
Query: 208 DILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMG 267
++ + +HP + + +L E C G
Sbjct: 106 EVGSHEKVG---QHPCCVRLEQAWEEGGILYLQTELC----------------------G 140
Query: 268 NRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 327
LQQ + E L E ++ L L +LHS G +H DVK NI
Sbjct: 141 PSLQQ-----------HCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF 189
Query: 328 LTETGTVKLADFG---SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 384
L G KL DFG G P +MAPE++ +G Y DV+SLG+T
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL----QGSYGTAADVFSLGLTI 245
Query: 385 IELA 388
+E+A
Sbjct: 246 LEVA 249
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLH 71
+HP + + +L E C S E L E ++ L L +LH
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 72 SLGRIHRDVKAGNILLTETGTVKLADFG---SASIKCPANSFVGTPYWMAPEVILAMDEG 128
S G +H DVK NI L G KL DFG G P +MAPE++ +G
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL----QG 230
Query: 129 QYDGKVDVWSLGIT 142
Y DV+SLG+T
Sbjct: 231 SYGTAADVFSLGLT 244
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 27/65 (41%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
L E C S E L E ++ L L +LHS G +H DVK NI L
Sbjct: 134 LQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR 193
Query: 676 GTVKL 680
G KL
Sbjct: 194 GRCKL 198
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 171
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 172 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
Query: 394 YFN 396
+F+
Sbjct: 230 FFH 232
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 106 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 220
Query: 144 GSL 146
S+
Sbjct: 221 ASM 223
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 106 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 114 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 173
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 394 YFN 396
+F+
Sbjct: 232 FFH 234
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 222
Query: 144 GSL 146
S+
Sbjct: 223 ASM 225
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 108 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++ +G G++G V A V+ E VA+K + K+ + +I KEI + L H N ++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM--KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G + +L +EYC G LF+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGE---------------------------------LFDRI 95
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-- 344
+ E + ++ G+ YLH +G HRD+K N+LL E +K++DFG A++
Sbjct: 96 EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 345 ----KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ N GT ++APE++ + + VDVWS GI + + P+
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGL 67
+ L H N +++ G + +L +EYC G D IE + E + ++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGV 117
Query: 68 NYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYWMAPEV 121
YLH +G HRD+K N+LL E +K++DFG A++ + N GT ++APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 122 ILAMDEGQYDGKVDVWSLGIT 142
+ + + VDVWS GI
Sbjct: 178 LKRRE--FHAEPVDVWSCGIV 196
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
L +EYC G D IE + E + ++ G+ YLH +G HRD+K N+LL E
Sbjct: 81 LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 675 TGTVKL 680
+K+
Sbjct: 140 RDNLKI 145
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 172
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE L +D YD +D+WSLG + RK P
Sbjct: 173 IDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 394 YFN 396
+F+
Sbjct: 231 FFH 233
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 107 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE L +D YD +D+WSLG
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE--LLVDYQMYDYSLDMWSLGCML 221
Query: 144 GSL 146
S+
Sbjct: 222 ASM 224
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 107 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 98 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 134
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 135 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN+FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 185 KQARANAFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN+FVGT +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 199 VSPEL---LTEKSACKSSDLWALG 219
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 185
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D G A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDRGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ D G A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLGITPGSL 146
E++L + Y+ VD+WS+G L
Sbjct: 192 EIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDRGLARHTDDEMTG 181
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKL 336
EH +F+ + L + +I +L+ L+Y HS+G +HRDVK N+++ E ++L
Sbjct: 119 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL 178
Query: 337 ADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
D+G A P + V + Y+ PE+++ D YD +D+WSLG + RK P
Sbjct: 179 IDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEP 236
Query: 394 YFN 396
+F+
Sbjct: 237 FFH 239
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 113 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
E ++L D+G A P + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 170 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 227
Query: 144 GSL 146
S+
Sbjct: 228 ASM 230
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV E+ + +D ++++ L + +I +L+ L+Y HS+G +HRDVK N+++
Sbjct: 113 TPALVFEHV--NNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
K+ PE F+ + +G GSF V AR L + AIK + K + +E +
Sbjct: 6 KKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 64
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+L HP ++ + D + + Y + ++++ F
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSF 107
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
E F + ++ L YLH G IHRD+K NILL E +++
Sbjct: 108 DETCTRF----------------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 151
Query: 337 ADFGSASIKCP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
DFG+A + P AN FVGT +++PE+ + E D+W+LG +L
Sbjct: 152 TDFGTAKVLSPESKQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAG 208
Query: 391 KPPY 394
PP+
Sbjct: 209 LPPF 212
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 179 VSPEL---LTEKSACKSSDLWALG 199
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGN 689
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
K+ PE F+ + +G GSF V AR L + AIK + K + +E +
Sbjct: 5 KKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 63
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+L HP ++ + D + + Y + ++++ F
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSF 106
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
E F + ++ L YLH G IHRD+K NILL E +++
Sbjct: 107 DETCTRF----------------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 150
Query: 337 ADFGSASIKCP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
DFG+A + P AN FVGT +++PE+ + E D+W+LG +L
Sbjct: 151 TDFGTAKVLSPESKQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAG 207
Query: 391 KPPY 394
PP+
Sbjct: 208 LPPF 211
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 178 VSPEL---LTEKSACKSSDLWALG 198
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGN 689
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E PE+ +++L +G G++G+V A + VA+KK+S + +E+R L+
Sbjct: 19 EVPER-YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLK 76
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL-KCF 276
+KH N I + A + E + + H+ MG L + KC
Sbjct: 77 HMKHENVIGLLDVF--------------TPARSLEEFNDVYLVTHL--MGADLNNIVKC- 119
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L ++ + + +LRGL Y+HS IHRD+K N+ + E +K+
Sbjct: 120 -------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 337 ADFGSAS-IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D G A +V T ++ APE++L + Y+ VD+WS+G EL
Sbjct: 167 LDGGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAEL 216
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCY-----LRDHTAWLVMEYCLGS-ASDIIEVHKRPLKEEEIAAIC 60
LL+ +KH N I + L + ++ + +G+ ++I++ K L ++ + +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLI 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-IKCPANSFVGTPYWMAP 119
+LRGL Y+HS IHRD+K N+ + E +K+ D G A +V T ++ AP
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAP 191
Query: 120 EVILAMDEGQYDGKVDVWSLG 140
E++L + Y+ VD+WS+G
Sbjct: 192 EIML--NWMHYNQTVDIWSVG 210
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 612 FSPQLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
F+ ++ + +G+ ++I++ K L ++ + + +LRGL Y+HS IHRD+K N+
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 671 LLTETGTVKL-------DTPDEQAG 688
+ E +K+ T DE G
Sbjct: 157 AVNEDCELKILDGGLARHTDDEMTG 181
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 169 EIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
E+G G+F V RC+ + +I+ KK+S A + + +E R R+L+H
Sbjct: 13 ELGKGAFSVV--RRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQH 64
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
PN + + +LV + G DI+ REF+ E + Q
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQ------- 112
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKL 336
+L + Y HS G +HR++K N+LL + VKL
Sbjct: 113 -----------------------QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 337 ADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
ADFG A + + F GTP +++PEV + + Y VD+W+ G+ L PP
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEV---LKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 394 YFN 396
+++
Sbjct: 207 FWD 209
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R+L+HPN + + +LV + G DI+ R E A+ C
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQ 112
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA---SIKCPANSFVGTPY 115
+L + Y HS G +HR++K N+LL + VKLADFG A + + F GTP
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
+++PEV + + Y VD+W+ G+
Sbjct: 173 YLSPEV---LKKDPYSKPVDIWACGV 195
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 169 EIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
E+G G+F V RC+ + +I+ KK+S A + + +E R R+L+H
Sbjct: 12 ELGKGAFSVV--RRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQH 63
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
PN + + +LV + G DI+ REF+ E + Q
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQ------- 111
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKL 336
+L + Y HS G +HR++K N+LL + VKL
Sbjct: 112 -----------------------QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 337 ADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
ADFG A + + F GTP +++PEV + + Y VD+W+ G+ L PP
Sbjct: 149 ADFGLAIEVNDSEAWHGFAGTPGYLSPEV---LKKDPYSKPVDIWACGVILYILLVGYPP 205
Query: 394 YFN 396
+++
Sbjct: 206 FWD 208
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R+L+HPN + + +LV + G DI+ R E A+ C
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQ 111
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA---SIKCPANSFVGTPY 115
+L + Y HS G +HR++K N+LL + VKLADFG A + + F GTP
Sbjct: 112 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 171
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
+++PEV + + Y VD+W+ G+
Sbjct: 172 YLSPEV---LKKDPYSKPVDIWACGV 194
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 185
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 245
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 246 DFGLARDINNIDYYKKTTNGRLPVKWMAPE---ALFDRVYTHQSDVWSFGVLMWEI 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 265 GRLPVKWMAPE---ALFDRVYTHQSDVWSFGV 293
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 186 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 241
Query: 678 VKL 680
+K+
Sbjct: 242 MKI 244
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
K+ PE F+ + +G GSF V AR L + AIK + K + +E +
Sbjct: 3 KKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 61
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+L HP ++ + D + + Y + ++++ F
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSF 104
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
E F + ++ L YLH G IHRD+K NILL E +++
Sbjct: 105 DETCTRF----------------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 148
Query: 337 ADFGSASIKCP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
DFG+A + P AN FVGT +++PE+ + E D+W+LG +L
Sbjct: 149 TDFGTAKVLSPESKQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAG 205
Query: 391 KPPY 394
PP+
Sbjct: 206 LPPF 209
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 176 VSPEL---LTEKSACKSSDLWALG 196
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGN 689
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 169 EIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
E+G G+F V RC+ + +I+ KK+S A + + +E R R+L+H
Sbjct: 13 ELGKGAFSVV--RRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQH 64
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
PN + + +LV + G DI+ REF+ E + Q
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQ------- 112
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKL 336
+L + Y HS G +HR++K N+LL + VKL
Sbjct: 113 -----------------------QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 337 ADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 393
ADFG A + + F GTP +++PEV + + Y VD+W+ G+ L PP
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEV---LKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 394 YFN 396
+++
Sbjct: 207 FWD 209
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R+L+HPN + + +LV + G DI+ R E A+ C
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQ 112
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA---SIKCPANSFVGTPY 115
+L + Y HS G +HR++K N+LL + VKLADFG A + + F GTP
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
+++PEV + + Y VD+W+ G+
Sbjct: 173 YLSPEV---LKKDPYSKPVDIWACGV 195
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 103 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 139
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 140 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 190 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 237
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 204 VSPEL---LTEKSACKSSDLWALG 224
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 190
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 126/354 (35%), Gaps = 95/354 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 111
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NIL++ T VK+ DFG A +
Sbjct: 112 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARA 165
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 398 NAMSALY-HIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ +S Y H+ ++ P P +
Sbjct: 223 SPVSVAYQHVREDPIP----------------------------------------PSAR 242
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV-----TRPRSPSVLVDLIR 505
S V LAKNP +R + + DLV P +P VL D R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NIL++
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS 150
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 151 ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 206
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NIL+
Sbjct: 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI 149
Query: 673 TETGTVKL 680
+ T VK+
Sbjct: 150 SATNAVKV 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
K+ PE F+ + +G GSF V AR L + AIK + K + +E +
Sbjct: 4 KKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 62
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+L HP ++ + D + + Y + ++++ F
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSF 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
E F + ++ L YLH G IHRD+K NILL E +++
Sbjct: 106 DETCTRF----------------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 149
Query: 337 ADFGSASIKCP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
DFG+A + P AN FVGT +++PE+ + E D+W+LG +L
Sbjct: 150 TDFGTAKVLSPESKQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAG 206
Query: 391 KPPY 394
PP+
Sbjct: 207 LPPF 210
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 177 VSPEL---LTEKSACKSSDLWALG 197
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQAGN 689
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 98 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 134
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 135 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 185 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 199 VSPEL---LTEKSACKSSDLWALG 219
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 185
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 98 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 134
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 135 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 185 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 199 VSPEL---LTEKSACKSSDLWALG 219
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 185
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 101 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 137
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 138 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 188 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 235
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 202 VSPEL---LTEKSACKSSDLWALG 222
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 188
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSACKSSDLWALG 221
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSA-------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A K N + WMAPE A+ + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVK-WMAPE---ALFDRVYTHQSDVWSFGVLMWEI 252
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 27/153 (17%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-------SIKCPAN 108
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A K N
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WMAPE A+ + Y + DVWS G+
Sbjct: 219 GRLPVK-WMAPE---ALFDRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSACKSSDLWALG 221
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE ++ IG G+FG V + + I A+K IL + L++ +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMK---------------ILNKWEMLKRAETAC 120
Query: 224 TIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
E R + W+ + Y + + ++ +++V G + L L F +
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHL----YLVMDYYVGG--DLLTLLSKFED---- 170
Query: 283 FNFEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
K P E++A G ++ ++ +H L +HRD+K N+LL G ++LADFGS
Sbjct: 171 ------KLP---EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGS 221
Query: 342 A-----SIKCPANSFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGITCIELAERKPPY 394
++ VGTP +++PE++ AM++ G+Y + D WSLG+ E+ + P+
Sbjct: 222 CLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
Query: 395 F 395
+
Sbjct: 282 Y 282
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
+LVM+Y +G ++ + L E+ ++ ++ +H L +HRD+K N+LL
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 89 ETGTVKLADFGSA-----SIKCPANSFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGI 141
G ++LADFGS ++ VGTP +++PE++ AM++ G+Y + D WSLG+
Sbjct: 210 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 269
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVM+Y +G ++ + L E+ ++ ++ +H L +HRD+K N+LL
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 675 TGTVKL 680
G ++L
Sbjct: 211 NGHIRL 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPE---ALFDRVYTHQSDVWSFGVLMWEI 252
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPE---ALFDRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSACKSSDLWALG 221
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
FE ++ IG G+FG V + + I A+K IL + L++ +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMK---------------ILNKWEMLKRAETAC 136
Query: 224 TIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
E R + W+ + Y + + ++ +++V G + L L F +
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHL----YLVMDYYVGG--DLLTLLSKFED---- 186
Query: 283 FNFEVHKRPLKEEEIAAICSG-VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
K P E++A G ++ ++ +H L +HRD+K N+LL G ++LADFGS
Sbjct: 187 ------KLP---EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGS 237
Query: 342 A-----SIKCPANSFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGITCIELAERKPPY 394
++ VGTP +++PE++ AM++ G+Y + D WSLG+ E+ + P+
Sbjct: 238 CLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
Query: 395 F 395
+
Sbjct: 298 Y 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
+LVM+Y +G ++ + L E+ ++ ++ +H L +HRD+K N+LL
Sbjct: 166 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 89 ETGTVKLADFGSA-----SIKCPANSFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGI 141
G ++LADFGS ++ VGTP +++PE++ AM++ G+Y + D WSLG+
Sbjct: 226 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 285
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVM+Y +G ++ + L E+ ++ ++ +H L +HRD+K N+LL
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 675 TGTVKL 680
G ++L
Sbjct: 227 NGHIRL 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 100 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 136
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 137 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 187 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 201 VSPEL---LTEKSACKSSDLWALG 221
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG A + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG A + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGIV 239
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 82 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 118
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 119 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 169 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 216
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 183 VSPEL---LTEKSACKSSDLWALG 203
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 169
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 160/405 (39%), Gaps = 86/405 (21%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK-HP 222
+E ++++G G++G V+ + + E+VA+KK+ + Q + +EI L +L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 223 NTIEYRGCYLR---DHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
N + LR D +LV +Y +E + H N L+
Sbjct: 70 NIVNLLNV-LRADNDRDVYLVFDY-------------METDLHAVIRANILE-------- 107
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
VHK+ + +++ + YLHS G +HRD+K NILL VK+ADF
Sbjct: 108 ------PVHKQ--------YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADF 153
Query: 340 GSA----SIKCPANS---------------------FVGTPYWMAPEVILAMDEGQYDGK 374
G + +I+ N+ +V T ++ APE++L +Y
Sbjct: 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG--STKYTKG 211
Query: 375 VDVWSLGITCIELAERKPPYFNMNAMSALYHI-------AQNDTPCLQSSDWSVIKTISS 427
+D+WSLG E+ KP + + M+ L I + D +QS KT+
Sbjct: 212 IDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQS---PFAKTMIE 268
Query: 428 TAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLT 487
+ + K N +D ++ + L NP R S+ L
Sbjct: 269 SLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK 328
Query: 488 HDLVTRPRSPS--------VLVDLIRRTKAAVRDLDNLNYRKMKK 524
H V+ +P+ + + + K ++ D NL Y ++ +
Sbjct: 329 HPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDDYRNLVYSEISR 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 41/152 (26%)
Query: 26 DHTAWLVMEYCLGSASDIIE------VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRD 79
D +LV +Y +I VHK+ + +++ + YLHS G +HRD
Sbjct: 83 DRDVYLVFDYMETDLHAVIRANILEPVHKQ--------YVVYQLIKVIKYLHSGGLLHRD 134
Query: 80 VKAGNILLTETGTVKLADFGSA----SIKCPANS---------------------FVGTP 114
+K NILL VK+ADFG + +I+ N+ +V T
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATR 194
Query: 115 YWMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
++ APE++L +Y +D+WSLG G +
Sbjct: 195 WYRAPEILLG--STKYTKGIDMWSLGCILGEI 224
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ +++ + YLHS G +HRD+K NILL VK+
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKV 150
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 125/328 (38%), Gaps = 81/328 (24%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEY 227
R++G G+FG V+ S IK ++ Q I EI L+ L HPN I+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP--MEQIEAEIEVLKSLDHPNIIKI 85
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
+ H ++VME C G +ER + G
Sbjct: 86 FEVFEDYHNMYIVMETCEGG-------ELLERIVSAQARG-------------------- 118
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET---GTVKLADFGSASI 344
+ L E +A + ++ L Y HS +H+D+K NIL +T +K+ DFG A +
Sbjct: 119 --KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
Query: 345 KCP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
+ + GT +MAPEV + K D+WS G+ YF +
Sbjct: 177 FKSDEHSTNAAGTALYMAPEVF----KRDVTFKCDIWSAGVVM---------YFLL---- 219
Query: 402 ALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWS 461
T CL + S ++ + A K P + + TP Q+ D
Sbjct: 220 ---------TGCLPFTGTS-LEEVQQKATYKEPNYAVECRPL--------TP--QAVD-- 257
Query: 462 DTFAHFVSSCLAKNPADRPSSGRLLTHD 489
+ L K+P RPS+ ++L H+
Sbjct: 258 -----LLKQMLTKDPERRPSAAQVLHHE 280
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKR--PLKEEEIAAICSG 62
+L+ L HPN I+ + H ++VME C G I+ R L E +A +
Sbjct: 73 VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTET---GTVKLADFGSASIKCP---ANSFVGTPYW 116
++ L Y HS +H+D+K NIL +T +K+ DFG A + + + GT +
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
MAPEV + K D+WS G+
Sbjct: 193 MAPEVF----KRDVTFKCDIWSAGVV 214
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 616 LVMEYCLGSA--SDIIEVHKR--PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
+VME C G I+ R L E +A + ++ L Y HS +H+D+K NIL
Sbjct: 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENIL 156
Query: 672 LTET 675
+T
Sbjct: 157 FQDT 160
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 50/241 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 88
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 128
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
F+F P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 129 RPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 334 VKLADFGSA-------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
+K+ADFG A K N + WMAPE A+ + Y + DVWS G+ E
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVK-WMAPE---ALFDRIYTHQSDVWSFGVLLWE 244
Query: 387 L 387
+
Sbjct: 245 I 245
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-------SIKCPAN 108
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A K N
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WMAPE A+ + Y + DVWS G+
Sbjct: 212 GRLPVK-WMAPE---ALFDRIYTHQSDVWSFGV 240
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 191
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 242 EYCL---GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIA 298
EYCL G ++ EV+ I E M N + F E+F + + + + + + I
Sbjct: 103 EYCLTCEGIITNYDEVYII-----YEYMEN--DSILKFDEYFFVLD-KNYTCFIPIQVIK 154
Query: 299 AICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTP 355
I VL +Y+H+ I HRDVK NIL+ + G VKL+DFG + + GT
Sbjct: 155 CIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTY 214
Query: 356 YWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCL 414
+M PE +E Y+G KVD+WSLGI LY + N P
Sbjct: 215 EFMPPEFF--SNESSYNGAKVDIWSLGI-------------------CLYVMFYNVVPF- 252
Query: 415 QSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAK 474
S S+++ ++ + Y ++ LY + + C ++ S+ F+ L K
Sbjct: 253 -SLKISLVELFNNIRTKNIEY-PLDRNHFLYPLTNKKSTC-SNNFLSNEDIDFLKLFLRK 309
Query: 475 NPADRPSSGRLLTHD 489
NPA+R +S L H+
Sbjct: 310 NPAERITSEDALKHE 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 56 IAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVG 112
I I VL +Y+H+ I HRDVK NIL+ + G VKL+DFG + + G
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG 212
Query: 113 TPYWMAPEVILAMDEGQYDG-KVDVWSLGI---------TPGSLKDPEIAELFD 156
T +M PE +E Y+G KVD+WSLGI P SLK + ELF+
Sbjct: 213 TYEFMPPEFF--SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK-ISLVELFN 263
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 641 IAAICSGVLRGLNYLHSLGRI-HRDVKAGNILLTETGTVKL 680
I I VL +Y+H+ I HRDVK NIL+ + G VKL
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKL 193
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAVYYAR-CLVSREIVA--IKKMSYLGKQCAEKWADI 209
E F ++ E ++ E+G G F V R E A IKK + +I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
+E+ LRQ+ H N I Y L++E G
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE--------------------- 101
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
LF+F K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 102 ------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 330 ETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 382
+ +KL DFG A + GTP ++APE++ G + D+WS+G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 206
Query: 383 TCIELAERKPPYFNMNAMSALYHIA 407
L P+ L +I
Sbjct: 207 ITYILLSGASPFLGDTKQETLANIT 231
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ H N I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF V AR L + AIK + K + +E + +L HP ++
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 97 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 133
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 134 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 184 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 231
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 198 VSPEL---LTEKSACKSSDLWALG 218
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 184
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 126
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIA 186
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 187 DFGLARDINNIDYYKKTTNGRLPVKWMAPE---ALFDRVYTHQSDVWSFGVLMWEI 239
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 206 GRLPVKWMAPE---ALFDRVYTHQSDVWSFGV 234
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 127 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV 182
Query: 678 VKL 680
+K+
Sbjct: 183 MKI 185
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 131
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 191
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 192 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 244
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 211 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 239
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 132 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 187
Query: 678 VKL 680
+K+
Sbjct: 188 MKI 190
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +++A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIA 199
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +++ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+++
Sbjct: 196 MRI 198
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 126/354 (35%), Gaps = 95/354 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 111
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NI+++ T VK+ DFG A +
Sbjct: 112 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 398 NAMSALY-HIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ +S Y H+ ++ P P +
Sbjct: 223 SPVSVAYQHVREDPIP----------------------------------------PSAR 242
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV-----TRPRSPSVLVDLIR 505
S V LAKNP +R + + DLV P +P VL D R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI+++
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 206
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI++
Sbjct: 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 673 TETGTVK-LDTPDEQAGNDSSKSNSITSEHSV 703
+ T VK +D +A DS NS+T +V
Sbjct: 150 SATNAVKVMDFGIARAIADS--GNSVTQTAAV 179
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 128
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 188
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 189 DFGLARDINNIDYYKKTTNGRLPVKWMAPE---ALFDRVYTHQSDVWSFGVLMWEI 241
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 208 GRLPVKWMAPE---ALFDRVYTHQSDVWSFGV 236
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 129 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 184
Query: 678 VKL 680
+K+
Sbjct: 185 MKI 187
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 220 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 270
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 124 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 239
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 240 YDKSCDMWSLGV 251
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 136 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 195 TSKRPNAILKLTDFGFAKETTSHNSLTT 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 71/261 (27%)
Query: 152 AELFDKEDPEKIFED-----LREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQC 202
A+L+ +DP IFE+ + ++G G+FG+V R + +VA+K++ + G
Sbjct: 9 AQLYACQDP-TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--- 64
Query: 203 AEKWADILKEIRFLRQLKHPNTIEYRGCYLRD--HTAWLVMEY----CLGSASDIIEVHW 256
++ D +EI+ L+ L ++YRG + LVMEY CL
Sbjct: 65 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL----------- 113
Query: 257 IEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 316
R+F + H+ L + S + +G+ YL S
Sbjct: 114 --RDF-----------------------LQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 317 IHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAM 366
+HRD+ A NIL+ VK+ADFG A ++ P S + +W APE ++
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE---SL 202
Query: 367 DEGQYDGKVDVWSLGITCIEL 387
+ + + DVWS G+ EL
Sbjct: 203 SDNIFSRQSDVWSFGVVLYEL 223
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L ++YRG + LVMEY G D ++ H+ L + S +
Sbjct: 77 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 136
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGT 113
+G+ YL S +HRD+ A NIL+ VK+ADFG A ++ P S +
Sbjct: 137 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-- 194
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ + + + DVWS G+
Sbjct: 195 -FWYAPE---SLSDNIFSRQSDVWSFGVV 219
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S +LVMEY G D ++ H+ L + S + +G+ YL S +HRD+ A NIL
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 672 LTETGTVKL 680
+ VK+
Sbjct: 160 VESEAHVKI 168
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 166 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 225
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 226 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 130 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 245
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 246 YDKSCDMWSLGV 257
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 142 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 200
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 201 TSKRPNAILKLTDFGFAKETTSHNSLTT 228
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 120 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 179
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 180 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 230
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 84 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 143 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 199
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 200 YDKSCDMWSLGV 211
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 96 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 154
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 155 TSKRPNAILKLTDFGFAKETTSHNSLTT 182
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 176 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 80 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 195
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 196 YDKSCDMWSLGV 207
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 92 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 151 TSKRPNAILKLTDFGFAKETTSHNSLTT 178
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 84 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 114
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 115 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 229 ETAEHIAQ 236
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 70 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 190 PEVLMY---SKFSSKSDIWAFGV 209
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSN 695
+ +++ +C V + YL S +HRD+ A N L+ + G VK+ +D S
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV--------SDFGLSR 168
Query: 696 SITSEHSVQSVG 707
+ + SVG
Sbjct: 169 YVLDDEETSSVG 180
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAVYYAR-CLVSREIVA--IKKMSYLGKQCAEKWADI 209
E F ++ E ++ E+G G F V R E A IKK + +I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
+E+ LRQ+ H N I Y L++E G
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE--------------------- 101
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
LF+F K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 102 ------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 330 ETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 382
+ +KL DFG A + GTP ++APE++ G + D+WS+G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 206
Query: 383 TCIELAERKPPYFNMNAMSALYHIA 407
L P+ L +I
Sbjct: 207 ITYILLSGASPFLGDTKQETLANIT 231
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ H N I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAVYYAR-CLVSREIVA--IKKMSYLGKQCAEKWADI 209
E F ++ E ++ E+G G F V R E A IKK + +I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
+E+ LRQ+ H N I Y L++E G
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE--------------------- 101
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
LF+F K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 102 ------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 330 ETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 382
+ +KL DFG A + GTP ++APE++ G + D+WS+G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 206
Query: 383 TCIELAERKPPYFNMNAMSALYHIA 407
L P+ L +I
Sbjct: 207 ITYILLSGASPFLGDTKQETLANIT 231
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ H N I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPA 348
E E + I + + YLHS+ HRDVK N+L T +KL DFG A
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 179
Query: 349 NSFVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
NS TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 180 NSLTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 232
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 86 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 145 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 201
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 202 YDKSCDMWSLGV 213
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 98 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 156
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 157 TSKRPNAILKLTDFGFAKETTSHNSLTT 184
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 121 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 180
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 181 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 231
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 85 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 144 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 200
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 201 YDKSCDMWSLGV 212
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 97 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 155
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 156 TSKRPNAILKLTDFGFAKETTSHNSLTT 183
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAVYYAR-CLVSREIVA--IKKMSYLGKQCAEKWADI 209
E F ++ E ++ E+G G F V R E A IKK + +I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
+E+ LRQ+ H N I Y L++E G
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE--------------------- 101
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
LF+F K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 102 ------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 330 ETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 382
+ +KL DFG A + GTP ++APE++ G + D+WS+G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 206
Query: 383 TCIELAERKPPYFNMNAMSALYHIA 407
L P+ L +I
Sbjct: 207 ITYILLSGASPFLGDTKQETLANIT 231
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ H N I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 115 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 174
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 175 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 225
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 79 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 138 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 194
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 195 YDKSCDMWSLGV 206
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 91 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 149
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 150 TSKRPNAILKLTDFGFAKETTSHNSLTT 177
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 176 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 80 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 195
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 196 YDKSCDMWSLGV 207
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 92 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 151 TSKRPNAILKLTDFGFAKETTSHNSLTT 178
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 174 LTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 78 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 193
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 194 YDKSCDMWSLGV 205
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 90 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 149 TSKRPNAILKLTDFGFAKETTSHNSLTT 176
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 153 ELFDKEDPEKIFEDLREIGHGSFGAVYYAR-CLVSREIVA--IKKMSYLGKQCAEKWADI 209
E F ++ E ++ E+G G F V R E A IKK + +I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
+E+ LRQ+ H N I Y L++E G
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE--------------------- 101
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
LF+F K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 102 ------------LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 330 ETGT----VKLADFGSA---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 382
+ +KL DFG A + GTP ++APE++ G + D+WS+G+
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 206
Query: 383 TCIELAERKPPYFNMNAMSALYHIA 407
L P+ L +I
Sbjct: 207 ITYILLSGASPFLGDTKQETLANIT 231
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+LRQ+ H N I Y L++E G K L EEE + +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGT----VKLADFGSA---SIKCPANSFVGTPYWMA 118
G+NYLH+ H D+K NI+L + +KL DFG A + GTP ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE++ G + D+WS+G+
Sbjct: 187 PEIVNYEPLGL---EADMWSIGV 206
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++E G K L EEE + +L G+NYLH+ H D+K NI+L
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 42/231 (18%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G GSF AR L + AIK + K + +E + +L HP ++
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ D + + Y + ++++ F E F
Sbjct: 98 TFQDDEKLYFGLSYAKNGE-----------------LLKYIRKIGSFDETCTRF------ 134
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP-- 347
+ ++ L YLH G IHRD+K NILL E +++ DFG+A + P
Sbjct: 135 ----------YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 348 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
AN FVGT +++PE+ + E D+W+LG +L PP+
Sbjct: 185 KQARANXFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCP------ANSFVGTPYW 116
++ L YLH G IHRD+K NILL E +++ DFG+A + P AN FVGT +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 117 MAPEVILAMDEGQYDGKVDVWSLG 140
++PE+ + E D+W+LG
Sbjct: 199 VSPEL---LTEKSACKSSDLWALG 219
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILL--------TETGTVKLDTPDEQ 686
++ L YLH G IHRD+K NILL T+ GT K+ +P+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 185
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 126/354 (35%), Gaps = 95/354 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 111
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NI+++ T VK+ DFG A +
Sbjct: 112 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 398 NAMSALY-HIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ +S Y H+ ++ P P +
Sbjct: 223 SPVSVAYQHVREDPIP----------------------------------------PSAR 242
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV-----TRPRSPSVLVDLIR 505
S V LAKNP +R + + DLV P +P VL D R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI+++
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 206
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI++
Sbjct: 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 673 TETGTVK-LDTPDEQAGNDSSKSNSITSEHSV 703
+ T VK +D +A DS NS+T +V
Sbjct: 150 SATNAVKVMDFGIARAIADS--GNSVTQTAAV 179
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPA 348
E E + I + + YLHS+ HRDVK N+L T +KL DFG A
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 187
Query: 349 NSFVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
NS TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 188 NSLTTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 240
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 94 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 153 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEK 209
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 210 YDKSCDMWSLGV 221
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 106 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 164
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 165 TSKRPNAILKLTDFGFAKETTSHNSLTT 192
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 121/321 (37%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGIV 239
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D+WSLG+ L PP+++ + ++
Sbjct: 174 LTEPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 19 YRGCYLRDHTAWLVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGR 75
Y Y +VME CL + R E E + I + + YLHS+
Sbjct: 78 YENLYAGRKCLLIVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 76 IHRDVKAGNILLTE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQ 129
HRDVK N+L T +KL DFG A NS TPY++APEV + +
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV---LGPEK 193
Query: 130 YDGKVDVWSLGI 141
YD D+WSLG+
Sbjct: 194 YDKSCDMWSLGV 205
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VME CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 90 IVME-CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSIT 698
T + L D +++ NS+T
Sbjct: 149 TSKRPNAILKLTDFGFAKETTSHNSLT 175
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 145/363 (39%), Gaps = 75/363 (20%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGK--QCAEKWADILKEIRFLRQLKH 221
F +R++G G+FG V + + +++ A+K + + K + A+ ADILK+I+ + +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQ-NDDINN 95
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
N ++Y G ++ L+ E S +II + FH+
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYN-GFHI------------------ 136
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL------------- 328
E+I C +L+ LNYL + H D+K NILL
Sbjct: 137 -------------EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR 183
Query: 329 ------------TETGTVKLADFGSASIKCPAN-SFVGTPYWMAPEVILAMDEGQYDGKV 375
T++ +KL DFG A+ K + S + T + APEVIL + +D
Sbjct: 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLG---WDVSS 240
Query: 376 DVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
D+WS G EL + M L + P ++ + KT S K
Sbjct: 241 DMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL 300
Query: 436 F-----NMNAMSALYHIAQNDTPCLQSSDW--SDTFAHFVSSCLAKNPADRPSSGRLLTH 488
N ++++++ H+ + CL + F F+ S L +P RPS LL H
Sbjct: 301 KLAWPENASSINSIKHVKK----CLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356
Query: 489 DLV 491
+
Sbjct: 357 KFL 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 54 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-------------------------T 88
E+I C +L+ LNYL + H D+K NILL T
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 89 ETGTVKLADFGSASIKCPAN-SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSL 146
++ +KL DFG A+ K + S + T + APEVIL + +D D+WS G L
Sbjct: 197 KSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLG---WDVSSDMWSFGCVLAEL 252
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
E+I C +L+ LNYL + H D+K NILL +
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 445 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ T VKL DFG + + + + WMAPE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 564 I---NFRRFTSASDVWMFGV 580
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 58/258 (22%)
Query: 150 EIAELFDKEDPEKI-----FEDLRE-------IGHGSFGAVYYARCLVSREIVAIKKMSY 197
+ AE+ D+ED + +E RE IG G FG V+ +S E A+
Sbjct: 366 DYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQG-IYMSPENPAMAVAIK 424
Query: 198 LGKQCAEKWA--DILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEV 254
K C L+E +RQ HP+ ++ G + ++ W++ME C LG ++V
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV 483
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
R+F ++ L+ +++ L YL S
Sbjct: 484 ----RKFSLD------------LASLILYAYQLST-----------------ALAYLESK 510
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEG 369
+HRD+ A N+L++ T VKL DFG + + + + WMAPE I +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFR 567
Query: 370 QYDGKVDVWSLGITCIEL 387
++ DVW G+ E+
Sbjct: 568 RFTSASDVWMFGVCMWEI 585
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 526
Query: 675 TGTVKL 680
T VKL
Sbjct: 527 TDCVKL 532
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 162 KIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
K F + +G G+F V+ + ++ ++ A+K + K A + + + EI L+++KH
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKIKH 65
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
N + Y +LVM+ G
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGE--------------------------------- 92
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLAD 338
LF+ + + E++ + + VL + YLH G +HRD+K N+L E + + D
Sbjct: 93 LFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
Query: 339 FGSASIKCPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
FG + ++ ++ GTP ++APEV + + Y VD WS+G+ L PP++
Sbjct: 153 FGLSKMEQNGIMSTACGTPGYVAPEV---LAQKPYSKAVDCWSIGVITYILLCGYPPFY 208
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLK-----EEEIAAIC 60
++L+++KH N + Y +LVM+ G E+ R L+ E++ + +
Sbjct: 58 AVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG-----ELFDRILERGVYTEKDASLVI 112
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPA--NSFVGTPY 115
VL + YLH G +HRD+K N+L E + + DFG + ++ ++ GTP
Sbjct: 113 QQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG 172
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGITPGSL---KDPEIAELFDKEDPEKIFEDLREIGH 172
++APEV + + Y VD WS+G+ L P F +E K+FE ++E G+
Sbjct: 173 YVAPEV---LAQKPYSKAVDCWSIGVITYILLCGYPP-----FYEETESKLFEKIKE-GY 223
Query: 173 GSFGAVYY 180
F + ++
Sbjct: 224 YEFESPFW 231
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 638 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
E++ + + VL + YLH G +HRD+K N+L
Sbjct: 105 EKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 138
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 42/237 (17%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++EY GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSA-------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A K N + WMAPE A+ + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVK-WMAPE---ALFDRVYTHQSDVWSFGVLMWEI 252
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 27/153 (17%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++EY + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-------SIKCPAN 108
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A K N
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WMAPE A+ + Y + DVWS G+
Sbjct: 219 GRLPVK-WMAPE---ALFDRVYTHQSDVWSFGV 247
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 627 DIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 84 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 114
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 115 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 229 ETAEHIAQ 236
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 70 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 190 PEVLMY---SKFSSKSDIWAFGV 209
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSN 695
+ +++ +C V + YL S +HRD+ A N L+ + G VK+ +D S
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV--------SDFGLSR 168
Query: 696 SITSEHSVQSVG 707
+ + SVG
Sbjct: 169 YVLDDEYTSSVG 180
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 68 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 98
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 99 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 155
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 212
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 213 ETAEHIAQ 220
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 54 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 113
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 114 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 174 PEVLMY---SKFSSKSDIWAFGV 193
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSN 695
+ +++ +C V + YL S +HRD+ A N L+ + G VK+ +D S
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV--------SDFGLSR 152
Query: 696 SITSEHSVQSVG 707
+ + SVG
Sbjct: 153 YVLDDEYTSSVG 164
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 64 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 94
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 95 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 151
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 208
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 209 ETAEHIAQ 216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 50 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 109
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 110 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 170 PEVLMY---SKFSSKSDIWAFGV 189
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSN 695
+ +++ +C V + YL S +HRD+ A N L+ + G VK+ +D S
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV--------SDFGLSR 148
Query: 696 SITSEHSVQSVG 707
+ + SVG
Sbjct: 149 YVLDDEYTSSVG 160
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LLR +HPN I + Y +LV E G + ++ E E + + + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTETGT---VKLADFGSASIKCPANSFVGTPYW----MA 118
+ YLHS G +HRD+K NIL + E+G +++ DFG A N + TP + +A
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV + YD D+WSLGI
Sbjct: 194 PEV---LKRQGYDEGCDIWSLGI 213
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 174 SFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIR-FLRQLKHPNTIEYRGCYL 232
+ G Y+ C R + M Y K + D +EI LR +HPN I + Y
Sbjct: 34 TIGVGSYSEC--KRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYD 91
Query: 233 RDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPL 292
+LV E G + +++ + K F+E A F
Sbjct: 92 DGKHVYLVTELMRGGE-----------------LLDKILRQKFFSEREASF--------- 125
Query: 293 KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTETGT---VKLADFGSASIKCPA 348
+ + + + YLHS G +HRD+K NIL + E+G +++ DFG A
Sbjct: 126 -------VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 349 NSFVGTPYW----MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
N + TP + +APEV + YD D+WSLGI + P+ N
Sbjct: 179 NGLLMTPCYTANFVAPEV---LKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+ ++ E E + + + + + YLHS G +HRD+K NIL +
Sbjct: 113 LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVD 156
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 126/354 (35%), Gaps = 95/354 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 111
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NI+++ T VK+ DFG A +
Sbjct: 112 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 398 NAMSALY-HIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ +S Y H+ ++ P P +
Sbjct: 223 SPVSVAYQHVREDPIP----------------------------------------PSAR 242
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV-----TRPRSPSVLVDLIR 505
S V LAKNP +R + + DLV P +P VL D R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI+++
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 206
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI++
Sbjct: 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 673 TETGTVK-LDTPDEQAGNDSSKSNSITSEHSV 703
+ T VK +D +A DS NS+T +V
Sbjct: 150 SATNAVKVMDFGIARAIADS--GNSVTQTAAV 179
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK 220
E F D R +G G FG V+ + + ++ A KK++ + + + + E + L ++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 221 HPNTIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
H+ ++V + Y + +D+ V I + G R
Sbjct: 243 --------------HSRFIVSLAYAFETKTDLCLVMTI-----MNGGDIR---------- 273
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
+ ++N + +E + ++ GL +LH I+RD+K N+LL + G V+++D
Sbjct: 274 YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 340 GSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A + + + GTP +MAPE++L +YD VD ++LG+T E+ + P+
Sbjct: 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFVGTPYWMA 118
++ GL +LH I+RD+K N+LL + G V+++D G A + + + GTP +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 119 PEVILAMDEGQYDGKVDVWSLGIT 142
PE++L +YD VD ++LG+T
Sbjct: 358 PELLLGE---EYDFSVDYFALGVT 378
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ GL +LH I+RD+K N+LL + G V++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+ +L HP +++ G +++ ++V EY G + + H + L+ ++ +C V G
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN--SFVGTPY---WMAPEV 121
+ +L S IHRD+ A N L+ VK++DFG S VGT + W APEV
Sbjct: 117 MAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV 176
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
+Y K DVW+ GI
Sbjct: 177 FHYF---KYSSKSDVWAFGI 193
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 125/326 (38%), Gaps = 86/326 (26%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V + + VA+K + K+ + + +E + + +L HP ++
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYD-VAVKMI----KEGSMSEDEFFQEAQTMMKLSHPKLVK 67
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
+ G +++ ++V EY G L L+
Sbjct: 68 FYGVCSKEYPIYIVTEYI--------------------SNGCLLNYLRS----------- 96
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC 346
H + L+ ++ +C V G+ +L S IHRD+ A N L+ VK++DFG
Sbjct: 97 -HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155
Query: 347 PAN--SFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
S VGT + W APEV +Y K DVW+ GI E+ F++ M
Sbjct: 156 DDQYVSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWAFGILMWEV-------FSLGKMP 205
Query: 402 ALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWS 461
Y + N V+ +S P H+A S
Sbjct: 206 --YDLYTNS---------EVVLKVSQGHRLYRP-----------HLA------------S 231
Query: 462 DTFAHFVSSCLAKNPADRPSSGRLLT 487
DT + SC + P RP+ +LL+
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++ Y GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++ Y + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK 220
E F D R +G G FG V+ + + ++ A KK++ + + + + E + L ++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 221 HPNTIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
H+ ++V + Y + +D+ V I + G R
Sbjct: 243 --------------HSRFIVSLAYAFETKTDLCLVMTI-----MNGGDIR---------- 273
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
+ ++N + +E + ++ GL +LH I+RD+K N+LL + G V+++D
Sbjct: 274 YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 340 GSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A + + + GTP +MAPE++L +YD VD ++LG+T E+ + P+
Sbjct: 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFVGTPYWMA 118
++ GL +LH I+RD+K N+LL + G V+++D G A + + + GTP +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 119 PEVILAMDEGQYDGKVDVWSLGIT 142
PE++L +YD VD ++LG+T
Sbjct: 358 PELLLGE---EYDFSVDYFALGVT 378
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ GL +LH I+RD+K N+LL + G V++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 675 TGTVKL 680
K+
Sbjct: 183 NLVCKV 188
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 21 VDPHTYEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 79
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 80 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD--- 132
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 133 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 163
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 224 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 262
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 263 EGYRLPPP---MDCPAALYQL 280
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 154
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 155 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 215 TSPEAIAYR---KFTSASDVWSYGI 236
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 180
Query: 675 TGTVKL 680
K+
Sbjct: 181 NLVCKV 186
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
LLR +HPN I + Y +LV E G + ++ E E + + + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 67 LNYLHSLGRIHRDVKAGNIL-LTETGT---VKLADFGSASIKCPANSFVGTPYW----MA 118
+ YLHS G +HRD+K NIL + E+G +++ DFG A N + TP + +A
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV + YD D+WSLGI
Sbjct: 194 PEV---LKRQGYDEGCDIWSLGI 213
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 174 SFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIR-FLRQLKHPNTIEYRGCYL 232
+ G Y+ C R + M Y K + D +EI LR +HPN I + Y
Sbjct: 34 TIGVGSYSEC--KRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYD 91
Query: 233 RDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPL 292
+LV E G + +++ + K F+E A F
Sbjct: 92 DGKHVYLVTELMRGGE-----------------LLDKILRQKFFSEREASF--------- 125
Query: 293 KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL-LTETGT---VKLADFGSASIKCPA 348
+ + + + YLHS G +HRD+K NIL + E+G +++ DFG A
Sbjct: 126 -------VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 349 NSFVGTPYW----MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
N + TP + +APEV + YD D+WSLGI + P+ N
Sbjct: 179 NGLLMTPCYTANFVAPEV---LKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+ ++ E E + + + + + YLHS G +HRD+K NIL +
Sbjct: 113 LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVD 156
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 65 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ T VKL DFG + + + + WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 184 I---NFRRFTSASDVWMFGV 200
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 46/228 (20%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 16 RCIGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 226 EYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ G + ++ W++ME C LG ++V R+F ++ L+
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQV----RKFSLD------------LASLILYA 117
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
+++ L YL S +HRD+ A N+L++ T VKL DFG +
Sbjct: 118 YQLST-----------------ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY 160
Query: 345 KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE I + ++ DVW G+ E+
Sbjct: 161 MEDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 205
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 146
Query: 675 TGTVKL 680
T VKL
Sbjct: 147 TDCVKL 152
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 294 EEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASIKCPANS 350
E E + I + + YLHS+ HRDVK N+L T +KL DFG A NS
Sbjct: 160 EREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 351 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMS 401
TPY++APEV + +YD D WSLG+ L PP+++ + ++
Sbjct: 220 LTTPCYTPYYVAPEV---LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLA 270
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 31 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
L++ CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 88 TE---TGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
T +KL DFG A NS TPY++APEV + +YD D WSLG+
Sbjct: 195 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV---LGPEKYDKSCDXWSLGV 251
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 616 LVMEYCLGSASDIIEVHKR---PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
L++ CL + R E E + I + + YLHS+ HRDVK N+L
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 673 T-ETGTVKLDTPDEQAGNDSSKSNSITS 699
T + L D +++ NS+T+
Sbjct: 195 TSKRPNAILKLTDFGFAKETTSHNSLTT 222
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK 220
E F D R +G G FG V+ + + ++ A KK++ + + + + E + L ++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 221 HPNTIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
H+ ++V + Y + +D+ V I + G R
Sbjct: 243 --------------HSRFIVSLAYAFETKTDLCLVMTI-----MNGGDIR---------- 273
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
+ ++N + +E + ++ GL +LH I+RD+K N+LL + G V+++D
Sbjct: 274 YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 340 GSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A + + + GTP +MAPE++L +YD VD ++LG+T E+ + P+
Sbjct: 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFVGTPYWMA 118
++ GL +LH I+RD+K N+LL + G V+++D G A + + + GTP +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 119 PEVILAMDEGQYDGKVDVWSLGIT 142
PE++L +YD VD ++LG+T
Sbjct: 358 PELLLGE---EYDFSVDYFALGVT 378
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ GL +LH I+RD+K N+LL + G V++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK 220
E F D R +G G FG V+ + + ++ A KK++ + + + + E + L ++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 221 HPNTIEYRGCYLRDHTAWLV-MEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
H+ ++V + Y + +D+ V I + G R
Sbjct: 243 --------------HSRFIVSLAYAFETKTDLCLVMTI-----MNGGDIR---------- 273
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
+ ++N + +E + ++ GL +LH I+RD+K N+LL + G V+++D
Sbjct: 274 YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
Query: 340 GSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G A + + + GTP +MAPE++L +YD VD ++LG+T E+ + P+
Sbjct: 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----SIKCPANSFVGTPYWMA 118
++ GL +LH I+RD+K N+LL + G V+++D G A + + + GTP +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 119 PEVILAMDEGQYDGKVDVWSLGIT 142
PE++L +YD VD ++LG+T
Sbjct: 358 PELLLGE---EYDFSVDYFALGVT 378
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ GL +LH I+RD+K N+LL + G V++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P + + ++ +G+G FG V+ VAIK + G E L+E + ++
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMG-TWNGNTKVAIKTLK-PGTMSPE---SFLEEAQIMK 59
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+LKH ++ + + ++V EY GS D ++ +G G
Sbjct: 60 KLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLK----------DGEG--------- 99
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
R LK + + + V G+ Y+ + IHRD+++ NIL+ K+
Sbjct: 100 -------------RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKI 146
Query: 337 ADFGSASI----KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER- 390
ADFG A + + A P W APE L G++ K DVWS GI EL +
Sbjct: 147 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKG 203
Query: 391 KPPYFNMNAMSALYHIAQN-DTPCLQ 415
+ PY MN L + + PC Q
Sbjct: 204 RVPYPGMNNREVLEQVERGYRMPCPQ 229
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDII-EVHKRPLKEEEIAAICSG 62
+ ++++LKH ++ + + ++V EY GS D + + R LK + + +
Sbjct: 55 AQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
V G+ Y+ + IHRD+++ NIL+ K+ADFG A + + A P W
Sbjct: 114 VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 174 APEAALY---GRFTIKSDVWSFGI 194
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 616 LVMEYC-LGSASDII-EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+V EY GS D + + R LK + + + V G+ Y+ + IHRD+++ NIL+
Sbjct: 80 IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV 138
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
K P + C+ + VMEY G I +V + KE + + GL +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFF 457
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK----CPANSFVGTPYWMAPEVILAM 125
L S G I+RD+K N++L G +K+ADFG F GTP ++APE+I
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 126 DEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV 185
G+ VD W+ G+ + + F+ ED +++F+ + E V Y + +
Sbjct: 518 PYGK---SVDWWAFGVLLYEMLAGQAP--FEGEDEDELFQSIME------HNVAYPKSM- 565
Query: 186 SREIVAIKK---MSYLGKQ--CAEKWADILKEIRFLRQL 219
S+E VAI K + GK+ C + +KE F R +
Sbjct: 566 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 47/239 (19%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLR-QL 219
F L +G GSFG V + + E+ A+K L K + D+ + E R L
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVK---ILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
K P + C+ + VMEY G D++ +H+ QQ+ F E
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGG--DLM--------YHI-------QQVGRFKEP 442
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
A+F EIA GL +L S G I+RD+K N++L G +K+ADF
Sbjct: 443 HAVFY---------AAEIAI-------GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF 486
Query: 340 GSASIK----CPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
G F GTP ++APE+I G+ VD W+ G+ E+ + P+
Sbjct: 487 GMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPF 542
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
VMEY G I +V + KE + + GL +L S G I+RD+K N++L
Sbjct: 419 FVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 674 ETGTVKL 680
G +K+
Sbjct: 477 SEGHIKI 483
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 75 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 105
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 106 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 162
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 163 DDEYTSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 219
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 220 ETAEHIAQ 227
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 61 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 120
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 121 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 181 PEVLMY---SKFSSKSDIWAFGV 200
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDTPDEQAGNDSSKSN 695
+ +++ +C V + YL S +HRD+ A N L+ + G VK+ +D S
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV--------SDFGLSR 159
Query: 696 SITSEHSVQSVG 707
+ + SVG
Sbjct: 160 YVLDDEYTSSVG 171
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 125/354 (35%), Gaps = 95/354 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 111
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NI+++ T VK+ DFG A +
Sbjct: 112 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 398 NAMSALY-HIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTPCLQ 456
+ S Y H+ ++ P P +
Sbjct: 223 SPDSVAYQHVREDPIP----------------------------------------PSAR 242
Query: 457 SSDWSDTFAHFVSSCLAKNPADRPSSGRLLTHDLV-----TRPRSPSVLVDLIR 505
S V LAKNP +R + + DLV P +P VL D R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI+++
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 206
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI++
Sbjct: 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 673 TETGTVK-LDTPDEQAGNDSSKSNSITSEHSV 703
+ T VK +D +A DS NS+T +V
Sbjct: 150 SATNAVKVMDFGIARAIADS--GNSVTQTAAV 179
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 69 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 99
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 100 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S VG+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 214 ETAEHIAQ 221
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 55 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S VG+ + W
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 175 PEVLMY---SKFSSKSDIWAFGV 194
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLDT 682
G + + + + +++ +C V + YL S +HRD+ A N L+ + G VK+
Sbjct: 89 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV-- 146
Query: 683 PDEQAGNDSSKSNSITSEHSVQSVG 707
+D S + + SVG
Sbjct: 147 ------SDFGLSRYVLDDEYTSSVG 165
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 52/267 (19%)
Query: 168 REIGHGSFGAVYYARCLVSRE-----IVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KH 221
+ +G G+FG V A ++ VA+K + A ++ ++ E++ L + H
Sbjct: 33 KSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK--EGATASEYKALMTELKILTHIGHH 90
Query: 222 PNTIEYRG-CYLRDHTAWLVMEYC--------LGSASDIIEVH---WIEREFHVEGMGNR 269
N + G C + +++EYC L S D+ ++ + E E M
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPG 150
Query: 270 LQQLK-------CFTEHFALFNFE----------------VHKRPLKEEEIAAICSGVLR 306
L+Q K +E FA F+ +K P+ E++ + V R
Sbjct: 151 LEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVAR 210
Query: 307 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY----WMAP 360
G+ +L S IHRD+ A NILL+E VK+ DFG A K P G WMAP
Sbjct: 211 GMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP 270
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E I + Y K DVWS G+ E+
Sbjct: 271 ESIF---DKIYSTKSDVWSYGVLLWEI 294
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 46 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 103
+K P+ E++ + V RG+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 191 FYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 104 KCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y K DVWS G+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIF---DKIYSTKSDVWSYGV 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 631 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+K P+ E++ + V RG+ +L S IHRD+ A NILL+E VK+
Sbjct: 191 FYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKI 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 104/270 (38%), Gaps = 53/270 (19%)
Query: 143 PGSLKDPEIA-ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--KMS 196
P + +DP A F KE R IG G FG V R + RE+ VAIK K+
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG 61
Query: 197 YLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHW 256
Y KQ D L E + Q HPN I G + +V EY + D
Sbjct: 62 YTEKQRR----DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF---- 113
Query: 257 IEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 316
LK F + ++ + G+ G+ YL +G
Sbjct: 114 ----------------LKKNDGQFTVI------------QLVGMLRGISAGMKYLSDMGY 145
Query: 317 IHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFV----GTPY-WMAPEVILAMDEG 369
+HRD+ A NIL+ K++DFG + + P ++ P W APE I
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR--- 202
Query: 370 QYDGKVDVWSLGITCIELAER-KPPYFNMN 398
++ DVWS GI E+ + PY+ M
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS ++ + ++ + G+
Sbjct: 74 ASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGI 133
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFV----GTPY-W 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ P W
Sbjct: 134 SAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I ++ DVWS GI
Sbjct: 194 TAPEAIAFR---KFTSASDVWSYGIV 216
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL +G +HRD+ A NIL+ K+
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKV 165
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVK 335
T H L +F R + I+ + R + ++HSLG HRD+K N+L+ ++ T+K
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182
Query: 336 LADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 392
L DFGSA P+ V + ++ APE++L E Y +D+WS+G EL KP
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE--YTPSIDLWSIGCVFGELILGKP 240
Query: 393 PYFNMNAMSALYHIAQ 408
+ ++ L I Q
Sbjct: 241 LFSGETSIDQLVRIIQ 256
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 31 LVMEYCLGSASDIIEVH---KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
++MEY + +++ R + I+ + R + ++HSLG HRD+K N+L+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 88 -TETGTVKLADFGSASIKCPANSFVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
++ T+KL DFGSA P+ V + ++ APE++L E Y +D+WS+G
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE--YTPSIDLWSIGCVF 232
Query: 144 GSL 146
G L
Sbjct: 233 GEL 235
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 615 QLVMEYCLGSASDIIEVH---KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
++MEY + +++ R + I+ + R + ++HSLG HRD+K N+L
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 672 L-TETGTVKL 680
+ ++ T+KL
Sbjct: 174 VNSKDNTLKL 183
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLRQL-K 220
+ +G G+FG V A + +E V + + L EK +D++ E+ ++ + K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 221 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
H N I G +D ++++ Y GN + L+
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYA--------------------SKGNLREYLRARRPPG 139
Query: 281 ALFNFEVHKRPLKE---EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
+++++++ P ++ +++ + + RG+ YL S IHRD+ A N+L+TE +K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 338 DFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + T WMAPE + + Y + DVWS G+ E+
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEI 252
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC----------------LGSASDIIEVHKRPLKEEE 55
KH N I G +D ++++ Y + + DI V + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + + RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE + + Y + DVWS G+
Sbjct: 219 GRLPVKWMAPEALF---DRVYTHQSDVWSFGV 247
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
MEY + DI V + + +++ + + RG+ YL S IHRD+ A N+L+TE
Sbjct: 140 MEY----SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
Query: 678 VKL 680
+K+
Sbjct: 196 MKI 198
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 51/281 (18%)
Query: 143 PGSLKDPEIAELFDKEDPEKI--FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGK 200
PGS+ A D+ +++ F+ R G G+FG V + + VAIKK+
Sbjct: 2 PGSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDP 60
Query: 201 QCAEKWADILKEIRFLRQLKHPNTIEYRGCYL-------RDHTAWLVMEYCLGSASDIIE 253
+ + I+++ L L HPN ++ + + RD +VMEY +
Sbjct: 61 RFRNRELQIMQD---LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT------ 111
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLH- 312
+H R ++ + +K F LF ++R + LH
Sbjct: 112 LHRCCRNYYRRQVAPPPILIKVF-----LFQ-------------------LIRSIGCLHL 147
Query: 313 -SLGRIHRDVKAGNILLTET-GTVKLADFGSASIKCPAN---SFVGTPYWMAPEVILAMD 367
S+ HRD+K N+L+ E GT+KL DFGSA P+ +++ + Y+ APE+I
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG-- 205
Query: 368 EGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQ 408
Y VD+WS+G E+ +P + N+ L+ I +
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 11 LKHPNTIEYRGCYL-------RDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIA------ 57
L HPN ++ + + RD +VMEY D + R ++A
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY----VPDTLHRCCRNYYRRQVAPPPILI 131
Query: 58 -AICSGVLRGLNYLH--SLGRIHRDVKAGNILLTET-GTVKLADFGSASIKCPAN---SF 110
++R + LH S+ HRD+K N+L+ E GT+KL DFGSA P+ ++
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ + Y+ APE+I Y VD+WS+G
Sbjct: 192 ICSRYYRAPELIFG--NQHYTTAVDIWSVG 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 41/247 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ L +IG G++G VY A+ E A+KK+ L K+ + ++EI L++LKH N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ LV E+ +++V EG
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--------CEG------------------ 95
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
L+ + +L G+ Y H +HRD+K N+L+ G +K+ADFG A
Sbjct: 96 -------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P + V T ++ AP+V+ M +Y +D+WS+G E+ P + ++
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVL--MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 400 MSALYHI 406
L I
Sbjct: 207 ADQLMRI 213
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++LKH N ++ LV E+ +++V + L+ + +L
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ Y H +HRD+K N+L+ G +K+ADFG A + P + V T ++ AP+V
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 122 ILAMDEGQYDGKVDVWSLG 140
+ M +Y +D+WS+G
Sbjct: 172 L--MGSKKYSTTIDIWSVG 188
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ +++V + L+ + +L G+ Y H +HRD+K N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 676 GTVKL 680
G +K+
Sbjct: 137 GELKI 141
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI---LKEIRFLRQL- 219
F L +G GSFG V + + E+ A+K L K + D+ + E R L
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVK---ILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
K P + C+ + VMEY G D++ +H+ QQ+ F E
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGG--DLM--------YHI-------QQVGRFKEP 121
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
A+F EIA GL +L S G I+RD+K N++L G +K+ADF
Sbjct: 122 HAVFY---------AAEIAI-------GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF 165
Query: 340 GSASIKCPAN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 391
G C N F GTP ++APE+I G+ VD W+ G+ E+ +
Sbjct: 166 GM----CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQ 218
Query: 392 PPY 394
P+
Sbjct: 219 APF 221
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNY 69
K P + C+ + VMEY G I +V + KE + + GL +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFF 136
Query: 70 LHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN--------SFVGTPYWMAPEV 121
L S G I+RD+K N++L G +K+ADFG C N F GTP ++APE+
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGM----CKENIWDGVTTKXFCGTPDYIAPEI 192
Query: 122 ILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYA 181
I G+ VD W+ G+ + + F+ ED +++F+ + E H V Y
Sbjct: 193 IAYQPYGK---SVDWWAFGVLLYEMLAGQAP--FEGEDEDELFQSIME--HN----VAYP 241
Query: 182 RCLVSREIVAIKK---MSYLGKQ--CAEKWADILKEIRFLRQL 219
+ + S+E VAI K + GK+ C + +KE F R +
Sbjct: 242 KSM-SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 616 LVMEYCLGS--ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
VMEY G I +V + KE + + GL +L S G I+RD+K N++L
Sbjct: 98 FVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 674 ETGTVKL 680
G +K+
Sbjct: 156 SEGHIKI 162
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 131/346 (37%), Gaps = 77/346 (22%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILKEI 213
+ +++ E+G G+F V RC+ + +I+ KK+S Q E+ E
Sbjct: 21 QSMYQLFEELGKGAFSVV--RRCVKVLAGQEYAAKIINTKKLSARDHQKLER------EA 72
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R R LKHPN + + +L+ + G
Sbjct: 73 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE------------------------- 107
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---E 330
LF V + E + + +L + + H +G +HRD+K N+LL +
Sbjct: 108 --------LFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLK 159
Query: 331 TGTVKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
VKLADFG A I+ F GTP +++PEV + + Y VD+W+ G+
Sbjct: 160 GAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEV---LRKDPYGKPVDLWACGVILY 215
Query: 386 ELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMNAM 441
L PP+++ + LY + S +W + K + + P + A
Sbjct: 216 ILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAA 274
Query: 442 SALYH--IAQNDT--PCLQSSDWSDTFAHFVSSCLAKNPADRPSSG 483
AL H I+ T C+ + D CL K A R G
Sbjct: 275 EALKHPWISHRSTVASCMHRQETVD--------CLKKFNARRKLKG 312
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKHPN + + +L+ + G DI+ R E A+ C
Sbjct: 72 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV---AREYYSEADASHCIQ 128
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPANS-----FVGT 113
+L + + H +G +HRD+K N+LL + VKLADFG A I+ F GT
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGT 187
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 188 PGYLSPEV---LRKDPYGKPVDLWACGV 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 50/256 (19%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G V+ AR L VA+K + + + +E + L HP +
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 230 CYLRDHTA----WLVMEYCLG-SASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ A ++VMEY G + DI+ H EG
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIV---------HTEG------------------- 128
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-S 343
P+ + + + + LN+ H G IHRDVK NI+++ T VK+ DFG A +
Sbjct: 129 ------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 182
Query: 344 IKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
I NS +GT +++PE D + DV+SLG E+ +PP+
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
Query: 398 NAMSALY-HIAQNDTP 412
+ +S Y H+ ++ P
Sbjct: 240 SPVSVAYQHVREDPIP 255
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 30 WLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI+++
Sbjct: 109 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 89 ETGTVKLADFGSA-SIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
T VK+ DFG A +I NS +GT +++PE D + DV+SLG
Sbjct: 168 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLG 223
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 614 PQLVMEYCLG-SASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +VMEY G + DI+ + P+ + + + + LN+ H G IHRDVK NI++
Sbjct: 108 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 166
Query: 673 TETGTVK-LDTPDEQAGNDSSKSNSITSEHSV 703
+ T VK +D +A DS NS+T +V
Sbjct: 167 SATNAVKVMDFGIARAIADS--GNSVTQTAAV 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 41/247 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ L +IG G++G VY A+ E A+KK+ L K+ + ++EI L++LKH N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ LV E+ +++V EG L+ T L
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--------CEG------GLESVTAKSFLL 107
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+L G+ Y H +HRD+K N+L+ G +K+ADFG A
Sbjct: 108 Q-------------------LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P + V T ++ AP+V+ M +Y +D+WS+G E+ P + ++
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVL--MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSE 206
Query: 400 MSALYHI 406
L I
Sbjct: 207 ADQLMRI 213
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++LKH N ++ LV E+ +++V + L+ + +L
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ Y H +HRD+K N+L+ G +K+ADFG A + P + V T ++ AP+V
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 122 ILAMDEGQYDGKVDVWSLG 140
+ M +Y +D+WS+G
Sbjct: 172 L--MGSKKYSTTIDIWSVG 188
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ +++V + L+ + +L G+ Y H +HRD+K N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 676 GTVKL 680
G +K+
Sbjct: 137 GELKI 141
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 93 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 212 I---NFRRFTSASDVWMFGV 228
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 92/239 (38%), Gaps = 44/239 (18%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEI 213
D E + E R IG G FG V+ +S E A+ K C L+E
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+RQ HP+ ++ G + ++ W++ME C L +L
Sbjct: 91 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCT------------------------LGEL 125
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ F +V K L + + L YL S +HRD+ A N+L++
Sbjct: 126 RSF--------LQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 177
Query: 334 VKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
VKL DFG + + + + WMAPE I + ++ DVW G+ E+
Sbjct: 178 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 233
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 174
Query: 675 TGTVKL 680
VKL
Sbjct: 175 NDCVKL 180
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 41/247 (16%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
+ L +IG G++G VY A+ E A+KK+ L K+ + ++EI L++LKH N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
++ LV E+ +++V EG L+ T L
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--------CEG------GLESVTAKSFLL 107
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA- 342
+L G+ Y H +HRD+K N+L+ G +K+ADFG A
Sbjct: 108 Q-------------------LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNA 399
+ P + + T ++ AP+V+ M +Y +D+WS+G E+ P + ++
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVL--MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 400 MSALYHI 406
L I
Sbjct: 207 ADQLMRI 213
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
S+L++LKH N ++ LV E+ +++V + L+ + +L
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSF---VGTPYWMAPEV 121
G+ Y H +HRD+K N+L+ G +K+ADFG A + P + + T ++ AP+V
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 122 ILAMDEGQYDGKVDVWSLG 140
+ M +Y +D+WS+G
Sbjct: 172 L--MGSKKYSTTIDIWSVG 188
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E+ +++V + L+ + +L G+ Y H +HRD+K N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 676 GTVKL 680
G +K+
Sbjct: 137 GELKI 141
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 445 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 564 I---NFRRFTSASDVWMFGV 580
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 58/258 (22%)
Query: 150 EIAELFDKEDPEKI-----FEDLRE-------IGHGSFGAVYYARCLVSREIVAIKKMSY 197
+ AE+ D+ED + +E RE IG G FG V+ +S E A+
Sbjct: 366 DYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQG-IYMSPENPAMAVAIK 424
Query: 198 LGKQCAEKWA--DILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEV 254
K C L+E +RQ HP+ ++ G + ++ W++ME C LG ++V
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV 483
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
R+F ++ L+ +++ L YL S
Sbjct: 484 ----RKFSLD------------LASLILYAYQLST-----------------ALAYLESK 510
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEG 369
+HRD+ A N+L++ VKL DFG + + + + WMAPE I +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFR 567
Query: 370 QYDGKVDVWSLGITCIEL 387
++ DVW G+ E+
Sbjct: 568 RFTSASDVWMFGVCMWEI 585
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 526
Query: 675 TGTVKL 680
VKL
Sbjct: 527 NDCVKL 532
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 115 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 175 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 228
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 183 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 214
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 103 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 81
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 82 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 121
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 122 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 181
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 238
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 205 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 233
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 184
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 115 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 175 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 228
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 183 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 214
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 103 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 65 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 184 I---NFRRFTSASDVWMFGV 200
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 16 RCIGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ G + ++ W++ME C L +L+ F
Sbjct: 75 KLIGV-ITENPVWIIMELCT------------------------LGELRSF--------L 101
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+V K L + + L YL S +HRD+ A N+L++ VKL DFG +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 346 CPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE I + ++ DVW G+ E+
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 205
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 675 TGTVKL 680
VKL
Sbjct: 147 NDCVKL 152
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 77
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 78 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 117
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 118 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 177
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 234
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 201 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 229
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 180
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 88
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 128
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 129 EPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 245
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 212 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 240
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 191
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 88
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 128
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 129 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 245
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 212 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 240
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 191
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 134/372 (36%), Gaps = 97/372 (26%)
Query: 141 ITPGSLKDPEIA-ELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--K 194
+ P + +DP A F KE + + IG G FG V R V REI VAIK K
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
Y KQ D L E + Q HPN I G + ++ EY + D
Sbjct: 67 AGYTDKQ----RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-- 120
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
L+ F + ++ + G+ G+ YL +
Sbjct: 121 ------------------LRKNDGRFTVI------------QLVGMLRGIGSGMKYLSDM 150
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAMD 367
+HRD+ A NIL+ K++DFG + + P ++ W APE I
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR- 209
Query: 368 EGQYDGKVDVWSLGITCIE-LAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E ++ + PY++M S+ VIK I
Sbjct: 210 --KFTSASDVWSYGIVMWEVMSYGERPYWDM-------------------SNQDVIKAIE 248
Query: 427 STAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRL- 485
PP M+ AL+ + + C K +DRP G++
Sbjct: 249 EGYRLPPP---MDCPIALHQLMLD--------------------CWQKERSDRPKFGQIV 285
Query: 486 -LTHDLVTRPRS 496
+ L+ P S
Sbjct: 286 NMLDKLIRNPNS 297
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + ++ EY GS + + ++ + G+
Sbjct: 81 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 140
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL + +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 141 GSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 200
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I ++ DVWS GI
Sbjct: 201 TAPEAIAYR---KFTSASDVWSYGIV 223
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKV 172
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 67 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 186 I---NFRRFTSASDVWMFGV 202
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 18 RCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ G + ++ W++ME C L +L+ F
Sbjct: 77 KLIGV-ITENPVWIIMELCT------------------------LGELRSF--------L 103
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+V K L + + L YL S +HRD+ A N+L++ VKL DFG +
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 346 CPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE I + ++ DVW G+ E+
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 207
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 148
Query: 675 TGTVKL 680
VKL
Sbjct: 149 NDCVKL 154
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 135 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 195 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 248
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 202
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 203 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 234
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 123 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 65 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 184 I---NFRRFTSASDVWMFGV 200
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 16 RCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ G + ++ W++ME C L +L+ F
Sbjct: 75 KLIGV-ITENPVWIIMELCT------------------------LGELRSF--------L 101
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+V K L + + L YL S +HRD+ A N+L++ VKL DFG +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 346 CPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE I + ++ DVW G+ E+
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 205
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 675 TGTVKL 680
VKL
Sbjct: 147 NDCVKL 152
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 72/261 (27%)
Query: 147 KDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQC 202
+DP I E E+ + + ++G G+FG+V R + +VA+K++ + G
Sbjct: 2 QDPTIFE-------ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--- 51
Query: 203 AEKWADILKEIRFLRQLKHPNTIEYRGCYLRD--HTAWLVMEY----CLGSASDIIEVHW 256
++ D +EI+ L+ L ++YRG + LVMEY CL
Sbjct: 52 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL----------- 100
Query: 257 IEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 316
R+F + H+ L + S + +G+ YL S
Sbjct: 101 --RDF-----------------------LQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 317 IHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAM 366
+HRD+ A NIL+ VK+ADFG A ++ P S + +W APE ++
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE---SL 189
Query: 367 DEGQYDGKVDVWSLGITCIEL 387
+ + + DVWS G+ EL
Sbjct: 190 SDNIFSRQSDVWSFGVVLYEL 210
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L ++YRG + LVMEY G D ++ H+ L + S +
Sbjct: 64 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGT 113
+G+ YL S +HRD+ A NIL+ VK+ADFG A ++ P S +
Sbjct: 124 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-- 181
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ + + + DVWS G+
Sbjct: 182 -FWYAPE---SLSDNIFSRQSDVWSFGVV 206
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S +LVMEY G D ++ H+ L + S + +G+ YL S +HRD+ A NIL
Sbjct: 87 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 672 LTETGTVKL 680
+ VK+
Sbjct: 147 VESEAHVKI 155
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 62 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 181 I---NFRRFTSASDVWMFGV 197
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 13 RCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 226 EYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNF 285
+ G + ++ W++ME C L +L+ F
Sbjct: 72 KLIGV-ITENPVWIIMELCT------------------------LGELRSF--------L 98
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+V K L + + L YL S +HRD+ A N+L++ VKL DFG +
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 346 CPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE I + ++ DVW G+ E+
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 202
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 143
Query: 675 TGTVKL 680
VKL
Sbjct: 144 NDCVKL 149
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 70 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 189 I---NFRRFTSASDVWMFGV 205
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 92/239 (38%), Gaps = 44/239 (18%)
Query: 156 DKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEI 213
D E + E R IG G FG V+ +S E A+ K C L+E
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
+RQ HP+ ++ G + ++ W++ME C L +L
Sbjct: 68 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCT------------------------LGEL 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ F +V K L + + L YL S +HRD+ A N+L++
Sbjct: 103 RSF--------LQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 154
Query: 334 VKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
VKL DFG + + + + WMAPE I + ++ DVW G+ E+
Sbjct: 155 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 210
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 151
Query: 675 TGTVKL 680
VKL
Sbjct: 152 NDCVKL 157
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 116 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 175
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 176 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 229
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 183
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 184 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 215
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 104 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 68 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + + + + WMAPE
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 187 I---NFRRFTSASDVWMFGV 203
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 98/251 (39%), Gaps = 52/251 (20%)
Query: 144 GSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCA 203
GS +D EI E+I E R IG G FG V+ +S E A+ K C
Sbjct: 3 GSTRDYEIQR-------ERI-ELGRCIGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCT 53
Query: 204 EKWA--DILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREF 261
L+E +RQ HP+ ++ G + ++ W++ME C
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCT---------------- 96
Query: 262 HVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 321
L +L+ F +V K L + + L YL S +HRD+
Sbjct: 97 --------LGELRSF--------LQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 140
Query: 322 KAGNILLTETGTVKLADFGSASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVD 376
A N+L++ VKL DFG + + + + WMAPE I + ++ D
Sbjct: 141 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRRFTSASD 197
Query: 377 VWSLGITCIEL 387
VW G+ E+
Sbjct: 198 VWMFGVCMWEI 208
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 149
Query: 675 TGTVKL 680
VKL
Sbjct: 150 NDCVKL 155
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSA 342
+F+V L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A
Sbjct: 114 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Query: 343 SIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
P + V + Y+ PE+++ + + YD +D+WSLG + RK P+F
Sbjct: 174 EFYHPGKEYNVRVASRYFKGPELLVDLQD--YDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 109
L + +I +L+ L+Y HS G +HRDVK N+++ E ++L D+G A P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 110 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
+ V + Y+ PE+++ + + YD +D+WSLG
Sbjct: 182 YNVRVASRYFKGPELLVDLQD--YDYSLDMWSLG 213
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P L+ EY + ++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 102 TPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 80
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 81 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 120
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 121 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 180
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 237
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 204 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 232
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 183
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 72/261 (27%)
Query: 147 KDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQC 202
+DP I E E+ + + ++G G+FG+V R + +VA+K++ + G
Sbjct: 3 QDPTIFE-------ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--- 52
Query: 203 AEKWADILKEIRFLRQLKHPNTIEYRGCYLRD--HTAWLVMEY----CLGSASDIIEVHW 256
++ D +EI+ L+ L ++YRG + LVMEY CL
Sbjct: 53 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL----------- 101
Query: 257 IEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR 316
R+F + H+ L + S + +G+ YL S
Sbjct: 102 --RDF-----------------------LQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 317 IHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAM 366
+HRD+ A NIL+ VK+ADFG A ++ P S + +W APE ++
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE---SL 190
Query: 367 DEGQYDGKVDVWSLGITCIEL 387
+ + + DVWS G+ EL
Sbjct: 191 SDNIFSRQSDVWSFGVVLYEL 211
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+L+ L ++YRG + LVMEY G D ++ H+ L + S +
Sbjct: 65 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 124
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS----------IKCPANSFVGT 113
+G+ YL S +HRD+ A NIL+ VK+ADFG A ++ P S +
Sbjct: 125 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-- 182
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ + + + DVWS G+
Sbjct: 183 -FWYAPE---SLSDNIFSRQSDVWSFGVV 207
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S +LVMEY G D ++ H+ L + S + +G+ YL S +HRD+ A NIL
Sbjct: 88 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 672 LTETGTVKL 680
+ VK+
Sbjct: 148 VESEAHVKI 156
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 350
L + +I +L+ L+Y HS G +HRDVK N+++ + ++L D+G A PA
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 188
Query: 351 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ V + Y+ PE+++ D YD +D+WSLG + R+ P+F+
Sbjct: 189 YNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRREPFFH 235
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV EY + +D ++++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 109 TPALVFEYI--NNTDFKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
+ ++L D+G A PA + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 166 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 223
Query: 144 GSL 146
S+
Sbjct: 224 ASM 226
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV EY + +D ++++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 109 TPALVFEYI--NNTDFKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 38/254 (14%)
Query: 169 EIGHGSFGAVYYARC--LVSRE---IVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
E+G G+FG V+ A C L+ + +VA+K + + + D +E L L+H +
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQH 104
Query: 224 TIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ + G +V EY G + + H + + G
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE---------------- 148
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-S 341
+V PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S
Sbjct: 149 ---DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Query: 342 ASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-AERKPPYF 395
I VG WM PE IL ++ + DVWS G+ E+ K P++
Sbjct: 206 RDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVVLWEIFTYGKQPWY 262
Query: 396 NMNAMSALYHIAQN 409
++ A+ I Q
Sbjct: 263 QLSNTEAIDCITQG 276
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH--------------KR 49
+ LL L+H + + + G +V EY G + + H
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPAN 108
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S I
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 109 SFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VG WM PE IL ++ + DVWS G+
Sbjct: 214 YRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVV 249
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 635 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 129
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY GN + L+
Sbjct: 130 MIGKHKNIINLLGACTQDGPLYVIVEYA--------------------SKGNLREYLQAR 169
Query: 277 TEHFALFNFEVHKRP---LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+++ P L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 170 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 229
Query: 334 VKLADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+K+ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 253 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 281
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-ETGTVKLADFGSASIKCPANS 350
L + +I +L+ L+Y HS G +HRDVK N+++ + ++L D+G A PA
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 193
Query: 351 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ V + Y+ PE+++ D YD +D+WSLG + R+ P+F+
Sbjct: 194 YNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 28 TAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
T LV EY + +D ++++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 114 TPALVFEYI--NNTDFKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
Query: 88 T-ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITP 143
+ ++L D+G A PA + V + Y+ PE+++ D YD +D+WSLG
Sbjct: 171 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCML 228
Query: 144 GSL 146
S+
Sbjct: 229 ASM 231
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 613 SPQLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+P LV EY + +D ++++ L + +I +L+ L+Y HS G +HRDVK N+++
Sbjct: 114 TPALVFEYI--NNTDFKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 48/272 (17%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARC--LVSRE---IVAIKKMSYLGKQCAEKWADILKE 212
E P E +R+IG G+FG V+ AR L+ E +VA+K + + A+ AD +E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK--EEASADMQADFQRE 100
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + +PN ++ G L+ EY G+ +
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM--------------------AYGDLNEF 140
Query: 273 LKCFTEH--FALFNFEVHKR---------PLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 321
L+ + H +L + ++ R PL E I V G+ YL +HRD+
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200
Query: 322 KAGNILLTETGTVKLADFGSASIKCPANSFV-----GTPY-WMAPEVILAMDEGQYDGKV 375
N L+ E VK+ADFG + A+ + P WM PE I +Y +
Sbjct: 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY---NRYTTES 257
Query: 376 DVWSLGITCIELAERK-PPYFNMNAMSALYHI 406
DVW+ G+ E+ PY+ M +Y++
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS 109
PL E I V G+ YL +HRD+ N L+ E VK+ADFG + A+
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 110 FV-----GTPY-WMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ P WM PE I +Y + DVW+ G+
Sbjct: 230 YKADGNDAIPIRWMPPESIFY---NRYTTESDVWAYGVV 265
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 56/243 (23%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
++ + +R++G G FG V R + E VA+K + + AD+ KEI L
Sbjct: 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PESGGNHIADLKKEIEIL 77
Query: 217 RQLKHPNTIEYRGCYLRD--HTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
R L H N ++Y+G D + L+ME+ L S S ++ + + + + N QQLK
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEF-LPSGS--LKEYLPKNKNKI----NLKQQLK 130
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
+A+ IC +G++YL S +HRD+ A N+L+ V
Sbjct: 131 -----YAV----------------QIC----KGMDYLGSRQYVHRDLAARNVLVESEHQV 165
Query: 335 KLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 384
K+ DFG ++K +S V +W APE ++ + ++ DVWS G+T
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPV---FWYAPECLM---QSKFYIASDVWSFGVTL 219
Query: 385 IEL 387
EL
Sbjct: 220 HEL 222
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H N ++Y+G D + L+ME+ GS + + +K + ++ +
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G++YL S +HRD+ A N+L+ VK+ DFG ++K +S V
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV-- 193
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ + ++ DVWS G+T
Sbjct: 194 -FWYAPECLM---QSKFYIASDVWSFGVT 218
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+ME+ GS + + +K + ++ + +G++YL S +HRD+ A N+L+
Sbjct: 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
Query: 674 ETGTVKL 680
VK+
Sbjct: 161 SEHQVKI 167
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+RQ HP+ ++ G + ++ W++ME C LG ++V K L + +
Sbjct: 65 MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-----SIKCPANSFVGTPYWMAPEV 121
L YL S +HRD+ A N+L++ VKL DFG + S A+ WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 122 ILAMDEGQYDGKVDVWSLGI 141
I + ++ DVW G+
Sbjct: 184 I---NFRRFTSASDVWMFGV 200
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 46/228 (20%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKHPNTI 225
R IG G FG V+ +S E A+ K C L+E +RQ HP+ +
Sbjct: 16 RCIGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 226 EYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ G + ++ W++ME C LG ++V R+F ++ L+
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQV----RKFSLD------------LASLILYA 117
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-- 342
+++ L YL S +HRD+ A N+L++ VKL DFG +
Sbjct: 118 YQLST-----------------ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 160
Query: 343 ---SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
S A+ WMAPE I + ++ DVW G+ E+
Sbjct: 161 MEDSTXXKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEI 205
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME C LG ++V K L + + L YL S +HRD+ A N+L++
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 675 TGTVKL 680
VKL
Sbjct: 147 NDCVKL 152
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 103/255 (40%), Gaps = 50/255 (19%)
Query: 168 REIGHGSFGAVYYARCL---VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
R IG G FG VY+ + +R AIK +S + + ++ L+E +R L HPN
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLNHPNV 84
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
+ G L EG+ + L C H L
Sbjct: 85 LALIGIMLPP-----------------------------EGLPHVLLPYMC---HGDLLQ 112
Query: 285 F-EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
F +R +++ + V RG+ YL +HRD+ A N +L E+ TVK+ADFG A
Sbjct: 113 FIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
Query: 344 -------IKCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPY 394
+ P W A E ++ ++ K DVWS G+ EL R PPY
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALE---SLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
Query: 395 FNMNAMSALYHIAQN 409
+++ + +AQ
Sbjct: 230 RHIDPFDLTHFLAQG 244
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLR-DHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAICSGVL 64
L+R L HPN + G L + +++ Y C G I +R +++ + V
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-------IKCPANSFVGTPY-W 116
RG+ YL +HRD+ A N +L E+ TVK+ADFG A + P W
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
A E ++ ++ K DVWS G+
Sbjct: 195 TALE---SLQTYRFTTKSDVWSFGV 216
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 614 PQLVMEY-CLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
P +++ Y C G I +R +++ + V RG+ YL +HRD+ A N +L
Sbjct: 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157
Query: 673 TETGTVKL 680
E+ TVK+
Sbjct: 158 DESFTVKV 165
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 121/321 (37%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V E + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V E GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
GS + H ++ + G+ G+ YL +G +HRD+ A NIL+ K+
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKV 188
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 108/290 (37%), Gaps = 72/290 (24%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
+G G FG V R + +EI VAIK K+ Y KQ D L E + Q HPN
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNI 96
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G + +V EY + D +H A F
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLD-----------------------SFLRKHDAQFT 133
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + G+ G+ YL +G +HRD+ A NIL+ K++DFG + +
Sbjct: 134 VI---------QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 184
Query: 345 --KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ W +PE I ++ DVWS GI E+
Sbjct: 185 LEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVLWEV---------- 231
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHI 447
++ + P + S+ VIK + PP M+ +ALY +
Sbjct: 232 --------MSYGERPYWEMSNQDVIKAVDEGYRLPPP---MDCPAALYQL 270
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 144
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
+PE I ++ DVWS GI
Sbjct: 205 TSPEAIAYR---KFTSASDVWSYGIV 227
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
Query: 675 TGTVKL 680
K+
Sbjct: 171 NLVCKV 176
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 108/290 (37%), Gaps = 72/290 (24%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
+G G FG V R + +EI VAIK K+ Y KQ D L E + Q HPN
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNI 79
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G + +V EY + D +H A F
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLD-----------------------SFLRKHDAQFT 116
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + G+ G+ YL +G +HRD+ A NIL+ K++DFG + +
Sbjct: 117 VI---------QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 345 --KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ W +PE I ++ DVWS GI E+
Sbjct: 168 LEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVLWEV---------- 214
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHI 447
++ + P + S+ VIK + PP M+ +ALY +
Sbjct: 215 --------MSYGERPYWEMSNQDVIKAVDEGYRLPPP---MDCPAALYQL 253
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V EY GS + H ++ + G+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
+PE I ++ DVWS GI
Sbjct: 188 TSPEAIAYR---KFTSASDVWSYGIV 210
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 616 LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+V EY GS + H ++ + G+ G+ YL +G +HRD+ A NIL+
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 675 TGTVKL 680
K+
Sbjct: 154 NLVCKV 159
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 38/254 (14%)
Query: 169 EIGHGSFGAVYYARC--LVSRE---IVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
E+G G+FG V+ A C L+ + +VA+K + + + D +E L L+H +
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQH 75
Query: 224 TIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ + G +V EY G + + H + + G
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE---------------- 119
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-S 341
+V PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S
Sbjct: 120 ---DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Query: 342 ASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYF 395
I VG WM PE IL ++ + DVWS G+ E+ K P++
Sbjct: 177 RDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVVLWEIFTYGKQPWY 233
Query: 396 NMNAMSALYHIAQN 409
++ A+ I Q
Sbjct: 234 QLSNTEAIDCITQG 247
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH--------------KR 49
+ LL L+H + + + G +V EY G + + H
Sbjct: 65 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPAN 108
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S I
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
Query: 109 SFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VG WM PE IL ++ + DVWS G+
Sbjct: 185 YRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVV 220
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 635 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 170
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 130/344 (37%), Gaps = 72/344 (20%)
Query: 159 DPEKIFEDLREIGHGSFGAVYYARCL-------VSREIVAIKKMSYLGKQCAEKWADILK 211
D +++ED IG G+F V RC+ + +I+ KK+S Q E+
Sbjct: 4 DEYQLYED---IGKGAFSVV--RRCVKLCTGHEYAAKIINTKKLSARDHQKLER------ 52
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E R R LKH N + + +LV + G
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGE----------------------- 89
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT-- 329
LF V + E + + +L + + H +G +HRD+K N+LL
Sbjct: 90 ----------LFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 139
Query: 330 -ETGTVKLADFGSASIKCPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
+ VKLADFG A I+ + F GTP +++PEV + + Y VD+W+ G+
Sbjct: 140 CKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEV---LRKEAYGKPVDIWACGVI 195
Query: 384 CIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVI----KTISSTAERKPPYFNMN 439
L PP+++ + LY + S +W + K + + P +
Sbjct: 196 LYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 254
Query: 440 AMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSG 483
A AL H C +S+ S CL K A R G
Sbjct: 255 AHEALKH----PWVCQRSTVASMMHRQETVECLKKFNARRKLKG 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAIC-S 61
+ + R LKH N + + +LV + G DI+ R E A+ C
Sbjct: 54 ARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQ 110
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPANS-----FVGT 113
+L + + H +G +HRD+K N+LL + VKLADFG A I+ + F GT
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGT 169
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
P +++PEV + + Y VD+W+ G+
Sbjct: 170 PGYLSPEV---LRKEAYGKPVDIWACGV 194
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 58/244 (23%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
++ + +R++G G FG V R + E VA+K + + AD+ KEI L
Sbjct: 8 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PESGGNHIADLKKEIEIL 65
Query: 217 RQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQL 273
R L H N ++Y+G D + L+ME+ GS + + + + N QQL
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN--------KNKINLKQQL 117
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
K +A+ IC +G++YL S +HRD+ A N+L+
Sbjct: 118 K-----YAV----------------QIC----KGMDYLGSRQYVHRDLAARNVLVESEHQ 152
Query: 334 VKLADFG----------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
VK+ DFG ++K +S V +W APE ++ + ++ DVWS G+T
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPV---FWYAPECLM---QSKFYIASDVWSFGVT 206
Query: 384 CIEL 387
EL
Sbjct: 207 LHEL 210
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRD--HTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGV 63
+LR L H N ++Y+G D + L+ME+ GS + + +K + ++ +
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 123
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----------SASIKCPANSFVGT 113
+G++YL S +HRD+ A N+L+ VK+ DFG ++K +S V
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV-- 181
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+W APE ++ + ++ DVWS G+T
Sbjct: 182 -FWYAPECLM---QSKFYIASDVWSFGVT 206
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+L+ME+ GS + + +K + ++ + +G++YL S +HRD+ A N+L+
Sbjct: 89 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 148
Query: 674 ETGTVKL 680
VK+
Sbjct: 149 SEHQVKI 155
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 38/254 (14%)
Query: 169 EIGHGSFGAVYYARC--LVSRE---IVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
E+G G+FG V+ A C L+ + +VA+K + + + D +E L L+H +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQH 81
Query: 224 TIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ + G +V EY G + + H + + G
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE---------------- 125
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-S 341
+V PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S
Sbjct: 126 ---DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Query: 342 ASIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYF 395
I VG WM PE IL ++ + DVWS G+ E+ K P++
Sbjct: 183 RDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVVLWEIFTYGKQPWY 239
Query: 396 NMNAMSALYHIAQN 409
++ A+ I Q
Sbjct: 240 QLSNTEAIDCITQG 253
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH--------------KR 49
+ LL L+H + + + G +V EY G + + H
Sbjct: 71 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPAN 108
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+ DFG S I
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
Query: 109 SFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VG WM PE IL ++ + DVWS G+
Sbjct: 191 YRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVV 226
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 635 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
PL ++ A+ S V G+ YL L +HRD+ N L+ + VK+
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 176
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 42/237 (17%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 88
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY S ++ E R +E C+
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEY--ASKGNLREYLQARRPPGLE---------YCY 137
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 138 NPSHN------PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 337 ADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 245
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 212 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 240
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
+EYC + + E L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 133 LEYCYNPSHNPEE----QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 678 VKL 680
+K+
Sbjct: 189 MKI 191
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 61/251 (24%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILK--EIRFLRQLKH 221
FE L+ IG G+F V + + ++ A+K M+ KW D+LK E+ R+ +
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN--------KW-DMLKRGEVSCFREERD 113
Query: 222 PNTIEYRGCYLRDHTA-------WLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLK 274
R + H A +LVMEY +G G+ L L
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVG--------------------GDLLTLLS 153
Query: 275 CFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTV 334
F E E+ + L E ++ ++ +H LG +HRD+K NILL G +
Sbjct: 154 KFGERIPA---EMARFYLAE---------IVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201
Query: 335 KLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDG----KVDVWSLGITC 384
+LADFGS +K A+ VGTP +++PE++ A+ G G + D W+LG+
Sbjct: 202 RLADFGSC-LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260
Query: 385 IELAERKPPYF 395
E+ + P++
Sbjct: 261 YEMFYGQTPFY 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 30 WLVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
+LVMEY +G ++ + E + ++ ++ +H LG +HRD+K NILL
Sbjct: 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
Query: 89 ETGTVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDG----KVDVWS 138
G ++LADFGS +K A+ VGTP +++PE++ A+ G G + D W+
Sbjct: 197 RCGHIRLADFGSC-LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255
Query: 139 LGI 141
LG+
Sbjct: 256 LGV 258
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 616 LVMEYCLGS-ASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVMEY +G ++ + E + ++ ++ +H LG +HRD+K NILL
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 675 TGTVKL 680
G ++L
Sbjct: 198 CGHIRL 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 46/248 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+E+G G FG V Y + + VAIK + K+ + + ++E + + L H ++
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G + +++ EY + N L++++
Sbjct: 69 LYGVCTKQRPIFIITEYMANGC-----------------LLNYLREMR------------ 99
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--I 344
H+ + +++ +C V + YL S +HRD+ A N L+ + G VK++DFG + +
Sbjct: 100 -HR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 345 KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAM 400
S G+ + W PEV++ ++ K D+W+ G+ E+ K PY
Sbjct: 157 DDEYTSSRGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 401 SALYHIAQ 408
HIAQ
Sbjct: 214 ETAEHIAQ 221
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+ ++ L H ++ G + +++ EY G + + + + +++ +C V
Sbjct: 55 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS--IKCPANSFVGTPY---WMA 118
+ YL S +HRD+ A N L+ + G VK++DFG + + S G+ + W
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PEV++ ++ K D+W+ G+
Sbjct: 175 PEVLMY---SKFSSKSDIWAFGV 194
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ +++ +C V + YL S +HRD+ A N L+ + G VK+
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 71/268 (26%)
Query: 151 IAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREI-VAIKKM-------------- 195
IAEL + P + R I GS+GAV + S I VAIK++
Sbjct: 14 IAELHAMQSPYTV---QRFISSGSYGAV--CAGVDSEGIPVAIKRVFNTVSDGRTVNILS 68
Query: 196 -SYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSAS 249
S+L K+ +L+EIR L HPN + R ++ H +LV E +
Sbjct: 69 DSFLCKR-------VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 250 DIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLN 309
+I H + + Q ++ F H +L GL+
Sbjct: 122 QVI---------HDQRIVISPQHIQYFMYH------------------------ILLGLH 148
Query: 310 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMAPEVILAM 366
LH G +HRD+ GNILL + + + DF A + +V ++ APE L M
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPE--LVM 206
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPY 394
+ VD+WS G E+ RK +
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL HPN + R ++ H +LV E + +I + + + I
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMA 118
+L GL+ LH G +HRD+ GNILL + + + DF A + +V ++ A
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKE 158
PE L M + VD+WS G +AE+F+++
Sbjct: 202 PE--LVMQFKGFTKLVDMWSAGCV--------MAEMFNRK 231
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E + +I + + + I +L GL+ LH G +HRD+ GNILL +
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
Query: 676 GTVKL 680
+ +
Sbjct: 171 NDITI 175
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 59/286 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G+FG V ++ VA+K ++ + + I +EI+ L+ +HP+ I+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
++VMEY G LF++
Sbjct: 79 VISTPTDFFMVMEYVSGGE---------------------------------LFDYICKH 105
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN 349
++E E + +L ++Y H +HRD+K N+LL K+ADFG +++
Sbjct: 106 GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 350 SF---VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMNAMSALYH 405
G+P + APEVI Y G +VD+WS G+ LY
Sbjct: 166 FLRDSCGSPNYAAPEVISGR---LYAGPEVDIWSCGVI-------------------LYA 203
Query: 406 IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ P ++ K I P Y N + + L H+ Q D
Sbjct: 204 LLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 249
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRG 66
L+ +HP+ I+ ++VMEY G D I H R ++E E + +L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVIL 123
++Y H +HRD+K N+LL K+ADFG +++ G+P + APEVI
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS 183
Query: 124 AMDEGQYDG-KVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYAR 182
Y G +VD+WS G+ +L + FD E +F+ +R G V+Y
Sbjct: 184 GR---LYAGPEVDIWSCGVILYALLCGTLP--FDDEHVPTLFKKIR-------GGVFYIP 231
Query: 183 CLVSREIVAI 192
++R + +
Sbjct: 232 EYLNRSVATL 241
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G D I H R ++E E + +L ++Y H +HRD+K N+LL
Sbjct: 88 MVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 121/321 (37%), Gaps = 75/321 (23%)
Query: 141 ITPGSLKDP-EIAELFDKE-DPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK-- 193
+ P + +DP + F KE D I D + +G G FG V R + +EI VAIK
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
K+ Y KQ D L E + Q HPN I G + +V E + D
Sbjct: 82 KVGYTEKQRR----DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD--- 134
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+H A F ++ + G+ G+ YL
Sbjct: 135 --------------------SFLRKHDAQFTVI---------QLVGMLRGIASGMKYLSD 165
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAM 366
+G +HRD+ A NIL+ K++DFG + + P ++ W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTIS 426
++ DVWS GI E+ ++ + P + S+ VIK +
Sbjct: 226 ---KFTSASDVWSYGIVLWEV------------------MSYGERPYWEMSNQDVIKAVD 264
Query: 427 STAERKPPYFNMNAMSALYHI 447
PP M+ +ALY +
Sbjct: 265 EGYRLPPP---MDCPAALYQL 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V E GS + H ++ + G+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 217 TSPEAIAYR---KFTSASDVWSYGI 238
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
GS + H ++ + G+ G+ YL +G +HRD+ A NIL+ K+
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 42/237 (17%)
Query: 168 REIGHGSFGAVYYARCL---------VSREIVAIKKMSYLGKQCAEK-WADILKEIRFLR 217
+ +G G+FG V A + V++ VA+K L EK +D++ E+ ++
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVK---MLKSDATEKDLSDLISEMEMMK 73
Query: 218 QL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ KH N I G +D ++++EY S ++ E R +E C+
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVEY--ASKGNLREYLQARRPPGLE---------YCY 122
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ L +++ + V RG+ YL S IHRD+ A N+L+TE +K+
Sbjct: 123 NPSHN------PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 176
Query: 337 ADFGSASIKCPANSFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
ADFG A + + T WMAPE A+ + Y + DVWS G+ E+
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---ALFDRIYTHQSDVWSFGVLLWEI 230
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP---------------LKEEE 55
KH N I G +D ++++EY G+ + ++ + P L ++
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 56 IAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP- 114
+ + V RG+ YL S IHRD+ A N+L+TE +K+ADFG A + + T
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 115 -----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE A+ + Y + DVWS G+
Sbjct: 197 GRLPVKWMAPE---ALFDRIYTHQSDVWSFGV 225
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 618 MEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
+EYC + + E L +++ + V RG+ YL S IHRD+ A N+L+TE
Sbjct: 118 LEYCYNPSHNPEE----QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 173
Query: 678 VKL 680
+K+
Sbjct: 174 MKI 176
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 59/286 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G+FG V ++ VA+K ++ + + I +EI+ L+ +HP+ I+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
++VMEY G LF++
Sbjct: 79 VISTPTDFFMVMEYVSGGE---------------------------------LFDYICKH 105
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN 349
++E E + +L ++Y H +HRD+K N+LL K+ADFG +++
Sbjct: 106 GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 350 SF---VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPYFNMNAMSALYH 405
G+P + APEVI Y G +VD+WS G+ LY
Sbjct: 166 FLRTSCGSPNYAAPEVISGR---LYAGPEVDIWSCGVI-------------------LYA 203
Query: 406 IAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQND 451
+ P ++ K I P Y N + + L H+ Q D
Sbjct: 204 LLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 249
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 8 LRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRG 66
L+ +HP+ I+ ++VMEY G D I H R ++E E + +L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSA 123
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVIL 123
++Y H +HRD+K N+LL K+ADFG +++ G+P + APEVI
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
Query: 124 AMDEGQYDG-KVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYAR 182
Y G +VD+WS G+ +L + FD E +F+ +R G V+Y
Sbjct: 184 GR---LYAGPEVDIWSCGVILYALLCGTLP--FDDEHVPTLFKKIR-------GGVFYIP 231
Query: 183 CLVSREIVAI 192
++R + +
Sbjct: 232 EYLNRSVATL 241
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 616 LVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
+VMEY G D I H R ++E E + +L ++Y H +HRD+K N+LL
Sbjct: 88 MVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 71/268 (26%)
Query: 151 IAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREI-VAIKKM-------------- 195
IAEL + P + R I GS+GAV + S I VAIK++
Sbjct: 14 IAELHAMQSPYTV---QRFISSGSYGAV--CAGVDSEGIPVAIKRVFNTVSDGRTVNILS 68
Query: 196 -SYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSAS 249
S+L K+ +L+EIR L HPN + R ++ H +LV E +
Sbjct: 69 DSFLCKR-------VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 250 DIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLN 309
+I H + + Q ++ F H +L GL+
Sbjct: 122 QVI---------HDQRIVISPQHIQYFMYH------------------------ILLGLH 148
Query: 310 YLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMAPEVILAM 366
LH G +HRD+ GNILL + + + DF A + +V ++ APE L M
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPE--LVM 206
Query: 367 DEGQYDGKVDVWSLGITCIELAERKPPY 394
+ VD+WS G E+ RK +
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRD-----HTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICS 61
LL HPN + R ++ H +LV E + +I + + + I
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPANSFVGTPYWMA 118
+L GL+ LH G +HRD+ GNILL + + + DF A + +V ++ A
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 119 PEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKE 158
PE L M + VD+WS G +AE+F+++
Sbjct: 202 PE--LVMQFKGFTKLVDMWSAGCV--------MAEMFNRK 231
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
LV E + +I + + + I +L GL+ LH G +HRD+ GNILL +
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
Query: 676 GTVKL 680
+ +
Sbjct: 171 NDITI 175
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 110
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 111 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 138
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 139 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 196
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 197 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 246
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 247 ELMTRGAPPYPDVNTFDITVYLLQ 270
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 159
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 160 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 220 K-------WMALE---SLQTQKFTTKSDVWSFGV 243
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 124 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 181
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 182 CMLDEKFTVKV 192
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA-I 59
+S+ LKHP+ +E Y D ++V E+ G A E+ KR + E +A+
Sbjct: 79 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG-ADLCFEIVKRADAGFVYSEAVASHY 137
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVG 112
+L L Y H IHRDVK +LL + VKL FG A A VG
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 197
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
TP++MAPEV+ Y VDVW G+
Sbjct: 198 TPHFMAPEVV---KREPYGKPVDVWGCGV 223
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 106/277 (38%), Gaps = 65/277 (23%)
Query: 138 SLGITP-GSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREI-----VA 191
S G+ P GS+ D ++ LF E ++E IG G F V RC ++RE V
Sbjct: 8 SSGLVPRGSMADDDV--LF-----EDVYELCEVIGKGPFSVV--RRC-INRETGQQFAVK 57
Query: 192 IKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDI 251
I ++ D+ +E LKHP+ +E Y D ++V E+ G
Sbjct: 58 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG----- 112
Query: 252 IEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRP----LKEEEIAA-ICSGVLR 306
A FE+ KR + E +A+ +L
Sbjct: 113 -----------------------------ADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 307 GLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVGTPYWMA 359
L Y H IHRDVK +LL + VKL FG A A VGTP++MA
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 360 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
PEV+ Y VDVW G+ L P++
Sbjct: 204 PEVV---KREPYGKPVDVWGCGVILFILLSGCLPFYG 237
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA-I 59
+S+ LKHP+ +E Y D ++V E+ G A E+ KR + E +A+
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG-ADLCFEIVKRADAGFVYSEAVASHY 135
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVG 112
+L L Y H IHRDVK +LL + VKL FG A A VG
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 195
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
TP++MAPEV+ Y VDVW G+
Sbjct: 196 TPHFMAPEVV---KREPYGKPVDVWGCGV 221
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 99/263 (37%), Gaps = 61/263 (23%)
Query: 155 FDKEDPEKIFEDLRE----IGHGSFGAVYYARCLVSREI-----VAIKKMSYLGKQCAEK 205
D D + +FED+ E IG G F V RC ++RE V I ++
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGPFSVV--RRC-INRETGQQFAVKIVDVAKFTSSPGLS 69
Query: 206 WADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG 265
D+ +E LKHP+ +E Y D ++V E+ G
Sbjct: 70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG------------------- 110
Query: 266 MGNRLQQLKCFTEHFALFNFEVHKRP----LKEEEIAA-ICSGVLRGLNYLHSLGRIHRD 320
A FE+ KR + E +A+ +L L Y H IHRD
Sbjct: 111 ---------------ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 321 VKAGNILLT---ETGTVKLADFGSA----SIKCPANSFVGTPYWMAPEVILAMDEGQYDG 373
VK +LL + VKL FG A A VGTP++MAPEV+ Y
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGK 212
Query: 374 KVDVWSLGITCIELAERKPPYFN 396
VDVW G+ L P++
Sbjct: 213 PVDVWGCGVILFILLSGCLPFYG 235
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 61
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ ++++E+ GN L L
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMT--------------------YGNLLDYL 101
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 102 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 150
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 151 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 208 TYGMSPYPGID-LSQVYELLEKD 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ ++++E+ G+ D + E +++ + + + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 181 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 238 CPEKVYELMR 247
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 91
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 92 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 119
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 120 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 178 LARDMYDKEXXSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 227
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 228 ELMTRGAPPYPDVNTFDITVYLLQ 251
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 140
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 201 K-------WMALE---SLQTQKFTTKSDVWSFGV 224
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 162
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 163 CMLDEKFTVKV 173
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 65
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ ++++E+ GN L L
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFM--------------------TYGNLLDYL 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 106 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 154
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 212 TYGMSPYPGID-LSQVYELLEKD 233
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ ++++E+ G+ D + E +++ + + + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 185 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 242 CPEKVYELMR 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 92
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 93 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 120
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 121 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 179 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 228
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLLQ 252
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 141
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 202 K-------WMALE---SLQTQKFTTKSDVWSFGV 225
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 163
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 164 CMLDEKFTVKV 174
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ ++++E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFM--------------------TYGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ ++++E+ G+ D + R +E++A+
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 176 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 233 RPEGCPEKVYELMR 246
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 111
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 112 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 139
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 140 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 197
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 198 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 247
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 248 ELMTRGAPPYPDVNTFDITVYLLQ 271
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 160
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 161 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 221 K-------WMALE---SLQTQKFTTKSDVWSFGV 244
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 125 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 182
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 183 CMLDEKFTVKV 193
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 124/335 (37%), Gaps = 95/335 (28%)
Query: 168 REIGHGSFGAVYYARCL---VSREIVA-IKKMSYLGKQCAEKWADILKEIRFLRQLKH-P 222
+E+G G F V +C+ +E A K G+ C A+IL EI L K P
Sbjct: 35 KELGRGKFAVV--RQCISKSTGQEYAAKFLKKRRRGQDCR---AEILHEIAVLELAKSCP 89
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
I Y L++EY G E F+L
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGG------------------------------EIFSL 119
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET---GTVKLADF 339
E+ + + E ++ + +L G+ YLH +H D+K NILL+ G +K+ DF
Sbjct: 120 CLPELAEM-VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYD---GKVDVWSLGITCIELAERKPP 393
G + C +GTP ++APE++ YD D+W++GI L P
Sbjct: 179 GMSRKIGHACELREIMGTPEYLAPEIL------NYDPITTATDMWNIGIIAYMLLTHTSP 232
Query: 394 YFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHIAQNDTP 453
+ + +I+Q + D+S +T SS ++
Sbjct: 233 FVGEDNQETYLNISQVNV------DYSE-ETFSSVSQLA--------------------- 264
Query: 454 CLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLLTH 488
F+ S L KNP RP++ L+H
Sbjct: 265 -----------TDFIQSLLVKNPEKRPTAEICLSH 288
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 14 PNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLH 71
P I Y L++EY G S + + E ++ + +L G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 72 SLGRIHRDVKAGNILLTET---GTVKLADFGSASI---KCPANSFVGTPYWMAPEVILAM 125
+H D+K NILL+ G +K+ DFG + C +GTP ++APE++
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--- 205
Query: 126 DEGQYD---GKVDVWSLGI 141
YD D+W++GI
Sbjct: 206 ---NYDPITTATDMWNIGI 221
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
L++EY G S + + E ++ + +L G+ YLH +H D+K NILL+
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ ++++E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMT--------------------YGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ ++++E+ G+ D + R +E++A+
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 176 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 233 RPEGCPEKVYELMR 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 65/258 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GS+G VY A + + VAIKK++ + + + IL+EI L +LK
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLID-CKRILREITILNRLK--------- 85
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ +++ + L D+++ + E +E + L++L K
Sbjct: 86 ------SDYIIRLHDLIIPEDLLK--FDELYIVLEIADSDLKKL--------------FK 123
Query: 290 RP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA----- 342
P L E+ + I +L G ++H G IHRD+K N LL + +VK+ DFG A
Sbjct: 124 TPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINS 183
Query: 343 ------------------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVW 378
++K S V T ++ APE+IL + Y +D+W
Sbjct: 184 DKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE--NYTNSIDIW 241
Query: 379 SLGITCIELAERKPPYFN 396
S G EL + N
Sbjct: 242 STGCIFAELLNMMKSHIN 259
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 36/142 (25%)
Query: 30 WLVMEYCLGSASDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL 87
++V+E + SD+ ++ K P L E+ + I +L G ++H G IHRD+K N LL
Sbjct: 108 YIVLEI---ADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL 164
Query: 88 TETGTVKLADFGSA-----------------------------SIKCPANSFVGTPYWMA 118
+ +VK+ DFG A ++K S V T ++ A
Sbjct: 165 NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRA 224
Query: 119 PEVILAMDEGQYDGKVDVWSLG 140
PE+IL + Y +D+WS G
Sbjct: 225 PELILLQE--NYTNSIDIWSTG 244
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 626 SDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
SD+ ++ K P L E+ + I +L G ++H G IHRD+K N LL + +VK+
Sbjct: 116 SDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKI 172
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 92
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 93 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 120
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 121 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 179 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 228
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLLQ 252
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 141
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 202 K-------WMALE---SLQTQKFTTKSDVWSFGV 225
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 163
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 164 CMLDEKFTVKV 174
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 91
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 92 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 119
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 120 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 178 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 227
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 228 ELMTRGAPPYPDVNTFDITVYLLQ 251
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 140
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 201 K-------WMALE---SLQTQKFTTKSDVWSFGV 224
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 162
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 163 CMLDEKFTVKV 173
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 65
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 106 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 154
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 155 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 212 TYGMSPYPGID-LSQVYELLEKD 233
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 185 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 242 CPEKVYELMR 251
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 90
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 91 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 118
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 119 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 177 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 226
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 227 ELMTRGAPPYPDVNTFDITVYLLQ 250
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 139
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 140 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 200 K-------WMALE---SLQTQKFTTKSDVWSFGV 223
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 161
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 162 CMLDEKFTVKV 172
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ ++++E+ G+ D + E +++ + + + +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 118 APEVILAMDEGQYDGKVDVWSLGI----------TPGSLKDP-EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ +P DP ++ EL +K+
Sbjct: 178 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 235 CPEKVYELMR 244
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G +G VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G R+ ++++E+ GN L L+ E +
Sbjct: 74 GVCTREPPFYIIIEFMT--------------------YGNLLDYLR-----------ECN 102
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-- 346
++ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 347 PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSA 402
+ G + W APE ++ ++ K DVW+ G+ E+A PY ++ S
Sbjct: 163 TXTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQ 218
Query: 403 LYHIAQND 410
+Y + + D
Sbjct: 219 VYELLEKD 226
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 89
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 90 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 117
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 118 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 175
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 176 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 225
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 226 ELMTRGAPPYPDVNTFDITVYLLQ 249
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 138
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 139 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 199 K-------WMALE---SLQTQKFTTKSDVWSFGV 222
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 103 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 160
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 161 CMLDEKFTVKV 171
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 45/248 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G FG VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G R+ +++ E+ GN L L+ E +
Sbjct: 74 GVCTREPPFYIITEFMT--------------------YGNLLDYLR-----------ECN 102
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-- 346
++ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 347 PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSA 402
+ G + W APE ++ ++ K DVW+ G+ E+A PY ++ S
Sbjct: 163 TXTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQ 218
Query: 403 LYHIAQND 410
+Y + + D
Sbjct: 219 VYELLEKD 226
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 113
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI----------TPGSLKDP-EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ +P DP ++ EL +K+
Sbjct: 174 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 231 RPEGCPEKVYELMR 244
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 84
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 85 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 112
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 113 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 170
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 171 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 220
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 221 ELMTRGAPPYPDVNTFDITVYLLQ 244
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 133
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 134 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 194 K-------WMALE---SLQTQKFTTKSDVWSFGV 217
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 98 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 155
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 156 CMLDEKFTVKV 166
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 87
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 88 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 115
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ YL S +HRD+ A N +L E TVK+ADFG
Sbjct: 116 NFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 173
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 174 LARDMYDKEYYSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 223
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 224 ELMTRGAPPYPDVNTFDITVYLLQ 247
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 136
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ YL S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 197 K-------WMALE---SLQTQKFTTKSDVWSFGV 220
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ YL S +HRD+ A N
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKKFVHRDLAARN 158
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 159 CMLDEKFTVKV 169
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 65
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 106 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 154
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 212 TYGMSPYPGID-LSQVYELLEKD 233
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 185 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 242 CPEKVYELMR 251
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 65
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 106 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 154
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 212 TYGMSPYPGID-LSQVYELLEKD 233
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 120
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 181 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 238 RPEGCPEKVYELMR 251
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 65
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 105
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 106 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 154
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 212 TYGMSPYPGID-LSQVYELLEKD 233
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 185 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 242 CPEKVYELMR 251
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 25/193 (12%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE-VHKRPLKEEEIAA-ICSGV 63
++L +++H N I+ + LVME GS D+ + + P +E +A+ I +
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN---SFVGTPYWMAPE 120
+ + YL IHRD+K NI++ E T+KL DFGSA+ +F GT + APE
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPE 199
Query: 121 VILAMDEGQYDG-KVDVWSLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVY 179
V++ Y G ++++WSLG+T + L +E+P F +L E + Y
Sbjct: 200 VLMG---NPYRGPELEMWSLGVT--------LYTLVFEENP---FCELEETVEAAIHPPY 245
Query: 180 YARCLVSREIVAI 192
LVS+E++++
Sbjct: 246 ----LVSKELMSL 254
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 164 FEDLREIGHGSFGAVYYA-RCLVSREIVA--IKKMSYLGKQCAE--KWADILKEIRFLRQ 218
+ + +G G+FG V+ A ++E+V IKK L E K + EI L +
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 219 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTE 278
++H N I+ + LVME GS D
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKH-GSGLD---------------------------- 116
Query: 279 HFALFNFEVHKRPLKEEEIAA-ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
LF F + + P +E +A+ I ++ + YL IHRD+K NI++ E T+KL
Sbjct: 117 ---LFAF-IDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI 172
Query: 338 DFGSASIKCPAN---SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPP 393
DFGSA+ +F GT + APEV++ Y G ++++WSLG+T L + P
Sbjct: 173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMG---NPYRGPELEMWSLGVTLYTLVFEENP 229
Query: 394 Y 394
+
Sbjct: 230 F 230
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 615 QLVMEYCLGSASDIIE-VHKRPLKEEEIAA-ICSGVLRGLNYLHSLGRIHRDVKAGNILL 672
QLVME GS D+ + + P +E +A+ I ++ + YL IHRD+K NI++
Sbjct: 105 QLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI 163
Query: 673 TETGTVKL 680
E T+KL
Sbjct: 164 AEDFTIKL 171
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 72/268 (26%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG GS+G V A + + +VAIKK+ + + + IL+EI L +L H
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID-CKRILREIAILNRLNH-------- 111
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA-LFNFEVH 288
DH ++ DI+ I ++ VE L+ F LF V+
Sbjct: 112 ----DHVVKVL---------DIV----IPKD--VEKFDELYVVLEIADSDFKKLFRTPVY 152
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCP 347
L E I + +L G+ Y+HS G +HRD+K N L+ + +VK+ DFG A ++ P
Sbjct: 153 ---LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
Query: 348 AN------------------------------SFVGTPYWMAPEVILAMDEGQYDGKVDV 377
N V T ++ APE+IL + Y +DV
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE--NYTEAIDV 267
Query: 378 WSLGITCIELAERKPPYFNMNAMSALYH 405
WS+G EL NM + YH
Sbjct: 268 WSIGCIFAEL-------LNMIKENVAYH 288
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 35/133 (26%)
Query: 41 SDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 98
SD ++ + P L E I + +L G+ Y+HS G +HRD+K N L+ + +VK+ DF
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDF 200
Query: 99 GSA-SIKCPAN------------------------------SFVGTPYWMAPEVILAMDE 127
G A ++ P N V T ++ APE+IL +
Sbjct: 201 GLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE- 259
Query: 128 GQYDGKVDVWSLG 140
Y +DVWS+G
Sbjct: 260 -NYTEAIDVWSIG 271
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 626 SDIIEVHKRP--LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
SD ++ + P L E I + +L G+ Y+HS G +HRD+K N L+ + +VK+
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV 197
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 64
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 104
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 105 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 153
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 154 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 210
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 211 TYGMSPYPGID-LSQVYELLEKD 232
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 123
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 124 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 184 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 241 CPEKVYELMR 250
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 62
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 103 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 151
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 209 TYGMSPYPGID-LSQVYELLEKD 230
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 182 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 239 CPEKVYELMR 248
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 127/357 (35%), Gaps = 96/357 (26%)
Query: 155 FDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADI 209
F KE + + IG G FG V R V REI VAIK K Y KQ D
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ----RRDF 62
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
L E + Q HPN I G + ++ EY + D
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF----------------- 105
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
L+ F + ++ + G+ G+ YL + +HRD+ A NIL+
Sbjct: 106 ---LRKNDGRFTVI------------QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN 150
Query: 330 ETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGI 382
K++DFG + + P ++ W APE I ++ DVWS GI
Sbjct: 151 SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGI 207
Query: 383 TCIE-LAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAM 441
E ++ + PY++M S+ VIK I PP M+
Sbjct: 208 VMWEVMSYGERPYWDM-------------------SNQDVIKAIEEGYRLPPP---MDCP 245
Query: 442 SALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRL--LTHDLVTRPRS 496
AL+ + + C K +DRP G++ + L+ P S
Sbjct: 246 IALHQLMLD--------------------CWQKERSDRPKFGQIVNMLDKLIRNPNS 282
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + ++ EY GS + + ++ + G+
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 125
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL + +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I ++ DVWS GI
Sbjct: 186 TAPEAIAYR---KFTSASDVWSYGIV 208
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 117 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 157
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 151
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 152 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 179
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 180 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 237
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 238 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 287
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 288 ELMTRGAPPYPDVNTFDITVYLLQ 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 200
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 261 K-------WMALE---SLQTQKFTTKSDVWSFGV 284
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 222
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 223 CMLDEKFTVKV 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 176 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 233 RPEGCPEKVYELMR 246
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 129/320 (40%), Gaps = 57/320 (17%)
Query: 148 DPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVS--REIVAIKKMSYLGKQCAEK 205
DP I + D D + F+D+ IG G+FG V AR R AIK+M + +
Sbjct: 15 DPTIYPVLDWNDIK--FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 70
Query: 206 WADILKEIRFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D E+ L +L HPN I G +L +EY G+ D +
Sbjct: 71 --DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----------- 117
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
R ++ FA+ N L +++ + V RG++YL IHRD+ A
Sbjct: 118 -----RKSRVLETDPAFAIANSTAS--TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 170
Query: 324 GNILLTETGTVKLADFG-SASIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSL 380
NIL+ E K+ADFG S + +G WMA E +++ Y DVWS
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE---SLNYSVYTTNSDVWSY 227
Query: 381 GI----------------TCIELAERKPPYFN----MNAMSALYHIAQN---DTPCLQSS 417
G+ TC EL E+ P + +N +Y + + + P + S
Sbjct: 228 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPS 287
Query: 418 DWSVIKTISSTAERKPPYFN 437
++ +++ E + Y N
Sbjct: 288 FAQILVSLNRMLEERKTYVN 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANS 109
L +++ + V RG++YL IHRD+ A NIL+ E K+ADFG S +
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 110 FVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+G WMA E +++ Y DVWS G+
Sbjct: 199 TMGRLPVRWMAIE---SLNYSVYTTNSDVWSYGV 229
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG++YL IHRD+ A NIL+ E K+
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 176 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 233 RPEGCPEKVYELMR 246
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 62
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 103 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 151
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 209 TYGMSPYPGID-LSQVYELLEKD 230
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 182 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 239 CPEKVYELMR 248
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 180 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 237 CPEKVYELMR 246
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 267
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 307
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHR++ A N L+ E
Sbjct: 308 R-----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL 356
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 357 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 413
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 414 TYGMSPYPGID-LSQVYELLEKD 435
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 322
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHR++ A N L+ E VK+ADFG + + + G +
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED--- 159
W APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 383 IKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 439
Query: 160 -----PEKIFEDLR 168
PEK++E +R
Sbjct: 440 RPEGCPEKVYELMR 453
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 55/292 (18%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
++++G G F V L A+K++ +Q E + +E R HPN +
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE---EAQREADMHRLFNHPNILR 90
Query: 227 YRGCYLRD----HTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
LR+ H AWL++ + F + N +++LK
Sbjct: 91 LVAYCLRERGAKHEAWLLLPF-----------------FKRGTLWNEIERLKDKG----- 128
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
NF L E++I + G+ RGL +H+ G HRD+K NILL + G L D GS
Sbjct: 129 -NF------LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181
Query: 343 SIKC----PANSFVGTPYWM---------APEVILAMDEGQYDGKVDVWSLGITCIELAE 389
+ C + + W APE+ D + DVWSLG +
Sbjct: 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241
Query: 390 RKPPY---FNMN---AMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPY 435
+ PY F A++ ++ +P S+ W ++ ++ + + P+
Sbjct: 242 GEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 21/153 (13%)
Query: 9 RQLKHPNTIEYRGCYLRD----HTAWLVMEYC-LGSASDIIEVHKRP---LKEEEIAAIC 60
R HPN + LR+ H AWL++ + G+ + IE K L E++I +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC----PANSFVGTPYW 116
G+ RGL +H+ G HRD+K NILL + G L D GS + C + + W
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 117 M---------APEVILAMDEGQYDGKVDVWSLG 140
APE+ D + DVWSLG
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLG 233
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 676
L E++I + G+ RGL +H+ G HRD+K NILL + G
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G +G VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G R+ +++ E+ GN L L+ E +
Sbjct: 89 GVCTREPPFYIITEFM--------------------TYGNLLDYLR-----------ECN 117
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-- 346
++ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 118 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177
Query: 347 PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSA 402
+ G + W APE ++ ++ K DVW+ G+ E+A PY ++ +S
Sbjct: 178 TYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ 233
Query: 403 LYHIAQND 410
+Y + + D
Sbjct: 234 VYELLEKD 241
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 133 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 193 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 250 CPEKVYELMR 259
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 60
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 100
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 101 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 207 TYGMSPYPGID-LSQVYELLEKD 228
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHRD+ A N L+ E VK+ADFG + + + G + W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 180 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 237 CPEKVYELMR 246
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 129/320 (40%), Gaps = 57/320 (17%)
Query: 148 DPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVS--REIVAIKKMSYLGKQCAEK 205
DP I + D D + F+D+ IG G+FG V AR R AIK+M + +
Sbjct: 5 DPTIYPVLDWNDIK--FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 60
Query: 206 WADILKEIRFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D E+ L +L HPN I G +L +EY G+ D +
Sbjct: 61 --DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----------- 107
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
R ++ FA+ N L +++ + V RG++YL IHRD+ A
Sbjct: 108 -----RKSRVLETDPAFAIANSTAST--LSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 160
Query: 324 GNILLTETGTVKLADFG-SASIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSL 380
NIL+ E K+ADFG S + +G WMA E +++ Y DVWS
Sbjct: 161 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE---SLNYSVYTTNSDVWSY 217
Query: 381 GI----------------TCIELAERKPPYFN----MNAMSALYHIAQN---DTPCLQSS 417
G+ TC EL E+ P + +N +Y + + + P + S
Sbjct: 218 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPS 277
Query: 418 DWSVIKTISSTAERKPPYFN 437
++ +++ E + Y N
Sbjct: 278 FAQILVSLNRMLEERKTYVN 297
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANS 109
L +++ + V RG++YL IHRD+ A NIL+ E K+ADFG S +
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 110 FVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+G WMA E +++ Y DVWS G+
Sbjct: 189 TMGRLPVRWMAIE---SLNYSVYTTNSDVWSYGV 219
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG++YL IHRD+ A NIL+ E K+
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 173
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 65/247 (26%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLV----SREIVAIKKMSYLGKQCAEKWADILKEIRFL 216
E+ + + ++G G+FG+V R + +VA+K++ + G ++ D +EI+ L
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQIL 62
Query: 217 RQLKHPNTIEYRGCYLRDHTA--WLVMEY----CLGSASDIIEVHWIEREFHVEGMGNRL 270
+ L ++YRG LVMEY CL R+F
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCL-------------RDF--------- 100
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 330
+ H+ L + S + +G+ YL S +HRD+ A NIL+
Sbjct: 101 --------------LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 146
Query: 331 TGTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 380
VK+ADFG A ++ P S + +W APE ++ + + + DVWS
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPE---SLSDNIFSRQSDVWSF 200
Query: 381 GITCIEL 387
G+ EL
Sbjct: 201 GVVLYEL 207
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 31 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 89
LVMEY G D ++ H+ L + S + +G+ YL S +HRD+ A NIL+
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 146
Query: 90 TGTVKLADFGSAS----------IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 139
VK+ADFG A ++ P S + +W APE ++ + + + DVWS
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPE---SLSDNIFSRQSDVWSF 200
Query: 140 GIT 142
G+
Sbjct: 201 GVV 203
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+LVMEY G D ++ H+ L + S + +G+ YL S +HRD+ A NIL+
Sbjct: 86 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 674 ETGTVKL 680
VK+
Sbjct: 146 SEAHVKI 152
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 47/249 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G +G VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G R+ +++ E+ GN L L+ E +
Sbjct: 77 GVCTREPPFYIITEFM--------------------TYGNLLDYLR-----------ECN 105
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI---- 344
++ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 345 --KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMS 401
PA + W APE ++ ++ K DVW+ G+ E+A PY ++ +S
Sbjct: 166 TYTAPAGAKFPIK-WTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LS 220
Query: 402 ALYHIAQND 410
+Y + + D
Sbjct: 221 QVYELLEKD 229
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 31/191 (16%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYW 116
+ + YL IHRD+ A N L+ E VK+ADFG + + PA + W
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-W 179
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------ 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 180 TAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 236
Query: 160 --PEKIFEDLR 168
PEK++E +R
Sbjct: 237 GCPEKVYELMR 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 93
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 94 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 121
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 122 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 180 LARDMLDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 229
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 230 ELMTRGAPPYPDVNTFDITVYLLQ 253
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 142
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 203 K-------WMALE---SLQTQKFTTKSDVWSFGV 226
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 164
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 165 CMLDEKFTVKV 175
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 48/264 (18%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 62
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM--------------------TYGNLLDYL 102
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHRD+ A N L+ E
Sbjct: 103 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 151
Query: 334 VKLADFGSASI------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
VK+ADFG + + PA + W APE ++ ++ K DVW+ G+ E+
Sbjct: 152 VKVADFGLSRLMTGDTYTAPAGAKFPIK-WTAPE---SLAYNKFSIKSDVWAFGVLLWEI 207
Query: 388 AER-KPPYFNMNAMSALYHIAQND 410
A PY ++ +S +Y + + D
Sbjct: 208 ATYGMSPYPGID-LSQVYELLEKD 230
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 31/191 (16%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPYW 116
+ + YL IHRD+ A N L+ E VK+ADFG + + PA + W
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-W 180
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------ 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 181 TAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 237
Query: 160 --PEKIFEDLR 168
PEK++E +R
Sbjct: 238 GCPEKVYELMR 248
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 42/240 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
L D E+ F+ IGHG FG VY L VA+K+ + Q E++ ++ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETL 89
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
F R HP+ + G +C I+ ++E GN + L
Sbjct: 90 SFCR---HPHLVSLIG-------------FCDERNEMILIYKYMEN-------GNLKRHL 126
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ ++ + E+ IC G RGL+YLH+ IHRDVK+ NILL E
Sbjct: 127 ---------YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV 177
Query: 334 VKLADFGSASIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K+ DFG + + GT ++ PE + +G+ K DV+S G+ E+
Sbjct: 178 PKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI---KGRLTEKSDVYSFGVVLFEV 234
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 54 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS---- 109
E+ IC G RGL+YLH+ IHRDVK+ NILL E K+ DFG + +
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 110 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
GT ++ PE + +G+ K DV+S G+
Sbjct: 199 XVVKGTLGYIDPEYFI---KGRLTEKSDVYSFGVV 230
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E+ IC G RGL+YLH+ IHRDVK+ NILL E K+
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKI 180
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 92
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 93 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 120
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 121 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 179 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 228
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLLQ 252
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 141
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 202 K-------WMALE---SLQTQKFTTKSDVWSFGV 225
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 163
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 164 CMLDEKFTVKV 174
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 127/357 (35%), Gaps = 96/357 (26%)
Query: 155 FDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADI 209
F KE + + IG G FG V R V REI VAIK K Y KQ D
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ----RRDF 56
Query: 210 LKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNR 269
L E + Q HPN I G + ++ EY + D
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF----------------- 99
Query: 270 LQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 329
L+ F + ++ + G+ G+ YL + +HRD+ A NIL+
Sbjct: 100 ---LRKNDGRFTVI------------QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN 144
Query: 330 ETGTVKLADFGSASI--KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGI 382
K++DFG + + P ++ W APE I ++ DVWS GI
Sbjct: 145 SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGI 201
Query: 383 TCIE-LAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAM 441
E ++ + PY++M S+ VIK I PP M+
Sbjct: 202 VMWEVMSYGERPYWDM-------------------SNQDVIKAIEEGYRLPPP---MDCP 239
Query: 442 SALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRL--LTHDLVTRPRS 496
AL+ + + C K +DRP G++ + L+ P S
Sbjct: 240 IALHQLMLD--------------------CWQKERSDRPKFGQIVNMLDKLIRNPNS 276
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + ++ EY GS + + ++ + G+
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 119
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL + +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I ++ DVWS GI
Sbjct: 180 TAPEAIAYR---KFTSASDVWSYGIV 202
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 111 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 151
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 92
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 93 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 120
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 121 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 179 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 228
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLLQ 252
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 141
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 202 K-------WMALE---SLQTQKFTTKSDVWSFGV 225
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 163
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 164 CMLDEKFTVKV 174
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 93
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 94 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 121
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 122 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 180 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 229
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 230 ELMTRGAPPYPDVNTFDITVYLLQ 253
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 142
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 203 K-------WMALE---SLQTQKFTTKSDVWSFGV 226
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 164
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 165 CMLDEKFTVKV 175
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 97
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 98 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 125
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 126 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 183
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 184 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 233
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 234 ELMTRGAPPYPDVNTFDITVYLLQ 257
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 146
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 147 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 207 K-------WMALE---SLQTQKFTTKSDVWSFGV 230
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 111 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 168
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 169 CMLDEKFTVKV 179
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
+L +L HPN I+ + + LV+E G V K E + A +L
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA 160
Query: 67 LNYLHSLGRIHRDVKAGNILLTE---TGTVKLADFGSASI---KCPANSFVGTPYWMAPE 120
+ YLH G +HRD+K N+L +K+ADFG + I + + GTP + APE
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE 220
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
++ Y +VD+WS+GI
Sbjct: 221 ILRGC---AYGPEVDMWSVGI 238
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 48/239 (20%)
Query: 163 IFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
FE E+G G+ VY + +++ A+K + K+ +K + EI L +L HP
Sbjct: 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVL----KKTVDK-KIVRTEIGVLLRLSHP 108
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N I+ + + LV+E G L
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGE---------------------------------L 135
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE---TGTVKLADF 339
F+ V K E + A +L + YLH G +HRD+K N+L +K+ADF
Sbjct: 136 FDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADF 195
Query: 340 GSASI---KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPY 394
G + I + + GTP + APE++ Y +VD+WS+G IT I L +P Y
Sbjct: 196 GLSKIVEHQVLMKTVCGTPGYCAPEILRGC---AYGPEVDMWSVGIITYILLCGFEPFY 251
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
LV+E G V K E + A +L + YLH G +HRD+K N+L
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 125/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 82
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + +L H N + G L+ ++++E G
Sbjct: 83 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 119
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 120 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 171
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 172 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 228
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 229 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 268
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 269 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ +L H N + G L+ ++++E G S + E RP + +A +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 207 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 264
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 304
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHR++ A N L+ E
Sbjct: 305 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL 353
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 354 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 410
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 411 TYGMSPYPGID-LSQVYELLEKD 432
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 323
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHR++ A N L+ E VK+ADFG + + + G + W
Sbjct: 324 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 384 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 441 CPEKVYELMR 450
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 39/195 (20%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G R+ +++ E+ G+ D + R +E++A+
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 113
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV---GTPY 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + ++F G +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKF 172
Query: 116 ---WMAPEVILAMDEGQYDGKVDVWSLGI----------TPGSLKDP-EIAELFDKED-- 159
W APE ++ ++ K DVW+ G+ +P DP ++ EL +K+
Sbjct: 173 PIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 160 ------PEKIFEDLR 168
PEK++E +R
Sbjct: 230 ERPEGCPEKVYELMR 244
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G +G VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G R+ +++ E+ GN L L+ E +
Sbjct: 74 GVCTREPPFYIITEFMT--------------------YGNLLDYLR-----------ECN 102
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA 348
++ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTG 161
Query: 349 NSFV---GTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMS 401
++F G + W APE ++ ++ K DVW+ G+ E+A PY ++ S
Sbjct: 162 DTFTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-S 217
Query: 402 ALYHIAQND 410
+Y + + D
Sbjct: 218 QVYELLEKD 226
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 155 FDKEDPEKIFEDLR-EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
+DK + E+ ++ ++G G +G VY VA+K + K+ + + LKE
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEA 306
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
++++KHPN ++ G R+ +++ E+ GN L L
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--------------------YGNLLDYL 346
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ E +++ + + + + + + YL IHR++ A N L+ E
Sbjct: 347 R-----------ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL 395
Query: 334 VKLADFGSASIKC--PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
VK+ADFG + + + G + W APE ++ ++ K DVW+ G+ E+A
Sbjct: 396 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE---SLAYNKFSIKSDVWAFGVLLWEIA 452
Query: 389 ER-KPPYFNMNAMSALYHIAQND 410
PY ++ +S +Y + + D
Sbjct: 453 TYGMSPYPGID-LSQVYELLEKD 474
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDII-EVHKRPLKEEEIAAICSG 62
+++++++KHPN ++ G R+ +++ E+ G+ D + E +++ + + + +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 365
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY---WM 117
+ + YL IHR++ A N L+ E VK+ADFG + + + G + W
Sbjct: 366 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 118 APEVILAMDEGQYDGKVDVWSLGI------TPGSLKDP-----EIAELFDKED------- 159
APE ++ ++ K DVW+ G+ T G P ++ EL +K+
Sbjct: 426 APE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
Query: 160 -PEKIFEDLR 168
PEK++E +R
Sbjct: 483 CPEKVYELMR 492
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 74/264 (28%)
Query: 170 IGHGSFGAVYYARCL------VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY+ L + + ++ +++ +G+ + L E ++ HPN
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPN 90
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+ G LR + LV + + +H L
Sbjct: 91 VLSLLGICLRSEGSPLV--------------------------------VLPYMKHGDLR 118
Query: 284 NF---EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
NF E H +K+ + V +G+ +L S +HRD+ A N +L E TVK+ADFG
Sbjct: 119 NFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 341 SA---------------SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
A K P WMA E ++ ++ K DVWS G+
Sbjct: 177 LARDMYDKEFDSVHNKTGAKLPVK-------WMALE---SLQTQKFTTKSDVWSFGVLLW 226
Query: 386 ELAER-KPPYFNMNAMSALYHIAQ 408
EL R PPY ++N ++ Q
Sbjct: 227 ELMTRGAPPYPDVNTFDITVYLLQ 250
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL--GSASDII--EVHKRPLKEEEIAAICSG 62
+++ HPN + G LR + LV+ + G + I E H +K+ +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQ 139
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---------------SIKCPA 107
V +G+ +L S +HRD+ A N +L E TVK+ADFG A K P
Sbjct: 140 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMA E ++ ++ K DVWS G+
Sbjct: 200 K-------WMALE---SLQTQKFTTKSDVWSFGV 223
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 613 SPQLVMEYCL-GSASDII--EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
SP +V+ Y G + I E H +K+ + V +G+ +L S +HRD+ A N
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKKFVHRDLAARN 161
Query: 670 ILLTETGTVKL 680
+L E TVK+
Sbjct: 162 CMLDEKFTVKV 172
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 96
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ +++ME G
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG----------------------- 133
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 134 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 185
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 186 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 242
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 243 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 282
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 283 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ +++ME G S + E RP + +A +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 221 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 248
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 125/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 96
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + +L H N + G L+ ++++E G
Sbjct: 97 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 133
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 134 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 185
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 186 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 242
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 243 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 282
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 283 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ +L H N + G L+ ++++E G S + E RP + +A +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 221 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 248
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 108/285 (37%), Gaps = 55/285 (19%)
Query: 141 ITPGSLKDP-EIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLV--SREI-VAIK--K 194
I P + +DP E F KE + + IG G FG V + REI VAIK K
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 195 MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEV 254
Y KQ D L E + Q HPN I G + ++ E+ + D
Sbjct: 71 SGYTEKQRR----DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF-- 124
Query: 255 HWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL 314
L+ F + ++ + G+ G+ YL +
Sbjct: 125 ------------------LRQNDGQFTVI------------QLVGMLRGIAAGMKYLADM 154
Query: 315 GRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPY---WMAPEVILA 365
+HRD+ A NIL+ K++DFG + S +G W APE A
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE---A 211
Query: 366 MDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNAMSALYHIAQN 409
+ ++ DVWS GI E ++ + PY++M + I Q+
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD 256
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + ++ E+ GS + + ++ + G+
Sbjct: 85 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 144
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPY-- 115
G+ YL + +HRD+ A NIL+ K++DFG + S +G
Sbjct: 145 AAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 116 -WMAPEVILAMDEGQYDGKVDVWSLGIT 142
W APE A+ ++ DVWS GI
Sbjct: 205 RWTAPE---AIQYRKFTSASDVWSYGIV 229
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 136 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKV 176
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 107/290 (36%), Gaps = 72/290 (24%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
+G G FG V R + +EI VAIK K+ Y KQ D L E + Q HPN
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR----DFLGEASIMGQFDHPNI 79
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G + +V E + D +H A F
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLD-----------------------SFLRKHDAQFT 116
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + G+ G+ YL +G +HRD+ A NIL+ K++DFG + +
Sbjct: 117 VI---------QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 345 --KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNM 397
P ++ W +PE I ++ DVWS GI E+
Sbjct: 168 LEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVLWEV---------- 214
Query: 398 NAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFNMNAMSALYHI 447
++ + P + S+ VIK + PP M+ +ALY +
Sbjct: 215 --------MSYGERPYWEMSNQDVIKAVDEGYRLPPP---MDCPAALYQL 253
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + +V E GS + H ++ + G+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL +G +HRD+ A NIL+ K++DFG + + P ++ W
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
+PE I ++ DVWS GI
Sbjct: 188 TSPEAIAYR---KFTSASDVWSYGI 209
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 623 GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
GS + H ++ + G+ G+ YL +G +HRD+ A NIL+ K+
Sbjct: 102 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 159
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 81
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ +++ME G
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG----------------------- 118
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 119 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 170
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 171 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 227
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 228 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 267
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 268 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 296
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ +++ME G S + E RP + +A +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 206 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 233
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 154 LFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEI 213
L D E+ F+ IGHG FG VY L VA+K+ + Q E++ ++ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETL 89
Query: 214 RFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQL 273
F R HP+ + G +C I+ ++E GN + L
Sbjct: 90 SFCR---HPHLVSLIG-------------FCDERNEMILIYKYMEN-------GNLKRHL 126
Query: 274 KCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGT 333
+ ++ + E+ IC G RGL+YLH+ IHRDVK+ NILL E
Sbjct: 127 ---------YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV 177
Query: 334 VKLADFGSASIKCPANS------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K+ DFG + GT ++ PE + +G+ K DV+S G+ E+
Sbjct: 178 PKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI---KGRLTEKSDVYSFGVVLFEV 234
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 54 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS---- 109
E+ IC G RGL+YLH+ IHRDVK+ NILL E K+ DFG +
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 110 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
GT ++ PE + +G+ K DV+S G+
Sbjct: 199 XVVKGTLGYIDPEYFI---KGRLTEKSDVYSFGVV 230
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 639 EEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E+ IC G RGL+YLH+ IHRDVK+ NILL E K+
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKI 180
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 27/243 (11%)
Query: 158 EDPEKIFEDLREIGHGSFGAV-----YYARCLVSREIVAIKKMSYLGKQCAEKWADILKE 212
E P K + +G G FG V ++ + VA+K + + D+L E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSE 76
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQ 271
L+Q+ HP+ I+ G +D L++EY GS + RE G G
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL------RESRKVGPGYLGS 130
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
+ +R L ++ + + +G+ YL + +HRD+ A NIL+ E
Sbjct: 131 GGSRNSSSLD----HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
Query: 332 GTVKLADFGSASIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+K++DFG + +S+V WMA E + + Y + DVWS G+
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLW 243
Query: 386 ELA 388
E+
Sbjct: 244 EIV 246
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 47/203 (23%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHK---------------- 48
++L+Q+ HP+ I+ G +D L++EY GS + +
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 49 -------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 101
R L ++ + + +G+ YL + +HRD+ A NIL+ E +K++DFG +
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 102 SIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLG------ITPGSLKDP 149
+S+V WMA E + + Y + DVWS G +T G P
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 150 EIAELFDKEDPEKIFEDLREIGH 172
I PE++F +L + GH
Sbjct: 255 GIP-------PERLF-NLLKTGH 269
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+R L ++ + + +G+ YL + +HRD+ A NIL+ E +K+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 52/257 (20%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P + + ++ +G G FG V+ S + VA+K + K L+E ++
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTL----KPGTMSVQAFLEEANLMK 63
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
L+H + R+ +++ EY GS D ++ EG L +L F
Sbjct: 64 TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSD--------EGGKVLLPKLIDF 115
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ A G+ Y+ IHRD++A N+L++E+ K+
Sbjct: 116 SAQIA------------------------EGMAYIERKNYIHRDLRAANVLVSESLMCKI 151
Query: 337 ADFGSASIKCPANSFV---GTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
ADFG A + N + G + W APE A++ G + K DVWS GI E+
Sbjct: 152 ADFGLARV-IEDNEYTAREGAKFPIKWTAPE---AINFGCFTIKSDVWSFGILLYEIVTY 207
Query: 391 -KPPY---FNMNAMSAL 403
K PY N + M+AL
Sbjct: 208 GKIPYPGRTNADVMTAL 224
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKR-PLKEEEIAAICSG 62
++L++ L+H + R+ +++ EY GS D ++ + + ++ +
Sbjct: 59 ANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 118
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV---GTPY---W 116
+ G+ Y+ IHRD++A N+L++E+ K+ADFG A + N + G + W
Sbjct: 119 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKW 177
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
APE A++ G + K DVWS GI
Sbjct: 178 TAPE---AINFGCFTIKSDVWSFGI 199
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ G+ Y+ IHRD++A N+L++E+ K+
Sbjct: 119 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 151
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 67/293 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KHPNTIEYR 228
IG GSFG V A V +E VAIK + K+ A I E+R L + KH ++Y
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQI--EVRLLELMNKHDTEMKYY 117
Query: 229 GCYLRDHTAW-----LVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+L+ H + LV E + D++ R + G+ L T FA
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLL------RNTNFRGVSLNL------TRKFA-- 163
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHS--LGRIHRDVKAGNILLT--ETGTVKLADF 339
+C+ +L +L + L IH D+K NILL + +K+ DF
Sbjct: 164 --------------QQMCTALL----FLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205
Query: 340 GSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
GS+ + + + ++ +PEV+L M YD +D+WSLG +E+ +P + N
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMP---YDLAIDMWSLGCILVEMHTGEPLFSGAN 262
Query: 399 AMSALYHI-----------------AQNDTPCLQSSDWSVIKTISSTAERKPP 434
+ + I A+ L W++ KT E KPP
Sbjct: 263 EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 73 LGRIHRDVKAGNILLT--ETGTVKLADFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQ 129
L IH D+K NILL + +K+ DFGS+ + + + ++ +PEV+L M
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMP--- 234
Query: 130 YDGKVDVWSLG 140
YD +D+WSLG
Sbjct: 235 YDLAIDMWSLG 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 82
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 119
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 120 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 171
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 172 CLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 228
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 229 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 268
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 269 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 297
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 207 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 129/320 (40%), Gaps = 57/320 (17%)
Query: 148 DPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVS--REIVAIKKMSYLGKQCAEK 205
DP I + D D + F+D+ IG G+FG V AR R AIK+M + +
Sbjct: 12 DPTIYPVLDWNDIK--FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 67
Query: 206 WADILKEIRFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHV 263
D E+ L +L HPN I G +L +EY G+ D +
Sbjct: 68 --DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----------- 114
Query: 264 EGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKA 323
R ++ FA+ N L +++ + V RG++YL IHR++ A
Sbjct: 115 -----RKSRVLETDPAFAIANSTAS--TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAA 167
Query: 324 GNILLTETGTVKLADFG-SASIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSL 380
NIL+ E K+ADFG S + +G WMA E +++ Y DVWS
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE---SLNYSVYTTNSDVWSY 224
Query: 381 GI----------------TCIELAERKPPYFN----MNAMSALYHIAQN---DTPCLQSS 417
G+ TC EL E+ P + +N +Y + + + P + S
Sbjct: 225 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPS 284
Query: 418 DWSVIKTISSTAERKPPYFN 437
++ +++ E + Y N
Sbjct: 285 FAQILVSLNRMLEERKTYVN 304
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANS 109
L +++ + V RG++YL IHR++ A NIL+ E K+ADFG S +
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 110 FVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+G WMA E +++ Y DVWS G+
Sbjct: 196 TMGRLPVRWMAIE---SLNYSVYTTNSDVWSYGV 226
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L +++ + V RG++YL IHR++ A NIL+ E K+
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKI 180
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 67/293 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KHPNTIEYR 228
IG GSFG V A V +E VAIK + K+ A I E+R L + KH ++Y
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQI--EVRLLELMNKHDTEMKYY 98
Query: 229 GCYLRDHTAW-----LVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+L+ H + LV E + D++ R + G+ L T FA
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLL------RNTNFRGVSLNL------TRKFA-- 144
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHS--LGRIHRDVKAGNILLT--ETGTVKLADF 339
+C+ +L +L + L IH D+K NILL + +K+ DF
Sbjct: 145 --------------QQMCTALL----FLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 186
Query: 340 GSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
GS+ + + + ++ +PEV+L M YD +D+WSLG +E+ +P + N
Sbjct: 187 GSSCQLGQRIYQXIQSRFYRSPEVLLGMP---YDLAIDMWSLGCILVEMHTGEPLFSGAN 243
Query: 399 AMSALYHI-----------------AQNDTPCLQSSDWSVIKTISSTAERKPP 434
+ + I A+ L W++ KT E KPP
Sbjct: 244 EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 296
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 73 LGRIHRDVKAGNILLT--ETGTVKLADFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQ 129
L IH D+K NILL + +K+ DFGS+ + + + ++ +PEV+L M
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMP--- 215
Query: 130 YDGKVDVWSLG 140
YD +D+WSLG
Sbjct: 216 YDLAIDMWSLG 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA--SIKC 346
E E A I + + +LHS HRDVK N+L T + +KL DFG A + +
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 165
Query: 347 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ TPY++APEV + +YD D+WSLG+ L PP+++
Sbjct: 166 ALQTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 212
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 31 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++ME G S I E + E E A I + + +LHS HRDVK N+L T
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 89 ---ETGTVKLADFGSA--SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ +KL DFG A + + + TPY++APEV + +YD D+WSLG+
Sbjct: 144 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGV 198
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
++ME G S I E + E E A I + + +LHS HRDVK N+L T
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 287 VHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA 342
+HKR E E + + V L++LH+ G HRD+K NIL + VK+ DFG
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
Query: 343 S-IKCPAN----------SFVGTPYWMAPEVILAMDEGQ--YDGKVDVWSLGITCIELAE 389
S IK + + G+ +MAPEV+ A E YD + D+WSLG+ L
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 390 RKPPY 394
PP+
Sbjct: 222 GYPPF 226
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 30 WLVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL- 87
+LV E G S + +HKR E E + + V L++LH+ G HRD+K NIL
Sbjct: 87 YLVFEKMRG-GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 88 --TETGTVKLADFGSAS-IKCPAN----------SFVGTPYWMAPEVILAMDEGQ--YDG 132
+ VK+ DFG S IK + + G+ +MAPEV+ A E YD
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 133 KVDVWSLGI 141
+ D+WSLG+
Sbjct: 206 RCDLWSLGV 214
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E G S + +HKR E E + + V L++LH+ G HRD+K NIL
Sbjct: 88 LVFEKMRG-GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 675 TGTV 678
V
Sbjct: 147 PNQV 150
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSA--SIKC 346
E E A I + + +LHS HRDVK N+L T + +KL DFG A + +
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 347 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFN 396
+ TPY++APEV + +YD D+WSLG+ L PP+++
Sbjct: 185 ALQTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 31 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 88
++ME G S I E + E E A I + + +LHS HRDVK N+L T
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 89 ---ETGTVKLADFGSA--SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ +KL DFG A + + + TPY++APEV + +YD D+WSLG+
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV---LGPEKYDKSCDMWSLGV 217
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 616 LVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
++ME G S I E + E E A I + + +LHS HRDVK N+L T
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT--AWLVMEYC-LGSASDIIE--VHKRPLKEEEIAAICS 61
+L++L H N ++ T L+ME+C GS ++E + L E E +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNIL--LTETG--TVKLADFGSASIKCPANSFV---GTP 114
V+ G+N+L G +HR++K GNI+ + E G KL DFG+A FV GT
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179
Query: 115 YWMAPEV----ILAMD-EGQYDGKVDVWSLGIT 142
++ P++ +L D + +Y VD+WS+G+T
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 56/244 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIK---KMSYLGKQCAEKWADI-LKEIRFLRQLKHPNTI 225
+G G+ V+ R + ++ AIK +S+L + D+ ++E L++L H N +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFL------RPVDVQMREFEVLKKLNHKNIV 70
Query: 226 EYRGCYLRDHT--AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ T L+ME+C GS ++E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE---------------------------- 102
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL--LTETG--TVKLAD 338
+ L E E + V+ G+N+L G +HR++K GNI+ + E G KL D
Sbjct: 103 ---PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159
Query: 339 FGSASIKCPANSFV---GTPYWMAPEV----ILAMD-EGQYDGKVDVWSLGITCIELAER 390
FG+A FV GT ++ P++ +L D + +Y VD+WS+G+T A
Sbjct: 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Query: 391 KPPY 394
P+
Sbjct: 220 SLPF 223
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 616 LVMEYC-LGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL- 671
L+ME+C GS ++E + L E E + V+ G+N+L G +HR++K GNI+
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145
Query: 672 -----------LTETGTVKLDTPDEQ 686
LT+ G + DEQ
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQ 171
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 82
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 119
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 120 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 171
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 172 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 228
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 229 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 268
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 269 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 297
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 207 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 234
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 67/293 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KHPNTIEYR 228
IG GSFG V A V +E VAIK + K+ A I E+R L + KH ++Y
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQI--EVRLLELMNKHDTEMKYY 117
Query: 229 GCYLRDHTAW-----LVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
+L+ H + LV E + D++ R + G+ L T FA
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLL------RNTNFRGVSLNL------TRKFA-- 163
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHS--LGRIHRDVKAGNILLT--ETGTVKLADF 339
+C+ +L +L + L IH D+K NILL + +K+ DF
Sbjct: 164 --------------QQMCTALL----FLATPELSIIHCDLKPENILLCNPKRXAIKIVDF 205
Query: 340 GSA-SIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMN 398
GS+ + + + ++ +PEV+L M YD +D+WSLG +E+ +P + N
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMP---YDLAIDMWSLGCILVEMHTGEPLFSGAN 262
Query: 399 AMSALYHI-----------------AQNDTPCLQSSDWSVIKTISSTAERKPP 434
+ + I A+ L W++ KT E KPP
Sbjct: 263 EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 73 LGRIHRDVKAGNILLT--ETGTVKLADFGSA-SIKCPANSFVGTPYWMAPEVILAMDEGQ 129
L IH D+K NILL + +K+ DFGS+ + + + ++ +PEV+L M
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMP--- 234
Query: 130 YDGKVDVWSLG 140
YD +D+WSLG
Sbjct: 235 YDLAIDMWSLG 245
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 52 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 108
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 109 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 145
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 146 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 197
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 198 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 254
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 255 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 294
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 295 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 323
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 173 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 233 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 260
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 32 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 88
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 89 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 125
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 126 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 177
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 178 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 234
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 235 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 274
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 275 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 303
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 153 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 213 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 240
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 48/266 (18%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLK-HPNTIE 226
R + G F VY A+ + S A+K++ L + EK I++E+ F+++L HPN
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRL--LSNE-EEKNRAIIQEVCFMKKLSGHPN--- 87
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
++++C ++ E + EF + L +L C +
Sbjct: 88 -------------IVQFCSAASIGKEESDTGQAEFLL------LTEL-CKGQLVEFLKKM 127
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLTETGTVKLADFGSASI 344
+ PL + + I R + ++H IHRD+K N+LL+ GT+KL DFGSA+
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
Query: 345 --KCPANSFVG--------------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
P S+ TP + PE+I K D+W+LG L
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
Query: 389 ERKPPY---FNMNAMSALYHIAQNDT 411
R+ P+ + ++ Y I +DT
Sbjct: 248 FRQHPFEDGAKLRIVNGKYSIPPHDT 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 31 LVMEYCLGSASDIIEV--HKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNIL 86
L+ E C G + ++ + PL + + I R + ++H IHRD+K N+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 87 LTETGTVKLADFGSASI--KCPANSFVG--------------TPYWMAPEVILAMDEGQY 130
L+ GT+KL DFGSA+ P S+ TP + PE+I
Sbjct: 171 LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230
Query: 131 DGKVDVWSLG 140
K D+W+LG
Sbjct: 231 GEKQDIWALG 240
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 616 LVMEYCLGSASDIIEV--HKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNIL 671
L+ E C G + ++ + PL + + I R + ++H IHRD+K N+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 672 LTETGTVKL 680
L+ GT+KL
Sbjct: 171 LSNQGTIKL 179
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 123/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 122
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 123 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 159
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 160 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 211
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A + + WM PE + EG + K D
Sbjct: 212 CLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 268
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 269 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 308
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 309 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 337
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 247 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 274
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 42 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 98
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 99 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 135
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 136 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 187
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 188 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 244
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 245 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 284
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 285 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 163 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 223 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 250
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTA-WLVMEYCL-GSASDIIEVHKRP-LKEEEIAAI 59
A +S++ QL+H N ++ G + + ++V EY GS D + R L + +
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 107
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-WMA 118
V + YL +HRD+ A N+L++E K++DFG P W A
Sbjct: 108 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 167
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE A+ E ++ K DVWS GI
Sbjct: 168 PE---ALREKKFSTKSDVWSFGI 187
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+ IG G FG V ++ VA+K + K A A L E + QL+H N ++
Sbjct: 11 LQTIGKGEFGDVMLGDYRGNK--VAVKCI----KNDATAQA-FLAEASVMTQLRHSNLVQ 63
Query: 227 YRGCYLRDHTA-WLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
G + + ++V EY GS D ++ G + C L
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVD-----------YLRSRGRSVLGGDC------LLK 106
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
F + V + YL +HRD+ A N+L++E K++DFG
Sbjct: 107 FSLD---------------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151
Query: 345 KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
P W APE A+ E ++ K DVWS GI E+
Sbjct: 152 ASSTQDTGKLPVKWTAPE---ALREKKFSTKSDVWSFGILLWEI 192
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHT--AWLVMEYC-LGSASDIIE--VHKRPLKEEEIAAICS 61
+L++L H N ++ T L+ME+C GS ++E + L E E +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNIL--LTETG--TVKLADFGSASIKCPANSFV---GTP 114
V+ G+N+L G +HR++K GNI+ + E G KL DFG+A FV GT
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTE 179
Query: 115 YWMAPEV----ILAMD-EGQYDGKVDVWSLGIT 142
++ P++ +L D + +Y VD+WS+G+T
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 56/244 (22%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIK---KMSYLGKQCAEKWADI-LKEIRFLRQLKHPNTI 225
+G G+ V+ R + ++ AIK +S+L + D+ ++E L++L H N +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFL------RPVDVQMREFEVLKKLNHKNIV 70
Query: 226 EYRGCYLRDHT--AWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ T L+ME+C GS ++E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE---------------------------- 102
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL--LTETG--TVKLAD 338
+ L E E + V+ G+N+L G +HR++K GNI+ + E G KL D
Sbjct: 103 ---PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159
Query: 339 FGSASIKCPANSFV---GTPYWMAPEV----ILAMD-EGQYDGKVDVWSLGITCIELAER 390
FG+A FV GT ++ P++ +L D + +Y VD+WS+G+T A
Sbjct: 160 FGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Query: 391 KPPY 394
P+
Sbjct: 220 SLPF 223
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 616 LVMEYC-LGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL- 671
L+ME+C GS ++E + L E E + V+ G+N+L G +HR++K GNI+
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145
Query: 672 -----------LTETGTVKLDTPDEQ 686
LT+ G + DEQ
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQ 171
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTA-WLVMEYCL-GSASDIIEVHKRP-LKEEEIAAI 59
A +S++ QL+H N ++ G + + ++V EY GS D + R L + +
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-WMA 118
V + YL +HRD+ A N+L++E K++DFG P W A
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 182
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE A+ E ++ K DVWS GI
Sbjct: 183 PE---ALREKKFSTKSDVWSFGI 202
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+ IG G FG V ++ VA+K + K A A L E + QL+H N ++
Sbjct: 26 LQTIGKGEFGDVMLGDYRGNK--VAVKCI----KNDATAQA-FLAEASVMTQLRHSNLVQ 78
Query: 227 YRGCYLRDHTA-WLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
G + + ++V EY GS D ++ G + C L
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVD-----------YLRSRGRSVLGGDC------LLK 121
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
F + V + YL +HRD+ A N+L++E K++DFG
Sbjct: 122 FSLD---------------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166
Query: 345 KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
P W APE A+ E ++ K DVWS GI E+
Sbjct: 167 ASSTQDTGKLPVKWTAPE---ALREKKFSTKSDVWSFGILLWEI 207
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
RE+G G+FG V+ A C + +VA+K + + D +E L L+H
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK---DFHREAELLTNLQHE 75
Query: 223 NTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ +++ G + +V EY G + + H + EG TE
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP--------TE--- 124
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
L + ++ I + G+ YL S +HRD+ N L+ E VK+ DFG
Sbjct: 125 ----------LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGM 174
Query: 342 ASIKCPANSF-VGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPY 394
+ + + VG WM PE I+ ++ + DVWSLG+ E+ K P+
Sbjct: 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPW 231
Query: 395 FNMNAMSALYHIAQ 408
+ ++ + I Q
Sbjct: 232 YQLSNNEVIECITQ 245
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH------------KRPL 51
+ LL L+H + +++ G + +V EY G + + H L
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 52 KEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSF- 110
+ ++ I + G+ YL S +HRD+ N L+ E VK+ DFG + + +
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 111 VGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
VG WM PE I+ ++ + DVWSLG+
Sbjct: 186 VGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVV 219
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTA-WLVMEYCL-GSASDIIEVHKRP-LKEEEIAAI 59
A +S++ QL+H N ++ G + + ++V EY GS D + R L + +
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-WMA 118
V + YL +HRD+ A N+L++E K++DFG P W A
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 354
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE A+ E ++ K DVWS GI
Sbjct: 355 PE---ALREKKFSTKSDVWSFGI 374
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+ IG G FG V ++ VA+K + K A A L E + QL+H N ++
Sbjct: 198 LQTIGKGEFGDVMLGDYRGNK--VAVKCI----KNDATAQA-FLAEASVMTQLRHSNLVQ 250
Query: 227 YRGCYLRDHTA-WLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
G + + ++V EY GS D ++ G + C L
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVD-----------YLRSRGRSVLGGDC------LLK 293
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
F + V + YL +HRD+ A N+L++E K++DFG
Sbjct: 294 FSLD---------------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338
Query: 345 KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
P W APE A+ E ++ K DVWS GI E+
Sbjct: 339 ASSTQDTGKLPVKWTAPE---ALREKKFSTKSDVWSFGILLWEI 379
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 17 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 73
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 74 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 110
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 111 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 162
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 163 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 219
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 220 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 259
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 260 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 288
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 138 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 198 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 225
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 124/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 81
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 118
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 119 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 170
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 171 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 227
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 228 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 267
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 268 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 296
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 206 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 233
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 123/350 (35%), Gaps = 98/350 (28%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEK-WADIL 210
KE P K +R +GHG+FG VY + S VA+K L + C+E+ D L
Sbjct: 43 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT---LPEVCSEQDELDFL 99
Query: 211 KEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRL 270
E + + H N + G L+ ++++E G
Sbjct: 100 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG----------------------- 136
Query: 271 QQLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGN 325
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 137 -DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN 188
Query: 326 ILLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVD 376
LLT G K+ DFG A A + + WM PE + EG + K D
Sbjct: 189 CLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTD 245
Query: 377 VWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYF 436
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 246 TWSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP-- 285
Query: 437 NMNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 286 -KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A +
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 224 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 251
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 158 EDPEKIFEDLREIGHGSFGAV-----YYARCLVSREIVAIKKMSYLGKQCAEKWADILKE 212
E P K + +G G FG V ++ + VA+K + + D+L E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSE 76
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQ 271
L+Q+ HP+ I+ G +D L++EY GS + RE G G
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL------RESRKVGPGYLGS 130
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
+ +R L ++ + + +G+ YL + +HRD+ A NIL+ E
Sbjct: 131 GGSRNSSSLD----HPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEG 186
Query: 332 GTVKLADFGSASIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+K++DFG + +S V WMA E + + Y + DVWS G+
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLW 243
Query: 386 ELA 388
E+
Sbjct: 244 EIV 246
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 47/203 (23%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHK---------------- 48
++L+Q+ HP+ I+ G +D L++EY GS + +
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 49 -------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 101
R L ++ + + +G+ YL + +HRD+ A NIL+ E +K++DFG +
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 102 SIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLG------ITPGSLKDP 149
+S V WMA E + + Y + DVWS G +T G P
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 150 EIAELFDKEDPEKIFEDLREIGH 172
I PE++F +L + GH
Sbjct: 255 GIP-------PERLF-NLLKTGH 269
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+R L ++ + + +G+ YL + +HRD+ A NIL+ E +K+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 50 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 103
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 104 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 133
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 134 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 254 CSIGGIHEDYQLPYYDL 270
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 150
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTA-WLVMEYCL-GSASDIIEVHKRP-LKEEEIAAI 59
A +S++ QL+H N ++ G + + ++V EY GS D + R L + +
Sbjct: 54 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 113
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-WMA 118
V + YL +HRD+ A N+L++E K++DFG P W A
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 173
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE A+ E + K DVWS GI
Sbjct: 174 PE---ALREAAFSTKSDVWSFGI 193
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 45/224 (20%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
L+ IG G FG V ++ VA+K + K A A L E + QL+H N ++
Sbjct: 17 LQTIGKGEFGDVMLGDYRGNK--VAVKCI----KNDATAQA-FLAEASVMTQLRHSNLVQ 69
Query: 227 YRGCYLRDHTA-WLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
G + + ++V EY GS D ++ G + C L
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVD-----------YLRSRGRSVLGGDC------LLK 112
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
F + V + YL +HRD+ A N+L++E K++DFG
Sbjct: 113 FSLD---------------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 157
Query: 345 KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
P W APE A+ E + K DVWS GI E+
Sbjct: 158 ASSTQDTGKLPVKWTAPE---ALREAAFSTKSDVWSFGILLWEI 198
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 37 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 90
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 91 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 120
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 121 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 180
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 181 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 241 CSIGGIHEDYQLPYYDL 257
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 137
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 233
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 49/240 (20%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLG-----KQCAEKWADILKEIRFLRQLKHP 222
++IG G FG V+ R + + +VAIK + LG + EK+ + +E+ + L HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSL-ILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N ++ G L + +VME+ + C + L
Sbjct: 84 NIVKLYG--LMHNPPRMVMEF-----------------------------VPCGDLYHRL 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLT---ETGTV--K 335
+ P+K + + G+ Y+ + +HRD+++ NI L E V K
Sbjct: 113 LD---KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 336 LADFGSASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ADFG++ + S +G WMAPE I A +E Y K D +S + + + P+
Sbjct: 170 VADFGTSQQSVHSVSGLLGNFQWMAPETIGA-EEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++ L HPN ++ G L + +VME+ G + P+K + +
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 66 GLNYLHSLGR--IHRDVKAGNILLT---ETGTV--KLADFGSASIKCPANS-FVGTPYWM 117
G+ Y+ + +HRD+++ NI L E V K+ADFG++ + S +G WM
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWM 193
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE I A +E Y K D +S +
Sbjct: 194 APETIGA-EEESYTEKADTYSFAM 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCL----------GSASDIIEVHKRPLKEEEIAAICS 61
+H N + G ++ EYC + +D+ + RPL+ ++ S
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-----Y 115
V +G+ +L S IHRDV A N+LLT K+ DFG A I +N V
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE I + Y + DVWS GI
Sbjct: 228 WMAPESIF---DCVYTVQSDVWSYGI 250
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 100
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + L +H N + G ++ EYC G+ L
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCC--------------------YGDLLNF 140
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
L+ E A + E RPL+ ++ S V +G+ +L S IHRDV A N+LLT
Sbjct: 141 LRRKAE--ADLDKE-DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 197
Query: 333 TVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
K+ DFG A I +N V WMAPE I + Y + DVWS GI E
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWSYGILLWE 254
Query: 387 LAERK-PPYFNMNAMSALYHIAQN 409
+ PY + S Y + ++
Sbjct: 255 IFSLGLNPYPGILVNSKFYKLVKD 278
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 616 LVMEYCL----------GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 665
++ EYC + +D+ + RPL+ ++ S V +G+ +L S IHRDV
Sbjct: 127 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 186
Query: 666 KAGNILLTETGTVKL 680
A N+LLT K+
Sbjct: 187 AARNVLLTNGHVAKI 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 52 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 108
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 169 IKWTAPE---AINYGTFTIKSDVWSFGI 193
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 169 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 210
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 145
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 122/349 (34%), Gaps = 96/349 (27%)
Query: 157 KEDPEKIFEDLREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILK 211
KE P K +R +GHG+FG VY + S VA+K + + + E D L
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDE--LDFLM 97
Query: 212 EIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQ 271
E + + H N + G L+ ++++E G
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG------------------------ 133
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAA-----ICSGVLRGLNYLHSLGRIHRDVKAGNI 326
LK F E RP + +A + + G YL IHRD+ A N
Sbjct: 134 DLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC 186
Query: 327 LLTETG---TVKLADFGSASIKCPANSF------VGTPYWMAPEVILAMDEGQYDGKVDV 377
LLT G K+ DFG A A+ + + WM PE + EG + K D
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTDT 243
Query: 378 WSLGITCIELAERKPPYFNMNAMSALYHIAQNDTPCLQSSDWSVIKTISSTAERKPPYFN 437
WS G+ E+ F++ M P S+ V++ ++S PP
Sbjct: 244 WSFGVLLWEI-------FSLGYM-----------PYPSKSNQEVLEFVTSGGRMDPP--- 282
Query: 438 MNAMSALYHIAQNDTPCLQSSDWSDTFAHFVSSCLAKNPADRPSSGRLL 486
N +Y I ++ C P DRP+ +L
Sbjct: 283 KNCPGPVYRI--------------------MTQCWQHQPEDRPNFAIIL 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGS--ASDIIEVHKRPLKEEEIAA-----I 59
++ + H N + G L+ ++++E G S + E RP + +A +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETG---TVKLADFGSASIKCPANSF------ 110
+ G YL IHRD+ A N LLT G K+ DFG A A+ +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 111 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ WM PE + EG + K D WS G+
Sbjct: 221 MLPVKWMPPEAFM---EGIFTSKTDTWSFGV 248
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 119
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 180 IKWTAPE---AINYGTFTIKSDVWSFGI 204
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 180 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 156
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYCL----------GSASDIIEVHKRPLKEEEIAAICS 61
+H N + G ++ EYC + +D+ + RPL+ ++ S
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 62 GVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-----Y 115
V +G+ +L S IHRDV A N+LLT K+ DFG A I +N V
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 116 WMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE I + Y + DVWS GI
Sbjct: 220 WMAPESIF---DCVYTVQSDVWSYGI 242
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 107/274 (39%), Gaps = 59/274 (21%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 92
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + L +H N + G ++ EYC
Sbjct: 93 KIMSHLGQHENIVNLLGACTHGGPVLVITEYC---------------------------- 124
Query: 273 LKCFTEHFALFNFEVHK----------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVK 322
C+ + L NF K RPL+ ++ S V +G+ +L S IHRDV
Sbjct: 125 --CYGD---LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVA 179
Query: 323 AGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVD 376
A N+LLT K+ DFG A I +N V WMAPE I + Y + D
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSD 236
Query: 377 VWSLGITCIELAERK-PPYFNMNAMSALYHIAQN 409
VWS GI E+ PY + S Y + ++
Sbjct: 237 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 616 LVMEYCL----------GSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDV 665
++ EYC + +D+ + RPL+ ++ S V +G+ +L S IHRDV
Sbjct: 119 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 178
Query: 666 KAGNILLTETGTVKL 680
A N+LLT K+
Sbjct: 179 AARNVLLTNGHVAKI 193
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 31 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 89
LV +Y LGS D + H+ L + + + +G+ YL G +HR++ A N+LL
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 168
Query: 90 TGTVKLADFGSASIKCPAN-----SFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGIT 142
V++ADFG A + P + S TP WMA E I G+Y + DVWS G+T
Sbjct: 169 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI---HFGKYTHQSDVWSYGVT 224
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 304 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN-----SFVGTPY-W 357
+ +G+ YL G +HR++ A N+LL V++ADFG A + P + S TP W
Sbjct: 142 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 358 MAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
MA E I G+Y + DVWS G+T EL
Sbjct: 202 MALESI---HFGKYTHQSDVWSYGVTVWEL 228
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLV +Y LGS D + H+ L + + + +G+ YL G +HR++ A N+L
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 165
Query: 672 LTETGTVKL 680
L V++
Sbjct: 166 LKSPSQVQV 174
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 118
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 179 IKWTAPE---AINYGTFTIKSDVWSFGI 203
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 179 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 220
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 155
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 158 EDPEKIFEDLREIGHGSFGAV-----YYARCLVSREIVAIKKMSYLGKQCAEKWADILKE 212
E P K + +G G FG V ++ + VA+K + + D+L E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSE 76
Query: 213 IRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHWIEREFHVEGMGNRLQ 271
L+Q+ HP+ I+ G +D L++EY GS + RE G G
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL------RESRKVGPGYLGS 130
Query: 272 QLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
+ +R L ++ + + +G+ YL + +HRD+ A NIL+ E
Sbjct: 131 GGSRNSSSLD----HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
Query: 332 GTVKLADFGSASIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCI 385
+K++DFG + +S V WMA E + + Y + DVWS G+
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLW 243
Query: 386 ELA 388
E+
Sbjct: 244 EIV 246
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 47/203 (23%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHK---------------- 48
++L+Q+ HP+ I+ G +D L++EY GS + +
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 49 -------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 101
R L ++ + + +G+ YL + +HRD+ A NIL+ E +K++DFG +
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 102 SIKCPANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLG------ITPGSLKDP 149
+S V WMA E + + Y + DVWS G +T G P
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 150 EIAELFDKEDPEKIFEDLREIGH 172
I PE++F +L + GH
Sbjct: 255 GIP-------PERLF-NLLKTGH 269
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+R L ++ + + +G+ YL + +HRD+ A NIL+ E +K+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 119
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 180 IKWTAPE---AINYGTFTIKSDVWSFGI 204
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 180 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 156
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 122
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 183 IKWTAPE---AINYGTFTIKSDVWSFGI 207
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 183 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 224
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 159
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 77 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 194 VKWYAPECI---NYYKFSSKSDVWSFGV 218
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 101 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 159
Query: 672 LTETGTVKL 680
L K+
Sbjct: 160 LVTQHYAKI 168
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 77 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 133
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 194 VKWYAPECI---NYYKFSSKSDVWSFGV 218
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 101 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 159
Query: 672 LTETGTVKL 680
L K+
Sbjct: 160 LVTQHYAKI 168
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 113
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGI 198
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 115
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 176 IKWTAPE---AINYGTFTIKSDVWSFGI 200
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 176 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 217
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 152
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 121
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 182 IKWTAPE---AINYGTFTIKSDVWSFGI 206
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 182 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 223
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 158
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 114
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 175 IKWTAPE---AINYGTFTIKSDVWSFGI 199
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 175 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 216
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 151
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 113
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGI 198
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 67
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 68 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 97
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 98 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 157
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 158 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 218 CSIGGIHEDYQLPYYDL 234
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 114
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 123
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 184 IKWTAPE---AINYGTFTIKSDVWSFGI 208
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 184 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 225
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 160
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 113
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV--GTPY- 115
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + A G +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGI 198
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV--GTPY- 356
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + A G +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 357 --WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 65
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 66 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 95
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 96 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 155
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 156 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 216 CSIGGIHEDYQLPYYDL 232
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 112
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 61 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 117
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 178 VKWYAPECI---NYYKFSSKSDVWSFGV 202
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 164 DENXYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 85 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 143
Query: 672 LTETGTVKL 680
L K+
Sbjct: 144 LVTQHYAKI 152
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + + +++ EY +++ K P L ++
Sbjct: 57 AEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 113
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGI 198
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHRD++A NIL+++T + K+ADFG A + + A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMN 398
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 174 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 644 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ + + G+ ++ IHRD++A NIL+++T + K+
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 70
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 71 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 100
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 101 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 160
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 161 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 221 CSIGGIHEDYQLPYYDL 237
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 117
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 31 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 89
LV +Y LGS D + H+ L + + + +G+ YL G +HR++ A N+LL
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 150
Query: 90 TGTVKLADFGSASIKCPAN-----SFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGIT 142
V++ADFG A + P + S TP WMA E I G+Y + DVWS G+T
Sbjct: 151 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI---HFGKYTHQSDVWSYGVT 206
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 304 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN-----SFVGTPY-W 357
+ +G+ YL G +HR++ A N+LL V++ADFG A + P + S TP W
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 358 MAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
MA E I G+Y + DVWS G+T EL
Sbjct: 184 MALESI---HFGKYTHQSDVWSYGVTVWEL 210
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S QLV +Y LGS D + H+ L + + + +G+ YL G +HR++ A N+L
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 147
Query: 672 LTETGTVKL 680
L V++
Sbjct: 148 LKSPSQVQV 156
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 57 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 113
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 174 VKWYAPECI---NYYKFSSKSDVWSFGV 198
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 100 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 81 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 139
Query: 672 LTETGTVKL 680
L K+
Sbjct: 140 LVTQHYAKI 148
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 50/259 (19%)
Query: 165 EDLR---EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKH 221
E LR ++G G FG V+ + VAIK + G E + L+E + +++L+H
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAF---LQEAQVMKKLRH 321
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
++ + + ++V EY G+ L LK T +
Sbjct: 322 EKLVQLYAV-VSEEPIYIVTEYM--------------------SKGSLLDFLKGETGKY- 359
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG
Sbjct: 360 ----------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 409
Query: 342 ASI----KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYF 395
A + + A P W APE L G++ K DVWS GI EL + + PY
Sbjct: 410 ARLIEDNEYTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYP 466
Query: 396 NMNAMSALYHIAQN-DTPC 413
M L + + PC
Sbjct: 467 GMVNREVLDQVERGYRMPC 485
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 313 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 432 APEAALY---GRFTIKSDVWSFGI 452
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 397
Query: 674 ETGTVKL 680
E K+
Sbjct: 398 ENLVCKV 404
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 75 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 131
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 192 VKWYAPECI---NYYKFSSKSDVWSFGV 216
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 118 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 177
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 99 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 157
Query: 672 LTETGTVKL 680
L K+
Sbjct: 158 LVTQHYAKI 166
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 65/257 (25%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
IG G FG V+ + E VA+K S ++ + A+I + + L+H N + +
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 64
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+D+ W + W+ ++H EH +LF++ +++
Sbjct: 65 ADNKDNGTWTQL--------------WLVSDYH---------------EHGSLFDY-LNR 94
Query: 290 RPLKEEEIAAICSGVLRGLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGS 341
+ E + + GL +LH + G+ HRD+K+ NIL+ + GT +AD G
Sbjct: 95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154
Query: 342 A--------SIKCPANSFVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAER 390
A +I N VGT +MAPEV+ + M + + D++++G+ E+A R
Sbjct: 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
Query: 391 ----------KPPYFNM 397
+ PY+++
Sbjct: 215 CSIGGIHEDYQLPYYDL 231
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 11 LKHPNTIEYRGCYLRDHTAW----LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
L+H N + + +D+ W LV +Y GS D + ++ + E + +
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTAS 111
Query: 66 GLNYLH-----SLGR---IHRDVKAGNILLTETGTVKLADFGSA--------SIKCPANS 109
GL +LH + G+ HRD+K+ NIL+ + GT +AD G A +I N
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 110 FVGTPYWMAPEVI---LAMDEGQYDGKVDVWSLGIT 142
VGT +MAPEV+ + M + + D++++G+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 61 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 117
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 178 VKWYAPECI---NYYKFSSKSDVWSFGV 202
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 164 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 85 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 143
Query: 672 LTETGTVKL 680
L K+
Sbjct: 144 LVTQHYAKI 152
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 67 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 123
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 184 VKWYAPECI---NYYKFSSKSDVWSFGV 208
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 170 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 91 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 149
Query: 672 LTETGTVKL 680
L K+
Sbjct: 150 LVTQHYAKI 158
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 55 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 111
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 172 VKWYAPECI---NYYKFSSKSDVWSFGV 196
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKC 346
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 98 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 157
Query: 347 PANSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 158 DENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 613 SPQLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
S LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+L
Sbjct: 79 SWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 137
Query: 672 LTETGTVKL 680
L K+
Sbjct: 138 LVTQHYAKI 146
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KH 221
+ +G G+FG V A + VA+K + G +E A ++ E++ L + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHSEHRA-LMSELKILIHIGHH 90
Query: 222 PNTIEYRG-CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
N + G C +++E+C GN L+ F
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFC--------------------KFGNLSTYLRSKRNEF 130
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
+ +++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG
Sbjct: 131 VPYK-DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 341 SAS--IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
A K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 239
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 234
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 337 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 394 VERGYRMPC 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 230 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 349 APEAALY---GRFTIKSDVWSFGI 369
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 314
Query: 674 ETGTVKL 680
E K+
Sbjct: 315 ENLVCKV 321
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 337 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 394 VERGYRMPC 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 230 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 349 APEAALY---GRFTIKSDVWSFGI 369
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 314
Query: 674 ETGTVKL 680
E K+
Sbjct: 315 ENLVCKV 321
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V+EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 148
Query: 674 ETGTVKL 680
E K+
Sbjct: 149 ENLVCKV 155
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
++G G +G VY VA+K + K+ + + LKE ++++KHPN ++
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
G + ++V EY GN L L+ E +
Sbjct: 95 GVCTLEPPFYIVTEYM--------------------PYGNLLDYLR-----------ECN 123
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC-- 346
+ + + + + + + YL IHRD+ A N L+ E VK+ADFG + +
Sbjct: 124 REEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183
Query: 347 PANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+ G + W APE ++ + K DVW+ G+ E+A
Sbjct: 184 TYTAHAGAKFPIKWTAPE---SLAYNTFSIKSDVWAFGVLLWEIA 225
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAI---- 59
+++++++KHPN ++ G + ++V EY G+ D + R EE+ A+
Sbjct: 79 AAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----RECNREEVTAVVLLY 134
Query: 60 -CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKC--PANSFVGTPY- 115
+ + + YL IHRD+ A N L+ E VK+ADFG + + + G +
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE ++ + K DVW+ G+
Sbjct: 195 IKWTAPE---SLAYNTFSIKSDVWAFGV 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V+EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V+EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 148
Query: 674 ETGTVKL 680
E K+
Sbjct: 149 ENLVCKV 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 161 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 217
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 218 VERGYRMPC 226
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + +V EY GS D ++ + L+ ++ + +
Sbjct: 54 AQVMKKLRHEKLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 172
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 173 APEAALY---GRFTIKSDVWSFGI 193
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 79 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 138
Query: 674 ETGTVKL 680
E K+
Sbjct: 139 ENLVCKV 145
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 337 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 394 VERGYRMPC 402
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 230 AQVMKKLRHEKLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 349 APEAALY---GRFTIKSDVWSFGI 369
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 321
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 39/234 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KH 221
+ +G G+FG V A + VA+K + G +E A ++ E++ L + H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHSEHRA-LMSELKILIHIGHH 92
Query: 222 PNTIEYRG-CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
N + G C +++E+C GN L+ F
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFC--------------------KFGNLSTYLRSKRNEF 132
Query: 281 ALFNFE-VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
+ E ++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DF
Sbjct: 133 VPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDF 192
Query: 340 GSAS--IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
G A K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 243
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 238
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 189
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++VMEY G D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+VMEY G D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 89 IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 148
Query: 674 ETGTVKL 680
E K+
Sbjct: 149 ENLVCKV 155
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 101/255 (39%), Gaps = 37/255 (14%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHP 222
RE+G G+FG V+ A C + +VA+K L D +E L L+H
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKA---LKDPTLAARKDFQREAELLTNLQHE 77
Query: 223 NTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
+ +++ G +V EY G + + H + V+G +
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA----------- 126
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
K L ++ I S + G+ YL S +HRD+ N L+ VK+ DFG
Sbjct: 127 -------KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 342 ASIKCPANSF-VGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPY 394
+ + + VG WM PE I+ ++ + DVWS G+ E+ K P+
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPW 236
Query: 395 FNMNAMSALYHIAQN 409
F ++ + I Q
Sbjct: 237 FQLSNTEVIECITQG 251
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH---------------K 48
+ LL L+H + +++ G +V EY G + + H K
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 49 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPAN 108
L ++ I S + G+ YL S +HRD+ N L+ VK+ DFG + +
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 109 SF-VGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
+ VG WM PE I+ ++ + DVWS G+
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGV 223
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++++H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 100 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 159
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 160 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 216
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 217 VERGYRMPC 225
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 53 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 112 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 171
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 172 APEAALY---GRFTIKSDVWSFGI 192
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 100 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 144
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 102 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 161
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 162 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 218
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 219 VERGYRMPC 227
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 55 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 174 APEAALY---GRFTIKSDVWSFGI 194
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 102 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 146
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 102/267 (38%), Gaps = 66/267 (24%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIV----AIK 193
++GI G + + + + + F+ ++ +G G+FG VY + E V AIK
Sbjct: 2 AMGIRSGEAPNQALLRILKETE----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK 57
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
++ A K +IL E + + +P+ G CL S +I
Sbjct: 58 ELREATSPKANK--EILDEAYVMASVDNPHVCRLLGI-------------CLTSTVQLI- 101
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+L C ++ HK + + + C + +G+NYL
Sbjct: 102 --------------TQLMPFGCLLDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAP 360
+HRD+ A N+L+ VK+ DFG A + K P WMA
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-------WMAL 195
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E IL Y + DVWS G+T EL
Sbjct: 196 ESIL---HRIYTHQSDVWSYGVTVWEL 219
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 191
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 192 --WMALESIL---HRIYTHQSDVWSYGVT 215
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 165
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 104 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 163
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 164 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 220
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 221 VERGYRMPC 229
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 57 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 176 APEAALY---GRFTIKSDVWSFGI 196
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 82 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 141
Query: 674 ETGTVKL 680
E K+
Sbjct: 142 ENLVCKV 148
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 52/257 (20%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P + + ++++G G FG V+ S + VA+K + K L+E ++
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTL----KPGTMSVQAFLEEANLMK 62
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
L+H + ++ +++ E+ GS D ++ EG L +L F
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSD--------EGGKVLLPKLIDF 114
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
+ A G+ Y+ IHRD++A N+L++E+ K+
Sbjct: 115 SAQIA------------------------EGMAYIERKNYIHRDLRAANVLVSESLMCKI 150
Query: 337 ADFGSASIKCPANSFV---GTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 390
ADFG A + N + G + W APE A++ G + K +VWS GI E+
Sbjct: 151 ADFGLARV-IEDNEYTAREGAKFPIKWTAPE---AINFGCFTIKSNVWSFGILLYEIVTY 206
Query: 391 -KPPY---FNMNAMSAL 403
K PY N + MSAL
Sbjct: 207 GKIPYPGRTNADVMSAL 223
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKR-PLKEEEIAAICSG 62
++L++ L+H + ++ +++ E+ GS D ++ + + ++ +
Sbjct: 58 ANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 117
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV---GTPY---W 116
+ G+ Y+ IHRD++A N+L++E+ K+ADFG A + N + G + W
Sbjct: 118 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKW 176
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGI 141
APE A++ G + K +VWS GI
Sbjct: 177 TAPE---AINFGCFTIKSNVWSFGI 198
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+ G+ Y+ IHRD++A N+L++E+ K+
Sbjct: 118 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 150
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT 167
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 168 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 224
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 225 VERGYRMPC 233
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 61 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT 179
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 180 APEAALY---GRFTIKSDVWSFGI 200
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 86 IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG 145
Query: 674 ETGTVKL 680
E K+
Sbjct: 146 ENLVCKV 152
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 92/255 (36%), Gaps = 54/255 (21%)
Query: 170 IGHGSFGAVYYARCLV---SREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
IG G FG V R VAIK + G + + L E + Q +HPN I
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLK--GGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G ++ E+ A D L+ F +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSF--------------------LRLNDGQFTVI--- 118
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG------ 340
++ + G+ G+ YL + +HRD+ A NIL+ K++DFG
Sbjct: 119 ---------QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 169
Query: 341 -SASIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKPPY 394
++S +S G W APE I ++ D WS GI E ER PY
Sbjct: 170 ENSSDPTETSSLGGKIPIRWTAPEAIAFR---KFTSASDAWSYGIVMWEVMSFGER--PY 224
Query: 395 FNMNAMSALYHIAQN 409
++M+ + I Q+
Sbjct: 225 WDMSNQDVINAIEQD 239
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASD-IIEVHKRPLKEEEIAAICSGV 63
+S++ Q +HPN I G ++ E+ A D + ++ ++ + G+
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 127
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-------SASIKCPANSFVGT--P 114
G+ YL + +HRD+ A NIL+ K++DFG ++S +S G
Sbjct: 128 ASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 115 YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
W APE I ++ D WS GI
Sbjct: 188 RWTAPEAIAFR---KFTSASDAWSYGIV 212
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV 159
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 419 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 475
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 536 VKWYAPECI---NYYKFSSKSDVWSFGV 560
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPA 348
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 464 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
Query: 349 NSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 524 NYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+LL
Sbjct: 446 LVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT 504
Query: 675 TGTVKL 680
K+
Sbjct: 505 QHYAKI 510
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY G D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG A + +
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 168 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 224
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 225 VERGYRMPC 233
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 61 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG A + + A P W
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 179
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 180 APEAALY---GRFTIKSDVWSFGI 200
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEYC-LGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 86 IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG 145
Query: 674 ETGTVKL 680
E K+
Sbjct: 146 ENLVCKV 152
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 287 VHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTVKLADFGSA 342
+HKR E E + + V L++LH+ G HRD+K NIL + VK+ DF
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
Query: 343 S-IKCPAN----------SFVGTPYWMAPEVILAMDEGQ--YDGKVDVWSLGITCIELAE 389
S IK + + G+ +MAPEV+ A E YD + D+WSLG+ L
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 390 RKPPY 394
PP+
Sbjct: 222 GYPPF 226
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 30 WLVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL- 87
+LV E G S + +HKR E E + + V L++LH+ G HRD+K NIL
Sbjct: 87 YLVFEKMRG-GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 88 --TETGTVKLADFGSAS-IKCPAN----------SFVGTPYWMAPEVILAMDEGQ--YDG 132
+ VK+ DF S IK + + G+ +MAPEV+ A E YD
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 133 KVDVWSLGI 141
+ D+WSLG+
Sbjct: 206 RCDLWSLGV 214
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LV E G S + +HKR E E + + V L++LH+ G HRD+K NIL
Sbjct: 88 LVFEKMRG-GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 675 TGTV 678
V
Sbjct: 147 PNQV 150
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 106
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 107 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 162 GRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 211
Query: 387 L 387
L
Sbjct: 212 L 212
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 185 --WMALESIL---HRIYTHQSDVWSYGVT 208
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAW-LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC 60
A +++++QL +P + G + + +W LVME LG + ++ R +K++ I +
Sbjct: 420 AEANVMQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELV 476
Query: 61 SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPANSFVGTPY---- 115
V G+ YL +HRD+ A N+LL K++DFG S +++ N + +
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE I + ++ K DVWS G+
Sbjct: 537 VKWYAPECI---NYYKFSSKSDVWSFGV 561
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-SASIKCPA 348
R +K++ I + V G+ YL +HRD+ A N+LL K++DFG S +++
Sbjct: 465 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
Query: 349 NSFVGTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYFNMNA 399
N + + W APE I + ++ K DVWS G+ E + + PY M
Sbjct: 525 NYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
LVME LG + ++ R +K++ I + V G+ YL +HRD+ A N+LL
Sbjct: 447 LVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT 505
Query: 675 TGTVKL 680
K+
Sbjct: 506 QHYAKI 511
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 170 IGHGSFGAVYYARCLVS---REI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
IG G FG VY S +E+ VAIK K Y KQ D L E + Q H N
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV----DFLGEAGIMGQFSHHN 107
Query: 224 TIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALF 283
I G + ++ EY A D +F E G F++
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALD---------KFLREKDG-----------EFSVL 147
Query: 284 NFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS 343
++ + G+ G+ YL ++ +HRD+ A NIL+ K++DFG +
Sbjct: 148 ------------QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195
Query: 344 I--KCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL---AERKPP 393
+ P ++ + W APE A+ ++ DVWS GI E+ ER P
Sbjct: 196 VLEDDPEATYTTSGGKIPIRWTAPE---AISYRKFTSASDVWSFGIVMWEVMTYGER--P 250
Query: 394 YFNMN 398
Y+ ++
Sbjct: 251 YWELS 255
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASD-IIEVHKRPLKEEEIAAICSGV 63
+ ++ Q H N I G + ++ EY A D + ++ + G+
Sbjct: 97 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 156
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTP-----YW 116
G+ YL ++ +HRD+ A NIL+ K++DFG + + P ++ + W
Sbjct: 157 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE A+ ++ DVWS GI
Sbjct: 217 TAPE---AISYRKFTSASDVWSFGIV 239
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL ++ +HRD+ A NIL+ K+
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKV 188
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDII---EVHKRPLKEEEIAAI 59
A +++++ L+H ++ ++ + GS D + E K+PL + +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK--LIDF 283
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI--KCPANSFVGTPYWM 117
+ + G+ ++ IHRD++A NIL++ + K+ADFG A + K P W
Sbjct: 284 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-------WT 336
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE A++ G + K DVWS GI
Sbjct: 337 APE---AINFGSFTIKSDVWSFGI 357
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 276 FTEHFALFNF----EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
F +L +F E K+PL + + + + G+ ++ IHRD++A NIL++ +
Sbjct: 257 FMAKGSLLDFLKSDEGSKQPLPK--LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 314
Query: 332 GTVKLADFGSASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 389
K+ADFG A + K P W APE A++ G + K DVWS GI +E+
Sbjct: 315 LVCKIADFGLARVGAKFPIK-------WTAPE---AINFGSFTIKSDVWSFGILLMEIVT 364
Query: 390 R-KPPYFNMN 398
+ PY M+
Sbjct: 365 YGRIPYPGMS 374
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 73
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 74 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 210
Query: 384 CIEL 387
EL
Sbjct: 211 VWEL 214
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 186
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 187 --WMALESIL---HRIYTHQSDVWSYGVT 210
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 102 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLG-----KQCAEKWADILKEIRFLRQLKHP 222
++IG G FG V+ R + + +VAIK + LG + EK+ + +E+ + L HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSL-ILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N ++ G L + +VME+ + C + L
Sbjct: 84 NIVKLYG--LMHNPPRMVMEF-----------------------------VPCGDLYHRL 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLT---ETGTV--K 335
+ P+K + + G+ Y+ + +HRD+++ NI L E V K
Sbjct: 113 LD---KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 336 LADFGSASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ADFG + + S +G WMAPE I A +E Y K D +S + + + P+
Sbjct: 170 VADFGLSQQSVHSVSGLLGNFQWMAPETIGA-EEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++ L HPN ++ G L + +VME+ G + P+K + +
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 66 GLNYLHSLGR--IHRDVKAGNILLT---ETGTV--KLADFGSASIKCPANS-FVGTPYWM 117
G+ Y+ + +HRD+++ NI L E V K+ADFG + + S +G WM
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWM 193
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE I A +E Y K D +S +
Sbjct: 194 APETIGA-EEESYTEKADTYSFAM 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 168 REIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQL-KH 221
+ +G G+FG V A + VA+K + G +E A ++ E++ L + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHSEHRA-LMSELKILIHIGHH 90
Query: 222 PNTIEYRG-CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHF 280
N + G C +++E+C GN L+ F
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFC--------------------KFGNLSTYLRSKRNEF 130
Query: 281 ALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG 340
+ +++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG
Sbjct: 131 VPYK-DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 341 SAS--IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
A K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 239
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 234
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 102/267 (38%), Gaps = 66/267 (24%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIV----AIK 193
++GI G + + + + + F+ ++ +G G+FG VY + E V AIK
Sbjct: 2 AMGIRSGEAPNQALLRILKETE----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK 57
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
++ A K +IL E + + +P+ G CL S +I
Sbjct: 58 ELREATSPKANK--EILDEAYVMASVDNPHVCRLLGI-------------CLTSTVQLI- 101
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+L C ++ HK + + + C + +G+NYL
Sbjct: 102 --------------TQLMPFGCLLDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAP 360
+HRD+ A N+L+ VK+ DFG A + K P WMA
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMAL 195
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E IL Y + DVWS G+T EL
Sbjct: 196 ESIL---HRIYTHQSDVWSYGVTVWEL 219
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 191
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 192 --WMALESIL---HRIYTHQSDVWSYGVT 215
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 165
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 92/239 (38%), Gaps = 49/239 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKK-MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+G G FG V + E VAIK+ L + E+W EI+ +++L HPN + R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC---LEIQIMKKLNHPNVVSAR 78
Query: 229 GC------YLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ L MEYC G G+ + L F L
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEG--------------------GDLRKYLNQFENCCGL 118
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
KE I + S + L YLH IHRD+K NI+L + K+ D
Sbjct: 119 ----------KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168
Query: 340 GSASIKCPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
G A FVGT ++APE+ +++ +Y VD WS G E P+
Sbjct: 169 GYAKELDQGELCTEFVGTLQYLAPEL---LEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 6 SLLRQLKHPNTIEYRGC------YLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEE 54
++++L HPN + R + L MEYC G D+ + + LKE
Sbjct: 64 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLRKYLNQFENCCGLKEG 121
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPA---N 108
I + S + L YLH IHRD+K NI+L + K+ D G A
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
FVGT ++APE+ +++ +Y VD WS G
Sbjct: 182 EFVGTLQYLAPEL---LEQKKYTVTVDYWSFG 210
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 614 PQLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAG 668
P L MEYC G D+ + + LKE I + S + L YLH IHRD+K
Sbjct: 93 PLLAMEYCEGG--DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPE 150
Query: 669 NILL 672
NI+L
Sbjct: 151 NIVL 154
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 92/239 (38%), Gaps = 49/239 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKK-MSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
+G G FG V + E VAIK+ L + E+W EI+ +++L HPN + R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC---LEIQIMKKLNHPNVVSAR 79
Query: 229 GC------YLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ L MEYC G G+ + L F L
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEG--------------------GDLRKYLNQFENCCGL 119
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADF 339
KE I + S + L YLH IHRD+K NI+L + K+ D
Sbjct: 120 ----------KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDL 169
Query: 340 GSASIKCPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYF 395
G A FVGT ++APE+ +++ +Y VD WS G E P+
Sbjct: 170 GYAKELDQGELCTEFVGTLQYLAPEL---LEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 6 SLLRQLKHPNTIEYRGC------YLRDHTAWLVMEYCLGSASDIIEVHKR-----PLKEE 54
++++L HPN + R + L MEYC G D+ + + LKE
Sbjct: 65 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLRKYLNQFENCCGLKEG 122
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT---ETGTVKLADFGSASIKCPA---N 108
I + S + L YLH IHRD+K NI+L + K+ D G A
Sbjct: 123 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 182
Query: 109 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
FVGT ++APE+ +++ +Y VD WS G
Sbjct: 183 EFVGTLQYLAPEL---LEQKKYTVTVDYWSFG 211
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 614 PQLVMEYCLGSASDIIEVHKR-----PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAG 668
P L MEYC G D+ + + LKE I + S + L YLH IHRD+K
Sbjct: 94 PLLAMEYCEGG--DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPE 151
Query: 669 NILL 672
NI+L
Sbjct: 152 NIVL 155
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 56/237 (23%)
Query: 173 GSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYL 232
G FG V+ A+ L E VA+K KQ W + E+ L +KH N +++ G
Sbjct: 35 GRFGCVWKAQLL--NEYVAVKIFPIQDKQ---SWQNEY-EVYSLPGMKHENILQFIGAEK 88
Query: 233 RDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPL 292
R G++ D+ W+ FH +G +L +F + +
Sbjct: 89 R------------GTSVDVD--LWLITAFHEKG---------------SLSDF-LKANVV 118
Query: 293 KEEEIAAICSGVLRGLNYLH----------SLGRIHRDVKAGNILLTETGTVKLADFGSA 342
E+ I + RGL YLH HRD+K+ N+LL T +ADFG A
Sbjct: 119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 343 SIKCPA-------NSFVGTPYWMAPEVILAMDEGQYDG--KVDVWSLGITCIELAER 390
+K A + VGT +MAPEV+ Q D ++D++++G+ ELA R
Sbjct: 179 -LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 27/156 (17%)
Query: 11 LKHPNTIEYRGCYLR----DHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+KH N +++ G R D WL+ + GS SD ++ + + E+ I + R
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMAR 132
Query: 66 GLNYLH----------SLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPA-------N 108
GL YLH HRD+K+ N+LL T +ADFG A +K A +
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTH 191
Query: 109 SFVGTPYWMAPEVILAMDEGQYDG--KVDVWSLGIT 142
VGT +MAPEV+ Q D ++D++++G+
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 40/271 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 85
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGM------ 266
+ + L +H N + G ++ EYC D++ +++ R+ E M
Sbjct: 86 KIMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLL--NFLRRK--AEAMLGPSLA 139
Query: 267 -GNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 325
G + L + RPL+ ++ S V +G+ +L S IHRDV A N
Sbjct: 140 PGQDPEGLD-----------KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 188
Query: 326 ILLTETGTVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWS 379
+LLT K+ DFG A I +N V WMAPE I + Y + DVWS
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWS 245
Query: 380 LGITCIELAERK-PPYFNMNAMSALYHIAQN 409
GI E+ PY + S Y + ++
Sbjct: 246 YGILLWEIFSLGLNPYPGILVNSKFYKLVKD 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 49 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPA 107
RPL+ ++ S V +G+ +L S IHRDV A N+LLT K+ DFG A I +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 108 NSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
N V WMAPE I + Y + DVWS GI
Sbjct: 213 NYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWSYGI 248
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 634 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
RPL+ ++ S V +G+ +L S IHRDV A N+LLT K+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 199
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 20 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 77
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 78 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 109
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 110 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 164
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 165 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 214
Query: 384 CIEL 387
EL
Sbjct: 215 VWEL 218
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 136 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 190
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 191 --WMALESIL---HRIYTHQSDVWSYGVT 214
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 164
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP----LKEEEIAA 58
A ++L++QL+H + ++ +++ EY +++ K P L ++
Sbjct: 53 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYM--ENGSLVDFLKTPSGIKLTINKLLD 109
Query: 59 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 114
+ + + G+ ++ IHR+++A NIL+++T + K+ADFG A + + A P
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 115 Y-WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 170 IKWTAPE---AINYGTFTIKSDVWSFGI 194
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 300 ICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTP 355
+ + + G+ ++ IHR+++A NIL+++T + K+ADFG A + + A P
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 356 Y-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNM 397
W APE A++ G + K DVWS GI E+ + PY M
Sbjct: 170 IKWTAPE---AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 210
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 26 DHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 85
D ++VMEY G + + K P+ E IA + +L L+YLHS+G ++ D+K NI
Sbjct: 156 DPVGYIVMEYVGGQSLKRSKGQKLPVAEA-IAYLLE-ILPALSYLHSIGLVYNDLKPENI 213
Query: 86 LLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVI 122
+LTE +KL D G+ S GTP + APE++
Sbjct: 214 MLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQAPEIV 249
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 46/201 (22%)
Query: 170 IGHGSFGAVYYA--RCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEY 227
I HG G +Y A R + R +V +K + + G A+ A ++ FL ++ HP+ ++
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVV-LKGLVHSGDAEAQAMAMAERQ--FLAEVVHPSIVQI 144
Query: 228 RGCYLR-----DHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
D ++VMEY G Q LK
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGG------------------------QSLK-------- 172
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+ K P+ E IA + +L L+YLHS+G ++ D+K NI+LTE +KL D G+
Sbjct: 173 -RSKGQKLPVAEA-IAYLLE-ILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV 228
Query: 343 SIKCPANSFVGTPYWMAPEVI 363
S GTP + APE++
Sbjct: 229 SRINSFGYLYGTPGFQAPEIV 249
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
+VMEY G + + K P+ E IA + +L L+YLHS+G ++ D+K NI+LTE
Sbjct: 161 IVMEYVGGQSLKRSKGQKLPVAEA-IAYLLE-ILPALSYLHSIGLVYNDLKPENIMLTE 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 74
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 75 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 106
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 211
Query: 384 CIEL 387
EL
Sbjct: 212 VWEL 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 187
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 188 --WMALESIL---HRIYTHQSDVWSYGVT 211
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 103 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 74
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 75 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 106
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 211
Query: 384 CIEL 387
EL
Sbjct: 212 VWEL 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 188 ----WMALESIL---HRIYTHQSDVWSYGVT 211
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 103 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 39 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 96
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 97 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 128
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 129 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 183
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 184 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 233
Query: 384 CIEL 387
EL
Sbjct: 234 VWEL 237
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 209
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 210 ----WMALESIL---HRIYTHQSDVWSYGVT 233
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 125 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 183
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 73
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 74 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 210
Query: 384 CIEL 387
EL
Sbjct: 211 VWEL 214
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 186
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 187 --WMALESIL---HRIYTHQSDVWSYGVT 210
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 102 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 84
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 85 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 116
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 117 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 171
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 172 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 221
Query: 387 L 387
L
Sbjct: 222 L 222
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 140 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 194
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 195 --WMALESIL---HRIYTHQSDVWSYGVT 218
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 110 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 168
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 74
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 75 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 106
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 211
Query: 384 CIEL 387
EL
Sbjct: 212 VWEL 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 188 ----WMALESIL---HRIYTHQSDVWSYGVT 211
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 103 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 106
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 107 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 162 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 211
Query: 387 L 387
L
Sbjct: 212 L 212
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 185 ----WMALESIL---HRIYTHQSDVWSYGVT 208
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 78
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 79 DNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCLLDY 110
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 111 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 166 GRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 215
Query: 387 L 387
L
Sbjct: 216 L 216
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 154 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 203
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 204 SDVWSYGVT 212
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 96 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 155
Query: 674 ETGTVKL 680
VK+
Sbjct: 156 TPQHVKI 162
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 68
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 69 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 100
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 101 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 155
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 156 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 205
Query: 387 L 387
L
Sbjct: 206 L 206
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 178
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 179 ----WMALESIL---HRIYTHQSDVWSYGVT 202
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 94 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 152
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 63/253 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI-LKEIRFLRQLK-HPNTIEY 227
+G+GS G V + R VA+K+M + DI L EI+ L + HPN I Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRY 74
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
D ++ +E C + D++E + E N ++
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDE-----------------------NLKL 111
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN---------------------I 326
KE ++ + G+ +LHSL IHRD+K N I
Sbjct: 112 Q----KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 327 LLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGK----VDVWSLG- 381
L+++ G K D G +S + N+ GT W APE++ + Q + +D++S+G
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 382 ITCIELAERKPPY 394
+ L++ K P+
Sbjct: 228 VFYYILSKGKHPF 240
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRG 66
HPN I Y D ++ +E C + D++E + KE ++ + G
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 67 LNYLHSLGRIHRDVKAGN---------------------ILLTETGTVKLADFGSASIKC 105
+ +LHSL IHRD+K N IL+++ G K D G +S +
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 106 PANSFVGTPYWMAPEVILAMDEGQYDGK----VDVWSLG 140
N+ GT W APE++ + Q + +D++S+G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 616 LVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
+ +E C + D++E + KE ++ + G+ +LHSL IHRD+K N
Sbjct: 86 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 145
Query: 670 ILLTETGTVKLDTPDEQAG 688
IL++ + T D+Q G
Sbjct: 146 ILVSTSSRF---TADQQTG 161
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 73
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 74 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCL 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 210
Query: 384 CIEL 387
EL
Sbjct: 211 VWEL 214
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 152 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 201
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 202 SDVWSYGVT 210
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 94 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
Query: 674 ETGTVKL 680
VK+
Sbjct: 154 TPQHVKI 160
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 59/249 (23%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI-LKEIRFLRQLK-HPNTIEY 227
+G+GS G V + R VA+K+M + DI L EI+ L + HPN I Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRY 92
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
D ++ +E C + D++E + E N ++
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDE-----------------------NLKL 129
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN---------------------I 326
KE ++ + G+ +LHSL IHRD+K N I
Sbjct: 130 Q----KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 327 LLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCI 385
L+++ G K D G + N+ GT W APE++ + + +D++S+G +
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 386 ELAERKPPY 394
L++ K P+
Sbjct: 246 ILSKGKHPF 254
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRG 66
HPN I Y D ++ +E C + D++E + KE ++ + G
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 67 LNYLHSLGRIHRDVKAGNIL---------------------LTETGTVKLADFGSASIKC 105
+ +LHSL IHRD+K NIL +++ G K D G +
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 106 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
N+ GT W APE++ + + +D++S+G
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 616 LVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
+ +E C + D++E + KE ++ + G+ +LHSL IHRD+K N
Sbjct: 104 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 163
Query: 670 ILLTETGTVKLDTPDEQAG 688
IL++ + T D+Q G
Sbjct: 164 ILVSTSSRF---TADQQTG 179
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD+ A NIL+ E K+ADFG A + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 171 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 228 VERGYRMPC 236
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 64 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD+ A NIL+ E K+ADFG A + + A P W
Sbjct: 123 IASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 183 APEAALY---GRFTIKSDVWSFGI 203
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L+ ++ + + + G+ Y+ + +HRD+ A NIL+ E K+
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKV 155
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 73
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 74 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCL 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 210
Query: 384 CIEL 387
EL
Sbjct: 211 VWEL 214
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 152 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 201
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 202 SDVWSYGVT 210
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 94 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
Query: 674 ETGTVKL 680
VK+
Sbjct: 154 TPQHVKI 160
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 100
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + L +H N + G ++ EYC D++ +++ R+ V L+
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLL--NFLRRKSRV------LET 150
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
F + L ++ S V +G+ +L S IHRDV A N+LLT
Sbjct: 151 DPAFA---------IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 333 TVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
K+ DFG A I +N V WMAPE I + Y + DVWS GI E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWSYGILLWE 258
Query: 387 L 387
+
Sbjct: 259 I 259
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAIC---------- 60
+H N + G ++ EYC G + + R L+ + AI
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 61 ---SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-- 114
S V +G+ +L S IHRDV A N+LLT K+ DFG A I +N V
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 115 ---YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE I + Y + DVWS GI
Sbjct: 228 LPVKWMAPESIF---DCVYTVQSDVWSYGI 254
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 14/79 (17%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC-------------SGVLRGLNYLHSLGRI 661
++ EYC G + + R L+ + AI S V +G+ +L S I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 662 HRDVKAGNILLTETGTVKL 680
HRDV A N+LLT K+
Sbjct: 187 HRDVAARNVLLTNGHVAKI 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 98/257 (38%), Gaps = 64/257 (24%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 100
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + L +H N + G ++ EYC
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYC---------------------------- 132
Query: 273 LKCFTEHFALFNFEVHKRP----------------LKEEEIAAICSGVLRGLNYLHSLGR 316
C+ + L NF KRP L ++ S V +G+ +L S
Sbjct: 133 --CYGD---LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC 187
Query: 317 IHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQ 370
IHRDV A N+LLT K+ DFG A I +N V WMAPE I +
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCV 244
Query: 371 YDGKVDVWSLGITCIEL 387
Y + DVWS GI E+
Sbjct: 245 YTVQSDVWSYGILLWEI 261
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRP----------------LKEE 54
+H N + G ++ EYC G + + KRP L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 55 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGT 113
++ S V +G+ +L S IHRDV A N+LLT K+ DFG A I +N V
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 114 P-----YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE I + Y + DVWS GI
Sbjct: 227 NARLPVKWMAPESIF---DCVYTVQSDVWSYGI 256
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
L ++ S V +G+ +L S IHRDV A N+LLT K+
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 207
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 75
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 76 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCL 107
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 108 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 162
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 163 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 212
Query: 384 CIEL 387
EL
Sbjct: 213 VWEL 216
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 154 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 203
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 204 SDVWSYGVT 212
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 96 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 155
Query: 674 ETGTVKL 680
VK+
Sbjct: 156 TPQHVKI 162
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCP 347
L+ ++ + + + G+ Y+ + +HRD++A NIL+ E K+ADFG + +
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
Query: 348 ANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPYFNMNAMSALYH 405
A P W APE L G++ K DVWS GI EL + + PY M L
Sbjct: 338 ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 394
Query: 406 IAQN-DTPC 413
+ + PC
Sbjct: 395 VERGYRMPC 403
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSG 62
+ ++++L+H ++ + + ++V EY GS D ++ + L+ ++ + +
Sbjct: 231 AQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 289
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY-WM 117
+ G+ Y+ + +HRD++A NIL+ E K+ADFG + + A P W
Sbjct: 290 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT 349
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE L G++ K DVWS GI
Sbjct: 350 APEAALY---GRFTIKSDVWSFGI 370
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 616 LVMEY-CLGSASDIIEVHK-RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
+V EY GS D ++ + L+ ++ + + + G+ Y+ + +HRD++A NIL+
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 315
Query: 674 ETGTVKL 680
E K+
Sbjct: 316 ENLVCKV 322
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 59/249 (23%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI-LKEIRFLRQLK-HPNTIEY 227
+G+GS G V + R VA+K+M + DI L EI+ L + HPN I Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRY 92
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
D ++ +E C + D++E + E N ++
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDE-----------------------NLKL 129
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN---------------------I 326
KE ++ + G+ +LHSL IHRD+K N I
Sbjct: 130 Q----KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 327 LLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCI 385
L+++ G K D G + N+ GT W APE++ + + +D++S+G +
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 386 ELAERKPPY 394
L++ K P+
Sbjct: 246 ILSKGKHPF 254
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRG 66
HPN I Y D ++ +E C + D++E + KE ++ + G
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 67 LNYLHSLGRIHRDVKAGNIL---------------------LTETGTVKLADFGSASIKC 105
+ +LHSL IHRD+K NIL +++ G K D G +
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 106 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 140
N+ GT W APE++ + + +D++S+G
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 616 LVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
+ +E C + D++E + KE ++ + G+ +LHSL IHRD+K N
Sbjct: 104 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 163
Query: 670 ILLTETGTVKLDTPDEQAG 688
IL++ + T D+Q G
Sbjct: 164 ILVSTSSRF---TADQQTG 179
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 106
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 107 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 162 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 211
Query: 387 L 387
L
Sbjct: 212 L 212
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
+G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 185 ----WMALESIL---HRIYTHQSDVWSYGVT 208
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVL 64
S++ QL H N I+ + + LVMEY G D I L E + +
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197
Query: 65 RGLNYLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKCPANSF---VGTPYWMAP 119
G+ ++H + +H D+K NIL + +K+ DFG A P GTP ++AP
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257
Query: 120 EVILAMDEGQYD---GKVDVWSLGI 141
EV+ YD D+WS+G+
Sbjct: 258 EVV------NYDFVSFPTDMWSVGV 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 92/246 (37%), Gaps = 51/246 (20%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G FG V+ + +A K + G + E ++ EI + QL H N I+
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE---EVKNEISVMNQLDHANLIQLYD 153
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
+ + LVMEY G LF+ + +
Sbjct: 154 AFESKNDIVLVMEYVDGGE---------------------------------LFDRIIDE 180
Query: 290 R-PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKC 346
L E + + G+ ++H + +H D+K NIL + +K+ DFG A
Sbjct: 181 SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240
Query: 347 PANSF---VGTPYWMAPEVILAMDEGQYD---GKVDVWSLGITCIELAERKPPYFNMNAM 400
P GTP ++APEV+ YD D+WS+G+ L P+ N
Sbjct: 241 PREKLKVNFGTPEFLAPEVV------NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
Query: 401 SALYHI 406
L +I
Sbjct: 295 ETLNNI 300
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 76 DNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCLLDY 107
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 108 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 162
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 163 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 212
Query: 387 L 387
L
Sbjct: 213 L 213
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 91 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 151 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 200
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 201 SDVWSYGVT 209
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 93 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 152
Query: 674 ETGTVKL 680
VK+
Sbjct: 153 TPQHVKI 159
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 74
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 75 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCL 106
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 211
Query: 384 CIEL 387
EL
Sbjct: 212 VWEL 215
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 93 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 202
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 203 SDVWSYGVT 211
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 95 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 154
Query: 674 ETGTVKL 680
VK+
Sbjct: 155 TPQHVKI 161
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCLLDY 106
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 107 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 162 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 211
Query: 387 L 387
L
Sbjct: 212 L 212
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 90 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 199
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 200 SDVWSYGVT 208
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 92 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
Query: 674 ETGTVKL 680
VK+
Sbjct: 152 TPQHVKI 158
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 73
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 74 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------MQLMPFGCL 105
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 106 LDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 160
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 210
Query: 384 CIEL 387
EL
Sbjct: 211 VWEL 214
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 152 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 201
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 202 SDVWSYGVT 210
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 94 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
Query: 674 ETGTVKL 680
VK+
Sbjct: 154 TPQHVKI 160
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 92/255 (36%), Gaps = 54/255 (21%)
Query: 170 IGHGSFGAVYYARCLV---SREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
IG G FG V R VAIK + G + + L E + Q +HPN I
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLK--GGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFE 286
G ++ E+ A D L+ F +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSF--------------------LRLNDGQFTVI--- 116
Query: 287 VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG------ 340
++ + G+ G+ YL + +HRD+ A NIL+ K++DFG
Sbjct: 117 ---------QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 167
Query: 341 -SASIKCPANSFVGT--PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKPPY 394
++S +S G W APE I ++ D WS GI E ER PY
Sbjct: 168 ENSSDPTYTSSLGGKIPIRWTAPEAIAFR---KFTSASDAWSYGIVMWEVMSFGER--PY 222
Query: 395 FNMNAMSALYHIAQN 409
++M+ + I Q+
Sbjct: 223 WDMSNQDVINAIEQD 237
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASD-IIEVHKRPLKEEEIAAICSGV 63
+S++ Q +HPN I G ++ E+ A D + ++ ++ + G+
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 125
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-------SASIKCPANSFVGT--P 114
G+ YL + +HRD+ A NIL+ K++DFG ++S +S G
Sbjct: 126 ASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 115 YWMAPEVILAMDEGQYDGKVDVWSLGIT 142
W APE I ++ D WS GI
Sbjct: 186 RWTAPEAIAFR---KFTSASDAWSYGIV 210
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 640 EIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
++ + G+ G+ YL + +HRD+ A NIL+ K+
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV 157
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 348
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 349 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLGITCIELAERKPPY 394
S VGT +MAPEV + +G YD D +SLG +L P+
Sbjct: 348 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 107
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 108 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLG 140
S VGT +MAPEV + +G YD D +SLG
Sbjct: 348 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLG 377
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E ++ + ++ GL ++H+ ++RD+K NILL E G V++
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 332
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 348
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 349 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLGITCIELAERKPPY 394
S VGT +MAPEV + +G YD D +SLG +L P+
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 107
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLG 140
S VGT +MAPEV + +G YD D +SLG
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLG 378
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E ++ + ++ GL ++H+ ++RD+K NILL E G V++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 92/244 (37%), Gaps = 62/244 (25%)
Query: 161 EKIFEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFL 216
E F+ ++ +G G+FG VY + E V AIK++ A K +IL E +
Sbjct: 11 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVM 68
Query: 217 RQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCF 276
+ +P+ G CL S +I +L C
Sbjct: 69 ASVDNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCL 100
Query: 277 TEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 336
++ HK + + + C + G+NYL +HRD+ A N+L+ VK+
Sbjct: 101 LDYV-----REHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 155
Query: 337 ADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 383
DFG A + K P WMA E IL Y + DVWS G+T
Sbjct: 156 TDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVT 205
Query: 384 CIEL 387
EL
Sbjct: 206 VWEL 209
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVL 64
+ ++ + +P+ G L + G D + HK + + + C +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 124
Query: 65 RGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFV 111
G+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 181
Query: 112 GTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 182 ----WMALESIL---HRIYTHQSDVWSYGVT 205
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + G+NYL +HRD+ A N+L+ VK+
Sbjct: 97 FGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 155
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCL-VSREIVAIKKMSYLGKQCA---EKWADILKEI 213
E P + + +G G+FG V A + +E +K + K A EK A ++ E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSEL 100
Query: 214 RFLRQL-KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQ 272
+ + L +H N + G ++ EYC D++ +++ R+ V
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLL--NFLRRKSRVLET------ 150
Query: 273 LKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETG 332
FA+ N R ++ S V +G+ +L S IHRDV A N+LLT
Sbjct: 151 ----DPAFAIANSTASTR-----DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 333 TVKLADFGSA-SIKCPANSFVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
K+ DFG A I +N V WMAPE I + Y + DVWS GI E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWSYGILLWE 258
Query: 387 L 387
+
Sbjct: 259 I 259
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 12 KHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAIC---------- 60
+H N + G ++ EYC G + + R L+ + AI
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 61 ---SGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA-SIKCPANSFVGTP-- 114
S V +G+ +L S IHRDV A N+LLT K+ DFG A I +N V
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 115 ---YWMAPEVILAMDEGQYDGKVDVWSLGI 141
WMAPE I + Y + DVWS GI
Sbjct: 228 LPVKWMAPESIF---DCVYTVQSDVWSYGI 254
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 14/79 (17%)
Query: 616 LVMEYC-LGSASDIIEVHKRPLKEEEIAAIC-------------SGVLRGLNYLHSLGRI 661
++ EYC G + + R L+ + AI S V +G+ +L S I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 662 HRDVKAGNILLTETGTVKL 680
HRDV A N+LLT K+
Sbjct: 187 HRDVAARNVLLTNGHVAKI 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDII---EVHKRPLKEEEIAAI 59
A +++++ L+H ++ ++ + GS D + E K+PL + +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK--LIDF 116
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI----KCPANSFVGTPY 115
+ + G+ ++ IHRD++A NIL++ + K+ADFG A + + A P
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 116 -WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 177 KWTAPE---AINFGSFTIKSDVWSFGI 200
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 45/235 (19%)
Query: 158 EDPEKIFEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLR 217
E P + + +++G G FG V+ A VA+K M G E + L E ++
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMK-PGSMSVEAF---LAEANVMK 65
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
L+H ++ ++ + GS D ++ EG L +L F+
Sbjct: 66 TLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFS 117
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
A G+ ++ IHRD++A NIL++ + K+A
Sbjct: 118 AQIA------------------------EGMAFIEQRNYIHRDLRAANILVSASLVCKIA 153
Query: 338 DFGSASI----KCPANSFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
DFG A + + A P W APE A++ G + K DVWS GI +E+
Sbjct: 154 DFGLARVIEDNEYTAREGAKFPIKWTAPE---AINFGSFTIKSDVWSFGILLMEI 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 348
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 349 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLGITCIELAERKPPY 394
S VGT +MAPEV + +G YD D +SLG +L P+
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 107
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLG 140
S VGT +MAPEV + +G YD D +SLG
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLG 378
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E ++ + ++ GL ++H+ ++RD+K NILL E G V++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 292 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 348
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 349 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLGITCIELAERKPPY 394
S VGT +MAPEV + +G YD D +SLG +L P+
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA---SIKCPA 107
E ++ + ++ GL ++H+ ++RD+K NILL E G V+++D G A S K P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 NSFVGTPYWMAPEVILAMDEG-QYDGKVDVWSLG 140
S VGT +MAPEV + +G YD D +SLG
Sbjct: 349 AS-VGTHGYMAPEV---LQKGVAYDSSADWFSLG 378
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
E ++ + ++ GL ++H+ ++RD+K NILL E G V++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGV 63
+ +++ L HP+ ++ G + + W++ME Y G +E +K LK + +
Sbjct: 60 AVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 118
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-----WMA 118
+ + YL S+ +HRD+ NIL+ VKL DFG + + + + WM+
Sbjct: 119 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 119 PEVILAMDEGQYDGKVDVWSLGI 141
PE +++ ++ DVW +
Sbjct: 179 PE---SINFRRFTTASDVWMFAV 198
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 51/239 (21%)
Query: 168 REIGHGSFGAVY---YARCLVSREIVAIKKMSYLGKQCA-EKWADILKEIRFLRQLKHPN 223
R +G G FG VY Y + VA+K K C + + E ++ L HP+
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDHPH 70
Query: 224 TIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
++ G + + W++ME Y G H++ER
Sbjct: 71 IVKLIGI-IEEEPTWIIMELYPYGELG-----HYLER----------------------- 101
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+K LK + + + + YL S+ +HRD+ NIL+ VKL DFG +
Sbjct: 102 -----NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
Query: 343 SIKCPANSFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYF 395
+ + + WM+PE +++ ++ DVW + E L+ K P+F
Sbjct: 157 RYIEDEDYYKASVTRLPIKWMSPE---SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME Y G +E +K LK + + + + YL S+ +HRD+ NIL+
Sbjct: 85 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 144
Query: 675 TGTVKL 680
VKL
Sbjct: 145 PECVKL 150
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HP+ ++ G + + W++ME Y G +E +K LK + + +
Sbjct: 78 IMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 136
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-----WMAPE 120
+ YL S+ +HRD+ NIL+ VKL DFG + + + + WM+PE
Sbjct: 137 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
+++ ++ DVW +
Sbjct: 197 ---SINFRRFTTASDVWMFAV 214
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 51/239 (21%)
Query: 168 REIGHGSFGAVY---YARCLVSREIVAIKKMSYLGKQCA-EKWADILKEIRFLRQLKHPN 223
R +G G FG VY Y + VA+K K C + + E ++ L HP+
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDHPH 86
Query: 224 TIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
++ G + + W++ME Y G H++ER
Sbjct: 87 IVKLIGI-IEEEPTWIIMELYPYGELG-----HYLER----------------------- 117
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+K LK + + + + YL S+ +HRD+ NIL+ VKL DFG +
Sbjct: 118 -----NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
Query: 343 SIKCPANSFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYF 395
+ + + WM+PE +++ ++ DVW + E L+ K P+F
Sbjct: 173 RYIEDEDYYKASVTRLPIKWMSPE---SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME Y G +E +K LK + + + + YL S+ +HRD+ NIL+
Sbjct: 101 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 160
Query: 675 TGTVKL 680
VKL
Sbjct: 161 PECVKL 166
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLR 65
+++ L HP+ ++ G + + W++ME Y G +E +K LK + + +
Sbjct: 66 IMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 124
Query: 66 GLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTPY-----WMAPE 120
+ YL S+ +HRD+ NIL+ VKL DFG + + + + WM+PE
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
+++ ++ DVW +
Sbjct: 185 ---SINFRRFTTASDVWMFAV 202
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 51/239 (21%)
Query: 168 REIGHGSFGAVY---YARCLVSREIVAIKKMSYLGKQCA-EKWADILKEIRFLRQLKHPN 223
R +G G FG VY Y + VA+K K C + + E ++ L HP+
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDHPH 74
Query: 224 TIEYRGCYLRDHTAWLVME-YCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
++ G + + W++ME Y G H++ER
Sbjct: 75 IVKLIGI-IEEEPTWIIMELYPYGELG-----HYLER----------------------- 105
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSA 342
+K LK + + + + YL S+ +HRD+ NIL+ VKL DFG +
Sbjct: 106 -----NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
Query: 343 SIKCPANSFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPYF 395
+ + + WM+PE +++ ++ DVW + E L+ K P+F
Sbjct: 161 RYIEDEDYYKASVTRLPIKWMSPE---SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 616 LVME-YCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTE 674
++ME Y G +E +K LK + + + + YL S+ +HRD+ NIL+
Sbjct: 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 148
Query: 675 TGTVKL 680
VKL
Sbjct: 149 PECVKL 154
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 51/258 (19%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
E+G G+FG V+ + A K + + E + KEI+ + L+HP +
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVLRHPTLVNLH 114
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
+ D+ +VM Y S ++ E K EH
Sbjct: 115 DAFEDDNE--MVMIYEFMSGGELFE--------------------KVADEH--------- 143
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKC 346
+ E+E V +GL ++H +H D+K NI+ T + +KL DFG +
Sbjct: 144 -NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 347 PANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
P S GT + APEV G Y D+WS+G+ L P+ N L
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 404 YHIAQNDTPCLQSSDWSV 421
++ +S DW++
Sbjct: 260 RNV--------KSCDWNM 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 11 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HP + + D+ ++ E+ G + + H + + E+E V +GL
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLC 163
Query: 69 YLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVIL 123
++H +H D+K NI+ T + +KL DFG + P S GT + APEV
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 223
Query: 124 AMDEGQYDGKVDVWSLGI 141
G Y D+WS+G+
Sbjct: 224 GKPVGYY---TDMWSVGV 238
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 615 QLVMEYCLGSASDIIEV---HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
++VM Y S ++ E + E+E V +GL ++H +H D+K NI+
Sbjct: 122 EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIM 181
Query: 672 LT 673
T
Sbjct: 182 FT 183
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 3 AGSSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDII---EVHKRPLKEEEIAAI 59
A +++++ L+H ++ ++ + GS D + E K+PL + +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK--LIDF 289
Query: 60 CSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV---GTPY- 115
+ + G+ ++ IHRD++A NIL++ + K+ADFG A + N + G +
Sbjct: 290 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFP 348
Query: 116 --WMAPEVILAMDEGQYDGKVDVWSLGI 141
W APE A++ G + K DVWS GI
Sbjct: 349 IKWTAPE---AINFGSFTIKSDVWSFGI 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 276 FTEHFALFNF----EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 331
F +L +F E K+PL + + + + G+ ++ IHRD++A NIL++ +
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPK--LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 320
Query: 332 GTVKLADFGSASIKCPANSFV---GTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCI 385
K+ADFG A + N + G + W APE A++ G + K DVWS GI +
Sbjct: 321 LVCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPE---AINFGSFTIKSDVWSFGILLM 376
Query: 386 ELAER-KPPYFNMN 398
E+ + PY M+
Sbjct: 377 EIVTYGRIPYPGMS 390
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 103/293 (35%), Gaps = 68/293 (23%)
Query: 104 KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITPGSLKDPEIAELFDKEDPEKI 163
K P + F P PEV L G LK + EL D
Sbjct: 3 KKPQDHFFDVPAEEDPEVHL--------------------GQLKRFSLRELQVASDN--- 39
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPN 223
F + +G G FG VY R L +VA+K++ Q E E+ + H N
Sbjct: 40 FSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGE--LQFQTEVEMISMAVHRN 96
Query: 224 TIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
+ RG + LV Y GS + C E
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVA------------------------SCLRER--- 129
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSL---GRIHRDVKAGNILLTETGTVKLADF 339
+ PL + I G RGL YLH IHRDVKA NILL E + DF
Sbjct: 130 ---PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 186
Query: 340 GSASIKCPANSFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
G A + + V GT +APE + G+ K DV+ G+ +EL
Sbjct: 187 GLAKLMDYKDXHVXXAVRGTIGHIAPEY---LSTGKSSEKTDVFGYGVMLLEL 236
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 60/141 (42%), Gaps = 15/141 (10%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVH---KRPLKEEEIAAICSGVLRGLN 68
H N + RG + LV Y GS + + + PL + I G RGL
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 69 YLHSL---GRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFV-----GTPYWMAPE 120
YLH IHRDVKA NILL E + DFG A + + V GT +APE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 121 VILAMDEGQYDGKVDVWSLGI 141
+ G+ K DV+ G+
Sbjct: 214 Y---LSTGKSSEKTDVFGYGV 231
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 635 PLKEEEIAAICSGVLRGLNYLHSL---GRIHRDVKAGNILLTE 674
PL + I G RGL YLH IHRDVKA NILL E
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 177
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 243
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 238
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 234
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 229
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 234
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 229
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 49/240 (20%)
Query: 168 REIGHGSFGAVYYARCLVSREIVAIKKMSYLG-----KQCAEKWADILKEIRFLRQLKHP 222
++IG G FG V+ R + + +VAIK + LG + EK+ + +E+ + L HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSL-ILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 223 NTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFAL 282
N ++ G L + +VME+ + C + L
Sbjct: 84 NIVKLYG--LMHNPPRMVMEF-----------------------------VPCGDLYHRL 112
Query: 283 FNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGR--IHRDVKAGNILLT---ETGTV--K 335
+ P+K + + G+ Y+ + +HRD+++ NI L E V K
Sbjct: 113 LD---KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 336 LADFGSASIKCPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPY 394
+ADF + + S +G WMAPE I A +E Y K D +S + + + P+
Sbjct: 170 VADFSLSQQSVHSVSGLLGNFQWMAPETIGA-EEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLR 65
++ L HPN ++ G L + +VME+ G + P+K + +
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 66 GLNYLHSLGR--IHRDVKAGNILLT---ETGTV--KLADFGSASIKCPANS-FVGTPYWM 117
G+ Y+ + +HRD+++ NI L E V K+ADF + + S +G WM
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWM 193
Query: 118 APEVILAMDEGQYDGKVDVWSLGI 141
APE I A +E Y K D +S +
Sbjct: 194 APETIGA-EEESYTEKADTYSFAM 216
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 243
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 238
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 243
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 238
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 132/363 (36%), Gaps = 61/363 (16%)
Query: 169 EIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYR 228
E+G G+FG V+ + A K + + E + KEI+ + L+HP +
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVLRHPTLVNLH 220
Query: 229 GCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVH 288
+ D+ +VM Y S ++ E K EH
Sbjct: 221 DAFEDDNE--MVMIYEFMSGGELFE--------------------KVADEH--------- 249
Query: 289 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKC 346
+ E+E V +GL ++H +H D+K NI+ T + +KL DFG +
Sbjct: 250 -NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 347 PANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSAL 403
P S GT + APEV G Y D+WS+G+ L P+ N L
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 404 YHIAQNDTPCLQSSDWSVIKTISSTAE---RK----PPYFNMNAMSALYH--IAQNDTPC 454
+N C + D S IS + RK P M AL H + + P
Sbjct: 366 ----RNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421
Query: 455 LQSSDWSDTFAHFVSSCLAKN---PADRPSSGRLLTHDLVT--RPRSPSVLVDLIRRTKA 509
S S + S K P P GR+ + + RP+ S+ R++A
Sbjct: 422 RDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEA 481
Query: 510 AVR 512
R
Sbjct: 482 QPR 484
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 11 LKHPNTIEYRGCYLRDHTAWLVMEYCLGSA--SDIIEVHKRPLKEEEIAAICSGVLRGLN 68
L+HP + + D+ ++ E+ G + + H + + E+E V +GL
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLC 269
Query: 69 YLHSLGRIHRDVKAGNILLT--ETGTVKLADFGSASIKCPANSF---VGTPYWMAPEVIL 123
++H +H D+K NI+ T + +KL DFG + P S GT + APEV
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 124 AMDEGQYDGKVDVWSLGI 141
G Y D+WS+G+
Sbjct: 330 GKPVGYY---TDMWSVGV 344
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 615 QLVMEYCLGSASDIIEV----HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNI 670
++VM Y S ++ E H + + E+E V +GL ++H +H D+K NI
Sbjct: 228 EMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 286
Query: 671 LLT 673
+ T
Sbjct: 287 MFT 289
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 101/267 (37%), Gaps = 66/267 (24%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIV----AIK 193
++GI G + + + + + F+ ++ + G+FG VY + E V AIK
Sbjct: 2 AMGIRSGEAPNQALLRILKETE----FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIK 57
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
++ A K +IL E + + +P+ G CL S +I
Sbjct: 58 ELREATSPKANK--EILDEAYVMASVDNPHVCRLLGI-------------CLTSTVQLI- 101
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+L C ++ HK + + + C + +G+NYL
Sbjct: 102 --------------TQLMPFGCLLDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAP 360
+HRD+ A N+L+ VK+ DFG A + K P WMA
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMAL 195
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E IL Y + DVWS G+T EL
Sbjct: 196 ESIL---HRIYTHQSDVWSYGVTVWEL 219
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 191
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 192 --WMALESIL---HRIYTHQSDVWSYGVT 215
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 107 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 165
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 234
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 229
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 189 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 249 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 189 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 249 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 288
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 189 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 239
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 234
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 229
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 245
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 240
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 191
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 243
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 238
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 191 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 251 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 191 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 251 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 290
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 191 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 283
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 149/414 (35%), Gaps = 81/414 (19%)
Query: 128 GQYDG-KV--------DVWSLGI-TPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGA 177
G+YDG K+ D+W + P +K + + +D L E+G G+FG
Sbjct: 16 GKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDI---------LEELGSGAFGV 66
Query: 178 VYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTA 237
V+ RC V + + ++ + EI + QL HP I + +
Sbjct: 67 VH--RC-VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM 123
Query: 238 WLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEI 297
L++E+ G E F E +K + E E+
Sbjct: 124 VLILEFLSGG------------------------------ELFDRIAAEDYK--MSEAEV 151
Query: 298 AAICSGVLRGLNYLHSLGRIHRDVKAGNIL--LTETGTVKLADFGSASIKCP---ANSFV 352
GL ++H +H D+K NI+ + +VK+ DFG A+ P
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 353 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNDTP 412
T + APE++ G Y D+W++G+ L P+ + + L QN
Sbjct: 212 ATAEFAAPEIVDREPVGFY---TDMWAIGVLGYVLLSGLSPFAGEDDLETL----QNVKR 264
Query: 413 CLQSSDWSVIKTISSTAE-------RKPPYFNMNAMSALYHI-----AQNDTPCLQSSDW 460
C D ++S A+ +K P + AL H N T + SS +
Sbjct: 265 CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRY 324
Query: 461 SDTFAHFVSSCLAKNPADRPSSGRLLTHDLVT--RPRSPSVLVDLIRRTKAAVR 512
+ + A PA +P+ GR+ + RP+ + R +A R
Sbjct: 325 -NKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSYFDRKEAVPR 377
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 6 SLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSA-SDIIEVHKRPLKEEEIAAICSGVL 64
S++ QL HP I + + L++E+ G D I + E E+
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC 159
Query: 65 RGLNYLHSLGRIHRDVKAGNIL--LTETGTVKLADFGSASIKCP---ANSFVGTPYWMAP 119
GL ++H +H D+K NI+ + +VK+ DFG A+ P T + AP
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 219
Query: 120 EVILAMDEGQYDGKVDVWSLGI 141
E++ G Y D+W++G+
Sbjct: 220 EIVDREPVGFY---TDMWAIGV 238
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 6 SLLR-QLKHPNTIEYRGCYLRDHTAWLVMEYC-----------------LGSASDIIEVH 47
++LR +L+HPN + G +D ++ YC +GS D V
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV- 138
Query: 48 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-------S 100
K L+ + + + + G+ YL S +H+D+ N+L+ + VK++D G +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 101 ASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
K NS + WMAPE I+ G++ D+WS G+
Sbjct: 199 DYYKLLGNSLLPI-RWMAPEAIMY---GKFSIDSDIWSYGVV 236
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 43/237 (18%)
Query: 167 LREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIR---FLR- 217
+ E+G FG VY + VAIK + K AE + +E R LR
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL----KDKAE--GPLREEFRHEAMLRA 84
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+L+HPN + G +D ++ YC S D+ E + G + + +K
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYC--SHGDLHEFLVMRSPHSDVGSTDDDRTVKS-- 140
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
L+ + + + + G+ YL S +H+D+ N+L+ + VK++
Sbjct: 141 -------------ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 187
Query: 338 DFG-------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D G + K NS + WMAPE I+ G++ D+WS G+ E+
Sbjct: 188 DLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMY---GKFSIDSDIWSYGVVLWEV 240
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 275
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 343
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 344 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
K P G WMAPE I + Y + DVWS G+ E+
Sbjct: 242 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEI 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 45 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSAS-- 102
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+ DFG A
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 103 IKCPANSFVGTPY----WMAPEVILAMDEGQYDGKVDVWSLGI 141
K P G WMAPE I + Y + DVWS G+
Sbjct: 242 YKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGV 281
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 630 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
+++K L E + V +G+ +L S IHRD+ A NILL+E VK+
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 232
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 58/239 (24%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWA--DILKEIRFLRQLKH 221
F+ ++ +G G+FG VY + E V I ++ A +IL E + + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 222 PNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFA 281
P+ G CL S +I +L C ++
Sbjct: 111 PHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDYV- 141
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGS 341
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DFG
Sbjct: 142 ----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL 197
Query: 342 ASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
A + K P WMA E IL Y + DVWS G+T EL
Sbjct: 198 AKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWEL 246
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 164 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 218
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 219 --WMALESIL---HRIYTHQSDVWSYGVT 242
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 134 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 192
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ + G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I +L C ++
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI---------------TQLMPFGCLLDY 106
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
HK + + + C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 107 V-----REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 162 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 211
Query: 387 L 387
L
Sbjct: 212 L 212
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 185 --WMALESIL---HRIYTHQSDVWSYGVT 208
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 22 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 75
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 76 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 120
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----- 340
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 341 --SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+A + + WMAPE ++ +G + D+WS G+ E+
Sbjct: 181 YETAYYRKGGKGLLPV-RWMAPE---SLKDGVFTTSSDMWSFGVVLWEIT 226
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-------SAS 102
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG +A
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 103 IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ + WMAPE ++ +G + D+WS G+
Sbjct: 186 YRKGGKGLLPV-RWMAPE---SLKDGVFTTSSDMWSFGVV 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 62/241 (25%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G L ++ G D + RE H + +G++
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV------RE-HKDNIGSQY--------- 119
Query: 280 FALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADF 339
L N+ C + +G+NYL +HRD+ A N+L+ VK+ DF
Sbjct: 120 --LLNW---------------CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 162
Query: 340 GSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 386
G A + K P WMA E IL Y + DVWS G+T E
Sbjct: 163 GLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVWE 212
Query: 387 L 387
L
Sbjct: 213 L 213
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 91 TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 151 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 200
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 201 SDVWSYGVT 209
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 93 QLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 152
Query: 674 ETGTVKL 680
VK+
Sbjct: 153 TPQHVKI 159
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRG 229
+G G FG+VY + VAIK ++ K W ++ R ++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIK---HVEKDRISDWGELPNGTRVPMEVV--------- 63
Query: 230 CYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHK 289
L+ + G + I + W ER + R++ ++ LF+F +
Sbjct: 64 ---------LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQ------DLFDFITER 108
Query: 290 RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KC 346
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 109 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 347 PANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 214
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 171 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 202
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 156
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 164 FEDLREI-----GHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQ 218
FED+ ++ G G++ V A L + + A+K + KQ + + +E+ L Q
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE---KQAGHSRSRVFREVETLYQ 66
Query: 219 LK-HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+ + N +E + D +LV E G + I H I+++ H
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAH-IQKQKH--------------- 107
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL---TETGTV 334
FN E E + + V L++LH+ G HRD+K NIL + V
Sbjct: 108 -----FN---------EREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPV 153
Query: 335 KLADFGSASIKCPANSFV-----------GTPYWMAPEVILAMDEGQ--YDGKVDVWSLG 381
K+ DF S NS G+ +MAPEV+ + YD + D+WSLG
Sbjct: 154 KICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLG 213
Query: 382 ITCIELAERKPPY 394
+ + PP+
Sbjct: 214 VVLYIMLSGYPPF 226
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 23 YLRDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRIHRDVK 81
+ D T + ++ L S + + K+ E E + + V L++LH+ G HRD+K
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 82 AGNILL---TETGTVKLADFGSASIKCPANSFV-----------GTPYWMAPEVILAMDE 127
NIL + VK+ DF S NS G+ +MAPEV+ +
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 128 GQ--YDGKVDVWSLGIT 142
YD + D+WSLG+
Sbjct: 199 QATFYDKRCDLWSLGVV 215
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 633 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 671
++ E E + + V L++LH+ G HRD+K NIL
Sbjct: 105 QKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENIL 143
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 6 SLLR-QLKHPNTIEYRGCYLRDHTAWLVMEYC-----------------LGSASDIIEVH 47
++LR +L+HPN + G +D ++ YC +GS D V
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV- 121
Query: 48 KRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG-------S 100
K L+ + + + + G+ YL S +H+D+ N+L+ + VK++D G +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 101 ASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
K NS + WMAPE I+ G++ D+WS G+
Sbjct: 182 DYYKLLGNSLLPI-RWMAPEAIMY---GKFSIDSDIWSYGVV 219
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 43/237 (18%)
Query: 167 LREIGHGSFGAVYYARCL-----VSREIVAIKKMSYLGKQCAEKWADILKEIR---FLR- 217
+ E+G FG VY + VAIK + K AE + +E R LR
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL----KDKAE--GPLREEFRHEAMLRA 67
Query: 218 QLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFT 277
+L+HPN + G +D ++ YC S D+ E + G + + +K
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYC--SHGDLHEFLVMRSPHSDVGSTDDDRTVKS-- 123
Query: 278 EHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLA 337
L+ + + + + G+ YL S +H+D+ N+L+ + VK++
Sbjct: 124 -------------ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170
Query: 338 DFG-------SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
D G + K NS + WMAPE I+ G++ D+WS G+ E+
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMY---GKFSIDSDIWSYGVVLWEV 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 93/242 (38%), Gaps = 64/242 (26%)
Query: 164 FEDLREIGHGSFGAVYYARCLVSREIV----AIKKMSYLGKQCAEKWADILKEIRFLRQL 219
F+ ++ +G G+FG VY + E V AIK++ A K +IL E + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 220 KHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEH 279
+P+ G CL S +I QL F
Sbjct: 75 DNPHVCRLLGI-------------CLTSTVQLI------------------TQLMPFG-- 101
Query: 280 FALFNF-EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLAD 338
L ++ HK + + + C + +G+NYL +HRD+ A N+L+ VK+ D
Sbjct: 102 -XLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 339 FGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 385
FG A + K P WMA E IL Y + DVWS G+T
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQSDVWSYGVTVW 210
Query: 386 EL 387
EL
Sbjct: 211 EL 212
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 7 LLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRG 66
++ + +P+ G L + G D + HK + + + C + +G
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 67 LNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGT 113
+NYL +HRD+ A N+L+ VK+ DFG A + K P
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 184
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
WMA E IL Y + DVWS G+T
Sbjct: 185 --WMALESIL---HRIYTHQSDVWSYGVT 208
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 622 LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKL 680
G D + HK + + + C + +G+NYL +HRD+ A N+L+ VK+
Sbjct: 100 FGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 54/255 (21%)
Query: 170 IGHGSFGAVYYARCLV--SREI-VAIK--KMSYLGKQCAEKWADILKEIRFLRQLKHPNT 224
IG G FG V + REI VAIK K Y KQ D L E + Q HPN
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR----DFLSEASIMGQFDHPNV 70
Query: 225 IEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFN 284
I G + ++ E+ + D L+ F +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSF--------------------LRQNDGQFTVI- 109
Query: 285 FEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI 344
++ + G+ G+ YL + +HR + A NIL+ K++DFG +
Sbjct: 110 -----------QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRF 158
Query: 345 ------KCPANSFVGTPY---WMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPY 394
S +G W APE A+ ++ DVWS GI E ++ + PY
Sbjct: 159 LEDDTSDPTYTSALGGKIPIRWTAPE---AIQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
Query: 395 FNMNAMSALYHIAQN 409
++M + I Q+
Sbjct: 216 WDMTNQDVINAIEQD 230
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCL-GSASDIIEVHKRPLKEEEIAAICSGV 63
+S++ Q HPN I G + ++ E+ GS + + ++ + G+
Sbjct: 59 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 118
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASI------KCPANSFVGTPY-- 115
G+ YL + +HR + A NIL+ K++DFG + S +G
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 116 -WMAPEVILAMDEGQYDGKVDVWSLGIT 142
W APE A+ ++ DVWS GI
Sbjct: 179 RWTAPE---AIQYRKFTSASDVWSYGIV 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 22 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 75
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 76 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 120
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 346 CPANSF------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 388
+ + + WMAPE ++ +G + D+WS G+ E+
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVVLWEIT 226
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS 109
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 110 F------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ + WMAPE ++ +G + D+WS G+
Sbjct: 186 YRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVV 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 101/267 (37%), Gaps = 66/267 (24%)
Query: 138 SLGITPGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYARCLVSREIV----AIK 193
++GI G + + + + + F+ ++ + G+FG VY + E V AIK
Sbjct: 2 AMGIRSGEAPNQALLRILKETE----FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIK 57
Query: 194 KMSYLGKQCAEKWADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE 253
++ A K +IL E + + +P+ G CL S +I
Sbjct: 58 ELREATSPKANK--EILDEAYVMASVDNPHVCRLLGI-------------CLTSTVQLI- 101
Query: 254 VHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHS 313
+L C ++ HK + + + C + +G+NYL
Sbjct: 102 --------------MQLMPFGCLLDYV-----REHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 314 LGRIHRDVKAGNILLTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAP 360
+HRD+ A N+L+ VK+ DFG A + K P WMA
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMAL 195
Query: 361 EVILAMDEGQYDGKVDVWSLGITCIEL 387
E IL Y + DVWS G+T EL
Sbjct: 196 ESIL---HRIYTHQSDVWSYGVTVWEL 219
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 28 TAWLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNIL 86
T L+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L
Sbjct: 97 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 87 LTETGTVKLADFGSASI-------------KCPANSFVGTPYWMAPEVILAMDEGQYDGK 133
+ VK+ DFG A + K P WMA E IL Y +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-------WMALESIL---HRIYTHQ 206
Query: 134 VDVWSLGIT 142
DVWS G+T
Sbjct: 207 SDVWSYGVT 215
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 615 QLVMEYC-LGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLT 673
QL+M+ G D + HK + + + C + +G+NYL +HRD+ A N+L+
Sbjct: 99 QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 158
Query: 674 ETGTVKL 680
VK+
Sbjct: 159 TPQHVKI 165
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF++ K PL E V+ + + HS G +HRD+K NIL+ G KL DFG
Sbjct: 126 LFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPY-FN 396
S ++ P F GT + PE I QY VWSLGI ++ P+ +
Sbjct: 186 SGALLHDEPYTDFDGTRVYSPPEWI---SRHQYHALPATVWSLGILLYDMVCGDIPFERD 242
Query: 397 MNAMSALYHIAQNDTP 412
+ A H + +P
Sbjct: 243 QEILEAELHFPAHVSP 258
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYL 70
HP I + LV+E L A D+ + K PL E V+ + +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPL-PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 71 HSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPANSFVGTPYWMAPEVILAMDE 127
HS G +HRD+K NIL+ G KL DFGS ++ P F GT + PE I
Sbjct: 156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI---SR 212
Query: 128 GQYDG-KVDVWSLGI 141
QY VWSLGI
Sbjct: 213 HQYHALPATVWSLGI 227
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 616 LVMEYCLGSASDIIE--VHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL- 672
LV+E L A D+ + K PL E V+ + + HS G +HRD+K NIL+
Sbjct: 115 LVLERPL-PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID 173
Query: 673 TETGTVKL 680
G KL
Sbjct: 174 LRRGCAKL 181
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 31 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 90
+ ME G + + + L E+ L GL YLHS +H DVKA N+LL+
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 91 GT-VKLADFGSASIKCP---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 138
G+ L DFG A P + GT MAPEV+L D KVDVWS
Sbjct: 222 GSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS---CDAKVDVWS 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 304 VLRGLNYLHSLGRIHRDVKAGNILLTETGT-VKLADFGSASIKCP---------ANSFVG 353
L GL YLHS +H DVKA N+LL+ G+ L DFG A P + G
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 354 TPYWMAPEVILAMDEGQYDGKVDVWS 379
T MAPEV+L D KVDVWS
Sbjct: 254 TETHMAPEVVLGRS---CDAKVDVWS 276
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+ ME G + + + L E+ L GL YLHS +H DVKA N+LL+
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 676 GT 677
G+
Sbjct: 222 GS 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 31 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 90
+ ME G + + + L E+ L GL YLHS +H DVKA N+LL+
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 91 GT-VKLADFGSASIKCP---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 138
G+ L DFG A P + GT MAPEV+L D KVDVWS
Sbjct: 203 GSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS---CDAKVDVWS 257
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 304 VLRGLNYLHSLGRIHRDVKAGNILLTETGT-VKLADFGSASIKCP---------ANSFVG 353
L GL YLHS +H DVKA N+LL+ G+ L DFG A P + G
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 354 TPYWMAPEVILAMDEGQYDGKVDVWS 379
T MAPEV+L D KVDVWS
Sbjct: 235 TETHMAPEVVLGRS---CDAKVDVWS 257
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 616 LVMEYCLGSASDIIEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTET 675
+ ME G + + + L E+ L GL YLHS +H DVKA N+LL+
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 676 GT 677
G+
Sbjct: 203 GS 204
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 19 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 72
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 73 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 117
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----- 340
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 118 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 341 -SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKPPYFN 396
+ WMAPE ++ +G + D+WS G+ E LAE+ PY
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQG 232
Query: 397 MNAMSALYHI 406
++ L +
Sbjct: 233 LSNEQVLKFV 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG------SASI 103
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 182
Query: 104 KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ WMAPE ++ +G + D+WS G+
Sbjct: 183 XRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVV 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 22 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 75
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 76 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 120
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----- 340
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 341 -SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKPPY 394
+ WMAPE ++ +G + D+WS G+ E LAE+ PY
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PY 233
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG------SASI 103
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 104 KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ WMAPE ++ +G + D+WS G+
Sbjct: 186 XRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVV 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 22 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 75
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 76 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 120
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG----- 340
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 341 -SASIKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKPPYFN 396
+ WMAPE ++ +G + D+WS G+ E LAE+ PY
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQG 235
Query: 397 MNAMSALYHI 406
++ L +
Sbjct: 236 LSNEQVLKFV 245
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFG------SASI 103
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 104 KCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ WMAPE ++ +G + D+WS G+
Sbjct: 186 XRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVV 221
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 157 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 167 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 198
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKL 152
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 100 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 159
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 160 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 213
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 169
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 170 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 201
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 155
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 29/124 (23%)
Query: 266 MGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 325
+G ++Q+ C E AL+ L GL YLH+ +H DVKA N
Sbjct: 153 LGQLIKQMGCLPEDRALYYL----------------GQALEGLEYLHTRRILHGDVKADN 196
Query: 326 ILLTETGT-VKLADFGSASIKCP---------ANSFVGTPYWMAPEVILAMDEGQYDGKV 375
+LL+ G+ L DFG A P + GT MAPEV++ D KV
Sbjct: 197 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP---CDAKV 253
Query: 376 DVWS 379
D+WS
Sbjct: 254 DIWS 257
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGT-VKLADFGSASIKCP---------ANSFVGT 113
L GL YLH+ +H DVKA N+LL+ G+ L DFG A P + GT
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 235
Query: 114 PYWMAPEVILAMDEGQYDGKVDVWS 138
MAPEV++ D KVD+WS
Sbjct: 236 ETHMAPEVVMGKP---CDAKVDIWS 257
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 649 LRGLNYLHSLGRIHRDVKAGNILLTETGT 677
L GL YLH+ +H DVKA N+LL+ G+
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLSSDGS 204
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 167 LREIGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADILKEIRFLRQLKHPNTIE 226
LRE+G GSFG VY +R+I+ + + + + + A + + I FL + + ++
Sbjct: 21 LRELGQGSFGMVYEGN---ARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMK 74
Query: 227 YRGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEG-MGNRLQQLKCFTEHFALFNF 285
C+ H L+ G + ++ E G + + L+ L+ E+
Sbjct: 75 GFTCH---HVVRLLGVVSKGQPTLVV------MELMAHGDLKSYLRSLRPEAEN------ 119
Query: 286 EVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIK 345
+ P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG
Sbjct: 120 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
Query: 346 CPANSF------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 387
+ + + WMAPE ++ +G + D+WS G+ E+
Sbjct: 180 YETDYYRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVVLWEI 224
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 50 PLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANS 109
P +E+ + + + G+ YL++ +HRD+ A N ++ TVK+ DFG +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
Query: 110 F------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 142
+ + WMAPE ++ +G + D+WS G+
Sbjct: 185 YRKGGKGLLPVRWMAPE---SLKDGVFTTSSDMWSFGVV 220
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 157 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 167 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 198
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 152
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 157 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 167 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 198
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 152
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 162 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 172 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 203
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 29/124 (23%)
Query: 266 MGNRLQQLKCFTEHFALFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 325
+G ++Q+ C E AL+ L GL YLH+ +H DVKA N
Sbjct: 137 LGQLIKQMGCLPEDRALYYL----------------GQALEGLEYLHTRRILHGDVKADN 180
Query: 326 ILLTETGT-VKLADFGSASIKCP---------ANSFVGTPYWMAPEVILAMDEGQYDGKV 375
+LL+ G+ L DFG A P + GT MAPEV++ D KV
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP---CDAKV 237
Query: 376 DVWS 379
D+WS
Sbjct: 238 DIWS 241
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 63 VLRGLNYLHSLGRIHRDVKAGNILLTETGT-VKLADFGSASIKCP---------ANSFVG 112
L GL YLH+ +H DVKA N+LL+ G+ L DFG A P + G
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 113 TPYWMAPEVILAMDEGQYDGKVDVWS 138
T MAPEV++ D KVD+WS
Sbjct: 219 TETHMAPEVVMGKP---CDAKVDIWS 241
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 648 VLRGLNYLHSLGRIHRDVKAGNILLTETGT 677
L GL YLH+ +H DVKA N+LL+ G+
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSDGS 188
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 63/253 (24%)
Query: 170 IGHGSFGAVYYARCLVSREIVAIKKMSYLGKQCAEKWADI-LKEIRFLRQLK-HPNTIEY 227
+G+GS G V + R VA+K+M + DI L EI+ L + HPN I Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRY 74
Query: 228 RGCYLRDHTAWLVMEYCLGSASDIIEVHWIEREFHVEGMGNRLQQLKCFTEHFALFNFEV 287
D ++ +E C + D++E + E N ++
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDE-----------------------NLKL 111
Query: 288 HKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN---------------------I 326
KE ++ + G+ +LHSL IHRD+K N I
Sbjct: 112 Q----KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 327 LLTETGTVKLADFGSASIKCPANSFVGTPYWMAPEVILAMDEGQYDGK----VDVWSLG- 381
L+++ G K D G + N+ GT W APE++ + Q + +D++S+G
Sbjct: 168 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 382 ITCIELAERKPPY 394
+ L++ K P+
Sbjct: 228 VFYYILSKGKHPF 240
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 13 HPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRG 66
HPN I Y D ++ +E C + D++E + KE ++ + G
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 67 LNYLHSLGRIHRDVKAGN---------------------ILLTETGTVKLADFGSASIKC 105
+ +LHSL IHRD+K N IL+++ G K D G +
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 106 PANSFVGTPYWMAPEVILAMDEGQYDGK----VDVWSLG 140
N+ GT W APE++ + Q + +D++S+G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 616 LVMEYCLGSASDIIEVHK------RPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGN 669
+ +E C + D++E + KE ++ + G+ +LHSL IHRD+K N
Sbjct: 86 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 145
Query: 670 ILLTETGTVKLDTPDEQAG 688
IL++ + T D+Q G
Sbjct: 146 ILVSTSSRF---TADQQTG 161
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 101 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 161 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 214
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 171 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 202
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 156
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 162 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 172 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 203
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 204 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 257
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 214 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 245
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 162 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 172 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 203
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 204 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 257
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 214 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 245
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 190 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 200 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 231
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 189 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 199 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 230
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 190 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 200 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 231
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 189 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 199 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 230
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 190 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 200 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 231
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 190 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 200 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 231
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 59/280 (21%)
Query: 143 PGSLKDPEIAELFDKEDPEKIFEDLREIGHGSFGAVYYA--RCLVSREIVAIKKMSYLGK 200
P LKD +LF K D + D+ E+G G+FG+V R + VAIK + K
Sbjct: 322 PEELKD---KKLFLKRD-NLLIADI-ELGCGNFGSVRQGVYRMRKKQIDVAIKVL----K 372
Query: 201 QCAEK--WADILKEIRFLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHWIE 258
Q EK ++++E + + QL +P + G + LVME G
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGP---------- 421
Query: 259 REFHVEGMGNRLQQLKCFTEHFALFNFEVHKRP-LKEEEIAAICSGVLRGLNYLHSLGRI 317
L F V KR + +A + V G+ YL +
Sbjct: 422 -----------------------LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 318 HRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-------YWMAPEVILAMDEGQ 370
HR++ A N+LL K++DFG + +S+ W APE I + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI---NFRK 515
Query: 371 YDGKVDVWSLGITCIE-LAERKPPYFNMNAMSALYHIAQN 409
+ + DVWS G+T E L+ + PY M + I Q
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 555
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 5 SSLLRQLKHPNTIEYRGCYLRDHTAWLVMEYCLGSASDIIEVHKRP-LKEEEIAAICSGV 63
+ ++ QL +P + G + LVME G V KR + +A + V
Sbjct: 387 AQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 445
Query: 64 LRGLNYLHSLGRIHRDVKAGNILLTETGTVKLADFGSASIKCPANSFVGTP-------YW 116
G+ YL +HR++ A N+LL K++DFG + +S+ W
Sbjct: 446 SMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 505
Query: 117 MAPEVILAMDEGQYDGKVDVWSLGIT 142
APE I + ++ + DVWS G+T
Sbjct: 506 YAPECI---NFRKFSSRSDVWSYGVT 528
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 116 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 176 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 229
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 186 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 217
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 171
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 189 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 199 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 230
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 189 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 199 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 230
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 116 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 176 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 229
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 186 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 217
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 171
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 282 LFNFEVHKRPLKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFG 340
LF+F + L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFG
Sbjct: 117 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
Query: 341 SASI--KCPANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPY 394
S ++ F GT + PE I +Y G+ VWSLGI ++ P+
Sbjct: 177 SGALLKDTVYTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGILLYDMVCGDIPF 230
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKLADFGSASI--KCPA 107
L+EE + VL + + H+ G +HRD+K NIL+ G +KL DFGS ++
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 108 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGI 141
F GT + PE I +Y G+ VWSLGI
Sbjct: 187 TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGI 218
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 636 LKEEEIAAICSGVLRGLNYLHSLGRIHRDVKAGNILL-TETGTVKL 680
L+EE + VL + + H+ G +HRD+K NIL+ G +KL
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 172
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,211,811
Number of Sequences: 62578
Number of extensions: 1018591
Number of successful extensions: 9091
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 2736
Number of HSP's gapped (non-prelim): 4114
length of query: 804
length of database: 14,973,337
effective HSP length: 107
effective length of query: 697
effective length of database: 8,277,491
effective search space: 5769411227
effective search space used: 5769411227
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)