BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17954
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95V32|RS6_SPOFR 40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1
Length = 253
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 124/193 (64%), Gaps = 56/193 (29%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+S+PATGCQKL E+ DEHKLR+FY+KRMG EV AD +GDEWKGY++RI+GGNDKQG
Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD +PRRLGPKRASKIRKLFNLSKEDDVR+YV+KR L PAKEGK+ + YKA
Sbjct: 121 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRLL---PAKEGKENAKPRYKA 177
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TPV LQ
Sbjct: 178 PKIQRLVTPVVLQ 190
>sp|Q94624|RS6_MANSE 40S ribosomal protein S6 OS=Manduca sexta GN=RpS6 PE=2 SV=1
Length = 253
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 123/193 (63%), Gaps = 56/193 (29%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+S+PATGCQKL E+ DEHKLR+FY+KRMG EV AD +GDEWKGY++R++GGNDKQG
Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD +PRRLGPKRASKIRKLFNLSKEDDVR+YV+K L PAKEGK+ + YKA
Sbjct: 121 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKALL---PAKEGKENAKPRYKA 177
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TPV LQ
Sbjct: 178 PKIQRLVTPVVLQ 190
>sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 OS=Aplysia californica GN=RPS6 PE=2 SV=1
Length = 247
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 119/193 (61%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYPATGCQKL+E+ DE KLR FYDKR+ E+ AD +GDEWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCYRPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGEQD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD TIPRRLGPKRASKIRKLFNLSKEDDVRQYV++R LP + K+ K KA
Sbjct: 121 IPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYVVRRPLPERDGKKAK------SKA 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TPV LQ
Sbjct: 175 PKIQRLVTPVVLQ 187
>sp|P29327|RS6_DROME 40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1
SV=1
Length = 248
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 121/193 (62%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+SYPATGCQKL E+ DEHKLRVFY+KRMG V AD +GDEWKGY +RI+GGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTTIPRRLGPKRASKIRKL+NLSKEDDVR++V++R P PAK+ KK KA
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRR---PLPAKDNKKAT---SKA 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRLITPV LQ
Sbjct: 175 PKIQRLITPVVLQ 187
>sp|P39017|RS6_XENLA 40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1
Length = 249
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 119/193 (61%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD +GDEWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD T+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L AKEGKK KA
Sbjct: 121 IPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----AKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|Q2PQM1|RS6_GLOMM 40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6
PE=2 SV=1
Length = 248
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 120/193 (62%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+SYPATGCQKL E+ DEHKLRVFY+K MG V AD +GDEWKGY++RISGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVNDEHKLRVFYEKHMGQVVEADILGDEWKGYMLRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHDRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDT++PRRLGPKRASKIRKL+NLSK DDVR YVI+R P PAK+ KK + KA
Sbjct: 121 IPGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYVIRR---PLPAKDNKKAI---SKA 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRLITPV LQ
Sbjct: 175 PKIQRLITPVVLQ 187
>sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1
Length = 249
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 120/193 (62%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD++G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L KEGKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1
Length = 249
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 120/193 (62%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD++G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L KEGKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1
Length = 249
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 120/193 (62%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD++G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L KEGKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1
Length = 249
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 120/193 (62%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD++G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L KEGKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus punctatus GN=rps6 PE=2 SV=1
Length = 249
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 119/193 (61%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD +GDEWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD+T+PRRLGPKRAS+IRKLFNLSKEDDVRQYV++R L KEGKK KA
Sbjct: 121 IPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRRPL----TKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|O01727|RS6_BRAFL 40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3
SV=1
Length = 244
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 121/193 (62%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MK+NISYPATGCQKL+E+ DE KLR FY+KRM ++ A+S+GDEWKGY+VRISGGNDKQG
Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTTIPRRLGPKRA +IRKLFNL+KEDDVRQYV++R P P KEGKK+ +K
Sbjct: 121 IPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYVVRR---PLPQKEGKKQK---FKT 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRLITP LQ
Sbjct: 175 PKIQRLITPQRLQ 187
>sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1
Length = 249
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 119/193 (61%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD +GDEWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCYRPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD+T+PRRLGPKRASKIRKLFNL+KEDDVRQYV++R L KEGKK KA
Sbjct: 121 IPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYVVRRPL----TKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
P+IQRL+TP LQ
Sbjct: 174 PRIQRLVTPRVLQ 186
>sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1
Length = 249
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 120/193 (62%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE KLR FY+KRM EV AD++G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L K+GKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKDGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|P47838|RS6_CHICK 40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1
Length = 249
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 119/193 (61%), Gaps = 60/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNIS+PATGCQKL+E+ DE +R FY+KRM EV ADS+G+EWKGY+VRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS+IRKLFNLSKEDDVRQYV+++ L KEGKK KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKK---PRTKA 173
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 174 PKIQRLVTPRVLQ 186
>sp|Q9U761|RS6_AEDAE 40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2
Length = 346
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 117/193 (60%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+S+PATG QK E+ D+HKLR FYDKRMG E+ AD +GDEWKGY+ +I+GGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+PRRLGPKRAS IRKL+NL+KEDDVRQ+V+KR LP K K+ + KA
Sbjct: 121 IPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFVVKRPLPEKDGKKAR------TKA 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRLITPV LQ
Sbjct: 175 PKIQRLITPVVLQ 187
>sp|Q9U762|RS6_AEDAL 40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1
Length = 349
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 116/193 (60%), Gaps = 59/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLN+S+PATG QK E+ D+HKLR FYDKRMG E+ AD +GDEWKGY+ +I+GGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTDTT+ RRLGPKRAS IRKL+NL+KEDDVRQYV+KR LP K K+ + KA
Sbjct: 121 IPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKKPR------TKA 174
Query: 128 PKIQRLITPVTLQ 140
PKIQRLITPV LQ
Sbjct: 175 PKIQRLITPVVLQ 187
>sp|Q9C0Z7|RS6B_SCHPO 40S ribosomal protein S6-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps6b PE=1 SV=1
Length = 239
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 116/193 (60%), Gaps = 58/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYPA G QKL+EI D+ +LRVF +KRMG EVP DS+G E+ GY+ +I+GGNDKQG
Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPM QG +
Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD T+P+RLGPKRASKIR+ FNLSKEDDVRQ+VI+R + PK KEGKK KA
Sbjct: 121 IPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFVIRREVVPK--KEGKK---PYTKA 175
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP TLQ
Sbjct: 176 PKIQRLVTPRTLQ 188
>sp|P05752|RS6A_SCHPO 40S ribosomal protein S6-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps6a PE=1 SV=2
Length = 239
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 116/193 (60%), Gaps = 58/193 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYPA G QKL+EI D+ +LRVF +KRMG EVP DS+G E+ GY+ +I+GGNDKQG
Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPM QG +
Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGEQD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD T+P+RLGPKRASKIR+ FNLSKEDDVRQ+VI+R + PK KEGKK KA
Sbjct: 121 IPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFVIRREVVPK--KEGKK---PYTKA 175
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP TLQ
Sbjct: 176 PKIQRLVTPRTLQ 188
>sp|Q6BXH8|RS6_DEBHA 40S ribosomal protein S6 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPS6 PE=3 SV=1
Length = 236
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 112/193 (58%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYPA G QK ++I DEHKLRVFY+KRMG EV D++GDE+KGYI RI+GGNDKQG
Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCYRPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGDSD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
I GLTDTT P+RLGPKRA+ IRK F L+KEDDVRQ+V++R E K +K KA
Sbjct: 121 IEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFVVRR--------EVVKGDKKYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP TLQ
Sbjct: 173 PKIQRLVTPQTLQ 185
>sp|Q6C169|RS6_YARLI 40S ribosomal protein S6 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPS6 PE=3 SV=1
Length = 242
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 109/192 (56%), Gaps = 60/192 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNI+YPA G QK ++I DEH++R FY+KRMG EV AD +GDE+KGY+++I+GGNDKQG
Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG +
Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCYRSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGDAD 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
I GLT T+PRRLGPKRA+ IRKLF LSKEDDVRQYVI+R + K K KA
Sbjct: 121 IEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYVIRREVTTKSGKT-------YTKA 173
Query: 128 PKIQRLITPVTL 139
PKIQRLITP L
Sbjct: 174 PKIQRLITPRRL 185
>sp|P0CX38|RS6B_YEAST 40S ribosomal protein S6-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS6B PE=1 SV=1
Length = 236
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 108/193 (55%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYP G QK EI DEH++RVF+DKR+G EV +++GDE+KGY+ +ISGGNDKQG
Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
+ GLTDTT+P+RLGPKRA+ IRK F LSKEDDVR +VI+R E K + KA
Sbjct: 121 LEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVIRR--------EVTKGEKTYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 173 PKIQRLVTPQRLQ 185
>sp|P0CX37|RS6A_YEAST 40S ribosomal protein S6-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS6A PE=1 SV=1
Length = 236
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 108/193 (55%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYP G QK EI DEH++RVF+DKR+G EV +++GDE+KGY+ +ISGGNDKQG
Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
+ GLTDTT+P+RLGPKRA+ IRK F LSKEDDVR +VI+R E K + KA
Sbjct: 121 LEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVIRR--------EVTKGEKTYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 173 PKIQRLVTPQRLQ 185
>sp|Q6CM04|RS6_KLULA 40S ribosomal protein S6 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPS6 PE=3 SV=1
Length = 236
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 108/193 (55%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYP G QK +EI DEH++RVFYDKR+G EV +S+GDE+KGY+ +I+GGNDKQG
Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCYRPRRNGERKRKSVRGAIVGPDLAVLALIITKKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
I G+T+ T+P+RLGPKRA+ IRK F L+KEDDVR YVI+R E K + KA
Sbjct: 121 IEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYVIRR--------EVTKGDKSYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 173 PKIQRLVTPQRLQ 185
>sp|P41798|RS6_KLUMA 40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3
SV=1
Length = 235
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 109/194 (56%), Gaps = 63/194 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYP G QK VEI DEH++RVFYDKR+G EV +++GDE+KGY+ +I+GGNDKQG
Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGDQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLY-K 126
I G+T+ T+P+RLGPKRA+ IRK F L+KEDDVR YVI+R + K K Y K
Sbjct: 121 IEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYVIRREVT---------KGEKTYTK 171
Query: 127 APKIQRLITPVTLQ 140
APKIQRL+TP LQ
Sbjct: 172 APKIQRLVTPQRLQ 185
>sp|Q6FJH3|RS6_CANGA 40S ribosomal protein S6 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS6A
PE=3 SV=1
Length = 236
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 107/193 (55%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNI+YP G QK VE+ DEH++RVFYDKR+G E+ +++GDE+KGY +I+GGNDKQG
Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCYRPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGEQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
+ G+TD T+P+RLGPKRA+ IRK F L+KEDDVR +VI+R E K + KA
Sbjct: 121 LEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFVIRR--------EVTKGEKTYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 173 PKIQRLVTPQRLQ 185
>sp|Q9NEN6|RS6_CAEEL 40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1
SV=1
Length = 246
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 105/194 (54%), Gaps = 64/194 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
M+LN +YPATG QK E+ +E KLR+F++KRM EV D++GDEWKGY+VRI GGNDKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 61 FPMKQ-----------------------------------------------------GE 67
FPMKQ GE
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIK--RTLPPKPAKEGKKKVRKLY 125
I GLTD+ +PR+LGPKRASKIRKLFNL+K DDV +YVI +T P K
Sbjct: 121 IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKT--------- 171
Query: 126 KAPKIQRLITPVTL 139
APKIQRLITP +
Sbjct: 172 IAPKIQRLITPARI 185
>sp|Q74ZK3|RS6_ASHGO 40S ribosomal protein S6 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS6 PE=3 SV=1
Length = 236
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 108/193 (55%), Gaps = 61/193 (31%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNISYP G QK +E+ DEH++RVFYDKR+G EV +++GDE+KGY+ +I+GGNDKQG
Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPMKQG E
Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRGAIVGPDLAVLALIITKKGDQE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
I G+T+ ++P+RLGPKRA+ IRK F L+K+DDVR +VI+R E K + KA
Sbjct: 121 IEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFVIRR--------EVVKGDKTYTKA 172
Query: 128 PKIQRLITPVTLQ 140
PKIQRL+TP LQ
Sbjct: 173 PKIQRLVTPQRLQ 185
>sp|Q54UU3|RS6_DICDI 40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1
SV=1
Length = 236
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 103/192 (53%), Gaps = 59/192 (30%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MKLNI+YP G QK + I D++K+R F +KR+G EV A ++GDE+KGY+ +I+GGND +G
Sbjct: 1 MKLNIAYPVNGSQKKINIEDKNKVRCFMEKRIGQEVEATTLGDEFKGYVFKITGGNDTEG 60
Query: 61 FPMKQG-----------------------------------------------------E 67
FPM QG E
Sbjct: 61 FPMMQGVGAPTRVRLLLDGRSGCFKPSRDGERKRKSVRGCIVAEDIASLQLIIVKKGDAE 120
Query: 68 IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKA 127
IPGLTD + P GPKRAS IRKLF LSK++DVR +VI+R LP ++ K KA
Sbjct: 121 IPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFVIRRELPATDKRKAK------SKA 174
Query: 128 PKIQRLITPVTL 139
PKIQRL+TP T+
Sbjct: 175 PKIQRLVTPTTV 186
>sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1
SV=3
Length = 249
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 105/197 (53%), Gaps = 64/197 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MK N++ P TGCQK +EI D+ KLR F+DKR+ EV D++G+E+KGY+ +I GG DKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 61 FPMKQGEIP-------------------------------------------------GL 71
FPMKQG + G+
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120
Query: 72 TD------TTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--IKRTLPPKPAKEGKKKVRK 123
+D T PR GPKRASKIRKLFNL KEDDVR+YV +RT K K K
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGK-------K 173
Query: 124 LYKAPKIQRLITPVTLQ 140
+ KAPKIQRL+TP+TLQ
Sbjct: 174 VSKAPKIQRLVTPLTLQ 190
>sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1
Length = 251
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 102/197 (51%), Gaps = 64/197 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MK NI+ P TGCQK +EI D+ KLR FYDKR+ EV D++G+E+KGY+ +I GG DKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 61 FPMKQGEI-PG----LTDTTIP------RRLGPKR------------------------- 84
FPMKQG + PG L P RR G +R
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 85 -------------------ASKIRKLFNLSKEDDVRQYV--IKRTLPPKPAKEGKKKVRK 123
ASKIRKLFNLSKEDDVR+YV +RT K K
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKT------- 173
Query: 124 LYKAPKIQRLITPVTLQ 140
KAPKIQRL+TP+TLQ
Sbjct: 174 CSKAPKIQRLVTPLTLQ 190
>sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1
SV=2
Length = 250
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 101/197 (51%), Gaps = 64/197 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
MK N++ P TGCQK +EI D+ KLR FYDKR+ EV D++G+E+KGY+ +I GG DKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60
Query: 61 FPMKQGEI-PG----LTDTTIP------RRLGPKR------------------------- 84
FPMKQG + PG L P RR G +R
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 85 -------------------ASKIRKLFNLSKEDDVRQYV--IKRTLPPKPAKEGKKKVRK 123
ASKIRKLFNL KEDDVR YV +R K KE
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKE------- 173
Query: 124 LYKAPKIQRLITPVTLQ 140
+ KAPKIQRL+TP+TLQ
Sbjct: 174 VSKAPKIQRLVTPLTLQ 190
>sp|Q9NE83|RS6_LEIMA 40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1
Length = 249
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 94/192 (48%), Gaps = 63/192 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRV-FYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQ 59
MKLNI+YP G K EI+DE RV D R+G EV G E+KGYI R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 60 GFPM--------------------------KQGE-------------------------- 67
GFPM QGE
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 68 ---IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKL 124
I G+TDTT PRRLGPKRASKIRKLFNLS+ +DVR+Y + + K GKK
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKY----VVRRRVVKSGKK---DR 173
Query: 125 YKAPKIQRLITP 136
KAPKIQRLITP
Sbjct: 174 LKAPKIQRLITP 185
>sp|O44012|RS6_LEIIN 40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1
Length = 249
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 91/192 (47%), Gaps = 63/192 (32%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRV-FYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQ 59
M LNI+YP G K EI+DE RV D R+G EV G E+KGYI R+ GG+DK
Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 60 GFPM--------------------------KQGE-------------------------- 67
GFPM QGE
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 68 ---IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKL 124
I G+TDTT PRRLGPKRASKIRKLFNLS+ +D V K + + K GKK
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTED----VRKYVVRRRVVKSGKK---DR 173
Query: 125 YKAPKIQRLITP 136
KAPKIQRLITP
Sbjct: 174 LKAPKIQRLITP 185
>sp|P29345|RS6_TOBAC 40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6
PE=2 SV=2
Length = 199
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 61/150 (40%), Gaps = 65/150 (43%)
Query: 46 KGYIVRISGGNDKQGFPM------------------------------------------ 63
KGY+ +I GG DKQGFPM
Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60
Query: 64 -----------KQGE--IPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLP 110
K+GE +PGLTDT PR GP+ + L+ KEDDVR+YV
Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYV------ 112
Query: 111 PKPAKEGKKKVRKLYKAPKIQRLITPVTLQ 140
E K K KAPKIQRL+TP+TLQ
Sbjct: 113 -NTTAEFTTKW-KGSKAPKIQRLVTPLTLQ 140
>sp|Q8SRY0|RS6_ENCCU 40S ribosomal protein S6 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS6 PE=3 SV=1
Length = 203
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 LVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQGFPMKQGEI 68
+ EI +++R+ YDK++G + +G+E++G I+ I+GG+D QGFPM G +
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHL 53
>sp|Q5JDK8|RS6E_PYRKO 30S ribosomal protein S6e OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rps6e PE=3 SV=1
Length = 125
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYI---------VR 51
KL IS P G K VEI+ ++ +R+G E+PA +G ++
Sbjct: 4 FKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAKLK 62
Query: 52 ISGGNDKQGFPMK 64
I+GG DK GFPM+
Sbjct: 63 ITGGTDKDGFPMR 75
>sp|B6YW70|RS6E_THEON 30S ribosomal protein S6e OS=Thermococcus onnurineus (strain NA1)
GN=rps6e PE=3 SV=1
Length = 125
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYI---------VR 51
KL IS P G + VEI+ E ++ KR+G E+ A +G ++
Sbjct: 4 FKLVISNPKNGIARQVEISGEEAEKLI-GKRIGEEISAKELGLNLTEIFGEEIPADTKLK 62
Query: 52 ISGGNDKQGFPMK 64
I+GG DK GFPM+
Sbjct: 63 ITGGTDKDGFPMR 75
>sp|Q0W8B4|RS6E_UNCMA 30S ribosomal protein S6e OS=Uncultured methanogenic archaeon
RC-I GN=rps6e PE=3 SV=1
Length = 142
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
KL +S P TG V++ ++ F K +G E+ ++ G GY + I+GG+DK G
Sbjct: 4 FKLVVSDPKTGKAYNVDVTGP-RVNKFIGKPIGSEIDGETAG--LPGYKLIITGGSDKDG 60
Query: 61 FPMKQGEIPG 70
PM+ G+IPG
Sbjct: 61 IPMR-GDIPG 69
>sp|O58349|RS6E_PYRHO 30S ribosomal protein S6e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps6e PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYI---------VR 51
KL IS P +G K +EI+ + ++ K++G ++P +G + K +
Sbjct: 4 FKLVISDPKSGIAKQIEISGANAEKLI-GKKIGDQIPVKELGLDLKALFGKDFPEDVKME 62
Query: 52 ISGGNDKQGFPMK 64
I GG DK GFPM+
Sbjct: 63 IRGGTDKDGFPMR 75
>sp|Q8U3H8|RS6E_PYRFU 30S ribosomal protein S6e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps6e PE=1 SV=1
Length = 125
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 14/75 (18%)
Query: 1 MKLNISYPATGCQKLVEI--ADEHKLRVFYDKRMGMEVPADSI--------GDEWKGYI- 49
KL IS P +G K VEI A+ KL KR+G ++PA + G E+ +
Sbjct: 4 FKLVISDPKSGIAKQVEITGAETEKL---IGKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 50 VRISGGNDKQGFPMK 64
+ I GG DK GFPM+
Sbjct: 61 LEIRGGTDKDGFPMR 75
>sp|O29739|RS6E_ARCFU 30S ribosomal protein S6e OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps6e PE=3 SV=1
Length = 129
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 1 MKLNISYPATG--CQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDK 58
++ IS P TG QK+VE A+ ++L K++G +V + +I D Y ++I+GG D+
Sbjct: 3 FRVVISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDR 58
Query: 59 QGFPMKQGEIPGLTDTTIPRRL 80
GFPM+ ++PG T RRL
Sbjct: 59 DGFPMRP-DLPG----TARRRL 75
>sp|Q2NGM7|RS6E_METST 30S ribosomal protein S6e OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=rps6e PE=3 SV=1
Length = 130
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 31 RMGMEVPADSIGDEWKGYIVRISGGNDKQGFPMKQ 65
++G E +G KGY +RI+GG+DK GFPMK+
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKE 62
>sp|Q9UYS3|RS6E_PYRAB 30S ribosomal protein S6e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps6e PE=3 SV=1
Length = 125
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIG---DEWKG------YIVR 51
KL IS P TG K +EI ++ KR+G ++P +G +E G +
Sbjct: 4 FKLVISDPKTGIAKQIEITGPEAEKLI-GKRIGDQIPVKELGINLNELFGKEFPEDVKME 62
Query: 52 ISGGNDKQGFPMK 64
I GG DK GFPM+
Sbjct: 63 IRGGTDKDGFPMR 75
>sp|A3CSP5|RS6E_METMJ 30S ribosomal protein S6e OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps6e PE=3 SV=1
Length = 132
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
K+ +S P TG ++ A F KR+G E+ D +G + GY ++I+G DK G
Sbjct: 4 FKIILSDPETGRSYKID-ATGPAAGGFVGKRIGDEIDGDVLG--FAGYTIKITGATDKTG 60
Query: 61 FPMKQGEIPG 70
P ++ ++PG
Sbjct: 61 IPSRR-DLPG 69
>sp|C5A7C4|RS6E_THEGJ 30S ribosomal protein S6e OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps6e PE=3 SV=1
Length = 125
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYI---------VR 51
K+ IS P G + +EI+ + ++ KR+G E+P +G ++
Sbjct: 4 FKVVISNPKNGIARQIEISGDAAEKLI-GKRIGDEIPVKELGINLSEIFGQEIPEDAKLK 62
Query: 52 ISGGNDKQGFPMK 64
I GG DK GFPM+
Sbjct: 63 IKGGTDKDGFPMR 75
>sp|O26360|RS6E_METTH 30S ribosomal protein S6e OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps6e PE=3 SV=1
Length = 126
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 22/80 (27%)
Query: 40 SIGDEWKGYIV-------RISGGNDKQGFPMKQGEIPG------LTDTTI---PRRLGPK 83
+IGDE+ G I+ +I+GG+DK GFPMK+ +PG L + PRR G +
Sbjct: 30 TIGDEFDGSIIGLSGYKLKITGGSDKNGFPMKK-TVPGARRIRSLVSGGVGYKPRRDGER 88
Query: 84 RASKIRKLFNLSK-EDDVRQ 102
R RK F + DD+ Q
Sbjct: 89 R----RKTFRGNTISDDIVQ 104
>sp|Q2FU50|RS6E_METHJ 30S ribosomal protein S6e OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps6e PE=3 SV=1
Length = 135
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
K+ +S PATG ++ A F KR+G E+ ++G + GY +RI+G +D+ G
Sbjct: 4 FKVVLSDPATGKAYNID-ASGAGAGSFIGKRIGEEIDGAALG--FDGYKIRITGASDRNG 60
Query: 61 FPMKQ 65
P ++
Sbjct: 61 TPARK 65
>sp|Q74MJ5|RS6E_NANEQ 30S ribosomal protein S6e OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rps6e PE=3 SV=1
Length = 126
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 1 MKLNISYPATGCQKLVEIADEHKLRVFYDKRMGMEVPADSIGDEWKGYIVRISGGNDKQG 60
+K+ +S P +G +E + L Y K++G + IG + GY ++I+GG+D G
Sbjct: 7 VKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDIAG 61
Query: 61 FPMKQGEIPG 70
FPM++ E+ G
Sbjct: 62 FPMRK-EVEG 70
>sp|C6A2D7|RS6E_THESM 30S ribosomal protein S6e OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rps6e PE=3 SV=1
Length = 126
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 1 MKLNISYPATGCQKLVEI--ADEHKLRVFYDKRMGMEVPADSIG--------DEWKGYI- 49
KL IS TG K +EI A+ KL R+G E+ A +G E G +
Sbjct: 4 FKLVISDTKTGVAKQIEITGAEADKL---IGLRIGDEIEAKELGFNLSEIFGSEIPGDVK 60
Query: 50 VRISGGNDKQGFPMK 64
++I+GG DK GFPM+
Sbjct: 61 LKITGGTDKDGFPMR 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,462,399
Number of Sequences: 539616
Number of extensions: 2230577
Number of successful extensions: 5653
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5529
Number of HSP's gapped (non-prelim): 108
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)