Query psy17955
Match_columns 547
No_of_seqs 98 out of 121
Neff 4.4
Searched_HMMs 13730
Date Fri Aug 16 18:39:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17955.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17955hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bika1 g.8.1.1 (A:25-78) Biku 21.5 13 0.00095 26.6 0.9 15 28-42 33-47 (54)
2 d1bika2 g.8.1.1 (A:79-134) Bik 21.4 13 0.00096 26.7 0.9 15 28-42 35-49 (56)
3 d1shpa_ g.8.1.1 (A:) Trypsin i 21.1 13 0.00098 26.5 0.9 15 28-42 34-48 (55)
4 d1bunb_ g.8.1.1 (B:) beta2-bun 20.5 14 0.001 26.9 0.9 15 28-42 38-52 (61)
5 d1g6xa_ g.8.1.1 (A:) Pancreati 20.4 14 0.001 26.6 0.9 15 28-42 36-50 (58)
6 d1aapa_ g.8.1.1 (A:) Alzheimer 19.5 15 0.0011 26.4 0.9 15 28-42 36-50 (56)
7 d1zr0b1 g.8.1.1 (B:1A-59) Tiss 18.7 17 0.0012 26.8 0.9 15 28-42 40-54 (63)
8 d1dtxa_ g.8.1.1 (A:) alpha-Den 17.8 18 0.0013 26.2 0.9 15 28-42 38-52 (59)
9 d1ktha_ g.8.1.1 (A:) Collagen 17.4 18 0.0013 26.2 0.8 15 28-42 36-50 (58)
10 d1dtka_ g.8.1.1 (A:) Dendrotox 16.6 19 0.0014 25.9 0.9 15 28-42 36-50 (57)
No 1
>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=13 Score=26.59 Aligned_cols=15 Identities=47% Similarity=0.656 Sum_probs=10.5
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|+.+
T Consensus 33 ~GC~GN~NnF~t~~~ 47 (54)
T d1bika1 33 GGCMGNGNNFVTEKE 47 (54)
T ss_dssp CSSSCCSCCBSSHHH
T ss_pred CCccCCccCcCCHHH
Confidence 444567799998754
No 2
>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.39 E-value=13 Score=26.73 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=10.3
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 35 ~GC~GN~NnF~t~~~ 49 (56)
T d1bika2 35 GGCQGNGNKFYSEKE 49 (56)
T ss_dssp CSSSCCSCCBSSHHH
T ss_pred CCeeCCccCcCCHHH
Confidence 344557799998754
No 3
>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}
Probab=21.13 E-value=13 Score=26.53 Aligned_cols=15 Identities=53% Similarity=0.955 Sum_probs=10.4
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 34 ~GC~GN~N~F~t~~~ 48 (55)
T d1shpa_ 34 GGCGGNGNNFETLHQ 48 (55)
T ss_dssp CSTTCCSSCBSSHHH
T ss_pred CCccCCccCcCCHHH
Confidence 444567799998754
No 4
>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]}
Probab=20.52 E-value=14 Score=26.94 Aligned_cols=15 Identities=33% Similarity=0.554 Sum_probs=10.5
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 38 ~GC~GN~N~F~t~~~ 52 (61)
T d1bunb_ 38 GGCNGNGNHFKSDHL 52 (61)
T ss_dssp CSCCSSSCCBSSHHH
T ss_pred CCccCccCCcCCHHH
Confidence 444567799998754
No 5
>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.36 E-value=14 Score=26.64 Aligned_cols=15 Identities=33% Similarity=0.550 Sum_probs=10.4
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 36 ~GC~gN~N~F~t~~~ 50 (58)
T d1g6xa_ 36 GGCRAKRNNFKSAED 50 (58)
T ss_dssp CSSSCCSSCBSSHHH
T ss_pred CCccCCcCCcCCHHH
Confidence 344557799998754
No 6
>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.47 E-value=15 Score=26.36 Aligned_cols=15 Identities=53% Similarity=0.796 Sum_probs=10.2
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 36 ~GCgGN~NnF~t~~~ 50 (56)
T d1aapa_ 36 GGCGGNRNNFDTEEY 50 (56)
T ss_dssp CSSSCCSCCBSSHHH
T ss_pred CCccCCccCcCCHHH
Confidence 344557899998653
No 7
>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.66 E-value=17 Score=26.77 Aligned_cols=15 Identities=47% Similarity=0.691 Sum_probs=10.3
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 40 ~GCgGN~NnF~t~~~ 54 (63)
T d1zr0b1 40 GGCEGNANNFYTWEA 54 (63)
T ss_dssp CSSCCCSSCBSSHHH
T ss_pred CCccCCCcCcCCHHH
Confidence 444567799998754
No 8
>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Probab=17.82 E-value=18 Score=26.24 Aligned_cols=15 Identities=47% Similarity=0.796 Sum_probs=10.6
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||=|||.|+|.|..+
T Consensus 38 ~GCgGN~N~F~t~~~ 52 (59)
T d1dtxa_ 38 SGCGGNSNRFKTIEE 52 (59)
T ss_dssp CSSCCCSCCBSSHHH
T ss_pred CCccCCccCcCCHHH
Confidence 445567799998754
No 9
>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.36 E-value=18 Score=26.16 Aligned_cols=15 Identities=40% Similarity=0.842 Sum_probs=10.2
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 36 ~GCgGN~N~F~t~~~ 50 (58)
T d1ktha_ 36 GGCGGNENKFGSQKE 50 (58)
T ss_dssp CSBSCCSCCBSSHHH
T ss_pred CCccCCccCcCCHHH
Confidence 344557799998653
No 10
>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Probab=16.64 E-value=19 Score=25.89 Aligned_cols=15 Identities=47% Similarity=0.793 Sum_probs=10.3
Q ss_pred CCCCCcccchhhHHh
Q psy17955 28 GGGGGAPNNFATIRT 42 (547)
Q Consensus 28 ~~~~~~~~~Fate~~ 42 (547)
||-|||.|+|.|..+
T Consensus 36 ~GC~GN~NnF~t~~~ 50 (57)
T d1dtka_ 36 SGCGGNANRFKTIEE 50 (57)
T ss_dssp CSSSCCSCCBSSHHH
T ss_pred CCccCccCCcCCHHH
Confidence 344567799998653
Done!