RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy17963
(943 letters)
***** No hits found ******
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.299 0.112 0.276
Gapped
Lambda K H
0.267 0.0550 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 38,619,454
Number of extensions: 3368693
Number of successful extensions: 1577
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1577
Number of HSP's successfully gapped: 6
Length of query: 943
Length of database: 10,937,602
Length adjustment: 106
Effective length of query: 837
Effective length of database: 6,236,078
Effective search space: 5219597286
Effective search space used: 5219597286
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 64 (28.8 bits)