BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1797
(393 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VXB0|NECAP_DROME NECAP-like protein CG9132 OS=Drosophila melanogaster GN=CG9132 PE=2
SV=1
Length = 246
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 147/203 (72%), Gaps = 11/203 (5%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
MRLV K +LKLED+ SG LFA CPIDTYPGVAIE VSDSSRYFV+R++DD+GR AF+
Sbjct: 43 MRLVAKGTAVVLKLEDKTSGALFANCPIDTYPGVAIEAVSDSSRYFVIRVQDDNGRSAFL 102
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQELDLKFKEGETIKINMKITKK 120
GLGF DRSDSFDLNVALQDHFKW+K E+IEKEK EPKQELDL FKEGETIKINM+ITKK
Sbjct: 103 GLGFGDRSDSFDLNVALQDHFKWVKNQEQIEKEKTEPKQELDLGFKEGETIKINMRITKK 162
Query: 121 DGADGQGKAKTRPTSTGGLLPPPPGSGMSKISPPPAP---------SQNSSPIHQVNANA 171
DG++G + S+ G+LPPPPG G+ KI+PPPA S SP H+ A
Sbjct: 163 DGSEGSSRTGKNKGSS-GVLPPPPG-GLGKIAPPPAAAAANTTVRQSPGVSPAHRPAAGG 220
Query: 172 NNWGDFTSAAPAPAPQPSRAADW 194
+ W D+ SA Q S A+W
Sbjct: 221 SEWTDYASAGGNQGQQNSANANW 243
Score = 231 bits (588), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 105/133 (78%), Positives = 116/133 (87%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA DWNL+EP WTGRMRLV K +LKLED+ SG LFA CPIDTYPGVAIE VSDSSRY
Sbjct: 28 RAGDWNLKEPTWTGRMRLVAKGTAVVLKLEDKTSGALFANCPIDTYPGVAIEAVSDSSRY 87
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQELDLKF 309
FV+R++DD+GR AF+GLGF DRSDSFDLNVALQDHFKW+K E+IEKEK EPKQELDL F
Sbjct: 88 FVIRVQDDNGRSAFLGLGFGDRSDSFDLNVALQDHFKWVKNQEQIEKEKTEPKQELDLGF 147
Query: 310 KEGETIKINMKIT 322
KEGETIKINM+IT
Sbjct: 148 KEGETIKINMRIT 160
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 57/63 (90%)
Query: 331 GRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQELDLKFKEGETIKIN 390
GR AF+GLGF DRSDSFDLNVALQDHFKW+K E+IEKEK EPKQELDL FKEGETIKIN
Sbjct: 97 GRSAFLGLGFGDRSDSFDLNVALQDHFKWVKNQEQIEKEKTEPKQELDLGFKEGETIKIN 156
Query: 391 MKI 393
M+I
Sbjct: 157 MRI 159
>sp|Q9NVZ3|NECP2_HUMAN Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens
GN=NECAP2 PE=1 SV=1
Length = 263
Score = 198 bits (503), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 140/217 (64%), Gaps = 25/217 (11%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ K + +KLEDR SGELFAQ P+D +PG A+E+V+DSSRYFV+RI+D +GR+AFI
Sbjct: 46 LRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFI 105
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGETIKINM-KI 117
G+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL FKEG+TIK+N+ +
Sbjct: 106 GIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANM 165
Query: 118 TKKDGADGQGKAKTRPTSTGG--LLPPPPGSGMSKISPPP---------------APSQN 160
KK+GA G + RP STGG LLPPPPG S + PPP APS
Sbjct: 166 KKKEGA--AGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSG 223
Query: 161 SSPI--HQVN-ANANNWGDFTSAAPAPAPQPSRAADW 194
+P+ Q N A A+ WGDFT + + + Q W
Sbjct: 224 GAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGW 260
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RAA+W L +P W+GR+R+ K + +KLEDR SGELFAQ P+D +PG A+E+V+DSSRY
Sbjct: 31 RAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRY 90
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDL 307
FV+RI+D +GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL
Sbjct: 91 FVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDL 150
Query: 308 KFKEGETIKINM 319
FKEG+TIK+N+
Sbjct: 151 GFKEGQTIKLNI 162
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 329 GLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGET 386
G GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL FKEG+T
Sbjct: 98 GNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQT 157
Query: 387 IKINM 391
IK+N+
Sbjct: 158 IKLNI 162
>sp|Q5E9Q4|NECP2_BOVIN Adaptin ear-binding coat-associated protein 2 OS=Bos taurus
GN=NECAP2 PE=2 SV=1
Length = 266
Score = 198 bits (503), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 140/220 (63%), Gaps = 28/220 (12%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ K + +KLEDR SGELFAQ P+D +PG A+E+V+DSSRYFV+RI+D +GR+AFI
Sbjct: 46 LRITAKGQVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFI 105
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGETIKINM-KI 117
G+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL FKEG+TIK+N+ +
Sbjct: 106 GIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLSFKEGQTIKLNIASM 165
Query: 118 TKKDGADGQGKAKTRPTSTGG--LLPPPPGS---------------GMSKISPPPAPSQN 160
KKDGA G +A RPTSTGG LLPPPPG+ G S + P +PS
Sbjct: 166 KKKDGAAGTPRA--RPTSTGGLSLLPPPPGAKTAALAPLSGEHLSVGGSVVQPAVSPSSG 223
Query: 161 SS------PIHQVNANANNWGDFTSAAPAPAPQPSRAADW 194
+ P A A+ WGDFT + + + Q A W
Sbjct: 224 GATVSWPQPKPATTATADIWGDFTKSTGSTSSQTQPGAGW 263
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RAA+W L +P W+GR+R+ K + +KLEDR SGELFAQ P+D +PG A+E+V+DSSRY
Sbjct: 31 RAAEWQLDQPSWSGRLRITAKGQVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRY 90
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDL 307
FV+RI+D +GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL
Sbjct: 91 FVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDL 150
Query: 308 KFKEGETIKINM 319
FKEG+TIK+N+
Sbjct: 151 SFKEGQTIKLNI 162
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 329 GLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGET 386
G GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P Q +LDL FKEG+T
Sbjct: 98 GNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLSFKEGQT 157
Query: 387 IKINM 391
IK+N+
Sbjct: 158 IKLNI 162
>sp|Q6P756|NECP2_RAT Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus
GN=Necap2 PE=1 SV=2
Length = 263
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 136/217 (62%), Gaps = 25/217 (11%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ K K +KLEDR SGELFAQ P+D +PG A+E+V+DSSRYFV+RI+D +GR+AFI
Sbjct: 46 LRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFI 105
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGETIKINM-KI 117
G+GF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL FKEG+TIKIN+ +
Sbjct: 106 GIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDLGFKEGQTIKINIANM 165
Query: 118 TKKDGADGQGKAKTRPTSTGG--LLPPPPGSGMSKISPPPAPSQNSSPIHQ--------- 166
KK+GA G +TRP S GG LLPPPPG MS + PP + + Q
Sbjct: 166 RKKEGA--AGAPRTRPASAGGLSLLPPPPGGKMSTLIPPSGEQFSGGSLVQPVSGSGGAT 223
Query: 167 ---------VNANANNWGDFTSAAPAPAPQPSRAADW 194
A A+ WGDFT + +P+ Q W
Sbjct: 224 ELWPQSKPAAAATADIWGDFTKSTGSPSSQSQPGTGW 260
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA++W L +P W+GR+R+ K K +KLEDR SGELFAQ P+D +PG A+E+V+DSSRY
Sbjct: 31 RASEWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRY 90
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDL 307
FV+RI+D +GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL
Sbjct: 91 FVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDL 150
Query: 308 KFKEGETIKINM 319
FKEG+TIKIN+
Sbjct: 151 GFKEGQTIKINI 162
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 329 GLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGET 386
G GR+AFIG+GF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL FKEG+T
Sbjct: 98 GNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDLGFKEGQT 157
Query: 387 IKINM 391
IKIN+
Sbjct: 158 IKINI 162
>sp|Q9D1J1|NECP2_MOUSE Adaptin ear-binding coat-associated protein 2 OS=Mus musculus
GN=Necap2 PE=1 SV=1
Length = 266
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 28/220 (12%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ K K +KLEDR SGELFAQ P+D +PG A+E+V+DSSRYFV+RI+D +GR+AFI
Sbjct: 46 LRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFI 105
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGETIKINM-KI 117
GLGF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL FK+G+TIKIN+ +
Sbjct: 106 GLGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDLGFKDGQTIKINIANM 165
Query: 118 TKKDGADGQGKAKTRPTSTGG--LLPPPPGSGMSKISPP-------------PAPSQNSS 162
KK+GA G +A RPTS GG LLPPPPG S + PP PA S
Sbjct: 166 RKKEGAAGTPRA--RPTSAGGLSLLPPPPGGKSSTVIPPSGEQLSVGGSLVQPAVVSGSG 223
Query: 163 PIHQV--------NANANNWGDFTSAAPAPAPQPSRAADW 194
++ A A+ WGDFT + +P+ Q W
Sbjct: 224 GATELWPQSKPAAAATADIWGDFTKSTGSPSSQSQPGTGW 263
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA++W L +P W+GR+R+ K K +KLEDR SGELFAQ P+D +PG A+E+V+DSSRY
Sbjct: 31 RASEWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRY 90
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDL 307
FV+RI+D +GR+AFIGLGF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL
Sbjct: 91 FVIRIEDGNGRRAFIGLGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDL 150
Query: 308 KFKEGETIKINM 319
FK+G+TIKIN+
Sbjct: 151 GFKDGQTIKINI 162
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 329 GLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEEPKQ--ELDLKFKEGET 386
G GR+AFIGLGF DR D+FD NVALQDHFKW+K+ E K+ + P + +LDL FK+G+T
Sbjct: 98 GNGRRAFIGLGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDEGPKLDLGFKDGQT 157
Query: 387 IKINM 391
IKIN+
Sbjct: 158 IKINI 162
>sp|Q3T093|NECP1_BOVIN Adaptin ear-binding coat-associated protein 1 OS=Bos taurus
GN=NECAP1 PE=2 SV=1
Length = 275
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 143/226 (63%), Gaps = 39/226 (17%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRYFV+RI+D +GR AFI
Sbjct: 47 LRITSKGKVAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFI 106
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDLKFKEGETIKINM-KI 117
G+GFSDR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL FKEG+TIK+++ I
Sbjct: 107 GIGFSDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDSRPKLDLGFKEGQTIKLSIGNI 166
Query: 118 TKKDGADGQGKAKTRPTSTGGLLPPPPGSGMS------------KISPPPAPSQNS---- 161
T K G G K KT T LLPPPPG ++ ++PPP P N
Sbjct: 167 TTKKG--GTSKPKTAGTGGLSLLPPPPGGKVTIPPPSSSVAISNHVTPPPIPKSNHGGSD 224
Query: 162 ----------SPIHQ-----VNANANNWGDFTSAA---PAPAPQPS 189
+PI V+A+ + WGDF++A+ P APQPS
Sbjct: 225 ADILLDLDSPAPITTPAPAPVSASNDLWGDFSTASSSVPNQAPQPS 270
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 115/152 (75%), Gaps = 3/152 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA+DW L +P WTGR+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRY
Sbjct: 32 RASDWKLDQPDWTGRLRITSKGKVAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRY 91
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDL 307
FV+RI+D +GR AFIG+GFSDR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL
Sbjct: 92 FVIRIQDGTGRSAFIGIGFSDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDSRPKLDL 151
Query: 308 KFKEGETIKINMKITVSTYTLGLGRQAFIGLG 339
FKEG+TIK+++ ++T G + G G
Sbjct: 152 GFKEGQTIKLSIG-NITTKKGGTSKPKTAGTG 182
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 313 ETIKINMKITVSTYTLGLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE 372
ET+ + + V G GR AFIG+GFSDR D+FD NV+LQDHFKW+K+ EI KE +E
Sbjct: 83 ETVTDSSRYFVIRIQDGTGRSAFIGIGFSDRGDAFDFNVSLQDHFKWVKQESEISKESQE 142
Query: 373 --PKQELDLKFKEGETIKINM 391
+ +LDL FKEG+TIK+++
Sbjct: 143 MDSRPKLDLGFKEGQTIKLSI 163
>sp|Q5R630|NECP1_PONAB Adaptin ear-binding coat-associated protein 1 OS=Pongo abelii
GN=NECAP1 PE=2 SV=1
Length = 275
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 145/228 (63%), Gaps = 43/228 (18%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRYFV+RI+D +GR AFI
Sbjct: 47 LRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFI 106
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDLKFKEGETIKINM-KI 117
G+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL FKEG+TIK+++ I
Sbjct: 107 GIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIKLSIGNI 166
Query: 118 TKKDGADGQGKAKTRPTSTGGL--LPPPPGSGMS------------KISPPPAPSQNS-- 161
T K+G G +K R GGL LPPPPG ++ ++PPP P N
Sbjct: 167 TNKEG----GASKPRTARGGGLSLLPPPPGGKVTIPPPSSSVAISNHVTPPPIPKSNHGG 222
Query: 162 ------------SPIHQ-----VNANANNWGDFTSAA---PAPAPQPS 189
+P+ V+A+ + WGDF++A+ P APQPS
Sbjct: 223 SDADILLDLDSPAPVTTPAPTPVSASNDLWGDFSTASSSVPNQAPQPS 270
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA+DW L +P WTGR+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRY
Sbjct: 32 RASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRY 91
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDL 307
FV+RI+D +GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL
Sbjct: 92 FVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDL 151
Query: 308 KFKEGETIKINM 319
FKEG+TIK+++
Sbjct: 152 GFKEGQTIKLSI 163
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 313 ETIKINMKITVSTYTLGLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE 372
ET+ + + V G GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E
Sbjct: 83 ETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQE 142
Query: 373 --PKQELDLKFKEGETIKINM 391
+ +LDL FKEG+TIK+++
Sbjct: 143 MDARPKLDLGFKEGQTIKLSI 163
>sp|Q9CR95|NECP1_MOUSE Adaptin ear-binding coat-associated protein 1 OS=Mus musculus
GN=Necap1 PE=1 SV=2
Length = 275
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 145/228 (63%), Gaps = 43/228 (18%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRYFV+RI+D +GR AFI
Sbjct: 47 LRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFI 106
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDLKFKEGETIKINM-KI 117
G+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL FKEG+TIK+++ I
Sbjct: 107 GIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDNRPKLDLGFKEGQTIKLSIGNI 166
Query: 118 TKKDGADGQGKAKTRPTSTGGL--LPPPPGSGMS------------KISPPPAPSQNS-- 161
T K G G +K R + TGGL LPPPPG ++ ++PPP P N
Sbjct: 167 TAKKG----GASKPRASGTGGLSLLPPPPGGKVTIPPPSSSVAISNHVTPPPIPKSNHGG 222
Query: 162 ------------SPIHQ-----VNANANNWGDFTSAA---PAPAPQPS 189
+P+ V+ + + WGDF++A+ P APQPS
Sbjct: 223 NDSDILLDLDSPAPVSTSAPAPVSTSNDLWGDFSTASSSVPNQAPQPS 270
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA+DW L +P WTGR+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRY
Sbjct: 32 RASDWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRY 91
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDL 307
FV+RI+D +GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL
Sbjct: 92 FVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDNRPKLDL 151
Query: 308 KFKEGETIKINM 319
FKEG+TIK+++
Sbjct: 152 GFKEGQTIKLSI 163
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 313 ETIKINMKITVSTYTLGLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE 372
ET+ + + V G GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E
Sbjct: 83 ETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQE 142
Query: 373 --PKQELDLKFKEGETIKINM 391
+ +LDL FKEG+TIK+++
Sbjct: 143 MDNRPKLDLGFKEGQTIKLSI 163
>sp|Q8NC96|NECP1_HUMAN Adaptin ear-binding coat-associated protein 1 OS=Homo sapiens
GN=NECAP1 PE=1 SV=2
Length = 275
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 142/228 (62%), Gaps = 43/228 (18%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRYFV+RI+D +GR AFI
Sbjct: 47 LRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFI 106
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDLKFKEGETIKINM-KI 117
G+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL FKEG+TIK+ + I
Sbjct: 107 GIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIKLCIGNI 166
Query: 118 TKKDGADGQGKAKTRPTSTGGL--LPPPPGSGMS------------KISPPPAPSQNS-- 161
T K G G +K R GGL LPPPPG ++ ++PPP P N
Sbjct: 167 TNKKG----GASKPRTARGGGLSLLPPPPGGKVTIPPPSSSVAISNHVTPPPIPKSNHGG 222
Query: 162 ------------SPIHQ-----VNANANNWGDFTSAA---PAPAPQPS 189
+P+ V+ + + WGDF++A+ P APQPS
Sbjct: 223 SDADILLDLDSPAPVTTPAPTPVSVSNDLWGDFSTASSSVPNQAPQPS 270
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 107/132 (81%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA+DW L +P WTGR+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRY
Sbjct: 32 RASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRY 91
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDL 307
FV+RI+D +GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL
Sbjct: 92 FVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDL 151
Query: 308 KFKEGETIKINM 319
FKEG+TIK+ +
Sbjct: 152 GFKEGQTIKLCI 163
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 313 ETIKINMKITVSTYTLGLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE 372
ET+ + + V G GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E
Sbjct: 83 ETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQE 142
Query: 373 --PKQELDLKFKEGETIKINM 391
+ +LDL FKEG+TIK+ +
Sbjct: 143 MDARPKLDLGFKEGQTIKLCI 163
>sp|P69682|NECP1_RAT Adaptin ear-binding coat-associated protein 1 OS=Rattus norvegicus
GN=Necap1 PE=1 SV=1
Length = 277
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 144/232 (62%), Gaps = 49/232 (21%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRYFVLRIKDDSGRQAFI 60
+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRYFV+RI+D +GR AFI
Sbjct: 47 LRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVADSSRYFVIRIQDGTGRSAFI 106
Query: 61 GLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDLKFKEGETIKINM-KI 117
G+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL FKEG+TIK+++ I
Sbjct: 107 GIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDSRPKLDLGFKEGQTIKLSIGNI 166
Query: 118 TKKDGADGQGKAKTRPTSTGG--LLPPPPGSGMSKISPPPAPSQNSS------PIHQVNA 169
T K G G +K R + TGG LLPPPPG ++ PPP+ S S PI + N
Sbjct: 167 TAKKG----GTSKPRASGTGGLSLLPPPPGGKVTI--PPPSSSVAISNHVTPPPIPKSNH 220
Query: 170 NANN-----------------------------WGDFTSAA---PAPAPQPS 189
+N+ WGDF++A+ P APQPS
Sbjct: 221 GSNDSDILLDLDSPAPVPTSAPAPAPASTSNDLWGDFSTASSSVPNQAPQPS 272
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGVAIETVSDSSRY 249
RA+DW L +P WTGR+R+ +K K +KLED+ SGELFAQ P++ YPG+A+ETV+DSSRY
Sbjct: 32 RASDWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVADSSRY 91
Query: 250 FVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE--PKQELDL 307
FV+RI+D +GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E + +LDL
Sbjct: 92 FVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDSRPKLDL 151
Query: 308 KFKEGETIKINM 319
FKEG+TIK+++
Sbjct: 152 GFKEGQTIKLSI 163
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 313 ETIKINMKITVSTYTLGLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEKEKEE 372
ET+ + + V G GR AFIG+GF+DR D+FD NV+LQDHFKW+K+ EI KE +E
Sbjct: 83 ETVADSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQE 142
Query: 373 --PKQELDLKFKEGETIKINM 391
+ +LDL FKEG+TIK+++
Sbjct: 143 MDSRPKLDLGFKEGQTIKLSI 163
>sp|Q681Q7|Y1390_ARATH Uncharacterized protein At1g03900 OS=Arabidopsis thaliana
GN=At1g03900 PE=2 SV=1
Length = 272
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
Query: 190 RAADWNLQEPQWTGRMRLVTKDKECILKLEDRNSGELFAQCPIDTYPGV---AIETVSDS 246
+ +W + W+GR+R+V+ C ++LED NSG+LFA C +D PG ++E DS
Sbjct: 37 KCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDSNSGDLFAACFVD--PGRRENSVEPSLDS 94
Query: 247 SRYFVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEK-EKEEPKQEL 305
SRYFVLRI D G+ AFIGLGF++R+++FD NVAL DH K++++ +E E E E +
Sbjct: 95 SRYFVLRIDDGRGKYAFIGLGFAERNEAFDFNVALSDHEKYVRREKEKETGETSESDNHI 154
Query: 306 DL------KFKEGETIKINMKITVSTYTLGLGRQAFIGLG 339
D+ + KEGETI+IN+K +T G+ A G G
Sbjct: 155 DIHPAVNHRLKEGETIRINVKPKPTTNGTGMLSAALSGTG 194
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 14/147 (9%)
Query: 1 MRLVTKDKECILKLEDRNSGELFAQCPIDTYPGV---AIETVSDSSRYFVLRIKDDSGRQ 57
+R+V+ C ++LED NSG+LFA C +D PG ++E DSSRYFVLRI D G+
Sbjct: 52 LRVVSCKDRCEIRLEDSNSGDLFAACFVD--PGRRENSVEPSLDSSRYFVLRIDDGRGKY 109
Query: 58 AFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEK-EKEEPKQELDL------KFKEGET 110
AFIGLGF++R+++FD NVAL DH K++++ +E E E E +D+ + KEGET
Sbjct: 110 AFIGLGFAERNEAFDFNVALSDHEKYVRREKEKETGETSESDNHIDIHPAVNHRLKEGET 169
Query: 111 IKINMKITKKDGADGQGKAKTRPTSTG 137
I+IN+K K +G G + TG
Sbjct: 170 IRINVK--PKPTTNGTGMLSAALSGTG 194
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 329 GLGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKKTEEIEK-EKEEPKQELDL------KF 381
G G+ AFIGLGF++R+++FD NVAL DH K++++ +E E E E +D+ +
Sbjct: 105 GRGKYAFIGLGFAERNEAFDFNVALSDHEKYVRREKEKETGETSESDNHIDIHPAVNHRL 164
Query: 382 KEGETIKINMK 392
KEGETI+IN+K
Sbjct: 165 KEGETIRINVK 175
>sp|A2T308|YCF2_ANGEV Protein ycf2 OS=Angiopteris evecta GN=ycf2 PE=3 SV=1
Length = 2381
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 233 DTYPGVAIET--VSDSSRYFVLRIKDDSGRQAFIGLGFSDRSDSFDLNVALQDHFKWLKK 290
+T+P V + T + DS+R +++R ++ ++ L F ++++ D ++ D F
Sbjct: 1358 ETFPEVLLNTNDLLDSNRSYIIRYINNLLTSLWLELKFRSKNENVDYLISKSDSF----L 1413
Query: 291 TEEIEKEKEEP--KQELDLKFKEGETIKINMKITVSTYTLGLGRQAF-IGLGFSDRS 344
+EI +K +P K L L+F G ++ + + + + G+ R LGF+ S
Sbjct: 1414 VKEISNQKNKPFFKWSL-LRFVNGHNVEFSAIVLLLIFIYGISRHYLPTLLGFNSIS 1469
>sp|Q5ZJ00|EM55_CHICK 55 kDa erythrocyte membrane protein OS=Gallus gallus GN=MPP1 PE=2
SV=1
Length = 468
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 97 PKQELDLKFKEGETIKINMKITKKDGADGQGKAKTRPTSTGGLLPPP 143
P +E LKF+ G+ I+I I K D QG+ + T + GL+P P
Sbjct: 180 PCKEAGLKFQTGDVIQI---INKDDSNWWQGRVEGSGTESAGLIPSP 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,225,106
Number of Sequences: 539616
Number of extensions: 7223708
Number of successful extensions: 36215
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 35015
Number of HSP's gapped (non-prelim): 1243
length of query: 393
length of database: 191,569,459
effective HSP length: 119
effective length of query: 274
effective length of database: 127,355,155
effective search space: 34895312470
effective search space used: 34895312470
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)