Diaphorina citri psyllid: psy17974

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580---
MAKTAEKPQAFSTATSPDFLPAFQTNNAHLESILKSLESYLDVKRSAFPRFYFLSNEELLEILGQARNPQAVQPHLGKCFDGIAGWTPYVKSWLNLLFDKVPLIREEFEEVILALFEKYVDPGLNFVRKFCATAIHQMINLVPSCAAFITMNPGYAGRTELPDNLKALFRPMAMMVPDYGLIAEVVLYSEGFESSKNLAQKMVNMYKLCSEQLSQQDHYDFGMRAVKSVLVMAGSLKRANPDKNEDVVLIRALRDSNLPKFLADDAGLFLVDVSKARMICSLMESTLIEPGMLDRSHNSENTGPLLVQTFLWSYLWAVGGNLTDESRDRFEAFAREQFTDEPNVSLGKDPDLRSYFVSKDTKQLTPWTTITPIFTYDPTMPFFDMMVPTIDTIRFGSIMEKLLLVNHPVMFTGVTGVGKTVVARSILNKLLASNTWAALTINFSAQTSSARTQEILEGKLDKRTKTLLGAPLGKRLAVFVDDVNMPKLETYGAQPPIELLRQFLDFGGLYDRDKMFWKTLQDVVLCTACAPPGGGRMPLTPRFVRHFGLLSLPSPTEDTLKVIFKVRTSPGKQEGTSSILAEA
cccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHccccccccccccHHHHHHHHHccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEcccEEEEEECccccccccccccccccccccCEEEcccccHHHHHHHHccccHHHHHHHHHHEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccEEEccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccEEEEECcccccccccccccccccccccccccEEECccHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccccccccccccHHHHHHHHHccccccccccccEEEcccEEEEcccccccccccccHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHcccccccccc
*****EKPQAFSTATSPDFLPAFQTNNAHLESILKSLESYLDVKRSAFPRFYFLSNEELLEILGQARNPQAVQPHLGKCFDGIAGWTPYVKSWLNLLFDKVPLIREEFEEVILALFEKYVDPGLNFVRKFCATAIHQMINLVPSCAAFITMNPGYAGRTELPDNLKALFRPMAMMVPDYGLIAEVVLYSEGFESSKNLAQKMVNMYKLCSEQLSQQDHYDFGMRAVKSVLVMAGSLKRANPDKNEDVVLIRALRDSNLPKFLADDAGLFLVDVSKARMICSLMESTLIEPGMLDRSHNSENTGPLLVQTFLWSYLWAVGGNLTDESRDRFEAFAREQFTDEPNVSLGKDPDLRSYFVSKDTKQLTPWTTITPIFTYDPTMPFFDMMVPTIDTIRFGSIMEKLLLVNHPVMFTGVTGVGKTVVARSILNKLLASNTWAALTINFSAQTSSARTQEILEGKLDKRTKTLLGAPLGKRLAVFVDDVNMPKLETYGAQPPIELLRQFLDFGGLYDRDKMFWKTLQDVVLCTACAPPGGGRMPLTPRFVRHFGLLSLPSPTEDTLKVIFKVRTSPGKQEGTSS*****
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MAKTAEKPQAFSTATSPDFLPAFQTNNAHLESILKSLESYLDVKRSAFPRFYFLSNEELLEILGQARNPQAVQPHLGKCFDGIAGWTPYVKSWLNLLFDKVPLIREEFEEVILALFEKYVDPGLNFVRKFCATAIHQMINLVPSCAAFITMNPGYAGRTELPDNLKALFRPMAMMVPDYGLIAEVVLYSEGFESSKNLAQKMVNMYKLCSEQLSQQDHYDFGMRAVKSVLVMAGSLKRANPDKNEDVVLIRALRDSNLPKFLADDAGLFLVDVSKARMICSLMESTLIEPGMLDRSHNSENTGPLLVQTFLWSYLWAVGGNLTDESRDRFEAFAREQFTDEPNVSLGKDPDLRSYFVSKDTKQLTPWTTITPIFTYDPTMPFFDMMVPTIDTIRFGSIMEKLLLVNHPVMFTGVTGVGKTVVARSILNKLLASNTWAALTINFSAQTSSARTQEILEGKLDKRTKTLLGAPLGKRLAVFVDDVNMPKLETYGAQPPIELLRQFLDFGGLYDRDKMFWKTLQDVVLCTACAPPGGGRMPLTPRFVRHFGLLSLPSPTEDTLKVIFKVRTSPGKQEGTSSILAEA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dynein heavy chain 6, axonemal Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.confidentQ9C0G6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042995 [CC]cell projectionprobableGO:0005575, GO:0044464, GO:0005623
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VKG, chain A
Confidence level:very confident
Coverage over the Query: 384-461,472-564
View the alignment between query and template
View the model in PyMOL
Template: 4AI6, chain A
Confidence level:confident
Coverage over the Query: 127-275
View the alignment between query and template
View the model in PyMOL
Template: 3CF0, chain A
Confidence level:confident
Coverage over the Query: 404-571
View the alignment between query and template
View the model in PyMOL
Template: 3VKH, chain A
Confidence level:confident
Coverage over the Query: 139-273
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3vkg, chain A very confident Alignment | Template Structure