BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17980
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 128 TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
T P P+ L F SGGR LI+LGD+ +DYD FR Y+TTK+PNPHYLPE CI++
Sbjct: 3130 TLDPALEPILLKQIFI--SGGRLLIRLGDSDIDYDKNFRFYMTTKMPNPHYLPEVCIKVT 3187
Query: 188 LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
+INFTVT SGLE+QL++DVVRLE+P LE++R ++IV +N DK+ LK IE+ ILR+LFTSE
Sbjct: 3188 IINFTVTKSGLEDQLLSDVVRLEKPRLEEQRIKLIVRINTDKNQLKTIEEKILRMLFTSE 3247
Query: 248 GEIL 251
G IL
Sbjct: 3248 GNIL 3251
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ES +GLKI+KLTDS ++R +E +RLGLPVLLE++ ETLDPAL PILLKQ + G
Sbjct: 3093 ESKSGLKIIKLTDSNFLRILENSIRLGLPVLLEELKETLDPALEPILLKQIFISG 3147
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 78/106 (73%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+NF +T G+++QL+
Sbjct: 3058 QGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGI 3117
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
VV ERPDLE+E+ +I+ ++K LKEIED IL +L +SEG IL
Sbjct: 3118 VVAQERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNIL 3163
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ME N L ++KL++ Y+RT+E C++ G PVLLE+VGE LDP L P+LLKQT+ +G
Sbjct: 3004 MEKANSLYVIKLSEPDYVRTLENCIQFGTPVLLENVGEELDPILEPLLLKQTFKQG 3059
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 78/106 (73%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+NF +T G+++QL+
Sbjct: 3091 QGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGI 3150
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
VV ERPDLE+E+ +I+ ++K LKEIED IL +L +SEG IL
Sbjct: 3151 VVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNIL 3196
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ME N L+++KL+D Y+RT+E C++ G PVLLE+VGE LDP L P+LLKQT+ +G
Sbjct: 3037 MEKTNSLQLIKLSDPDYVRTLENCIQFGTPVLLENVGEELDPILEPLLLKQTFKQG 3092
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 76/101 (75%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
G T++KLGDTV+ Y FR+Y+TTKLPNPHY PE ++ LINFT++ SGLE+QL+ VV
Sbjct: 3368 GNTVLKLGDTVIPYHEDFRMYITTKLPNPHYTPEISTKLTLINFTLSPSGLEDQLLGQVV 3427
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEG 248
ERPDLE+ +NQ+I++ K + LK+IED IL L +SEG
Sbjct: 3428 AEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEG 3468
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTK 55
ME NGL + KL+D ++R+ME +R G P LLE+VGE LDPAL P+LLKQTY +
Sbjct: 3312 MEKDNGLDVFKLSDRDFLRSMENAIRFGKPCLLENVGEELDPALEPVLLKQTYKQ 3366
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 76/101 (75%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
G T++KLGDTV+ Y FR+Y+TTKLPNPHY PE ++ LINFT++ SGLE+QL+ VV
Sbjct: 3554 GNTVLKLGDTVIPYHEDFRMYITTKLPNPHYSPEVSTKLTLINFTLSPSGLEDQLLGQVV 3613
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEG 248
ERPDLE+ +NQ+I++ K + LK+IED IL L +SEG
Sbjct: 3614 AEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEG 3654
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTK 55
ME +GL + KL+D ++R+ME +R G P LLE+VGE LDPAL P+LLKQTY +
Sbjct: 3498 MEKESGLDVFKLSDRDFLRSMENAIRFGKPCLLENVGEELDPALEPVLLKQTYKQ 3552
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 74/105 (70%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GGR LI++GD V+Y+P FR YLTTKL NPHY PET + ++NF V GLE QL+ V
Sbjct: 3492 GGRMLIRIGDKEVEYNPNFRFYLTTKLSNPHYNPETSAKTTIVNFAVKEQGLEAQLLGIV 3551
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
VR ERP+LE++++ +++ + K LKE+ED ILRLL + G +L
Sbjct: 3552 VRKERPELEEQKDSLVINIAAGKRKLKELEDEILRLLNEATGSLL 3596
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ME GLKI+ L Y+R +E ++ G PVLL++V E LDP L P+L K G
Sbjct: 3437 MEGNQGLKIIDLQMHDYLRVLEHAIQFGFPVLLQNVQEYLDPTLNPVLNKSVARIG 3492
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GGR L+++GD V+Y+ FR Y+TTKL NPHY PET + ++NF V GLE QL+ V
Sbjct: 3463 GGRLLMRIGDKEVEYNTNFRFYITTKLSNPHYSPETSAKTTIVNFAVKEQGLEAQLLGIV 3522
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
VR ERP+LE++++ +++ + K LKE+ED ILRLL + G +L
Sbjct: 3523 VRKERPELEEQKDSLVINIAAGKRKLKELEDEILRLLNEATGSLL 3567
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ME GLKI+ L S Y+R +E + G PVLL++V E LDP L P+L K G
Sbjct: 3408 MEGGQGLKIIDLQMSDYLRILEHAIHFGYPVLLQNVQEYLDPTLNPMLNKSVARIG 3463
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G +TLIKLGD VDY+ FRLYLTTKL NP Y PE ++ ++NF V GLE QL+A V
Sbjct: 3549 GNQTLIKLGDKEVDYNFDFRLYLTTKLANPLYTPEISTKVMIVNFAVKEQGLEAQLLATV 3608
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V+ ERPDL++++N ++V + K E+ED IL LL T+ G +L
Sbjct: 3609 VKNERPDLDKQKNDLVVKVAAGKRTQAELEDTILHLLSTATGSLL 3653
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MESPNG-LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
ME G LK+L L S R +E ++ G PVL++D+ + +DP L P+L K +G
Sbjct: 3493 MEGRGGRLKVLNLQMSDMARQIENAIQFGQPVLMQDILQEIDPILEPVLAKSFIKRG 3549
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%)
Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
IK+GD V+Y+P+FRL L TKL NPHY PE Q LINFTVT GLE+QL+A+VV ER
Sbjct: 3516 IKIGDKEVEYNPEFRLILQTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLANVVAQER 3575
Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
PDLE+ ++ + N K +LKE+EDN+L L ++EG L
Sbjct: 3576 PDLEKLKSDLTKQQNDFKIILKELEDNLLSRLSSAEGNFLG 3616
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 5 NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
+ L+++++ Y+ T+E + G VL+E++ E++DP L P+L + T KG+
Sbjct: 3462 DELRVIRIGQRGYLDTIENAISSGDTVLIENMEESIDPVLDPVLGRNTIKKGR 3514
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 70/101 (69%)
Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
IK+GD V+Y+P FRL L TKL NPHY PE Q LINFTVT GLE+QL+A+VV ER
Sbjct: 3516 IKIGDKEVEYNPDFRLILQTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLANVVAQER 3575
Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
PDLE+ ++ + N K +LKE+EDN+L L ++EG L
Sbjct: 3576 PDLEKLKSDLTKQQNDFKIILKELEDNLLSRLSSAEGNFLG 3616
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 5 NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
+ L+++++ Y+ T+E + G VL+E++ E++DP L P+L + T KG+
Sbjct: 3462 DDLRVIRIGQRGYLDTIENAISSGDTVLIENMEESIDPVLDPVLGRNTIKKGR 3514
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA11 PE=3 SV=2
Length = 4499
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 148 GRTL-IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GR+L +KLGD +Y+ FRL+L TKL NPHY PE + LINFTVT +GLE+QL+A V
Sbjct: 3425 GRSLYVKLGDKECEYNKNFRLFLHTKLSNPHYPPEIQAETTLINFTVTEAGLEDQLLALV 3484
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
V ERPDLE+ + Q+I+ + LKE+ED +L L T+EG+I
Sbjct: 3485 VNKERPDLEETKTQLIIQNTEFTIKLKELEDGLLLKLSTAEGDI 3528
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKT 58
ES N L++ ++ S ++ ME + G VL+E++GET+D L PI+ + T+ KG++
Sbjct: 3371 ESKNNLQVTRMGASNMLQVMERAIEAGHSVLVENMGETIDAVLNPIITRSTFKKGRS 3427
>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1
Length = 4625
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 72/107 (67%)
Query: 145 PSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMA 204
P G+ +IKLGD V++D FRLY+T+KL NPHY PE + +IN+ VT GL EQL+
Sbjct: 3646 PGDGKFVIKLGDKEVEWDSNFRLYMTSKLSNPHYGPEISGKTMIINYGVTQQGLTEQLLN 3705
Query: 205 DVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+R ER DLE+ R +I M+++K+ L+ +ED +LR L ++G IL
Sbjct: 3706 VTLRHERSDLEEAREALIKQMSENKATLQALEDTLLRELSNAQGNIL 3752
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 8 KILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLK 50
K+ DS +++ +E ++ G P L E++ E +DP + P+L K
Sbjct: 3600 KVKTFNDSDFLKQLELSIQYGFPFLFENLDEYIDPVIDPVLEK 3642
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%)
Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
IK+GD V+Y PKFRL L TK NPHY PE Q LINF VT GLE+QL+A VV ER
Sbjct: 3498 IKIGDKEVEYHPKFRLILHTKYFNPHYKPEMQAQCTLINFLVTRDGLEDQLLAAVVAKER 3557
Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
PDLEQ + + + N+ K +LKE+ED++L L + G L
Sbjct: 3558 PDLEQLKANLTKSQNEFKIVLKELEDSLLARLSAASGNFLG 3598
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
LK ++L +Y+ +E + G +L+E++GET+DP L P+L + T KGK
Sbjct: 3446 LKAIRLGQKSYLDVIEQAISEGDTLLIENIGETVDPVLDPLLGRNTIKKGK 3496
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 148 GRTLI-KLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GR +I K+GD V YD +FRLYL TKL NPH+ PE Q L+NF VT GLE+QL+A V
Sbjct: 3586 GRNIIMKIGDAEVQYDSRFRLYLQTKLSNPHFKPEVAAQTTLVNFCVTEKGLEDQLLALV 3645
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V ERPDL+++ ++ ++N+ L E+E+N+L L + G IL
Sbjct: 3646 VDHERPDLQEQAAGLVRSLNEYNITLVELENNLLFNLANATGNIL 3690
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKT 58
E+ NGL I++ + Y+ + C+ G P+L+E++ +D L P++ K T KG+
Sbjct: 3532 ETNNGLVIIQQSQPKYIDQVINCIENGWPLLIENLPVDIDAVLDPVIGKMTIKKGRN 3588
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
GR IK+GD V+Y P FRL L TK NPHY PE Q LINF VT GLE+QL+A VV
Sbjct: 3493 GR-FIKIGDKEVEYHPSFRLILHTKYFNPHYKPEMQAQCTLINFLVTRDGLEDQLLAAVV 3551
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
ERPDLEQ + + + N+ K +LKE+ED++L L + G L
Sbjct: 3552 AKERPDLEQLKANLTKSQNEFKIVLKELEDSLLARLSAASGNFLG 3596
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
L+ ++L +Y+ +E + G +L+E++GET+DP L P+L + T KG+
Sbjct: 3444 LQAIRLGQKSYLDIIEQAISAGDTLLIENIGETVDPVLDPLLGRNTIKKGR 3494
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
GR IK+GD +Y+PKFRL L TKL NPHY PE Q LINFTVT GLE+QL+A VV
Sbjct: 3533 GR-FIKIGDKECEYNPKFRLILHTKLANPHYQPELQAQATLINFTVTRDGLEDQLLAAVV 3591
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIED 237
+ERPDLEQ ++ + N K LK +ED
Sbjct: 3592 SMERPDLEQLKSDLTKQQNGFKITLKTLED 3621
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
L++ ++ Y++ +E + G VL+E++ E++DP LGP+L ++ KG+
Sbjct: 3484 LRVTQIGQKGYLQIIEQALEAGAVVLIENLEESIDPVLGPLLGREVIKKGR 3534
>sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ro-1 PE=3 SV=1
Length = 4367
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 126 LCTSGPHSPPM--NLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETC 183
L H P+ ++ N Y +GGR LI+LG +D+ P F+LYL+T+ P+ + P+ C
Sbjct: 3646 LIQDAEHLDPVLNHVLNKEYQKTGGRVLIQLGKQQIDFSPAFKLYLSTRDPSATFAPDIC 3705
Query: 184 IQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLL 243
+ +NFTVT S L+ Q + +V++ ERPD+++ R+ +I + K L+++E +L+ L
Sbjct: 3706 SRTTFVNFTVTQSSLQTQSLNEVLKSERPDVDERRSNLIKLQGEFKVHLRQLEKKLLQAL 3765
Query: 244 FTSEGEIL 251
S G IL
Sbjct: 3766 NESRGNIL 3773
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
L + D ++ + +E+ +R G P+L++D E LDP L +L K+ G
Sbjct: 3621 LTVTSFLDDSFTKVLESSLRFGNPILIQD-AEHLDPVLNHVLNKEYQKTG 3669
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 71/109 (65%)
Query: 143 YPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQL 202
+ +G +K+GD VD FRLY+TTKLPNP Y PE + +I+FTVT GLE+QL
Sbjct: 3668 FIKTGSTFKVKVGDKEVDVLDGFRLYITTKLPNPAYTPEISARTSIIDFTVTMKGLEDQL 3727
Query: 203 MADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+ V+ E+ +LE+ER ++ + +K +KE+EDN+L L +++G ++
Sbjct: 3728 LGRVILTEKQELEKERTHLMEDVTANKRRMKELEDNLLYRLTSTQGSLV 3776
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRR 61
ES N L+I L + +E + LG P+L+EDVGE LDPAL +L + G T +
Sbjct: 3618 ESRNELQITSLNHKYFRNHLEDSLSLGRPLLIEDVGEELDPALDNVLERNFIKTGSTFKV 3677
Query: 62 SYADQ 66
D+
Sbjct: 3678 KVGDK 3682
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 75/104 (72%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
G ++LG+ +++Y F+LY+TT+L NPHYLPE +++ L+NF +T GL++QL+ V
Sbjct: 3151 GVEYMRLGENIIEYSRDFKLYITTRLRNPHYLPEVAVKVCLLNFMITPLGLQDQLLGIVA 3210
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
E+P+LE+++NQ+IV K+K LKEIED IL +L S+G IL
Sbjct: 3211 AKEKPELEEKKNQLIVESAKNKKHLKEIEDKILEVLSMSKGNIL 3254
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTK 55
ME N L ++K +DS YMR +E ++LG PVL+E++GE LD ++ PILLK T+ +
Sbjct: 3095 MEKANKLAVIKFSDSNYMRMLENALQLGTPVLIENIGEELDASIEPILLKATFKQ 3149
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+G +K+GD VD F+LY+TTKLPNP Y PE + +I+FTVT GLE+QL+
Sbjct: 3668 TGSTFKVKVGDKEVDVMDGFKLYITTKLPNPAYTPEISARTSIIDFTVTVKGLEDQLLGR 3727
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V+ E+ +LE+ER ++ + +K +KE+EDN+L L +++G ++
Sbjct: 3728 VILTEKQELEKERTHLLEDVTANKRRMKELEDNLLYRLTSTQGSLV 3773
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRR 61
ES N L+I L + +E + LG P+L+EDVGE LDPAL +L K G T +
Sbjct: 3615 ESQNELQITSLNHKYFRNHLEDSLSLGRPLLIEDVGEELDPALDNVLEKNFIKTGSTFKV 3674
Query: 62 SYADQ 66
D+
Sbjct: 3675 KVGDK 3679
>sp|P78716|DYHC_FUSSO Dynein heavy chain, cytoplasmic OS=Fusarium solani subsp. pisi
GN=DHC1 PE=3 SV=1
Length = 4349
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 69/106 (65%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI+LG +D+ P F+LYL+T+ P+ + P+ C + +NFTVT S L+ Q + D
Sbjct: 3666 TGGRVLIQLGKQEIDFSPAFKLYLSTRDPSATFAPDICSRTTFVNFTVTQSSLQTQSLND 3725
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V++ ERPD+++ R+ +I + K L+++E +L+ L S G IL
Sbjct: 3726 VLKSERPDVDERRSNLIKLQGEFKIHLRQLEKRLLQALNESRGNIL 3771
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
L + D T+ + +E+ +R G P+L++D E LDP L +L K+ G
Sbjct: 3619 LTVTSFLDDTFTKQLESSLRFGNPILIQD-AEHLDPILNHVLNKECQRTG 3667
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%)
Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
I++GD +++ FRL L TKL NPHY PE Q L+NFTVT GLE QL+A+VV +ER
Sbjct: 3573 IRIGDKECEFNKNFRLILHTKLANPHYKPELQAQTTLLNFTVTEDGLEAQLLAEVVSIER 3632
Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
PDLE+ + + N K LK +ED++L L +EG L
Sbjct: 3633 PDLEKLKLVLTKHQNDFKIELKYLEDDLLLRLSAAEGSFL 3672
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPR 60
LK+ L ++ +E + G +L+E++ ET+DP L P+L + T KGK R
Sbjct: 3521 LKVTHLGQKGFLNAIETALAFGDVILIENLEETIDPVLDPLLGRNTIKKGKYIR 3574
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA2 PE=1 SV=1
Length = 4485
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 69/105 (65%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G ++ L D VD+ FRL+ TT+LPNPH+ PE ++ +++FTVT +GLE+QL+ +
Sbjct: 3517 GKTWVVPLADKEVDFTETFRLFCTTRLPNPHFTPELSAKVTVVDFTVTMAGLEDQLLGKL 3576
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+ E+ +LE +R Q++ + K +K++ED++L L S+G +L
Sbjct: 3577 ISKEKKELEDQRQQLLEEVQSYKKRIKQLEDDLLCRLSNSQGNLL 3621
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRR 61
E N LK +L D + +E C+ G P+L+E++ E LDP L P+L ++ KGKT
Sbjct: 3463 EEANQLKTTQLNDKLFRNHLEECLAFGRPLLIENIEEELDPLLDPVLERRLVKKGKTWVV 3522
Query: 62 SYADQ 66
AD+
Sbjct: 3523 PLADK 3527
>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
SV=4
Length = 4307
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 70/106 (66%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
G R ++++GD ++DY+ +FRL+L+T+ PNP P+ + +NFT T SGL QL+A
Sbjct: 3347 QGPRYVVQIGDKIIDYNEEFRLFLSTRNPNPFIPPDAASIVTEVNFTTTRSGLRGQLLAL 3406
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ E+PDLE+++ +++ K L ++E+++L L TS+G IL
Sbjct: 3407 TIQHEKPDLEEQKTKLLQQEEDKKIQLAKLEESLLETLATSQGNIL 3452
>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
PE=1 SV=1
Length = 4306
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 68/105 (64%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G R ++++GD ++DY+ FRL+L+T+ PNP P+ + +NFT T SGL QL+A
Sbjct: 3347 GPRYVVQIGDKIIDYNEDFRLFLSTRNPNPFIPPDAASIVTEVNFTTTRSGLRGQLLALT 3406
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ E+PDLE+++ +++ K L +E+++L L TS+G IL
Sbjct: 3407 IQHEKPDLEEQKTKLLQQEEDKKIQLARLEESLLETLATSQGNIL 3451
>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
SV=1
Length = 4306
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 68/106 (64%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
G R ++++GD ++DY+ FRL+L+T+ PNP P+ + +NFT T SGL QL+A
Sbjct: 3346 QGPRYVVQIGDKIIDYNEDFRLFLSTRNPNPFIPPDAASIVTEVNFTTTRSGLRGQLLAL 3405
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ E+PDLE+++ +++ K L +E+++L L TS+G IL
Sbjct: 3406 TIQHEKPDLEEQKTKLLQQEEDKKIQLARLEESLLETLATSQGNIL 3451
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4
Length = 4471
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
S GR I LGD VDYD FRLYL TKL NP Y P + +IN+TVT GLE+QL++
Sbjct: 3503 SQGRQFIILGDKEVDYDSNFRLYLNTKLANPRYSPSVFGKAMVINYTVTLKGLEDQLLSV 3562
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+V ER +LE++R +I +++K++LK++ED++LR L TS G +L
Sbjct: 3563 LVAYERRELEEQREHLIQETSENKNLLKDLEDSLLRELATSTGNML 3608
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLK 50
E N L++ D +++ +E ++ G P L DV E +DP + +L K
Sbjct: 3450 EEKNNLRVASFNDPDFLKQLEMSIKYGTPFLFRDVDEYIDPVIDNVLEK 3498
>sp|Q9SMH5|DYHC2_CHLRE Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii
GN=DHC1B PE=1 SV=2
Length = 4334
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G R ++++GD DY+ FRL+L T+ P+P+ P+ + + NFTVT SGLE QL+
Sbjct: 3367 GPRFVVQIGDKATDYNDTFRLFLVTRNPDPYLPPDARSLLAVTNFTVTRSGLEGQLLGLT 3426
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ ERP+LE++++ ++ ++ K L E+E N+L+ L TS G IL
Sbjct: 3427 LQKERPELEEQKSTMLRQEDECKVALAELERNLLQTLATSTGNIL 3471
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 74/104 (71%)
Query: 148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
G ++LG+ +++Y +F+ Y+TT+L NPHYLPE +++ L+NF +T GL++QL+ V
Sbjct: 3118 GVEYMRLGENIIEYSREFKFYITTRLRNPHYLPEVAVKVCLLNFMITPLGLQDQLLGIVA 3177
Query: 208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
E+P+LE+++N++I+ ++K LKEIED IL +L EG IL
Sbjct: 3178 AKEKPELEEKKNKLILESAQNKKQLKEIEDKILEVLSLCEGNIL 3221
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTK 55
ME N L ++K +D+ Y+RT+E ++ G PVLLE+VGE LD + PILLK T+ +
Sbjct: 3062 MEKTNKLSVIKFSDTNYVRTLENALQFGTPVLLENVGEELDAFIEPILLKATFKQ 3116
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%)
Query: 143 YPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQL 202
+ SG +K+GD D F+LY+TTKLPNP + PE + +I+FTVT GLE QL
Sbjct: 3774 FIKSGTAFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQL 3833
Query: 203 MADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+ V+ E+ +LE ER +++ + +K +KE+EDN+L L ++G ++
Sbjct: 3834 LRRVILTEKQELESERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLV 3882
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRR 61
E N L++ L + +E + LG P+L+ED+ E LDPAL +L K G +
Sbjct: 3724 EKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIREELDPALDNVLEKNFIKSGTAFKV 3783
Query: 62 SYADQ 66
D+
Sbjct: 3784 KVGDK 3788
>sp|P37276|DYHC_DROME Dynein heavy chain, cytoplasmic OS=Drosophila melanogaster GN=Dhc64C
PE=2 SV=2
Length = 4639
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 70/106 (66%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI LGD +D P F ++L+T+ P + P+ C ++ +NFTVT S L+ Q +
Sbjct: 3642 TGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDICSRVTFVNFTVTRSSLQSQCLNQ 3701
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V++ ERPD++++R+ ++ + + L+++E ++L+ L ++G+IL
Sbjct: 3702 VLKAERPDIDEKRSDLLKLQGEFRLRLRQLEKSLLQALNDAKGKIL 3747
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 GLKILKLT--DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
G KI K + D ++ + +E+ +R G P+L++DV E DP L P+L ++ G
Sbjct: 3592 GKKITKTSFLDDSFRKNLESALRFGNPLLVQDV-ENYDPILNPVLNRELRRTG 3643
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%)
Query: 143 YPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQL 202
+ SG +K+GD D F+LY+TTKLPNP + PE + +I+FTVT GLE QL
Sbjct: 3533 FIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQL 3592
Query: 203 MADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+ V+ E+ +LE ER +++ + +K +KE+EDN+L L ++G ++
Sbjct: 3593 LRRVILTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLV 3641
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 2 ESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRR 61
E N L++ L + +E + LG P+L+ED+ E LDPAL +L K G T +
Sbjct: 3483 EKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKV 3542
Query: 62 SYADQ 66
D+
Sbjct: 3543 KVGDK 3547
>sp|P34036|DYHC_DICDI Dynein heavy chain, cytoplasmic OS=Dictyostelium discoideum GN=dhcA
PE=1 SV=2
Length = 4730
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 65/105 (61%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GGR LI+LGD VD+ P F ++L T+ P H+ P+ C ++ +NFTVT S L+ Q + +
Sbjct: 3742 GGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEA 3801
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ ERPD ++R+ ++ + + L+ +E ++L L + G IL
Sbjct: 3802 LKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNIL 3846
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 14 DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
DS++M+ +E+ +R G P+L++DV E +DP L P+L K+ KG
Sbjct: 3701 DSSFMKNLESALRFGCPLLVQDV-ENIDPVLNPVLNKEIRKKG 3742
>sp|Q27802|DYHC2_TRIGR Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla GN=DYH1B
PE=2 SV=2
Length = 4318
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G R ++++GD V+DY FRL++TT+ PNP P+ I INFT T +GL QL+A
Sbjct: 3362 GPRFVVQIGDKVIDYHEDFRLFMTTRNPNPEIPPDAASIISEINFTTTRAGLTGQLLAAT 3421
Query: 207 VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ E+P+LE + +++ K L ++E+++L L +EG IL
Sbjct: 3422 IQHEKPELEVRKTELLKQEEDLKIQLAQLEESLLETLAKAEGNIL 3466
>sp|P38650|DYHC1_RAT Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus GN=Dync1h1
PE=1 SV=1
Length = 4644
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 69/106 (65%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI LGD +D P F ++L+T+ P + P+ C ++ +NFTVT S L+ Q + +
Sbjct: 3654 TGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDLCSRVTFVNFTVTRSSLQSQCLNE 3713
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V++ ERPD++++R+ ++ + + L+++E ++L+ L +G IL
Sbjct: 3714 VLKAERPDVDEKRSDLLKLQGEFQLRLRQLEKSLLQALNEVKGRIL 3759
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 14 DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
D + + +E+ +R G P+L++DV E+ DP L P+L ++ G
Sbjct: 3614 DDAFRKNLESALRFGNPLLVQDV-ESYDPVLNPVLNREVRRTG 3655
>sp|Q9JHU4|DYHC1_MOUSE Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus GN=Dync1h1 PE=1
SV=2
Length = 4644
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 69/106 (65%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI LGD +D P F ++L+T+ P + P+ C ++ +NFTVT S L+ Q + +
Sbjct: 3654 TGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDLCSRVTFVNFTVTRSSLQSQCLNE 3713
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V++ ERPD++++R+ ++ + + L+++E ++L+ L +G IL
Sbjct: 3714 VLKAERPDVDEKRSDLLKLQGEFQLRLRQLEKSLLQALNEVKGRIL 3759
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 14 DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
D + + +E+ +R G P+L++DV E+ DP L P+L ++ G
Sbjct: 3614 DDAFRKNLESALRFGNPLLVQDV-ESYDPVLNPVLNREVRRTG 3655
>sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1
SV=5
Length = 4646
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 69/106 (65%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI LGD +D P F ++L+T+ P + P+ C ++ +NFTVT S L+ Q + +
Sbjct: 3656 TGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDLCSRVTFVNFTVTRSSLQSQCLNE 3715
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V++ ERPD++++R+ ++ + + L+++E ++L+ L +G IL
Sbjct: 3716 VLKAERPDVDEKRSDLLKLQGEFQLRLRQLEKSLLQALNEVKGRIL 3761
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 14 DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
D + + +E+ +R G P+L++DV E+ DP L P+L ++ G
Sbjct: 3616 DDAFRKNLESALRFGNPLLVQDV-ESYDPVLNPVLNREVRRTG 3657
>sp|Q19020|DYHC_CAEEL Dynein heavy chain, cytoplasmic OS=Caenorhabditis elegans GN=dhc-1
PE=3 SV=1
Length = 4568
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 65/106 (61%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI +GD +D P F++++ T+ + P+ C ++ +NFTVTSS L Q +
Sbjct: 3599 AGGRVLITIGDQDIDLSPSFQIFMITRDSTVEFSPDICSRVTFVNFTVTSSSLASQCLNQ 3658
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
V+R ERPD++++RN ++ + L+ +E +L L S+G+IL
Sbjct: 3659 VLRSERPDVDKKRNDLLKLQGEFAVRLRHLEKALLAALNESKGKIL 3704
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 14 DSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
D ++ + +E+ +R G +L++DV E DP L P+L ++ G
Sbjct: 3559 DESFRKNLESALRFGNSLLVQDV-EAYDPILNPVLNREVKRAG 3600
>sp|Q27171|DYHC_PARTE Dynein heavy chain, cytoplasmic OS=Paramecium tetraurelia GN=DHC-8
PE=2 SV=1
Length = 4540
Score = 75.1 bits (183), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 146 SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
+GGR LI++G+ +D+ F +++ T+ + P+ C ++ +NFTVT S L+EQ +
Sbjct: 3547 TGGRVLIRVGNQEIDFSQGFTMFMITRDSTARFTPDLCSRVTFVNFTVTQSSLQEQCLNI 3606
Query: 206 VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
+R E P+ E++R ++ + L+E+ED +L L S G IL
Sbjct: 3607 FLRNESPETEEKRLNLMKLQGEYIVKLRELEDQLLDSLNNSRGSIL 3652
Score = 47.4 bits (111), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 12 LTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
TD ++++T+E C+R G P+L++DV E +DP L +L +TY G
Sbjct: 3505 FTDESFLKTLETCLRFGCPLLVQDV-EKVDPILNSVLNNETYKTG 3548
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 126 LCTSGPHSPPM--NLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETC 183
L H P+ ++ N Y +GGR LI+LG +D+ P F+L+L+T+ P+ + P+ C
Sbjct: 3633 LIQDAEHLDPILNHVLNKEYQKTGGRVLIQLGKQEIDFSPSFKLFLSTRDPSATFAPDVC 3692
Query: 184 IQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLL 243
+ +NFT+T S L+ Q + +V++ ER D+++ R+ ++ + L+++E +L+ L
Sbjct: 3693 SRTTFVNFTITQSSLQIQSLNEVLKSERDDVDRRRSDLVKAQGEFNVHLRQLEKRLLQAL 3752
Query: 244 FTSEGEIL 251
S G IL
Sbjct: 3753 NESHGNIL 3760
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 3 SPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKG 56
S L + D ++++ +E+ +R G P+L++D E LDP L +L K+ G
Sbjct: 3604 SDRKLTVTSFLDDSFVKQLESALRFGNPILIQD-AEHLDPILNHVLNKEYQKTG 3656
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 59/86 (68%)
Query: 166 RLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTM 225
+LYL+T++ NPH+LP + +INFTVT GL++QL++ VV E P LE +R++++ ++
Sbjct: 2582 KLYLSTEIDNPHFLPSVYNFVTMINFTVTFQGLQDQLLSTVVTHEVPHLEDQRSKLLESI 2641
Query: 226 NKDKSMLKEIEDNILRLLFTSEGEIL 251
+ D L+E+E+ L LL + G IL
Sbjct: 2642 SLDAITLEELEEKTLNLLQKALGSIL 2667
>sp|Q8IBG1|DYHC1_PLAF7 Dynein heavy chain-like protein MAL7P1.162 OS=Plasmodium falciparum
(isolate 3D7) GN=MAL7P1.162 PE=2 SV=2
Length = 4985
Score = 70.9 bits (172), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 50/72 (69%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
GGR LI +GD+ VD+ P F L+LT++ + + P+ C ++ +NFT+T S L+ Q + +
Sbjct: 3858 GGRLLITIGDSEVDFSPSFNLFLTSRDAHFQFTPDLCSRVTFVNFTLTPSSLQNQCLNMI 3917
Query: 207 VRLERPDLEQER 218
++ ERPD++++R
Sbjct: 3918 LKNERPDIDKKR 3929
>sp|Q9C1M7|DYHC_ASHGO Dynein heavy chain, cytoplasmic OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN1 PE=3 SV=1
Length = 4083
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 115 ALSEGGHILFSLCTSGPHSPPM--NLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTK 172
AL GG IL G P+ +L + +GGR +++GD VD F+L + +K
Sbjct: 3436 ALRFGGCILIQ---DGEFFDPIISHLIAKEFKKAGGRLTVQIGDHEVDVSTSFQLIIHSK 3492
Query: 173 LPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSML 232
PN + ++ +INFTV+ +E Q + + E P+L+++R ++ + K L
Sbjct: 3493 DPNSYMSSFVKTRMAVINFTVSKGSIEAQALQITLEKENPELQKQRTDLLKLNGEYKLHL 3552
Query: 233 KEIEDNILRLLFTSEGEIL 251
+ +ED +L L S+G IL
Sbjct: 3553 RSLEDKLLESLNESDGSIL 3571
>sp|Q19542|DYHC2_CAEEL Cytoplasmic dynein 2 heavy chain 1 OS=Caenorhabditis elegans GN=che-3
PE=3 SV=2
Length = 4171
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 147 GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
G R +I G +D++P F++Y T+ P + +Q+ ++NFT T S L QL+
Sbjct: 3242 GPRQVISFGGKSIDFNPDFKIYFCTRDEKVDIRPNSYVQLNIVNFTTTISALSAQLLDVA 3301
Query: 207 VRLERPDLEQERNQVI 222
+ LE+P+LE+ + ++
Sbjct: 3302 IHLEKPELEERSSSLL 3317
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 51.6 bits (122), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
I + D + + P F + L T+L NPHY PE LINFTVT LEE L++ + E
Sbjct: 3841 ININDKELMFHPSFYIILHTQLSNPHYQPEIQSACSLINFTVTPDDLEEHLLSITLENEF 3900
Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
L +++ ++ + L ++ +IL+ L ++G+IL
Sbjct: 3901 NHLSKKKKKLSLLKYDYMCQLSFLQSSILQKLTDAKGDIL 3940
>sp|P36022|DYHC_YEAST Dynein heavy chain, cytoplasmic OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DYN1 PE=1 SV=1
Length = 4092
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 143 YPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPN---PHYLPETCIQIGLINFTVTSSGLE 199
+ +G R +++GD VD F+L++ + P+ P +L ++ L++F +E
Sbjct: 3470 FNHAGNRVTVEIGDHEVDVSGDFKLFIHSCDPSGDIPIFLRS---RVRLVHFVTNKESIE 3526
Query: 200 EQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
++ + E +++++R +I + K LK +E +L L S+G +L
Sbjct: 3527 TRIFDITLTEENAEMQRKREDLIKLNTEYKLKLKNLEKRLLEELNNSQGNML 3578
>sp|Q1J132|PYRD_DEIGD Dihydroorotate dehydrogenase (quinone) OS=Deinococcus geothermalis
(strain DSM 11300) GN=pyrD PE=3 SV=1
Length = 361
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 10 LKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPR--------- 60
L+LT + + RT + LGL L+ GE + PA G + TPR
Sbjct: 48 LRLTQTLWGRTFSSP--LGLAAGLDKNGEAV-PAFGALGFGFVEVGTVTPRAQPGNARPR 104
Query: 61 --RSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWT 98
R +D+A I+ M F N + +G L+ F + +W
Sbjct: 105 LFRLPSDEALINRMGFNNAGAEALQGQLAAHFARPVPVWV 144
>sp|A9KZF7|RIMO_SHEB9 Ribosomal protein S12 methylthiotransferase RimO OS=Shewanella
baltica (strain OS195) GN=rimO PE=3 SV=1
Length = 472
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 11 KLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIH 70
++ + Y R ME + L VG TLD IL+ +G R S+AD I
Sbjct: 379 EVKEDRYHRFMEVQAEISAERLARFVGRTLD-----ILIDDVDEEGAIGR-SFADAPEID 432
Query: 71 GMVFTNRACKMTKGFL 86
GMVF N ++ G L
Sbjct: 433 GMVFINGETELEPGML 448
>sp|A3D958|RIMO_SHEB5 Ribosomal protein S12 methylthiotransferase RimO OS=Shewanella
baltica (strain OS155 / ATCC BAA-1091) GN=rimO PE=3 SV=1
Length = 472
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 12 LTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHG 71
+ + Y R ME + L VG TLD IL+ +G R S+AD I G
Sbjct: 380 VKEDRYHRFMEVQAEISAERLARFVGRTLD-----ILIDDVDEEGAIGR-SFADAPEIDG 433
Query: 72 MVFTNRACKMTKGFL 86
MVF N ++ G L
Sbjct: 434 MVFINGETELEPGML 448
>sp|A6WIP6|RIMO_SHEB8 Ribosomal protein S12 methylthiotransferase RimO OS=Shewanella
baltica (strain OS185) GN=rimO PE=3 SV=1
Length = 472
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 12 LTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHG 71
+ + Y R ME + L VG TLD IL+ +G R S+AD I G
Sbjct: 380 VKEDRYHRFMEVQAEISAERLARFVGRTLD-----ILIDDVDEEGAIGR-SFADAPEIDG 433
Query: 72 MVFTNRACKMTKGFL 86
MVF N ++ G L
Sbjct: 434 MVFINGETELEPGML 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,748,866
Number of Sequences: 539616
Number of extensions: 4309063
Number of successful extensions: 9759
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 9654
Number of HSP's gapped (non-prelim): 131
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)