BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17993
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
Length = 297
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 43 LHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYIDKVLDNQLFRETRET 102
L I V N S+ FN L HTY ++ D+ V+ L G D++L + + +
Sbjct: 137 LKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLL-KESYVDKHPV 195
Query: 103 VSVSSLTDRIYQNTCQEHVVTNVVSGRKMR-LQKYNFPDTVIWNPW-DTGRDMKDFGDDE 160
V+ + TD IYQN E + V G ++ L++YN PDTV+WNPW + + M DF
Sbjct: 196 VTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKT 255
Query: 161 -YPNMICVEAGHVTSPVLLHPGTTFEASQIL 190
Y MIC+E GHV + L PG + A Q+L
Sbjct: 256 GYQQMICIEPGHVHDFISLAPGKKWNAYQLL 286
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
SV=1
Length = 329
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 16 PYLDIFCIFPYFARFRLTYRLILREKELHFNIGVYNPSND-LAFNFNLLLHTYLKVPDVR 74
P + I+P+ FRL L +L + N + D F++ HTY V D+
Sbjct: 134 PAEEDLKIWPHSFEFRLRVAL-GPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDIS 192
Query: 75 RCQVNGLYGCHYIDKVLDNQLFRETRETVSVSSLTDRIYQNTCQEHVVTNVVSGRKMRLQ 134
+V GL Y+D + + F E + + S D++Y + + + + +
Sbjct: 193 EVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVT 252
Query: 135 KYNFPDTVIWNPWDT-GRDMKDFGDDEYPNMICVEAGHVTSPVLLHPGTTFEA 186
K PD V+WNPWD + M+DFGD EY NM+CVE V P+ L PG +
Sbjct: 253 KEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRG 305
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
(strain K12) GN=yeaD PE=1 SV=2
Length = 294
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 58 FNFNLLLHTYLKVPDVRRCQVNGLYGCHYIDKVLDNQLFRETRETVSVSSLTDRIYQNTC 117
F LHTY V D+ + V+GL G +IDKV D + T + TDR+Y N
Sbjct: 157 FETTSALHTYFNVGDIAKVSVSGL-GDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQ 215
Query: 118 QEHVVTNVVSGRKMRLQKYNFPDTVIWNPWDT-GRDMKDFGDDEYPNMICVEAGHVT 173
V+ + R + + + + V WNP M D DD Y +CVE + +
Sbjct: 216 DCSVINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYAS 272
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
PE=3 SV=1
Length = 271
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 64 LHTYLKVPDVRRCQVNGLYGCHYIDKVLDNQLFRETRETVS---VSSLTDRIYQNTCQEH 120
LHTY + D+ + +V GL + N L ++ S +S D IY ++
Sbjct: 150 LHTYFNIGDINQVEVQGL------PETCFNSLNQQQENVPSPRHISENVDCIYSAENMQN 203
Query: 121 VVTNVVSGRKMRLQKYNFPDTVIWNPWDTGRDMKDFGDDEYPNMICVEAGHV 172
+ + R + L +N V+WNPW + + Y M+C+E +
Sbjct: 204 QILDKSFNRTIALHHHNASQFVLWNPWH--KKTSGMSETGYQKMLCLETARI 253
>sp|P24829|VE1_HPV39 Replication protein E1 OS=Human papillomavirus type 39 GN=E1 PE=3
SV=1
Length = 647
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 145 NPWDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
N DTG D+ DF DD ICV+A T+ VLLH
Sbjct: 39 NATDTGSDLADFIDDSTD--ICVQAERETAQVLLH 71
>sp|Q756C7|DML1_ASHGO Protein DML1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=DML1 PE=3 SV=1
Length = 465
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 47 IGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVN-----GLYGCHYIDKVLDNQLFRETRE 101
G SN L +L + L P +R + G + CH +D V ++R
Sbjct: 254 AGFQRQSNKLRATLAMLEQSDLYFP-IRSEAADSLWEAGGWACHVLDSVNSAMCLEKSRT 312
Query: 102 TVSVSSLTDRIYQNTCQEHVVTNVVSGRK 130
++ L DR++ Q +VV+ + SG++
Sbjct: 313 LRFMNQLADRLHSGDEQRNVVSLMSSGQR 341
>sp|Q83IH7|OPGB_SHIFL Phosphoglycerol transferase I OS=Shigella flexneri GN=mdoB PE=3
SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B1LEG3|OPGB_ECOSM Phosphoglycerol transferase I OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B1IS59|OPGB_ECOLC Phosphoglycerol transferase I OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|Q1R2E6|OPGB_ECOUT Phosphoglycerol transferase I OS=Escherichia coli (strain UTI89 /
UPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|P39401|OPGB_ECOLI Phosphoglycerol transferase I OS=Escherichia coli (strain K12)
GN=mdoB PE=3 SV=2
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|C4ZT42|OPGB_ECOBW Phosphoglycerol transferase I OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7LE10|OPGB_ECO55 Phosphoglycerol transferase I OS=Escherichia coli (strain 55989 /
EAEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7MNB1|OPGB_ECO45 Phosphoglycerol transferase I OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B2TZP2|OPGB_SHIB3 Phosphoglycerol transferase I OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B6I2P2|OPGB_ECOSE Phosphoglycerol transferase I OS=Escherichia coli (strain SE11)
GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|A8A888|OPGB_ECOHS Phosphoglycerol transferase I OS=Escherichia coli O9:H4 (strain HS)
GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7LXS2|OPGB_ECO8A Phosphoglycerol transferase I OS=Escherichia coli O8 (strain IAI1)
GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7NH28|OPGB_ECOLU Phosphoglycerol transferase I OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7UQY8|OPGB_ECO27 Phosphoglycerol transferase I OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLL 178
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLL 516
>sp|Q8FA73|OPGB_ECOL6 Phosphoglycerol transferase I OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B5Z4P2|OPGB_ECO5E Phosphoglycerol transferase I OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|Q8XB59|OPGB_ECO57 Phosphoglycerol transferase I OS=Escherichia coli O157:H7 GN=mdoB
PE=3 SV=2
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7N380|OPGB_ECO81 Phosphoglycerol transferase I OS=Escherichia coli O81 (strain ED1a)
GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|B7NVC9|OPGB_ECO7I Phosphoglycerol transferase I OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|Q0T8V3|OPGB_ECOL5 Phosphoglycerol transferase I OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ NMI H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLR 517
>sp|Q6GI35|SSPB_STAAR Staphopain B OS=Staphylococcus aureus (strain MRSA252) GN=sspB PE=3
SV=1
Length = 393
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 85 HYIDKVLD-NQLFRETRETVSVSSLTDRIYQNTCQEHV--VTNVVSGRKMRLQKYNFPDT 141
HY + V NQ+ + T++ V + L + QN H+ VV+ K+ Q+
Sbjct: 301 HYQEGVPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVANAKINDQE----KL 356
Query: 142 VIWNPWDTGRDMKD 155
+ WNPWDT ++D
Sbjct: 357 IYWNPWDTELSIQD 370
>sp|P0C1S6|SSPB_STAAU Staphopain B OS=Staphylococcus aureus GN=sspB PE=1 SV=1
Length = 393
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 85 HYIDKVLD-NQLFRETRETVSVSSLTDRIYQNTCQEHV--VTNVVSGRKMRLQKYNFPDT 141
HY + V NQ+ + T++ V + L + QN H+ VV K+ Q+
Sbjct: 301 HYQEGVPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQE----KL 356
Query: 142 VIWNPWDTGRDMKD 155
+ WNPWDT ++D
Sbjct: 357 IYWNPWDTELSIQD 370
>sp|A7ZVP9|OPGB_ECO24 Phosphoglycerol transferase I OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=mdoB PE=3 SV=1
Length = 763
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 126 VSGRKMRLQKYNFPD-TVIWNP-----WDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLH 179
+SG+ M N + T+ W P W ++MK+F D+ N+I H P+LL
Sbjct: 458 LSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNIIAFSGSHFRLPLLLR 517
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,181,036
Number of Sequences: 539616
Number of extensions: 2926815
Number of successful extensions: 6104
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 6080
Number of HSP's gapped (non-prelim): 48
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)