Query psy17993
Match_columns 191
No_of_seqs 176 out of 1099
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:34:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jov_A HI1317; hypothetical pr 100.0 3E-35 1E-39 238.3 19.3 165 8-191 105-269 (270)
2 3k25_A SLR1438 protein; struct 100.0 6.2E-35 2.1E-39 238.5 19.1 166 9-191 108-285 (289)
3 2cir_A Hexose-6-phosphate muta 100.0 1.9E-35 6.5E-40 242.3 15.1 178 11-191 101-287 (297)
4 2hta_A Putative enzyme related 100.0 8E-35 2.7E-39 239.9 15.2 174 11-191 130-305 (309)
5 3dcd_A Galactose mutarotase re 100.0 3.4E-29 1.2E-33 206.1 17.9 170 9-191 87-290 (307)
6 3q1n_A Galactose mutarotase re 100.0 7E-29 2.4E-33 203.1 19.0 171 8-191 86-292 (294)
7 3mwx_A Aldose 1-epimerase; str 100.0 6E-29 2E-33 206.2 17.2 166 11-191 124-320 (326)
8 3os7_A Galactose mutarotase-li 100.0 9.5E-29 3.3E-33 206.2 17.2 166 12-191 132-337 (341)
9 1yga_A Hypothetical 37.9 kDa p 99.9 4E-27 1.4E-31 196.3 14.4 172 9-191 116-339 (342)
10 3nre_A Aldose 1-epimerase; str 99.9 8.1E-26 2.8E-30 184.7 18.8 165 9-190 98-286 (291)
11 1snz_A Aldose 1-epimerase; mut 99.9 9.1E-26 3.1E-30 188.3 11.7 176 11-191 127-340 (344)
12 1lur_A Aldose 1-epimerase; vit 99.9 5.4E-23 1.8E-27 171.3 14.7 172 10-191 119-334 (339)
13 1z45_A GAL10 bifunctional prot 99.9 4.6E-22 1.6E-26 179.1 18.3 169 11-190 482-696 (699)
14 1nsx_A Galactose mutarotase; e 99.9 2.8E-21 9.5E-26 161.4 14.2 169 12-190 119-334 (347)
15 3imh_A Galactose-1-epimerase; 99.8 1E-17 3.5E-22 139.1 15.4 175 7-190 119-327 (338)
16 3ty1_A Hypothetical aldose 1-e 99.7 1.9E-17 6.6E-22 139.7 13.1 168 11-190 157-349 (384)
17 4ep8_B Urease subunit beta; al 89.4 0.27 9.4E-06 32.8 2.9 32 35-69 12-43 (101)
18 4ac7_B Urease subunit beta; hy 86.0 0.43 1.5E-05 33.2 2.4 32 35-69 18-49 (126)
19 4ubp_B Protein (urease (chain 86.0 0.43 1.5E-05 33.2 2.4 32 35-69 18-49 (126)
20 3isy_A Bsupi, intracellular pr 82.9 3.5 0.00012 28.5 6.0 32 30-62 7-38 (120)
21 1yew_A Particulate methane mon 73.6 3.6 0.00012 33.9 4.2 29 32-61 255-283 (382)
22 3rfr_A PMOB; membrane, oxidore 72.3 3.4 0.00012 34.3 3.9 28 33-61 290-317 (419)
23 3qga_A UREA2, fusion of urease 71.9 1.5 5.2E-05 33.4 1.6 32 35-69 117-148 (225)
24 2ys4_A Hydrocephalus-inducing 58.8 8.5 0.00029 26.0 3.3 40 31-71 31-70 (122)
25 1e9y_A Urease subunit alpha; h 57.2 4.5 0.00015 31.1 1.7 32 35-69 117-148 (238)
26 4gy7_A Urease; JACK bean, hydr 55.1 7.6 0.00026 35.6 3.1 31 35-68 143-173 (840)
27 3bs6_A Inner membrane protein 53.2 51 0.0017 25.6 7.4 32 29-61 103-136 (280)
28 1pxv_A Cysteine protease; hydr 47.0 18 0.00063 26.6 3.5 34 137-185 142-175 (183)
29 3abz_A Beta-glucosidase I; gly 45.2 9.4 0.00032 35.1 2.1 33 23-55 709-750 (845)
30 1cv8_A Staphopain; cysteine pr 45.0 11 0.00039 27.6 2.1 35 136-185 132-166 (174)
31 2xn2_A Alpha-galactosidase; hy 43.7 1.4E+02 0.0047 26.8 9.5 55 10-71 134-190 (732)
32 1k1x_A 4-alpha-glucanotransfer 43.7 42 0.0014 29.8 6.0 38 26-64 539-576 (659)
33 2e6j_A Hydin protein; PAPD, st 42.9 65 0.0022 20.8 5.8 24 38-62 23-46 (112)
34 2yfo_A Alpha-galactosidase-suc 42.8 74 0.0025 28.5 7.5 55 10-71 130-186 (720)
35 2kl8_A OR15; structural genomi 42.2 26 0.0009 21.3 3.1 19 30-48 29-47 (85)
36 3blc_A Inner membrane protein 41.6 96 0.0033 24.7 7.5 31 29-60 134-166 (330)
37 4fnq_A Alpha-galactosidase AGA 36.7 1E+02 0.0035 27.6 7.5 58 8-72 128-187 (729)
38 2x3c_A Toxic extracellular end 33.0 48 0.0016 26.9 4.3 29 31-60 23-54 (343)
39 3mi6_A Alpha-galactosidase; NE 32.8 1.5E+02 0.0051 26.8 7.8 56 9-71 130-187 (745)
40 3cfu_A Uncharacterized lipopro 32.8 38 0.0013 24.2 3.3 26 42-71 48-73 (159)
41 2x41_A Beta-glucosidase; hydro 31.6 20 0.00068 32.2 2.0 32 24-55 590-629 (721)
42 2xbt_A Cellulosomal scaffoldin 28.7 97 0.0033 22.1 4.9 33 40-73 23-56 (160)
43 3ndz_E Endoglucanase D; cellot 28.1 1.1E+02 0.0037 20.2 4.8 26 33-59 4-32 (107)
44 1x9y_A Cysteine proteinase; ha 27.6 75 0.0026 26.0 4.5 20 137-169 318-337 (367)
45 2wnx_A Glycoside hydrolase, fa 27.1 1.4E+02 0.0048 21.5 5.6 32 40-72 26-58 (170)
46 3zyz_A Beta-D-glucoside glucoh 25.3 33 0.0011 30.8 2.2 15 41-55 613-627 (713)
47 3zqx_A Cellulose 1,4-beta-cell 25.1 1.7E+02 0.0059 20.5 5.6 46 32-78 3-54 (146)
48 3lzq_A P19 protein; copper bin 24.7 1.5E+02 0.0052 21.2 5.2 28 43-70 66-100 (159)
49 2g30_A AP-2 complex subunit be 23.0 1.3E+02 0.0044 23.2 5.0 31 28-59 42-72 (258)
50 3nrp_A Periplasmic protein-pro 21.4 1.9E+02 0.0066 20.7 5.2 29 43-71 68-103 (160)
51 3cjl_A Domain of unknown funct 20.6 1.2E+02 0.0039 19.6 3.6 26 28-54 4-29 (88)
52 2nvn_A Hypothetical protein; s 20.3 1.4E+02 0.0047 20.5 4.0 40 3-45 60-102 (122)
No 1
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=3e-35 Score=238.29 Aligned_cols=165 Identities=18% Similarity=0.355 Sum_probs=139.3
Q ss_pred CCCeEEEEEccCCCcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCCCceEEeeCCCCeee
Q psy17993 8 TLDAFCIFPYLDIFCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYI 87 (191)
Q Consensus 8 ~~~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~~~ 87 (191)
.+.+.++|.|.++ ++.|+|+++|+|. |+++++|+|+|++ ||++|+||||++++++++++.++.+ .|+
T Consensus 105 ~~~v~l~~~l~~~------~~~f~l~~~~~L~---l~~~~~v~N~g~~---p~~~g~HpyF~v~d~~~~~v~g~~~-~~~ 171 (270)
T 1jov_A 105 VHKVRLEFELFSD------LNIIEAKVSMVFT---DKCHLTFTHYGEE---SAQAALHTYFNIGDINQVEVQGLPE-TCF 171 (270)
T ss_dssp TTEEEEEEEEECT------TSCEEEEEEEEES---SSEEEEEEECCSS---CEEEEECCEEECSCGGGEEEESCCS-EEE
T ss_pred CCcEEEEEEECCC------ccccEEEEEEEEC---CeEEEEEEeCCch---hHhhhcccceecCCcceEEEECCCC-cce
Confidence 3445788888775 2459999999995 8999999999966 4799999999999999999999944 788
Q ss_pred eccCCcceeeeecceEEeCCCCCeeEeCCCCeEEEEEeCCCceEEEEEeCCCcEEEeCCccCCCCCCCCCCCCCCceEEe
Q psy17993 88 DKVLDNQLFRETRETVSVSSLTDRIYQNTCQEHVVTNVVSGRKMRLQKYNFPDTVIWNPWDTGRDMKDFGDDEYPNMICV 167 (191)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~~~~D~iy~~~~~~~~l~~~~~~~~i~v~~~~~~~~vvWnp~~~~~~~~d~~~~~~~~fvCi 167 (191)
|++..... ...+.+.+.+++|++|.++++.+.|.+++.++.|+|+.++++++||||||. +.|+||+++++++||||
T Consensus 172 d~l~~~~~--~~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~~--~~~~d~~~~~~~~fvCv 247 (270)
T 1jov_A 172 NSLNQQQE--NVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWH--KKTSGMSETGYQKMLCL 247 (270)
T ss_dssp ETTTTEEE--ECCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEEEECTT--SCCTTCCTTGGGGEEEE
T ss_pred eccCCccc--ccCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEEEECCCc--ccccccccccCccEEEe
Confidence 88765322 223467788889999998878899999888999999999999999999973 56899999999999999
Q ss_pred cceecCCCeEeCCCCEEEEEEEeC
Q psy17993 168 EAGHVTSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 168 EP~~~~~~~~L~pGe~~~~~~~i~ 191 (191)
||+++ .+.|+|||+++++++|+
T Consensus 248 Ep~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 248 ETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp EEEEE--EEEECTTCEEEEEEEEC
T ss_pred Ccccc--ceEECCCCEEEEEEEEE
Confidence 99875 57899999999999985
No 2
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=6.2e-35 Score=238.52 Aligned_cols=166 Identities=13% Similarity=0.135 Sum_probs=139.6
Q ss_pred CCeEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCCCceEEeeCCCCeee
Q psy17993 9 LDAFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYI 87 (191)
Q Consensus 9 ~~~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~~~ 87 (191)
+..+++|.|.++ ++++.|||+|+++++|+|.+++|+++++|+|++++ +|||++|+||||++++++++++.++. ..|+
T Consensus 108 ~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~i~~~~~N~~~~-~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~ 185 (289)
T 3k25_A 108 DNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIANLGDQ-RMPFSLGFHPYFFCREKLGITLAIPA-NDYL 185 (289)
T ss_dssp SSEEEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEEECSSS-CEEECCEECCEEECSCCTTCEEECSC-SEEE
T ss_pred CCcEEEEEEecChhHHhcCCceEEEEEEEEEeCCEEEEEEEEEcCCCC-cceeEEecCcEEccCCcceEEEEcCc-cccc
Confidence 456899999988 78999999999999999999999999999999999 99999999999999999999999874 4678
Q ss_pred eccCCcceeeeecceEEeC-CCCCeeEeCC-CCeEEEEEeCCCceEEEEEeC-CCcEEEeCCccCCCCCCCCCCCCCCce
Q psy17993 88 DKVLDNQLFRETRETVSVS-SLTDRIYQNT-CQEHVVTNVVSGRKMRLQKYN-FPDTVIWNPWDTGRDMKDFGDDEYPNM 164 (191)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~-~~~D~iy~~~-~~~~~l~~~~~~~~i~v~~~~-~~~~vvWnp~~~~~~~~d~~~~~~~~f 164 (191)
+...... . ...+.+.+. .++|++|.+. .+.++|.++..++.|+|..++ ++++|||||. +++|
T Consensus 186 d~~~~~~-~-~~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~v~~~~~~~~~vvw~~~-------------~~~f 250 (289)
T 3k25_A 186 DQKTGDC-H-GYDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIEVSFSELYQTLVLWTVA-------------GKDY 250 (289)
T ss_dssp ETTTCCE-E-ECCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEEEEECTTCCEEEEEEES-------------SSCE
T ss_pred ccccCcc-c-ccCCcccCCchhhceEeecCCCCeEEEEECCCCCEEEEEeCCCCcEEEEEecC-------------CCCE
Confidence 7654321 1 122334444 4689999876 457889998889999999887 9999999984 4689
Q ss_pred EEecceec--------CCCeEeCCCCEEEEEEEeC
Q psy17993 165 ICVEAGHV--------TSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 165 vCiEP~~~--------~~~~~L~pGe~~~~~~~i~ 191 (191)
||||||+. .+.+.|+|||+++++++|+
T Consensus 251 vCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~ 285 (289)
T 3k25_A 251 LCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQ 285 (289)
T ss_dssp EEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEE
T ss_pred EEEccccCCCCcccCCCCcEEECCCCeEEEEEEEE
Confidence 99999963 2479999999999999884
No 3
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=1.9e-35 Score=242.28 Aligned_cols=178 Identities=31% Similarity=0.522 Sum_probs=150.3
Q ss_pred eEEEEEccC---C-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCC-CCceeEEeeccceeEEeCCCCceEEeeCCCCe
Q psy17993 11 AFCIFPYLD---I-FCIFPYFARFRLTYRLILREKELHFNIGVYNPS-NDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCH 85 (191)
Q Consensus 11 ~~~~~~l~~---~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~-~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~ 85 (191)
++++|.|.+ + ++++.|||.|+++++|+|++++|+++++++|++ ++ +|||++|+||||+++++.++.+.|+.+..
T Consensus 101 ~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~~~L~i~~~~~N~~~d~-~~~~~~~~H~YFnl~~~~~~~~~gv~~~~ 179 (297)
T 2cir_A 101 PTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSK-ELKFNWLFHTYFRIEDIEGTMVSNLAGMK 179 (297)
T ss_dssp EEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEEEECCCSSC-CEEEEEEECCEEECSCGGGEEEESCTTCE
T ss_pred eEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcCCEEEEEEEEEcCCCCc-ceEEeeecCceEeCCCccceEEecCCCCc
Confidence 679999999 8 889999999999999999989999999999999 99 99999999999999988888888887767
Q ss_pred eeeccCCcceeeeecceEEeCCCCCeeEeCCC--CeEEEEEeCCCceEEEEEeCCCcEEEeCCcc-CCCCCCCC-CCCCC
Q psy17993 86 YIDKVLDNQLFRETRETVSVSSLTDRIYQNTC--QEHVVTNVVSGRKMRLQKYNFPDTVIWNPWD-TGRDMKDF-GDDEY 161 (191)
Q Consensus 86 ~~d~~~~~~~~~~~~~~~~~~~~~D~iy~~~~--~~~~l~~~~~~~~i~v~~~~~~~~vvWnp~~-~~~~~~d~-~~~~~ 161 (191)
++|.... .........+++..+.|++|.... ..++|.++ .++.|+|..+++|+++||||+. +++.|.|+ +.++|
T Consensus 180 ~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~~~~~~~~~~~~~~~~~~ 257 (297)
T 2cir_A 180 LYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGY 257 (297)
T ss_dssp EEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCCEEEEEECHHHHHHHCTTCCSTTGG
T ss_pred cEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEEEECcchhhccccccCCCcccc
Confidence 8886533 222222345777778999997654 56889888 8999999999999999999974 55556676 56667
Q ss_pred CceEEecceecCCCeEeCCCCEEEEEEEeC
Q psy17993 162 PNMICVEAGHVTSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 162 ~~fvCiEP~~~~~~~~L~pGe~~~~~~~i~ 191 (191)
++|||||||+..+.+.|+|||+++.+++|+
T Consensus 258 ~~~vClEp~~~~~~~~L~pGe~~~~~~~~~ 287 (297)
T 2cir_A 258 QQMICIEPGHVHDFISLAPGKKWNAYQLLC 287 (297)
T ss_dssp GGEEEEEEEEEEEEEEECTTCEEEEEEEEE
T ss_pred ccEEEECceECCCCEEECCCCeEEEEEEEE
Confidence 899999999876679999999999998873
No 4
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=8e-35 Score=239.93 Aligned_cols=174 Identities=25% Similarity=0.326 Sum_probs=150.4
Q ss_pred eEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCCCceEEeeCCCCeeeec
Q psy17993 11 AFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYIDK 89 (191)
Q Consensus 11 ~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~~~d~ 89 (191)
++++|.|.++ ++++.|||.|+++++|+| +++|+++++++| +|||++|+||||+++++.++.+.++ +..|++.
T Consensus 130 ~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~~~L~i~~~~~N-----~~~~~~g~H~YFnl~~~~~~~l~~~-~~~~~~~ 202 (309)
T 2hta_A 130 VMLTFELQSSEATRKYWPHDFTLLARFKV-GKTCEIELEAHG-----EFATTSALHSYFNVGDIANVKVSGL-GDRFIDK 202 (309)
T ss_dssp EEEEEEEECCHHHHHHSCCCCEEEEEEEE-SSSEEEEEEEES-----SEEEEEEECCEEECSCGGGCEEECC-CSEEEET
T ss_pred eEEEEEeCCChHHhhcCCCceEEEEEEEE-CCceEEEEEEEC-----CeEehhcCCceEecCCccceEEECC-CCceEec
Confidence 6899999988 899999999999999999 999999999999 4999999999999998888888887 6778886
Q ss_pred cCCcceeeeecceEEeCCCCCeeEeCCCCeEEEEEeCCCceEEEEEeCCCcEEEeCCcc-CCCCCCCCCCCCCCceEEec
Q psy17993 90 VLDNQLFRETRETVSVSSLTDRIYQNTCQEHVVTNVVSGRKMRLQKYNFPDTVIWNPWD-TGRDMKDFGDDEYPNMICVE 168 (191)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~D~iy~~~~~~~~l~~~~~~~~i~v~~~~~~~~vvWnp~~-~~~~~~d~~~~~~~~fvCiE 168 (191)
++.+......+..++|..+.|++|.+....++|.++..++.|+|..+++++++||||+. +++.|.|+++++|++|||||
T Consensus 203 ~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp~~~~~~~~~d~~~~~~~~~vClE 282 (309)
T 2hta_A 203 VNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVE 282 (309)
T ss_dssp TTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEEEEECHHHHHHHCTTSCTTGGGGEEEEE
T ss_pred cCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEEEECCCcccccccccCCccccccEEEEC
Confidence 65543322334568899999999986556788999888999999999999999999985 56668888888889999999
Q ss_pred ceecCCCeEeCCCCEEEEEEEeC
Q psy17993 169 AGHVTSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 169 P~~~~~~~~L~pGe~~~~~~~i~ 191 (191)
||+..+.+.|+|||+++.+++|+
T Consensus 283 p~~~~~~~~L~PGe~~~~~~~~~ 305 (309)
T 2hta_A 283 TVYATAPQQATEEKPSRLAQTIC 305 (309)
T ss_dssp EEEEEEEEEEBTTBCEEEEEEEE
T ss_pred eeecCCCEEECCCCeEEEEEEEE
Confidence 99886679999999999998873
No 5
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=99.97 E-value=3.4e-29 Score=206.12 Aligned_cols=170 Identities=16% Similarity=0.161 Sum_probs=124.9
Q ss_pred CCeEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCC-----CCceEEeeCC
Q psy17993 9 LDAFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-----VRRCQVNGLY 82 (191)
Q Consensus 9 ~~~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-----~~~~~~~gl~ 82 (191)
++++|+|+|.++ ++++.|||.|+++++|+|.+++|+++++|+|+|++ +|||++|+||||+++. +.+..+. +.
T Consensus 87 ~~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~v~N~g~~-~~p~~~g~HpyF~~~~~~~~~~~d~~L~-~~ 164 (307)
T 3dcd_A 87 TKESITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDE-TMIFGVGGHPGFNLPTDHGENKEDFYFD-MH 164 (307)
T ss_dssp ETTEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSS-CEEECEEECCEEECCCTTSCCGGGEEEE-EE
T ss_pred cCCEEEEEEecCcchhhhCCCceEEEEEEEEeCCEEEEEEEEECCCCC-cEeEEEEcCcEEEcCCCCCCccccEEEE-Ec
Confidence 456899999998 89999999999999999999999999999999999 9999999999999984 2344443 11
Q ss_pred CCeeeec--cCCcc------eeeeecceEEeCCC-C--CeeEe-CCC--CeEEEEEeCCCceEEEEEeCCCcEEEeCCcc
Q psy17993 83 GCHYIDK--VLDNQ------LFRETRETVSVSSL-T--DRIYQ-NTC--QEHVVTNVVSGRKMRLQKYNFPDTVIWNPWD 148 (191)
Q Consensus 83 ~~~~~d~--~~~~~------~~~~~~~~~~~~~~-~--D~iy~-~~~--~~~~l~~~~~~~~i~v~~~~~~~~vvWnp~~ 148 (191)
....++. ++.+. ......+.++++.. + |++++ ++. ..++|.++..++.|+|..++||+++||+|..
T Consensus 165 a~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~ 244 (307)
T 3dcd_A 165 PSVTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYELRGNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYP 244 (307)
T ss_dssp SCCCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEECCSSCEEEEEEETTSSCEEEEEEETCSEEEEECCSS
T ss_pred CCCceeeeecCCcccccccccccccCCcccCCHHHcCCceEEEcCCCCceEEEEEeCCCCcEEEEEECCCCEEEEECcCC
Confidence 1111111 11110 00111234556553 3 45544 443 4688998888999999999999999999831
Q ss_pred CCCCCCCCCCCCCCceEEecceec-------C-------CCeEeCCCCEEEEEEEeC
Q psy17993 149 TGRDMKDFGDDEYPNMICVEAGHV-------T-------SPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 149 ~~~~~~d~~~~~~~~fvCiEP~~~-------~-------~~~~L~pGe~~~~~~~i~ 191 (191)
+.++|||||||+. . +.+.|+|||+++.+++|+
T Consensus 245 -----------~~~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~i~ 290 (307)
T 3dcd_A 245 -----------KTDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMT 290 (307)
T ss_dssp -----------SCCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEE
T ss_pred -----------CCCCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEE
Confidence 1248999999951 1 269999999999999884
No 6
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=99.96 E-value=7e-29 Score=203.14 Aligned_cols=171 Identities=13% Similarity=0.125 Sum_probs=125.5
Q ss_pred CCCeEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCC-----CCceEEeeC
Q psy17993 8 TLDAFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-----VRRCQVNGL 81 (191)
Q Consensus 8 ~~~~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-----~~~~~~~gl 81 (191)
.++++|+|+|.++ ++++.|||.|+++++|+|.+++|+++++|+|++++ +|||++|+||||+++. +.+..+. +
T Consensus 86 ~~~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~~~N~~~~-~~p~~~~~H~yFnl~~~~~~~~~d~~l~-~ 163 (294)
T 3q1n_A 86 KSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSK-SMPFALGFHPAFNVGLKADGSFDDYDLT-V 163 (294)
T ss_dssp CCSSEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSS-CEEECEEECCEEECCBCTTSSBCSCEEE-E
T ss_pred ccCCEEEEEEEcCcchhhcCCeEEEEEEEEEEeCCEEEEEEEEEcCCCC-ceeeeEecCcEEEcCCCCCCcccCEEEE-E
Confidence 4567899999998 88999999999999999999999999999999999 9999999999999983 2344443 1
Q ss_pred CCCe----eeeccCCcceee------e-ecceEEeCCC-C--CeeEeC-C-CCeEEEEEeCCCceEEEEEeCCCcEEEeC
Q psy17993 82 YGCH----YIDKVLDNQLFR------E-TRETVSVSSL-T--DRIYQN-T-CQEHVVTNVVSGRKMRLQKYNFPDTVIWN 145 (191)
Q Consensus 82 ~~~~----~~d~~~~~~~~~------~-~~~~~~~~~~-~--D~iy~~-~-~~~~~l~~~~~~~~i~v~~~~~~~~vvWn 145 (191)
.... ++...+...... . ....+.+... + |+++++ . ...++|.+++.++.|+|..+++|+++||+
T Consensus 164 ~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt 243 (294)
T 3q1n_A 164 EPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTIWS 243 (294)
T ss_dssp ECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEECTTCSCCEEEECTTCSEEEEEC
T ss_pred cCCcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEeCCCCcEEEEEECCCCEEEEEC
Confidence 1112 332111111100 0 1223445432 3 455554 3 35688998888999999998899999999
Q ss_pred CccCCCCCCCCCCCCCCceEEecceec-------C-------CCeEeCCCCEEEEEEEeC
Q psy17993 146 PWDTGRDMKDFGDDEYPNMICVEAGHV-------T-------SPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 146 p~~~~~~~~d~~~~~~~~fvCiEP~~~-------~-------~~~~L~pGe~~~~~~~i~ 191 (191)
|.. ..++|||||||+. . +.+.|+|||+++.+++|+
T Consensus 244 ~~~-----------~~~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I~ 292 (294)
T 3q1n_A 244 PEH-----------KKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVE 292 (294)
T ss_dssp CTT-----------SCCSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEEE
T ss_pred cCC-----------CCCCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEE
Confidence 842 1248999999941 1 268999999999999984
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=99.96 E-value=6e-29 Score=206.19 Aligned_cols=166 Identities=13% Similarity=0.140 Sum_probs=124.7
Q ss_pred eEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCCCceEEeeCCCCeeeec
Q psy17993 11 AFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYIDK 89 (191)
Q Consensus 11 ~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~~~d~ 89 (191)
+.++|.+.++ ++++.|||.|+++++|+|.+++|+++++|+|++++ +|||++|+||||+++ +.+..+... ...++..
T Consensus 124 v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~-~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~~~ 200 (326)
T 3mwx_A 124 VETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKE-AFPWGIGYHTTFIFP-AESSLFSLT-ADQQWEL 200 (326)
T ss_dssp EEEEEEGGGCHHHHHHSCSCEEEEEEEEEETTEEEEEEEEEECSSS-CEEECCEECCCEECC-TTTEEEEES-EEEEEEE
T ss_pred EEEEEEeCCCCccccCCCceEEEEEEEEEcCCcEEEEEEEEECCCC-ceeeEEeeccccCCC-CCCEEEEEE-CCcEEEe
Confidence 3556667777 78899999999999999999999999999999999 999999999999998 777766532 2234321
Q ss_pred ----cCCcceeee------ecceEEeCCCCCeeEeCC------CCeEEEEEeCCCceEEEEE-eCCCcEEEeCCccCCCC
Q psy17993 90 ----VLDNQLFRE------TRETVSVSSLTDRIYQNT------CQEHVVTNVVSGRKMRLQK-YNFPDTVIWNPWDTGRD 152 (191)
Q Consensus 90 ----~~~~~~~~~------~~~~~~~~~~~D~iy~~~------~~~~~l~~~~~~~~i~v~~-~~~~~~vvWnp~~~~~~ 152 (191)
++.+..... ....+.+..++|++|... ...+.|.++..++.|.|.. .++++++||+|+.
T Consensus 201 d~~~iptg~~~~~~~~~~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~---- 276 (326)
T 3mwx_A 201 DERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG---- 276 (326)
T ss_dssp CTTSCEEEEEEECTTHHHHHHCBCCTTCCCEEEEEESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS----
T ss_pred CCccCCCCccccCcchhhcccCcccCCccccceeeeccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC----
Confidence 111110000 011233445688888754 2468899988889999987 6899999999862
Q ss_pred CCCCCCCCCCceEEecceec-------------CCCeEeCCCCEEEEEEEeC
Q psy17993 153 MKDFGDDEYPNMICVEAGHV-------------TSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 153 ~~d~~~~~~~~fvCiEP~~~-------------~~~~~L~pGe~~~~~~~i~ 191 (191)
+++|||||||+. .+.+.|+|||+++.+++|+
T Consensus 277 --------~~~~vclEP~~~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~ 320 (326)
T 3mwx_A 277 --------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSIT 320 (326)
T ss_dssp --------CSSEEEEEEESSCTTGGGCCSCHHHHCCEEECTTCEEEEEEEEE
T ss_pred --------CCCEEEECCccCCCCccccCCCccccCCeEECCCCeEEEEEEEE
Confidence 458999999961 1258999999999999874
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=99.96 E-value=9.5e-29 Score=206.16 Aligned_cols=166 Identities=15% Similarity=0.239 Sum_probs=124.4
Q ss_pred EEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeC-----CCCceEEeeCCCCe
Q psy17993 12 FCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVP-----DVRRCQVNGLYGCH 85 (191)
Q Consensus 12 ~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~-----~~~~~~~~gl~~~~ 85 (191)
.++|.+.++ ++++.|||.|+++++|+|.+++|+++++|+|++++ +|||++|+||||+++ ++.+..+.. ....
T Consensus 132 ~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~-~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~ 209 (341)
T 3os7_A 132 EVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLKQTTSVVNLSSE-EMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDK 209 (341)
T ss_dssp EEEEEECTTSTTTTTSCCCEEEEEEEEEETTEEEEEEEEEECSSS-CEEECCEECCEEESSCBTTCCGGGEEEEE-CEEE
T ss_pred EEEEEeCCCcchhhcCCceEEEEEEEEEeCCeEEEEEEEEeCCCC-cEEEEEecCceeecCCCCCCCcccEEEEE-eCCc
Confidence 457777777 89999999999999999999999999999999999 999999999999998 355666652 2334
Q ss_pred eeec----cCCcceeeee--------cceEEeCCCCCeeEeCC----C----CeEEEEEeCCCceEEEEE-eCCCcEEEe
Q psy17993 86 YIDK----VLDNQLFRET--------RETVSVSSLTDRIYQNT----C----QEHVVTNVVSGRKMRLQK-YNFPDTVIW 144 (191)
Q Consensus 86 ~~d~----~~~~~~~~~~--------~~~~~~~~~~D~iy~~~----~----~~~~l~~~~~~~~i~v~~-~~~~~~vvW 144 (191)
|+.. ++.+...... ...+.+..++|++|... . ..+.|.++..++.|+|.. .++|+++||
T Consensus 210 ~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vw 289 (341)
T 3os7_A 210 FWKQDSRNLPTGESFAPTGEQKEYLENGVAVASHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIW 289 (341)
T ss_dssp EEEECTTSCEEEEEECCCGGGGGGGTTCBCTTSSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEE
T ss_pred EEecCcccCCCCccccCCCccchhhcCCcccCCcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEE
Confidence 4421 1111100000 11222334688888743 2 357899988899999998 589999999
Q ss_pred CCccCCCCCCCCCCCCCCceEEecceec-------------CCCeEeCCCCEEEEEEEeC
Q psy17993 145 NPWDTGRDMKDFGDDEYPNMICVEAGHV-------------TSPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 145 np~~~~~~~~d~~~~~~~~fvCiEP~~~-------------~~~~~L~pGe~~~~~~~i~ 191 (191)
+|+. .++|||||||.. .+.+.|+|||+++.+++|+
T Consensus 290 t~~~------------~~~~vclEP~~~~pDa~n~~~~~~~~g~~~L~PGe~~~~~~~i~ 337 (341)
T 3os7_A 290 NDMG------------DKKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLY 337 (341)
T ss_dssp CGGG------------CSSEEEEEEESSCTTGGGCSSCHHHHCCEEECTTCEEEEEEEEE
T ss_pred cCCC------------CCCEEEECCccCCCCccCCCCcccccCceEECCCCEEEEEEEEE
Confidence 9862 358999999941 1368999999999999884
No 9
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4e-27 Score=196.33 Aligned_cols=172 Identities=14% Similarity=0.164 Sum_probs=126.7
Q ss_pred CCeEEEEEccC--C-CcccCCCcceEEEEEEEEeC--CceEEEEEEEeCCCCceeEEeeccceeEEeC------CCCceE
Q psy17993 9 LDAFCIFPYLD--I-FCIFPYFARFRLTYRLILRE--KELHFNIGVYNPSNDLAFNFNLLLHTYLKVP------DVRRCQ 77 (191)
Q Consensus 9 ~~~~~~~~l~~--~-~t~~~yP~~f~l~~~~~L~~--~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~------~~~~~~ 77 (191)
++.+|+|+|.+ . ++++.|||.|+++++|+|++ ++|+++++++|++++ +|||++|+||||+++ ++.+..
T Consensus 116 ~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~~~~~N~~d~-~~p~~~~~H~YFnl~~~~~~~~i~~~~ 194 (342)
T 1yga_A 116 GVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVRGD-ATPINMTNHSYFNLNKVKSEKSIRGTE 194 (342)
T ss_dssp TEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEEEEEESS-EEECBCEECCCBCTTTTTCTTCCTTEE
T ss_pred CCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEEEEEEEeCCCC-ceEEeeeccceEEcCCCCCCCcccceE
Confidence 45567888775 3 67888999999999999984 899999999999999 999999999999998 356777
Q ss_pred EeeCCCCeeeeccC-----CcceeeeecceE------EeCC---CCCeeEeCCC----------------CeEEEEEeCC
Q psy17993 78 VNGLYGCHYIDKVL-----DNQLFRETRETV------SVSS---LTDRIYQNTC----------------QEHVVTNVVS 127 (191)
Q Consensus 78 ~~gl~~~~~~d~~~-----~~~~~~~~~~~~------~~~~---~~D~iy~~~~----------------~~~~l~~~~~ 127 (191)
+. +.+..|++... .++........+ .+.. .+|++|.... ..++|.++..
T Consensus 195 l~-l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~ 273 (342)
T 1yga_A 195 VK-VCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPES 273 (342)
T ss_dssp EE-ESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSCCCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTT
T ss_pred EE-EeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCcccCCCCcEEEeCCCccccccccccccccceEEEEEeCCC
Confidence 76 55666765211 111111111122 3332 5899987542 2467888888
Q ss_pred CceEEEEEeCCCcEEEeCCccCCCCCCCCCCCCC--CceEEecceecC---------CCeEeCCCCEEEEEEEeC
Q psy17993 128 GRKMRLQKYNFPDTVIWNPWDTGRDMKDFGDDEY--PNMICVEAGHVT---------SPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 128 ~~~i~v~~~~~~~~vvWnp~~~~~~~~d~~~~~~--~~fvCiEP~~~~---------~~~~L~pGe~~~~~~~i~ 191 (191)
++.|.|..+ +|+++||+|+. + +++| ++||||||+... +.+.|+|||+++.+++|+
T Consensus 274 g~~l~v~~~-~p~~~vyt~~~-------~-~~~y~~~~~vclEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~ 339 (342)
T 1yga_A 274 HIKFEVSTT-EPTVHLYTGDN-------L-CGKFVPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYK 339 (342)
T ss_dssp CCEEEEEES-SSEEEEECCTT-------C-CTTSCTTSCBEEEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEE
T ss_pred CeEEEEEeC-CCEEEEECCCC-------c-cccCCCCCEEEEECCCCCCcccCCCCCCCeEECCCCEEEEEEEEE
Confidence 899999988 99999999862 1 1223 589999998522 138999999999998873
No 10
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=99.94 E-value=8.1e-26 Score=184.68 Aligned_cols=165 Identities=15% Similarity=0.196 Sum_probs=124.3
Q ss_pred CCeEEEEEccCCCcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCCCceEEeeCCCCeeee
Q psy17993 9 LDAFCIFPYLDIFCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDVRRCQVNGLYGCHYID 88 (191)
Q Consensus 9 ~~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~~~~~~~gl~~~~~~d 88 (191)
++.+|+|+|.++ + |||.|+++++|+|++++|+++++++|++++ +|||++|+||||++++...+++. +..|++
T Consensus 98 ~~~~v~l~l~~~---~-~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~-~~~~~~~~H~YFnl~~~~~l~i~---a~~~~~ 169 (291)
T 3nre_A 98 SDDSLCLVYEHR---S-GVYHYRVSQAFHLTADTLTVTLSVTNQGAE-TLPFGTGWHPYFPLSPQTRIQAQ---ASGYWL 169 (291)
T ss_dssp CSSEEEEEEEEE---S-SSCEEEEEEEEEECSSEEEEEEEEEECSSS-CEEECCEEEEEEECCTTCEEEEC---CSEEEE
T ss_pred cCCEEEEEEeCC---C-CCceEEEEEEEEEeCCeEEEEEEEEECCCC-CccceEEcCccEecCCCeEEEEE---CCEEEE
Confidence 345788988763 6 999999999999999999999999999999 99999999999999875555554 345554
Q ss_pred c----cCCcceeeeecceEEeC-------CCCCeeEeCCCCeEEEEEeCCCceEEEEEeCC-CcEEEeCCc-cCCCCCCC
Q psy17993 89 K----VLDNQLFRETRETVSVS-------SLTDRIYQNTCQEHVVTNVVSGRKMRLQKYNF-PDTVIWNPW-DTGRDMKD 155 (191)
Q Consensus 89 ~----~~~~~~~~~~~~~~~~~-------~~~D~iy~~~~~~~~l~~~~~~~~i~v~~~~~-~~~vvWnp~-~~~~~~~d 155 (191)
. ++.+... ..+..++|. ..+|++|......++|.++..++.|+|..+.- +.++||+|+ ..
T Consensus 170 ~d~~~iPtg~~~-v~~t~~df~~~~~l~~~~~D~~f~~~~~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~~------ 242 (291)
T 3nre_A 170 EREQWLAGEFCE-QLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF------ 242 (291)
T ss_dssp ECGGGCEEEEES-SCCGGGCCSSCEECCSSCEEEEEESCCSEEEEEEGGGTEEEEEEEESCCSEEEEEECCTTT------
T ss_pred cCCCcCCCcccc-CCCCcccccCCcCCCCccccceeecCCccEEEEECCCCeEEEEEeCCCCceEEEEcCCCCC------
Confidence 2 2221111 112234443 24899998776778899988899999987753 258999997 21
Q ss_pred CCCCCCC-ceEEeccee-c----C-----CCeEeCCCCEEEEEEEe
Q psy17993 156 FGDDEYP-NMICVEAGH-V----T-----SPVLLHPGTTFEASQIL 190 (191)
Q Consensus 156 ~~~~~~~-~fvCiEP~~-~----~-----~~~~L~pGe~~~~~~~i 190 (191)
...|+ .||||||++ . + +.+.|+|||+++.+++|
T Consensus 243 --~~~~~~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~~~ 286 (291)
T 3nre_A 243 --DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSL 286 (291)
T ss_dssp --CTTCCSCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEEEE
T ss_pred --CCCccCCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEEEE
Confidence 12355 899999995 2 1 25899999999998876
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=99.93 E-value=9.1e-26 Score=188.34 Aligned_cols=176 Identities=16% Similarity=0.185 Sum_probs=122.4
Q ss_pred eEEEEEccCCCcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCC-----CCceEEeeCCCCe
Q psy17993 11 AFCIFPYLDIFCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-----VRRCQVNGLYGCH 85 (191)
Q Consensus 11 ~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-----~~~~~~~gl~~~~ 85 (191)
.+|+|+|.+.++.+.|||.|+++++|+|++++|+++++++| ++ +|||++|+||||+++. +.+..+. +.+..
T Consensus 127 ~~v~l~l~~~~~~~gyP~~~~~~vty~L~~~~L~i~~~a~~--d~-~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~ 202 (344)
T 1snz_A 127 NGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNYRAQA--SQ-ATPVNLTNHSYFNLAGQASPNINDHEVT-IEADT 202 (344)
T ss_dssp TEEEEEEEECTTGGGCCSCEEEEEEEEEETTEEEEEEEEEE--SS-CEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEE
T ss_pred CEEEEEEECCCcCCCCCEEEEEEEEEEEcCCEEEEEEEEEe--CC-ceEEeccccceEecCCCCCCcccCEEEE-EECCe
Confidence 46888887665678999999999999999889999999998 78 9999999999999984 4555655 33445
Q ss_pred eeecc----CCcceeeeecceEEeCC--------------CCCeeEeCCC-----CeEEEEEeCCCceEEEEEeCCCcEE
Q psy17993 86 YIDKV----LDNQLFRETRETVSVSS--------------LTDRIYQNTC-----QEHVVTNVVSGRKMRLQKYNFPDTV 142 (191)
Q Consensus 86 ~~d~~----~~~~~~~~~~~~~~~~~--------------~~D~iy~~~~-----~~~~l~~~~~~~~i~v~~~~~~~~v 142 (191)
|++.. +.++.....+..++|.. ++|++|.... ..++|.++..++.|+|..+ +|.++
T Consensus 203 ~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~ 281 (344)
T 1snz_A 203 YLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQ 281 (344)
T ss_dssp ECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEE
T ss_pred EEEeCCCCcccCceecCCCCcccccCCcCcChhhcccccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEE
Confidence 55422 21211111112233332 3788886421 2477888888899999988 99999
Q ss_pred EeCCccCCCCCCCCCCCCC--CceEEecceecC--------CCeEeCCCCEEEEEEEeC
Q psy17993 143 IWNPWDTGRDMKDFGDDEY--PNMICVEAGHVT--------SPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 143 vWnp~~~~~~~~d~~~~~~--~~fvCiEP~~~~--------~~~~L~pGe~~~~~~~i~ 191 (191)
||+|......+.+.....| ++|||||||... ..+.|+|||+++.+++|+
T Consensus 282 vyt~~~~~~~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~~~~~L~pGe~~~~~~~~~ 340 (344)
T 1snz_A 282 FYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFK 340 (344)
T ss_dssp EECCTTCEEEEECGGGCEEETTSCBEEEEESCTTGGGCTTSCCCEECTTSCEEEEEEEE
T ss_pred EECCCCCCccccCCCCcccCCCCEEEEeCcCCCCcccCCCCCCeEECCCCEEEEEEEEE
Confidence 9998421000111111112 589999999531 248999999999988763
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.90 E-value=5.4e-23 Score=171.27 Aligned_cols=172 Identities=11% Similarity=0.062 Sum_probs=119.3
Q ss_pred CeEEEEEccCCCcccCCCcceEEEEEEEEe-CCceEEEEEEEeCCCCceeEEeeccceeEEeCC---CCceEEeeCCCCe
Q psy17993 10 DAFCIFPYLDIFCIFPYFARFRLTYRLILR-EKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD---VRRCQVNGLYGCH 85 (191)
Q Consensus 10 ~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~-~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~---~~~~~~~gl~~~~ 85 (191)
+.+|+|+|.+.++.+.|||.|+++++|+|+ +++|++++++ ++++ +|||++|+||||+++. +.+..+. +....
T Consensus 119 ~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a--~~d~-~tp~~lg~HpYFnl~~~~~i~~~~L~-i~a~~ 194 (339)
T 1lur_A 119 PESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHA--TCDT-PGLLALTNHAYWNLDGSDTVAEHFLE-MEADE 194 (339)
T ss_dssp TTEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEE--ECSS-CEECBCEECCEECSSCCSCSTTCEEE-ECEEE
T ss_pred CCEEEEEEECCCcCCCCCeEEEEEEEEEECCCCeEEEEEEE--eCCC-CeEEeeeccceEECCCCCcccCEEEE-EECCE
Confidence 457889887665568999999999999998 5899999999 4889 9999999999999984 4565554 33444
Q ss_pred eeecc----CCcceeeeec------ceEEeCC---------CCCeeEeCC---C-----CeEEEEEeCCCceEEEEEeCC
Q psy17993 86 YIDKV----LDNQLFRETR------ETVSVSS---------LTDRIYQNT---C-----QEHVVTNVVSGRKMRLQKYNF 138 (191)
Q Consensus 86 ~~d~~----~~~~~~~~~~------~~~~~~~---------~~D~iy~~~---~-----~~~~l~~~~~~~~i~v~~~~~ 138 (191)
|+... +.++.....+ ....+.. .+|..|... . ..++|.++..++.|.|..+ +
T Consensus 195 ~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~ 273 (339)
T 1lur_A 195 FVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-Y 273 (339)
T ss_dssp EEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-S
T ss_pred EEEeCCCCccCCCEEccCCCcccccCceecCchhcccccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-C
Confidence 55321 1111000001 1223332 578777532 2 2478888888899999887 9
Q ss_pred CcEEEeCCccCCCCCCCC-CCCC----CCceEEecceecC--------CCeEeCCCCEEEEEEEeC
Q psy17993 139 PDTVIWNPWDTGRDMKDF-GDDE----YPNMICVEAGHVT--------SPVLLHPGTTFEASQILQ 191 (191)
Q Consensus 139 ~~~vvWnp~~~~~~~~d~-~~~~----~~~fvCiEP~~~~--------~~~~L~pGe~~~~~~~i~ 191 (191)
|.++||+|+.. +. +.++ .+.|||||||... ..+.|+|||+++.+++|+
T Consensus 274 p~~~vyt~~~~-----~~~g~~g~~y~~~~~vclEp~~~pDa~n~~~~~~~~L~pGe~~~~~~~~~ 334 (339)
T 1lur_A 274 PVIHLYASKFL-----DCKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYT 334 (339)
T ss_dssp SEEEEECCTTC-----CEECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEE
T ss_pred CEEEEECCCCc-----cccCCCCcccCCCCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEE
Confidence 99999998521 10 0001 2469999999731 238999999999888763
No 13
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.89 E-value=4.6e-22 Score=179.10 Aligned_cols=169 Identities=12% Similarity=0.089 Sum_probs=120.9
Q ss_pred eEEEEEccCCCcccCCCcceEEEEEEEEe--CCceEEEEEEEeCCCCceeEEeeccceeEEeCC-----CCceEEeeCCC
Q psy17993 11 AFCIFPYLDIFCIFPYFARFRLTYRLILR--EKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-----VRRCQVNGLYG 83 (191)
Q Consensus 11 ~~~~~~l~~~~t~~~yP~~f~l~~~~~L~--~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-----~~~~~~~gl~~ 83 (191)
++++|.|.+++..+.|||.|+++++|+|+ +++|+++++++|++++ +|||++|+||||+++. +.+..+. +..
T Consensus 482 ~~~~~~~~~~~~~~gyP~~~~~~v~y~L~~~~~~L~i~~~~~n~~~~-~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a 559 (699)
T 1z45_A 482 FTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLTAGE-ATPINLTNHSYFNLNKPYGDTIEGTEIM-VRS 559 (699)
T ss_dssp EEEEEEEEECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEEEEEESS-EEECBCEECCEECTTTTSCSSSTTEEEE-ESC
T ss_pred ceEEEEEECCCcCCCCCceEEEEEEEEEecCCCEEEEEEEEEecCCC-CceecccccceEeecCCCCCCccccEEE-Eec
Confidence 47999998873388999999999999999 8999999999999999 9999999999999983 4556664 444
Q ss_pred CeeeeccCC----cceeeeecceEEe------C---CCCCeeEeCCC---------------CeEEEEEeCCCceEEEEE
Q psy17993 84 CHYIDKVLD----NQLFRETRETVSV------S---SLTDRIYQNTC---------------QEHVVTNVVSGRKMRLQK 135 (191)
Q Consensus 84 ~~~~d~~~~----~~~~~~~~~~~~~------~---~~~D~iy~~~~---------------~~~~l~~~~~~~~i~v~~ 135 (191)
..|+..... ++.....+..++| . ..+|..|.... ..++|.++..++.|.|..
T Consensus 560 ~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~ 639 (699)
T 1z45_A 560 KKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLS 639 (699)
T ss_dssp CEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEE
T ss_pred CeEEecCCCCCCCCCcccCcCCCcccCCcccccccCCCCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEE
Confidence 456542211 1100000111112 1 25788886432 136788888888999887
Q ss_pred eCCCcEEEeCCccCCCCCCCCCCCCC--CceEEecceecC---------CCeEeCCCCEEEEEEEe
Q psy17993 136 YNFPDTVIWNPWDTGRDMKDFGDDEY--PNMICVEAGHVT---------SPVLLHPGTTFEASQIL 190 (191)
Q Consensus 136 ~~~~~~vvWnp~~~~~~~~d~~~~~~--~~fvCiEP~~~~---------~~~~L~pGe~~~~~~~i 190 (191)
+ +|.++||++... ++++ ++|||||||... +.+.|+|||+++.++++
T Consensus 640 ~-~p~~~~yt~~~~--------~~~~~~~~~~clEp~~~pda~n~~~~~~~~~L~pge~~~~~~~~ 696 (699)
T 1z45_A 640 T-EPTYQFYTGDFL--------SAGYEARQGFAIEPGRYIDAINQENWKDCVTLKNGETYGSKIVY 696 (699)
T ss_dssp S-SSEEEEECCTTC--------CTTCCTTSCEEEEEESCSSGGGCTTTGGGGEEETTCEEEEEEEE
T ss_pred C-CCEEEEEeCCCC--------CCCCCCCCEEEEecCCCCCccCcccCCCCcEECCCCEEEEEEEE
Confidence 6 899999997421 1112 579999999521 13799999999988775
No 14
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.86 E-value=2.8e-21 Score=161.36 Aligned_cols=169 Identities=12% Similarity=0.129 Sum_probs=112.0
Q ss_pred EEEEEccCCCcccCCCcceEEEEEEEEe-CCceEEEEEEEeCCCCceeEEeeccceeEEeCC-----CCceEEeeCCCCe
Q psy17993 12 FCIFPYLDIFCIFPYFARFRLTYRLILR-EKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-----VRRCQVNGLYGCH 85 (191)
Q Consensus 12 ~~~~~l~~~~t~~~yP~~f~l~~~~~L~-~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-----~~~~~~~gl~~~~ 85 (191)
+|+|+|.+.++.+.|||.|+++++|+|+ +++|+++++++ +++ +|||++|.||||+++. +.+..+. +....
T Consensus 119 ~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~d~-~tp~nlg~HpYFnl~g~~~~~i~~~~L~-i~a~~ 194 (347)
T 1nsx_A 119 QVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI--SDK-DTVFNPTGNVYFNLNGDASESVENHGLR-LAASR 194 (347)
T ss_dssp EEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--ESS-CEECBCEECCEECTTSSTTSCGGGSEEE-ECEEE
T ss_pred EEEEEEECCCccCCCCeEEEEEEEEEECCCCeEEEEEEEE--cCC-CeEEeeeccceEecCCCCCCceeceEEE-EECCe
Confidence 7899998666788999999999999998 58999999998 788 9999999999999974 2344443 22223
Q ss_pred eee----c-cCCcceeeeecceEEeC-------------------CCCCeeEeCC-----CCeEEEEEeCCCceEEEEEe
Q psy17993 86 YID----K-VLDNQLFRETRETVSVS-------------------SLTDRIYQNT-----CQEHVVTNVVSGRKMRLQKY 136 (191)
Q Consensus 86 ~~d----~-~~~~~~~~~~~~~~~~~-------------------~~~D~iy~~~-----~~~~~l~~~~~~~~i~v~~~ 136 (191)
|+. . ++.++.....+..++|. ...|..|... ...++|.+ .++.+.|..+
T Consensus 195 ~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~ 272 (347)
T 1nsx_A 195 FVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD 272 (347)
T ss_dssp ECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHHHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES
T ss_pred EEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhhhcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC
Confidence 331 1 22221111001111221 1467767532 12467776 6788988876
Q ss_pred CCCcEEEeCCcc-CC---CCCCCCCCCCCCceEEecceecC--------CCeEeCCCCEEEEEEEe
Q psy17993 137 NFPDTVIWNPWD-TG---RDMKDFGDDEYPNMICVEAGHVT--------SPVLLHPGTTFEASQIL 190 (191)
Q Consensus 137 ~~~~~vvWnp~~-~~---~~~~d~~~~~~~~fvCiEP~~~~--------~~~~L~pGe~~~~~~~i 190 (191)
+|.++||++.. .. +.-..+ ..+.+||||||... ..+.|+|||+++.++++
T Consensus 273 -~p~lqvyt~~~~~~g~~~~g~~~---~~~~~vclEpq~~pDa~n~~~~~~~~L~pGe~~~~~~~~ 334 (347)
T 1nsx_A 273 -QPSIVIFTANFGDLGTLYHEKKQ---VHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIY 334 (347)
T ss_dssp -SSEEEEECCCCTTCCCEETTEEC---CTTCCEECEEESCTTTTTCGGGCCCEECTTCEEEEEEEE
T ss_pred -CCEEEEECCCCCccccccCCccc---CCcCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEE
Confidence 99999999742 10 000000 01356999999631 24899999999988775
No 15
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.77 E-value=1e-17 Score=139.09 Aligned_cols=175 Identities=15% Similarity=0.155 Sum_probs=113.0
Q ss_pred cCCCeEEEEEccCCCcccCCCcceEEEEEEEEeC-CceEEEEEEEeCCCCceeEEeeccceeEEeCC-CCceEEeeCCCC
Q psy17993 7 ATLDAFCIFPYLDIFCIFPYFARFRLTYRLILRE-KELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD-VRRCQVNGLYGC 84 (191)
Q Consensus 7 ~~~~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~-~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~-~~~~~~~gl~~~ 84 (191)
++++.+|+|+|.+.+..+.|||.|+++++|+|++ ++|+++++++ +++ +|||++|.||||+++. +.+..+. +...
T Consensus 119 ~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~d~-~tp~nlg~HpYFnL~g~i~~~~L~-i~a~ 194 (338)
T 3imh_A 119 DSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAV--SDK-LTIFNPVNHTYFNLGERAEDLNLQ-MNAD 194 (338)
T ss_dssp CSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--ESS-SEECBCEECCEECTTSCGGGCEEE-ECEE
T ss_pred ecCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEe--cCC-CeEEEEeeCCEEeCCCCcCCeEEE-EEcC
Confidence 3456789999986656789999999999999997 6799999998 788 9999999999999973 4444443 2222
Q ss_pred eeee----ccCCcceeeeecceEEeC-------------------CCCCeeEeCCC--CeEEEEEeCCCceEEEEEeCCC
Q psy17993 85 HYID----KVLDNQLFRETRETVSVS-------------------SLTDRIYQNTC--QEHVVTNVVSGRKMRLQKYNFP 139 (191)
Q Consensus 85 ~~~d----~~~~~~~~~~~~~~~~~~-------------------~~~D~iy~~~~--~~~~l~~~~~~~~i~v~~~~~~ 139 (191)
.|+. .++.++.....+..++|. ...|..|.... ..++|.+ .++.+.|.. +.|
T Consensus 195 ~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~Dh~f~l~~~~~~a~l~~--sg~~l~v~t-~~p 271 (338)
T 3imh_A 195 YYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGNNPAALLSS--NKHRLIVKT-NAP 271 (338)
T ss_dssp EECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCEEEEEECSCSCSEEEEC--SSEEEEEEE-SSS
T ss_pred cEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCCCCceeecCCceEEEEEC--CCeEEEEEe-CCC
Confidence 3332 122221111111122232 24788776322 2356653 678888764 468
Q ss_pred cEEEeCCcc-CCCCCCCCCCCCCCceEEecceecC----C--CeEeCCCCEEEEEEEe
Q psy17993 140 DTVIWNPWD-TGRDMKDFGDDEYPNMICVEAGHVT----S--PVLLHPGTTFEASQIL 190 (191)
Q Consensus 140 ~~vvWnp~~-~~~~~~d~~~~~~~~fvCiEP~~~~----~--~~~L~pGe~~~~~~~i 190 (191)
.++|+++.. .... .. ..-..+..|||||.... + .+.|+|||+++.+...
T Consensus 272 ~~q~YTgn~l~~~g-~g-~~~~~~~g~clE~q~~P~n~~~f~~~vL~pGe~y~~~t~y 327 (338)
T 3imh_A 272 ALVLYAGNHFNHTG-IV-NNIGQYDGITFEAQCPPAEGNDLGQITLLPFEKFKRTVDW 327 (338)
T ss_dssp EEEEECCTTCCSBT-TB-TTCCTTSCEECEEESCCCSSSCCGGGEECTTCCEEEEEEE
T ss_pred EEEEeCCCCcCCCC-CC-cccCccCEEEEEccCCCCCCCCCCCeEECCCCEEEEEEEE
Confidence 999999753 1110 00 00012468999998531 2 3899999998876653
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.74 E-value=1.9e-17 Score=139.74 Aligned_cols=168 Identities=11% Similarity=0.079 Sum_probs=109.4
Q ss_pred eEEEEEccCC-CcccCCCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeCCC-CceEEeeCCCCeeee
Q psy17993 11 AFCIFPYLDI-FCIFPYFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVPDV-RRCQVNGLYGCHYID 88 (191)
Q Consensus 11 ~~~~~~l~~~-~t~~~yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~~-~~~~~~gl~~~~~~d 88 (191)
..++++.... .+...|||.++.+++|+|.+++|+++.+|+|.|++ +|||++|+||||..|.. +++++. +.......
T Consensus 157 ~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g~~-p~P~~~~~H~nfg~Pll~~g~rl~-~p~~~~~p 234 (384)
T 3ty1_A 157 YEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADY-PHDYQIIYHSNFGTPILEEGARFL-APISSISP 234 (384)
T ss_dssp CCEEEEEEEEEEETTTEEEEEEEEEEECTTCSEEEEEEEEEECSSS-CEEEEEEEEEEECTTTCCTTCEEE-CCEEEEEE
T ss_pred eEEEEEEEEEEeeeccCCEEEEEEEEEEeCCCEEEEEEEEEECCCC-CCchheecccccCCCccCCCcEEE-eccceecc
Confidence 4455555444 46678999999999999999999999999999999 99999999999998743 455554 22222221
Q ss_pred ccCCcceeeeecceE--EeCCCCCeeEe-C----CCCe--EEEEEeCCCceEEEEE--eCCCcEEEeCCccCCCCCCCCC
Q psy17993 89 KVLDNQLFRETRETV--SVSSLTDRIYQ-N----TCQE--HVVTNVVSGRKMRLQK--YNFPDTVIWNPWDTGRDMKDFG 157 (191)
Q Consensus 89 ~~~~~~~~~~~~~~~--~~~~~~D~iy~-~----~~~~--~~l~~~~~~~~i~v~~--~~~~~~vvWnp~~~~~~~~d~~ 157 (191)
...........-... +...-.+.+|. + ..+. +.|.++..+..+.+.+ +.||++++|.... .
T Consensus 235 ~~~~~~~~l~~~~~~~~p~~~~~E~vf~~d~~~d~~G~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~-~------- 306 (384)
T 3ty1_A 235 FNDYAKSGLKTWQTYQGPTKDFDEMVFNIQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTD-T------- 306 (384)
T ss_dssp SSGGGGGGSTTTTBCCCCCTTCCCEEEEEEECCCTTSEEEEEEECSSSSCEEEEEEETTTSCEEEEEEEES-C-------
T ss_pred ccccccccccchhhccCCCCCCCceEEEEeccccCCCceEEEEEecCCCcEEEEEEchHHCCHhHhhcccC-C-------
Confidence 110000000000000 00011244553 2 1233 6688777788898887 4689999998621 0
Q ss_pred CCCCCceE-Eecceec-----------CCCeEeCCCCEEEEEEEe
Q psy17993 158 DDEYPNMI-CVEAGHV-----------TSPVLLHPGTTFEASQIL 190 (191)
Q Consensus 158 ~~~~~~fv-CiEP~~~-----------~~~~~L~pGe~~~~~~~i 190 (191)
+ + +.|+ |||||+. ..++.|+|||+++.+++|
T Consensus 307 ~-~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~~~i 349 (384)
T 3ty1_A 307 V-K-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTY 349 (384)
T ss_dssp T-T-TCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEEEEE
T ss_pred C-C-CccEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEEEEE
Confidence 0 1 2386 9999963 137999999999999887
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=89.38 E-value=0.27 Score=32.79 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=24.6
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeEE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLK 69 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~ 69 (191)
.++|..+.=+++++|+|+|+. |.+.|-|-.|.
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDR---PIQVGSHyHF~ 43 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDR---PIQVGSHYHFA 43 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSS---CEEEETTSCGG
T ss_pred cEEEcCCCCEEEEEEEeCCCc---ceEEccccChh
Confidence 356777778999999999987 66777776663
No 18
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=86.02 E-value=0.43 Score=33.15 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=24.6
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeEE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLK 69 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~ 69 (191)
.++|..+.=+++++|+|+|+. |.++|-|-.|.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR---PIQVGSHyHF~ 49 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDR---PIQVGSHIHFV 49 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS---CEEEETTSCGG
T ss_pred CEEeCCCCcEEEEEEEeCCCC---CEEEccccchh
Confidence 356767778999999999987 66777776663
No 19
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=86.02 E-value=0.43 Score=33.15 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=24.6
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeEE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLK 69 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~ 69 (191)
.++|..+.=+++++|+|+|+. |.++|-|-.|.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR---PIQVGSHyHF~ 49 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDR---PIQVGSHIHFV 49 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS---CEEEETTSCGG
T ss_pred CEEeCCCCcEEEEEEEeCCCC---CEEEccccchh
Confidence 356767778999999999987 66777776663
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.87 E-value=3.5 Score=28.49 Aligned_cols=32 Identities=25% Similarity=0.457 Sum_probs=25.6
Q ss_pred eEEEEEEEEeCCceEEEEEEEeCCCCceeEEee
Q psy17993 30 FRLTYRLILREKELHFNIGVYNPSNDLAFNFNL 62 (191)
Q Consensus 30 f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~ 62 (191)
..+++++.-.++.+.+.++|+|.+++ +..+.+
T Consensus 7 l~~~v~~~~~g~~v~~~ltv~N~s~~-~v~l~f 38 (120)
T 3isy_A 7 VVLSIDAIQEPEQIKFNMSLKNQSER-AIEFQF 38 (120)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECSSS-CEEEEE
T ss_pred EEEEEeeccCCCeEEEEEEEEcCCCC-cEEEEe
Confidence 45566666678899999999999999 777665
No 21
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=73.62 E-value=3.6 Score=33.88 Aligned_cols=29 Identities=7% Similarity=0.178 Sum_probs=24.9
Q ss_pred EEEEEEEeCCceEEEEEEEeCCCCceeEEe
Q psy17993 32 LTYRLILREKELHFNIGVYNPSNDLAFNFN 61 (191)
Q Consensus 32 l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~ 61 (191)
...+|++-+.+|+++++|+|.+++ +...+
T Consensus 255 ~~A~Y~vpgR~l~~~~~VtN~g~~-pvrlg 283 (382)
T 1yew_A 255 EDATYRVPGRAMRMKLTITNHGNS-PIRLG 283 (382)
T ss_dssp EEEEEESSCSEEEEEEEEEECSSS-CEEEE
T ss_pred eccEEecCCcEEEEEEEEEcCCCC-ceEee
Confidence 345899989999999999999999 77655
No 22
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=72.29 E-value=3.4 Score=34.34 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=24.4
Q ss_pred EEEEEEeCCceEEEEEEEeCCCCceeEEe
Q psy17993 33 TYRLILREKELHFNIGVYNPSNDLAFNFN 61 (191)
Q Consensus 33 ~~~~~L~~~~L~~~l~v~N~~~~~~m~f~ 61 (191)
..+|++-+.+|+++++|+|.|++ +..++
T Consensus 290 ~A~Y~vpgR~l~~~~~VtN~g~~-pvrlg 317 (419)
T 3rfr_A 290 GGVYKVPGRELTINVKVKNGTSQ-PVRLG 317 (419)
T ss_dssp EEEEESSSSEEEEEEEEECCSSS-CBEEE
T ss_pred ceEEecCCcEEEEEEEEecCCCC-ceEEe
Confidence 45889989999999999999999 87654
No 23
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=71.86 E-value=1.5 Score=33.40 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=24.3
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeEE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLK 69 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~ 69 (191)
.+.|..+.=++++.|+|+|+. |.+.|-|-.|.
T Consensus 117 ~I~lN~gr~~~~l~V~NtGDR---PIQVGSHyHF~ 148 (225)
T 3qga_A 117 DIELNAGKEITELKVTNKGPK---SLHVGSHFHFF 148 (225)
T ss_dssp CEETTTTCCCEEEEEEECSSS---CEEEETTSCGG
T ss_pred ceecCCCCceEEEEEEECCCC---ceeeccccchh
Confidence 356666677899999999987 66777776663
No 24
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.76 E-value=8.5 Score=26.05 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=33.3
Q ss_pred EEEEEEEEeCCceEEEEEEEeCCCCceeEEeeccceeEEeC
Q psy17993 31 RLTYRLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLKVP 71 (191)
Q Consensus 31 ~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~ 71 (191)
.+..-+..-+..-+..+.++|.|+. +..|.+-..+.|.+.
T Consensus 31 ~l~fg~~~v~~~~~~~~~l~N~g~~-~~~f~~~~~~~F~i~ 70 (122)
T 2ys4_A 31 KLNFSTCPVKYSTQKILLVRNIGNK-NAVFHIKTCRPFSIE 70 (122)
T ss_dssp EECCCSEESSSCEEEEEEEECCSSS-CEEEEEECCTTEEEE
T ss_pred eeecCCeecCCeEEEEEEEEECCCC-CEEEEEecCCCeEEE
Confidence 4555666677889999999999999 999999888888874
No 25
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=57.25 E-value=4.5 Score=31.07 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=24.0
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeEE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYLK 69 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF~ 69 (191)
.+.|..+.=++++.|+|+|+. |.+.|-|-.|.
T Consensus 117 ~I~lN~gr~~~~l~V~NtGDR---PIQVGSHyHF~ 148 (238)
T 1e9y_A 117 DITINEGKKAVSVKVKNVGDR---PVQIGSHFHFF 148 (238)
T ss_dssp EEETTTTCCCCEEEEEECSSS---CEEEETTSCGG
T ss_pred CeeeCCCCCeEEEEEEeCCCC---ceEeccccchH
Confidence 366666667899999999987 56677776663
No 26
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=55.13 E-value=7.6 Score=35.65 Aligned_cols=31 Identities=13% Similarity=0.027 Sum_probs=24.3
Q ss_pred EEEEeCCceEEEEEEEeCCCCceeEEeeccceeE
Q psy17993 35 RLILREKELHFNIGVYNPSNDLAFNFNLLLHTYL 68 (191)
Q Consensus 35 ~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~HpyF 68 (191)
.+.|..+.=+++|+|+|+|++ |.++|-|-.|
T Consensus 143 ~~~~~~~~~~~~~~v~~~~~r---~~~v~sh~hf 173 (840)
T 4gy7_A 143 CLTLNIGRKAVILKVTSKGDR---PIQVGSHYHF 173 (840)
T ss_dssp EEECSCSCEEEEEEEEECCSS---CEEEETTSCG
T ss_pred ceEecCCCceEEEEEEeCCCC---ceEeccccch
Confidence 567777788999999999987 5666666555
No 27
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=53.18 E-value=51 Score=25.59 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=23.8
Q ss_pred ceEEEEEEEEeCCc--eEEEEEEEeCCCCceeEEe
Q psy17993 29 RFRLTYRLILREKE--LHFNIGVYNPSNDLAFNFN 61 (191)
Q Consensus 29 ~f~l~~~~~L~~~~--L~~~l~v~N~~~~~~m~f~ 61 (191)
...++.+|+|..+. +.++++|.|.+.. ++...
T Consensus 103 G~~~~ktytf~~~~Y~i~v~~~v~N~s~~-~~~~~ 136 (280)
T 3bs6_A 103 GNTFTKTFVLKRGDYAVNVNYNVQNAGEK-PLEIS 136 (280)
T ss_dssp CCEEEEEEEEETTCCEEEEEEEEECCSSS-CEEEE
T ss_pred CeEEEEEEEEcCCceEEEEEEEEEcCCCC-ceeEe
Confidence 36788888897544 6777888899988 76554
No 28
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=46.98 E-value=18 Score=26.64 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=22.2
Q ss_pred CCCcEEEeCCccCCCCCCCCCCCCCCceEEecceecCCCeEeCCCCEEE
Q psy17993 137 NFPDTVIWNPWDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLHPGTTFE 185 (191)
Q Consensus 137 ~~~~~vvWnp~~~~~~~~d~~~~~~~~fvCiEP~~~~~~~~L~pGe~~~ 185 (191)
+.+...+|||| |..+.|+-+-+ ..+.|.+|..++
T Consensus 142 ~~~~y~~WNPW-------------~~~~~~~~a~S--~~i~l~~g~~y~ 175 (183)
T 1pxv_A 142 DQEKLIYWNPW-------------DTELSIQDADS--SLLHLSFNRDYN 175 (183)
T ss_dssp TEEEEEEECTT-------------CSSCEEEETTC--CEEEEGGGEEEE
T ss_pred CCeEEEEeCCc-------------cCCcEeecCCC--CeEEecCCCeeE
Confidence 55789999999 45777776531 236665555444
No 29
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=45.20 E-value=9.4 Score=35.06 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=22.9
Q ss_pred ccCCCcceEEEE-E-------EEEeCCceEEEEEEEeCC-CC
Q psy17993 23 IFPYFARFRLTY-R-------LILREKELHFNIGVYNPS-ND 55 (191)
Q Consensus 23 ~~~yP~~f~l~~-~-------~~L~~~~L~~~l~v~N~~-~~ 55 (191)
.-.|||-|=|.| + .+++++.++++.+|+|+| +.
T Consensus 709 ~plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~ 750 (845)
T 3abz_A 709 KVAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKF 750 (845)
T ss_dssp CCSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSC
T ss_pred ceeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCC
Confidence 357998875433 1 223367899999999999 54
No 30
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=45.04 E-value=11 Score=27.58 Aligned_cols=35 Identities=20% Similarity=0.537 Sum_probs=21.9
Q ss_pred eCCCcEEEeCCccCCCCCCCCCCCCCCceEEecceecCCCeEeCCCCEEE
Q psy17993 136 YNFPDTVIWNPWDTGRDMKDFGDDEYPNMICVEAGHVTSPVLLHPGTTFE 185 (191)
Q Consensus 136 ~~~~~~vvWnp~~~~~~~~d~~~~~~~~fvCiEP~~~~~~~~L~pGe~~~ 185 (191)
.|.+...+|||| |..+.|+-+- ...+.|.-|..++
T Consensus 132 ng~~~y~~WNPW-------------~~~~~~~s~~--s~~i~l~~g~~y~ 166 (174)
T 1cv8_A 132 NGQEVIIIWNPW-------------DNGFMTQDAK--NNVIPVSNGDHYQ 166 (174)
T ss_dssp TSCEEEEEECTT-------------CSSCEEEETT--CCEEECTTSCEEE
T ss_pred CCceEEEEeCCc-------------cCCcEEecCC--CCeEEecCCCeeE
Confidence 356889999999 4567777662 1235554444443
No 31
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=43.74 E-value=1.4e+02 Score=26.81 Aligned_cols=55 Identities=9% Similarity=0.058 Sum_probs=38.8
Q ss_pred CeEEEEEccCCCcccCCCcceEEEEEEEEeC--CceEEEEEEEeCCCCceeEEeeccceeEEeC
Q psy17993 10 DAFCIFPYLDIFCIFPYFARFRLTYRLILRE--KELHFNIGVYNPSNDLAFNFNLLLHTYLKVP 71 (191)
Q Consensus 10 ~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~--~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~ 71 (191)
...+++.|.+. . ...++.+.|++.+ +-++...+|+|++++ ++...-..=..+.++
T Consensus 134 ~~~l~i~l~D~----~--~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~-~~~l~~~~s~~l~~p 190 (732)
T 2xn2_A 134 AQTLIVTLEDK----V--SKLEYDLLYTIYRDRPVIVRSVQVHNHGEE-AVYLEKVASMQMDYV 190 (732)
T ss_dssp EEEEEEEEEET----T--TTEEEEEEEEEETTSSEEEEEEEEEECSSS-CEEEEEEEEEEEEES
T ss_pred CcEEEEEEEeC----C--CCEEEEEEEEEECCCCEEEEEEEEEECcCC-cEEEeEEeeccccCC
Confidence 34677888764 2 3568888898876 468889999999998 766555444344554
No 32
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=43.71 E-value=42 Score=29.83 Aligned_cols=38 Identities=13% Similarity=0.008 Sum_probs=30.3
Q ss_pred CCcceEEEEEEEEeCCceEEEEEEEeCCCCceeEEeecc
Q psy17993 26 YFARFRLTYRLILREKELHFNIGVYNPSNDLAFNFNLLL 64 (191)
Q Consensus 26 yP~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~f~~g~ 64 (191)
.++...|+=+|+|..++|.+.++++|.++. ++.|+.=+
T Consensus 539 ~~~~~~l~K~~~~~~~~~~v~y~~~~~~~~-~~~~~~E~ 576 (659)
T 1k1x_A 539 EKIPARVEKKIELTEDGFIAKYRVLLEKPY-KALFGVEI 576 (659)
T ss_dssp SEEEEEEEEEEEEETTEEEEEEEEEESSCC-CEEEEEEE
T ss_pred CCcceEEEEEEEEcCCEEEEEEEEeeCCCC-ceEEEEEE
Confidence 355788888999999999999999998876 66655433
No 33
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.87 E-value=65 Score=20.75 Aligned_cols=24 Identities=17% Similarity=0.236 Sum_probs=20.4
Q ss_pred EeCCceEEEEEEEeCCCCceeEEee
Q psy17993 38 LREKELHFNIGVYNPSNDLAFNFNL 62 (191)
Q Consensus 38 L~~~~L~~~l~v~N~~~~~~m~f~~ 62 (191)
.-+...+.+++++|+|+. ++.|.+
T Consensus 23 ~~g~~~~~~~~l~N~g~~-p~~~~~ 46 (112)
T 2e6j_A 23 FTGSAHCYEAILYNKGSI-DALFNM 46 (112)
T ss_dssp ESSCCEEEEEEEEECCSS-CEEEEE
T ss_pred EECCEEEEEEEEEECCcc-eEEEEE
Confidence 346678889999999999 999987
No 34
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=42.81 E-value=74 Score=28.55 Aligned_cols=55 Identities=9% Similarity=0.016 Sum_probs=39.4
Q ss_pred CeEEEEEccCCCcccCCCcceEEEEEEEEeC--CceEEEEEEEeCCCCceeEEeeccceeEEeC
Q psy17993 10 DAFCIFPYLDIFCIFPYFARFRLTYRLILRE--KELHFNIGVYNPSNDLAFNFNLLLHTYLKVP 71 (191)
Q Consensus 10 ~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~--~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~ 71 (191)
...+++.|.+. . ...++.+.|++.+ +.++...+|+|++++ ++...-..=..+.++
T Consensus 130 ~~~l~i~l~D~----~--~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~-~~~l~~~~s~~l~~~ 186 (720)
T 2yfo_A 130 AQTLEIVLADE----N--AQVEVHLLYGVLEENDVITRSVRIKNTGTG-QITIEKAAAACLDFV 186 (720)
T ss_dssp EEEEEEEEEET----T--TTEEEEEEEEEETTTTEEEEEEEEEECSSS-CEEEEEEEEEEEEES
T ss_pred CcEEEEEEEEC----C--CCEEEEEEEEEECCCCEEEEEEEEEECCCC-CEEEeeeecccccCC
Confidence 45688888774 2 3568888898876 569999999999998 766555444344444
No 35
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=42.19 E-value=26 Score=21.27 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=14.7
Q ss_pred eEEEEEEEEeCCceEEEEE
Q psy17993 30 FRLTYRLILREKELHFNIG 48 (191)
Q Consensus 30 f~l~~~~~L~~~~L~~~l~ 48 (191)
|.=.++|+|.++.|.+.++
T Consensus 29 fagtvtytldgndleirit 47 (85)
T 2kl8_A 29 FAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp TTCEEEEEECSSCEEEEEE
T ss_pred hcceEEEEecCCeeEEEEe
Confidence 4557899999988887763
No 36
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=41.57 E-value=96 Score=24.69 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=23.4
Q ss_pred ceEEEEEEEEeCCc--eEEEEEEEeCCCCceeEE
Q psy17993 29 RFRLTYRLILREKE--LHFNIGVYNPSNDLAFNF 60 (191)
Q Consensus 29 ~f~l~~~~~L~~~~--L~~~l~v~N~~~~~~m~f 60 (191)
...++.+|+|..+. +.++++|.|.+.. ++..
T Consensus 134 G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~-~~~~ 166 (330)
T 3blc_A 134 GNTFTKTFVLKRGDYAVNVNYNVQNAGEK-PLEI 166 (330)
T ss_dssp SCEEEEEEEEETTCCEEEEEEEEECCSSS-CEEE
T ss_pred CeEEEEEEEEcCCceEEEEEEEEEcCCCC-ccee
Confidence 36788899998554 7777888899988 6644
No 37
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=36.68 E-value=1e+02 Score=27.63 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=41.5
Q ss_pred CCCeEEEEEccCCCcccCCCcceEEEEEEEEeC--CceEEEEEEEeCCCCceeEEeeccceeEEeCC
Q psy17993 8 TLDAFCIFPYLDIFCIFPYFARFRLTYRLILRE--KELHFNIGVYNPSNDLAFNFNLLLHTYLKVPD 72 (191)
Q Consensus 8 ~~~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~--~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~~ 72 (191)
++...+++.|.|. . ..+++.+.|++-+ +.++...+|+|+|++ ++...-..-..+.++.
T Consensus 128 ~~~~~l~i~l~D~----~--~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~-~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 128 QEAETLEIVLGDA----L--IGLEVTLQYTAYEKWNVITRAARFENKGGE-RLKLLRALSMSVDFPT 187 (729)
T ss_dssp GGEEEEEEEEEET----T--TTEEEEEEEEEESSSSEEEEEEEEEECSSS-CEEEEEEEEEEEEESC
T ss_pred CCceEEEEEEEeC----C--CCeEEEEEEEEECCCCEEEEEEEEEECCCC-CEEEeEeeeecCcCCC
Confidence 3455777777764 1 4678888888854 568888999999999 8777655555555553
No 38
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=32.95 E-value=48 Score=26.92 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=20.4
Q ss_pred EEEEEEEEe---CCceEEEEEEEeCCCCceeEE
Q psy17993 31 RLTYRLILR---EKELHFNIGVYNPSNDLAFNF 60 (191)
Q Consensus 31 ~l~~~~~L~---~~~L~~~l~v~N~~~~~~m~f 60 (191)
.|.++.+.. .+.+.+..+|+|+|++ ++.+
T Consensus 23 ~l~v~Ls~~~~~~~~~~vk~tvtN~g~~-~~~l 54 (343)
T 2x3c_A 23 GLDAQLTLVDGSTDDVRVNLTLTNTGDK-PIRL 54 (343)
T ss_dssp CEEEEEEECCCSSSCCEEEEEEEECSSS-CEEE
T ss_pred ceEEEEEecccCCCCeEEEEEEEeCCCC-ceEe
Confidence 444444441 2459999999999999 8655
No 39
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=32.80 E-value=1.5e+02 Score=26.78 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCeEEEEEccCCCcccCCCcceEEEEEEEEeC--CceEEEEEEEeCCCCceeEEeeccceeEEeC
Q psy17993 9 LDAFCIFPYLDIFCIFPYFARFRLTYRLILRE--KELHFNIGVYNPSNDLAFNFNLLLHTYLKVP 71 (191)
Q Consensus 9 ~~~~~~~~l~~~~t~~~yP~~f~l~~~~~L~~--~~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~ 71 (191)
+...+++.|.|. . ..+++.+.|++.+ +.++...+|+|.|++ ++-..-..=..+.+|
T Consensus 130 ~~~~l~i~l~D~----~--~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~-~v~l~~~~S~~l~~p 187 (745)
T 3mi6_A 130 DAQTLVVSFNDR----I--TGLALDLNYSIFPHQDVIVKSAKFTNPSSE-KLVLNRALSSQLDLP 187 (745)
T ss_dssp CCEEEEEEEEET----T--TCCEEEEEEEEEGGGTEEEEEEEEECCSSS-CEEEEEEEEEEEEES
T ss_pred CCCEEEEEEEeC----C--CCeEEEEEEEEECCCCEEEEEEEEEECCCC-CEEeeeecccccCCC
Confidence 456788888875 2 3567777888764 578888999999998 766654433334444
No 40
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=32.76 E-value=38 Score=24.20 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=21.3
Q ss_pred ceEEEEEEEeCCCCceeEEeeccceeEEeC
Q psy17993 42 ELHFNIGVYNPSNDLAFNFNLLLHTYLKVP 71 (191)
Q Consensus 42 ~L~~~l~v~N~~~~~~m~f~~g~HpyF~v~ 71 (191)
-|.+.++|+|.|++ ++.|+. ..|.+-
T Consensus 48 fviV~VTIeN~g~e-~~~~s~---~~F~L~ 73 (159)
T 3cfu_A 48 RLIIEVTMENIGED-SISYNF---IGFDLR 73 (159)
T ss_dssp EEEEEEEEEECSSS-CEEEEG---GGEEEE
T ss_pred EEEEEEEEEECCCC-ceeeCc---ccEEEE
Confidence 58999999999999 998875 357663
No 41
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=31.63 E-value=20 Score=32.21 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=22.0
Q ss_pred cCCCcceEEEE--------EEEEeCCceEEEEEEEeCCCC
Q psy17993 24 FPYFARFRLTY--------RLILREKELHFNIGVYNPSND 55 (191)
Q Consensus 24 ~~yP~~f~l~~--------~~~L~~~~L~~~l~v~N~~~~ 55 (191)
-.|||-|=|.| +++-.++.++++.+|+|+|+.
T Consensus 590 plypFG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~ 629 (721)
T 2x41_A 590 PAYEFGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGR 629 (721)
T ss_dssp EEECTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSS
T ss_pred eeeccCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCC
Confidence 46888774433 122235679999999999976
No 42
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=28.68 E-value=97 Score=22.13 Aligned_cols=33 Identities=9% Similarity=0.355 Sum_probs=25.9
Q ss_pred CCceEEEEEEEeCCCCceeEEe-eccceeEEeCCC
Q psy17993 40 EKELHFNIGVYNPSNDLAFNFN-LLLHTYLKVPDV 73 (191)
Q Consensus 40 ~~~L~~~l~v~N~~~~~~m~f~-~g~HpyF~v~~~ 73 (191)
.+.++..+.|+|++.. +...+ +-++=||.....
T Consensus 23 ~n~i~~~~~I~N~g~~-~i~Ls~lkiRYyft~d~~ 56 (160)
T 2xbt_A 23 SNQIYMNMKLQNTGSS-TYDLSKITIRYFYTSDDD 56 (160)
T ss_dssp ESSEEEEEEEEECSSC-CEEGGGEEEEEEECCSSC
T ss_pred CCEEEEEEEEEECCCC-ceecCcEEEEEEEeCCCC
Confidence 4679999999999988 87765 677778877543
No 43
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=28.08 E-value=1.1e+02 Score=20.25 Aligned_cols=26 Identities=12% Similarity=0.172 Sum_probs=18.7
Q ss_pred EEEEEEe---CCceEEEEEEEeCCCCceeE
Q psy17993 33 TYRLILR---EKELHFNIGVYNPSNDLAFN 59 (191)
Q Consensus 33 ~~~~~L~---~~~L~~~l~v~N~~~~~~m~ 59 (191)
.++|++. +++...+++|+|+++. ++.
T Consensus 4 ~v~y~v~~~W~~Gf~~~vtVtN~g~~-~i~ 32 (107)
T 3ndz_E 4 EVTYAITNSWGSGASVNVTIKNNGTT-PIN 32 (107)
T ss_dssp EEEEEEEEECSSEEEEEEEEEECSSS-CEE
T ss_pred EEEEEEcccCCCCEEEEEEEEeCCCC-ccc
Confidence 4455542 4678899999999988 653
No 44
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=27.57 E-value=75 Score=25.99 Aligned_cols=20 Identities=25% Similarity=0.704 Sum_probs=16.0
Q ss_pred CCCcEEEeCCccCCCCCCCCCCCCCCceEEecc
Q psy17993 137 NFPDTVIWNPWDTGRDMKDFGDDEYPNMICVEA 169 (191)
Q Consensus 137 ~~~~~vvWnp~~~~~~~~d~~~~~~~~fvCiEP 169 (191)
+.+...+|||| |..+.|+-+
T Consensus 318 ~~~~y~~WNPW-------------~~~~~~~sa 337 (367)
T 1x9y_A 318 DQEKLIYWNPW-------------DTELSIQDA 337 (367)
T ss_dssp TEEEEEEECTT-------------CSSCEEEET
T ss_pred CCcEEEEecCc-------------cCCceeecC
Confidence 45789999999 567888776
No 45
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=27.07 E-value=1.4e+02 Score=21.46 Aligned_cols=32 Identities=9% Similarity=0.279 Sum_probs=25.0
Q ss_pred CCceEEEEEEEeCCCCceeEEe-eccceeEEeCC
Q psy17993 40 EKELHFNIGVYNPSNDLAFNFN-LLLHTYLKVPD 72 (191)
Q Consensus 40 ~~~L~~~l~v~N~~~~~~m~f~-~g~HpyF~v~~ 72 (191)
.+.++..+.|+|++.. +...+ +-+.=||....
T Consensus 26 ~n~i~~~~~I~N~g~~-~i~Ls~lkiRYyft~d~ 58 (170)
T 2wnx_A 26 KNTIRATINIKNTGTT-PVNLSDIKVRYWFTSDG 58 (170)
T ss_dssp CCEEEEEEEEEECSSS-CEEGGGEEEEEEECCTT
T ss_pred CCEEEEEEEEEECCCC-ceecCcEEEEEEEcCCC
Confidence 4679999999999988 77765 66777776653
No 46
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=25.27 E-value=33 Score=30.82 Aligned_cols=15 Identities=7% Similarity=0.102 Sum_probs=12.3
Q ss_pred CceEEEEEEEeCCCC
Q psy17993 41 KELHFNIGVYNPSND 55 (191)
Q Consensus 41 ~~L~~~l~v~N~~~~ 55 (191)
..++++++|+|+|+.
T Consensus 613 ~~~~vsv~VtNtG~~ 627 (713)
T 3zyz_A 613 NVATVTVDIANSGQV 627 (713)
T ss_dssp EEEEEEEEEEECSSS
T ss_pred CeEEEEEEEEeCCCC
Confidence 358899999999976
No 47
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=25.07 E-value=1.7e+02 Score=20.48 Aligned_cols=46 Identities=13% Similarity=0.317 Sum_probs=30.6
Q ss_pred EEEEEEEe-----CCceEEEEEEEeCCCCceeEEe-eccceeEEeCCCCceEE
Q psy17993 32 LTYRLILR-----EKELHFNIGVYNPSNDLAFNFN-LLLHTYLKVPDVRRCQV 78 (191)
Q Consensus 32 l~~~~~L~-----~~~L~~~l~v~N~~~~~~m~f~-~g~HpyF~v~~~~~~~~ 78 (191)
|++.|+-. .++++..+.|+|++.. +...+ +-+.=||......+..+
T Consensus 3 l~vqy~~~~~~~~~n~i~~~~~I~N~g~~-~i~Ls~lkiRYyft~d~~~~~~~ 54 (146)
T 3zqx_A 3 VKVQYLCENTQTSTQEIKGKFNIVNTGNR-DYSLKDIVLRYYFTKEHNSQLQF 54 (146)
T ss_dssp EEEEEEESCCCSEESCEEEEEEEEECSSC-CEEGGGEEEEEECCCCCCSCEEE
T ss_pred EEEEEEcCCCCCCCCEEeEEEEEEECCCc-eEEcCcEEEEEEEecCCCccEEE
Confidence 45555532 4669999999999988 77766 56676776654333333
No 48
>3lzq_A P19 protein; copper binding, iron transport, iron uptake, P19 delition, T protein; 1.41A {Campylobacter jejuni} PDB: 3lzn_A 3lzo_A 3lzp_A 3lzl_A 3lzr_A
Probab=24.68 E-value=1.5e+02 Score=21.21 Aligned_cols=28 Identities=11% Similarity=-0.020 Sum_probs=17.1
Q ss_pred eEEEEEEEeCCCCc-------eeEEeeccceeEEe
Q psy17993 43 LHFNIGVYNPSNDL-------AFNFNLLLHTYLKV 70 (191)
Q Consensus 43 L~~~l~v~N~~~~~-------~m~f~~g~HpyF~v 70 (191)
|+++++|+|++... ||--+-|.|=.=|+
T Consensus 66 L~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~Nv 100 (159)
T 3lzq_A 66 LTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANI 100 (159)
T ss_dssp CEEEEEEEETTTCCEEEEECEEEEETTEEEEEEEE
T ss_pred ceEEEEEEeCCCCeEEEeecceeecCCCCccccce
Confidence 78888888877651 44444555555444
No 49
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=22.95 E-value=1.3e+02 Score=23.24 Aligned_cols=31 Identities=6% Similarity=0.153 Sum_probs=26.3
Q ss_pred cceEEEEEEEEeCCceEEEEEEEeCCCCceeE
Q psy17993 28 ARFRLTYRLILREKELHFNIGVYNPSNDLAFN 59 (191)
Q Consensus 28 ~~f~l~~~~~L~~~~L~~~l~v~N~~~~~~m~ 59 (191)
-..++..+|.-.++.+.+.++++|+... +|.
T Consensus 42 ~GLeI~g~f~r~~g~i~l~l~~~N~s~~-~is 72 (258)
T 2g30_A 42 KGLEISGTFTHRQGHIYMEMNFTNKALQ-HMT 72 (258)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEECSSS-CBC
T ss_pred CcEEEEEEEEEeCCEEEEEEEEecCCcc-cee
Confidence 3578888888888999999999999988 753
No 50
>3nrp_A Periplasmic protein-probably involved in high-AFF transport; immunoglobulin-like fold, iron transporter, copper binding; 1.60A {Escherichia coli} PDB: 3nrq_A
Probab=21.39 E-value=1.9e+02 Score=20.71 Aligned_cols=29 Identities=10% Similarity=-0.049 Sum_probs=17.3
Q ss_pred eEEEEEEEeCCCCc-------eeEEeeccceeEEeC
Q psy17993 43 LHFNIGVYNPSNDL-------AFNFNLLLHTYLKVP 71 (191)
Q Consensus 43 L~~~l~v~N~~~~~-------~m~f~~g~HpyF~v~ 71 (191)
|+++++|+|.+... ||--+-|.|=.=|+.
T Consensus 68 L~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~Nvk 103 (160)
T 3nrp_A 68 LTISYTLVNNDTGEKQEGTFMPMVASDGPHYGANIK 103 (160)
T ss_dssp CEEEEEEEETTTCCEEEEECEEEEETTEEEEEEEEC
T ss_pred ceeEEEEEeCCCCeEEEeeccceecCCCCccccccC
Confidence 67777777766541 455555666555553
No 51
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=20.61 E-value=1.2e+02 Score=19.57 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=11.6
Q ss_pred cceEEEEEEEEeCCceEEEEEEEeCCC
Q psy17993 28 ARFRLTYRLILREKELHFNIGVYNPSN 54 (191)
Q Consensus 28 ~~f~l~~~~~L~~~~L~~~l~v~N~~~ 54 (191)
+.|+++++. |++.+-.+++.+.|.++
T Consensus 4 ~~YrITve~-l~~~~~~l~Fe~~nhDD 29 (88)
T 3cjl_A 4 NIYQITVEE-KAEHQRTLSFEFSLHDD 29 (88)
T ss_dssp EEEEEEEEE-SSTTCCEEEEEEEESSC
T ss_pred ceEEEEEEE-ccCCCCCeEEeccChHH
Confidence 334444433 23333445555555554
No 52
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=20.26 E-value=1.4e+02 Score=20.48 Aligned_cols=40 Identities=8% Similarity=0.003 Sum_probs=24.3
Q ss_pred cccccCCCeEEEEEccCC---CcccCCCcceEEEEEEEEeCCceEE
Q psy17993 3 DETTATLDAFCIFPYLDI---FCIFPYFARFRLTYRLILREKELHF 45 (191)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~---~t~~~yP~~f~l~~~~~L~~~~L~~ 45 (191)
|+=+++.. +++++++. .-.+.||+.|.|++... .+.+...
T Consensus 60 ~eLM~EE~--I~lE~E~~~~W~eleG~~~~~sLr~IL~-~gR~~Eg 102 (122)
T 2nvn_A 60 PELMPEER--LQIEAESALLWLEAEGFADAYELRLILA-SDRRVEA 102 (122)
T ss_dssp CCSSCSSC--EEEEEECSSEEEEEEEETTEEEEEEEEC-SSSCCEE
T ss_pred HHhcchhh--eeeeecCccEEEEeecccCeeEEEEEEc-CCcceee
Confidence 44455544 45555444 45678899999998875 4444433
Done!