BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17994
(268 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SHN|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHN|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHQ|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
pdb|1SHQ|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
Length = 478
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 161/246 (65%), Gaps = 15/246 (6%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
FLGDGMSL T+TAARIYKG L + E++ +S+E F F ++KTY D+Q DS
Sbjct: 33 FFLGDGMSLSTVTAARIYKGGL------TGKFEREKISWEEFDFAALSKTYNTDKQVTDS 86
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A +ATAYL GVK N G IG+++ R NC + FT SI W Q+ G+STGVVT+TR
Sbjct: 87 AASATAYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTGVVTSTR 146
Query: 121 VTHASPAGTYAHTAERDWECDADI---KKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGG 177
VTHA+PAGTYAH A+RDWE D+D+ ++DPE C DIA QLV +PG+ KVIMGG
Sbjct: 147 VTHATPAGTYAHVADRDWENDSDVVHDREDPEI----CDDIAEQLVFREPGKNFKVIMGG 202
Query: 178 GRAKFLPVSSKDDEGNV-GERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNKGT 236
GR F P + D E + GER DG+ LI +WL DK ++ A ++ R LL +D + T
Sbjct: 203 GRRGFFPEEALDIEDGIPGEREDGKHLITDWLDDKASQGATASYVWNRDDLLAVDI-RNT 261
Query: 237 DYLLGM 242
DYL+G+
Sbjct: 262 DYLMGL 267
>pdb|1K7H|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase
pdb|1K7H|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase
Length = 476
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 160/246 (65%), Gaps = 15/246 (6%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
FLGDGMSL T+TAARIYKG L + E++ +S+E F F ++KTY D+Q DS
Sbjct: 33 FFLGDGMSLSTVTAARIYKGGL------TGKFEREKISWEEFDFAALSKTYNTDKQVTDS 86
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A +ATAYL GVK N G IG+++ R NC + FT SI W Q+ G+STGVVT+TR
Sbjct: 87 AASATAYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTGVVTSTR 146
Query: 121 VTHASPAGTYAHTAERDWECDADI---KKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGG 177
VTHA+PAGTYAH A+RDWE D+D+ ++DPE C DIA QLV +PG+ KVIMGG
Sbjct: 147 VTHATPAGTYAHVADRDWENDSDVVHDREDPEI----CDDIAEQLVFREPGKNFKVIMGG 202
Query: 178 GRAKFLPVSSKDDEGNV-GERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNKGT 236
GR F P + D E + GER DG+ LI +WL DK ++ A ++ R LL +D T
Sbjct: 203 GRRGFFPEEALDIEDGIPGEREDGKHLITDWLDDKASQGATASYVWNRDDLLAVDI-ANT 261
Query: 237 DYLLGM 242
DYL+G+
Sbjct: 262 DYLMGL 267
>pdb|1ZED|A Chain A, Alkaline Phosphatase From Human Placenta In Complex With
P- Nitrophenyl-Phosphonate
Length = 484
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 147/248 (59%), Gaps = 23/248 (9%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGER-GPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTAD 59
+FLGDGM + T+TAARI KGQ ++ GP+ P L+ + FP+ ++KTY VD+ D
Sbjct: 38 IFLGDGMGVSTVTAARILKGQKKDKLGPEIP------LAMDRFPYVALSKTYNVDKHVPD 91
Query: 60 SACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTT 119
S TATAYLCGVK NF TIG+++ C + E S++ A+ GKS GVVTTT
Sbjct: 92 SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNE--VISVMNRAKKAGKSVGVVTTT 149
Query: 120 RVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGGGR 179
RV HASPAGTYAHT R+W DAD+ + GC+DIA QL+ + I VI+GGGR
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADVPASARQ--EGCQDIATQLISN---MDIDVILGGGR 204
Query: 180 AKFLPVSS-----KDDEGNVGERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNK 234
+ + DD G R DG++L++EWL + + A+++ R +L++ +
Sbjct: 205 KYMFRMGTPDPEYPDDYSQGGTRLDGKNLVQEWLAKR----QGARYVWNRTELMQASLDP 260
Query: 235 GTDYLLGM 242
+L+G+
Sbjct: 261 SVTHLMGL 268
>pdb|1EW2|A Chain A, Crystal Structure Of A Human Phosphatase
Length = 513
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 147/248 (59%), Gaps = 23/248 (9%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGER-GPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTAD 59
+FLGDGM + T+TAARI KGQ ++ GP+ P L+ + FP+ ++KTY VD+ D
Sbjct: 38 IFLGDGMGVSTVTAARILKGQKKDKLGPEIP------LAMDRFPYVALSKTYNVDKHVPD 91
Query: 60 SACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTT 119
S TATAYLCGVK NF TIG+++ C + E S++ A+ GKS GVVTTT
Sbjct: 92 SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNEVI--SVMNRAKKAGKSVGVVTTT 149
Query: 120 RVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGGGR 179
RV HASPAGTYAHT R+W DAD+ + GC+DIA QL+ + I VI+GGGR
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADVPASARQ--EGCQDIATQLISN---MDIDVILGGGR 204
Query: 180 AKFLPVSS-----KDDEGNVGERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNK 234
+ + DD G R DG++L++EWL + + A+++ R +L++ +
Sbjct: 205 KYMFRMGTPDPEYPDDYSQGGTRLDGKNLVQEWLAKR----QGARYVWNRTELMQASLDP 260
Query: 235 GTDYLLGM 242
+L+G+
Sbjct: 261 SVTHLMGL 268
>pdb|3MK0|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK1|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK2|A Chain A, Placental Alkaline Phosphatase Complexed With Phe
pdb|2GLQ|A Chain A, X-Ray Structure Of Human Alkaline Phosphatase In Complex
With Strontium
pdb|1ZEF|A Chain A, Structure Of Alkaline Phosphatase From Human Placenta In
Complex With Its Uncompetitive Inhibitor L-Phe
pdb|1ZEB|A Chain A, X-ray Structure Of Alkaline Phosphatase From Human
Placenta In Complex With 5'-amp
Length = 484
Score = 183 bits (464), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 146/248 (58%), Gaps = 23/248 (9%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGER-GPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTAD 59
+FLGDGM + T+TAARI KGQ ++ GP+ P L+ + FP+ ++KTY VD+ D
Sbjct: 38 IFLGDGMGVSTVTAARILKGQKKDKLGPEIP------LAMDRFPYVALSKTYNVDKHVPD 91
Query: 60 SACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTT 119
TATAYLCGVK NF TIG+++ C + E S++ A+ GKS GVVTTT
Sbjct: 92 XGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNE--VISVMNRAKKAGKSVGVVTTT 149
Query: 120 RVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGGGR 179
RV HASPAGTYAHT R+W DAD+ + GC+DIA QL+ + I VI+GGGR
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADVPASARQ--EGCQDIATQLISN---MDIDVILGGGR 204
Query: 180 AKFLPVSS-----KDDEGNVGERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNK 234
+ + DD G R DG++L++EWL + + A+++ R +L++ +
Sbjct: 205 KYMFRMGTPDPEYPDDYSQGGTRLDGKNLVQEWLAKR----QGARYVWNRTELMQASLDP 260
Query: 235 GTDYLLGM 242
+L+G+
Sbjct: 261 SVTHLMGL 268
>pdb|1KHJ|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHJ|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHK|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHK|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHL|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHL|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHN|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
pdb|1KHN|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
Length = 449
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + HA+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQHATPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1ANI|A Chain A, Alkaline Phosphatase (D153h, K328h)
pdb|1ANI|B Chain B, Alkaline Phosphatase (D153h, K328h)
Length = 446
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 44 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 91
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 92 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 139
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + HA+PA AH R + A +K P E+ G G I QL+
Sbjct: 140 TGNVSTAELQHATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 194
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 195 -ARADVTLGGGAKTF 208
>pdb|2ANH|A Chain A, Alkaline Phosphatase (D153h)
pdb|2ANH|B Chain B, Alkaline Phosphatase (D153h)
Length = 446
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 44 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 91
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 92 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 139
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + HA+PA AH R + A +K P E+ G G I QL+
Sbjct: 140 TGNVSTAELQHATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 194
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 195 -ARADVTLGGGAKTF 208
>pdb|1Y7A|A Chain A, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
pdb|1Y7A|B Chain B, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
Length = 449
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + HA+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQHATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1ALK|A Chain A, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
pdb|1ALK|B Chain B, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
Length = 449
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3BDH|A Chain A, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
pdb|3BDH|B Chain B, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
Length = 458
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 48 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 95
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 96 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 143
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 144 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 198
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 199 -ARADVTLGGGAKTF 212
>pdb|1ALH|A Chain A, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
pdb|1ALH|B Chain B, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
Length = 446
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 44 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 91
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 92 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 139
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 140 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 194
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 195 -ARADVTLGGGAKTF 208
>pdb|1KH4|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH4|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH5|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH5|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH9|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
pdb|1KH9|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3BDG|B Chain B, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 48 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 95
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 96 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 143
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 144 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 198
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 199 -ARADVTLGGGAKTF 212
>pdb|1ANJ|A Chain A, Alkaline Phosphatase (K328h)
pdb|1ANJ|B Chain B, Alkaline Phosphatase (K328h)
Length = 446
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 44 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 91
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 92 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 139
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 140 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 194
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 195 -ARADVTLGGGAKTF 208
>pdb|1ED8|A Chain A, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED8|B Chain B, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|A Chain A, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|B Chain B, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1EW8|A Chain A, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW8|B Chain B, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW9|A Chain A, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1EW9|B Chain B, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1Y6V|A Chain A, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|1Y6V|B Chain B, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|3TG0|A Chain A, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|B Chain B, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|C Chain C, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|D Chain D, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3DYC|A Chain A, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
pdb|3DYC|B Chain B, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1ALJ|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALJ|B Chain B, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|B Chain B, Alkaline Phosphatase Mutant (H412n)
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1HQA|A Chain A, Alkaline Phosphatase (H412q)
pdb|1HQA|B Chain B, Alkaline Phosphatase (H412q)
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1AJD|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJD|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
Length = 449
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQGATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1KH7|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
pdb|1KH7|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
Length = 449
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 85/195 (43%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERDWECDADIKKDPERIGN-----GCKDIAYQLVKDDP 167
TG V+T + A+PA AH R +C K + GN G I QL+
Sbjct: 143 TGNVSTAELQGATPAALVAHVTSR--KCYGPSKTSQKCPGNALEKGGKGSITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3CMR|A Chain A, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
pdb|3CMR|B Chain B, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
Length = 449
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAH-TAERDWECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH T+ + + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSSKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3BDF|A Chain A, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDF|B Chain B, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDG|A Chain A, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 48 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 95
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 96 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 143
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A PA AH R + A +K P E+ G G I QL+
Sbjct: 144 TGNVSTAELQDAVPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 198
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 199 -ARADVTLGGGAKTF 212
>pdb|2G9Y|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
pdb|2G9Y|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
Length = 449
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D+A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDTAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1URB|A Chain A, Alkaline Phosphatase (N51mg)
pdb|1URB|B Chain B, Alkaline Phosphatase (N51mg)
pdb|1URA|A Chain A, Alkaline Phosphatase (D51zn)
pdb|1URA|B Chain B, Alkaline Phosphatase (D51zn)
Length = 446
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +G+GM ITAAR Y G +G D P TG Y ++++T
Sbjct: 44 LLIGNGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 91
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
DSA +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 92 KPDYVTDSAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 139
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 140 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 194
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 195 -ARADVTLGGGAKTF 208
>pdb|1ELZ|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102g)
pdb|1ELZ|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102g)
Length = 449
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDGAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1B8J|A Chain A, Alkaline Phosphatase Complexed With Vanadate
pdb|1B8J|B Chain B, Alkaline Phosphatase Complexed With Vanadate
pdb|2GA3|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
pdb|2GA3|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
Length = 449
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDXAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|1HJK|A Chain A, Alkaline Phosphatase Mutant H331q
pdb|1HJK|B Chain B, Alkaline Phosphatase Mutant H331q
Length = 449
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDXAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|2IUC|A Chain A, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
+ + DG L I++ +K G ++ F+N G+ KT + DS
Sbjct: 39 LLISDGAGLSQISSTFYFK-----------EGTPNYTQFKNI---GLIKTSSSREDVTDS 84
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A ATA+ CG+K IGV + +K SI++ A TGVV T+
Sbjct: 85 ASGATAFSCGIKTYNAAIGV-----ADDSTAVK-------SIVEIAALNNIKTGVVATSS 132
Query: 121 VTHASPAGTYAHTAERDWE 139
+THA+PA YAH R E
Sbjct: 133 ITHATPASFYAHALNRGLE 151
>pdb|3E2D|A Chain A, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
pdb|3E2D|B Chain B, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
Length = 502
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 46 GMAKTYCVDQQTADSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKW 105
G + T+ D DSAC+AT G+ ++ IG++S+ + ++L+
Sbjct: 51 GSSLTHPEDAIVVDSACSATMLATGIYSSSEVIGIDSQGNH------------VETVLEK 98
Query: 106 AQDFGKSTGVVTTTRVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKD 165
A+ GK+TG+V+ TR+THA+PA AH R E Q+ D
Sbjct: 99 AKKAGKATGLVSDTRLTHATPASFAAHQPHRSLEN--------------------QIASD 138
Query: 166 DPGRRIKVIMGGGRAKFLPVSSKD 189
V++ GG ++P S+ D
Sbjct: 139 MLATGADVMLSGGLRHWIPKSTND 162
>pdb|2IUC|B Chain B, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
+ + DG L I++ +K G ++ F+N G+ KT + DS
Sbjct: 39 LLISDGAGLSQISSTFYFK-----------SGTPNYTQFKNI---GLIKTSSSREDVTDS 84
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A ATA+ CG+K IGV + +K SI++ A TGVV T+
Sbjct: 85 ASGATAFSCGIKTYNAAIGV-----ADDSTAVK-------SIVEIAALNSIKTGVVATSS 132
Query: 121 VTHASPAGTYAHTAERDWE 139
+THA+PA YAH R E
Sbjct: 133 ITHATPASFYAHALNRGLE 151
>pdb|1ELY|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102c)
pdb|1ELY|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102c)
Length = 449
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDCAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|3DPC|A Chain A, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
pdb|3DPC|B Chain B, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
Length = 455
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDLAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|2W5X|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site.
pdb|2W5X|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site
Length = 375
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
+ + DG L I++ +K G ++ F+N G+ KT + D
Sbjct: 39 LLISDGAGLSQISSTFYFK-----------SGTPNYTQFKNI---GLIKTSSSREDVTDX 84
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A ATA+ CG+K IGV + +K SI++ A TGVV T+
Sbjct: 85 ASGATAFSCGIKTYNAAIGV-----ADDSTAVK-------SIVEIAALNNIKTGVVATSS 132
Query: 121 VTHASPAGTYAHTAERDWE 139
+T A+PA YAH R E
Sbjct: 133 ITEATPASFYAHALNRGLE 151
>pdb|2W5V|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5V|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5W|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site.
pdb|2W5W|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site
Length = 375
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTADS 60
+ + DG L I++ +K G ++ F+N G+ KT + D
Sbjct: 39 LLISDGAGLSQISSTFYFK-----------SGTPNYTQFKNI---GLIKTSSSREDVTDX 84
Query: 61 ACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTR 120
A ATA+ CG+K IGV + +K SI++ A TGVV T+
Sbjct: 85 ASGATAFSCGIKTYNAAIGV-----ADDSTAVK-------SIVEIAALNNIKTGVVATSS 132
Query: 121 VTHASPAGTYAHTAERDWE 139
+T A+PA YAH R E
Sbjct: 133 ITDATPASFYAHALNRGLE 151
>pdb|3A52|A Chain A, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp.
pdb|3A52|B Chain B, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp
Length = 400
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 44/185 (23%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQ--TA 58
+ +GDGM +A R ++ D P E+ + + GMA TY +
Sbjct: 5 IMVGDGMGPAYTSAYRYFQ--------DNPDTEEIEQTVFDRLLVGMASTYPARESGYVT 56
Query: 59 DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTT 118
DSA +ATA G K+ G I V+ K P T+I++ A+ G STGV T
Sbjct: 57 DSAASATALATGFKSYNGAIAVDIN---------KRP---LTTIMQMAKARGMSTGVAVT 104
Query: 119 TRVTHASPAGTYAHTAER-DWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMGG 177
+V HA+PA H R ++E IA ++K D VI+GG
Sbjct: 105 AQVNHATPAAFLTHNESRKNYEA-----------------IAADMLKSDA----DVILGG 143
Query: 178 GRAKF 182
GR F
Sbjct: 144 GRKYF 148
>pdb|1ELX|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102a)
pdb|1ELX|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102a)
Length = 449
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 1 MFLGDGMSLPTITAARIYKGQLGE--RGPDEPRGEQDHLSFENFPFTGMAKTYCVDQQTA 58
+ +GDGM ITAAR Y G +G D P TG Y ++++T
Sbjct: 47 LLIGDGMGDSEITAARNYAEGAGGFFKGIDA------------LPLTGQYTHYALNKKTG 94
Query: 59 ------DSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKS 112
D+A +ATA+ GVK G +GV+ I K+ +P +IL+ A+ G +
Sbjct: 95 KPDYVTDAAASATAWSTGVKTYNGALGVD--IHEKD-----HP-----TILEMAKAAGLA 142
Query: 113 TGVVTTTRVTHASPAGTYAHTAERD-WECDADIKKDP----ERIGNGCKDIAYQLVKDDP 167
TG V+T + A+PA AH R + A +K P E+ G G I QL+
Sbjct: 143 TGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGS--ITEQLLN--- 197
Query: 168 GRRIKVIMGGGRAKF 182
R V +GGG F
Sbjct: 198 -ARADVTLGGGAKTF 211
>pdb|2X98|A Chain A, H.Salinarum Alkaline Phosphatase
pdb|2X98|B Chain B, H.Salinarum Alkaline Phosphatase
Length = 431
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 33/186 (17%)
Query: 2 FLGDGMSLPTITAAR---IYKGQLGERGPDEPRGEQDHLSFENFPFTGMAKTYCVD--QQ 56
++ DGM I+AAR YK ER P + F+ F G T+ D +
Sbjct: 10 YIVDGMGQTQISAARYLNAYK-TAPERFPLNVSPAETPTGFDAFSSRGSMTTFPDDPYET 68
Query: 57 TADSACTATAYLCGVKNNFGTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVV 116
T DSA ATA+ GVK G IG + + G + + ++L+ A G +TG++
Sbjct: 69 TTDSAAAATAFASGVKTYNGAIGG----VQTSGGGFQRVD----TVLERASAQGYATGLI 120
Query: 117 TTTRVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMG 176
TTT THA+PA AH +R GN + IA Q +++ + VI+G
Sbjct: 121 TTTEATHATPAAFAAHVEDR---------------GNQTE-IARQYIEE---TQPDVILG 161
Query: 177 GGRAKF 182
G R F
Sbjct: 162 GQRRDF 167
>pdb|2JI5|A Chain A, Structure Of Ump Kinase From Pyrococcus Furiosus Complexed
With Utp
pdb|2JI5|B Chain B, Structure Of Ump Kinase From Pyrococcus Furiosus Complexed
With Utp
Length = 227
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 155 CKDIAYQLVKDDPGRRIKVIMGGGRA--KFLPVSSK 188
K+IAYQL K + V++GGG+ K++ V+ K
Sbjct: 24 IKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEK 59
>pdb|2BRI|A Chain A, Ump Kinase From Pyrococcus Furiosus Complexed With Its
Substrate Analog Amppnp
pdb|2BRI|B Chain B, Ump Kinase From Pyrococcus Furiosus Complexed With Its
Substrate Analog Amppnp
Length = 225
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 155 CKDIAYQLVKDDPGRRIKVIMGGGRA--KFLPVSSK 188
K+IAYQL K + V++GGG+ K++ V+ K
Sbjct: 22 IKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEK 57
>pdb|2BMU|A Chain A, Ump Kinase From Pyrococcus Furiosus Complexed With Its
Substrate Ump And Its Substrate Analog Amppnp
pdb|2BMU|B Chain B, Ump Kinase From Pyrococcus Furiosus Complexed With Its
Substrate Ump And Its Substrate Analog Amppnp
Length = 226
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 155 CKDIAYQLVKDDPGRRIKVIMGGGRA--KFLPVSSK 188
K+IAYQL K + V++GGG+ K++ V+ K
Sbjct: 23 IKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEK 58
>pdb|2BRX|A Chain A, Ump Kinase From Pyrococcus Furiosus Without Ligands
pdb|2BRX|B Chain B, Ump Kinase From Pyrococcus Furiosus Without Ligands
Length = 244
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 155 CKDIAYQLVKDDPGRRIKVIMGGGRA--KFLPVSSK 188
K+IAYQL K + V++GGG+ K++ V+ K
Sbjct: 41 IKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEK 76
>pdb|3HXL|A Chain A, Crystal Structure Of The Sheath Tail Protein (dsy3957)
From Desulfitobacterium Hafniense, Northeast Structural
Genomics Consortium Target Dhr18
Length = 446
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 117 TTTRVTHASPAGTYAHTAERDWECDADIKKDPERIGNGCKDIAYQLVKDDPGRRIKVIMG 176
T ++ A AG + TA + A +++D + + D Q K+ R+ ++
Sbjct: 299 TNAQIIAALQAGEFLFTAS---DNQALVEQDINTLTSFTADKGKQFAKN----RVIRVLD 351
Query: 177 GGRAKFLPVSSKDDEGNVGERSDGQDLIKEWLLDKTNRTKKAKFITTRQQLLELDPNKGT 236
G F+ + SK G V +DG++L+K ++ N + I +L G
Sbjct: 352 GINNDFVRIFSKFYIGKVSNNADGRNLLKSECINYXNTLQDIDAIKNFDGQTDLTVQSGN 411
Query: 237 DYLLGMNLFFFLSWASHSPSGSTCQVYVIVPV 268
D ++ + ++A P S ++YV V +
Sbjct: 412 D----VDAVYIEAYA--WPVDSIEKIYVRVRI 437
>pdb|4DGU|A Chain A, Crystal Structure Of A Putative Cell Adhesion Protein
(Bt0320) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.37 A Resolution
pdb|4DGU|B Chain B, Crystal Structure Of A Putative Cell Adhesion Protein
(Bt0320) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.37 A Resolution
Length = 247
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 76 GTIGVNSKISRKNCEGMKNPEYFTTSILKWAQDFGKSTGVVTTTRVTH 123
GTI +N +N E K E TT++L + G+ G +T VT
Sbjct: 163 GTIEINENALSENIEVKKVSEGVTTNVLPQKINAGEEIGTITVGGVTQ 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,979,579
Number of Sequences: 62578
Number of extensions: 398089
Number of successful extensions: 1019
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 44
length of query: 268
length of database: 14,973,337
effective HSP length: 97
effective length of query: 171
effective length of database: 8,903,271
effective search space: 1522459341
effective search space used: 1522459341
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)