Query psy17999
Match_columns 335
No_of_seqs 141 out of 1425
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 19:40:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vli_A Spore coat polysacchari 100.0 9E-93 3.1E-97 697.2 30.1 303 1-330 55-376 (385)
2 2wqp_A Polysialic acid capsule 100.0 3.3E-92 1.1E-96 686.8 29.0 303 1-331 46-349 (349)
3 3g8r_A Probable spore coat pol 100.0 1.5E-89 5.3E-94 667.5 26.9 300 2-333 33-341 (350)
4 1vs1_A 3-deoxy-7-phosphoheptul 100.0 7.8E-51 2.7E-55 385.4 18.2 202 1-251 63-275 (276)
5 3nvt_A 3-deoxy-D-arabino-heptu 100.0 2.6E-50 9E-55 397.3 19.2 205 1-255 167-383 (385)
6 1vr6_A Phospho-2-dehydro-3-deo 100.0 2.4E-49 8.1E-54 385.8 20.9 206 1-255 131-347 (350)
7 1zco_A 2-dehydro-3-deoxyphosph 100.0 3.7E-48 1.3E-52 364.6 21.7 205 1-252 48-261 (262)
8 3sz8_A 2-dehydro-3-deoxyphosph 100.0 1.2E-46 4.2E-51 357.3 21.4 196 25-256 63-279 (285)
9 2qkf_A 3-deoxy-D-manno-octulos 100.0 5.4E-47 1.9E-51 359.8 11.4 189 48-264 72-280 (280)
10 1o60_A 2-dehydro-3-deoxyphosph 100.0 1.3E-46 4.4E-51 359.0 13.4 213 2-255 44-276 (292)
11 3fs2_A 2-dehydro-3-deoxyphosph 100.0 2.1E-45 7.2E-50 350.3 16.6 181 46-254 95-296 (298)
12 3tml_A 2-dehydro-3-deoxyphosph 100.0 1.4E-45 4.9E-50 350.6 13.8 189 46-256 71-280 (288)
13 2nwr_A 2-dehydro-3-deoxyphosph 100.0 6.6E-40 2.2E-44 309.2 18.8 197 25-260 47-264 (267)
14 1wvo_A Sialic acid synthase; a 99.6 8.3E-17 2.8E-21 125.5 5.1 65 270-334 4-68 (79)
15 1n8f_A DAHP synthetase; (beta/ 99.6 1.9E-14 6.5E-19 139.7 13.7 146 48-221 120-307 (350)
16 1of8_A Phospho-2-dehydro-3-deo 99.4 2.4E-13 8.1E-18 132.6 8.7 162 48-242 135-334 (370)
17 1ucs_A Antifreeze peptide RD1; 98.4 4.7E-07 1.6E-11 66.1 5.0 62 272-333 2-63 (64)
18 1ops_A Type III AFP, type III 98.3 4.5E-07 1.5E-11 66.2 4.5 62 273-334 2-63 (64)
19 1msi_A Type III antifreeze pro 98.3 7.7E-07 2.6E-11 66.0 5.0 63 272-334 3-65 (70)
20 3tqk_A Phospho-2-dehydro-3-deo 98.1 3.8E-06 1.3E-10 81.1 7.0 78 51-129 123-200 (346)
21 3iv3_A Tagatose 1,6-diphosphat 97.4 0.00012 4.2E-09 70.6 5.7 103 49-171 147-294 (332)
22 3tee_A Flagella basal BODY P-r 97.2 0.00012 3.9E-09 66.8 1.8 61 271-331 73-136 (219)
23 3qja_A IGPS, indole-3-glycerol 97.1 0.0022 7.5E-08 60.0 9.8 81 46-127 146-233 (272)
24 3frn_A Flagellar protein FLGA; 96.9 0.00032 1.1E-08 66.1 2.2 60 272-331 143-205 (278)
25 3t7v_A Methylornithine synthas 96.7 0.07 2.4E-06 50.5 17.4 173 49-245 126-333 (350)
26 2v82_A 2-dehydro-3-deoxy-6-pho 96.7 0.012 4.2E-07 51.8 11.1 125 49-215 44-173 (212)
27 3q58_A N-acetylmannosamine-6-p 96.7 0.0068 2.3E-07 55.2 9.5 80 47-127 114-201 (229)
28 3igs_A N-acetylmannosamine-6-p 96.7 0.0074 2.5E-07 55.0 9.6 80 47-127 114-201 (232)
29 3bw2_A 2-nitropropane dioxygen 96.6 0.065 2.2E-06 51.5 16.0 135 49-215 84-234 (369)
30 1to3_A Putative aldolase YIHT; 96.5 0.012 4E-07 55.9 9.8 91 49-144 142-256 (304)
31 1pii_A N-(5'phosphoribosyl)ant 96.4 0.045 1.5E-06 54.8 14.0 152 46-243 141-300 (452)
32 3tsm_A IGPS, indole-3-glycerol 96.1 0.027 9.2E-07 52.8 10.0 82 45-127 152-240 (272)
33 1aj0_A DHPS, dihydropteroate s 96.0 0.17 5.8E-06 47.5 15.2 146 48-218 72-257 (282)
34 1w8s_A FBP aldolase, fructose- 96.0 0.11 3.7E-06 48.0 13.4 83 49-133 125-225 (263)
35 1tx2_A DHPS, dihydropteroate s 95.9 0.36 1.2E-05 45.6 16.7 146 48-218 97-276 (297)
36 1c89_A RD3, antifreeze protein 95.8 0.013 4.5E-07 48.0 5.4 63 272-334 72-134 (134)
37 3glc_A Aldolase LSRF; TIM barr 95.7 0.052 1.8E-06 51.4 10.1 75 49-127 158-244 (295)
38 2gjl_A Hypothetical protein PA 95.7 0.28 9.5E-06 46.2 15.2 134 48-214 52-197 (328)
39 4a29_A Engineered retro-aldol 95.6 0.078 2.7E-06 49.3 10.8 81 45-126 136-223 (258)
40 3bo9_A Putative nitroalkan dio 95.6 0.41 1.4E-05 45.3 16.0 134 46-213 60-200 (326)
41 1eye_A DHPS 1, dihydropteroate 95.5 0.6 2.1E-05 43.7 16.4 66 48-113 63-131 (280)
42 3ble_A Citramalate synthase fr 95.4 0.053 1.8E-06 51.9 9.3 39 179-217 203-244 (337)
43 2z6i_A Trans-2-enoyl-ACP reduc 95.4 0.37 1.2E-05 45.6 15.0 135 46-215 46-188 (332)
44 2qjg_A Putative aldolase MJ040 95.3 0.15 5.3E-06 46.4 11.5 84 49-134 132-232 (273)
45 1vhc_A Putative KHG/KDPG aldol 95.2 0.13 4.5E-06 46.5 10.7 102 51-192 56-160 (224)
46 1ydn_A Hydroxymethylglutaryl-C 95.2 0.061 2.1E-06 50.1 8.7 131 62-221 72-232 (295)
47 1c89_A RD3, antifreeze protein 95.2 0.023 7.8E-07 46.5 4.9 61 273-333 3-63 (134)
48 4avf_A Inosine-5'-monophosphat 95.2 0.17 5.8E-06 50.8 12.4 81 47-128 254-353 (490)
49 1z41_A YQJM, probable NADH-dep 95.1 1.3 4.4E-05 42.0 17.8 141 49-216 83-305 (338)
50 1xi3_A Thiamine phosphate pyro 95.1 0.54 1.8E-05 40.7 13.9 124 49-213 57-185 (215)
51 1nvm_A HOA, 4-hydroxy-2-oxoval 95.0 0.14 4.8E-06 49.0 10.9 122 71-222 95-228 (345)
52 2cw6_A Hydroxymethylglutaryl-C 95.0 0.13 4.5E-06 48.1 10.4 132 62-222 73-234 (298)
53 1i4n_A Indole-3-glycerol phosp 95.0 0.063 2.2E-06 49.7 8.0 82 46-128 134-223 (251)
54 4e38_A Keto-hydroxyglutarate-a 94.9 0.16 5.6E-06 46.4 10.5 130 50-220 72-206 (232)
55 1ydo_A HMG-COA lyase; TIM-barr 94.9 0.064 2.2E-06 50.8 8.0 52 167-222 181-235 (307)
56 4fo4_A Inosine 5'-monophosphat 94.8 0.23 7.7E-06 48.3 11.9 145 46-214 79-236 (366)
57 1yad_A Regulatory protein TENI 94.7 0.41 1.4E-05 42.2 12.4 130 45-214 52-188 (221)
58 2p10_A MLL9387 protein; putati 94.7 0.15 5E-06 48.2 9.7 95 33-128 134-249 (286)
59 1jub_A Dihydroorotate dehydrog 94.7 0.65 2.2E-05 43.1 14.3 160 62-255 93-298 (311)
60 3ffs_A Inosine-5-monophosphate 94.6 0.62 2.1E-05 45.8 14.4 123 68-213 142-270 (400)
61 3igs_A N-acetylmannosamine-6-p 94.5 0.97 3.3E-05 40.8 14.6 129 51-213 58-205 (232)
62 1wa3_A 2-keto-3-deoxy-6-phosph 94.5 0.22 7.6E-06 43.3 9.9 112 62-214 62-174 (205)
63 2vef_A Dihydropteroate synthas 94.5 1.7 5.7E-05 41.3 16.7 64 49-112 68-135 (314)
64 2ftp_A Hydroxymethylglutaryl-C 94.5 0.091 3.1E-06 49.3 7.8 44 177-222 191-237 (302)
65 3bg3_A Pyruvate carboxylase, m 94.4 0.3 1E-05 51.5 12.4 49 167-217 285-336 (718)
66 3ffs_A Inosine-5-monophosphate 94.3 0.2 6.9E-06 49.3 10.2 80 47-127 169-266 (400)
67 3iix_A Biotin synthetase, puta 94.2 0.8 2.7E-05 42.7 13.9 146 46-216 114-291 (348)
68 1y0e_A Putative N-acetylmannos 94.1 0.91 3.1E-05 39.7 13.3 135 53-215 47-201 (223)
69 1yxy_A Putative N-acetylmannos 94.1 1.6 5.5E-05 38.6 14.8 129 54-215 61-212 (234)
70 3khj_A Inosine-5-monophosphate 94.0 0.32 1.1E-05 47.0 10.8 81 47-128 130-228 (361)
71 1wv2_A Thiazole moeity, thiazo 94.0 0.3 1E-05 45.5 10.0 78 50-128 120-208 (265)
72 3q58_A N-acetylmannosamine-6-p 94.0 1.3 4.4E-05 40.0 14.1 131 51-213 58-205 (229)
73 1y0e_A Putative N-acetylmannos 94.0 0.18 6.1E-06 44.4 8.3 77 50-127 105-195 (223)
74 3fok_A Uncharacterized protein 93.9 0.26 9E-06 46.9 9.7 75 49-127 163-259 (307)
75 2yci_X 5-methyltetrahydrofolat 93.9 0.82 2.8E-05 42.5 13.0 143 50-213 65-233 (271)
76 3eeg_A 2-isopropylmalate synth 93.9 0.6 2E-05 44.4 12.2 147 47-222 53-232 (325)
77 4fb5_A Probable oxidoreductase 93.9 0.16 5.3E-06 47.8 8.1 77 52-132 68-144 (393)
78 1f6y_A 5-methyltetrahydrofolat 93.8 0.75 2.6E-05 42.5 12.6 153 47-218 53-229 (262)
79 2tps_A Protein (thiamin phosph 93.8 0.87 3E-05 39.8 12.6 124 49-213 65-195 (227)
80 1mxs_A KDPG aldolase; 2-keto-3 93.8 0.21 7.3E-06 45.2 8.5 104 50-192 64-169 (225)
81 3hgj_A Chromate reductase; TIM 93.8 2.4 8.3E-05 40.3 16.4 133 44-216 140-316 (349)
82 4had_A Probable oxidoreductase 93.7 0.1 3.5E-06 48.9 6.6 76 52-132 60-136 (350)
83 3bo9_A Putative nitroalkan dio 93.7 0.29 9.7E-06 46.4 9.7 74 53-127 115-196 (326)
84 1rqb_A Transcarboxylase 5S sub 93.7 0.37 1.3E-05 49.2 11.0 119 72-217 120-251 (539)
85 1wbh_A KHG/KDPG aldolase; lyas 93.7 0.31 1.1E-05 43.7 9.3 102 51-192 55-159 (214)
86 1qop_A Tryptophan synthase alp 93.4 2.7 9.3E-05 38.4 15.6 142 46-213 76-229 (268)
87 1ka9_F Imidazole glycerol phos 93.4 0.71 2.4E-05 41.2 11.3 135 49-213 62-220 (252)
88 4fxs_A Inosine-5'-monophosphat 93.3 0.52 1.8E-05 47.4 11.3 80 47-127 256-354 (496)
89 3khj_A Inosine-5-monophosphate 93.3 1.3 4.4E-05 42.7 13.7 145 46-214 78-232 (361)
90 2vp8_A Dihydropteroate synthas 93.3 3.7 0.00013 39.1 16.6 65 48-113 98-167 (318)
91 3zwt_A Dihydroorotate dehydrog 93.2 1.2 4.2E-05 43.0 13.5 115 105-254 219-353 (367)
92 4fo4_A Inosine 5'-monophosphat 93.2 0.52 1.8E-05 45.7 10.7 80 47-127 133-231 (366)
93 1rpx_A Protein (ribulose-phosp 93.1 0.41 1.4E-05 42.4 9.3 75 46-122 55-133 (230)
94 2gjl_A Hypothetical protein PA 93.1 0.51 1.7E-05 44.4 10.4 74 53-127 109-192 (328)
95 2yw3_A 4-hydroxy-2-oxoglutarat 93.1 0.44 1.5E-05 42.3 9.3 105 68-213 69-174 (207)
96 2nx9_A Oxaloacetate decarboxyl 93.0 0.95 3.2E-05 45.3 12.6 118 73-217 104-232 (464)
97 4h3v_A Oxidoreductase domain p 93.0 0.19 6.4E-06 47.2 7.1 75 52-131 49-124 (390)
98 1vzw_A Phosphoribosyl isomeras 93.0 0.59 2E-05 41.7 10.1 133 52-213 65-217 (244)
99 3mcm_A 2-amino-4-hydroxy-6-hyd 92.9 1.5 5.2E-05 43.7 13.7 52 61-113 268-322 (442)
100 1vc4_A Indole-3-glycerol phosp 92.9 0.11 3.8E-06 47.8 5.2 79 46-126 139-227 (254)
101 1h5y_A HISF; histidine biosynt 92.8 0.58 2E-05 41.1 9.8 136 50-213 65-222 (253)
102 2w6r_A Imidazole glycerol phos 92.8 0.86 3E-05 41.0 11.0 134 51-213 63-224 (266)
103 4gqa_A NAD binding oxidoreduct 92.8 0.35 1.2E-05 46.6 8.8 77 52-132 70-146 (412)
104 1thf_D HISF protein; thermophI 92.7 0.89 3E-05 40.5 11.0 136 49-213 61-219 (253)
105 3qja_A IGPS, indole-3-glycerol 92.5 3.1 0.0001 38.5 14.6 131 50-213 101-237 (272)
106 3ewb_X 2-isopropylmalate synth 92.5 1.2 4.2E-05 41.6 12.0 96 98-222 126-231 (293)
107 2ztj_A Homocitrate synthase; ( 92.4 1.5 5.2E-05 42.5 12.8 172 44-222 20-223 (382)
108 2dqw_A Dihydropteroate synthas 92.3 2.5 8.6E-05 39.8 13.8 64 49-113 87-153 (294)
109 2y88_A Phosphoribosyl isomeras 92.3 0.77 2.6E-05 40.7 9.9 132 52-213 64-220 (244)
110 1eep_A Inosine 5'-monophosphat 92.3 0.81 2.8E-05 44.4 10.8 77 50-127 180-276 (404)
111 3r2g_A Inosine 5'-monophosphat 92.2 0.72 2.5E-05 44.7 10.3 76 51-127 129-219 (361)
112 2z6i_A Trans-2-enoyl-ACP reduc 92.2 0.41 1.4E-05 45.2 8.4 73 54-127 102-182 (332)
113 3tr9_A Dihydropteroate synthas 92.2 2.5 8.7E-05 40.2 13.8 54 59-113 102-155 (314)
114 1wa3_A 2-keto-3-deoxy-6-phosph 92.2 0.29 9.9E-06 42.5 6.7 65 52-116 94-160 (205)
115 3oqb_A Oxidoreductase; structu 92.1 0.68 2.3E-05 44.0 9.8 74 53-131 58-132 (383)
116 3v5n_A Oxidoreductase; structu 92.0 0.49 1.7E-05 46.0 8.8 78 52-132 77-160 (417)
117 3gr7_A NADPH dehydrogenase; fl 91.9 4.7 0.00016 38.3 15.5 134 44-216 132-305 (340)
118 1gox_A (S)-2-hydroxy-acid oxid 91.9 0.9 3.1E-05 43.8 10.5 76 51-127 214-300 (370)
119 1yxy_A Putative N-acetylmannos 91.9 0.66 2.3E-05 41.1 8.9 76 51-127 120-206 (234)
120 1rd5_A Tryptophan synthase alp 91.7 4.7 0.00016 36.3 14.6 143 46-213 77-225 (262)
121 1jcn_A Inosine monophosphate d 91.7 0.5 1.7E-05 47.3 8.7 76 51-127 284-378 (514)
122 1f76_A Dihydroorotate dehydrog 91.7 1.4 4.7E-05 41.5 11.3 88 106-216 211-316 (336)
123 3rmj_A 2-isopropylmalate synth 91.6 1 3.4E-05 43.7 10.5 53 166-222 180-238 (370)
124 2c6q_A GMP reductase 2; TIM ba 91.6 1 3.5E-05 43.2 10.5 80 47-127 145-243 (351)
125 3ohs_X Trans-1,2-dihydrobenzen 91.5 0.57 2E-05 43.7 8.5 75 53-132 41-116 (334)
126 3upl_A Oxidoreductase; rossman 91.4 0.03 1E-06 56.0 -0.6 56 275-332 356-419 (446)
127 1ypf_A GMP reductase; GUAC, pu 91.4 0.76 2.6E-05 43.6 9.2 79 48-127 134-230 (336)
128 1zh8_A Oxidoreductase; TM0312, 91.3 0.89 3E-05 42.7 9.6 75 53-132 57-132 (340)
129 3tsm_A IGPS, indole-3-glycerol 91.3 4 0.00014 37.9 13.9 136 52-220 110-253 (272)
130 3bw2_A 2-nitropropane dioxygen 91.3 1.3 4.3E-05 42.5 10.8 73 54-127 137-228 (369)
131 2qr6_A IMP dehydrogenase/GMP r 91.2 1.5 5.1E-05 42.3 11.3 78 47-126 140-229 (393)
132 3rc1_A Sugar 3-ketoreductase; 91.2 1 3.6E-05 42.4 10.0 74 52-131 64-138 (350)
133 4hb7_A Dihydropteroate synthas 91.1 5.2 0.00018 37.3 14.4 58 55-112 74-131 (270)
134 2y5s_A DHPS, dihydropteroate s 91.1 1.5 5.2E-05 41.2 10.9 65 48-113 80-147 (294)
135 3o63_A Probable thiamine-phosp 90.9 4.9 0.00017 36.5 13.8 124 51-213 85-214 (243)
136 4avf_A Inosine-5'-monophosphat 90.8 0.82 2.8E-05 45.8 9.2 115 69-213 228-356 (490)
137 2h9a_B CO dehydrogenase/acetyl 90.8 2.8 9.6E-05 39.7 12.4 78 51-131 111-196 (310)
138 3db2_A Putative NADPH-dependen 90.8 1 3.6E-05 42.2 9.5 74 53-132 42-116 (354)
139 2qr6_A IMP dehydrogenase/GMP r 90.7 0.87 3E-05 44.0 9.1 77 50-127 199-297 (393)
140 3uuw_A Putative oxidoreductase 90.6 0.8 2.7E-05 42.1 8.4 73 53-132 44-116 (308)
141 4fxs_A Inosine-5'-monophosphat 90.6 1 3.6E-05 45.2 9.8 115 69-213 230-358 (496)
142 1r30_A Biotin synthase; SAM ra 90.5 12 0.0004 35.3 18.4 142 46-214 131-306 (369)
143 3vnd_A TSA, tryptophan synthas 90.4 7 0.00024 36.1 14.6 168 1-213 43-230 (267)
144 3f4w_A Putative hexulose 6 pho 90.4 1.6 5.6E-05 37.7 9.8 121 62-213 53-182 (211)
145 3moi_A Probable dehydrogenase; 90.4 1 3.5E-05 43.0 9.2 74 54-132 41-114 (387)
146 3b0p_A TRNA-dihydrouridine syn 90.4 4.4 0.00015 38.6 13.6 115 75-213 76-220 (350)
147 1vrd_A Inosine-5'-monophosphat 90.3 1.7 5.7E-05 43.2 10.9 80 47-127 262-360 (494)
148 3l5l_A Xenobiotic reductase A; 90.2 5.8 0.0002 37.9 14.4 136 44-216 146-323 (363)
149 3tdn_A FLR symmetric alpha-bet 90.2 0.12 4.3E-06 46.4 2.4 55 51-105 68-124 (247)
150 3hgj_A Chromate reductase; TIM 90.2 1.1 3.8E-05 42.7 9.2 119 1-127 163-308 (349)
151 3u3x_A Oxidoreductase; structu 90.1 0.67 2.3E-05 44.0 7.6 75 52-131 62-137 (361)
152 3gr7_A NADPH dehydrogenase; fl 90.1 1.3 4.4E-05 42.2 9.6 118 1-127 155-297 (340)
153 3dty_A Oxidoreductase, GFO/IDH 90.1 0.72 2.4E-05 44.3 7.9 78 52-132 52-135 (398)
154 1xm3_A Thiazole biosynthesis p 90.1 0.73 2.5E-05 42.3 7.5 78 49-127 110-198 (264)
155 4e38_A Keto-hydroxyglutarate-a 90.0 0.7 2.4E-05 42.1 7.2 79 50-133 115-196 (232)
156 2ffi_A 2-pyrone-4,6-dicarboxyl 89.9 1.3 4.4E-05 39.9 9.0 119 50-196 68-200 (288)
157 1qo2_A Molecule: N-((5-phospho 89.4 0.54 1.8E-05 42.0 6.0 132 50-210 62-209 (241)
158 3ip3_A Oxidoreductase, putativ 89.3 0.69 2.4E-05 43.3 6.9 79 51-132 39-117 (337)
159 4ef8_A Dihydroorotate dehydrog 89.2 2.2 7.5E-05 41.1 10.5 173 61-255 125-333 (354)
160 3nav_A Tryptophan synthase alp 89.2 7.2 0.00025 36.1 13.6 168 1-213 45-232 (271)
161 1h1y_A D-ribulose-5-phosphate 89.1 1.3 4.5E-05 39.4 8.3 76 45-122 50-128 (228)
162 3q2i_A Dehydrogenase; rossmann 89.1 1.5 5E-05 41.2 9.0 75 52-131 50-124 (354)
163 3ezy_A Dehydrogenase; structur 89.0 1.4 4.8E-05 41.2 8.8 75 53-132 39-114 (344)
164 3lab_A Putative KDPG (2-keto-3 89.0 1.4 4.7E-05 39.9 8.3 105 49-193 50-163 (217)
165 2zbt_A Pyridoxal biosynthesis 88.9 0.69 2.4E-05 42.8 6.5 71 51-125 67-141 (297)
166 2ekc_A AQ_1548, tryptophan syn 88.9 5.5 0.00019 36.3 12.5 164 46-248 76-258 (262)
167 2e6f_A Dihydroorotate dehydrog 88.8 0.96 3.3E-05 42.0 7.4 126 97-255 150-300 (314)
168 3usb_A Inosine-5'-monophosphat 88.5 2.3 7.9E-05 42.8 10.5 80 47-127 281-379 (511)
169 1jcn_A Inosine monophosphate d 88.3 11 0.00037 37.6 15.2 120 71-214 256-383 (514)
170 2qf7_A Pyruvate carboxylase pr 88.2 2.1 7E-05 47.5 10.6 48 167-217 733-783 (1165)
171 1eep_A Inosine 5'-monophosphat 88.0 1.5 5.1E-05 42.5 8.5 119 72-214 155-281 (404)
172 3f4w_A Putative hexulose 6 pho 87.9 1.7 5.9E-05 37.6 8.1 76 48-125 89-176 (211)
173 3e9m_A Oxidoreductase, GFO/IDH 87.9 2 7E-05 39.9 9.1 74 53-131 42-116 (330)
174 1p4c_A L(+)-mandelate dehydrog 87.8 1.7 5.8E-05 42.0 8.7 76 51-127 214-298 (380)
175 1vrd_A Inosine-5'-monophosphat 87.7 2.3 8E-05 42.1 9.9 120 72-215 239-366 (494)
176 2htm_A Thiazole biosynthesis p 87.4 1.9 6.6E-05 40.2 8.4 78 50-128 109-199 (268)
177 3k13_A 5-methyltetrahydrofolat 87.4 19 0.00065 33.8 15.7 175 49-245 67-274 (300)
178 3kru_A NADH:flavin oxidoreduct 87.4 17 0.00057 34.6 15.3 135 44-216 131-305 (343)
179 3e18_A Oxidoreductase; dehydro 87.4 2.1 7.2E-05 40.5 9.0 70 57-132 45-115 (359)
180 1z41_A YQJM, probable NADH-dep 87.3 2.6 9.1E-05 39.8 9.6 118 1-127 155-297 (338)
181 3o74_A Fructose transport syst 87.3 3.1 0.00011 36.2 9.5 86 49-134 19-121 (272)
182 3nav_A Tryptophan synthase alp 87.1 2 6.8E-05 39.9 8.4 81 46-127 134-228 (271)
183 3mz0_A Inositol 2-dehydrogenas 87.1 1.6 5.6E-05 40.7 8.0 76 53-132 40-116 (344)
184 1zfj_A Inosine monophosphate d 87.0 3.7 0.00013 40.5 10.9 78 49-127 260-356 (491)
185 1geq_A Tryptophan synthase alp 87.0 5.2 0.00018 35.4 10.9 132 51-213 69-215 (248)
186 2ixa_A Alpha-N-acetylgalactosa 87.0 3.2 0.00011 40.4 10.2 85 47-132 54-141 (444)
187 3kux_A Putative oxidoreductase 86.9 1.9 6.6E-05 40.4 8.4 57 76-132 61-117 (352)
188 3m5v_A DHDPS, dihydrodipicolin 86.9 17 0.00058 33.7 14.8 152 44-247 55-229 (301)
189 3ec7_A Putative dehydrogenase; 86.9 1.4 4.8E-05 41.6 7.4 76 53-132 61-137 (357)
190 3oix_A Putative dihydroorotate 86.8 8.7 0.0003 36.8 13.0 171 60-255 126-331 (345)
191 3cea_A MYO-inositol 2-dehydrog 86.7 2.3 8E-05 39.4 8.8 75 53-132 46-121 (346)
192 3b0p_A TRNA-dihydrouridine syn 86.7 4.5 0.00015 38.5 10.9 78 49-127 112-217 (350)
193 1ydw_A AX110P-like protein; st 86.7 2.1 7E-05 40.3 8.5 77 53-131 43-120 (362)
194 3sr7_A Isopentenyl-diphosphate 86.7 3.5 0.00012 39.9 10.2 78 49-127 193-298 (365)
195 4hkt_A Inositol 2-dehydrogenas 86.6 2.2 7.4E-05 39.6 8.5 72 53-131 40-112 (331)
196 2vc6_A MOSA, dihydrodipicolina 86.5 20 0.00068 33.0 15.5 152 44-247 48-222 (292)
197 3gdo_A Uncharacterized oxidore 86.4 1.8 6.1E-05 40.9 7.8 57 76-132 59-115 (358)
198 2nli_A Lactate oxidase; flavoe 86.2 3.6 0.00012 39.6 10.0 79 45-127 215-304 (368)
199 2nv1_A Pyridoxal biosynthesis 85.9 2.3 8E-05 39.5 8.2 71 52-126 68-142 (305)
200 3euw_A MYO-inositol dehydrogen 85.8 2.2 7.6E-05 39.7 8.1 73 53-131 41-114 (344)
201 2v82_A 2-dehydro-3-deoxy-6-pho 85.7 2.3 7.8E-05 36.9 7.6 72 52-125 91-165 (212)
202 3lab_A Putative KDPG (2-keto-3 85.6 2.2 7.4E-05 38.6 7.6 82 47-133 91-181 (217)
203 1gte_A Dihydropyrimidine dehyd 85.6 11 0.00037 40.9 14.4 67 177-255 775-843 (1025)
204 1tlt_A Putative oxidoreductase 85.5 2.7 9.3E-05 38.7 8.5 69 56-131 46-114 (319)
205 3qk7_A Transcriptional regulat 85.4 7.2 0.00025 34.7 11.1 85 49-134 27-127 (294)
206 3i23_A Oxidoreductase, GFO/IDH 85.4 1.6 5.6E-05 40.9 7.0 57 76-132 59-115 (349)
207 1lc0_A Biliverdin reductase A; 85.4 1.4 4.9E-05 40.5 6.5 59 74-132 56-115 (294)
208 2rgy_A Transcriptional regulat 85.3 9.3 0.00032 33.8 11.8 85 49-134 25-129 (290)
209 3k4h_A Putative transcriptiona 85.3 11 0.00036 33.1 12.1 85 49-134 30-132 (292)
210 2qjg_A Putative aldolase MJ040 85.3 17 0.00057 32.6 13.6 108 72-213 102-232 (273)
211 3ivs_A Homocitrate synthase, m 85.1 9.8 0.00033 37.5 12.6 51 167-222 204-257 (423)
212 4gj1_A 1-(5-phosphoribosyl)-5- 85.0 6.6 0.00022 35.4 10.6 122 51-200 64-207 (243)
213 3tb6_A Arabinose metabolism tr 84.8 11 0.00039 32.9 12.0 86 49-134 32-138 (298)
214 3fhl_A Putative oxidoreductase 84.7 1.8 6.3E-05 40.8 7.0 57 76-132 59-115 (362)
215 2h9a_A Carbon monoxide dehydro 84.7 7.4 0.00025 38.7 11.6 80 46-131 138-222 (445)
216 2nzl_A Hydroxyacid oxidase 1; 84.7 3.2 0.00011 40.4 8.9 78 46-127 239-327 (392)
217 1o5k_A DHDPS, dihydrodipicolin 84.6 15 0.0005 34.2 13.2 154 42-248 58-238 (306)
218 2p2s_A Putative oxidoreductase 84.6 2.3 7.8E-05 39.5 7.6 57 76-132 60-116 (336)
219 1p0k_A Isopentenyl-diphosphate 84.6 4.5 0.00015 38.2 9.7 77 50-127 166-271 (349)
220 3l5l_A Xenobiotic reductase A; 84.5 1 3.6E-05 43.2 5.3 119 1-127 169-315 (363)
221 2ho3_A Oxidoreductase, GFO/IDH 84.5 3.1 0.00011 38.4 8.4 72 54-131 39-111 (325)
222 3eeg_A 2-isopropylmalate synth 84.3 13 0.00044 35.1 12.7 149 45-249 24-192 (325)
223 2pln_A HP1043, response regula 84.2 6.6 0.00023 30.3 9.1 79 46-127 26-106 (137)
224 3brq_A HTH-type transcriptiona 84.2 10 0.00035 33.2 11.4 86 48-134 37-140 (296)
225 1xea_A Oxidoreductase, GFO/IDH 84.1 2.8 9.5E-05 38.8 7.8 75 53-132 39-113 (323)
226 2glx_A 1,5-anhydro-D-fructose 84.0 3.5 0.00012 38.0 8.5 74 54-132 38-112 (332)
227 3eod_A Protein HNR; response r 84.0 12 0.0004 28.4 10.4 80 47-127 16-99 (130)
228 3bbl_A Regulatory protein of L 84.0 11 0.00037 33.3 11.5 85 49-134 25-126 (287)
229 3d8u_A PURR transcriptional re 84.0 6.9 0.00024 34.0 10.1 85 49-134 20-121 (275)
230 2fli_A Ribulose-phosphate 3-ep 83.9 2.2 7.5E-05 37.1 6.7 74 45-122 47-124 (220)
231 3o9z_A Lipopolysaccaride biosy 83.9 2 6.8E-05 40.0 6.8 53 80-132 70-122 (312)
232 3e82_A Putative oxidoreductase 83.9 2.2 7.4E-05 40.4 7.1 57 76-132 61-117 (364)
233 3dxi_A Putative aldolase; TIM 83.6 1.1 3.6E-05 42.8 4.8 138 47-217 61-217 (320)
234 3e61_A Putative transcriptiona 83.6 8.3 0.00028 33.6 10.5 83 49-134 25-123 (277)
235 4adt_A Pyridoxine biosynthetic 83.6 4.8 0.00016 37.9 9.2 73 51-127 67-143 (297)
236 3ceu_A Thiamine phosphate pyro 83.6 2.1 7.2E-05 37.5 6.5 149 52-253 44-201 (210)
237 3b4u_A Dihydrodipicolinate syn 83.5 27 0.00094 32.1 16.0 149 44-244 51-226 (294)
238 3gt7_A Sensor protein; structu 83.3 8.9 0.0003 30.5 9.8 80 47-127 16-101 (154)
239 4ew6_A D-galactose-1-dehydroge 83.2 2.1 7.2E-05 40.1 6.7 57 76-132 74-131 (330)
240 1ypf_A GMP reductase; GUAC, pu 83.2 3.3 0.00011 39.2 8.1 134 50-213 82-234 (336)
241 3jy6_A Transcriptional regulat 83.1 10 0.00036 33.1 11.0 84 49-134 24-124 (276)
242 3gl9_A Response regulator; bet 83.1 11 0.00036 28.7 9.8 78 49-127 13-96 (122)
243 2h6r_A Triosephosphate isomera 82.9 3.7 0.00013 36.5 7.9 79 46-125 95-188 (219)
244 3oa2_A WBPB; oxidoreductase, s 82.9 2.6 8.9E-05 39.3 7.1 53 80-132 71-123 (318)
245 3vkj_A Isopentenyl-diphosphate 82.8 12 0.00042 36.0 12.1 74 178-256 256-331 (368)
246 3kts_A Glycerol uptake operon 82.8 4.7 0.00016 35.7 8.4 74 51-127 90-170 (192)
247 3r2g_A Inosine 5'-monophosphat 82.8 4.3 0.00015 39.2 8.8 54 158-216 114-167 (361)
248 3e3m_A Transcriptional regulat 82.8 12 0.0004 34.4 11.6 84 49-134 87-188 (355)
249 3btv_A Galactose/lactose metab 82.7 3.3 0.00011 40.4 8.0 76 53-131 62-144 (438)
250 1h6d_A Precursor form of gluco 82.6 2.1 7.2E-05 41.8 6.6 78 53-132 121-200 (433)
251 1ps9_A 2,4-dienoyl-COA reducta 82.4 42 0.0014 34.2 16.6 146 49-216 81-308 (671)
252 1vcf_A Isopentenyl-diphosphate 82.4 4 0.00014 38.3 8.3 75 51-127 171-276 (332)
253 3gv0_A Transcriptional regulat 82.4 8.8 0.0003 33.9 10.3 85 49-134 27-128 (288)
254 3evn_A Oxidoreductase, GFO/IDH 82.3 3 0.0001 38.6 7.4 57 76-132 61-117 (329)
255 3dbi_A Sugar-binding transcrip 82.3 10 0.00035 34.4 10.9 86 49-134 80-182 (338)
256 3hdg_A Uncharacterized protein 82.3 9.8 0.00034 29.2 9.4 63 176-254 66-130 (137)
257 3qtg_A Pyruvate kinase, PK; TI 82.1 3.9 0.00013 40.9 8.4 87 47-134 207-317 (461)
258 2nvw_A Galactose/lactose metab 82.0 3.6 0.00012 40.8 8.2 75 52-132 80-164 (479)
259 1vhc_A Putative KHG/KDPG aldol 82.0 23 0.00077 31.6 12.8 120 56-218 12-137 (224)
260 3m2t_A Probable dehydrogenase; 81.6 2.3 7.9E-05 40.1 6.3 56 76-131 62-117 (359)
261 2bmb_A Folic acid synthesis pr 81.3 19 0.00065 36.7 13.2 52 61-112 310-362 (545)
262 4djd_D C/Fe-SP, corrinoid/iron 81.1 11 0.00038 35.8 10.9 77 52-131 119-203 (323)
263 1vcf_A Isopentenyl-diphosphate 81.0 7.2 0.00025 36.6 9.5 76 176-256 243-320 (332)
264 3kke_A LACI family transcripti 80.8 26 0.0009 31.1 12.9 86 48-134 31-132 (303)
265 3cnb_A DNA-binding response re 80.7 14 0.00049 28.2 9.8 79 47-126 17-103 (143)
266 3t6k_A Response regulator rece 80.6 17 0.00059 28.0 10.4 78 49-127 15-98 (136)
267 2gou_A Oxidoreductase, FMN-bin 80.6 10 0.00035 36.3 10.6 122 1-134 172-316 (365)
268 1ep3_A Dihydroorotate dehydrog 80.2 15 0.0005 33.5 11.2 78 49-127 150-261 (311)
269 3heb_A Response regulator rece 80.1 12 0.00042 29.3 9.4 66 176-257 74-143 (152)
270 3f4l_A Putative oxidoreductase 80.0 2.5 8.7E-05 39.4 6.0 57 76-132 59-115 (345)
271 1icp_A OPR1, 12-oxophytodienoa 80.0 43 0.0015 32.0 15.4 39 176-216 289-328 (376)
272 3clk_A Transcription regulator 80.0 10 0.00034 33.5 9.7 85 49-134 25-126 (290)
273 3s5o_A 4-hydroxy-2-oxoglutarat 80.0 38 0.0013 31.4 16.2 151 44-247 62-238 (307)
274 2h0a_A TTHA0807, transcription 79.7 6 0.00021 34.5 8.1 85 49-134 16-115 (276)
275 3hv2_A Response regulator/HD d 79.6 14 0.00047 29.1 9.6 80 47-127 23-106 (153)
276 3noy_A 4-hydroxy-3-methylbut-2 79.5 7.6 0.00026 37.7 9.1 66 47-112 69-139 (366)
277 3hcw_A Maltose operon transcri 79.4 28 0.00096 30.7 12.6 85 49-134 29-132 (295)
278 2iks_A DNA-binding transcripti 79.3 8.9 0.00031 33.9 9.2 86 49-134 37-139 (293)
279 3h5o_A Transcriptional regulat 79.3 20 0.00068 32.5 11.8 87 46-134 76-179 (339)
280 3rmj_A 2-isopropylmalate synth 79.2 7.4 0.00025 37.6 9.1 149 45-249 30-198 (370)
281 3ovp_A Ribulose-phosphate 3-ep 79.1 10 0.00035 33.9 9.5 139 44-215 47-194 (228)
282 3i65_A Dihydroorotate dehydrog 78.9 14 0.00048 36.4 11.0 129 106-254 268-400 (415)
283 3usb_A Inosine-5'-monophosphat 78.7 7.1 0.00024 39.2 9.1 118 72-213 258-383 (511)
284 3egc_A Putative ribose operon 78.6 12 0.00042 32.9 9.8 85 49-134 25-126 (291)
285 3hg3_A Alpha-galactosidase A; 78.5 4 0.00014 40.1 7.0 65 49-113 84-171 (404)
286 4drs_A Pyruvate kinase; glycol 78.5 7.5 0.00026 39.5 9.2 87 47-134 240-357 (526)
287 2nv1_A Pyridoxal biosynthesis 78.4 3.5 0.00012 38.3 6.3 69 58-127 121-229 (305)
288 3huu_A Transcription regulator 78.3 23 0.00079 31.4 11.7 85 49-134 44-145 (305)
289 3sgz_A Hydroxyacid oxidase 2; 78.2 11 0.00038 36.2 10.0 78 46-127 204-292 (352)
290 2pcq_A Putative dihydrodipicol 78.1 25 0.00087 32.2 12.1 148 44-247 45-212 (283)
291 3cz5_A Two-component response 77.8 20 0.00068 28.1 10.1 44 176-220 66-111 (153)
292 4ab4_A Xenobiotic reductase B; 77.8 7.2 0.00025 37.5 8.5 116 1-126 164-297 (362)
293 3tha_A Tryptophan synthase alp 77.6 5.4 0.00019 36.7 7.3 81 46-127 125-219 (252)
294 2uva_G Fatty acid synthase bet 77.6 30 0.001 40.7 14.9 147 46-213 618-790 (2060)
295 2nli_A Lactate oxidase; flavoe 77.6 13 0.00044 35.7 10.3 129 94-255 216-348 (368)
296 3tdn_A FLR symmetric alpha-bet 77.5 6.8 0.00023 34.8 7.8 35 92-127 64-99 (247)
297 1ep3_A Dihydroorotate dehydrog 77.4 7.7 0.00026 35.4 8.3 87 106-217 98-195 (311)
298 3rot_A ABC sugar transporter, 77.4 37 0.0013 29.9 12.7 84 49-132 20-127 (297)
299 1p4c_A L(+)-mandelate dehydrog 77.0 13 0.00043 35.8 10.1 126 94-255 212-342 (380)
300 3ewb_X 2-isopropylmalate synth 76.8 16 0.00056 33.8 10.5 150 44-249 22-191 (293)
301 3gtx_A Organophosphorus hydrol 76.3 18 0.00061 34.2 10.8 112 51-196 92-244 (339)
302 3hdv_A Response regulator; PSI 76.3 17 0.00059 27.7 9.0 78 48-126 17-100 (136)
303 4gmf_A Yersiniabactin biosynth 76.3 11 0.00037 36.2 9.4 73 52-133 43-119 (372)
304 1srr_A SPO0F, sporulation resp 76.2 20 0.00069 26.8 9.3 78 49-127 14-95 (124)
305 3gka_A N-ethylmaleimide reduct 76.2 8.1 0.00028 37.1 8.4 116 1-126 172-305 (361)
306 2yw3_A 4-hydroxy-2-oxoglutarat 76.1 9 0.00031 33.6 8.1 78 52-134 94-174 (207)
307 1f6k_A N-acetylneuraminate lya 76.1 48 0.0016 30.4 14.6 134 42-215 50-205 (293)
308 2agk_A 1-(5-phosphoribosyl)-5- 76.0 8.7 0.0003 35.0 8.2 54 73-128 162-226 (260)
309 3eod_A Protein HNR; response r 75.9 15 0.0005 27.9 8.5 43 176-219 66-110 (130)
310 3jte_A Response regulator rece 75.9 24 0.00083 27.0 9.9 79 48-127 13-97 (143)
311 1vyr_A Pentaerythritol tetrani 75.9 10 0.00036 36.2 9.1 89 41-134 208-317 (364)
312 2r14_A Morphinone reductase; H 75.8 57 0.002 31.2 16.0 39 176-216 287-326 (377)
313 3tva_A Xylose isomerase domain 75.8 29 0.00099 30.7 11.6 84 46-130 48-175 (290)
314 1h5y_A HISF; histidine biosynt 75.7 9.2 0.00031 33.2 8.0 53 73-126 158-217 (253)
315 2fep_A Catabolite control prot 75.7 22 0.00076 31.3 10.7 85 49-134 33-134 (289)
316 3vnd_A TSA, tryptophan synthas 75.6 6.3 0.00022 36.4 7.2 81 46-127 132-226 (267)
317 3ih1_A Methylisocitrate lyase; 75.4 14 0.00048 34.9 9.6 83 51-134 18-119 (305)
318 3f6p_A Transcriptional regulat 75.4 18 0.00061 27.2 8.8 77 49-126 13-92 (120)
319 2qr3_A Two-component system re 75.4 8 0.00027 29.7 6.8 78 48-126 13-99 (140)
320 1me8_A Inosine-5'-monophosphat 75.3 11 0.00039 37.5 9.5 81 47-128 267-373 (503)
321 3l6u_A ABC-type sugar transpor 75.3 10 0.00035 33.3 8.3 65 49-113 25-96 (293)
322 1ujp_A Tryptophan synthase alp 75.1 11 0.00037 34.7 8.6 79 46-125 128-220 (271)
323 1q7z_A 5-methyltetrahydrofolat 75.1 44 0.0015 34.0 13.9 145 47-218 368-538 (566)
324 2qxy_A Response regulator; reg 75.0 14 0.00048 28.5 8.2 79 48-127 14-95 (142)
325 3lua_A Response regulator rece 75.0 7.1 0.00024 30.2 6.5 78 48-126 14-100 (140)
326 1mzh_A Deoxyribose-phosphate a 74.9 18 0.00062 32.0 9.9 56 70-126 129-194 (225)
327 1qo2_A Molecule: N-((5-phospho 74.9 12 0.0004 33.0 8.6 53 75-128 150-209 (241)
328 3hzh_A Chemotaxis response reg 74.9 21 0.00071 28.3 9.4 80 47-127 45-131 (157)
329 3p6l_A Sugar phosphate isomera 74.4 13 0.00046 32.5 8.8 83 45-127 59-153 (262)
330 1ka9_F Imidazole glycerol phos 74.4 11 0.00038 33.2 8.3 54 73-127 156-216 (252)
331 2ekc_A AQ_1548, tryptophan syn 74.4 11 0.00037 34.3 8.3 78 46-124 131-223 (262)
332 3daq_A DHDPS, dihydrodipicolin 74.3 53 0.0018 30.1 13.4 151 44-247 50-224 (292)
333 1p0k_A Isopentenyl-diphosphate 74.2 45 0.0015 31.2 13.0 178 62-255 116-315 (349)
334 1qop_A Tryptophan synthase alp 74.2 13 0.00045 33.7 8.9 81 46-127 131-225 (268)
335 1vhn_A Putative flavin oxidore 74.2 9.4 0.00032 35.5 8.1 134 49-214 48-209 (318)
336 3qfe_A Putative dihydrodipicol 74.2 49 0.0017 30.9 13.1 152 44-247 59-237 (318)
337 2e6f_A Dihydroorotate dehydrog 74.1 25 0.00086 32.2 10.9 91 105-220 92-197 (314)
338 3m9w_A D-xylose-binding peripl 74.1 14 0.00048 32.9 9.0 87 48-134 18-124 (313)
339 3cg0_A Response regulator rece 73.8 19 0.00065 27.4 8.7 78 48-126 19-101 (140)
340 2y1h_A Putative deoxyribonucle 73.7 47 0.0016 29.2 12.7 83 97-217 130-215 (272)
341 1tmy_A CHEY protein, TMY; chem 73.5 25 0.00085 26.0 10.7 100 98-246 18-118 (120)
342 3hdg_A Uncharacterized protein 73.5 28 0.00095 26.5 9.9 79 48-127 17-99 (137)
343 2nzl_A Hydroxyacid oxidase 1; 73.4 14 0.00047 35.9 9.3 129 94-255 239-371 (392)
344 3k2g_A Resiniferatoxin-binding 73.3 25 0.00085 33.6 11.0 114 50-196 114-263 (364)
345 3sr7_A Isopentenyl-diphosphate 73.2 24 0.00084 33.9 10.9 128 46-216 100-235 (365)
346 3k9c_A Transcriptional regulat 73.1 14 0.00047 32.7 8.6 84 49-134 28-127 (289)
347 2w6r_A Imidazole glycerol phos 73.1 11 0.00036 33.7 7.9 53 74-127 161-220 (266)
348 3kht_A Response regulator; PSI 73.0 25 0.00086 27.1 9.3 79 48-127 15-101 (144)
349 3c1a_A Putative oxidoreductase 72.8 7.4 0.00025 35.7 7.0 57 76-132 63-119 (315)
350 4h3d_A 3-dehydroquinate dehydr 72.6 6.8 0.00023 35.8 6.6 111 46-185 123-251 (258)
351 1w3i_A EDA, 2-keto-3-deoxy glu 72.5 58 0.002 29.9 13.0 151 42-248 45-215 (293)
352 1nsj_A PRAI, phosphoribosyl an 72.5 36 0.0012 29.9 11.1 164 46-248 38-204 (205)
353 3eoo_A Methylisocitrate lyase; 72.4 17 0.0006 34.1 9.4 81 53-134 13-113 (298)
354 1sfl_A 3-dehydroquinate dehydr 72.4 19 0.00066 32.3 9.4 68 47-114 110-195 (238)
355 1wbh_A KHG/KDPG aldolase; lyas 72.3 18 0.00063 31.9 9.2 76 51-131 98-176 (214)
356 2y7e_A 3-keto-5-aminohexanoate 72.3 2.1 7.1E-05 40.2 3.0 52 187-249 26-79 (282)
357 3c3k_A Alanine racemase; struc 72.1 21 0.00071 31.4 9.5 84 49-134 25-125 (285)
358 1mb3_A Cell division response 72.0 20 0.00068 26.7 8.2 77 49-126 12-94 (124)
359 1thf_D HISF protein; thermophI 71.8 16 0.00054 32.2 8.7 54 73-127 155-215 (253)
360 1vzw_A Phosphoribosyl isomeras 71.8 12 0.00039 33.0 7.7 54 73-127 150-210 (244)
361 3vk5_A MOEO5; TIM barrel, tran 71.8 3.9 0.00013 38.5 4.7 61 49-111 29-101 (286)
362 3ju3_A Probable 2-oxoacid ferr 71.5 34 0.0012 27.2 9.8 100 108-246 16-115 (118)
363 3flu_A DHDPS, dihydrodipicolin 71.5 31 0.0011 31.8 10.9 28 106-134 76-104 (297)
364 3vkj_A Isopentenyl-diphosphate 71.4 23 0.00078 34.1 10.3 78 49-127 174-287 (368)
365 2rjn_A Response regulator rece 71.4 19 0.00065 28.2 8.3 79 47-126 16-98 (154)
366 1ub3_A Aldolase protein; schif 71.4 7.6 0.00026 34.8 6.4 83 48-134 106-200 (220)
367 2o20_A Catabolite control prot 71.4 32 0.0011 31.0 10.9 85 49-134 80-181 (332)
368 1vc4_A Indole-3-glycerol phosp 71.3 19 0.00066 32.6 9.3 73 51-128 95-173 (254)
369 3lte_A Response regulator; str 71.3 30 0.001 26.0 10.1 77 48-126 16-98 (132)
370 3chv_A Prokaryotic domain of u 71.3 2.8 9.4E-05 39.3 3.6 52 187-249 26-79 (284)
371 3si9_A DHDPS, dihydrodipicolin 71.2 46 0.0016 31.0 12.2 152 44-247 70-244 (315)
372 3kht_A Response regulator; PSI 71.1 21 0.00073 27.5 8.5 64 176-254 66-133 (144)
373 1jvn_A Glutamine, bifunctional 71.1 8.4 0.00029 39.0 7.4 54 73-127 456-516 (555)
374 1k68_A Phytochrome response re 70.7 31 0.0011 25.9 9.4 79 48-127 12-105 (140)
375 2zay_A Response regulator rece 70.7 20 0.00067 27.7 8.2 75 52-127 22-102 (147)
376 3tak_A DHDPS, dihydrodipicolin 70.5 25 0.00087 32.3 10.1 28 106-134 70-98 (291)
377 3qhp_A Type 1 capsular polysac 70.4 14 0.00049 29.4 7.4 61 51-113 44-106 (166)
378 3irs_A Uncharacterized protein 70.4 50 0.0017 29.8 12.0 143 50-233 78-247 (291)
379 2r91_A 2-keto-3-deoxy-(6-phosp 70.3 65 0.0022 29.4 13.3 147 44-247 46-213 (286)
380 4e7p_A Response regulator; DNA 70.2 14 0.00047 29.0 7.2 82 122-246 55-137 (150)
381 1bf6_A Phosphotriesterase homo 70.1 33 0.0011 30.2 10.5 66 98-196 143-209 (291)
382 1kbi_A Cytochrome B2, L-LCR; f 70.1 17 0.00058 36.5 9.4 126 95-255 331-467 (511)
383 3jte_A Response regulator rece 69.9 30 0.001 26.5 9.1 61 176-252 64-126 (143)
384 3o1n_A 3-dehydroquinate dehydr 69.9 21 0.00073 32.9 9.3 109 46-184 143-270 (276)
385 1mxs_A KDPG aldolase; 2-keto-3 69.9 38 0.0013 30.1 10.7 127 51-218 16-146 (225)
386 1f76_A Dihydroorotate dehydrog 69.7 12 0.00042 34.8 7.8 82 45-127 188-309 (336)
387 3l21_A DHDPS, dihydrodipicolin 69.6 23 0.00079 32.9 9.6 59 75-134 42-112 (304)
388 3lmz_A Putative sugar isomeras 69.6 13 0.00046 32.5 7.6 69 45-114 57-134 (257)
389 1v5x_A PRA isomerase, phosphor 69.4 34 0.0012 30.1 10.2 160 46-248 37-198 (203)
390 1k66_A Phytochrome response re 69.4 35 0.0012 26.0 9.4 79 47-126 15-111 (149)
391 1tv5_A Dhodehase, dihydroorota 69.4 23 0.00078 35.1 9.9 118 105-255 295-429 (443)
392 4i6k_A Amidohydrolase family p 69.3 23 0.0008 32.0 9.4 118 51-196 82-213 (294)
393 1jub_A Dihydroorotate dehydrog 69.2 11 0.00039 34.5 7.4 90 106-220 93-194 (311)
394 2gou_A Oxidoreductase, FMN-bin 69.1 80 0.0027 30.0 15.2 133 44-216 149-320 (365)
395 3no5_A Uncharacterized protein 69.0 3.8 0.00013 38.2 4.0 43 201-249 33-75 (275)
396 3cpr_A Dihydrodipicolinate syn 69.0 35 0.0012 31.6 10.8 72 62-134 19-113 (304)
397 1s2w_A Phosphoenolpyruvate pho 69.0 25 0.00086 32.8 9.7 81 53-134 10-109 (295)
398 1o94_A Tmadh, trimethylamine d 69.0 1.1E+02 0.0038 31.5 16.5 149 49-216 84-319 (729)
399 3f6c_A Positive transcription 68.9 17 0.00057 27.6 7.2 43 176-219 61-105 (134)
400 1tqj_A Ribulose-phosphate 3-ep 68.8 3.4 0.00012 36.9 3.6 77 44-123 47-128 (230)
401 1kbi_A Cytochrome B2, L-LCR; f 68.7 28 0.00095 35.0 10.6 79 45-127 329-423 (511)
402 3heb_A Response regulator rece 68.7 33 0.0011 26.7 9.2 80 47-127 13-109 (152)
403 2hjp_A Phosphonopyruvate hydro 68.7 27 0.00093 32.5 9.8 81 53-134 6-105 (290)
404 1vcv_A Probable deoxyribose-ph 68.6 10 0.00036 34.2 6.7 81 48-129 101-206 (226)
405 3qze_A DHDPS, dihydrodipicolin 68.5 23 0.00077 33.2 9.3 59 75-134 50-120 (314)
406 2tps_A Protein (thiamin phosph 68.1 16 0.00055 31.5 7.7 70 54-125 107-189 (227)
407 3rqi_A Response regulator prot 68.0 31 0.001 28.3 9.2 79 48-127 17-99 (184)
408 3na8_A Putative dihydrodipicol 68.0 12 0.00041 35.1 7.3 113 75-194 51-184 (315)
409 3b2n_A Uncharacterized protein 67.7 18 0.00062 27.7 7.3 81 123-246 39-120 (133)
410 3vzx_A Heptaprenylglyceryl pho 67.6 70 0.0024 28.7 12.2 155 46-247 43-226 (228)
411 1dbq_A Purine repressor; trans 67.6 33 0.0011 29.8 9.8 85 49-134 24-127 (289)
412 3si9_A DHDPS, dihydrodipicolin 67.5 14 0.00047 34.7 7.6 28 106-134 91-119 (315)
413 3g1w_A Sugar ABC transporter; 67.4 23 0.0008 31.1 8.9 65 49-113 21-93 (305)
414 3ilh_A Two component response 67.4 39 0.0013 25.7 10.1 79 48-127 19-112 (146)
415 2wkj_A N-acetylneuraminate lya 67.4 27 0.00093 32.4 9.6 59 75-134 38-108 (303)
416 3ab4_A Aspartokinase; aspartat 67.4 41 0.0014 32.5 11.2 38 85-122 5-50 (421)
417 1dbw_A Transcriptional regulat 67.3 37 0.0013 25.4 9.2 76 50-126 15-94 (126)
418 3l5a_A NADH/flavin oxidoreduct 67.3 7.5 0.00026 38.1 5.9 121 1-128 181-339 (419)
419 1icp_A OPR1, 12-oxophytodienoa 67.3 13 0.00043 35.9 7.4 122 1-134 178-324 (376)
420 1vhn_A Putative flavin oxidore 67.1 11 0.00037 35.1 6.8 68 58-127 122-203 (318)
421 3f6c_A Positive transcription 67.1 23 0.00077 26.8 7.7 78 48-126 11-93 (134)
422 2ioy_A Periplasmic sugar-bindi 67.0 18 0.00063 31.7 8.0 63 50-112 19-88 (283)
423 3l49_A ABC sugar (ribose) tran 67.0 12 0.00041 32.7 6.8 83 49-131 22-120 (291)
424 1rqb_A Transcarboxylase 5S sub 66.7 61 0.0021 32.8 12.6 39 201-249 178-216 (539)
425 3hbl_A Pyruvate carboxylase; T 66.6 32 0.0011 38.0 11.3 116 74-217 632-766 (1150)
426 3ksm_A ABC-type sugar transpor 66.6 26 0.00088 30.1 8.8 64 49-112 17-90 (276)
427 3m6m_D Sensory/regulatory prot 66.3 33 0.0011 26.7 8.7 79 47-126 23-109 (143)
428 2hqr_A Putative transcriptiona 66.3 29 0.00099 29.2 8.9 75 50-127 12-88 (223)
429 1xky_A Dihydrodipicolinate syn 66.0 38 0.0013 31.3 10.3 28 106-134 81-109 (301)
430 2qzj_A Two-component response 65.9 40 0.0014 25.9 9.0 77 49-126 15-94 (136)
431 2r14_A Morphinone reductase; H 65.9 15 0.00052 35.3 7.7 122 1-134 177-322 (377)
432 2v9d_A YAGE; dihydrodipicolini 65.3 47 0.0016 31.4 11.0 72 62-134 34-128 (343)
433 1xky_A Dihydrodipicolinate syn 65.2 85 0.0029 28.9 16.2 151 44-247 60-233 (301)
434 3b4u_A Dihydrodipicolinate syn 65.2 29 0.00098 32.0 9.2 59 75-134 30-100 (294)
435 1geq_A Tryptophan synthase alp 65.0 12 0.00042 33.0 6.4 80 46-127 117-211 (248)
436 3tn4_A Phosphotriesterase; lac 65.0 44 0.0015 31.9 10.8 110 52-195 113-263 (360)
437 3lye_A Oxaloacetate acetyl hyd 65.0 92 0.0032 29.2 14.1 69 52-131 14-83 (307)
438 2hmc_A AGR_L_411P, dihydrodipi 65.0 27 0.00094 33.1 9.2 59 75-134 53-120 (344)
439 1ydn_A Hydroxymethylglutaryl-C 64.9 27 0.00091 32.0 8.9 25 44-68 21-45 (295)
440 2fn9_A Ribose ABC transporter, 64.9 28 0.00096 30.4 8.8 64 49-112 19-89 (290)
441 2y88_A Phosphoribosyl isomeras 64.8 19 0.00066 31.4 7.7 55 72-127 152-213 (244)
442 1jbe_A Chemotaxis protein CHEY 64.8 41 0.0014 25.1 9.7 78 49-127 15-99 (128)
443 3daq_A DHDPS, dihydrodipicolin 64.8 20 0.00068 33.1 8.1 28 106-134 71-99 (292)
444 1nsj_A PRAI, phosphoribosyl an 64.7 7.8 0.00027 34.3 5.0 67 62-130 97-173 (205)
445 3cwo_X Beta/alpha-barrel prote 64.6 23 0.0008 29.8 8.0 134 51-213 44-198 (237)
446 2gwg_A 4-oxalomesaconate hydra 64.5 62 0.0021 29.7 11.5 68 49-116 91-182 (350)
447 3ngj_A Deoxyribose-phosphate a 64.2 23 0.00079 32.3 8.1 82 48-133 130-223 (239)
448 3qfe_A Putative dihydrodipicol 64.1 14 0.00048 34.7 6.9 29 105-134 79-108 (318)
449 3h5d_A DHDPS, dihydrodipicolin 64.0 23 0.00079 33.0 8.4 69 64-133 13-103 (311)
450 3k30_A Histamine dehydrogenase 64.0 64 0.0022 33.0 12.5 142 49-216 89-322 (690)
451 3eul_A Possible nitrate/nitrit 64.0 26 0.0009 27.3 7.7 84 122-248 50-134 (152)
452 2yxg_A DHDPS, dihydrodipicolin 64.0 34 0.0012 31.4 9.4 59 75-134 27-97 (289)
453 3dz1_A Dihydrodipicolinate syn 64.0 14 0.0005 34.4 7.0 87 98-194 66-168 (313)
454 2nx9_A Oxaloacetate decarboxyl 63.7 80 0.0028 31.3 12.7 38 201-248 161-198 (464)
455 3sgz_A Hydroxyacid oxidase 2; 63.6 32 0.0011 33.0 9.4 128 94-256 204-337 (352)
456 1qkk_A DCTD, C4-dicarboxylate 63.6 22 0.00075 27.9 7.2 77 49-126 14-94 (155)
457 1srr_A SPO0F, sporulation resp 63.5 26 0.00089 26.1 7.3 41 177-218 63-105 (124)
458 3cz5_A Two-component response 63.4 46 0.0016 25.9 9.1 78 48-126 15-98 (153)
459 2ojp_A DHDPS, dihydrodipicolin 63.3 90 0.0031 28.5 13.9 154 42-248 47-223 (292)
460 3nl6_A Thiamine biosynthetic b 63.0 27 0.00091 35.4 9.2 71 49-127 56-126 (540)
461 3s5o_A 4-hydroxy-2-oxoglutarat 62.9 18 0.00061 33.7 7.4 59 75-134 41-111 (307)
462 3gr4_A Pyruvate kinase isozyme 62.9 12 0.00042 38.1 6.6 87 47-134 266-376 (550)
463 1me8_A Inosine-5'-monophosphat 62.8 53 0.0018 32.6 11.3 118 73-213 245-376 (503)
464 2lpm_A Two-component response 62.7 21 0.00073 28.6 6.9 64 53-116 23-89 (123)
465 2yxg_A DHDPS, dihydrodipicolin 62.7 92 0.0031 28.4 17.9 151 44-247 48-220 (289)
466 3hv2_A Response regulator/HD d 62.7 47 0.0016 25.9 9.0 57 176-248 73-132 (153)
467 3bil_A Probable LACI-family tr 62.6 61 0.0021 29.5 11.0 85 49-134 83-185 (348)
468 3oa3_A Aldolase; structural ge 62.6 19 0.00066 33.7 7.5 83 48-134 161-258 (288)
469 1yad_A Regulatory protein TENI 62.5 20 0.00067 31.1 7.2 64 62-127 110-183 (221)
470 3brs_A Periplasmic binding pro 62.5 17 0.00058 31.7 6.8 64 49-112 24-96 (289)
471 3b8i_A PA4872 oxaloacetate dec 62.5 28 0.00096 32.4 8.6 83 51-134 10-112 (287)
472 4adt_A Pyridoxine biosynthetic 62.3 24 0.00081 33.0 8.1 74 53-127 114-229 (297)
473 3cnb_A DNA-binding response re 62.3 41 0.0014 25.5 8.4 42 176-218 69-114 (143)
474 3otr_A Enolase; structural gen 62.3 11 0.00039 37.5 6.1 35 46-80 281-316 (452)
475 3ceu_A Thiamine phosphate pyro 62.2 11 0.00039 32.7 5.6 63 61-126 87-162 (210)
476 3grc_A Sensor protein, kinase; 62.2 38 0.0013 25.8 8.2 74 47-121 15-94 (140)
477 1ps9_A 2,4-dienoyl-COA reducta 62.1 22 0.00074 36.3 8.5 52 75-127 234-300 (671)
478 1p6q_A CHEY2; chemotaxis, sign 62.1 46 0.0016 24.8 9.7 78 49-127 17-101 (129)
479 1jvn_A Glutamine, bifunctional 61.7 18 0.00063 36.5 7.8 135 50-213 315-521 (555)
480 3lot_A Uncharacterized protein 61.7 6.2 0.00021 37.5 4.0 53 187-249 24-78 (314)
481 2vc7_A Aryldialkylphosphatase; 61.7 70 0.0024 28.6 11.1 65 99-197 157-224 (314)
482 3i42_A Response regulator rece 61.7 21 0.00073 26.8 6.5 73 48-121 13-91 (127)
483 3aty_A Tcoye, prostaglandin F2 61.7 46 0.0016 31.9 10.3 121 1-134 186-330 (379)
484 3crn_A Response regulator rece 61.6 50 0.0017 25.0 9.8 77 49-126 14-94 (132)
485 1hg3_A Triosephosphate isomera 61.5 41 0.0014 30.1 9.3 82 46-146 101-186 (225)
486 1gox_A (S)-2-hydroxy-acid oxid 61.5 1.1E+02 0.0038 28.9 12.9 45 174-220 211-257 (370)
487 3hzh_A Chemotaxis response reg 61.5 32 0.0011 27.1 7.9 43 176-219 98-142 (157)
488 2p0o_A Hypothetical protein DU 61.3 55 0.0019 31.7 10.6 115 48-194 49-177 (372)
489 3o1i_D Periplasmic protein TOR 61.1 40 0.0014 29.4 9.1 63 49-112 22-93 (304)
490 3t05_A Pyruvate kinase, PK; te 61.1 18 0.00063 37.3 7.6 87 47-134 217-327 (606)
491 2qxy_A Response regulator; reg 61.0 25 0.00087 26.9 7.0 67 158-246 50-118 (142)
492 2r8w_A AGR_C_1641P; APC7498, d 60.9 38 0.0013 31.9 9.4 73 61-134 36-131 (332)
493 2vk2_A YTFQ, ABC transporter p 60.9 33 0.0011 30.4 8.6 63 50-112 20-89 (306)
494 3na8_A Putative dihydrodipicol 60.7 1.1E+02 0.0036 28.5 13.8 152 44-247 72-246 (315)
495 3snk_A Response regulator CHEY 60.5 7.4 0.00025 30.0 3.7 80 47-127 23-107 (135)
496 3lrk_A Alpha-galactosidase 1; 60.3 16 0.00055 36.6 6.9 64 50-113 95-185 (479)
497 3qze_A DHDPS, dihydrodipicolin 60.2 1.1E+02 0.0037 28.4 15.8 151 44-247 71-244 (314)
498 3e49_A Uncharacterized protein 60.2 4.8 0.00017 38.1 2.9 53 187-249 24-78 (311)
499 3fa4_A 2,3-dimethylmalate lyas 60.0 1.1E+02 0.0039 28.5 12.8 69 52-131 7-76 (302)
500 2wkj_A N-acetylneuraminate lya 60.0 1.1E+02 0.0036 28.2 14.8 151 44-247 59-232 (303)
No 1
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=100.00 E-value=9e-93 Score=697.23 Aligned_cols=303 Identities=32% Similarity=0.470 Sum_probs=286.9
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
+|||||||||+|+++++++..+ .+|+.++.|+.++++++++++|++|||++|+++|+++||.|+|||||.++||+|++
T Consensus 55 ~aGAdavKfQ~~k~~tl~s~~~--~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~ 132 (385)
T 1vli_A 55 EAGADAVKFQMFQADRMYQKDP--GLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQS 132 (385)
T ss_dssp HHTCSEEEECCBCGGGGTSCCC-----------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHT
T ss_pred HhCCCEEeeeeeccCcccCcch--hhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHh
Confidence 4899999999999999998877 56766555776778999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCce
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNL 159 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l 159 (335)
+++|+|||||++++|+|||+++|++||||||||||+ |++||+.|+++|.+ ||. ++
T Consensus 133 ~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~-----------------------~i 188 (385)
T 1vli_A 133 TSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGA-EISDVHEAWRTIRAEGNN-----------------------QI 188 (385)
T ss_dssp TCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHHHHHTTTCC-----------------------CE
T ss_pred cCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHHHHHHCCCC-----------------------cE
Confidence 999999999999999999999999999999999999 99999999999998 766 89
Q ss_pred EEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCC-hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHH
Q psy17999 160 SILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENG-VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPE 238 (335)
Q Consensus 160 ~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g-~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~e 238 (335)
+||||+|+||+|.+++||++|++||++||++|||||||+.| ..+++||||+||+||||||||||+++|+||.+||+|+|
T Consensus 189 iLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlGA~iIEkHftldra~~G~D~~~SL~P~e 268 (385)
T 1vli_A 189 AIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPDE 268 (385)
T ss_dssp EEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTTCSEEEEEBCSCTTSSCSSCTTSBCHHH
T ss_pred EEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcCCCEEEeCCCccccCCCCchhhhCCHHH
Confidence 99999999999999999999999999998999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-------------HHhCCCCccCCccccccccccceEEEEeecCCCCcccccCCcEEeeCCCC---CC
Q psy17999 239 LKALVTGIRDIE-------------QSLGSPTKRMQVSEAPCYAKLGKCIVSSCDIQAGTVLQEFHVCIKVAEPK---GI 302 (335)
Q Consensus 239 l~~lv~~ir~~~-------------~alG~~~k~~~~~E~~~~~~~rrsl~a~~di~~G~~l~~~dl~~kr~~~~---Gi 302 (335)
|++||+.+|.++ .+||++.|.+.++|+.++.++|||||+++||++|++||++||++||| +. ||
T Consensus 269 f~~lv~~ir~i~~~~~~~~~~~~~~~alG~~~k~~~~~E~~~~~~~rrSlva~~di~~Ge~it~~nl~~kRP-g~~~~Gi 347 (385)
T 1vli_A 269 LKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTTAIEGEIRNFAYRGIFTTAPIQKGEAFSEDNIAVLRP-GQKPQGL 347 (385)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCCHHHHCCSSCCCCTTTCSHHHHTSCEEEESSCBCTTCBCCTTTEEEECC-TTSCCCB
T ss_pred HHHHHHHHHHHHhhcccccccchHHHHhCcccCccCHHHHHHHhhheeEEEEccccCCCCEecHHHeeEEcC-CCCCCCC
Confidence 999999999999 99999999999999999999999999999999999999999999995 67 99
Q ss_pred CcchHHHHh-cchhhcccCCCCcccCCCC
Q psy17999 303 CGTRYASVM-GRKVNRDIRRDESIQDIDL 330 (335)
Q Consensus 303 ~p~~~~~vi-G~~~~~di~~~~~i~~~~l 330 (335)
+|.+|++|+ ||+++||+++|++|+|+||
T Consensus 348 ~p~~~~~vl~Gk~~~~di~~~~~i~~~~i 376 (385)
T 1vli_A 348 HPRFFELLTSGVRAVRDIPADTGIVWDDI 376 (385)
T ss_dssp CGGGHHHHHTTCBCSSCBCTTCBCCGGGT
T ss_pred CHHHHHHHhCCCEEccccCCCCccCHHHh
Confidence 999999999 9999999999999999998
No 2
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=100.00 E-value=3.3e-92 Score=686.80 Aligned_cols=303 Identities=28% Similarity=0.486 Sum_probs=289.3
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
+|||||||||+|+++++++..+ ..|+.++. +.++++++++++|++|||++|+++|+++||.|+|||||++++|++++
T Consensus 46 ~aGadavKfq~~k~~tl~s~~~--~~fq~~~~-~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~ 122 (349)
T 2wqp_A 46 NAGAEVVKHQTHIVEDEMSDEA--KQVIPGNA-DVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQR 122 (349)
T ss_dssp HHTCSEEEEEECCHHHHCCGGG--GGCCCTTC-SSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH
T ss_pred HhCCCEEeeeecccccccCcch--hccccCCC-CccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHh
Confidence 4799999999999999988877 45665443 55666999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceE
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLS 160 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ 160 (335)
+++|+|||||++++|+|||+++|++||||||||||+ |++||+.|+++|.++++ +++
T Consensus 123 ~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma-t~~Ei~~Ave~i~~~G~-----------------------~ii 178 (349)
T 2wqp_A 123 MDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN-SIESIKKSVEIIREAGV-----------------------PYA 178 (349)
T ss_dssp HTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHHHHHHHTC-----------------------CEE
T ss_pred cCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHHHHHHcCC-----------------------CEE
Confidence 999999999999999999999999999999999999 99999999999998433 799
Q ss_pred EeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHH
Q psy17999 161 ILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELK 240 (335)
Q Consensus 161 llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~ 240 (335)
||||+|+||+|.+++||++|++||++||++|||||||+.|..+++||||+||+||||||||||+++|+||.+||+|+||+
T Consensus 179 Llhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~ 258 (349)
T 2wqp_A 179 LLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFK 258 (349)
T ss_dssp EEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHH
T ss_pred EEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHH
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCccCCccccccccccceEEEEeecCCCCcccccCCcEEeeCCCCC-CCcchHHHHhcchhhccc
Q psy17999 241 ALVTGIRDIEQSLGSPTKRMQVSEAPCYAKLGKCIVSSCDIQAGTVLQEFHVCIKVAEPKG-ICGTRYASVMGRKVNRDI 319 (335)
Q Consensus 241 ~lv~~ir~~~~alG~~~k~~~~~E~~~~~~~rrsl~a~~di~~G~~l~~~dl~~kr~~~~G-i~p~~~~~viG~~~~~di 319 (335)
+||+.+|.++.++|++.|.+.++|+.++.++|||||+++||++|++||++||++||| +.| |+|.+|++|+||+++||+
T Consensus 259 ~lv~~ir~~~~alG~~~k~~~~~E~~~~~~~rrsl~a~~di~~Ge~~t~~nl~~kRP-g~G~i~p~~~~~vlGk~~~~di 337 (349)
T 2wqp_A 259 ELKQGAHALKLARGGKKDTIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRP-GNGDFSVNEYETLFGKVAACNI 337 (349)
T ss_dssp HHHHHHHHHHHHSSCCTTCCCGGGHHHHHHHSCEEEESSCBCTTCBCCTTTEEEESC-TTSSSBGGGGGGGTTCBBSSCB
T ss_pred HHHHHHHHHHHHhCCCCCCcCHHHHHHHhhheeEEEEccccCCCCEecHHHeeEEcC-CCCCcCHHHHHHhcCceecccc
Confidence 999999999999999999999999999999999999999999999999999999995 788 999999999999999999
Q ss_pred CCCCcccCCCCC
Q psy17999 320 RRDESIQDIDLD 331 (335)
Q Consensus 320 ~~~~~i~~~~l~ 331 (335)
++|++|+|+||+
T Consensus 338 ~~~~~i~~~~l~ 349 (349)
T 2wqp_A 338 RKGAQIKKTDIE 349 (349)
T ss_dssp CTTCBCCGGGBC
T ss_pred CCCCccCHHHcC
Confidence 999999999985
No 3
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=1.5e-89 Score=667.52 Aligned_cols=300 Identities=23% Similarity=0.337 Sum_probs=278.0
Q ss_pred CCCc-----EEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHH
Q psy17999 2 CGAD-----CVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFD 76 (335)
Q Consensus 2 aGaD-----aVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd 76 (335)
|||| |||||+|+++++++.+... . ...++++.+++++|++|||++|+++|++.||.|+|||||.+++|
T Consensus 33 aGad~~~d~avKfQt~~~d~l~~~~~~~-----~--~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~fD~~svd 105 (350)
T 3g8r_A 33 SCQGFDFDFGFKLQYRNLDTFIHSSFKG-----R--DDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFDEESVD 105 (350)
T ss_dssp HTTTCCSEEEEEEEECCHHHHBCGGGTT-----C--CSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECSHHHHH
T ss_pred hCCcccCCeeEEccccchhhhcChhccC-----c--cHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEeccCCHHHHH
Confidence 6887 9999999999998654211 1 12346677788999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCccccc
Q psy17999 77 FLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYH 156 (335)
Q Consensus 77 ~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~ 156 (335)
+++++|+|+|||||++++|+|||+++|++||||||||||+ |++||+.|+++|.++++
T Consensus 106 ~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms-tl~Ei~~Ave~i~~~g~---------------------- 162 (350)
T 3g8r_A 106 LIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA-RREDIDKVVSFMLHRGK---------------------- 162 (350)
T ss_dssp HHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC-CHHHHHHHHHHHHTTTC----------------------
T ss_pred HHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC-CHHHHHHHHHHHHHcCC----------------------
Confidence 9999999999999999999999999999999999999999 99999999999998434
Q ss_pred CceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCC
Q psy17999 157 SNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSL 234 (335)
Q Consensus 157 ~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl 234 (335)
+++||||+|+||+|.+++||++|++||++||++|||||||+.| ..+++||||+||+||||||||||. .|+||.+||
T Consensus 163 -~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~~~~~AAvAlGA~vIEkH~tldr~-~g~D~~~Sl 240 (350)
T 3g8r_A 163 -DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVAQGATVFEKHVGLPTD-QYGINNYSA 240 (350)
T ss_dssp -CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSCCHHHHHHHHTTCCEEEEEBCCCBT-TBCCCTTCB
T ss_pred -CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCccHHHHHHHHcCCCEEEEecCcccC-CCCcccccC
Confidence 7999999999999999999999999999999999999999986 567889999999999999999994 789999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCC-ccCCccccccccccceEEEEeecCCCCcccccCCcEEeeCCCC-CCCcchHHHHhc
Q psy17999 235 TPPELKALVTGIRDIEQSLGSPT-KRMQVSEAPCYAKLGKCIVSSCDIQAGTVLQEFHVCIKVAEPK-GICGTRYASVMG 312 (335)
Q Consensus 235 ~p~el~~lv~~ir~~~~alG~~~-k~~~~~E~~~~~~~rrsl~a~~di~~G~~l~~~dl~~kr~~~~-Gi~p~~~~~viG 312 (335)
+|+||++||+.+|.++.+||++. +.++++|+.++..+|||||+++||++|++||++||++|||++. ||+|.+|++|+|
T Consensus 241 ~P~ef~~lv~~ir~i~~alG~~~~~~~~~~E~~~~~~~rrSlva~~di~~Ge~lt~~nl~~kRPg~~ggi~p~~~~~vlG 320 (350)
T 3g8r_A 241 NPEQVRRWLAAAARALAMLGDGEDDAVSETEQASLRSLRRGVFATRPVAAGEALTADNVSFAFPPVEGQLTANEWSKYVR 320 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCTTCCCCCHHHHHHHHTTSCEEEESSCBCTTCBCBTTBEEEEBCCCTTBCBGGGCCSSCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHhccceEEEEccccCCCCCccHHHeeEecCCCCCCcCHhHHHHhcC
Confidence 99999999999999999999984 6799999999999999999999999999999999999997544 699999999999
Q ss_pred chhhcccCCCCcccCCCCCCC
Q psy17999 313 RKVNRDIRRDESIQDIDLDPV 333 (335)
Q Consensus 313 ~~~~~di~~~~~i~~~~l~~~ 333 (335)
|+++||+++|++|+|+||+.+
T Consensus 321 k~~~~di~~~~~i~~~~i~~~ 341 (350)
T 3g8r_A 321 YTAKTPIAADAPVMAADLEPV 341 (350)
T ss_dssp EEESSCBCTTCBCBGGGEEEC
T ss_pred hhcccccCCCCCcCHHHHhhh
Confidence 999999999999999999865
No 4
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=100.00 E-value=7.8e-51 Score=385.41 Aligned_cols=202 Identities=18% Similarity=0.311 Sum_probs=187.0
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
++|||++|||+|++++ ++++|. .+..++|++|+++|++.||+|+++|||+.+++++.+
T Consensus 63 ~~ga~~~k~~~~kprt------------s~~~f~----------g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~ 120 (276)
T 1vs1_A 63 EAGAHMLRGGAFKPRT------------SPYSFQ----------GLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSR 120 (276)
T ss_dssp HHTCSEEECBSSCCCS------------STTSCC----------CCTHHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHH
T ss_pred HhCCCEEEeEEEeCCC------------Chhhhc----------CCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHH
Confidence 3799999999998764 112232 235899999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCce
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNL 159 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l 159 (335)
+ +|++||||++++|++||+++|++||||+|||||++|++||+.|++++.. ||+ ++
T Consensus 121 ~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~-----------------------~i 176 (276)
T 1vs1_A 121 Y-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNW-----------------------QV 176 (276)
T ss_dssp H-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCC-----------------------CE
T ss_pred h-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCC-----------------------eE
Confidence 9 9999999999999999999999999999999997799999999999998 877 89
Q ss_pred EEee-ecCCCCC-CccCCCchHHHHHHHHCCCCCe-ecCCCCCC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCC
Q psy17999 160 SILH-CVSAYPT-PYHDINLNVIHTLRSRYPDIPI-GYSGHENG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSD 229 (335)
Q Consensus 160 ~llH-C~s~YP~-~~~~~nL~~i~~L~~~fp~~pV-G~SdHt~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~D 229 (335)
+|+| |+++||+ +.+++||++|+.||++| ++|| |||||+.| ..+++||+|+||+ +||+|||+||+++ |
T Consensus 177 ~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~--D 253 (276)
T 1vs1_A 177 VLVERGIRTFEPSTRFTLDVAAVAVLKEAT-HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALS--D 253 (276)
T ss_dssp EEEECCBCCSCCSSSSBCBHHHHHHHHHHB-SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSS--C
T ss_pred EEEeCCcCCCCCcCcchhCHHHHHHHHHHh-CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCC--c
Confidence 9999 9999997 88999999999999999 9999 89999999 7899999999999 9999999999998 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q psy17999 230 HASSLTPPELKALVTGIRDIEQ 251 (335)
Q Consensus 230 h~~Sl~p~el~~lv~~ir~~~~ 251 (335)
|.+||+|+||++||+.+|+++.
T Consensus 254 ~~~sl~p~~~~~lv~~i~~~~~ 275 (276)
T 1vs1_A 254 AKQQLTPGEFARLMGELRWHRL 275 (276)
T ss_dssp GGGCBCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 5
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=100.00 E-value=2.6e-50 Score=397.33 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=186.9
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
++|||+||||+|++++ ++++|. +|+.+++++|+++|++.||+|+|+|||+.+++++.+
T Consensus 167 ~aGa~~vk~q~fkprt------------s~~~f~----------gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~ 224 (385)
T 3nvt_A 167 AKGLKLIRGGAFKPRT------------SPYDFQ----------GLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALD 224 (385)
T ss_dssp HTTCCEEECBSSCCCS------------STTSCC----------CCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTT
T ss_pred HcCCCeEEcccccCCC------------ChHhhc----------CCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHh
Confidence 4899999999997642 222332 578899999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCce
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNL 159 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l 159 (335)
+ +|++||||++++|++||+++|++||||+|||||+.|++||..|++++.+ ||. ++
T Consensus 225 ~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~-----------------------~i 280 (385)
T 3nvt_A 225 Y-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNG-----------------------KI 280 (385)
T ss_dssp T-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCC-----------------------CE
T ss_pred h-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCC-----------------------eE
Confidence 9 9999999999999999999999999999999994499999999999998 877 89
Q ss_pred EEeee-cCCCCC-CccCCCchHHHHHHHHCCCCCeecCCCCCCh-------HHHHHHHHcCCc--EEEeccCCCCCCCCC
Q psy17999 160 SILHC-VSAYPT-PYHDINLNVIHTLRSRYPDIPIGYSGHENGV-------HVCYAAVAMGAQ--IIEKHFTLDKSWKGS 228 (335)
Q Consensus 160 ~llHC-~s~YP~-~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~-------~~~~aAvalGA~--vIEkH~tld~~~~G~ 228 (335)
+|+|| +|+||+ +.+++||++|+.||++| ++|| |||||-|. .+++||||+||+ |||||||||+++ +
T Consensus 281 ~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~-~lpV-~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~--~ 356 (385)
T 3nvt_A 281 ILCERGIRTYEKATRNTLDISAVPILKKET-HLPV-MVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVAL--S 356 (385)
T ss_dssp EEEECCBCCSCCSSSSBCCTTHHHHHHHHB-SSCE-EEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCS--S
T ss_pred EEEECCCCCCCCCCccccCHHHHHHHHHhc-CCCE-EEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcC--C
Confidence 99998 999999 78999999999999999 9999 99988653 689999999999 999999999999 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 229 DHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 229 Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
||++||+|++|++||+.+|.++.+++.
T Consensus 357 D~~~sl~p~el~~lv~~i~~i~~~~~~ 383 (385)
T 3nvt_A 357 DSAQQMDIPEFEEFWNAILASNLVPHK 383 (385)
T ss_dssp CTTTSBCHHHHHHHHHHHHHHTCCC--
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999987653
No 6
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=100.00 E-value=2.4e-49 Score=385.77 Aligned_cols=206 Identities=21% Similarity=0.354 Sum_probs=188.8
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
++|||++|||+|++++ ++++|. .+..++|++|+++|++.||+|+++|||+.+++++.+
T Consensus 131 ~aGa~~vr~q~fKprT------------s~~~f~----------glg~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~ 188 (350)
T 1vr6_A 131 ELGVKVLRGGAYKPRT------------SPYSFQ----------GLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAE 188 (350)
T ss_dssp HTTCCEEECBSCCCCC------------STTSCC----------CCTHHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred HcCCCeeeeeEEeCCC------------ChHhhc----------CCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHH
Confidence 4899999999998764 122232 245799999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCce
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNL 159 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l 159 (335)
+ +|++||||++++|++||+++|+++|||+|||||++|++||..|++++.+ ||+ ++
T Consensus 189 ~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~-----------------------~v 244 (350)
T 1vr6_A 189 Y-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNT-----------------------KI 244 (350)
T ss_dssp H-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCC-----------------------CE
T ss_pred h-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCC-----------------------eE
Confidence 9 9999999999999999999999999999999998899999999999998 887 55
Q ss_pred EEe-eecCCCCCC-ccCCCchHHHHHHHHCCCCCe-ecCCCCCC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCC
Q psy17999 160 SIL-HCVSAYPTP-YHDINLNVIHTLRSRYPDIPI-GYSGHENG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSD 229 (335)
Q Consensus 160 ~ll-HC~s~YP~~-~~~~nL~~i~~L~~~fp~~pV-G~SdHt~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~D 229 (335)
+|+ ||+++||++ .+++||++|+.||++| ++|| |||||+.| ..+++||+|+||+ +||+|||+||+|+ |
T Consensus 245 iLceRG~~typ~~~~~~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~--D 321 (350)
T 1vr6_A 245 ILCERGIRTFEKATRNTLDISAVPIIRKES-HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALS--D 321 (350)
T ss_dssp EEEECCBCCSCCSSSSBCCTTHHHHHHHHB-SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSS--C
T ss_pred EEEeCCCCCCCCcChhhhhHHHHHHHHHhh-CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCC--c
Confidence 554 466789987 6999999999999999 9999 88999999 8899999999999 9999999999998 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 230 HASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 230 h~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
|++||+|++|++||+.+|+++.++|+
T Consensus 322 ~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 322 GKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp GGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999996
No 7
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=100.00 E-value=3.7e-48 Score=364.60 Aligned_cols=205 Identities=17% Similarity=0.297 Sum_probs=183.9
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHh
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
++|||+||||+|++++ .+ ++|. .+..++|++|+++|++.||+|+++|||+.+++++.+
T Consensus 48 ~~Ga~~vk~~~fkprt--------s~----~~~~----------g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~ 105 (262)
T 1zco_A 48 EVGIKVLRGGAFKPRT--------SP----YSFQ----------GYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAK 105 (262)
T ss_dssp HTTCCEEECBSSCCCS--------ST----TSCC----------CCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHH
T ss_pred HcCCCEEEEEecccCC--------Cc----cccc----------CccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHh
Confidence 4899999999998742 12 2332 234899999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCce
Q psy17999 81 ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNL 159 (335)
Q Consensus 81 l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l 159 (335)
+ +|++||||++++|++||+++|+++|||+|||||++|++||..|++++.. ||+ +++||+||.+
T Consensus 106 ~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~--~i~L~~RG~~------------- 169 (262)
T 1zco_A 106 Y-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNE--NVILCERGIR------------- 169 (262)
T ss_dssp H-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCC--CEEEEECCBC-------------
T ss_pred h-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCC--eEEEEECCCC-------------
Confidence 9 9999999999999999999999999999999998899999999999998 887 4555555432
Q ss_pred EEeeecCCCCCCccCCCchHHHHHHHHCCCCCe-ecCCCCCCh-----HHHHHHHHcCCc--EEEeccCCCCCCCCCCCC
Q psy17999 160 SILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI-GYSGHENGV-----HVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHA 231 (335)
Q Consensus 160 ~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV-G~SdHt~g~-----~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~ 231 (335)
|+++| +.+++||++|+.|+++| ++|| |||||+.|. .++.+|+|+||+ +||+|||+||+++ ||+
T Consensus 170 ----~~~~y--~~~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~--D~~ 240 (262)
T 1zco_A 170 ----TFETA--TRFTLDISAVPVVKELS-HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALS--DSQ 240 (262)
T ss_dssp ----CSCCS--SSSBCCTTHHHHHHHHB-SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSS--CTT
T ss_pred ----CCCCc--ChhhcCHHHHHHHHhhh-CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCC--hhh
Confidence 77889 56889999999999999 9999 999999997 889999999999 9999999999999 999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy17999 232 SSLTPPELKALVTGIRDIEQS 252 (335)
Q Consensus 232 ~Sl~p~el~~lv~~ir~~~~a 252 (335)
+||+|+||++||+.+|+++.+
T Consensus 241 ~sl~p~~~~~l~~~i~~~~~~ 261 (262)
T 1zco_A 241 QQLTFDDFLQLLKELEALGWK 261 (262)
T ss_dssp TCBCHHHHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999988743
No 8
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=100.00 E-value=1.2e-46 Score=357.26 Aligned_cols=196 Identities=12% Similarity=0.179 Sum_probs=179.9
Q ss_pred CCCCCCCCCcccHHHHHHhhcCC-HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHH
Q psy17999 25 RPYLSPHAWANTYGQHKQHLEFS-QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAA 103 (335)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~el~-~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a 103 (335)
+|.+++++|.. +. .+.+++|+++|++.||+|+++|||+.+++++.++ +|++||+|++++|++||+++|
T Consensus 63 apRTs~~sf~G----------~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va 131 (285)
T 3sz8_A 63 ANRSSIHSYRG----------VGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIA 131 (285)
T ss_dssp TTCSSTTSCCC----------SCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHH
T ss_pred CCCCCCCCcCC----------cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECccccCCHHHHHHHH
Confidence 46666655432 56 6889999999999999999999999999999999 999999999999999999999
Q ss_pred hcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 104 SKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 104 ~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
+++|||+|||||++|++||..|++++.+ ||. +++|+||.++||.+...+||++|+.
T Consensus 132 ~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~-----------------------~i~L~erg~~y~~~~~~vdl~~i~~ 188 (285)
T 3sz8_A 132 KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGND-----------------------RVMLCERGSSFGYDNLVVDMLGFRQ 188 (285)
T ss_dssp HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCC-----------------------CEEEEECCEECSSSCEECCTTHHHH
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCC-----------------------cEEEEeCCCCCCCCcCccCHHHHHH
Confidence 9999999999996699999999999998 887 8999999999986666799999999
Q ss_pred HHHHCCCCCeec-CCCC-----------CC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHH
Q psy17999 183 LRSRYPDIPIGY-SGHE-----------NG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALV 243 (335)
Q Consensus 183 L~~~fp~~pVG~-SdHt-----------~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv 243 (335)
||++||++|||| |||+ .| ..+++||||+||+ +||||||+||+|+ ||++||+|+||++||
T Consensus 189 lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~--D~~~sl~p~el~~lv 266 (285)
T 3sz8_A 189 MAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARC--DGPSALPLHQLEGLL 266 (285)
T ss_dssp HHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSC--SSCCCEEGGGHHHHH
T ss_pred HHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCC--chhhccCHHHHHHHH
Confidence 999996699998 9999 47 7889999999999 9999999999998 999999999999999
Q ss_pred HHHHHHHHHhCCC
Q psy17999 244 TGIRDIEQSLGSP 256 (335)
Q Consensus 244 ~~ir~~~~alG~~ 256 (335)
+.+|+++.++|+.
T Consensus 267 ~~i~~i~~~lg~~ 279 (285)
T 3sz8_A 267 SQMKAIDDLVKRM 279 (285)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCc
Confidence 9999999999974
No 9
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=100.00 E-value=5.4e-47 Score=359.79 Aligned_cols=189 Identities=13% Similarity=0.162 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
++++++|+++|++.||+|+++|||+.+++++.++ +|++||||++++|++||+++|+++|||+|||||++|++||..|++
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~ 150 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVE 150 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHH
Confidence 7899999999999999999999999999999999 999999999999999999999999999999999779999999999
Q ss_pred HHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec-CCCC-------
Q psy17999 128 TVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY-SGHE------- 198 (335)
Q Consensus 128 ~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~-SdHt------- 198 (335)
++.. ||+ +++|+||.++||.+.+.+||++|+.||++||++|||| |||+
T Consensus 151 ~i~~~Gn~-----------------------~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~ 207 (280)
T 2qkf_A 151 KFHEAGNG-----------------------KLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAG 207 (280)
T ss_dssp HHHHTTCC-----------------------CEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC-----
T ss_pred HHHHcCCC-----------------------eEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCcc
Confidence 9998 887 8999999999976667799999999999998899999 8999
Q ss_pred ----CC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCccCCccc
Q psy17999 199 ----NG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGSPTKRMQVSE 264 (335)
Q Consensus 199 ----~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~~~k~~~~~E 264 (335)
.| ..+++||+|+||+ +||+|||+||+++ ||++||+|+||++||+.+|+++.++|+ +.+.+.|
T Consensus 208 ~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~--D~~~sl~p~~l~~lv~~i~~~~~~~g~--~~~~~~e 280 (280)
T 2qkf_A 208 SAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKC--DGPSALPLHLLEDFLIRIKALDDLIKS--QPILTIE 280 (280)
T ss_dssp -----CHHHHHHHHHHHHHTTCCSEEEEEC------------------CCHHHHHHHHHHHHHHHHHH--SCCC---
T ss_pred ccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCC--ccccCCCHHHHHHHHHHHHHHHHHhCC--CCCCCCC
Confidence 78 7889999999995 9999999999998 999999999999999999999999997 5555554
No 10
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=100.00 E-value=1.3e-46 Score=359.04 Aligned_cols=213 Identities=13% Similarity=0.158 Sum_probs=187.6
Q ss_pred CCCcEEEeecccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhC
Q psy17999 2 CGADCVKFQKSCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSA 81 (335)
Q Consensus 2 aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l 81 (335)
+|||++|||+|++. |.. +|.+++++| +.+.+ ++++++|+++|++.||+|+++|||+.+++++.+
T Consensus 44 ~ga~~~~~~v~k~~--f~k----~prts~~sf--------~g~~l-~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~- 107 (292)
T 1o60_A 44 VTEKLGVPYVFKAS--FDK----ANRSSIHSY--------RGPGM-EEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD- 107 (292)
T ss_dssp HHHHHTCCEEEEEE--SCC----TTCSSTTSC--------CCSCH-HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-
T ss_pred HhhhhCEeEEEhhh--ccc----CCCCChHHh--------hhhhH-HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-
Confidence 58899999998854 221 122222222 22223 789999999999999999999999999999999
Q ss_pred CCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceE
Q psy17999 82 NVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLS 160 (335)
Q Consensus 82 ~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ 160 (335)
.+|++||||++++|++||+++|+++|||+|||||++|++||..|++++.. ||+ +++
T Consensus 108 ~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~-----------------------~i~ 164 (292)
T 1o60_A 108 VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEECGND-----------------------KII 164 (292)
T ss_dssp TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHHTTCC-----------------------CEE
T ss_pred cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCC-----------------------eEE
Confidence 59999999999999999999999999999999997799999999999998 887 899
Q ss_pred EeeecCCCCCCccCCCchHHHHHHHHCCCCCeec-CCCC-----------CC-----hHHHHHHHHcCCc--EEEeccCC
Q psy17999 161 ILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY-SGHE-----------NG-----VHVCYAAVAMGAQ--IIEKHFTL 221 (335)
Q Consensus 161 llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~-SdHt-----------~g-----~~~~~aAvalGA~--vIEkH~tl 221 (335)
|+||.++||.+.+.+||+.|+.||++||++|||| |||+ .| ..+++||+|+||+ +||+|||+
T Consensus 165 L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~ 244 (292)
T 1o60_A 165 LCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNP 244 (292)
T ss_dssp EEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESSG
T ss_pred EEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCc
Confidence 9999999966656799999999999998899999 9999 67 6889999999999 99999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 222 DKSWKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 222 d~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
||+|+ ||.+||+|+||++||+.+|+++.++|+
T Consensus 245 d~al~--Dg~~sl~p~~l~~lv~~ir~i~~a~g~ 276 (292)
T 1o60_A 245 NQAKC--DGPSALPLSALEGFVSQMKAIDDLVKS 276 (292)
T ss_dssp GGCSS--CCTTCEEGGGHHHHHHHHHHHHHHHHH
T ss_pred ccCCc--hhhcCCCHHHHHHHHHHHHHHHHHhCC
Confidence 99998 999999999999999999999999996
No 11
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=100.00 E-value=2.1e-45 Score=350.32 Aligned_cols=181 Identities=13% Similarity=0.160 Sum_probs=169.5
Q ss_pred CC-HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHH
Q psy17999 46 FS-QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 46 l~-~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~ 124 (335)
+. .+.+++|+++|++.||+|+++|||+.+++++.++ +|++||||++++|++||+++|+++|||+|||||+.|++||+.
T Consensus 95 lg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ 173 (298)
T 3fs2_A 95 IGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKN 173 (298)
T ss_dssp CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHH
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHH
Confidence 56 6899999999999999999999999999999999 999999999999999999999999999999999669999999
Q ss_pred HHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec-CCCC----
Q psy17999 125 IYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY-SGHE---- 198 (335)
Q Consensus 125 Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~-SdHt---- 198 (335)
|++++.+ ||. +++|+||.++||.+...+||++|+.||+ | ++|||| |||+
T Consensus 174 ave~i~~~Gn~-----------------------~iiL~erg~~y~~~~~~vdl~~i~~lk~-~-~~PV~~D~sHsvq~p 228 (298)
T 3fs2_A 174 VLAKITESGNP-----------------------NVLATERGVSFGYNTLVSDMRALPIMAG-L-GAPVIFDATHSVQQP 228 (298)
T ss_dssp HHHHHHTTTCC-----------------------CEEEEECCEECSSSCEECCTTHHHHHHT-T-TSCEEEEHHHHTCCC
T ss_pred HHHHHHHcCCC-----------------------eEEEEECCCCCCCCCCccCHHHHHHHHH-c-CCcEEEcCCCccccC
Confidence 9999998 877 8999999999975555589999999998 9 999998 9999
Q ss_pred -------CC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Q psy17999 199 -------NG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLG 254 (335)
Q Consensus 199 -------~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG 254 (335)
.| ..+++||||+||+ +|||||||||+|+ ||++||+|+||++||+.+|+++.++.
T Consensus 229 ~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~--D~~~sl~p~el~~lv~~ir~i~~a~~ 296 (298)
T 3fs2_A 229 GGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPS--DGPNMVPIDKMPALLEKLMAFDRIAK 296 (298)
T ss_dssp C--------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSS--SGGGCEEGGGHHHHHHHHHHHHHHHT
T ss_pred CcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCC--chhhcCCHHHHHHHHHHHHHHHHHHh
Confidence 57 7889999999998 9999999999998 99999999999999999999999875
No 12
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=100.00 E-value=1.4e-45 Score=350.58 Aligned_cols=189 Identities=14% Similarity=0.206 Sum_probs=169.5
Q ss_pred CC-HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHH
Q psy17999 46 FS-QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 46 l~-~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~ 124 (335)
|. .+.+++|+++|++.||+|+++|||+.+++++.++ +|++||+|++++|++||+++|+++|||+|||||++|++||+.
T Consensus 71 lg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ 149 (288)
T 3tml_A 71 LGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV-VDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKN 149 (288)
T ss_dssp -CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHH
Confidence 56 6899999999999999999999999999999999 999999999999999999999999999999999669999999
Q ss_pred HHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec-CCCC----
Q psy17999 125 IYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY-SGHE---- 198 (335)
Q Consensus 125 Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~-SdHt---- 198 (335)
|++++.+ ||. +|. .+++++|+||.++||.....+||++|+.||+ | ++|||| |||+
T Consensus 150 ave~i~~~Gn~--------~~~---------~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~-~~pV~~D~sHs~q~p 210 (288)
T 3tml_A 150 VIDKARDAARE--------AGL---------SEDRFMACERGVSFGYNNLVSDMRSLAIMRE-T-NAPVVFDATHSVQLP 210 (288)
T ss_dssp HHHHHHHHHHT--------TTC---------CSCCEEEEECCEECSSSCEECCHHHHHHGGG-G-SSCEEEEHHHHTCCC
T ss_pred HHHHHHHcCCC--------ccC---------CCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-c-CCcEEEcCCcccccC
Confidence 9999998 871 000 0018999999999953323369999999998 9 999988 9999
Q ss_pred -------CC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC
Q psy17999 199 -------NG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGSP 256 (335)
Q Consensus 199 -------~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~~ 256 (335)
.| ..+++||||+||+ +||||||+||+|+ ||++||+|+||++||+.+|+++.++|+.
T Consensus 211 ~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~pd~al~--D~~~sl~p~el~~lv~~ir~i~~alg~~ 280 (288)
T 3tml_A 211 GGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNPAEAKS--DGPNAVPLNRMGALLETLVTLDQAVKRN 280 (288)
T ss_dssp C--------CTTHHHHHHHHHHHHCCSEEEEEEESSGGGCSS--CGGGCEEGGGHHHHHHHHHHHHHHHHSS
T ss_pred CcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccChhhcCC--chhhcCCHHHHHHHHHHHHHHHHHhCCC
Confidence 47 7889999999998 9999999999998 9999999999999999999999999954
No 13
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=100.00 E-value=6.6e-40 Score=309.17 Aligned_cols=197 Identities=14% Similarity=0.194 Sum_probs=172.3
Q ss_pred CCCCCCCCCcccHHHHHHhhcCC-HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHH
Q psy17999 25 RPYLSPHAWANTYGQHKQHLEFS-QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAA 103 (335)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~el~-~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a 103 (335)
+|.+++++|.. +. ++.+++|.++|++.||+|++++||+.+++++.++ +|++||||++++|++||+++|
T Consensus 47 apRTs~~sf~G----------~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~-vd~~~IgA~~~rn~~ll~~~a 115 (267)
T 2nwr_A 47 ANRSSIHSFRG----------HGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV-ADIIQIPAFLCRQTDLLLAAA 115 (267)
T ss_dssp TTCSSTTSCCC----------SCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHH
T ss_pred CCCCCCCCCcC----------ccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc-CCEEEECcccccCHHHHHHHH
Confidence 36777765532 45 5788999999999999999999999999999995 999999999999999999999
Q ss_pred hcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 104 SKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 104 ~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
++++||++||||+.|++||..|++++.. ||+ ++.|+||.+.|+-+.+.+||++|+.
T Consensus 116 ~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~-----------------------~i~L~~rG~~~~y~~~~~dl~~i~~ 172 (267)
T 2nwr_A 116 KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAK-----------------------EIYLTERGTTFGYNNLVVDFRSLPI 172 (267)
T ss_dssp TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCS-----------------------SEEEEECCEECSSSCEECCTTHHHH
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCC-----------------------eEEEEECCCCCCCCccccCHHHHHH
Confidence 9999999999995599999999999998 887 8888898888855556699999999
Q ss_pred HHHHCCCCCe------------ecCCCCCC-----hHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHH
Q psy17999 183 LRSRYPDIPI------------GYSGHENG-----VHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALV 243 (335)
Q Consensus 183 L~~~fp~~pV------------G~SdHt~g-----~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv 243 (335)
||+. + || ||||||.| ..++.||+|+||+ +||+|||+|++++ ||.+||+|++|++||
T Consensus 173 lk~~--~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~pd~al~--Dg~qsl~p~~l~~l~ 247 (267)
T 2nwr_A 173 MKQW--A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALS--DASTQLPLSQLEGII 247 (267)
T ss_dssp HTTT--S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCSS--CTTTCEEGGGHHHHH
T ss_pred HHHc--C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCCcccCCC--ccccCCCHHHHHHHH
Confidence 9985 4 77 99999999 7899999999995 9999999999998 999999999999999
Q ss_pred HHHHHHHHHhCCCCccC
Q psy17999 244 TGIRDIEQSLGSPTKRM 260 (335)
Q Consensus 244 ~~ir~~~~alG~~~k~~ 260 (335)
+.+|+++.++|++.+++
T Consensus 248 ~~i~~~~~~~g~~~~~~ 264 (267)
T 2nwr_A 248 EAILEIREVASKYYETI 264 (267)
T ss_dssp HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhCCccccC
Confidence 99999999999887764
No 14
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=8.3e-17 Score=125.52 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=61.4
Q ss_pred ccceEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCCC
Q psy17999 270 KLGKCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPVE 334 (335)
Q Consensus 270 ~~rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~~ 334 (335)
.+||||||++||++||+||++||+++|-|+.||+|.+|++++|+++++||.+|++|+|++|.+++
T Consensus 4 ~~rrslvA~rdI~~Gevit~~dl~~kR~pg~Gl~p~~~~~viGk~a~rdi~~g~~I~~~~l~~~~ 68 (79)
T 1wvo_A 4 GSSGSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTVEEDDTIMEELVDNHG 68 (79)
T ss_dssp CCCCEEEESSCBCTTCBCCGGGEEEETTCCCSSCSSSHHHHTTCBBSSCBCTTCBCCGGGBCCCC
T ss_pred cccEEEEEeCccCCCCCcCHHHeeEEecCCCCCCcccHHHHcChhhccccCCCCccCHHHHHHHh
Confidence 58999999999999999999999999845789999999999999999999999999999998765
No 15
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=99.57 E-value=1.9e-14 Score=139.69 Aligned_cols=146 Identities=14% Similarity=0.191 Sum_probs=125.9
Q ss_pred HHHHHHHHHH---HHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHH
Q psy17999 48 QEEYVMLQQC---ADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 48 ~e~~~~L~~~---~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~ 124 (335)
.+.++.+++. ..+.|+++.+++.|+.+++++.++ ++.++||++.+.|..+++.++.+++||.++.|..++++++..
T Consensus 120 ~~GL~ilr~ll~~~~e~GlPv~TEvld~~~~~~vad~-vd~~qIGAR~~esq~hr~~asg~~~PVg~Kngt~g~i~~~l~ 198 (350)
T 1n8f_A 120 NDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADL-MSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAID 198 (350)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCCSSTHHHHGGG-CSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeecCcccHHHHhhc-CcEEEECCccccCHHHHHHHhcCCCeEEEecCCCCCHHHHHH
Confidence 4678888888 999999999999999999999998 999999999999999999999999999999999889999999
Q ss_pred H------------------HHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHH-HHH
Q psy17999 125 I------------------YTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIH-TLR 184 (335)
Q Consensus 125 A------------------v~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~-~L~ 184 (335)
| ++++.. ||+ ++++|+||.++ | +| +..|++.+. .|+
T Consensus 199 Ai~aa~~~h~fl~~~~~G~~~~v~t~GN~--~~~lilRG~~~-~-----------------ny----~~~di~~~~~~l~ 254 (350)
T 1n8f_A 199 AINAAGAPHCFLSVTKWGHSAIVNTSGNG--DCHIILRGGKE-P-----------------NY----SAKHVAEVKEGLN 254 (350)
T ss_dssp HHHHHTSCCEEEEECTTSBEEEEEECCCS--CEEEEECCSSS-C-----------------CC----SHHHHHHHHHHHH
T ss_pred HHHHHhCCceeeeeCCCCcEEEEECCCCC--CEEEEECCCCC-C-----------------CC----CHHHHHHHHHHHH
Confidence 9 777777 888 89999999873 2 33 567899998 677
Q ss_pred HHCCCCC--e-ecCCCCCC-----------hHHHHHHHHcCC---c--EEEeccCC
Q psy17999 185 SRYPDIP--I-GYSGHENG-----------VHVCYAAVAMGA---Q--IIEKHFTL 221 (335)
Q Consensus 185 ~~fp~~p--V-G~SdHt~g-----------~~~~~aAvalGA---~--vIEkH~tl 221 (335)
+ . ++| | ...+|..+ ..++ ++++.|+ + +||-|...
T Consensus 255 ~-~-~lp~~VivD~SH~ns~k~~~~Q~~vv~~la-a~ia~G~~~i~GlmiEshl~d 307 (350)
T 1n8f_A 255 K-A-GLPAQVMIDFSHANSSKQFKKQMDVCADVC-QQIAGGEKAIIGVMVESHLVE 307 (350)
T ss_dssp H-T-TCCCCEEEECSGGGTTTCGGGHHHHHHHHH-HHHHTTCCSEEEEEEEBCSSS
T ss_pred H-c-CCCCeEEEECCCcccCccccccHHHHHHHH-HHHHcCCCcccEEEEEeccCC
Confidence 6 5 788 6 67899765 1244 8899999 5 99999553
No 16
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=99.42 E-value=2.4e-13 Score=132.58 Aligned_cols=162 Identities=13% Similarity=0.130 Sum_probs=121.3
Q ss_pred HHHHHHHHHHH---HHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHH
Q psy17999 48 QEEYVMLQQCA---DQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 48 ~e~~~~L~~~~---~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~ 124 (335)
.+.++.+++.. .+.|+++.+++.|+.+.+++.++ +....||++.+.|..+++.++.+++||.++.|..++++++..
T Consensus 135 ~~GL~i~r~ll~~v~e~GlPvaTEvld~~~~qyv~Dl-lsw~aIGARt~esq~hre~Asgl~~PVg~Kngt~g~i~~~~~ 213 (370)
T 1of8_A 135 NKGLQSARQLFVNLTNIGLPIGSEMLDTISPQYLADL-VSFGAIGARTTESQLHRELASGLSFPVGFKNGTDGTLNVAVD 213 (370)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEECCSSSTHHHHGGG-CSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCceEEeecCcccHHHHHHH-HhhccccCcccccHHHHHHHhcCCCeEEEcCCCCCCHHHHHH
Confidence 55666644444 79999999999999999998666 556689999999976666667899999999998889999999
Q ss_pred H------------------HHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH
Q psy17999 125 I------------------YTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS 185 (335)
Q Consensus 125 A------------------v~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~ 185 (335)
| ++++.. ||+ ++++|+||.++. -+| ..+.+++.. ..|++
T Consensus 214 Ai~aa~~~H~Fl~v~~~G~a~~v~t~GN~--~~~lilRG~~~~-----------------~nY--~~~~vd~~~-~~l~~ 271 (370)
T 1of8_A 214 ACQAAAHSHHFMGVTKHGVAAITTTKGNE--HCFVILRGGKKG-----------------TNY--DAKSVAEAK-AQLPA 271 (370)
T ss_dssp HHHHHTSCCEEEEECTTSBEEEEEECCCS--CEEEEECCCTTC-----------------CCC--SHHHHHHHH-HHCCT
T ss_pred HHHHHhCCceeeeeCCCCcEEEEEcCCCC--CEEEEECCCCCC-----------------CCC--CHHHHHHHH-HHHHH
Confidence 9 666776 888 899999998632 012 225677733 46766
Q ss_pred HCCCCCe-ecCCCCCC----------hHHHHHHHHcCCc-----EEEeccCCCCCCCCCCCCCCCCHHHHHHH
Q psy17999 186 RYPDIPI-GYSGHENG----------VHVCYAAVAMGAQ-----IIEKHFTLDKSWKGSDHASSLTPPELKAL 242 (335)
Q Consensus 186 ~fp~~pV-G~SdHt~g----------~~~~~aAvalGA~-----vIEkH~tld~~~~G~Dh~~Sl~p~el~~l 242 (335)
+ ++|| ...+|..| ...+.++++.|++ +||-|+. |..++++|++|..|
T Consensus 272 -~-~~pVivD~SHans~k~~~~Q~~V~~~~~a~ia~G~d~i~GlmiEsh~~--------dG~Q~l~~~~~~~L 334 (370)
T 1of8_A 272 -G-SNGLMIDYSHGNSNKDFRNQPKVNDVVCEQIANGENAITGVMIESNIN--------EGNQGIPAEGKAGL 334 (370)
T ss_dssp -T-CCCEEEESSGGGGTSCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSS--------SBBCCC-------C
T ss_pred -h-CCCEEEeCcccchhhhhhhhhHHHHHHHHHHHcCCCcceEEEEEecCC--------CCCCCCChhhhhhh
Confidence 5 7888 67899876 2256789999998 9999976 66677776666444
No 17
>1ucs_A Antifreeze peptide RD1; small beta barrel, pretzel fold, antifreeze protein; 0.62A {Lycodichthys dearborni} SCOP: b.85.1.1 PDB: 9ame_A 1ame_A 1kde_A 1kdf_A 1gzi_A 1hg7_A 1b7i_A 2spg_A 1jab_A 1b7j_A 2msj_A 1ekl_A 4ame_A 7ame_A 3qf6_A 2ame_A 1msj_A 1b7k_A 6ame_A 9msi_A ...
Probab=98.35 E-value=4.7e-07 Score=66.10 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=58.0
Q ss_pred ceEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCC
Q psy17999 272 GKCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPV 333 (335)
Q Consensus 272 rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~ 333 (335)
.+|++|+.-|+.|+.||..+++.|.-.+.||+++++.+++|+.++|.+..|+.|-.+.++.+
T Consensus 2 ~~SVVA~qlIPinTaLT~~Mm~~kV~~P~Gipaeei~~lVg~qvn~~V~~~~Tlmp~mvk~y 63 (64)
T 1ucs_A 2 KASVVANQLIPINTALTLIMMKAEVVTPMGIPAEEIPKLVGMQVNRAVPLGTTLMPDMVKNY 63 (64)
T ss_dssp CCEEEESSCBCTTCBCCGGGEEEECCSSCCSBGGGHHHHTTCBBSSCBCTTCBCCGGGBTTC
T ss_pred CcceeEEeeeccchhhhHHHHhceecCCCCCCHHHHHHHHHHHhhhcccCCCccCHHHHhcC
Confidence 36999999999999999999999987789999999999999999999999999998887765
No 18
>1ops_A Type III AFP, type III antifreeze protein; ICE crystal growth inhibition, pretzel fold, glycoprotein; 2.00A {Macrozoarces americanus} SCOP: b.85.1.1
Probab=98.33 E-value=4.5e-07 Score=66.18 Aligned_cols=62 Identities=19% Similarity=0.260 Sum_probs=58.4
Q ss_pred eEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCCC
Q psy17999 273 KCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPVE 334 (335)
Q Consensus 273 rsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~~ 334 (335)
+|++|++-|+.|+.||..+++.|.-.+.||+++++.+++|+.+++.+..|+.|-.+.++.+.
T Consensus 2 ~SVVA~qlIPinTaLT~~Mm~~kV~~P~Gip~edi~~lVg~qvn~~V~~g~Tlmpdmvk~y~ 63 (64)
T 1ops_A 2 QSVVATQLIPMNTALTPAMMEGKVTNPIGIPFAEMSQLVGKQVNTPVAKGQTLMPNMVKTYA 63 (64)
T ss_dssp CEEEESSCBCTTCBCCGGGEEEECCSSCCSBGGGGGGTTTCBBSSCBCTTCBCCGGGBTTTT
T ss_pred cceeeeeeeccchhhhHHHHHheecCCCCCCHHHHHHHHHHHHhhcccCCCccCHHHHhhcc
Confidence 69999999999999999999999877899999999999999999999999999998887764
No 19
>1msi_A Type III antifreeze protein isoform HPLC 12; multigene family, thermal hysteresis; 1.25A {Macrozoarces americanus} SCOP: b.85.1.1
Probab=98.29 E-value=7.7e-07 Score=66.02 Aligned_cols=63 Identities=17% Similarity=0.174 Sum_probs=58.3
Q ss_pred ceEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCCC
Q psy17999 272 GKCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPVE 334 (335)
Q Consensus 272 rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~~ 334 (335)
.+|++|+.-|+.|+.||..+++.+.-.+.||+++++.+++|+.++|.+..|+.|-.+.++.+.
T Consensus 3 q~SVVA~qlIPinTaLT~~Mm~~kV~~P~GiPaeei~~lVg~qVn~~V~~g~TlmP~mVK~y~ 65 (70)
T 1msi_A 3 QASVVANQLIPINTALTLVMMRSEVVTPVGIPAEDIPRLVSMQVNRAVPLGTTLMPDMVKGYA 65 (70)
T ss_dssp CCEEEESSCBCTTCBCCGGGEEEECCSSCCSBGGGHHHHTTCBBSSCBCTTCBCCGGGBTTCC
T ss_pred ccceeeEeeeccchhhhHHHHhceecCCCCCCHHHHHHHHHHHHhhcccCCCcccHHHHhhhc
Confidence 479999999999999999999999877899999999999999999999999999988877653
No 20
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=98.10 E-value=3.8e-06 Score=81.09 Aligned_cols=78 Identities=6% Similarity=0.053 Sum_probs=69.0
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTV 129 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i 129 (335)
.++|.....+.|+++.++..|+.+.+++.++ ++...||++.+.|..+++.++...+||.+++|+++|++++..|+..-
T Consensus 123 ~R~ll~~~~e~GLpiatE~ld~~~~qyv~dl-vs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gti~~ai~Ai~aa 200 (346)
T 3tqk_A 123 ARNLLSDLTNMGLPCATEFLDVITPQYFAEL-ITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSA 200 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCSSSGGGGTGGG-CSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCcCCHHHHHHH-hheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCchHHHhhHHHHH
Confidence 3444445789999999999999999999999 99999999999998776667789999999999999999999998754
No 21
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.44 E-value=0.00012 Score=70.64 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHcCCceEecc--CCh-----hh--------------HHHH--HhCCCCEEEEcCCCCCC----------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQ-----VS--------------FDFL--LSANVPFIKIGSGDSNN---------- 95 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~-----~s--------------vd~l--~~l~v~~~KIaS~d~~n---------- 95 (335)
+++.++.+.|++.|++|+..+ ++. .+ +... .++|+|++|+.-.--.+
T Consensus 147 ~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~ 226 (332)
T 3iv3_A 147 AYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEV 226 (332)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCC
T ss_pred HHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccc
Confidence 789999999999999999955 432 22 2334 46799999998543221
Q ss_pred ----HH----HHHHHHhcCCcEE-EeCCCCCCHHHHHHHHHHHHh-cC--CCCceeecccCCCCCCCCcccccCceEEee
Q psy17999 96 ----IP----LIKYAASKQKPLI-ISTGMLPSIEHVDNIYTTVKQ-YH--SNLSILHCVSAYPTPYPTVKQYHSNLSILH 163 (335)
Q Consensus 96 ----~~----LL~~~a~~gkPvi-lStG~~~tl~Ei~~Av~~i~~-g~--~~~~~~~c~~g~~~~~~~~~~~~~~l~llH 163 (335)
-. +=+.+..+..|+| ||-| . +.++..+.++.-.. |. . |+..| +=+.-|
T Consensus 227 ~y~~~ea~~~f~~~~~a~~~P~v~lsgG-~-~~~~fl~~v~~A~~aGa~f~---------Gv~~G---------Rnvwq~ 286 (332)
T 3iv3_A 227 VYSKEEAAQAFREQEASTDLPYIYLSAG-V-SAELFQETLVFAHKAGAKFN---------GVLCG---------RATWAG 286 (332)
T ss_dssp CBCHHHHHHHHHHHHHTCSSCEEEECTT-C-CHHHHHHHHHHHHHHTCCCC---------EEEEC---------HHHHTT
T ss_pred cccHHHHHHHHHHHHhcCCCCEEEECCC-C-CHHHHHHHHHHHHHcCCCcc---------eEEee---------HHHHHh
Confidence 12 3333456789977 5666 4 67888888866555 64 3 33322 445678
Q ss_pred ecCCCCCC
Q psy17999 164 CVSAYPTP 171 (335)
Q Consensus 164 C~s~YP~~ 171 (335)
|++.|+..
T Consensus 287 ~v~~~~~~ 294 (332)
T 3iv3_A 287 SVQVYMEE 294 (332)
T ss_dssp HHHHHHHH
T ss_pred hhhhhccc
Confidence 88888764
No 22
>3tee_A Flagella basal BODY P-ring formation protein FLGA; chaperone, flagellar P-ring formation, flagellar FLGI protei periplasmic protein; 1.95A {Salmonella typhimurium}
Probab=97.15 E-value=0.00012 Score=66.85 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=49.7
Q ss_pred cceEEEEeecCCCCcccccCCcEEeeCCCCCCC---cchHHHHhcchhhcccCCCCcccCCCCC
Q psy17999 271 LGKCIVSSCDIQAGTVLQEFHVCIKVAEPKGIC---GTRYASVMGRKVNRDIRRDESIQDIDLD 331 (335)
Q Consensus 271 ~rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~---p~~~~~viG~~~~~di~~~~~i~~~~l~ 331 (335)
...-++++++|++|++|+++||.+++.+-..++ ..+.++++|++++|+|.+|++|+.++|+
T Consensus 73 ~~~vvVa~r~i~rG~~I~~~Dl~~~~~~~~~l~~~~~~d~~~viG~~a~r~l~~Gq~i~~~~L~ 136 (219)
T 3tee_A 73 TGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIR 136 (219)
T ss_dssp EEEEEEECSCBCTTCBCCTTTEEEEEEEGGGSCTTBCCCGGGGTTEEESSCBCTTCBCBGGGEE
T ss_pred EEEEEEEccCcCCCCcCCHHHcEEEEEEhhhcCccccCCHHHhcCceEEcccCCCCccCHHHcc
Confidence 456789999999999999999999764322222 2366889999999999999999988875
No 23
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.07 E-value=0.0022 Score=60.04 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCC----CCHHHHHHHHhc---CCcEEEeCCCCCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDS----NNIPLIKYAASK---QKPLIISTGMLPS 118 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~----~n~~LL~~~a~~---gkPvilStG~~~t 118 (335)
|+.+++.+|.+.|+++|+.++.++.+.+.++.+.++|++++-|..+++ .++..++++.+. +.|||...|.+ |
T Consensus 146 l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~-t 224 (272)
T 3qja_A 146 LEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVR-G 224 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-S
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCC-C
Confidence 688999999999999999999999999999999999999999998774 356777787764 78999999999 9
Q ss_pred HHHHHHHHH
Q psy17999 119 IEHVDNIYT 127 (335)
Q Consensus 119 l~Ei~~Av~ 127 (335)
.+++..+.+
T Consensus 225 ~edv~~l~~ 233 (272)
T 3qja_A 225 TADLLAYAG 233 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 24
>3frn_A Flagellar protein FLGA; structural genomics, periplasmic, PSI-2, protein structure initiative; 2.05A {Thermotoga maritima}
Probab=96.89 E-value=0.00032 Score=66.06 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=50.0
Q ss_pred ceEEEEeecCCCCcccccCCcEEeeCCCCCCCc---chHHHHhcchhhcccCCCCcccCCCCC
Q psy17999 272 GKCIVSSCDIQAGTVLQEFHVCIKVAEPKGICG---TRYASVMGRKVNRDIRRDESIQDIDLD 331 (335)
Q Consensus 272 rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p---~~~~~viG~~~~~di~~~~~i~~~~l~ 331 (335)
+.-++|+++|.+|++|+++|+.+++.+-..++. .+.++++|+.++|+|.+|++|+.++|.
T Consensus 143 ~~VvVA~r~I~rGevIt~~Dl~l~~~dl~~l~~~~ltd~~~viG~~arR~L~aGqpI~~~~L~ 205 (278)
T 3frn_A 143 RNVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVK 205 (278)
T ss_dssp EEEEEESSCBCTTCBCCTTTEEEEEEEGGGCSSCBCSCHHHHTTCEESSCBCTTCBCBGGGEE
T ss_pred EEEEEECcEeCCCCCCCHHHeEEEEEEhhhcCccccCChHHhCCeEEEEEeCCCCeeCHHHcC
Confidence 467899999999999999999997644223322 456899999999999999999998886
No 25
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=96.75 E-value=0.07 Score=50.52 Aligned_cols=173 Identities=16% Similarity=0.142 Sum_probs=106.9
Q ss_pred HHHHHHHHHHH-HcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHH----------------hcCCcE
Q psy17999 49 EEYVMLQQCAD-QVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAA----------------SKQKPL 109 (335)
Q Consensus 49 e~~~~L~~~~~-~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a----------------~~gkPv 109 (335)
+++.++.+..+ +.|+.+..++ .+++.++.|.+.|++.+-+ +-+..|..+++.+. +.|.++
T Consensus 126 ~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~~~i~i-~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 204 (350)
T 3t7v_A 126 NRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLAL-YQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCV 204 (350)
T ss_dssp HHHHHHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTEEEEEC-CCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCCCEEEE-eeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeE
Confidence 45566666665 4577777666 6888899999999998886 56666666555543 345552
Q ss_pred EE--eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCC-CCc-------cCCCchH
Q psy17999 110 II--STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYP-TPY-------HDINLNV 179 (335)
Q Consensus 110 il--StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP-~~~-------~~~nL~~ 179 (335)
-. -.|..-|.+++.+.+++++.-+. +-+-++....+| ||. ..-.++.
T Consensus 205 ~~~~i~Glget~e~~~~~l~~l~~l~~-----------------------~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ 261 (350)
T 3t7v_A 205 EDGILTGVGNDIESTILSLRGMSTNDP-----------------------DMVRVMTFLPQEGTPLEGFRDKSNLSELKI 261 (350)
T ss_dssp EEEEEESSSCCHHHHHHHHHHHHHTCC-----------------------SEEEEEECCCCTTSTTTTCCCCCCCCHHHH
T ss_pred ccceEeecCCCHHHHHHHHHHHHhCCC-----------------------CEEEecceeeCCCCcCccCCCCChHHHHHH
Confidence 21 13433367777777776665211 222222232332 222 2234677
Q ss_pred HHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCC------CCCCHHHHHHHHHH
Q psy17999 180 IHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHA------SSLTPPELKALVTG 245 (335)
Q Consensus 180 i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~------~Sl~p~el~~lv~~ 245 (335)
+...|-.+|+..|=-|-+..|......|...||+++=-=++.+....|..+. ..++.+++.++++.
T Consensus 262 ia~~Rl~lp~~~I~a~~~~~g~~~~~~~l~~Gan~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~ 333 (350)
T 3t7v_A 262 ISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEI 333 (350)
T ss_dssp HHHHHHHSTTSBCEEEHHHHHHHHHHHHHHTTCCEEEEECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCcCccccccccChhHHHHHHhcCCceecCCCCCCCCCCCCCCCcccchhccCCHHHHHHHHHH
Confidence 7777888887655444455667778899999999777666666545555543 24677888777665
No 26
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.72 E-value=0.012 Score=51.76 Aligned_cols=125 Identities=11% Similarity=0.059 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHcCCceEe---ccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTA---SAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~s---tpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~A 125 (335)
+....+.+.++++++.++. ++.+.+.++.+.++|++++-+++ .+.++++.+.+.|.+++++ .. |.+|+..+
T Consensus 44 ~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~---~~~~~~~~~~~~g~~~~~g--~~-t~~e~~~a 117 (212)
T 2v82_A 44 QWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN---IHSEVIRRAVGYGMTVCPG--CA-TATEAFTA 117 (212)
T ss_dssp THHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS---CCHHHHHHHHHTTCEEECE--EC-SHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEEee--cC-CHHHHHHH
Confidence 4467778888888987765 56788899999999999997655 5688998888889998877 46 89988766
Q ss_pred HHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC-CCCeec-CCCCCChHH
Q psy17999 126 YTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP-DIPIGY-SGHENGVHV 203 (335)
Q Consensus 126 v~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp-~~pVG~-SdHt~g~~~ 203 (335)
.+ .| . +++++ ||+. ...+..+..+++.+| ++||-- ++=+. .-
T Consensus 118 ~~---~G-~-----------------------d~v~v-----~~t~--~~g~~~~~~l~~~~~~~ipvia~GGI~~--~~ 161 (212)
T 2v82_A 118 LE---AG-A-----------------------QALKI-----FPSS--AFGPQYIKALKAVLPSDIAVFAVGGVTP--EN 161 (212)
T ss_dssp HH---TT-C-----------------------SEEEE-----TTHH--HHCHHHHHHHHTTSCTTCEEEEESSCCT--TT
T ss_pred HH---CC-C-----------------------CEEEE-----ecCC--CCCHHHHHHHHHhccCCCeEEEeCCCCH--HH
Confidence 43 23 2 44443 5653 246788888888885 588733 33332 22
Q ss_pred HHHHHHcCCcEE
Q psy17999 204 CYAAVAMGAQII 215 (335)
Q Consensus 204 ~~aAvalGA~vI 215 (335)
...+...||+.+
T Consensus 162 i~~~~~~Ga~gv 173 (212)
T 2v82_A 162 LAQWIDAGCAGA 173 (212)
T ss_dssp HHHHHHHTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 233455788833
No 27
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.69 E-value=0.0068 Score=55.17 Aligned_cols=80 Identities=8% Similarity=-0.056 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC--------CCCCHHHHHHHHhcCCcEEEeCCCCCC
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG--------DSNNIPLIKYAASKQKPLIISTGMLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~--------d~~n~~LL~~~a~~gkPvilStG~~~t 118 (335)
+.+.+.++.+.+++.|+.++.++.+.+.+..+.+.|+|++-+.-. .-.++.+++++.+.+.|||-+-|.+ |
T Consensus 114 ~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~-t 192 (229)
T 3q58_A 114 RPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYN-T 192 (229)
T ss_dssp CSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCC-S
T ss_pred ChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCC-C
Confidence 457889999999999999999999999999999999999965321 3468899999988799999999999 9
Q ss_pred HHHHHHHHH
Q psy17999 119 IEHVDNIYT 127 (335)
Q Consensus 119 l~Ei~~Av~ 127 (335)
.+++.++.+
T Consensus 193 ~~d~~~~~~ 201 (229)
T 3q58_A 193 PALAANAIE 201 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988765
No 28
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.67 E-value=0.0074 Score=54.99 Aligned_cols=80 Identities=10% Similarity=-0.038 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--------CCCCCHHHHHHHHhcCCcEEEeCCCCCC
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--------GDSNNIPLIKYAASKQKPLIISTGMLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--------~d~~n~~LL~~~a~~gkPvilStG~~~t 118 (335)
+.+.+.++.+.+++.|+.++.++.+.+.+..+.+.|+|++-+.- ..-.++.+++++.+.+.|||-+-|.+ |
T Consensus 114 ~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~-t 192 (232)
T 3igs_A 114 RPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYN-S 192 (232)
T ss_dssp CSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCC-S
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCC-C
Confidence 35788999999999999999999999999999999999996421 13468999999988799999999999 9
Q ss_pred HHHHHHHHH
Q psy17999 119 IEHVDNIYT 127 (335)
Q Consensus 119 l~Ei~~Av~ 127 (335)
.+++.++.+
T Consensus 193 ~~d~~~~~~ 201 (232)
T 3igs_A 193 PALAAEAIR 201 (232)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998755
No 29
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.57 E-value=0.065 Score=51.53 Aligned_cols=135 Identities=17% Similarity=0.126 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHcCCceEeccC-----ChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM-----DQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf-----d~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
++...|...|+++|+.+..-.+ -.+.++.+.+.+++++.+.-+.. ...+++++.+.|+||+.+. . |.++..
T Consensus 84 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~-~~~~i~~~~~~g~~v~~~v--~-t~~~a~ 159 (369)
T 3bw2_A 84 VYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP-DREVIARLRRAGTLTLVTA--T-TPEEAR 159 (369)
T ss_dssp HHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC-CHHHHHHHHHTTCEEEEEE--S-SHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC-cHHHHHHHHHCCCeEEEEC--C-CHHHHH
Confidence 4566778889999998754332 15568888999999999987654 5789999988899999876 4 777766
Q ss_pred HHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC--CC-CC--C---ccC--CC-chHHHHHHHHCCCCCe
Q psy17999 124 NIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS--AY-PT--P---YHD--IN-LNVIHTLRSRYPDIPI 192 (335)
Q Consensus 124 ~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s--~Y-P~--~---~~~--~n-L~~i~~L~~~fp~~pV 192 (335)
.+.+ .| . +.+++++.. .| .+ + +.. .+ +..+..+++.+ ++||
T Consensus 160 ~a~~---~G-a-----------------------D~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPV 211 (369)
T 3bw2_A 160 AVEA---AG-A-----------------------DAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPV 211 (369)
T ss_dssp HHHH---TT-C-----------------------SEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCE
T ss_pred HHHH---cC-C-----------------------CEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-CceE
Confidence 5543 23 2 333443211 01 00 0 001 23 77788888888 8999
Q ss_pred ecCCCCCChHHHHHHHHcCCcEE
Q psy17999 193 GYSGHENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 193 G~SdHt~g~~~~~aAvalGA~vI 215 (335)
.-.+=-....-...++++||+.+
T Consensus 212 iaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 212 VAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEE
T ss_pred EEECCCCCHHHHHHHHHcCCCEE
Confidence 65554434555667888999844
No 30
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.46 E-value=0.012 Score=55.87 Aligned_cols=91 Identities=10% Similarity=0.035 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHcCCceEeccC----------Ch-----hhHHHHHhCCCCEEEEcCC-CC-CCHHHH-HHHHh----cC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM----------DQ-----VSFDFLLSANVPFIKIGSG-DS-NNIPLI-KYAAS----KQ 106 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf----------d~-----~svd~l~~l~v~~~KIaS~-d~-~n~~LL-~~~a~----~g 106 (335)
+...++.+.|+++|++|+..++ ++ .++..+.++|+|++|+... +- .++.-+ +.+.. ++
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~ 221 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN 221 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC
Confidence 6788999999999999998875 11 1356667799999999984 11 144444 33444 68
Q ss_pred Cc-EEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccC
Q psy17999 107 KP-LIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSA 144 (335)
Q Consensus 107 kP-vilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g 144 (335)
.| |+++=|. +.+++.+.+..... |. .-+.|-|.
T Consensus 222 ~P~Vv~aGG~--~~~~~~~~~~~a~~aGa---~Gv~vGRa 256 (304)
T 1to3_A 222 MPWVILSSGV--DEKLFPRAVRVAMEAGA---SGFLAGRA 256 (304)
T ss_dssp SCEEECCTTS--CTTTHHHHHHHHHHTTC---CEEEESHH
T ss_pred CCeEEEecCC--CHHHHHHHHHHHHHcCC---eEEEEehH
Confidence 99 6666665 55555554444444 43 34444443
No 31
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.41 E-value=0.045 Score=54.79 Aligned_cols=152 Identities=13% Similarity=0.141 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC----CHHHHHHHHhc---CCcEEEeCCCCCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN----NIPLIKYAASK---QKPLIISTGMLPS 118 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~----n~~LL~~~a~~---gkPvilStG~~~t 118 (335)
|+.+++.+|.++|+++|+.++..+.+++.++.+.++|.+++=|-.+++. ++...++++.. +.++|-..|.+ |
T Consensus 141 l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~-t 219 (452)
T 1pii_A 141 LDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN-T 219 (452)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCC-C
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCC-C
Confidence 7889999999999999999999999999999999999999999887765 34445554442 67888889999 9
Q ss_pred HHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCe-ecCCC
Q psy17999 119 IEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI-GYSGH 197 (335)
Q Consensus 119 l~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV-G~SdH 197 (335)
.+++..+.+. - +-+|+-+++-. ..++ -..+..|.. +.+.| |..+
T Consensus 220 ~edv~~~~~~-a------~avLVGealmr------------------------~~d~-~~~~~~l~~--~~~KICGit~- 264 (452)
T 1pii_A 220 YAQVRELSHF-A------NGFLIGSALMA------------------------HDDL-HAAVRRVLL--GENKVCGLTR- 264 (452)
T ss_dssp HHHHHHHTTT-C------SEEEECHHHHT------------------------CSCH-HHHHHHHHH--CSCEECCCCS-
T ss_pred HHHHHHHHHh-C------CEEEEcHHHcC------------------------CcCH-HHHHHHHHH--HhccccCCCc-
Confidence 9999987654 2 11222222110 0111 123445543 24566 5433
Q ss_pred CCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHH
Q psy17999 198 ENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALV 243 (335)
Q Consensus 198 t~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv 243 (335)
..-+.+|+.+||+.|=.-|... .+--++|++.++++
T Consensus 265 ---~eda~~a~~~Gad~iGfIf~~~-------SpR~V~~~~a~~i~ 300 (452)
T 1pii_A 265 ---GQDAKAAYDAGAIYGGLIFVAT-------SPRCVNVEQAQEVM 300 (452)
T ss_dssp ---HHHHHHHHHHTCSEEEEECCTT-------CTTBCCHHHHHHHH
T ss_pred ---HHHHHHHHhcCCCEEEeecCCC-------CCCCCCHHHHHHHH
Confidence 6677899999999666445332 12237788888884
No 32
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.10 E-value=0.027 Score=52.76 Aligned_cols=82 Identities=11% Similarity=0.141 Sum_probs=69.9
Q ss_pred cCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC----CHHHHHHHHhc---CCcEEEeCCCCC
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN----NIPLIKYAASK---QKPLIISTGMLP 117 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~----n~~LL~~~a~~---gkPvilStG~~~ 117 (335)
-|+.+++.+|.++|+++|+.++.++.+.+.++.+.++|+++|=|..+++. ++.....+++. +.|+|-..|.+
T Consensus 152 ~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~- 230 (272)
T 3tsm_A 152 SVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIF- 230 (272)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCC-
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCC-
Confidence 37889999999999999999999999999999999999999999887755 34555555542 68999999999
Q ss_pred CHHHHHHHHH
Q psy17999 118 SIEHVDNIYT 127 (335)
Q Consensus 118 tl~Ei~~Av~ 127 (335)
|.+++..+.+
T Consensus 231 t~edv~~l~~ 240 (272)
T 3tsm_A 231 THEDCLRLEK 240 (272)
T ss_dssp SHHHHHHHHT
T ss_pred CHHHHHHHHH
Confidence 9999987643
No 33
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.04 E-value=0.17 Score=47.50 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHc----CCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEe--CCCCCC---
Q psy17999 48 QEEYVMLQQCADQV----DIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIS--TGMLPS--- 118 (335)
Q Consensus 48 ~e~~~~L~~~~~~~----Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilS--tG~~~t--- 118 (335)
.|++..+....+.. ++.+...-++.+.++...+.|++++==-|+. +...+++-++++|.|+++. .|..-|
T Consensus 72 ~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~ 150 (282)
T 1aj0_A 72 EEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQE 150 (282)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSC
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccc
Confidence 56665555554443 9999999999999999999999999888877 7778999999999999995 344313
Q ss_pred -----------HHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH-
Q psy17999 119 -----------IEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS- 185 (335)
Q Consensus 119 -----------l~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~- 185 (335)
++...+.++.+.+ |-.. +=|+-+-|+- + .....-|+..|..|++
T Consensus 151 ~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~-~~IilDPg~g---------------------f-~k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 151 APKYDDVFAEVNRYFIEQIARCEQAGIAK-EKLLLDPGFG---------------------F-GKNLSHNYSLLARLAEF 207 (282)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHTTCCG-GGEEEECCTT---------------------S-SCCHHHHHHHHHTGGGG
T ss_pred cCccchHHHHHHHHHHHHHHHHHHcCCCh-hhEEEeCCCC---------------------c-ccCHHHHHHHHHHHHHH
Confidence 5666666666665 4221 1122222332 2 2222345555555442
Q ss_pred -HCCCCCe--ecC---------CCCC-----C-hHHHHHHHHcCCcEEEec
Q psy17999 186 -RYPDIPI--GYS---------GHEN-----G-VHVCYAAVAMGAQIIEKH 218 (335)
Q Consensus 186 -~fp~~pV--G~S---------dHt~-----g-~~~~~aAvalGA~vIEkH 218 (335)
.+ ++|+ |.| +-.. + ..+...|+.+||.+|=-|
T Consensus 208 ~~~-g~P~l~G~Srksfig~~~g~~~~~rl~~t~a~~~~a~~~ga~Ivrvh 257 (282)
T 1aj0_A 208 HHF-NLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVH 257 (282)
T ss_dssp GGG-CSCBEECCTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred hcC-CCCEEEEECccHhHHhhcCCCHHHHHHHHHHHHHHHHHCCCeEEEeC
Confidence 13 7776 766 3211 1 244556788999999877
No 34
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.97 E-value=0.11 Score=48.05 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHcCCceEeccCC----------hhh----HHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCC-cEEEe
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD----------QVS----FDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQK-PLIIS 112 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd----------~~s----vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gk-PvilS 112 (335)
++..++.+.|+++|+.++...+- .+. +....++|+|++|++.. .+...++.+.+ .++ ||+.|
T Consensus 125 ~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~--~~~e~~~~~~~~~~~~pV~as 202 (263)
T 1w8s_A 125 EELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT--GDPKTFSWAVKVAGKVPVLMS 202 (263)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC--SSHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC--CCHHHHHHHHHhCCCCeEEEE
Confidence 67899999999999999988764 222 34556789999999953 37788888775 477 99998
Q ss_pred CCCCC-CHHHHHHHHHHHHh-cC
Q psy17999 113 TGMLP-SIEHVDNIYTTVKQ-YH 133 (335)
Q Consensus 113 tG~~~-tl~Ei~~Av~~i~~-g~ 133 (335)
=|... |.++..+-+..... |.
T Consensus 203 GGi~~~~~~~~l~~i~~~~~aGA 225 (263)
T 1w8s_A 203 GGPKTKTEEDFLKQVEGVLEAGA 225 (263)
T ss_dssp CCSCCSSHHHHHHHHHHHHHTTC
T ss_pred eCCCCCCHHHHHHHHHHHHHcCC
Confidence 88664 67777765554444 53
No 35
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.88 E-value=0.36 Score=45.65 Aligned_cols=146 Identities=15% Similarity=0.182 Sum_probs=92.1
Q ss_pred HHHHHHHH---HHHH-HcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC--CCCCC---
Q psy17999 48 QEEYVMLQ---QCAD-QVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST--GMLPS--- 118 (335)
Q Consensus 48 ~e~~~~L~---~~~~-~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt--G~~~t--- 118 (335)
+|++.++. +..+ ..++.+...-++.+.++...+.|.++|==-|+......+++-+++.|.|+|+.. |.. .
T Consensus 97 ~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p-~y~d 175 (297)
T 1tx2_A 97 EEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM-NYRN 175 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCC-CCSS
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCC-Ccch
Confidence 56666555 3333 459999999999999999999999999777776557789999999999999975 544 4
Q ss_pred -----HHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH--HCCCC
Q psy17999 119 -----IEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS--RYPDI 190 (335)
Q Consensus 119 -----l~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~--~fp~~ 190 (335)
++.+.+.++.+.+ |-+. +=|+-+-|+- + .....-|+..|..++. .+ ++
T Consensus 176 ~v~ev~~~l~~~i~~a~~~GI~~-~~IilDPg~G---------------------f-gk~~~~n~~ll~~l~~l~~l-g~ 231 (297)
T 1tx2_A 176 LMADMIADLYDSIKIAKDAGVRD-ENIILDPGIG---------------------F-AKTPEQNLEAMRNLEQLNVL-GY 231 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCG-GGEEEECCTT---------------------S-SCCHHHHHHHHHTGGGGGGG-CS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCh-hcEEEeCCCC---------------------c-CCCHHHHHHHHHHHHHHHhC-CC
Confidence 3444445555554 3221 1122222332 2 1222345555554432 24 77
Q ss_pred Ce--ecC---------CCCC-----C-hHHHHHHHHcCCcEEEec
Q psy17999 191 PI--GYS---------GHEN-----G-VHVCYAAVAMGAQIIEKH 218 (335)
Q Consensus 191 pV--G~S---------dHt~-----g-~~~~~aAvalGA~vIEkH 218 (335)
|+ |.| +-.. + ..+...|+.+||.+|=-|
T Consensus 232 Pvl~G~Srksfig~~~g~~~~~r~~~t~a~~~~a~~~ga~Ivrvh 276 (297)
T 1tx2_A 232 PVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVH 276 (297)
T ss_dssp CBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred CEEEEeccchhhhhhcCCCHHHhHHHHHHHHHHHHHCCCcEEEeC
Confidence 76 666 3111 1 234566889999999876
No 36
>1c89_A RD3, antifreeze protein type III; thermal hysteresis protein, ICE binding protein; NMR {Pachycara brachycephalum} SCOP: b.85.1.1 b.85.1.1 PDB: 1c8a_A 3nla_A 3rdn_A
Probab=95.77 E-value=0.013 Score=47.96 Aligned_cols=63 Identities=24% Similarity=0.270 Sum_probs=57.8
Q ss_pred ceEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCCC
Q psy17999 272 GKCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPVE 334 (335)
Q Consensus 272 rrsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~~ 334 (335)
..|++|++-|+-.+-||.-+...+.-.+.||+.+++.+++|+.++|.+..|+.|-.+.++.++
T Consensus 72 q~SVVA~qLIPiNtALT~~Mm~~~vv~P~GIP~~ei~~~vg~QVNraV~~g~TlmP~MVK~Y~ 134 (134)
T 1c89_A 72 LKSVVANQLIPINTALTLVMMKAEEVSPKGIPSEEISKLVGMQVNRAVYLDQTLMPDMVKNYE 134 (134)
T ss_dssp SEEEEESSCBCSSCCBCTTTCEEEECSSCCCBSSSHHHHTTBCCSSCBCSSEECCTTTSCCCC
T ss_pred chheeeeeeecchhhhHHHHHhceecCCCCCCHHHHHHHHHHhhccccccCceechhhhccCC
Confidence 359999999999999999999988766789999999999999999999999999998887653
No 37
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=95.70 E-value=0.052 Score=51.40 Aligned_cols=75 Identities=13% Similarity=0.055 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHcCCceEeccC-------Chh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHH-hcCCcEEEeCCCC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM-------DQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAA-SKQKPLIISTGML 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf-------d~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a-~~gkPvilStG~~ 116 (335)
+++.++.+.|+++|+.++..+. |++ ++....++|+|++|..... +.++++. ..+.||+++=|..
T Consensus 158 ~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~----e~~~~vv~~~~vPVv~~GG~~ 233 (295)
T 3glc_A 158 KNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE----KGFERIVAGCPVPIVIAGGKK 233 (295)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT----TTHHHHHHTCSSCEEEECCSC
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH----HHHHHHHHhCCCcEEEEECCC
Confidence 6789999999999999998443 433 3456668999999999652 3456655 4689999988866
Q ss_pred CCHHHHHHHHH
Q psy17999 117 PSIEHVDNIYT 127 (335)
Q Consensus 117 ~tl~Ei~~Av~ 127 (335)
.+.+|..+.+.
T Consensus 234 ~~~~~~l~~v~ 244 (295)
T 3glc_A 234 LPEREALEMCW 244 (295)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 45666666553
No 38
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.69 E-value=0.28 Score=46.20 Aligned_cols=134 Identities=14% Similarity=0.054 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHH-----cCCceEec-----cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC
Q psy17999 48 QEEYVMLQQCADQ-----VDIMFTAS-----AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP 117 (335)
Q Consensus 48 ~e~~~~L~~~~~~-----~Gi~f~st-----pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~ 117 (335)
.+++.+..+..++ .|+.++.. +...+.++.+.+.+++++.++-++ ...+++++.+.|.||+.+. .
T Consensus 52 ~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~--p~~~~~~l~~~gi~vi~~v--~- 126 (328)
T 2gjl_A 52 PEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND--PGEHIAEFRRHGVKVIHKC--T- 126 (328)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC--CHHHHHHHHHTTCEEEEEE--S-
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC--cHHHHHHHHHcCCCEEeeC--C-
Confidence 5555444443332 35555654 222467888889999999998764 3788899988899999775 4
Q ss_pred CHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCC--CCCCccCCCchHHHHHHHHCCCCCeecC
Q psy17999 118 SIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA--YPTPYHDINLNVIHTLRSRYPDIPIGYS 195 (335)
Q Consensus 118 tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~--YP~~~~~~nL~~i~~L~~~fp~~pVG~S 195 (335)
+.++...+.+ .| . +..++++... +.-.....++..++.+++.. ++||.-+
T Consensus 127 t~~~a~~~~~---~G-a-----------------------D~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~-~iPviaa 178 (328)
T 2gjl_A 127 AVRHALKAER---LG-V-----------------------DAVSIDGFECAGHPGEDDIPGLVLLPAAANRL-RVPIIAS 178 (328)
T ss_dssp SHHHHHHHHH---TT-C-----------------------SEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC-CSCEEEE
T ss_pred CHHHHHHHHH---cC-C-----------------------CEEEEECCCCCcCCCCccccHHHHHHHHHHhc-CCCEEEE
Confidence 7777665433 23 2 3444443211 11111235778888888877 8999655
Q ss_pred CCCCChHHHHHHHHcCCcE
Q psy17999 196 GHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 196 dHt~g~~~~~aAvalGA~v 214 (335)
+=-....-...++++||+.
T Consensus 179 GGI~~~~~v~~al~~GAdg 197 (328)
T 2gjl_A 179 GGFADGRGLVAALALGADA 197 (328)
T ss_dssp SSCCSHHHHHHHHHHTCSE
T ss_pred CCCCCHHHHHHHHHcCCCE
Confidence 4333333445667789983
No 39
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=95.63 E-value=0.078 Score=49.34 Aligned_cols=81 Identities=17% Similarity=0.132 Sum_probs=68.4
Q ss_pred cCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC----CHHHHHHHHhc---CCcEEEeCCCCC
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN----NIPLIKYAASK---QKPLIISTGMLP 117 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~----n~~LL~~~a~~---gkPvilStG~~~ 117 (335)
-|+.+++.+|.++|+++|+.++.++.|++.++.+.++|.+++=|-.+|+. ++..-..++.. +..+|-..|..
T Consensus 136 ~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~- 214 (258)
T 4a29_A 136 ILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGIS- 214 (258)
T ss_dssp GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSC-
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCC-
Confidence 38999999999999999999999999999999999999999999988875 44445555543 66677779999
Q ss_pred CHHHHHHHH
Q psy17999 118 SIEHVDNIY 126 (335)
Q Consensus 118 tl~Ei~~Av 126 (335)
|.+++....
T Consensus 215 t~~dv~~l~ 223 (258)
T 4a29_A 215 ERNEIEELR 223 (258)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999998754
No 40
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.57 E-value=0.41 Score=45.30 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHHc-CCceEec-----cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCH
Q psy17999 46 FSQEEYVMLQQCADQV-DIMFTAS-----AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSI 119 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~-Gi~f~st-----pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl 119 (335)
++.+++.+..+.+++. +..|..- |-..+.++.+.+.+++++.++.++- ..+++++.+.+.||+.+. . +.
T Consensus 60 ~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~p--~~~~~~l~~~g~~v~~~v--~-s~ 134 (326)
T 3bo9_A 60 MKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGNP--TKYIRELKENGTKVIPVV--A-SD 134 (326)
T ss_dssp CCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSCC--HHHHHHHHHTTCEEEEEE--S-SH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCCc--HHHHHHHHHcCCcEEEEc--C-CH
Confidence 5778877766666653 2333333 3335678888899999999988753 788899988999999865 4 77
Q ss_pred HHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC-ccCCCchHHHHHHHHCCCCCeecCCCC
Q psy17999 120 EHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP-YHDINLNVIHTLRSRYPDIPIGYSGHE 198 (335)
Q Consensus 120 ~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~-~~~~nL~~i~~L~~~fp~~pVG~SdHt 198 (335)
++...+.+ .| . +.+++++.. +... -...++..++.+++.. ++||..++=-
T Consensus 135 ~~a~~a~~---~G-a-----------------------D~i~v~g~~-~GG~~G~~~~~~ll~~i~~~~-~iPviaaGGI 185 (326)
T 3bo9_A 135 SLARMVER---AG-A-----------------------DAVIAEGME-SGGHIGEVTTFVLVNKVSRSV-NIPVIAAGGI 185 (326)
T ss_dssp HHHHHHHH---TT-C-----------------------SCEEEECTT-SSEECCSSCHHHHHHHHHHHC-SSCEEEESSC
T ss_pred HHHHHHHH---cC-C-----------------------CEEEEECCC-CCccCCCccHHHHHHHHHHHc-CCCEEEECCC
Confidence 77766543 23 2 344444321 0000 0235778888988888 8999666544
Q ss_pred CChHHHHHHHHcCCc
Q psy17999 199 NGVHVCYAAVAMGAQ 213 (335)
Q Consensus 199 ~g~~~~~aAvalGA~ 213 (335)
....-...++++||+
T Consensus 186 ~~~~dv~~al~~GA~ 200 (326)
T 3bo9_A 186 ADGRGMAAAFALGAE 200 (326)
T ss_dssp CSHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHhCCC
Confidence 434445567789998
No 41
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.46 E-value=0.6 Score=43.69 Aligned_cols=66 Identities=12% Similarity=0.102 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHc---CCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 48 QEEYVMLQQCADQV---DIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 48 ~e~~~~L~~~~~~~---Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
+|++.++....+.. ++.+...-|+.+.++...+.|+++|==-|+......+++-++++|.|+++..
T Consensus 63 ~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh 131 (280)
T 1eye_A 63 AVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMH 131 (280)
T ss_dssp ---HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEc
Confidence 45555555444444 9999999999999999999999999877776556689999999999999953
No 42
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=95.45 E-value=0.053 Score=51.94 Aligned_cols=39 Identities=26% Similarity=0.523 Sum_probs=32.5
Q ss_pred HHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 179 VIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 179 ~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
.+..|++.+|+++||+=.|.. | ..-+++|+..||+.|+-
T Consensus 203 lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 203 GVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHA 244 (337)
T ss_dssp HHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEE
Confidence 378889999999999987764 4 66679999999999994
No 43
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.42 E-value=0.37 Score=45.62 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHH-cCCceEeccCC-----hhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCH
Q psy17999 46 FSQEEYVMLQQCADQ-VDIMFTASAMD-----QVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSI 119 (335)
Q Consensus 46 l~~e~~~~L~~~~~~-~Gi~f~stpfd-----~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl 119 (335)
++.+++.+..+..++ .+..|..-.|- .+.++.+.+.|+|++.++.+.- .++++++-+.+.||+++. . +.
T Consensus 46 ~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~p--~~~i~~l~~~g~~v~~~v--~-~~ 120 (332)
T 2z6i_A 46 APKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNP--SKYMERFHEAGIIVIPVV--P-SV 120 (332)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCG--GGTHHHHHHTTCEEEEEE--S-SH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCCh--HHHHHHHHHcCCeEEEEe--C-CH
Confidence 466666555554443 23344433332 5668888899999999998743 567888888899999886 4 77
Q ss_pred HHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC--CCCCCccCCCchHHHHHHHHCCCCCeecCCC
Q psy17999 120 EHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS--AYPTPYHDINLNVIHTLRSRYPDIPIGYSGH 197 (335)
Q Consensus 120 ~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s--~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdH 197 (335)
++...+.+ .| . +.+++++.. .+. ....++..++.+++.. ++||.-++=
T Consensus 121 ~~a~~~~~---~G-a-----------------------D~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~-~iPViaaGG 170 (332)
T 2z6i_A 121 ALAKRMEK---IG-A-----------------------DAVIAEGMEAGGHI--GKLTTMTLVRQVATAI-SIPVIAAGG 170 (332)
T ss_dssp HHHHHHHH---TT-C-----------------------SCEEEECTTSSEEC--CSSCHHHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHHHH---cC-C-----------------------CEEEEECCCCCCCC--CCccHHHHHHHHHHhc-CCCEEEECC
Confidence 76655433 23 2 344444321 110 1235678888999888 899976654
Q ss_pred CCChHHHHHHHHcCCcEE
Q psy17999 198 ENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 198 t~g~~~~~aAvalGA~vI 215 (335)
-....-..+++++||+.+
T Consensus 171 I~~~~~~~~al~~GAdgV 188 (332)
T 2z6i_A 171 IADGEGAAAGFMLGAEAV 188 (332)
T ss_dssp CCSHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHcCCCEE
Confidence 444555667788999833
No 44
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.27 E-value=0.15 Score=46.39 Aligned_cols=84 Identities=10% Similarity=0.104 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHcCCceEecc----------CChhhH----HHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeC
Q psy17999 49 EEYVMLQQCADQVDIMFTASA----------MDQVSF----DFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIIST 113 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp----------fd~~sv----d~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilSt 113 (335)
+...++.+.|+++|+.++... ++...+ ..+.+.|+|+++++- -.++.+++++.+ .+.||+.+-
T Consensus 132 ~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~--~~~~~~l~~i~~~~~ipvva~G 209 (273)
T 2qjg_A 132 RDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY--TGDIDSFRDVVKGCPAPVVVAG 209 (273)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC--CSSHHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHhCCCCEEEEe
Confidence 467889999999999998755 555443 667789999999984 368999999874 589999988
Q ss_pred CCCC-CHHHHHHHHHHHHh-cCC
Q psy17999 114 GMLP-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 114 G~~~-tl~Ei~~Av~~i~~-g~~ 134 (335)
|... +.++..+.+..+.. |..
T Consensus 210 Gi~~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 210 GPKTNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp CSCCSSHHHHHHHHHHHHHHTCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCc
Confidence 8772 37776664444433 543
No 45
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.23 E-value=0.13 Score=46.54 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=74.4
Q ss_pred HHHHHHHHHHcC-CceE-eccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 51 YVMLQQCADQVD-IMFT-ASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 51 ~~~L~~~~~~~G-i~f~-stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
...+.+.++++. +.+- -|+++.+.++.+.+.|.|++-.+. ++.++++.+.+.|.|+|+ |.. |.+|+..|.+
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~~g~~~i~--Gv~-t~~e~~~A~~- 128 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG---LNPKIVKLCQDLNFPITP--GVN-NPMAIEIALE- 128 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHTTCCEEC--EEC-SHHHHHHHHH-
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC---CCHHHHHHHHHhCCCEEe--ccC-CHHHHHHHHH-
Confidence 345555666663 3322 368899999999999999996553 778999999999999998 667 9999988754
Q ss_pred HHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCC-CchHHHHHHHHCCCCCe
Q psy17999 129 VKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDI-NLNVIHTLRSRYPDIPI 192 (335)
Q Consensus 129 i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~-nL~~i~~L~~~fp~~pV 192 (335)
.|. +++-+ ||+. .+ .+..+..++..+|++|+
T Consensus 129 --~Ga------------------------d~vk~-----Fpa~--~~gG~~~lk~l~~~~~~ipv 160 (224)
T 1vhc_A 129 --MGI------------------------SAVKF-----FPAE--ASGGVKMIKALLGPYAQLQI 160 (224)
T ss_dssp --TTC------------------------CEEEE-----TTTT--TTTHHHHHHHHHTTTTTCEE
T ss_pred --CCC------------------------CEEEE-----eeCc--cccCHHHHHHHHhhCCCCeE
Confidence 243 33322 7843 23 47888999998888887
No 46
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=95.20 E-value=0.061 Score=50.15 Aligned_cols=131 Identities=11% Similarity=0.151 Sum_probs=73.7
Q ss_pred CCceEeccCChhhHHHHHhCCCCEEEEc--CC--------CCC---CHHH----HHHHHhcCCcEE--EeC-------CC
Q psy17999 62 DIMFTASAMDQVSFDFLLSANVPFIKIG--SG--------DSN---NIPL----IKYAASKQKPLI--IST-------GM 115 (335)
Q Consensus 62 Gi~f~stpfd~~svd~l~~l~v~~~KIa--S~--------d~~---n~~L----L~~~a~~gkPvi--lSt-------G~ 115 (335)
++.+..-.-+.+.++.+.+.|++.+-|. .. ..+ |+.. ++++-+.|.+|- |++ +.
T Consensus 72 ~~~v~~l~~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~ 151 (295)
T 1ydn_A 72 GVRYSVLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGP 151 (295)
T ss_dssp SSEEEEECSSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEE
T ss_pred CCEEEEEeCCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCC
Confidence 5554332244555666666666665553 21 111 3333 333334566665 443 23
Q ss_pred CCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec
Q psy17999 116 LPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
. +++++.+.++.+.+ |.. .++|-- +..+-+|.. ....+..+++.+|++|+++
T Consensus 152 ~-~~~~~~~~~~~~~~~G~d-----------------------~i~l~D-t~G~~~P~~--~~~lv~~l~~~~~~~~l~~ 204 (295)
T 1ydn_A 152 V-TPQAVASVTEQLFSLGCH-----------------------EVSLGD-TIGRGTPDT--VAAMLDAVLAIAPAHSLAG 204 (295)
T ss_dssp C-CHHHHHHHHHHHHHHTCS-----------------------EEEEEE-TTSCCCHHH--HHHHHHHHHTTSCGGGEEE
T ss_pred C-CHHHHHHHHHHHHhcCCC-----------------------EEEecC-CCCCcCHHH--HHHHHHHHHHhCCCCeEEE
Confidence 4 66666666665555 433 233332 233434443 3455888999896689998
Q ss_pred CCCC-CC--hHHHHHHHHcCCcEEEeccCC
Q psy17999 195 SGHE-NG--VHVCYAAVAMGAQIIEKHFTL 221 (335)
Q Consensus 195 SdHt-~g--~~~~~aAvalGA~vIEkH~tl 221 (335)
=.|. .| ..-+++|+..||+.|+ .|+
T Consensus 205 H~Hn~~Gla~an~l~Ai~aG~~~vd--~sv 232 (295)
T 1ydn_A 205 HYHDTGGRALDNIRVSLEKGLRVFD--ASV 232 (295)
T ss_dssp EEBCTTSCHHHHHHHHHHHTCCEEE--EBT
T ss_pred EECCCcchHHHHHHHHHHhCCCEEE--ecc
Confidence 7775 34 5556899999999999 455
No 47
>1c89_A RD3, antifreeze protein type III; thermal hysteresis protein, ICE binding protein; NMR {Pachycara brachycephalum} SCOP: b.85.1.1 b.85.1.1 PDB: 1c8a_A 3nla_A 3rdn_A
Probab=95.20 E-value=0.023 Score=46.55 Aligned_cols=61 Identities=20% Similarity=0.241 Sum_probs=56.3
Q ss_pred eEEEEeecCCCCcccccCCcEEeeCCCCCCCcchHHHHhcchhhcccCCCCcccCCCCCCC
Q psy17999 273 KCIVSSCDIQAGTVLQEFHVCIKVAEPKGICGTRYASVMGRKVNRDIRRDESIQDIDLDPV 333 (335)
Q Consensus 273 rsl~a~~di~~G~~l~~~dl~~kr~~~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~~ 333 (335)
.|++|++-|+-.+-||.-+...+.--+.||+.+++..++|+.++|.+..|+.|-.+.++.+
T Consensus 3 ~SVVA~qLIPiNTALT~~Mm~~~vv~P~GIPa~ei~~ivg~QVNraV~~g~TlMP~MVK~Y 63 (134)
T 1c89_A 3 ASVVANQLIPINTALTLIMMKAEVVTPMGIPAEEIPNLVGMQVNRAVPLGTTLMPDMVKNY 63 (134)
T ss_dssp CEEEESSCBCSSCCCCTTTEEEECCSSCCSBSTTHHHHTTCCCSSCBCTTEECCTTTCSSC
T ss_pred cceeeeeeeechhhhhHHHHhceecCCCCCCHHHHHHHHHHhhcccccCCceechHHHhhh
Confidence 4999999999999999999999876678999999999999999999999999988887755
No 48
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.16 E-value=0.17 Score=50.81 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHHh----cCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAAS----KQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a~----~gk 107 (335)
+...+..+.+.++.. ++.++. ++.+.+.+..+.+.|+|+++|+-+. .-++.+|..+++ .+.
T Consensus 254 ~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~i 333 (490)
T 4avf_A 254 SKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGV 333 (490)
T ss_dssp BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTC
T ss_pred chhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCC
Confidence 344556666666776 777666 4899999999999999999995222 335666666665 489
Q ss_pred cEEEeCCCCCCHHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~~ 128 (335)
|||-+-|.. +.+++.+|+..
T Consensus 334 PVIa~GGI~-~~~di~kal~~ 353 (490)
T 4avf_A 334 PLIADGGIR-FSGDLAKAMVA 353 (490)
T ss_dssp CEEEESCCC-SHHHHHHHHHH
T ss_pred cEEEeCCCC-CHHHHHHHHHc
Confidence 999999999 99999998753
No 49
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.10 E-value=1.3 Score=42.00 Aligned_cols=141 Identities=14% Similarity=0.145 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHcCCceEeccCC-----------------------------------------hhhHHHHHhCCCCEEE
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD-----------------------------------------QVSFDFLLSANVPFIK 87 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd-----------------------------------------~~svd~l~~l~v~~~K 87 (335)
+.|++|.+.+++.|-.++.-.|. .+++..+.+.|.|.++
T Consensus 83 ~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVe 162 (338)
T 1z41_A 83 EGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIE 162 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 45889999999999776655542 1334566678999999
Q ss_pred EcCC----------CCCC-----------------HHHHHHHHhc-CCcEEEeCCC------CCCHHHHHHHHHHHHhcC
Q psy17999 88 IGSG----------DSNN-----------------IPLIKYAASK-QKPLIISTGM------LPSIEHVDNIYTTVKQYH 133 (335)
Q Consensus 88 IaS~----------d~~n-----------------~~LL~~~a~~-gkPvilStG~------~~tl~Ei~~Av~~i~~g~ 133 (335)
|..+ ..+| ..+++++.+. +.||.+.... +.+.++....++.+...+
T Consensus 163 ih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~G 242 (338)
T 1z41_A 163 IHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQG 242 (338)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTT
T ss_pred eccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcC
Confidence 9764 2223 4556665543 8899988432 227888877777776522
Q ss_pred CCCceeecccCCCCCCCCcccccCceEEeeecCC------CCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHH
Q psy17999 134 SNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA------YPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAA 207 (335)
Q Consensus 134 ~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~------YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aA 207 (335)
- ..+|++.. +|.+ ...++..+..+|+.+ ++||.-.+--.....+..+
T Consensus 243 v-------------------------d~i~v~~~~~~~~~~~~~-~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~ 295 (338)
T 1z41_A 243 V-------------------------DLIDCSSGALVHADINVF-PGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEI 295 (338)
T ss_dssp C-------------------------CEEEEECCCSSCCCCCCC-TTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHH
T ss_pred C-------------------------CEEEEecCccccCCCCCC-ccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHH
Confidence 2 22333221 2222 246788899999999 8999655544446667778
Q ss_pred HHcC-CcEEE
Q psy17999 208 VAMG-AQIIE 216 (335)
Q Consensus 208 valG-A~vIE 216 (335)
+..| |+.|-
T Consensus 296 l~~G~aD~V~ 305 (338)
T 1z41_A 296 LQNGRADLIF 305 (338)
T ss_dssp HHTTSCSEEE
T ss_pred HHcCCceEEe
Confidence 8888 88654
No 50
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=95.05 E-value=0.54 Score=40.71 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
+..+.+.+.++..|+.++.. +.++.+.+.|++++.+++.+.. ...++++. .++.+.++. . |.+|+..+.+
T Consensus 57 ~~~~~l~~~~~~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~-~~~~~~~~-~~~~~~v~~--~-t~~e~~~~~~- 126 (215)
T 1xi3_A 57 EIGKTLRQLTREYDALFFVD----DRVDVALAVDADGVQLGPEDMP-IEVAKEIA-PNLIIGASV--Y-SLEEALEAEK- 126 (215)
T ss_dssp HHHHHHHHHHHHTTCEEEEE----SCHHHHHHHTCSEEEECTTSCC-HHHHHHHC-TTSEEEEEE--S-SHHHHHHHHH-
T ss_pred HHHHHHHHHHHHcCCeEEEc----ChHHHHHHcCCCEEEECCccCC-HHHHHHhC-CCCEEEEec--C-CHHHHHHHHh-
Confidence 44566777888889888774 5678888999999999887764 44555553 344444444 5 8888765432
Q ss_pred HHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC----ccCCCchHHHHHHHHCCCCCeecC-CCCCChHH
Q psy17999 129 VKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP----YHDINLNVIHTLRSRYPDIPIGYS-GHENGVHV 203 (335)
Q Consensus 129 i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~----~~~~nL~~i~~L~~~fp~~pVG~S-dHt~g~~~ 203 (335)
.| . +.++++.+ ||+. ....++..+..+++.+ ++||.-+ +=+ ...+
T Consensus 127 --~g-~-----------------------d~i~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv 176 (215)
T 1xi3_A 127 --KG-A-----------------------DYLGAGSV--FPTKTKEDARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNA 176 (215)
T ss_dssp --HT-C-----------------------SEEEEECS--SCC----CCCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTH
T ss_pred --cC-C-----------------------CEEEEcCC--ccCCCCCCCCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHH
Confidence 23 2 45555432 4432 2346788899998888 8888443 222 2222
Q ss_pred HHHHHHcCCc
Q psy17999 204 CYAAVAMGAQ 213 (335)
Q Consensus 204 ~~aAvalGA~ 213 (335)
. .+..+||+
T Consensus 177 ~-~~~~~Ga~ 185 (215)
T 1xi3_A 177 R-EVLKTGVD 185 (215)
T ss_dssp H-HHHTTTCS
T ss_pred H-HHHHcCCC
Confidence 2 24567887
No 51
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.03 E-value=0.14 Score=48.98 Aligned_cols=122 Identities=12% Similarity=0.130 Sum_probs=84.2
Q ss_pred ChhhHHHHHhCCCCEEEEcCCCC----CCHHHHHHHHhcCCcEEEeC---CCCCCHHHHHHHHHHHHh-cCCCCceeecc
Q psy17999 71 DQVSFDFLLSANVPFIKIGSGDS----NNIPLIKYAASKQKPLIIST---GMLPSIEHVDNIYTTVKQ-YHSNLSILHCV 142 (335)
Q Consensus 71 d~~svd~l~~l~v~~~KIaS~d~----~n~~LL~~~a~~gkPvilSt---G~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~ 142 (335)
..+.++.+.+.|++.+-|.- .+ .-.+.++++.+.|+.++.+- ..+ +++.+.+.++.+.. |.. .|-+|
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~-~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~-~~e~~~~ia~~~~~~Ga~--~i~l~- 169 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVAT-HCTEADVSKQHIEYARNLGMDTVGFLMMSHMI-PAEKLAEQGKLMESYGAT--CIYMA- 169 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEE-ETTCGGGGHHHHHHHHHHTCEEEEEEESTTSS-CHHHHHHHHHHHHHHTCS--EEEEE-
T ss_pred cHHHHHHHHhCCcCEEEEEE-eccHHHHHHHHHHHHHHCCCEEEEEEEeCCCC-CHHHHHHHHHHHHHCCCC--EEEEC-
Confidence 46778888888999888862 23 22456666677798887773 355 88888888888776 543 22233
Q ss_pred cCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC-CCCeecCCCCC-C--hHHHHHHHHcCCcEEEec
Q psy17999 143 SAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP-DIPIGYSGHEN-G--VHVCYAAVAMGAQIIEKH 218 (335)
Q Consensus 143 ~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH 218 (335)
=+..+=+|.+-. ..+..|++.+| ++||++=.|.. | ...+++|+..||+.|+
T Consensus 170 ---------------------DT~G~~~P~~v~--~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd-- 224 (345)
T 1nvm_A 170 ---------------------DSGGAMSMNDIR--DRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVD-- 224 (345)
T ss_dssp ---------------------CTTCCCCHHHHH--HHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEE--
T ss_pred ---------------------CCcCccCHHHHH--HHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEE--
Confidence 233444444323 34788899996 89999977753 4 6667999999999998
Q ss_pred cCCC
Q psy17999 219 FTLD 222 (335)
Q Consensus 219 ~tld 222 (335)
-|+.
T Consensus 225 ~tv~ 228 (345)
T 1nvm_A 225 ASLA 228 (345)
T ss_dssp EBGG
T ss_pred ecch
Confidence 4554
No 52
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=95.00 E-value=0.13 Score=48.09 Aligned_cols=132 Identities=14% Similarity=0.135 Sum_probs=75.7
Q ss_pred CCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCC---------------HHHHHHHHhcCCcEEEeC---------CC
Q psy17999 62 DIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNN---------------IPLIKYAASKQKPLIIST---------GM 115 (335)
Q Consensus 62 Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n---------------~~LL~~~a~~gkPvilSt---------G~ 115 (335)
|+.+..-....+.++.+.+.|++.+-|-- .+..+ .+.++++-+.|++|-+.. |.
T Consensus 73 ~~~~~~l~~~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~ 152 (298)
T 2cw6_A 73 GINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGK 152 (298)
T ss_dssp TCBCCEECCSHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBS
T ss_pred CCEEEEEcCCHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCC
Confidence 44433333455566666666666655421 11100 123444445576664321 23
Q ss_pred CCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec
Q psy17999 116 LPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
. +++++.+.++.+.+ |.. .|-+|+. ..+=+|.+-.+ .+..|++.+|++|+|+
T Consensus 153 ~-~~~~~~~~~~~~~~~Ga~--~i~l~DT----------------------~G~~~P~~~~~--lv~~l~~~~~~~~i~~ 205 (298)
T 2cw6_A 153 I-SPAKVAEVTKKFYSMGCY--EISLGDT----------------------IGVGTPGIMKD--MLSAVMQEVPLAALAV 205 (298)
T ss_dssp C-CHHHHHHHHHHHHHTTCS--EEEEEET----------------------TSCCCHHHHHH--HHHHHHHHSCGGGEEE
T ss_pred C-CHHHHHHHHHHHHHcCCC--EEEecCC----------------------CCCcCHHHHHH--HHHHHHHhCCCCeEEE
Confidence 4 67777776666665 443 3333332 23334443333 4788899998899999
Q ss_pred CCCC-CC--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 195 SGHE-NG--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 195 SdHt-~g--~~~~~aAvalGA~vIEkH~tld 222 (335)
=.|. .| ..-+++|+..||+.|+- |+.
T Consensus 206 H~Hn~~Gla~An~laA~~aGa~~vd~--tv~ 234 (298)
T 2cw6_A 206 HCHDTYGQALANTLMALQMGVSVVDS--SVA 234 (298)
T ss_dssp EEBCTTSCHHHHHHHHHHTTCCEEEE--BTT
T ss_pred EECCCCchHHHHHHHHHHhCCCEEEe--ecc
Confidence 7665 34 55578999999999984 554
No 53
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.98 E-value=0.063 Score=49.67 Aligned_cols=82 Identities=9% Similarity=0.154 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhC-CCCEEEEcCCCCCC----HHHHHHHHhc---CCcEEEeCCCCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSA-NVPFIKIGSGDSNN----IPLIKYAASK---QKPLIISTGMLP 117 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l-~v~~~KIaS~d~~n----~~LL~~~a~~---gkPvilStG~~~ 117 (335)
|+.+++.+|.++|+++|+.++..+.+.+.++.+.++ |++++=|-.+++.. +.....+.+. +.++|-..|.+
T Consensus 134 l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~- 212 (251)
T 1i4n_A 134 LTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIK- 212 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCC-
Confidence 788999999999999999999999999999999999 99999998887653 3444555443 56777778888
Q ss_pred CHHHHHHHHHH
Q psy17999 118 SIEHVDNIYTT 128 (335)
Q Consensus 118 tl~Ei~~Av~~ 128 (335)
|.+++..+.+.
T Consensus 213 t~edv~~~~~~ 223 (251)
T 1i4n_A 213 DPRELKDLRGK 223 (251)
T ss_dssp CGGGHHHHTTT
T ss_pred CHHHHHHHHHh
Confidence 88888877553
No 54
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.91 E-value=0.16 Score=46.36 Aligned_cols=130 Identities=9% Similarity=0.059 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHc-CCceE-eccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 50 EYVMLQQCADQV-DIMFT-ASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 50 ~~~~L~~~~~~~-Gi~f~-stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
....+.+..+++ ++.+- -|+.+.+.++.+.+.|.+|+-.+. .|.++++++.+.|.|++- |.+ |+.|+..|.+
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~gi~~ip--Gv~-TptEi~~A~~ 145 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG---FNPNTVRACQEIGIDIVP--GVN-NPSTVEAALE 145 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHHTCEEEC--EEC-SHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEEc--CCC-CHHHHHHHHH
Confidence 344444444544 33222 479999999999999999997654 689999999999999988 667 9999999965
Q ss_pred HHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCC-CchHHHHHHHHCCCCCeecCCCCCChHHHHH
Q psy17999 128 TVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDI-NLNVIHTLRSRYPDIPIGYSGHENGVHVCYA 206 (335)
Q Consensus 128 ~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~-nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~a 206 (335)
. |.. ++= -||+. .+ .+..|..|+..||++|+.=.+--. ..-...
T Consensus 146 ~---Gad------------------------~vK-----~FPa~--~~gG~~~lkal~~p~p~ip~~ptGGI~-~~n~~~ 190 (232)
T 4e38_A 146 M---GLT------------------------TLK-----FFPAE--ASGGISMVKSLVGPYGDIRLMPTGGIT-PSNIDN 190 (232)
T ss_dssp T---TCC------------------------EEE-----ECSTT--TTTHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHH
T ss_pred c---CCC------------------------EEE-----ECcCc--cccCHHHHHHHHHHhcCCCeeeEcCCC-HHHHHH
Confidence 3 432 221 27764 34 578899999989888873221111 222334
Q ss_pred HHHcCCc--EEEeccC
Q psy17999 207 AVAMGAQ--IIEKHFT 220 (335)
Q Consensus 207 AvalGA~--vIEkH~t 220 (335)
..++||. ++=.-++
T Consensus 191 ~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 191 YLAIPQVLACGGTWMV 206 (232)
T ss_dssp HHTSTTBCCEEECGGG
T ss_pred HHHCCCeEEEECchhc
Confidence 4566765 4443333
No 55
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=94.91 E-value=0.064 Score=50.79 Aligned_cols=52 Identities=21% Similarity=0.342 Sum_probs=37.6
Q ss_pred CCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 167 AYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 167 ~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
.+=+|.+-.+ .+..|++.+|++++|+=.|.. | ..-+++|+..||+.|+ .|+.
T Consensus 181 G~~~P~~v~~--lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd--~tv~ 235 (307)
T 1ydo_A 181 GAANPAQVET--VLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFD--GSAG 235 (307)
T ss_dssp CCCCHHHHHH--HHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEE--EBGG
T ss_pred CCcCHHHHHH--HHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEE--Eccc
Confidence 3444443333 378889999889999977753 4 6667999999999998 4554
No 56
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.85 E-value=0.23 Score=48.30 Aligned_cols=145 Identities=16% Similarity=0.095 Sum_probs=84.2
Q ss_pred CCHHHHHHHHHHHHHcC---CceE--eccCChhhHHHHHhCCCCEEEEcCCCCCCH---HHHHHHHhc--CCcEEEeCCC
Q psy17999 46 FSQEEYVMLQQCADQVD---IMFT--ASAMDQVSFDFLLSANVPFIKIGSGDSNNI---PLIKYAASK--QKPLIISTGM 115 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~G---i~f~--stpfd~~svd~l~~l~v~~~KIaS~d~~n~---~LL~~~a~~--gkPvilStG~ 115 (335)
++.+++.+..+.+++.+ +... ..+.+.+.++.+.+.|+|++-|.+..-... +.++++.+. +.|||..+.
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v- 157 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV- 157 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEE-
T ss_pred CCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeee-
Confidence 78888777777777643 3222 234567889999999999999955443333 345666665 788888543
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH---HCCCCCe
Q psy17999 116 LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS---RYPDIPI 192 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~---~fp~~pV 192 (335)
. |.++...+.+. |.. .+.+ |+-.+ -||++..-+.....++..|..+++ .. ++||
T Consensus 158 ~-t~e~A~~a~~a---GAD---~I~v--G~gpG-------------s~~~tr~~~g~g~p~~~~l~~v~~~~~~~-~iPV 214 (366)
T 4fo4_A 158 A-TAEGARALIEA---GVS---AVKV--GIGPG-------------SICTTRIVTGVGVPQITAIADAAGVANEY-GIPV 214 (366)
T ss_dssp C-SHHHHHHHHHH---TCS---EEEE--CSSCS-------------TTBCHHHHHCCCCCHHHHHHHHHHHHGGG-TCCE
T ss_pred C-CHHHHHHHHHc---CCC---EEEE--ecCCC-------------CCCCcccccCcccchHHHHHHHHHHHhhc-CCeE
Confidence 3 67777766542 432 2222 11111 145432111111234556666554 44 7898
Q ss_pred ecCCCCCChHHHHHHHHcCCcE
Q psy17999 193 GYSGHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 193 G~SdHt~g~~~~~aAvalGA~v 214 (335)
.-++=-....-...|.++||+.
T Consensus 215 IA~GGI~~~~di~kala~GAd~ 236 (366)
T 4fo4_A 215 IADGGIRFSGDISKAIAAGASC 236 (366)
T ss_dssp EEESCCCSHHHHHHHHHTTCSE
T ss_pred EEeCCCCCHHHHHHHHHcCCCE
Confidence 6554443344556789999983
No 57
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.73 E-value=0.41 Score=42.18 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=79.5
Q ss_pred cCCHHHHHHHHHHHHHcCCc---eEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHH
Q psy17999 45 EFSQEEYVMLQQCADQVDIM---FTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEH 121 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~---f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~E 121 (335)
.++.+++.++.+..++.++. ++.. +.++.+.+.|+|.+.++..+. ....++++.. ++.+.++. . |.+|
T Consensus 52 ~~~~~~~~~~~~~l~~~~~~~~~l~v~----~~~~~a~~~gad~v~l~~~~~-~~~~~~~~~~-~~~ig~sv--~-t~~~ 122 (221)
T 1yad_A 52 SKSAADILKLLDLIFEGGIDKRKLVMN----GRVDIALFSTIHRVQLPSGSF-SPKQIRARFP-HLHIGRSV--H-SLEE 122 (221)
T ss_dssp TSCHHHHHHHHHHHHHTTCCGGGEEEE----SCHHHHHTTTCCEEEECTTSC-CHHHHHHHCT-TCEEEEEE--C-SHHH
T ss_pred CCCHHHHHHHHHHHHHhcCcCCeEEEe----ChHHHHHHcCCCEEEeCCCcc-CHHHHHHHCC-CCEEEEEc--C-CHHH
Confidence 46777777777777776654 4433 467889999999999987764 4555666543 55555555 5 8888
Q ss_pred HHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc----cCCCchHHHHHHHHCCCCCeecCCC
Q psy17999 122 VDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY----HDINLNVIHTLRSRYPDIPIGYSGH 197 (335)
Q Consensus 122 i~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~----~~~nL~~i~~L~~~fp~~pVG~SdH 197 (335)
+..+.+ .| . +++++..+ ||++. ...++..+..+++.+ ++||.-.+=
T Consensus 123 ~~~a~~---~g-a-----------------------D~i~~~~~--f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GG 172 (221)
T 1yad_A 123 AVQAEK---ED-A-----------------------DYVLFGHV--FETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGG 172 (221)
T ss_dssp HHHHHH---TT-C-----------------------SEEEEECC--C----------CHHHHHHHHHHHC-CSCEEEESS
T ss_pred HHHHHh---CC-C-----------------------CEEEECCc--cccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECC
Confidence 776643 23 2 44444322 33321 135788888888888 888843332
Q ss_pred CCChHHHHHHHHcCCcE
Q psy17999 198 ENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 198 t~g~~~~~aAvalGA~v 214 (335)
- ...-...++..||+.
T Consensus 173 I-~~~nv~~~~~~Ga~g 188 (221)
T 1yad_A 173 M-TPDRLRDVKQAGADG 188 (221)
T ss_dssp C-CGGGHHHHHHTTCSE
T ss_pred C-CHHHHHHHHHcCCCE
Confidence 2 233334556689983
No 58
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=94.72 E-value=0.15 Score=48.17 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=68.8
Q ss_pred CcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC-------------CCCC-HHH
Q psy17999 33 WANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG-------------DSNN-IPL 98 (335)
Q Consensus 33 ~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~-------------d~~n-~~L 98 (335)
|..+|.+.++.-.|+.++..++.+.|++.|+..+.-+|+++.+..+.++|+|++-+.-+ .+.+ ...
T Consensus 134 idG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~ 213 (286)
T 2p10_A 134 IDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSL 213 (286)
T ss_dssp CCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHH
T ss_pred ccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHH
Confidence 44567776677779999999999999999999999999999999999999999877655 2223 344
Q ss_pred HHHHHhc------CCcEEEeC-CCCCCHHHHHHHHHH
Q psy17999 99 IKYAASK------QKPLIIST-GMLPSIEHVDNIYTT 128 (335)
Q Consensus 99 L~~~a~~------gkPvilSt-G~~~tl~Ei~~Av~~ 128 (335)
++++.+. +.-|+.-- |.+ +.+++..+++.
T Consensus 214 i~~i~~a~~~vnpdvivLc~gGpIs-tpeDv~~~l~~ 249 (286)
T 2p10_A 214 INECIEAARTIRDDIIILSHGGPIA-NPEDARFILDS 249 (286)
T ss_dssp HHHHHHHHHHHCSCCEEEEESTTCC-SHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEecCCCCC-CHHHHHHHHhc
Confidence 4444331 22233333 345 77777777653
No 59
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.69 E-value=0.65 Score=43.14 Aligned_cols=160 Identities=12% Similarity=0.103 Sum_probs=95.0
Q ss_pred CCceEeccCC--h----hhHHHHHhCCCC-EEEEcCC--C------C-CCH----HHHHHHHhc-CCcEEEeCCCCCCHH
Q psy17999 62 DIMFTASAMD--Q----VSFDFLLSANVP-FIKIGSG--D------S-NNI----PLIKYAASK-QKPLIISTGMLPSIE 120 (335)
Q Consensus 62 Gi~f~stpfd--~----~svd~l~~l~v~-~~KIaS~--d------~-~n~----~LL~~~a~~-gkPvilStG~~~tl~ 120 (335)
+..++...+. . +.++.+.+.++| ++-|.-+ . + .+. .+++++-+. ++||+++.....+.+
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 6777777663 2 234566677889 8877321 1 1 144 445555443 889999876545888
Q ss_pred HHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecC----------------------CCCC-CccCCC
Q psy17999 121 HVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS----------------------AYPT-PYHDIN 176 (335)
Q Consensus 121 Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s----------------------~YP~-~~~~~n 176 (335)
++.+.++.+.+ |- +.+.+|.+. .|.- +.....
T Consensus 173 ~~~~~a~~~~~~G~------------------------d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~ 228 (311)
T 1jub_A 173 HFDIMAEILNQFPL------------------------TYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTA 228 (311)
T ss_dssp HHHHHHHHHTTSCC------------------------CEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHH
T ss_pred HHHHHHHHHHHcCC------------------------cEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHH
Confidence 88887777766 42 233333221 0000 112235
Q ss_pred chHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 177 LNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 177 L~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
+..+..+++..+ ++||.-++--....-+..++++||+.+-- -+..-. -+|.-++++.+.++..-...|-
T Consensus 229 ~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~v----g~~~l~------~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQI----GTALHK------EGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE----CHHHHH------HCTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE----chHHHh------cCcHHHHHHHHHHHHHHHHcCC
Confidence 778888988774 78996655444455566677889996652 111100 1356788888888776666664
No 60
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.61 E-value=0.62 Score=45.79 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=67.6
Q ss_pred ccCChhhHHHHHhCCCCEEEEcCCCCCC---HHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeeccc
Q psy17999 68 SAMDQVSFDFLLSANVPFIKIGSGDSNN---IPLIKYAASK-QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVS 143 (335)
Q Consensus 68 tpfd~~svd~l~~l~v~~~KIaS~d~~n---~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~ 143 (335)
.+.+.+.++.+.+.|+|++-|.+..-.. ..+++++.+. +.|||..+ .. |.++...+.+ .|.. .+..
T Consensus 142 ~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~-V~-t~e~A~~a~~---aGAD---~I~v-- 211 (400)
T 3ffs_A 142 GVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGN-VV-TEEATKELIE---NGAD---GIKV-- 211 (400)
T ss_dssp CCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEE-EC-SHHHHHHHHH---TTCS---EEEE--
T ss_pred CCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEee-cC-CHHHHHHHHH---cCCC---EEEE--
Confidence 3344677888899999999986554444 4667777664 88998842 34 7777766544 2432 1111
Q ss_pred CCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHC--CCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 144 AYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRY--PDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 144 g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~f--p~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
|.-.+ . .|++..-......++..+..+.+.. .++||.-++=-....-...|.++||+
T Consensus 212 G~g~G---------s----~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd 270 (400)
T 3ffs_A 212 GIGPG---------S----ICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGAS 270 (400)
T ss_dssp CC----------------------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCS
T ss_pred eCCCC---------c----CcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCC
Confidence 21100 0 1433211112234567777776542 27898544433334445568889998
No 61
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.51 E-value=0.97 Score=40.81 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=82.9
Q ss_pred HHHHHHHHHHcCCceE-------------eccCChhhHHHHHhCCCCEEEEcCCCCCC----HHHHHHHHhcCCcEEEeC
Q psy17999 51 YVMLQQCADQVDIMFT-------------ASAMDQVSFDFLLSANVPFIKIGSGDSNN----IPLIKYAASKQKPLIIST 113 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~-------------stpfd~~svd~l~~l~v~~~KIaS~d~~n----~~LL~~~a~~gkPvilSt 113 (335)
...|.+..+..+++++ .+| +.+.++.+.+.|+|++-+.+....+ ..+++++.+.|.+++.+.
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~-~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (232)
T 3igs_A 58 IDNLRMTRSLVSVPIIGIIKRDLDESPVRITP-FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADC 136 (232)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSC-SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCcceEeCc-cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 4556666667777755 223 3456788889999999888765433 567888888899988876
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEE--eeecCCCCCCccCCCchHHHHHHHHCCCCC
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSI--LHCVSAYPTPYHDINLNVIHTLRSRYPDIP 191 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~l--lHC~s~YP~~~~~~nL~~i~~L~~~fp~~p 191 (335)
. |.+|...|.+ .|.. ++. +|..+..-. ....++..+..+++. ++|
T Consensus 137 --~-t~eea~~a~~---~Gad------------------------~Ig~~~~g~t~~~~-~~~~~~~~i~~l~~~--~ip 183 (232)
T 3igs_A 137 --S-SVDDGLACQR---LGAD------------------------IIGTTMSGYTTPDT-PEEPDLPLVKALHDA--GCR 183 (232)
T ss_dssp --C-SHHHHHHHHH---TTCS------------------------EEECTTTTSSSSSC-CSSCCHHHHHHHHHT--TCC
T ss_pred --C-CHHHHHHHHh---CCCC------------------------EEEEcCccCCCCCC-CCCCCHHHHHHHHhc--CCc
Confidence 4 8888877654 2432 221 121111101 134688889999875 799
Q ss_pred eecCCCCCChHHHHHHHHcCCc
Q psy17999 192 IGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 192 VG~SdHt~g~~~~~aAvalGA~ 213 (335)
|.-++--....-...+.++||+
T Consensus 184 vIA~GGI~t~~d~~~~~~~Gad 205 (232)
T 3igs_A 184 VIAEGRYNSPALAAEAIRYGAW 205 (232)
T ss_dssp EEEESCCCSHHHHHHHHHTTCS
T ss_pred EEEECCCCCHHHHHHHHHcCCC
Confidence 8655544444555667788998
No 62
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.48 E-value=0.22 Score=43.27 Aligned_cols=112 Identities=11% Similarity=0.201 Sum_probs=74.3
Q ss_pred CCceEe-ccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceee
Q psy17999 62 DIMFTA-SAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILH 140 (335)
Q Consensus 62 Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~ 140 (335)
++.+.. ++.+.+.++.+.+.|+|++ +... .+..+++.+-+.|+|++. |.. |..|+..|++. |.
T Consensus 62 ~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~--~~~~~~~~~~~~g~~vi~--g~~-t~~e~~~a~~~---Ga------- 125 (205)
T 1wa3_A 62 GAIIGAGTVTSVEQCRKAVESGAEFI-VSPH--LDEEISQFCKEKGVFYMP--GVM-TPTELVKAMKL---GH------- 125 (205)
T ss_dssp TCEEEEESCCSHHHHHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEEC--EEC-SHHHHHHHHHT---TC-------
T ss_pred CcEEEecccCCHHHHHHHHHcCCCEE-EcCC--CCHHHHHHHHHcCCcEEC--CcC-CHHHHHHHHHc---CC-------
Confidence 455544 7788888998889999999 7654 347789999899999997 666 88998887542 32
Q ss_pred cccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcE
Q psy17999 141 CVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 141 c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~v 214 (335)
+++-. +|. +...+..+..+++.+|++||.-++--. ..-......+||+.
T Consensus 126 -----------------d~vk~-----~~~--~~~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~ 174 (205)
T 1wa3_A 126 -----------------TILKL-----FPG--EVVGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLA 174 (205)
T ss_dssp -----------------CEEEE-----TTH--HHHHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSC
T ss_pred -----------------CEEEE-----cCc--cccCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCE
Confidence 22221 232 123567788888878788884333222 22334566788873
No 63
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=94.47 E-value=1.7 Score=41.31 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=50.6
Q ss_pred HHHHHHHHH---H-HHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEe
Q psy17999 49 EEYVMLQQC---A-DQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIS 112 (335)
Q Consensus 49 e~~~~L~~~---~-~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilS 112 (335)
|++.++... . +..++.+...-|+.+-++...+.|.++|==-|+...+..+++-+++.+.|+++.
T Consensus 68 eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlm 135 (314)
T 2vef_A 68 EEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIM 135 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEE
Confidence 455544433 3 345999999999999999999999999976666555567888899999999997
No 64
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.46 E-value=0.091 Score=49.34 Aligned_cols=44 Identities=18% Similarity=0.314 Sum_probs=34.7
Q ss_pred chHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 177 LNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 177 L~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
...+..+++.+|++|+++=.|.. | ..-+++|+..||+.|+ .|+.
T Consensus 191 ~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd--~tv~ 237 (302)
T 2ftp_A 191 RRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFD--SSVA 237 (302)
T ss_dssp HHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE--EBGG
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE--eccc
Confidence 44588899989889999977753 4 6667899999999998 5554
No 65
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=94.41 E-value=0.3 Score=51.47 Aligned_cols=49 Identities=27% Similarity=0.554 Sum_probs=37.2
Q ss_pred CCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 167 AYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 167 ~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
.|=+|.+-.+ .|..|++.+|+++|++=.|.. | .+.+++|+..||+.|+-
T Consensus 285 G~~~P~~v~~--lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 285 GLLKPTACTM--LVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp SCCCHHHHHH--HHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCcCHHHHHH--HHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEe
Confidence 4444554333 378899999999999988864 4 66679999999999984
No 66
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.31 E-value=0.2 Score=49.27 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC-------------CCCCHHHHHHHHh----cCCc
Q psy17999 47 SQEEYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG-------------DSNNIPLIKYAAS----KQKP 108 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~-------------d~~n~~LL~~~a~----~gkP 108 (335)
+......+.+.++.+|+.++. ++.+.+.+..+.+.|+|+++++.+ ..-++.+|..+++ .+.|
T Consensus 169 ~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IP 248 (400)
T 3ffs_A 169 SLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIP 248 (400)
T ss_dssp BHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCC
T ss_pred cccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCC
Confidence 445566666666777999985 899999999999999999999521 1345667777764 5899
Q ss_pred EEEeCCCCCCHHHHHHHHH
Q psy17999 109 LIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 109 vilStG~~~tl~Ei~~Av~ 127 (335)
||-+-|.. +.+++.+|+.
T Consensus 249 VIA~GGI~-~~~di~kala 266 (400)
T 3ffs_A 249 IIADGGIR-YSGDIGKALA 266 (400)
T ss_dssp EEEESCCC-SHHHHHHHHT
T ss_pred EEecCCCC-CHHHHHHHHH
Confidence 99999999 9999998865
No 67
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=94.25 E-value=0.8 Score=42.72 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCCCCHHHHH----------------HHHhcCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDSNNIPLIK----------------YAASKQK 107 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~~n~~LL~----------------~~a~~gk 107 (335)
++.+++.++.+..++.|+.+.+++ .+++.++.|.+.|++.+.+ |-+..|..+.+ .+.+.|.
T Consensus 114 ~~~~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~ag~~~v~i-~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi 192 (348)
T 3iix_A 114 XMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLL-RHETANPVLHRKLRPDTSFENRLNCLLTLKELGY 192 (348)
T ss_dssp GTTHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHHTCCEEEC-CCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHhCCCEEee-eeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC
Confidence 344788888998888888777544 6788889999999998875 34444433333 3334566
Q ss_pred cEEEe--CCC-CCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCC-CCc-------cCC
Q psy17999 108 PLIIS--TGM-LPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYP-TPY-------HDI 175 (335)
Q Consensus 108 PvilS--tG~-~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP-~~~-------~~~ 175 (335)
++-.. .|. .-|.+++.+.+++++. +-. .+-++....+| +|. ..-
T Consensus 193 ~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~------------------------~i~i~~~~p~~gt~l~~~~~~~~~e 248 (348)
T 3iix_A 193 ETGAGSMVGLPGQTIDDLVDDLLFLKEHDFD------------------------MVGIGPFIPHPDTPLANEKKGDFTL 248 (348)
T ss_dssp EEEECBEESCTTCCHHHHHHHHHHHHHHTCS------------------------EECCEECCCCTTSTTTTSCCCCHHH
T ss_pred eeccceEEeCCCCCHHHHHHHHHHHHhcCCC------------------------EEeeeeeecCCCCCcccCCCCCHHH
Confidence 54322 243 2388888888888876 322 11112222222 222 122
Q ss_pred CchHHHHHHHHCCCCCeecCC--CCCChHHHHHHHHcCCcEEE
Q psy17999 176 NLNVIHTLRSRYPDIPIGYSG--HENGVHVCYAAVAMGAQIIE 216 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pVG~Sd--Ht~g~~~~~aAvalGA~vIE 216 (335)
-++.+..+|..+|+..|-.+. ++.+......|...||++|=
T Consensus 249 ~~~~~a~~R~~lp~~~i~~~~~~~~~~~~~~~~~l~~Gan~i~ 291 (348)
T 3iix_A 249 TLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIM 291 (348)
T ss_dssp HHHHHHHHHHHSTTSBCBCCHHHHHHSTTHHHHHHTTTCCEEC
T ss_pred HHHHHHHHHHHCCCCCchhcchhhhcCHHHHHHHHhcCCcEEe
Confidence 245666777778765443211 22345566778899999654
No 68
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.15 E-value=0.91 Score=39.73 Aligned_cols=135 Identities=10% Similarity=0.127 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCceEec--------c----CChhhHHHHHhCCCCEEEEcCCCCCC-----HHHHHHHHhc--CCcEEEeC
Q psy17999 53 MLQQCADQVDIMFTAS--------A----MDQVSFDFLLSANVPFIKIGSGDSNN-----IPLIKYAASK--QKPLIIST 113 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~st--------p----fd~~svd~l~~l~v~~~KIaS~d~~n-----~~LL~~~a~~--gkPvilSt 113 (335)
.+.+.++..+++++.. . -+.+.++.+.+.|++++-+++....+ ..+++++.+. +++++++.
T Consensus 47 ~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~ 126 (223)
T 1y0e_A 47 DILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI 126 (223)
T ss_dssp HHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC
Confidence 3445555567777421 0 13467888888999999999887654 4888898887 88888754
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeec-ccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCe
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHC-VSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI 192 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c-~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV 192 (335)
. |.+|...+.+ .|-. ++.. ..|.. . .+..+. ....++..+..+++.+ ++||
T Consensus 127 --~-t~~e~~~~~~---~G~d---~i~~~~~g~t-~----------------~~~~~~-~~~~~~~~~~~~~~~~-~ipv 178 (223)
T 1y0e_A 127 --A-TVEEAKNAAR---LGFD---YIGTTLHGYT-S----------------YTQGQL-LYQNDFQFLKDVLQSV-DAKV 178 (223)
T ss_dssp --S-SHHHHHHHHH---TTCS---EEECTTTTSS-T----------------TSTTCC-TTHHHHHHHHHHHHHC-CSEE
T ss_pred --C-CHHHHHHHHH---cCCC---EEEeCCCcCc-C----------------CCCCCC-CCcccHHHHHHHHhhC-CCCE
Confidence 4 8888765432 2322 1110 11110 0 000111 1234677888999888 8998
Q ss_pred ecCCCCCChHHHHHHHHcCCcEE
Q psy17999 193 GYSGHENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 193 G~SdHt~g~~~~~aAvalGA~vI 215 (335)
.-++=-....-...+.++||+.+
T Consensus 179 ia~GGI~~~~~~~~~~~~Gad~v 201 (223)
T 1y0e_A 179 IAEGNVITPDMYKRVMDLGVHCS 201 (223)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEE
T ss_pred EEecCCCCHHHHHHHHHcCCCEE
Confidence 55443333455556778899844
No 69
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.05 E-value=1.6 Score=38.56 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=79.3
Q ss_pred HHHHHHHcCCceEec---c---------CChhhHHHHHhCCCCEEEEcCCCCCC------HHHHHHHHhc--CCcEEEeC
Q psy17999 54 LQQCADQVDIMFTAS---A---------MDQVSFDFLLSANVPFIKIGSGDSNN------IPLIKYAASK--QKPLIIST 113 (335)
Q Consensus 54 L~~~~~~~Gi~f~st---p---------fd~~svd~l~~l~v~~~KIaS~d~~n------~~LL~~~a~~--gkPvilSt 113 (335)
+.+..+..+++|+.- - -+.+.++.+.+.|++++-++.....+ ..+++++.+. +++|+++.
T Consensus 61 i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 61 IKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp HHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 444455567777421 0 13467888889999999988775543 5788888877 78888765
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceE--EeeecCCCCC-CccCCCchHHHHHHHHCCCC
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLS--ILHCVSAYPT-PYHDINLNVIHTLRSRYPDI 190 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~--llHC~s~YP~-~~~~~nL~~i~~L~~~fp~~ 190 (335)
. |++|...+.+ .|- +++ .++.+.. .+ .....++..+..+++. ++
T Consensus 141 --~-t~~ea~~a~~---~Ga------------------------d~i~~~v~g~~~-~~~~~~~~~~~~i~~~~~~--~i 187 (234)
T 1yxy_A 141 --S-TFDEGLVAHQ---AGI------------------------DFVGTTLSGYTP-YSRQEAGPDVALIEALCKA--GI 187 (234)
T ss_dssp --S-SHHHHHHHHH---TTC------------------------SEEECTTTTSST-TSCCSSSCCHHHHHHHHHT--TC
T ss_pred --C-CHHHHHHHHH---cCC------------------------CEEeeeccccCC-CCcCCCCCCHHHHHHHHhC--CC
Confidence 4 8888555433 232 232 2222211 11 1234678888888874 78
Q ss_pred CeecCCCCCChHHHHHHHHcCCcEE
Q psy17999 191 PIGYSGHENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 191 pVG~SdHt~g~~~~~aAvalGA~vI 215 (335)
||.-++--....-...+.++||+.+
T Consensus 188 pvia~GGI~s~~~~~~~~~~Gad~v 212 (234)
T 1yxy_A 188 AVIAEGKIHSPEEAKKINDLGVAGI 212 (234)
T ss_dssp CEEEESCCCSHHHHHHHHTTCCSEE
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEE
Confidence 8865543333555556677899833
No 70
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.03 E-value=0.32 Score=47.05 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC--C-----------CCCHHHHHHHHh----cCCc
Q psy17999 47 SQEEYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG--D-----------SNNIPLIKYAAS----KQKP 108 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~--d-----------~~n~~LL~~~a~----~gkP 108 (335)
+......+.+.++..++.++. .+.+.+.+..+.+.|+|+++++.+ . .-++.++..+++ .+.|
T Consensus 130 ~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iP 209 (361)
T 3khj_A 130 SLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIP 209 (361)
T ss_dssp BHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCe
Confidence 344456667777777999996 899999999999999999999511 1 334566666643 5899
Q ss_pred EEEeCCCCCCHHHHHHHHHH
Q psy17999 109 LIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 109 vilStG~~~tl~Ei~~Av~~ 128 (335)
||-+-|.. +.+++.+|+..
T Consensus 210 VIA~GGI~-~~~di~kala~ 228 (361)
T 3khj_A 210 IIADGGIR-YSGDIGKALAV 228 (361)
T ss_dssp EEEESCCC-SHHHHHHHHHH
T ss_pred EEEECCCC-CHHHHHHHHHc
Confidence 99999999 99999888653
No 71
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=93.98 E-value=0.3 Score=45.52 Aligned_cols=78 Identities=14% Similarity=0.128 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHc---CCceE-eccCChhhHHHHHhCCCCEEEE-----cCC-CCCCHHHHHHHHhc-CCcEEEeCCCCCC
Q psy17999 50 EYVMLQQCADQV---DIMFT-ASAMDQVSFDFLLSANVPFIKI-----GSG-DSNNIPLIKYAASK-QKPLIISTGMLPS 118 (335)
Q Consensus 50 ~~~~L~~~~~~~---Gi~f~-stpfd~~svd~l~~l~v~~~KI-----aS~-d~~n~~LL~~~a~~-gkPvilStG~~~t 118 (335)
+..++.+.|+.+ |+.++ -+.-|+.....++++|++++-- ||+ .+.|+.+|+.+.+. +.|||..-|.+ |
T Consensus 120 D~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~-T 198 (265)
T 1wv2_A 120 NVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVG-T 198 (265)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-S
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCC-C
Confidence 466777777777 99999 5888999999999999999854 344 46799999999885 89999999999 9
Q ss_pred HHHHHHHHHH
Q psy17999 119 IEHVDNIYTT 128 (335)
Q Consensus 119 l~Ei~~Av~~ 128 (335)
.++...|++.
T Consensus 199 PsDAa~AmeL 208 (265)
T 1wv2_A 199 ASDAAIAMEL 208 (265)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999999875
No 72
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.96 E-value=1.3 Score=39.99 Aligned_cols=131 Identities=13% Similarity=0.038 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcCCceE-------------eccCChhhHHHHHhCCCCEEEEcCCCCC----CHHHHHHHHhcCCcEEEeC
Q psy17999 51 YVMLQQCADQVDIMFT-------------ASAMDQVSFDFLLSANVPFIKIGSGDSN----NIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~-------------stpfd~~svd~l~~l~v~~~KIaS~d~~----n~~LL~~~a~~gkPvilSt 113 (335)
...|.+..+..+++++ .+| +.+.++.+.+.|+|++-+.+.... -..+++++.+.|.+++.+.
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~-~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (229)
T 3q58_A 58 IENLRTVRPHLSVPIIGIIKRDLTGSPVRITP-YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADC 136 (229)
T ss_dssp HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC-SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCCceEeCc-cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEec
Confidence 4456666667777754 223 345678888999999988776543 3468888888899998876
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCee
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIG 193 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG 193 (335)
+ |.+|...|.+. |-. -|...-+|+. ..-. ....++..+..+++. ++||.
T Consensus 137 --~-t~eea~~a~~~---Gad--~Ig~~~~g~t--------------------~~~~-~~~~~~~li~~l~~~--~ipvI 185 (229)
T 3q58_A 137 --S-TVNEGISCHQK---GIE--FIGTTLSGYT--------------------GPIT-PVEPDLAMVTQLSHA--GCRVI 185 (229)
T ss_dssp --S-SHHHHHHHHHT---TCS--EEECTTTTSS--------------------SSCC-CSSCCHHHHHHHHTT--TCCEE
T ss_pred --C-CHHHHHHHHhC---CCC--EEEecCccCC--------------------CCCc-CCCCCHHHHHHHHHc--CCCEE
Confidence 4 88888877542 432 0111112211 1101 134578888888874 79986
Q ss_pred cCCCCCChHHHHHHHHcCCc
Q psy17999 194 YSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 194 ~SdHt~g~~~~~aAvalGA~ 213 (335)
-++--....-...+.++||+
T Consensus 186 A~GGI~t~~d~~~~~~~Gad 205 (229)
T 3q58_A 186 AEGRYNTPALAANAIEHGAW 205 (229)
T ss_dssp EESSCCSHHHHHHHHHTTCS
T ss_pred EECCCCCHHHHHHHHHcCCC
Confidence 55544445555667788998
No 73
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.96 E-value=0.18 Score=44.40 Aligned_cols=77 Identities=8% Similarity=0.051 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHc--CCceEeccCChhhHHHHHhCCCCEEEEcCC-------CC----CCHHHHHHHHh-cCCcEEEeCCC
Q psy17999 50 EYVMLQQCADQV--DIMFTASAMDQVSFDFLLSANVPFIKIGSG-------DS----NNIPLIKYAAS-KQKPLIISTGM 115 (335)
Q Consensus 50 ~~~~L~~~~~~~--Gi~f~stpfd~~svd~l~~l~v~~~KIaS~-------d~----~n~~LL~~~a~-~gkPvilStG~ 115 (335)
.+.++.+.+++. |+.++.++.+.+.+..+.+.|++++.+... +. .++.+++++.+ .+.|||.+-|.
T Consensus 105 ~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI 184 (223)
T 1y0e_A 105 TLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNV 184 (223)
T ss_dssp CHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSC
T ss_pred CHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCC
Confidence 456778888888 999999999999888899999999987532 22 24557777765 48999999999
Q ss_pred CCCHHHHHHHHH
Q psy17999 116 LPSIEHVDNIYT 127 (335)
Q Consensus 116 ~~tl~Ei~~Av~ 127 (335)
+ +.+++.++++
T Consensus 185 ~-~~~~~~~~~~ 195 (223)
T 1y0e_A 185 I-TPDMYKRVMD 195 (223)
T ss_dssp C-SHHHHHHHHH
T ss_pred C-CHHHHHHHHH
Confidence 9 9999888755
No 74
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=93.94 E-value=0.26 Score=46.89 Aligned_cols=75 Identities=8% Similarity=0.041 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHcCCceEeccC-------------Chhh----HHHHHhCCCC----EEEEcCCCCCCHHHHHHHHhcCC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM-------------DQVS----FDFLLSANVP----FIKIGSGDSNNIPLIKYAASKQK 107 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf-------------d~~s----vd~l~~l~v~----~~KIaS~d~~n~~LL~~~a~~gk 107 (335)
+++.++.+.|+++|++++..|| |++. +....++|.| ++|+.-.+ .+=+-++.+..
T Consensus 163 ~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~e----~f~~Vv~a~~v 238 (307)
T 3fok_A 163 EATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVVE----EMERVMESTTM 238 (307)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECCT----THHHHGGGCSS
T ss_pred HHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCcH----HHHHHHHhCCC
Confidence 7799999999999999999742 3333 3455678999 99998773 23333445689
Q ss_pred cEEEeCCCCC-CHHHHHHHHH
Q psy17999 108 PLIISTGMLP-SIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~-tl~Ei~~Av~ 127 (335)
||+++-|... +.+|..+-++
T Consensus 239 PVViaGG~k~~~~~e~L~~v~ 259 (307)
T 3fok_A 239 PTLLLGGEGGNDPDATFASWE 259 (307)
T ss_dssp CEEEECCSCC--CHHHHHHHH
T ss_pred CEEEeCCCCCCCHHHHHHHHH
Confidence 9999977552 3455555444
No 75
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.91 E-value=0.82 Score=42.51 Aligned_cols=143 Identities=13% Similarity=0.082 Sum_probs=84.6
Q ss_pred HHHHHHHHHH-HcCCceEeccCChhhHHHHHhC--CCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEeC----CCCCCHHH
Q psy17999 50 EYVMLQQCAD-QVDIMFTASAMDQVSFDFLLSA--NVPFIKIGSGDSNN-IPLIKYAASKQKPLIIST----GMLPSIEH 121 (335)
Q Consensus 50 ~~~~L~~~~~-~~Gi~f~stpfd~~svd~l~~l--~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilSt----G~~~tl~E 121 (335)
....+.+..+ ..++++...-++.+.++...+. |.+++==-|+.-.+ ..++.-+++.|.|+|+.. |+..|.+|
T Consensus 65 rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~ 144 (271)
T 2yci_X 65 VMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDAND 144 (271)
T ss_dssp HHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHH
T ss_pred HHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHH
Confidence 3444444444 4599999999999999999988 99998744554321 468888889999999954 44446444
Q ss_pred H----HHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCC---chHHHHHHHHC-CCCCe-
Q psy17999 122 V----DNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDIN---LNVIHTLRSRY-PDIPI- 192 (335)
Q Consensus 122 i----~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~n---L~~i~~L~~~f-p~~pV- 192 (335)
+ .+.++.+.+ .|++. +=+++-+.-.+.....+-| |+.+..+++.+ |++|+
T Consensus 145 ~~~~l~~~~~~a~~-----------~Gi~~----------~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l 203 (271)
T 2yci_X 145 RSQLAMELVANADA-----------HGIPM----------TELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTV 203 (271)
T ss_dssp HHHHHHHHHHHHHH-----------TTCCG----------GGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEE
T ss_pred HHHHHHHHHHHHHH-----------CCCCc----------ccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence 4 344444443 12220 2234444434433333455 55555666666 67887
Q ss_pred -ecCCCCCC--------hHHHHHHHHcCCc
Q psy17999 193 -GYSGHENG--------VHVCYAAVAMGAQ 213 (335)
Q Consensus 193 -G~SdHt~g--------~~~~~aAvalGA~ 213 (335)
|.|==+.| .....+|++.|+.
T Consensus 204 ~G~Snksfg~~~r~~l~~t~~~~a~~~g~~ 233 (271)
T 2yci_X 204 LGLSNVSQKCPDRPLINRTYLVMAMTAGLD 233 (271)
T ss_dssp EEGGGGGTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred EeeCccccCCchHHHHHHHHHHHHHHHhCC
Confidence 76633333 2233456677776
No 76
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=93.86 E-value=0.6 Score=44.44 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHH-cCCceEec-cCChhhHHHHHhC----CCCEEEE--cCCCCCC---------------HHHHHHHH
Q psy17999 47 SQEEYVMLQQCADQ-VDIMFTAS-AMDQVSFDFLLSA----NVPFIKI--GSGDSNN---------------IPLIKYAA 103 (335)
Q Consensus 47 ~~e~~~~L~~~~~~-~Gi~f~st-pfd~~svd~l~~l----~v~~~KI--aS~d~~n---------------~~LL~~~a 103 (335)
+++++..+.+.++. .+..+.+- +-..+.++...+. |++.+-| ++.++.+ .+.++++.
T Consensus 53 ~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~ 132 (325)
T 3eeg_A 53 SPGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAK 132 (325)
T ss_dssp CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHH
T ss_pred CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 55666666665554 34443322 2344555544443 6665433 3333321 24556666
Q ss_pred hcCCcEEEe---CCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchH
Q psy17999 104 SKQKPLIIS---TGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNV 179 (335)
Q Consensus 104 ~~gkPvilS---tG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~ 179 (335)
+.|+.|.++ .|.. +++.+.+.++.+.. |.. .|-||+. ..+-+|.+-.+ .
T Consensus 133 ~~g~~v~f~~~d~~~~-~~~~~~~~~~~~~~~G~~--~i~l~DT----------------------~G~~~P~~v~~--l 185 (325)
T 3eeg_A 133 KVVHEVEFFCEDAGRA-DQAFLARMVEAVIEAGAD--VVNIPDT----------------------TGYMLPWQYGE--R 185 (325)
T ss_dssp TTSSEEEEEEETGGGS-CHHHHHHHHHHHHHHTCS--EEECCBS----------------------SSCCCHHHHHH--H
T ss_pred HCCCEEEEEccccccc-hHHHHHHHHHHHHhcCCC--EEEecCc----------------------cCCcCHHHHHH--H
Confidence 677777765 3455 77777777777766 654 4555553 23334443333 3
Q ss_pred HHHHHHHCCC---CCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 180 IHTLRSRYPD---IPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 180 i~~L~~~fp~---~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
+..|++.+|+ ++|++=.|.. | ...+++|+..||+.|+ -|+.
T Consensus 186 v~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd--~tv~ 232 (325)
T 3eeg_A 186 IKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVE--CTIN 232 (325)
T ss_dssp HHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEE--EBGG
T ss_pred HHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEE--Eecc
Confidence 7788999976 8999987764 4 6667999999999998 4553
No 77
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.85 E-value=0.16 Score=47.82 Aligned_cols=77 Identities=9% Similarity=0.094 Sum_probs=63.7
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
....+.++++|+.-..+ +--++|.+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..++
T Consensus 68 ~~a~~~a~~~g~~~~y~----d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 143 (393)
T 4fb5_A 68 GLAEARAGEFGFEKATA----DWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAER 143 (393)
T ss_dssp TTHHHHHHHHTCSEEES----CHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeecC----CHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHh
Confidence 44567888999863322 12245666789999999999999999999999999999999999999999999998876
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 144 ~ 144 (393)
T 4fb5_A 144 S 144 (393)
T ss_dssp S
T ss_pred c
Confidence 3
No 78
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=93.84 E-value=0.75 Score=42.48 Aligned_cols=153 Identities=12% Similarity=0.079 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHc-CCceEeccCChhhHHHHHhC--CCCEEEEcCCCCCCH-HHHHHHHhcCCcEEEeC----CCCCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFTASAMDQVSFDFLLSA--NVPFIKIGSGDSNNI-PLIKYAASKQKPLIIST----GMLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~stpfd~~svd~l~~l--~v~~~KIaS~d~~n~-~LL~~~a~~gkPvilSt----G~~~t 118 (335)
..|++.++....++. ++++...-++.+.++...+. |.++|==-|+.-.++ .++.-+++.|.|+|+.. |...|
T Consensus 53 ~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t 132 (262)
T 1f6y_A 53 KVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKD 132 (262)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSS
T ss_pred hHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCC
Confidence 356777777777766 99999999999999999887 999887445442332 68888999999999964 44335
Q ss_pred HHHHH----HHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHC-CCCCe
Q psy17999 119 IEHVD----NIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRY-PDIPI 192 (335)
Q Consensus 119 l~Ei~----~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~f-p~~pV 192 (335)
+++.. +.++.+.+ |-.. +=++-+-|+-+. ++-...+--.|+.+..+++.+ |++|+
T Consensus 133 ~~~~~~~~~~~~~~a~~~Gi~~-~~IilDPg~g~~------------------g~~~~~~~~~l~~l~~l~~~~~pg~pv 193 (262)
T 1f6y_A 133 SDTRLAFAMELVAAADEFGLPM-EDLYIDPLILPA------------------NVAQDHAPEVLKTLQQIKMLADPAPKT 193 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCG-GGEEEECCCCCT------------------TTCTTHHHHHHHHHHHHHTCCSSCCEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCc-ccEEEeCCCCcC------------------CCChHHHHHHHHHHHHHHHHhCCCCCE
Confidence 55543 33333333 3110 112222222100 111112234567777777766 78887
Q ss_pred --ecCCCCCC--------hHHHHHHHHcCCcEEEec
Q psy17999 193 --GYSGHENG--------VHVCYAAVAMGAQIIEKH 218 (335)
Q Consensus 193 --G~SdHt~g--------~~~~~aAvalGA~vIEkH 218 (335)
|.|==+.| ......|++.|+.+.=-|
T Consensus 194 l~G~Srksfg~~~~~~l~~t~~~~a~~~g~~~~iv~ 229 (262)
T 1f6y_A 194 VLGLSNVSQNCQNRPLINRTFLAMAMACGLMSAIAD 229 (262)
T ss_dssp EEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEeecCCcCCCCHHHHHHHHHHHHHHHHhCCeEEEC
Confidence 76633333 223456778888855444
No 79
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.84 E-value=0.87 Score=39.83 Aligned_cols=124 Identities=19% Similarity=0.199 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+....+.+.|+..|+.++.. +.++.+.++|++++.++..+.. +..+.+ .+. +++..... |.+|+..+.+
T Consensus 65 ~~~~~l~~~~~~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~----~~~~~~~~g~-~~~~~s~~-t~~e~~~a~~ 134 (227)
T 2tps_A 65 KFAEKAQAACREAGVPFIVN----DDVELALNLKADGIHIGQEDAN----AKEVRAAIGD-MILGVSAH-TMSEVKQAEE 134 (227)
T ss_dssp HHHHHHHHHHHHHTCCEEEE----SCHHHHHHHTCSEEEECTTSSC----HHHHHHHHTT-SEEEEEEC-SHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEc----CHHHHHHHcCCCEEEECCCccC----HHHHHHhcCC-cEEEEecC-CHHHHHHHHh
Confidence 44566778888889988875 4678888999999999877653 333332 454 44443345 8888665543
Q ss_pred HHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC-----ccCCCchHHHHHHHHCCCCCeecC-CCCCCh
Q psy17999 128 TVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP-----YHDINLNVIHTLRSRYPDIPIGYS-GHENGV 201 (335)
Q Consensus 128 ~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~-----~~~~nL~~i~~L~~~fp~~pVG~S-dHt~g~ 201 (335)
.|- +.+++ -+-||+. ....++..+..+++.++++||.-+ +=+..
T Consensus 135 ---~g~------------------------d~v~~--~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~- 184 (227)
T 2tps_A 135 ---DGA------------------------DYVGL--GPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITID- 184 (227)
T ss_dssp ---HTC------------------------SEEEE--CCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTT-
T ss_pred ---CCC------------------------CEEEE--CCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHH-
Confidence 232 22222 1123322 234578889999988733888433 22221
Q ss_pred HHHHHHHHcCCc
Q psy17999 202 HVCYAAVAMGAQ 213 (335)
Q Consensus 202 ~~~~aAvalGA~ 213 (335)
.+ ..+...||+
T Consensus 185 nv-~~~~~~Ga~ 195 (227)
T 2tps_A 185 NA-APVIQAGAD 195 (227)
T ss_dssp TS-HHHHHTTCS
T ss_pred HH-HHHHHcCCC
Confidence 12 224557887
No 80
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.78 E-value=0.21 Score=45.15 Aligned_cols=104 Identities=14% Similarity=0.212 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHc-CCceE-eccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 50 EYVMLQQCADQV-DIMFT-ASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 50 ~~~~L~~~~~~~-Gi~f~-stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
....+.+.++++ ++.+- -|+++.+.++.+.+.|.+++-.+. ++.++++.....|.|+|+ |.. |++|+..|.+
T Consensus 64 ~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~~ 137 (225)
T 1mxs_A 64 GLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG---ITEDILEAGVDSEIPLLP--GIS-TPSEIMMGYA 137 (225)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS---CCHHHHHHHHHCSSCEEC--EEC-SHHHHHHHHT
T ss_pred HHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC---CCHHHHHHHHHhCCCEEE--eeC-CHHHHHHHHH
Confidence 344455566665 33332 257899999999999999997663 688999999999999998 567 9999988753
Q ss_pred HHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCe
Q psy17999 128 TVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI 192 (335)
Q Consensus 128 ~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV 192 (335)
.|. +++-+ ||+.. -..+..+..++..+|++|+
T Consensus 138 ---~Ga------------------------d~vk~-----FPa~~-~~G~~~lk~i~~~~~~ipv 169 (225)
T 1mxs_A 138 ---LGY------------------------RRFKL-----FPAEI-SGGVAAIKAFGGPFGDIRF 169 (225)
T ss_dssp ---TTC------------------------CEEEE-----TTHHH-HTHHHHHHHHHTTTTTCEE
T ss_pred ---CCC------------------------CEEEE-----ccCcc-ccCHHHHHHHHhhCCCCeE
Confidence 243 33222 77321 1257788889988888887
No 81
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=93.76 E-value=2.4 Score=40.33 Aligned_cols=133 Identities=14% Similarity=0.151 Sum_probs=86.2
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCC----------CCC-----------------H
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGD----------SNN-----------------I 96 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d----------~~n-----------------~ 96 (335)
-+|+.++..++.+.=. +++..+.+.|+|.+.|..+. .+| .
T Consensus 140 ~~mt~~eI~~ii~~f~-------------~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~ 206 (349)
T 3hgj_A 140 EPLDEAGMERILQAFV-------------EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPL 206 (349)
T ss_dssp EECCHHHHHHHHHHHH-------------HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH-------------HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHH
Confidence 3699998887765422 35566777889999987654 222 3
Q ss_pred HHHHHHHhc---CCcEEEeCC-------CCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeec-
Q psy17999 97 PLIKYAASK---QKPLIISTG-------MLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCV- 165 (335)
Q Consensus 97 ~LL~~~a~~---gkPvilStG-------~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~- 165 (335)
.+++++.+. ++||.+... .. +++|....++.+...+- ..+|+.
T Consensus 207 eiv~aVR~avG~d~pV~vRls~~~~~~~g~-~~~~~~~la~~L~~~Gv-------------------------d~i~vs~ 260 (349)
T 3hgj_A 207 QVAQAVREVVPRELPLFVRVSATDWGEGGW-SLEDTLAFARRLKELGV-------------------------DLLDCSS 260 (349)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESCCCSTTSC-CHHHHHHHHHHHHHTTC-------------------------CEEEEEC
T ss_pred HHHHHHHHHhcCCceEEEEeccccccCCCC-CHHHHHHHHHHHHHcCC-------------------------CEEEEec
Confidence 455555543 679988543 34 78888887777765222 233333
Q ss_pred -CCCCCC----ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 166 -SAYPTP----YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 166 -s~YP~~----~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
..++.. ....++..+..+|+.+ ++||.-.+--.....+..++..| |++|=
T Consensus 261 g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 261 GGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp CCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred CCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEE
Confidence 223321 1346888899999998 89996655444566777788888 78665
No 82
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=93.73 E-value=0.1 Score=48.94 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
....+.++++|+.-..+ +. ++|.+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..+
T Consensus 60 ~~a~~~a~~~g~~~~y~-----d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 60 TRAREMADRFSVPHAFG-----SYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp HHHHHHHHHHTCSEEES-----SHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCeeeC-----CHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHH
Confidence 45677889999864322 33 4556667999999999999999999999999999999999999999999998877
Q ss_pred hc
Q psy17999 131 QY 132 (335)
Q Consensus 131 ~g 132 (335)
+.
T Consensus 135 ~~ 136 (350)
T 4had_A 135 RN 136 (350)
T ss_dssp HH
T ss_pred Hc
Confidence 63
No 83
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.71 E-value=0.29 Score=46.41 Aligned_cols=74 Identities=8% Similarity=0.091 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC-------CCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHH
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS-------GDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS-------~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~ 124 (335)
.+.+.+++.|+.++..+.+.+.+..+.+.|+|++.+-+ +...++.++.++.+ .+.|||++-|.. +.+++.+
T Consensus 115 ~~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~-~~~dv~~ 193 (326)
T 3bo9_A 115 KYIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIA-DGRGMAA 193 (326)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHH
T ss_pred HHHHHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCC-CHHHHHH
Confidence 34556677899999999999999999999999999932 45678999998875 589999999999 9999998
Q ss_pred HHH
Q psy17999 125 IYT 127 (335)
Q Consensus 125 Av~ 127 (335)
++.
T Consensus 194 al~ 196 (326)
T 3bo9_A 194 AFA 196 (326)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 84
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=93.67 E-value=0.37 Score=49.21 Aligned_cols=119 Identities=14% Similarity=0.168 Sum_probs=78.1
Q ss_pred hhhHHHHHhCCCCEEEEc--CCCCCCH-HHHHHHHhcCCcE--EEeC--C-CCCCHHHHHHHHHHHHh-cCCCCceeecc
Q psy17999 72 QVSFDFLLSANVPFIKIG--SGDSNNI-PLIKYAASKQKPL--IIST--G-MLPSIEHVDNIYTTVKQ-YHSNLSILHCV 142 (335)
Q Consensus 72 ~~svd~l~~l~v~~~KIa--S~d~~n~-~LL~~~a~~gkPv--ilSt--G-~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~ 142 (335)
...++.+.+.|++.+-|- ..++.|. +.++++.+.|+.+ .+|. | .. +++.+.+.++.+.. |.. .|-||+
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~-~~e~~~~~a~~l~~~Gad--~I~L~D 196 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVH-TVEGYVKLAGQLLDMGAD--SIALKD 196 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTC-CHHHHHHHHHHHHHTTCS--EEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCC-CHHHHHHHHHHHHHcCCC--EEEeCC
Confidence 344677778888887764 4445444 3445555568877 4543 3 34 77777777777776 544 455555
Q ss_pred cCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC-CCCeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 143 SAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP-DIPIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 143 ~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
. ..+=+|..-.+ .|..|++.+| +++||+=.|.. | ...+++|+..||++|+-
T Consensus 197 T----------------------~G~~~P~~v~~--lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ 251 (539)
T 1rqb_A 197 M----------------------AALLKPQPAYD--IIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDT 251 (539)
T ss_dssp T----------------------TCCCCHHHHHH--HHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred C----------------------CCCcCHHHHHH--HHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEE
Confidence 3 23334443333 3788898898 89999987764 4 66679999999999984
No 85
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.66 E-value=0.31 Score=43.66 Aligned_cols=102 Identities=13% Similarity=0.187 Sum_probs=74.2
Q ss_pred HHHHHHHHHHcC-Cce-EeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 51 YVMLQQCADQVD-IMF-TASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 51 ~~~L~~~~~~~G-i~f-~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
...+.+.+++++ +.+ .-|+.+.+.++.+.+.|.+++-.+. ++.++++.+.+.|.|+|+ |.. |.+|+..|.+
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~~- 127 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG---LTEPLLKAATEGTIPLIP--GIS-TVSELMLGMD- 127 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS---CCHHHHHHHHHSSSCEEE--EES-SHHHHHHHHH-
T ss_pred HHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEE--ecC-CHHHHHHHHH-
Confidence 345555666664 221 1257889999999999999997664 688999999999999998 566 9999988854
Q ss_pred HHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCC-CchHHHHHHHHCCCCCe
Q psy17999 129 VKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDI-NLNVIHTLRSRYPDIPI 192 (335)
Q Consensus 129 i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~-nL~~i~~L~~~fp~~pV 192 (335)
.|. +++-+ ||+.. + .+..+..++..+|++|+
T Consensus 128 --~Ga------------------------d~v~~-----Fpa~~--~gG~~~lk~i~~~~~~ipv 159 (214)
T 1wbh_A 128 --YGL------------------------KEFKF-----FPAEA--NGGVKALQAIAGPFSQVRF 159 (214)
T ss_dssp --TTC------------------------CEEEE-----TTTTT--TTHHHHHHHHHTTCTTCEE
T ss_pred --CCC------------------------CEEEE-----ecCcc--ccCHHHHHHHhhhCCCCeE
Confidence 243 33322 78432 3 47788899988988887
No 86
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.45 E-value=2.7 Score=38.40 Aligned_cols=142 Identities=11% Similarity=-0.021 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHH-H-cCCceEecc-CC-------hhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhcCCcEEE-eC
Q psy17999 46 FSQEEYVMLQQCAD-Q-VDIMFTASA-MD-------QVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAASKQKPLII-ST 113 (335)
Q Consensus 46 l~~e~~~~L~~~~~-~-~Gi~f~stp-fd-------~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~gkPvil-St 113 (335)
++.+...++.+..+ . ..+++..-. ++ ..-++.+.+.|++.+-++.-... -..+++.+-+.|..+++ .+
T Consensus 76 ~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~ 155 (268)
T 1qop_A 76 VTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICP 155 (268)
T ss_dssp CCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEEC
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEC
Confidence 44444444444434 4 366764422 22 35567777889998888755443 35677777778876444 44
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCee
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIG 193 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG 193 (335)
..+ +.+.+...++. . . .+++|.+ +-.++..-++...-.+..|..+|+.. ++||.
T Consensus 156 p~t-~~~~i~~i~~~---~-~--g~v~~~s------------------~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~ 209 (268)
T 1qop_A 156 PNA-DDDLLRQVASY---G-R--GYTYLLS------------------RSGVTGAENRGALPLHHLIEKLKEYH-AAPAL 209 (268)
T ss_dssp TTC-CHHHHHHHHHH---C-C--SCEEEES------------------SSSCCCSSSCC--CCHHHHHHHHHTT-CCCEE
T ss_pred CCC-CHHHHHHHHhh---C-C--CcEEEEe------------------cCCcCCCccCCCchHHHHHHHHHhcc-CCcEE
Confidence 445 66666655443 1 1 0111211 00234444444444467889999877 88985
Q ss_pred cCCCCCChHHHHHHHHcCCc
Q psy17999 194 YSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 194 ~SdHt~g~~~~~aAvalGA~ 213 (335)
...--........++..||+
T Consensus 210 vggGI~t~e~~~~~~~agAD 229 (268)
T 1qop_A 210 QGFGISSPEQVSAAVRAGAA 229 (268)
T ss_dssp EESSCCSHHHHHHHHHTTCS
T ss_pred EECCCCCHHHHHHHHHcCCC
Confidence 43333335555566889998
No 87
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.35 E-value=0.71 Score=41.18 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-C---CcEEEeC----C----
Q psy17999 49 EEYVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-Q---KPLIIST----G---- 114 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-g---kPvilSt----G---- 114 (335)
..+..+.+.++..+++++.. ..+.+.++.+.+.|+|.+-+++..+.+..+++++.+. + ..+-++. |
T Consensus 62 ~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v 141 (252)
T 1ka9_F 62 ILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEV 141 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEE
T ss_pred ccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEE
Confidence 35677888888899999874 4557888888889999999999999999888777654 3 1233443 1
Q ss_pred ----------CCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHH
Q psy17999 115 ----------MLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLR 184 (335)
Q Consensus 115 ----------~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~ 184 (335)
.. +.++++.+.+ .|. ...+.|.++.--+ ....|+..+..++
T Consensus 142 ~~~g~~~~~~~~-~~e~~~~~~~---~G~------------------------~~i~~~~~~~~g~-~~g~~~~~i~~l~ 192 (252)
T 1ka9_F 142 HVAGGRVPTGLH-AVEWAVKGVE---LGA------------------------GEILLTSMDRDGT-KEGYDLRLTRMVA 192 (252)
T ss_dssp EETTTTEEEEEE-HHHHHHHHHH---HTC------------------------CEEEEEETTTTTT-CSCCCHHHHHHHH
T ss_pred EECCCccccCCc-HHHHHHHHHH---cCC------------------------CEEEEecccCCCC-cCCCCHHHHHHHH
Confidence 12 2344444433 132 3445554331111 1235899999999
Q ss_pred HHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 185 SRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 185 ~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
+.. ++||.-++--....-...+...||+
T Consensus 193 ~~~-~ipvia~GGI~~~~d~~~~~~~Gad 220 (252)
T 1ka9_F 193 EAV-GVPVIASGGAGRMEHFLEAFQAGAE 220 (252)
T ss_dssp HHC-SSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHc-CCCEEEeCCCCCHHHHHHHHHCCCH
Confidence 988 8999655433333333334468887
No 88
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.33 E-value=0.52 Score=47.39 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHHh----cCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAAS----KQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a~----~gk 107 (335)
+...+..+.+..++. ++.++. .+.+.+.+..+.+.|+|+++++.+. ..++.++..+++ .+.
T Consensus 256 ~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~i 335 (496)
T 4fxs_A 256 SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGI 335 (496)
T ss_dssp SHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred chHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCC
Confidence 445566777777776 777766 6899999999999999999996221 234556666553 589
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||.+-|.. +.+++.+|+.
T Consensus 336 PVIa~GGI~-~~~di~kala 354 (496)
T 4fxs_A 336 PVIADGGIR-FSGDISKAIA 354 (496)
T ss_dssp CEEEESCCC-SHHHHHHHHH
T ss_pred eEEEeCCCC-CHHHHHHHHH
Confidence 999999999 9999999865
No 89
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.30 E-value=1.3 Score=42.73 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHc-CCceEeccC--ChhhHHHHHhCCCCEEEEcCCCCCC---HHHHHHHHhc-CCcEEEeCCCCCC
Q psy17999 46 FSQEEYVMLQQCADQV-DIMFTASAM--DQVSFDFLLSANVPFIKIGSGDSNN---IPLIKYAASK-QKPLIISTGMLPS 118 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~-Gi~f~stpf--d~~svd~l~~l~v~~~KIaS~d~~n---~~LL~~~a~~-gkPvilStG~~~t 118 (335)
++.+++.+..+..++. .+.|..... +.+.++.+.+.|+|++-|.+..-.. ...++++.+. +.|||+.+. . |
T Consensus 78 ~s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v-~-t 155 (361)
T 3khj_A 78 MDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV-V-T 155 (361)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE-C-S
T ss_pred CCHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC-C-C
Confidence 5667666555555544 344444433 3677888889999999986554333 3456665554 899998433 4 7
Q ss_pred HHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHH---HHCCCCCeecC
Q psy17999 119 IEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLR---SRYPDIPIGYS 195 (335)
Q Consensus 119 l~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~---~~fp~~pVG~S 195 (335)
.++.+.+.+ .|-. .+.+ |+..+ -+|++..-+.....++..+..++ +.+ ++||.=+
T Consensus 156 ~e~A~~l~~---aGaD---~I~V--G~~~G-------------s~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIA~ 213 (361)
T 3khj_A 156 EEATKELIE---NGAD---GIKV--GIGPG-------------SICTTRIVAGVGVPQITAIEKCSSVASKF-GIPIIAD 213 (361)
T ss_dssp HHHHHHHHH---TTCS---EEEE--CSSCC-------------TTCCHHHHTCBCCCHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred HHHHHHHHH---cCcC---EEEE--ecCCC-------------cCCCcccccCCCCCcHHHHHHHHHHHhhc-CCeEEEE
Confidence 777666543 2432 2221 11100 03433211111123455555553 335 7898544
Q ss_pred CCCCChHHHHHHHHcCCcE
Q psy17999 196 GHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 196 dHt~g~~~~~aAvalGA~v 214 (335)
+=-....-...|+++||+.
T Consensus 214 GGI~~~~di~kala~GAd~ 232 (361)
T 3khj_A 214 GGIRYSGDIGKALAVGASS 232 (361)
T ss_dssp SCCCSHHHHHHHHHHTCSE
T ss_pred CCCCCHHHHHHHHHcCCCE
Confidence 3332344455688899983
No 90
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=93.30 E-value=3.7 Score=39.11 Aligned_cols=65 Identities=14% Similarity=0.065 Sum_probs=52.0
Q ss_pred HHHHHHH----HHHHHHc-CCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 48 QEEYVML----QQCADQV-DIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 48 ~e~~~~L----~~~~~~~-Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
+|++.++ ....++. ++.+...-|+.+-++...+.|.++|==-|+. +...+++-+++.|.|+|+..
T Consensus 98 ~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl~aGa~iINDVsg~-~d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 98 DTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTCCEEEETTSS-SSTTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHhCCCEEEECCCC-CchHHHHHHHHhCCCEEEEC
Confidence 5666665 3333444 9999999999999999999999998766665 37789999999999999965
No 91
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.24 E-value=1.2 Score=43.04 Aligned_cols=115 Identities=14% Similarity=0.225 Sum_probs=75.5
Q ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC-CCC--------------
Q psy17999 105 KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS-AYP-------------- 169 (335)
Q Consensus 105 ~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s-~YP-------------- 169 (335)
+++||+++.....+.+++...++.+.+... +-+++|.++ +-+
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGa-----------------------dgi~v~ntt~~r~~~~~~~~~~~~gGl 275 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGI-----------------------DGLIVTNTTVSRPAGLQGALRSETGGL 275 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTC-----------------------CEEEECCCBSCCCTTCCCTTTTSSSEE
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCC-----------------------CEEEEeCCCcccccccccccccccCCc
Confidence 679999998766688899888888877322 344455433 111
Q ss_pred --CCccCCCchHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCC--CCCCCCCCCCHHHHHHHHH
Q psy17999 170 --TPYHDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSW--KGSDHASSLTPPELKALVT 244 (335)
Q Consensus 170 --~~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~--~G~Dh~~Sl~p~el~~lv~ 244 (335)
.+.....+..|..+++..+ ++||.-++--....-+..++..||+.+-- -+.+ . .|.-+.++.+
T Consensus 276 SG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v----gra~l~~--------gP~~~~~i~~ 343 (367)
T 3zwt_A 276 SGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL----YTALTFW--------GPPVVGKVKR 343 (367)
T ss_dssp EEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE----SHHHHHH--------CTHHHHHHHH
T ss_pred CCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE----CHHHHhc--------CcHHHHHHHH
Confidence 0112235688999999886 68996665555566677778899997662 1221 1 3567888888
Q ss_pred HHHHHHHHhC
Q psy17999 245 GIRDIEQSLG 254 (335)
Q Consensus 245 ~ir~~~~alG 254 (335)
.++..-...|
T Consensus 344 ~l~~~m~~~G 353 (367)
T 3zwt_A 344 ELEALLKEQG 353 (367)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 8877655555
No 92
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.19 E-value=0.52 Score=45.73 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEc---CCC----------CCCHHHHHHHHh----cCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIG---SGD----------SNNIPLIKYAAS----KQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIa---S~d----------~~n~~LL~~~a~----~gk 107 (335)
+......+.+.++.. ++.++. ++.+.+.+..+.+.|+|+++++ .+. ..++.+|..+++ .+.
T Consensus 133 ~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~i 212 (366)
T 4fo4_A 133 SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGI 212 (366)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred CHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCC
Confidence 344555566666665 888765 7899999999999999999994 111 234566666653 589
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||-+=|.. +..++.+|+.
T Consensus 213 PVIA~GGI~-~~~di~kala 231 (366)
T 4fo4_A 213 PVIADGGIR-FSGDISKAIA 231 (366)
T ss_dssp CEEEESCCC-SHHHHHHHHH
T ss_pred eEEEeCCCC-CHHHHHHHHH
Confidence 999999999 9999888765
No 93
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=93.14 E-value=0.41 Score=42.43 Aligned_cols=75 Identities=5% Similarity=-0.073 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChh-hHHHHHhCCCCEEEEcCC--CCCC-HHHHHHHHhcCCcEEEeCCCCCCHHH
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQV-SFDFLLSANVPFIKIGSG--DSNN-IPLIKYAASKQKPLIISTGMLPSIEH 121 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~-svd~l~~l~v~~~KIaS~--d~~n-~~LL~~~a~~gkPvilStG~~~tl~E 121 (335)
+..+..++|++.+ ..-+.+...+.|++ .++.+.+.|++++.++.. .... ..+++++.+.|+.++++.-.+ |..|
T Consensus 55 ~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~-t~~e 132 (230)
T 1rpx_A 55 IGPLVVDSLRPIT-DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPG-TPLT 132 (230)
T ss_dssp CCHHHHHHHGGGC-CSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTT-CCGG
T ss_pred cCHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCC-CCHH
Confidence 4456666666555 12223333444543 678888899999999887 5433 357777777788888887655 4444
Q ss_pred H
Q psy17999 122 V 122 (335)
Q Consensus 122 i 122 (335)
.
T Consensus 133 ~ 133 (230)
T 1rpx_A 133 A 133 (230)
T ss_dssp G
T ss_pred H
Confidence 3
No 94
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.13 E-value=0.51 Score=44.37 Aligned_cols=74 Identities=14% Similarity=-0.004 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC---------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHH
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG---------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHV 122 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~---------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei 122 (335)
.+.+.+++.|+.++..+.+.+.+..+.+.|+|++.+.+. +..++.++.++.+ .+.|||++-|.+ +.+++
T Consensus 109 ~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~-~~~~v 187 (328)
T 2gjl_A 109 EHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFA-DGRGL 187 (328)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCC-SHHHH
T ss_pred HHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCC-CHHHH
Confidence 455666777999999999988888889999999999331 2367889988875 489999999999 99999
Q ss_pred HHHHH
Q psy17999 123 DNIYT 127 (335)
Q Consensus 123 ~~Av~ 127 (335)
.+++.
T Consensus 188 ~~al~ 192 (328)
T 2gjl_A 188 VAALA 192 (328)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
No 95
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.06 E-value=0.44 Score=42.29 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=73.4
Q ss_pred ccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCC
Q psy17999 68 SAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPT 147 (335)
Q Consensus 68 tpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~ 147 (335)
++++.+.++.+.+.|.+++-.+. .+.++++.+.+.|.|+|+. .. |.+|+..|.+. |.
T Consensus 69 ~vl~~d~~~~A~~~GAd~v~~~~---~d~~v~~~~~~~g~~~i~G--~~-t~~e~~~A~~~---Ga-------------- 125 (207)
T 2yw3_A 69 TVRSPKEAEAALEAGAAFLVSPG---LLEEVAALAQARGVPYLPG--VL-TPTEVERALAL---GL-------------- 125 (207)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHTCCEEEE--EC-SHHHHHHHHHT---TC--------------
T ss_pred eEeeHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEec--CC-CHHHHHHHHHC---CC--------------
Confidence 46788999999999999996553 5689999999999999985 56 99999888642 32
Q ss_pred CCCCcccccCceEEeeecCCCCCCccCC-CchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 148 PYPTVKQYHSNLSILHCVSAYPTPYHDI-NLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 148 ~~~~~~~~~~~l~llHC~s~YP~~~~~~-nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
+++-+ ||++ .+ .+..+..++..+|++|+.=.+=-. ..-.....+.||+
T Consensus 126 ----------d~v~~-----fpa~--~~gG~~~lk~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~ 174 (207)
T 2yw3_A 126 ----------SALKF-----FPAE--PFQGVRVLRAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNL 174 (207)
T ss_dssp ----------CEEEE-----TTTT--TTTHHHHHHHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSB
T ss_pred ----------CEEEE-----ecCc--cccCHHHHHHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCc
Confidence 33322 6742 34 567788999999889873222111 2223334567776
No 96
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.01 E-value=0.95 Score=45.30 Aligned_cols=118 Identities=13% Similarity=0.166 Sum_probs=78.7
Q ss_pred hhHHHHHhCCCCEEEEc--CCCCCCH-HHHHHHHhcCCcEE--EeC--CCCCCHHHHHHHHHHHHh-cCCCCceeecccC
Q psy17999 73 VSFDFLLSANVPFIKIG--SGDSNNI-PLIKYAASKQKPLI--IST--GMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSA 144 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIa--S~d~~n~-~LL~~~a~~gkPvi--lSt--G~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g 144 (335)
..++.+.+.|++.+-|- ..++.|. +.++++.+.|+.|. ++. |..-+++.+.+.++.+.. |.. .|-+|+..
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad--~I~l~DT~ 181 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVD--SIALKDMA 181 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCS--EEEEEETT
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCC--EEEEcCCC
Confidence 44677778899987765 3455444 44455556788874 331 322378888888887777 654 55566542
Q ss_pred CCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 145 YPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 145 ~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
.+=+|..-.+ .+..|++.+ ++|||+=.|.. | ...+++|+..||++|+-
T Consensus 182 ----------------------G~~~P~~v~~--lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ 232 (464)
T 2nx9_A 182 ----------------------GILTPYAAEE--LVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRVDT 232 (464)
T ss_dssp ----------------------SCCCHHHHHH--HHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred ----------------------CCcCHHHHHH--HHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEEEE
Confidence 3333443333 377889999 89999988864 4 55679999999999984
No 97
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=92.99 E-value=0.19 Score=47.22 Aligned_cols=75 Identities=8% Similarity=0.174 Sum_probs=61.3
Q ss_pred HHHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
....+.++++|+.-..+ +. ++|.+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..+
T Consensus 49 ~~a~~~a~~~g~~~~~~-----d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~ 123 (390)
T 4h3v_A 49 EAVRAAAGKLGWSTTET-----DWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAA 123 (390)
T ss_dssp HHHHHHHHHHTCSEEES-----CHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccC-----CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHH
Confidence 35567788999864322 33 4455667999999999999999999999999999999999999999998877654
Q ss_pred h
Q psy17999 131 Q 131 (335)
Q Consensus 131 ~ 131 (335)
.
T Consensus 124 ~ 124 (390)
T 4h3v_A 124 K 124 (390)
T ss_dssp H
T ss_pred H
Confidence 4
No 98
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=92.96 E-value=0.59 Score=41.66 Aligned_cols=133 Identities=12% Similarity=0.179 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-CCcEEEeCCC-------------
Q psy17999 52 VMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-QKPLIISTGM------------- 115 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-gkPvilStG~------------- 115 (335)
..+.+.++..+++++.- +.+++.++.+.+.|++.+-+++..+.|..++.++.+. |.-++++.-.
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~ 144 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRD 144 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCC
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccC
Confidence 66778888889998874 4677889999999999999999999998888776543 4334332210
Q ss_pred CCCHHHH-HHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec
Q psy17999 116 LPSIEHV-DNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 116 ~~tl~Ei-~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
+.+..|+ ..+.+ .|- +.++.|.++.= -...-.|+..+..+++.. ++||.-
T Consensus 145 ~~~~~e~~~~~~~---~G~------------------------~~i~~~~~~~~-~~~~g~~~~~~~~i~~~~-~ipvia 195 (244)
T 1vzw_A 145 GGDLYETLDRLNK---EGC------------------------ARYVVTDIAKD-GTLQGPNLELLKNVCAAT-DRPVVA 195 (244)
T ss_dssp CCBHHHHHHHHHH---TTC------------------------CCEEEEEC--------CCCHHHHHHHHHTC-SSCEEE
T ss_pred CCCHHHHHHHHHh---CCC------------------------CEEEEeccCcc-cccCCCCHHHHHHHHHhc-CCCEEE
Confidence 0023333 22222 132 45566655421 111346899999999887 899965
Q ss_pred CCCCCChHHHHHHHHc---CCc
Q psy17999 195 SGHENGVHVCYAAVAM---GAQ 213 (335)
Q Consensus 195 SdHt~g~~~~~aAval---GA~ 213 (335)
++--....-...+..+ ||+
T Consensus 196 ~GGI~~~~d~~~~~~~~~~Gad 217 (244)
T 1vzw_A 196 SGGVSSLDDLRAIAGLVPAGVE 217 (244)
T ss_dssp ESCCCSHHHHHHHHTTGGGTEE
T ss_pred ECCCCCHHHHHHHHhhccCCCc
Confidence 5444433444456667 887
No 99
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=92.89 E-value=1.5 Score=43.67 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=43.5
Q ss_pred cCCceEeccCChhhHHHHHh--CCCCE-EEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 61 VDIMFTASAMDQVSFDFLLS--ANVPF-IKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 61 ~Gi~f~stpfd~~svd~l~~--l~v~~-~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
.++.+...-|..+.++...+ .|+++ |===|+ ..+..+++-+|+.|.|+|+.-
T Consensus 268 ~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg-~~d~~m~~v~a~~g~~vVlMh 322 (442)
T 3mcm_A 268 YKPLVSIDTRKLEVMQKILAKHHDIIWMINDVEC-NNIEQKAQLIAKYNKKYVIIH 322 (442)
T ss_dssp SCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCC-TTHHHHHHHHHHHTCEEEEEC
T ss_pred CCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCC-CCChHHHHHHHHhCCeEEEEC
Confidence 38999999999999999998 89988 755555 456688999999999999953
No 100
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.87 E-value=0.11 Score=47.79 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCC----HHHHHHHHh---c---CCcEEEeCCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNN----IPLIKYAAS---K---QKPLIISTGM 115 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n----~~LL~~~a~---~---gkPvilStG~ 115 (335)
|+ +++++|.++++++|+.++..+.+.+.++.+.+++.+++=|...+++. +..++++.+ . +.|+|-+.|.
T Consensus 139 l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI 217 (254)
T 1vc4_A 139 LG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGY 217 (254)
T ss_dssp HG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCC
T ss_pred hH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCC
Confidence 45 78999999999999999999999999998899999999998876553 334444333 1 6899999999
Q ss_pred CCCHHHHHHHH
Q psy17999 116 LPSIEHVDNIY 126 (335)
Q Consensus 116 ~~tl~Ei~~Av 126 (335)
+ |.+++....
T Consensus 218 ~-s~~dv~~l~ 227 (254)
T 1vc4_A 218 S-RKEELKALE 227 (254)
T ss_dssp C-SHHHHHTTT
T ss_pred C-CHHHHHHHH
Confidence 9 999988753
No 101
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=92.81 E-value=0.58 Score=41.13 Aligned_cols=136 Identities=16% Similarity=0.130 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-CCc-E-------------EEe
Q psy17999 50 EYVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-QKP-L-------------IIS 112 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-gkP-v-------------ilS 112 (335)
.+..+.+.++..+++++.. +.+.+.++.+.+.|++++-|++..+.+..++.++.+. +.+ + .+.
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~ 144 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVY 144 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEE
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEE
Confidence 4556777777888887754 5677888888889999999999888888877766543 421 2 222
Q ss_pred CCCC-----CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHC
Q psy17999 113 TGML-----PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRY 187 (335)
Q Consensus 113 tG~~-----~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~f 187 (335)
+..+ .+..|+... +..... +.+++|..+.--+. ...++..+..+++..
T Consensus 145 ~~~~~~~~~~~~~e~~~~---~~~~G~-----------------------d~i~~~~~~~~g~~-~~~~~~~i~~l~~~~ 197 (253)
T 1h5y_A 145 VKGGREATGLDAVKWAKE---VEELGA-----------------------GEILLTSIDRDGTG-LGYDVELIRRVADSV 197 (253)
T ss_dssp ETTTTEEEEEEHHHHHHH---HHHHTC-----------------------SEEEEEETTTTTTC-SCCCHHHHHHHHHHC
T ss_pred EeCCeecCCCCHHHHHHH---HHhCCC-----------------------CEEEEecccCCCCc-CcCCHHHHHHHHHhc
Confidence 2211 133333222 222122 56667765432121 235888999999887
Q ss_pred CCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 188 PDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 188 p~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
++||..++=-....-...+...||+
T Consensus 198 -~~pvia~GGi~~~~~~~~~~~~Ga~ 222 (253)
T 1h5y_A 198 -RIPVIASGGAGRVEHFYEAAAAGAD 222 (253)
T ss_dssp -SSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred -CCCEEEeCCCCCHHHHHHHHHcCCc
Confidence 8998554322222223334478998
No 102
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.77 E-value=0.86 Score=41.02 Aligned_cols=134 Identities=14% Similarity=0.063 Sum_probs=79.5
Q ss_pred HHHHHHHHHHcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCC-C--CHHHHHHHHhc-C---CcEEEeCCC------
Q psy17999 51 YVMLQQCADQVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDS-N--NIPLIKYAASK-Q---KPLIISTGM------ 115 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~-~--n~~LL~~~a~~-g---kPvilStG~------ 115 (335)
+..+.+.++..+++++..- .+.+.++.+.+.|++.+-+++..+ . +...++++.+. + ..++++.-.
T Consensus 63 ~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~ 142 (266)
T 2w6r_A 63 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGE 142 (266)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTE
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCC
Confidence 5566677788899999854 355778888889999999999999 5 78888887654 3 234333221
Q ss_pred -------------CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 116 -------------LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 116 -------------~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
. +..|+...++. .|. ..+++|.++.--+. ..+|+..+..
T Consensus 143 ~~v~~~g~~~~~~~-~~~e~~~~~~~--~G~------------------------~~i~~t~~~~~g~~-~g~~~~~i~~ 194 (266)
T 2w6r_A 143 FMVFTHSGKKNTGI-LLRDWVVEVEK--RGA------------------------GEILLTSIDRDGTK-SGYDTEMIRF 194 (266)
T ss_dssp EEEEETTTTEEEEE-EHHHHHHHHHH--TTC------------------------SEEEEEETTTTTTC-SCCCHHHHHH
T ss_pred EEEEECCCceecch-hHHHHHHHHHH--cCC------------------------CEEEEEeecCCCCc-CCCCHHHHHH
Confidence 1 34454332221 132 34455544422221 2357889999
Q ss_pred HHHHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 183 LRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 183 L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
+++.. ++||.-++=-....-...+...||+
T Consensus 195 l~~~~-~ipvia~GGI~~~ed~~~~~~~Gad 224 (266)
T 2w6r_A 195 VRPLT-TLPIIASGGAGKMEHFLEAFLAGAD 224 (266)
T ss_dssp HGGGC-CSCEEEESCCCSHHHHHHHHHHTCS
T ss_pred HHHHc-CCCEEEeCCCCCHHHHHHHHHcCCH
Confidence 99887 8998554433322333334467887
No 103
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=92.75 E-value=0.35 Score=46.56 Aligned_cols=77 Identities=9% Similarity=0.066 Sum_probs=63.5
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
....+.++++|+.-..+ +--++|.+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..++
T Consensus 70 ~~a~~~a~~~~~~~~y~----d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~ 145 (412)
T 4gqa_A 70 AMAERHAAKLGAEKAYG----DWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARR 145 (412)
T ss_dssp HHHHHHHHHHTCSEEES----SHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEC----CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHH
Confidence 45667788999863222 12245666789999999999999999999999999999999999999999999998776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 146 ~ 146 (412)
T 4gqa_A 146 A 146 (412)
T ss_dssp H
T ss_pred h
Confidence 3
No 104
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.75 E-value=0.89 Score=40.55 Aligned_cols=136 Identities=19% Similarity=0.183 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-CC-c--EEEeCC--------
Q psy17999 49 EEYVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-QK-P--LIISTG-------- 114 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-gk-P--vilStG-------- 114 (335)
..+..+.+.++..+++++.. ..+++.++.+.+.|+|.+-+++..+.|..++.++.+. |. . +-++..
T Consensus 61 ~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v 140 (253)
T 1thf_D 61 TMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMV 140 (253)
T ss_dssp HHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEE
T ss_pred ccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEE
Confidence 34667788888889998874 4566888888889999999999999998877776543 42 2 333331
Q ss_pred ---CC-----CCHHH-HHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH
Q psy17999 115 ---ML-----PSIEH-VDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS 185 (335)
Q Consensus 115 ---~~-----~tl~E-i~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~ 185 (335)
.. .+..| ++.+.+ .|- ..+++|.++.--+ ....|+..+..+++
T Consensus 141 ~~~g~~~~~~~~~~e~~~~~~~---~G~------------------------~~i~~~~~~~~g~-~~g~~~~~~~~l~~ 192 (253)
T 1thf_D 141 FTYSGKKNTGILLRDWVVEVEK---RGA------------------------GEILLTSIDRDGT-KSGYDTEMIRFVRP 192 (253)
T ss_dssp EETTTTEEEEEEHHHHHHHHHH---TTC------------------------SEEEEEETTTTTS-CSCCCHHHHHHHGG
T ss_pred EECCCccccCCCHHHHHHHHHH---CCC------------------------CEEEEEeccCCCC-CCCCCHHHHHHHHH
Confidence 00 02333 333322 132 4456666542211 13468889999998
Q ss_pred HCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 186 RYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 186 ~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.. ++||.-++--....-...+...||+
T Consensus 193 ~~-~ipvia~GGI~~~~d~~~~~~~Gad 219 (253)
T 1thf_D 193 LT-TLPIIASGGAGKMEHFLEAFLAGAD 219 (253)
T ss_dssp GC-CSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred hc-CCCEEEECCCCCHHHHHHHHHcCCh
Confidence 87 8998655433333333334578988
No 105
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.54 E-value=3.1 Score=38.54 Aligned_cols=131 Identities=9% Similarity=0.031 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHcCCceEeccC--ChhhHHHHHhCCCCEEEEcCCCCCCHH---HHHHHHhcCCcEEEeCCCCCCHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTASAM--DQVSFDFLLSANVPFIKIGSGDSNNIP---LIKYAASKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stpf--d~~svd~l~~l~v~~~KIaS~d~~n~~---LL~~~a~~gkPvilStG~~~tl~Ei~~ 124 (335)
.+..|.+..+..+++++.--| |+..++.+...|+|.+-++..++.+-. |++.+.+.|..++++. + |.+|++.
T Consensus 101 s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev--~-t~ee~~~ 177 (272)
T 3qja_A 101 SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEV--H-TEQEADR 177 (272)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE--S-SHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEc--C-CHHHHHH
Confidence 355666777778888876554 455688889999999999877776543 3555666799999887 4 8999998
Q ss_pred HHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC-CCCeecCCCCCChHH
Q psy17999 125 IYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP-DIPIGYSGHENGVHV 203 (335)
Q Consensus 125 Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~ 203 (335)
|.+. |. +++-. ++.....-.+|+..+..|.+..| ++||.-.+--....-
T Consensus 178 A~~~---Ga------------------------d~IGv---~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~ed 227 (272)
T 3qja_A 178 ALKA---GA------------------------KVIGV---NARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTAD 227 (272)
T ss_dssp HHHH---TC------------------------SEEEE---ESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHH
T ss_pred HHHC---CC------------------------CEEEE---CCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHH
Confidence 8753 32 22222 22222223467888888988776 677744333333444
Q ss_pred HHHHHHcCCc
Q psy17999 204 CYAAVAMGAQ 213 (335)
Q Consensus 204 ~~aAvalGA~ 213 (335)
......+||+
T Consensus 228 v~~l~~~Gad 237 (272)
T 3qja_A 228 LLAYAGAGAD 237 (272)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHcCCC
Confidence 5566788988
No 106
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=92.52 E-value=1.2 Score=41.59 Aligned_cols=96 Identities=21% Similarity=0.180 Sum_probs=60.6
Q ss_pred HHHHHHhcCCcEEEe---CCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCcc
Q psy17999 98 LIKYAASKQKPLIIS---TGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYH 173 (335)
Q Consensus 98 LL~~~a~~gkPvilS---tG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~ 173 (335)
.++++-+.|..|.++ .|.+ +++.+.+.++.+.. |.. .|-||+. ..+-+|..
T Consensus 126 ~v~~a~~~g~~v~~~~~d~~~~-~~~~~~~~~~~~~~~G~~--~i~l~DT----------------------~G~~~P~~ 180 (293)
T 3ewb_X 126 HISYARQKFDVVQFSPEDATRS-DRAFLIEAVQTAIDAGAT--VINIPDT----------------------VGYTNPTE 180 (293)
T ss_dssp HHHHHHTTCSCEEEEEETGGGS-CHHHHHHHHHHHHHTTCC--EEEEECS----------------------SSCCCHHH
T ss_pred HHHHHHhCCCEEEEEeccCCCC-CHHHHHHHHHHHHHcCCC--EEEecCC----------------------CCCCCHHH
Confidence 344444456666665 2345 77777777666665 544 4444443 23334443
Q ss_pred CCCchHHHHHHHHCCC---CCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 174 DINLNVIHTLRSRYPD---IPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 174 ~~nL~~i~~L~~~fp~---~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
-. ..+..+++.+|+ +|+|+=.|.. | ..-+++|+..||+.|+ -|+.
T Consensus 181 v~--~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd--~sv~ 231 (293)
T 3ewb_X 181 FG--QLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVE--GTIN 231 (293)
T ss_dssp HH--HHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEE--EBGG
T ss_pred HH--HHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEE--eecc
Confidence 23 347788999985 6799877764 4 6667999999999998 4543
No 107
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=92.36 E-value=1.5 Score=42.47 Aligned_cols=172 Identities=17% Similarity=0.287 Sum_probs=97.0
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccC------ChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEE-EeCCCC
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAM------DQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLI-ISTGML 116 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpf------d~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvi-lStG~~ 116 (335)
..|+.++-.++.+...+.|+..+---| +.+.++.+.+++.. .++....-.+..=++.+.+.|.++| +....+
T Consensus 20 ~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~-~~v~~~~r~~~~di~~a~~~g~~~v~i~~~~s 98 (382)
T 2ztj_A 20 ANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLK-AKVVTHIQCRLDAAKVAVETGVQGIDLLFGTS 98 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCS-SEEEEEEESCHHHHHHHHHTTCSEEEEEECC-
T ss_pred CCcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCC-cEEEEEcccChhhHHHHHHcCCCEEEEEeccC
Confidence 458889989999999999988775433 34456666666544 3444333234455777777887733 222222
Q ss_pred --------CCH----HHHHHHHHHHHhcCCCCceeeccc-CCCCCCCC-------cccccCceEEeee-cCCCCCCccCC
Q psy17999 117 --------PSI----EHVDNIYTTVKQYHSNLSILHCVS-AYPTPYPT-------VKQYHSNLSILHC-VSAYPTPYHDI 175 (335)
Q Consensus 117 --------~tl----~Ei~~Av~~i~~g~~~~~~~~c~~-g~~~~~~~-------~~~~~~~l~llHC-~s~YP~~~~~~ 175 (335)
.|. +.+..++++.++.+...++-+|-+ +.++...- +.+. -+ .|--| +..|=+|.+-.
T Consensus 99 ~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~-~i~l~DT~G~~~P~~~~ 176 (382)
T 2ztj_A 99 KYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VD-RVGLADTVGVATPRQVY 176 (382)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CS-EEEEEETTSCCCHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cC-EEEecCCCCCCCHHHHH
Confidence 123 445566666666221124444422 22211000 0011 01 12222 44555555444
Q ss_pred CchHHHHHHHHC-CCCCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 176 NLNVIHTLRSRY-PDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 176 nL~~i~~L~~~f-p~~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
++ +..|++.+ |++||++=.|.. | ...+++|+..||+.|+ .|+.
T Consensus 177 ~l--v~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd--~tv~ 223 (382)
T 2ztj_A 177 AL--VREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVD--TTIL 223 (382)
T ss_dssp HH--HHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE--EBGG
T ss_pred HH--HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE--Eccc
Confidence 43 77888874 589999977754 4 6667999999999999 4554
No 108
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=92.33 E-value=2.5 Score=39.81 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHH---cCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 49 EEYVMLQQCADQ---VDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 49 e~~~~L~~~~~~---~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
|++.++....+. .++.+...-|+.+-++...+.|.+++==-|+. ++..+++-+++.|.|+|+..
T Consensus 87 eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh 153 (294)
T 2dqw_A 87 EEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMH 153 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEc
Confidence 444444333333 39999999999999999999999998777777 88899999999999999965
No 109
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=92.30 E-value=0.77 Score=40.74 Aligned_cols=132 Identities=13% Similarity=0.176 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-CCcEEEeCC--------------
Q psy17999 52 VMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-QKPLIISTG-------------- 114 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-gkPvilStG-------------- 114 (335)
..+.+.++..+++++.- +.+++.++.+.+.|++.+-+++..+.|..++.++.+. |.-++++.-
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g 143 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRG 143 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGG
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECC
Confidence 66777788889998874 4677889999999999999999999998888776553 322332211
Q ss_pred C-----CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCC
Q psy17999 115 M-----LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPD 189 (335)
Q Consensus 115 ~-----~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~ 189 (335)
. . ..+.++.+.+ .|- ..+++|..+. .....-.|+..+..+++.. +
T Consensus 144 ~~~~~~~-~~e~~~~~~~---~G~------------------------~~i~~~~~~~-~~~~~g~~~~~~~~l~~~~-~ 193 (244)
T 2y88_A 144 WETDGGD-LWDVLERLDS---EGC------------------------SRFVVTDITK-DGTLGGPNLDLLAGVADRT-D 193 (244)
T ss_dssp GTEEEEE-HHHHHHHHHH---TTC------------------------CCEEEEETTT-TTTTSCCCHHHHHHHHTTC-S
T ss_pred ccCCCCC-HHHHHHHHHh---CCC------------------------CEEEEEecCC-ccccCCCCHHHHHHHHHhC-C
Confidence 1 1 1233333222 132 4556666542 0111235899999999876 8
Q ss_pred CCeecCCCCCChHHHHHHHHc---CCc
Q psy17999 190 IPIGYSGHENGVHVCYAAVAM---GAQ 213 (335)
Q Consensus 190 ~pVG~SdHt~g~~~~~aAval---GA~ 213 (335)
+||..++--....-...+..+ ||+
T Consensus 194 ipvia~GGI~~~~d~~~~~~~~~~Gad 220 (244)
T 2y88_A 194 APVIASGGVSSLDDLRAIATLTHRGVE 220 (244)
T ss_dssp SCEEEESCCCSHHHHHHHHTTGGGTEE
T ss_pred CCEEEECCCCCHHHHHHHHhhccCCCC
Confidence 999766544444444445666 887
No 110
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.25 E-value=0.81 Score=44.40 Aligned_cols=77 Identities=14% Similarity=0.080 Sum_probs=56.7
Q ss_pred HHHHHHHHHHH-c-CCceEe-ccCChhhHHHHHhCCCCEEEEcC-------------CCCCCHHHHHHHHh----cCCcE
Q psy17999 50 EYVMLQQCADQ-V-DIMFTA-SAMDQVSFDFLLSANVPFIKIGS-------------GDSNNIPLIKYAAS----KQKPL 109 (335)
Q Consensus 50 ~~~~L~~~~~~-~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS-------------~d~~n~~LL~~~a~----~gkPv 109 (335)
.+.++.+.+++ . |++++. .+.+.+.+..+.+.|+|++.++. ...-++..|..+.+ .+.||
T Consensus 180 ~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipV 259 (404)
T 1eep_A 180 RIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICI 259 (404)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceE
Confidence 33444444444 4 899885 88999999999999999999931 11224555665554 58999
Q ss_pred EEeCCCCCCHHHHHHHHH
Q psy17999 110 IISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 110 ilStG~~~tl~Ei~~Av~ 127 (335)
|.+-|.. +.+++.+++.
T Consensus 260 ia~GGI~-~~~d~~~ala 276 (404)
T 1eep_A 260 IADGGIR-FSGDVVKAIA 276 (404)
T ss_dssp EEESCCC-SHHHHHHHHH
T ss_pred EEECCCC-CHHHHHHHHH
Confidence 9999999 9999999876
No 111
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=92.25 E-value=0.72 Score=44.74 Aligned_cols=76 Identities=14% Similarity=0.203 Sum_probs=56.9
Q ss_pred HHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHHhcCCcEEEeCCC
Q psy17999 51 YVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAASKQKPLIISTGM 115 (335)
Q Consensus 51 ~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a~~gkPvilStG~ 115 (335)
+..+....+.. ++.++. .+.+.+.+..+.+.|+|+++|+..- ...++.|.++++.-.|||..-|.
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI 208 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGI 208 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCC
T ss_pred HHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCC
Confidence 33444333343 899999 7999999999999999999995331 22456666666554599999999
Q ss_pred CCCHHHHHHHHH
Q psy17999 116 LPSIEHVDNIYT 127 (335)
Q Consensus 116 ~~tl~Ei~~Av~ 127 (335)
. +..++.+|+.
T Consensus 209 ~-~~~di~kALa 219 (361)
T 3r2g_A 209 K-TSGDIVKALA 219 (361)
T ss_dssp C-SHHHHHHHHH
T ss_pred C-CHHHHHHHHH
Confidence 9 9999998876
No 112
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.21 E-value=0.41 Score=45.24 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=60.0
Q ss_pred HHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC-------CCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHH
Q psy17999 54 LQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS-------GDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 54 L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS-------~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~A 125 (335)
+.+.+++.|+.++..+.+.+.+..+.+.|+|++.+.+ +...++.+++++.+ .+.|||.+-|.. +.+++..+
T Consensus 102 ~i~~l~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~-~~~~~~~a 180 (332)
T 2z6i_A 102 YMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA-DGEGAAAG 180 (332)
T ss_dssp THHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC-CHHHHHHH
Confidence 4455566799999999888888899999999999943 24677899988875 589999999999 99998887
Q ss_pred HH
Q psy17999 126 YT 127 (335)
Q Consensus 126 v~ 127 (335)
+.
T Consensus 181 l~ 182 (332)
T 2z6i_A 181 FM 182 (332)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 113
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.20 E-value=2.5 Score=40.20 Aligned_cols=54 Identities=4% Similarity=0.015 Sum_probs=45.8
Q ss_pred HHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 59 DQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 59 ~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
+..++.+...-|+.+.++...+.|++++==-|+.- ...+++-+++.|.|+|+..
T Consensus 102 ~~~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~-~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 102 KRFPQLISVDTSRPRVMREAVNTGADMINDQRALQ-LDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp HHCCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC-STTHHHHHHHHTCCEEEEC
T ss_pred hhCCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCeEEEEC
Confidence 44699999999999999999999999887666654 4488999999999999975
No 114
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.16 E-value=0.29 Score=42.52 Aligned_cols=65 Identities=9% Similarity=0.162 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc--CCcEEEeCCCC
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK--QKPLIISTGML 116 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~--gkPvilStG~~ 116 (335)
.++.++|++.|+.++..+++...+..+.++|++++|+-..+.....+++++.+. +.||+..-|.+
T Consensus 94 ~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia~GGI~ 160 (205)
T 1wa3_A 94 EEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVN 160 (205)
T ss_dssp HHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEEBSSCC
T ss_pred HHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEEcCCCC
Confidence 457788888999999888888888889999999999876544567788887763 67877776765
No 115
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=92.07 E-value=0.68 Score=43.98 Aligned_cols=74 Identities=11% Similarity=0.063 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.-.. .+. +++.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++
T Consensus 58 ~a~~~a~~~~~~~~~-----~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 58 KVEALAKRFNIARWT-----TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp HHHHHHHHTTCCCEE-----SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 455677888985222 233 45556679999999999999999999999999999999998899999999888776
No 116
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=91.99 E-value=0.49 Score=45.97 Aligned_cols=78 Identities=5% Similarity=0.101 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCceEeccCChhhH-HHHHh-----CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSF-DFLLS-----ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~sv-d~l~~-----l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~A 125 (335)
....+.++++|+.-. ..|+ +. +++.+ -++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.
T Consensus 77 ~~a~~~a~~~g~~~~-~~~~--~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l 153 (417)
T 3v5n_A 77 EKAEASGRELGLDPS-RVYS--DFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKL 153 (417)
T ss_dssp HHHHHHHHHHTCCGG-GBCS--CHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHH
T ss_pred HHHHHHHHHcCCCcc-cccC--CHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHH
Confidence 456677888898510 1121 23 34444 469999999999999999999999999999999998899999999
Q ss_pred HHHHHhc
Q psy17999 126 YTTVKQY 132 (335)
Q Consensus 126 v~~i~~g 132 (335)
++..++.
T Consensus 154 ~~~a~~~ 160 (417)
T 3v5n_A 154 KKAADES 160 (417)
T ss_dssp HHHHHHC
T ss_pred HHHHHHc
Confidence 9887763
No 117
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=91.92 E-value=4.7 Score=38.28 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=85.6
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCC----------CCC-----------------H
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGD----------SNN-----------------I 96 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d----------~~n-----------------~ 96 (335)
-+|+.++..++.+.=. +++..+.+.|.|.+.|..+. .+| .
T Consensus 132 ~~mt~~eI~~ii~~f~-------------~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~ 198 (340)
T 3gr7_A 132 KEMTKADIEETVQAFQ-------------NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLG 198 (340)
T ss_dssp EECCHHHHHHHHHHHH-------------HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH-------------HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHH
Confidence 3689888887765322 34556677889999887552 222 3
Q ss_pred HHHHHHHh-cCCcEEEeCCCC------CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC--C
Q psy17999 97 PLIKYAAS-KQKPLIISTGML------PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS--A 167 (335)
Q Consensus 97 ~LL~~~a~-~gkPvilStG~~------~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s--~ 167 (335)
.+++++.+ .+.||.+..... .+.+|....++.+...+- ..+|+++ .
T Consensus 199 eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gv-------------------------d~i~vs~g~~ 253 (340)
T 3gr7_A 199 EVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGV-------------------------DLVDVSSGAI 253 (340)
T ss_dssp HHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTC-------------------------CEEEEECCCS
T ss_pred HHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCC-------------------------CEEEEecCCc
Confidence 45555544 388998875532 267788877777776222 2334332 2
Q ss_pred CCCC---ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 168 YPTP---YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 168 YP~~---~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
++.+ ....++..+..+|+.+ ++||.-.+--.....+..++..| |+.|-
T Consensus 254 ~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~ 305 (340)
T 3gr7_A 254 VPARMNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVF 305 (340)
T ss_dssp SCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred cCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEE
Confidence 2211 2346888899999999 89996665544567777888888 88554
No 118
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=91.91 E-value=0.9 Score=43.76 Aligned_cols=76 Identities=7% Similarity=0.042 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC-------CCCCHHHHHHHHh-c--CCcEEEeCCCCCCH
Q psy17999 51 YVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG-------DSNNIPLIKYAAS-K--QKPLIISTGMLPSI 119 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~-------d~~n~~LL~~~a~-~--gkPvilStG~~~tl 119 (335)
|..+.+.++..+++++. .+.+.+.+..+.+.|+|+++|... -..++..|.++.+ . +.|||.+-|.. +.
T Consensus 214 ~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~-~~ 292 (370)
T 1gox_A 214 WKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR-RG 292 (370)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC-SH
T ss_pred HHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC-CH
Confidence 45577777788999988 788999999999999999999541 1245667777766 3 68999999999 99
Q ss_pred HHHHHHHH
Q psy17999 120 EHVDNIYT 127 (335)
Q Consensus 120 ~Ei~~Av~ 127 (335)
+++.+++.
T Consensus 293 ~D~~k~l~ 300 (370)
T 1gox_A 293 TDVFKALA 300 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 119
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=91.86 E-value=0.66 Score=41.10 Aligned_cols=76 Identities=12% Similarity=0.090 Sum_probs=60.5
Q ss_pred HHHHHHHHHHc--CCceEeccCChhhHHHHHhCCCCEE--EEcCC-------CCCCHHHHHHHHhcCCcEEEeCCCCCCH
Q psy17999 51 YVMLQQCADQV--DIMFTASAMDQVSFDFLLSANVPFI--KIGSG-------DSNNIPLIKYAASKQKPLIISTGMLPSI 119 (335)
Q Consensus 51 ~~~L~~~~~~~--Gi~f~stpfd~~svd~l~~l~v~~~--KIaS~-------d~~n~~LL~~~a~~gkPvilStG~~~tl 119 (335)
..++.+.+++. |+.++.++.+.+.+..+.+.|+|++ .+.+. .-.++.+++++.+.+.||+.+-|.. |.
T Consensus 120 ~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~-s~ 198 (234)
T 1yxy_A 120 IASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIH-SP 198 (234)
T ss_dssp HHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESCCC-SH
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhCCCCEEEECCCC-CH
Confidence 45666666666 8999999999999988899999999 45432 2346788999887689999999999 89
Q ss_pred HHHHHHHH
Q psy17999 120 EHVDNIYT 127 (335)
Q Consensus 120 ~Ei~~Av~ 127 (335)
+++..+++
T Consensus 199 ~~~~~~~~ 206 (234)
T 1yxy_A 199 EEAKKIND 206 (234)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99887654
No 120
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.71 E-value=4.7 Score=36.35 Aligned_cols=143 Identities=10% Similarity=0.020 Sum_probs=73.2
Q ss_pred CCHHHHHHHHHHHH-HcCCceEecc-CCh---hhHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEeCCCCCCH
Q psy17999 46 FSQEEYVMLQQCAD-QVDIMFTASA-MDQ---VSFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIISTGMLPSI 119 (335)
Q Consensus 46 l~~e~~~~L~~~~~-~~Gi~f~stp-fd~---~svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilStG~~~tl 119 (335)
++.++...+.+..+ ..+++++.-. +++ ..++.+.+.|++.+-++...+.. ..+++.+.+.|.++++-....-+.
T Consensus 77 ~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~ 156 (262)
T 1rd5_A 77 TTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPE 156 (262)
T ss_dssp CCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCH
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCH
Confidence 55555444444444 4578876532 221 23455888999988886433333 356666667787766554443144
Q ss_pred HHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCC
Q psy17999 120 EHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN 199 (335)
Q Consensus 120 ~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~ 199 (335)
+.+..+... + . .++.|.+. -.++...++.....+..+..+++.. ++||...+--.
T Consensus 157 e~~~~~~~~---~-~--g~v~~~s~------------------~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~ 211 (262)
T 1rd5_A 157 DRMKEITKA---S-E--GFVYLVSV------------------NGVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFGIS 211 (262)
T ss_dssp HHHHHHHHH---C-C--SCEEEECS------------------SCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESCCC
T ss_pred HHHHHHHhc---C-C--CeEEEecC------------------CCCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECCcC
Confidence 444443321 1 1 11122110 0011111122222345788889887 88985433222
Q ss_pred ChHHHHHHHHcCCc
Q psy17999 200 GVHVCYAAVAMGAQ 213 (335)
Q Consensus 200 g~~~~~aAvalGA~ 213 (335)
.......+..+||+
T Consensus 212 ~~e~~~~~~~~GAd 225 (262)
T 1rd5_A 212 KPEHVKQIAQWGAD 225 (262)
T ss_dssp SHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHcCCC
Confidence 24445556678998
No 121
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=91.67 E-value=0.5 Score=47.32 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=58.7
Q ss_pred HHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEcC--C--------------CCCCHHHHHHHHh-cCCcEEE
Q psy17999 51 YVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIGS--G--------------DSNNIPLIKYAAS-KQKPLII 111 (335)
Q Consensus 51 ~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS--~--------------d~~n~~LL~~~a~-~gkPvil 111 (335)
+..+.+..+.. +++++. ++.+.+.+..+.+.|+|+++++. + ...++.++.++++ .+.|||.
T Consensus 284 ~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 284 IAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 44444444554 899987 78999999999999999999943 1 1234677777766 4899999
Q ss_pred eCCCCCCHHHHHHHHH
Q psy17999 112 STGMLPSIEHVDNIYT 127 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~ 127 (335)
+-|.. +..++.+|+.
T Consensus 364 ~GGI~-~~~di~kala 378 (514)
T 1jcn_A 364 DGGIQ-TVGHVVKALA 378 (514)
T ss_dssp ESCCC-SHHHHHHHHH
T ss_pred ECCCC-CHHHHHHHHH
Confidence 99999 9999998865
No 122
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.65 E-value=1.4 Score=41.49 Aligned_cols=88 Identities=15% Similarity=0.136 Sum_probs=55.5
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCC----------------CC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA----------------YP 169 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~----------------YP 169 (335)
++||+++.....+.+|+.+.++.+...+. +.+.+|.++. |.
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gv-----------------------d~i~vsn~~~~~~~~~~~~~~~~~gg~~ 267 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNI-----------------------DGVIATNTTLDRSLVQGMKNCDQTGGLS 267 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTC-----------------------SEEEECCCBCCCTTSTTSTTTTCSSEEE
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCC-----------------------cEEEEeCCcccccccccccccccCCCcC
Confidence 79999997654578888888887776222 3333333221 00
Q ss_pred CC-ccCCCchHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEE
Q psy17999 170 TP-YHDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIE 216 (335)
Q Consensus 170 ~~-~~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIE 216 (335)
-+ .....+..+..+++..+ ++||.-++--....-+..++++||+.+-
T Consensus 268 g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 268 GRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQ 316 (336)
T ss_dssp EGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEE
Confidence 00 01134567788888765 6899666555556667778889999775
No 123
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=91.65 E-value=1 Score=43.72 Aligned_cols=53 Identities=26% Similarity=0.463 Sum_probs=38.4
Q ss_pred CCCCCCccCCCchHHHHHHHHCCC---CCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 166 SAYPTPYHDINLNVIHTLRSRYPD---IPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 166 s~YP~~~~~~nL~~i~~L~~~fp~---~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
..|=+|.+-.++ +..|++.+|+ +++++=.|.. | ..-+++|+..||+.|+ .|+.
T Consensus 180 ~G~~~P~~~~~l--v~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd--~tv~ 238 (370)
T 3rmj_A 180 VGYSIPYKTEEF--FRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVE--CTVN 238 (370)
T ss_dssp SSCCCHHHHHHH--HHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEE--EBGG
T ss_pred cCCcCHHHHHHH--HHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEE--Eecc
Confidence 345555544333 7789999986 8899877753 4 6667999999999998 4553
No 124
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.63 E-value=1 Score=43.21 Aligned_cols=80 Identities=11% Similarity=0.156 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHc-CCceE-eccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHH----HhcCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFT-ASAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYA----ASKQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~-stpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~----a~~gk 107 (335)
+...+..+.+..+.. ++.++ -++.+.+.+..+.+.|+|+++|+.+- ......|..+ ...+.
T Consensus 145 ~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~i 224 (351)
T 2c6q_A 145 SEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKG 224 (351)
T ss_dssp BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 345666777777777 88776 57899999999999999999996421 1122233333 23489
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||.+-|.. +-.++.+|+.
T Consensus 225 pvIa~GGI~-~g~di~kAla 243 (351)
T 2c6q_A 225 HIISDGGCS-CPGDVAKAFG 243 (351)
T ss_dssp EEEEESCCC-SHHHHHHHHH
T ss_pred cEEEeCCCC-CHHHHHHHHH
Confidence 999999999 9999998865
No 125
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=91.51 E-value=0.57 Score=43.68 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=61.4
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.-.. .+. +++.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++
T Consensus 41 ~a~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 115 (334)
T 3ohs_X 41 RAKEFAQKHDIPKAY-----GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARS 115 (334)
T ss_dssp HHHHHHHHHTCSCEE-----SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456677888885222 133 44555679999999999999999999999999999999999899999999988776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 116 ~ 116 (334)
T 3ohs_X 116 R 116 (334)
T ss_dssp T
T ss_pred h
Confidence 3
No 126
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=91.43 E-value=0.03 Score=56.00 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=38.0
Q ss_pred EEEeecCCCCcccccCC---cEEeeCC-----CCCCCcchHHHHhcchhhcccCCCCcccCCCCCC
Q psy17999 275 IVSSCDIQAGTVLQEFH---VCIKVAE-----PKGICGTRYASVMGRKVNRDIRRDESIQDIDLDP 332 (335)
Q Consensus 275 l~a~~di~~G~~l~~~d---l~~kr~~-----~~Gi~p~~~~~viG~~~~~di~~~~~i~~~~l~~ 332 (335)
-+|+|||++||+|.-.- ++-+--+ ..+.-|.-+ .-|.+++|||++|++|||+|++-
T Consensus 356 a~Akrdl~~Ge~ldg~Gg~~v~g~~~~~~~~~~~~~lP~gL--~~~~~l~r~v~~g~~it~ddv~~ 419 (446)
T 3upl_A 356 AVAKKDMQPGEHLDAIGQYCYRSWIMTVPEARAAKAIPCGL--LQNGTVIAPIKKGELITYANAAP 419 (446)
T ss_dssp EEESSCBCTTCBCCCTTSSSEEEEEEEHHHHHHHTBCCGGG--CTTCEECSCBCTTCBCBTTTEEC
T ss_pred EEEcccCCCcCEeecCCCceEEEEEeEhhhcccCCCCCeee--CCCCEEeCeeCCCCEeeHHHhcc
Confidence 37999999999996441 1111000 113333333 55789999999999999999863
No 127
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=91.38 E-value=0.76 Score=43.62 Aligned_cols=79 Identities=18% Similarity=0.239 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHc-CCceEec-cCChhhHHHHHhCCCCEEEEcCC---CCC------------CHHHHHHHHhc-CCcE
Q psy17999 48 QEEYVMLQQCADQV-DIMFTAS-AMDQVSFDFLLSANVPFIKIGSG---DSN------------NIPLIKYAASK-QKPL 109 (335)
Q Consensus 48 ~e~~~~L~~~~~~~-Gi~f~st-pfd~~svd~l~~l~v~~~KIaS~---d~~------------n~~LL~~~a~~-gkPv 109 (335)
...+..+.+.++.. ++.++.. +.+.+.+..+.+.|+|++.++.. .+. .+.+|.++++. +.||
T Consensus 134 ~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipV 213 (336)
T 1ypf_A 134 NAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPI 213 (336)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCE
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcE
Confidence 34566666666666 5666665 78899999999999999999431 111 46778777765 8999
Q ss_pred EEeCCCCCCHHHHHHHHH
Q psy17999 110 IISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 110 ilStG~~~tl~Ei~~Av~ 127 (335)
|.+-|.. +..++.+|+.
T Consensus 214 Ia~GGI~-~g~Dv~kala 230 (336)
T 1ypf_A 214 IADGGIR-TNGDVAKSIR 230 (336)
T ss_dssp EEESCCC-STHHHHHHHH
T ss_pred EEeCCCC-CHHHHHHHHH
Confidence 9999999 9999999875
No 128
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=91.32 E-value=0.89 Score=42.67 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=60.5
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.-. | .+. +++.+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..++
T Consensus 57 ~~~~~a~~~~~~~~---~--~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 131 (340)
T 1zh8_A 57 HAEEFAKMVGNPAV---F--DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEK 131 (340)
T ss_dssp HHHHHHHHHSSCEE---E--SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc---c--CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 45567788887221 2 123 45555679999999999999999999999999999999998899999999888776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 132 ~ 132 (340)
T 1zh8_A 132 S 132 (340)
T ss_dssp C
T ss_pred c
Confidence 3
No 129
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.30 E-value=4 Score=37.91 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=89.6
Q ss_pred HHHHHHHHHcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCCCCHH---HHHHHHhcCCcEEEeCCCCCCHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDSNNIP---LIKYAASKQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~~n~~---LL~~~a~~gkPvilStG~~~tl~Ei~~Av 126 (335)
..|.+.++..+++++.-- .|+.+++.+...|+|.+-+....+.+-. |++.+-+.|.-+++... |.+|++.|.
T Consensus 110 ~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh---~~eEl~~A~ 186 (272)
T 3tsm_A 110 EFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVH---DEAEMERAL 186 (272)
T ss_dssp HHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHH
Confidence 345556667788876655 5677888899999999999988887543 45556667999998885 999998886
Q ss_pred HHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC-CCCeecCCCCCChHHHH
Q psy17999 127 TTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCY 205 (335)
Q Consensus 127 ~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~ 205 (335)
+. |. +++ ++.+..-..-.+|+.....|.+..| +++|.--+.-....-..
T Consensus 187 ~~---ga------------------------~iI---Ginnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~ 236 (272)
T 3tsm_A 187 KL---SS------------------------RLL---GVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCL 236 (272)
T ss_dssp TS---CC------------------------SEE---EEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHH
T ss_pred hc---CC------------------------CEE---EECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHH
Confidence 42 22 211 2222222223578888889988886 46664434344455556
Q ss_pred HHHHcCCc--EEEeccC
Q psy17999 206 AAVAMGAQ--IIEKHFT 220 (335)
Q Consensus 206 aAvalGA~--vIEkH~t 220 (335)
.+..+||+ +|=..++
T Consensus 237 ~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 237 RLEKSGIGTFLIGESLM 253 (272)
T ss_dssp HHHTTTCCEEEECHHHH
T ss_pred HHHHcCCCEEEEcHHHc
Confidence 67788998 4433343
No 130
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=91.28 E-value=1.3 Score=42.46 Aligned_cols=73 Identities=8% Similarity=0.116 Sum_probs=57.7
Q ss_pred HHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC-------CC-----------CCCHHHHHHHHh-cCCcEEEeCC
Q psy17999 54 LQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS-------GD-----------SNNIPLIKYAAS-KQKPLIISTG 114 (335)
Q Consensus 54 L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS-------~d-----------~~n~~LL~~~a~-~gkPvilStG 114 (335)
+.+.+++.|+.++.++.+.+.+..+.+.|+|++.+.+ +. ...+.+++++.+ .+.|||..-|
T Consensus 137 ~i~~~~~~g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGG 216 (369)
T 3bw2_A 137 VIARLRRAGTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGG 216 (369)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHCCCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECC
Confidence 3444556799999999998888889999999999932 11 233889988875 5899999999
Q ss_pred CCCCHHHHHHHHH
Q psy17999 115 MLPSIEHVDNIYT 127 (335)
Q Consensus 115 ~~~tl~Ei~~Av~ 127 (335)
.. +.+.+..+++
T Consensus 217 I~-~~~~~~~~l~ 228 (369)
T 3bw2_A 217 IM-RGGQIAAVLA 228 (369)
T ss_dssp CC-SHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 98 9998888765
No 131
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=91.21 E-value=1.5 Score=42.29 Aligned_cols=78 Identities=10% Similarity=0.032 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHcCCceEeccC--C-hhhHHHHHhCCCCEEEEcCCCC--------CCHHHHHHHH-hcCCcEEEeCC
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAM--D-QVSFDFLLSANVPFIKIGSGDS--------NNIPLIKYAA-SKQKPLIISTG 114 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpf--d-~~svd~l~~l~v~~~KIaS~d~--------~n~~LL~~~a-~~gkPvilStG 114 (335)
..+....+.+.+++.|+.++..+. + .+.+..+.+.+++++-+..... .++.-++++. .++.|||+. |
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~g-g 218 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAG-G 218 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEE-C
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEEC-C
Confidence 677778888889988988876443 2 2234555677899987753220 0333344444 469999993 4
Q ss_pred CCCCHHHHHHHH
Q psy17999 115 MLPSIEHVDNIY 126 (335)
Q Consensus 115 ~~~tl~Ei~~Av 126 (335)
.. |.++...++
T Consensus 219 i~-t~e~a~~~~ 229 (393)
T 2qr6_A 219 VN-DYTTALHMM 229 (393)
T ss_dssp CC-SHHHHHHHH
T ss_pred cC-CHHHHHHHH
Confidence 44 788766554
No 132
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=91.21 E-value=1 Score=42.43 Aligned_cols=74 Identities=7% Similarity=0.076 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCceEeccCChhhHH-HHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFD-FLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd-~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
....+.++++|+... .+.+ ++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..+
T Consensus 64 ~~~~~~a~~~g~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~ 137 (350)
T 3rc1_A 64 DRAKRFTERFGGEPV------EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVAR 137 (350)
T ss_dssp HHHHHHHHHHCSEEE------ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCc------CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 445677788898764 2333 444567999999999999999999999999999999998889999999998877
Q ss_pred h
Q psy17999 131 Q 131 (335)
Q Consensus 131 ~ 131 (335)
+
T Consensus 138 ~ 138 (350)
T 3rc1_A 138 E 138 (350)
T ss_dssp H
T ss_pred H
Confidence 6
No 133
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=91.13 E-value=5.2 Score=37.26 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=50.0
Q ss_pred HHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEe
Q psy17999 55 QQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIS 112 (335)
Q Consensus 55 ~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilS 112 (335)
.+..++.++.+...-|..+-++...+.|++++===|+-..+..+++-+|+++.|+||.
T Consensus 74 i~~l~~~~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlM 131 (270)
T 4hb7_A 74 VEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILM 131 (270)
T ss_dssp HHHHTTSSSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEE
T ss_pred HHHhhcCCCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEe
Confidence 3444557999999999999999999999999876677777889999999999999996
No 134
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=91.10 E-value=1.5 Score=41.24 Aligned_cols=65 Identities=12% Similarity=0.070 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHc---CCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeC
Q psy17999 48 QEEYVMLQQCADQV---DIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 48 ~e~~~~L~~~~~~~---Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilSt 113 (335)
+|++.++....+.. ++.+...-|+.+.++...+.|.+++==-|+.. ...++.-++++|.|+|+..
T Consensus 80 ~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh 147 (294)
T 2y5s_A 80 DEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMH 147 (294)
T ss_dssp HHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEEC
Confidence 45565555444443 99999999999999999999999987777765 6788999999999999964
No 135
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=90.91 E-value=4.9 Score=36.54 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=79.0
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
..+|.+.|+++|+.|+.. +.++....+|+|.+-++..++. ..-++++-..++-|-+|+ . |.+|+..|.+
T Consensus 85 a~~l~~l~~~~~~~liIn----d~~~lA~~~gAdGVHLg~~dl~-~~~~r~~~~~~~~iG~S~--h-t~~Ea~~A~~--- 153 (243)
T 3o63_A 85 CEILADAAHRYGALFAVN----DRADIARAAGADVLHLGQRDLP-VNVARQILAPDTLIGRST--H-DPDQVAAAAA--- 153 (243)
T ss_dssp HHHHHHHHHHTTCEEEEE----SCHHHHHHHTCSEEEECTTSSC-HHHHHHHSCTTCEEEEEE--C-SHHHHHHHHH---
T ss_pred HHHHHHHHHhhCCEEEEe----CHHHHHHHhCCCEEEecCCcCC-HHHHHHhhCCCCEEEEeC--C-CHHHHHHHhh---
Confidence 367889999999999985 3456677889999999999885 344555544466666666 5 8999888765
Q ss_pred hcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc----cCCCchHHHHHHHHC-CCCCe-ecCCCCCChHHH
Q psy17999 131 QYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY----HDINLNVIHTLRSRY-PDIPI-GYSGHENGVHVC 204 (335)
Q Consensus 131 ~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~----~~~nL~~i~~L~~~f-p~~pV-G~SdHt~g~~~~ 204 (335)
.|. +++.+- .-||++. ....+..+..+++.. .++|| ...+=+. .-.
T Consensus 154 ~Ga------------------------DyI~vg--pvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~--~ni 205 (243)
T 3o63_A 154 GDA------------------------DYFCVG--PCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINA--QRL 205 (243)
T ss_dssp SSC------------------------SEEEEC--CSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCT--TTH
T ss_pred CCC------------------------CEEEEc--CccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCH--HHH
Confidence 232 333321 1256543 246788888887753 27887 3333222 223
Q ss_pred HHHHHcCCc
Q psy17999 205 YAAVAMGAQ 213 (335)
Q Consensus 205 ~aAvalGA~ 213 (335)
....+.||+
T Consensus 206 ~~~~~aGa~ 214 (243)
T 3o63_A 206 PAVLDAGAR 214 (243)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 345677887
No 136
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.79 E-value=0.82 Score=45.81 Aligned_cols=115 Identities=11% Similarity=0.099 Sum_probs=69.9
Q ss_pred cCChhhHHHHHhCCCCEEEEcCCCCCCH---HHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeeccc
Q psy17999 69 AMDQVSFDFLLSANVPFIKIGSGDSNNI---PLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVS 143 (335)
Q Consensus 69 pfd~~svd~l~~l~v~~~KIaS~d~~n~---~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~ 143 (335)
+-+.+.++.+.+.|+|++-|.+..-... .+++++.+. +.||+..+ .. |.++...+.+ .|..
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~-v~-t~e~a~~l~~---aGaD--------- 293 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN-IA-TAEAAKALAE---AGAD--------- 293 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE-EC-SHHHHHHHHH---TTCS---------
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee-eC-cHHHHHHHHH---cCCC---------
Confidence 3446678888889999999988876665 566666654 67998843 34 6766655433 2432
Q ss_pred CCCCCCCCcccccCceEEe------eecCCCCCCccCCCchHHHHHHH---HCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 144 AYPTPYPTVKQYHSNLSIL------HCVSAYPTPYHDINLNVIHTLRS---RYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 144 g~~~~~~~~~~~~~~l~ll------HC~s~YP~~~~~~nL~~i~~L~~---~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+.+ +|++..-+.....++..+..+.+ .+ ++||.-++=-....-...|.++||+
T Consensus 294 ---------------~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kal~~GAd 356 (490)
T 4avf_A 294 ---------------AVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT-GVPLIADGGIRFSGDLAKAMVAGAY 356 (490)
T ss_dssp ---------------EEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT-TCCEEEESCCCSHHHHHHHHHHTCS
T ss_pred ---------------EEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC-CCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 3332 34332111122345677777766 34 7898655434334445567888998
No 137
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=90.78 E-value=2.8 Score=39.73 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCCceEe-cc----CChhhHHHHHhCCCC---EEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHH
Q psy17999 51 YVMLQQCADQVDIMFTA-SA----MDQVSFDFLLSANVP---FIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHV 122 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~s-tp----fd~~svd~l~~l~v~---~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei 122 (335)
...+....+..++++.. .- ++.+.++...+.+.+ ++==.|+. +...++..+++.|.||++.. +. +++..
T Consensus 111 ~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~vv~m~-~~-dv~~l 187 (310)
T 2h9a_B 111 AEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHSVVASA-PL-DINLS 187 (310)
T ss_dssp HHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCEEEEEC-SS-CHHHH
T ss_pred HHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCCEEEEC-hh-HHHHH
Confidence 44455555566998888 88 999999999988886 66555555 55567788888999999965 34 67778
Q ss_pred HHHHHHHHh
Q psy17999 123 DNIYTTVKQ 131 (335)
Q Consensus 123 ~~Av~~i~~ 131 (335)
.+.++.+.+
T Consensus 188 ~~~~~~a~~ 196 (310)
T 2h9a_B 188 KQLNIMIME 196 (310)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 887777776
No 138
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=90.76 E-value=1 Score=42.23 Aligned_cols=74 Identities=14% Similarity=0.219 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.+++.|+... .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 42 ~~~~~~~~~g~~~~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~ 115 (354)
T 3db2_A 42 KREKFGKRYNCAGD------ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE 115 (354)
T ss_dssp HHHHHHHHHTCCCC------SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCc------CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH
Confidence 34556677888652 233 44555679999999999999999999999999999999988899999999888776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 116 ~ 116 (354)
T 3db2_A 116 T 116 (354)
T ss_dssp H
T ss_pred c
Confidence 3
No 139
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=90.71 E-value=0.87 Score=43.97 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC----------CCCCHHHHHHHHh--------cC---C
Q psy17999 50 EYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG----------DSNNIPLIKYAAS--------KQ---K 107 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~----------d~~n~~LL~~~a~--------~g---k 107 (335)
.|..+.+.++..+++++. .+.+.+.+..+.+.|+|+++|+.+ ....+..|..+.+ .+ .
T Consensus 199 ~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~i 278 (393)
T 2qr6_A 199 EALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYV 278 (393)
T ss_dssp ---CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcce
Confidence 344566677778998886 778899999999999999999652 2455666655444 34 8
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||.+-|.. +..++.+|+.
T Consensus 279 pvia~GGI~-~~~dv~kala 297 (393)
T 2qr6_A 279 HIIADGSIE-NSGDVVKAIA 297 (393)
T ss_dssp EEEECSSCC-SHHHHHHHHH
T ss_pred EEEEECCCC-CHHHHHHHHH
Confidence 999999999 9999998876
No 140
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=90.59 E-value=0.8 Score=42.11 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
...+.++++|+.. | .+.+.+.+ ++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 44 ~~~~~a~~~~~~~----~--~~~~~ll~-~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (308)
T 3uuw_A 44 KREKICSDYRIMP----F--DSIESLAK-KCDCIFLHSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKK 116 (308)
T ss_dssp HHHHHHHHHTCCB----C--SCHHHHHT-TCSEEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC----c--CCHHHHHh-cCCEEEEeCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 3455677888765 2 24455555 799999999999999999999999999999999888999999998887763
No 141
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.57 E-value=1 Score=45.16 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=70.9
Q ss_pred cCChhhHHHHHhCCCCEEEEcCCCCCCH---HHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeeccc
Q psy17999 69 AMDQVSFDFLLSANVPFIKIGSGDSNNI---PLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVS 143 (335)
Q Consensus 69 pfd~~svd~l~~l~v~~~KIaS~d~~n~---~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~ 143 (335)
+-+.+.++.+.+.|+|++-|.+..-... .+++++.+. ++||++.+. . +.++...+++ .|-.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v-~-t~e~a~~l~~---aGaD--------- 295 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-A-TAEGARALIE---AGVS--------- 295 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE-C-SHHHHHHHHH---HTCS---------
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEccc-C-cHHHHHHHHH---hCCC---------
Confidence 4456778888889999999998876554 566666664 789998443 3 6666655543 2432
Q ss_pred CCCCCCCCcccccCceEEe------eecCCCCCCccCCCchHHHHHHH---HCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 144 AYPTPYPTVKQYHSNLSIL------HCVSAYPTPYHDINLNVIHTLRS---RYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 144 g~~~~~~~~~~~~~~l~ll------HC~s~YP~~~~~~nL~~i~~L~~---~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+.. +|++..-+.....++..+..+.+ .+ ++||.-++=-....-...|.++||+
T Consensus 296 ---------------~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~GAd 358 (496)
T 4fxs_A 296 ---------------AVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY-GIPVIADGGIRFSGDISKAIAAGAS 358 (496)
T ss_dssp ---------------EEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred ---------------EEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC-CCeEEEeCCCCCHHHHHHHHHcCCC
Confidence 2222 45442111112345666666665 45 7898655434334445567889998
No 142
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=90.49 E-value=12 Score=35.34 Aligned_cols=142 Identities=8% Similarity=0.025 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHHcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCCCCHHHH----------------HHHHhcCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDSNNIPLI----------------KYAASKQK 107 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~~n~~LL----------------~~~a~~gk 107 (335)
++.+.+.++.+.+++.|+.+..|+ .+++.++.|.+.|++.+-|+=.. +..++ +.+.+.|.
T Consensus 131 ~~~~~l~~ll~~ik~~g~~i~~t~G~l~~e~l~~L~~aGvd~v~i~les--~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi 208 (369)
T 1r30_A 131 RDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDT--SPEFYGNIITTRTYQERLDTLEKVRDAGI 208 (369)
T ss_dssp TTHHHHHHHHHHHHHTTSEEEEECSSCCHHHHHHHHHHCCCEEECCCBS--CHHHHHHHCCSSCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHCCCCEEeecCcC--CHHHHHHhCCCCCHHHHHHHHHHHHHcCC
Confidence 456888899999999998877666 57788888999999988754221 22332 22333344
Q ss_pred cE----EEeCCCCCCHHHHHHHHHHHHh-cC-CCCceeecccCCCCCCCCcccccCceEEeeecCCCC-CCcc-------
Q psy17999 108 PL----IISTGMLPSIEHVDNIYTTVKQ-YH-SNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYP-TPYH------- 173 (335)
Q Consensus 108 Pv----ilStG~~~tl~Ei~~Av~~i~~-g~-~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP-~~~~------- 173 (335)
+| |+.. .- |.+|+.+.++++.. +. . +-+-+|-...+| +|..
T Consensus 209 ~v~~~~I~Gl-~e-t~ed~~~~l~~l~~l~~~~-----------------------~~i~~~~l~p~~gT~l~~~~~~~~ 263 (369)
T 1r30_A 209 KVCSGGIVGL-GE-TVKDRAGLLLQLANLPTPP-----------------------ESVPINMLVKVKGTPLADNDDVDA 263 (369)
T ss_dssp EEECCEEECS-SC-CHHHHHHHHHHHHSSSSCC-----------------------SEEEEEECCCCTTSTTSSCCCCCH
T ss_pred eeeeeeEeeC-CC-CHHHHHHHHHHHHhhcCCC-----------------------CEEEeeeeeecCCCcCCCCCCCCH
Confidence 43 3333 23 78888888888776 31 2 233344444444 3322
Q ss_pred CCCchHHHHHHHHCCCCCeecC--CCCCChHHHHHHHHcCCcE
Q psy17999 174 DINLNVIHTLRSRYPDIPIGYS--GHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 174 ~~nL~~i~~L~~~fp~~pVG~S--dHt~g~~~~~aAvalGA~v 214 (335)
+--++.+...|...|+.-+-.| -...+......++..||+.
T Consensus 264 ~~~~~~~~~~r~~l~~~~i~i~~~~~~l~~~~~~~~l~~Gan~ 306 (369)
T 1r30_A 264 FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANS 306 (369)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEESSGGGSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHhCCCCceEeecchhhcChHHHHHHhhCCCce
Confidence 2224556666777776433222 1234556677889999994
No 143
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.43 E-value=7 Score=36.09 Aligned_cols=168 Identities=14% Similarity=0.077 Sum_probs=90.8
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcc-cHHHHHHhh--cCCHHHHHHHHHHHH-H-cCCceEeccC-C---
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWAN-TYGQHKQHL--EFSQEEYVMLQQCAD-Q-VDIMFTASAM-D--- 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--el~~e~~~~L~~~~~-~-~Gi~f~stpf-d--- 71 (335)
++|||++-++.- |..|...|. .+....+-+ .++.++..++.+..+ + ..++++.-.+ +
T Consensus 43 ~~GaD~iElgiP--------------fSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 43 DNGADALELGFP--------------FSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp HTTCSSEEEECC--------------CSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred HcCCCEEEECCC--------------CCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 379999988873 333322222 122222222 355555444444444 3 4666655433 3
Q ss_pred ----hhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhcCCc-EEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCC
Q psy17999 72 ----QVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAASKQKP-LIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAY 145 (335)
Q Consensus 72 ----~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~gkP-vilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~ 145 (335)
+.-++.+.+.|++.+-|+---.. -.++++++.+.|.. +.+-+..+ +.+.+..+.+. . .
T Consensus 109 ~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t-~~eri~~i~~~---~-~----------- 172 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNA-DADTLKMVSEQ---G-E----------- 172 (267)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTC-CHHHHHHHHHH---C-C-----------
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCC-CHHHHHHHHHh---C-C-----------
Confidence 23356777889999988744332 34667777778875 44666666 77766665543 1 1
Q ss_pred CCCCCCcccccCceEEeeecCCCC-----CCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 146 PTPYPTVKQYHSNLSILHCVSAYP-----TPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 146 ~~~~~~~~~~~~~l~llHC~s~YP-----~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+ +-|+|..+ +....-....+..+|+.. ++||..-.--........++..||+
T Consensus 173 ------------gf--vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gAD 230 (267)
T 3vnd_A 173 ------------GY--TYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAA 230 (267)
T ss_dssp ------------SC--EEESCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCS
T ss_pred ------------Cc--EEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCC
Confidence 11 23333333 222222346678888877 8898542222224444447888887
No 144
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.41 E-value=1.6 Score=37.75 Aligned_cols=121 Identities=11% Similarity=0.077 Sum_probs=70.8
Q ss_pred CCceEeccC---Chhh-HHHHHhCCCCEEEEcCCCC-CC-HHHHHHHHhcCCcEEEe-CCCCCCH-HHHHHHHHHHHhcC
Q psy17999 62 DIMFTASAM---DQVS-FDFLLSANVPFIKIGSGDS-NN-IPLIKYAASKQKPLIIS-TGMLPSI-EHVDNIYTTVKQYH 133 (335)
Q Consensus 62 Gi~f~stpf---d~~s-vd~l~~l~v~~~KIaS~d~-~n-~~LL~~~a~~gkPvilS-tG~~~tl-~Ei~~Av~~i~~g~ 133 (335)
++++..... ..+. ++.+.+.|++++-++.... .+ ..+++++.+.|+++++. .+.. |. +++..+.+ .|.
T Consensus 53 ~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-t~~~~~~~~~~---~g~ 128 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVD-DLPARVRLLEE---AGA 128 (211)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCS-SHHHHHHHHHH---HTC
T ss_pred CCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHH---cCC
Confidence 666655442 2333 7888899999999987643 23 46777777789999875 4445 54 33444332 232
Q ss_pred CCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC-ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCC
Q psy17999 134 SNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP-YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGA 212 (335)
Q Consensus 134 ~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~-~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA 212 (335)
+++.++ ..|... ....++..+..+++.+|++||..++=-. ..-...+...||
T Consensus 129 ------------------------d~i~v~--~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Ga 181 (211)
T 3f4w_A 129 ------------------------DMLAVH--TGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGP 181 (211)
T ss_dssp ------------------------CEEEEE--CCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCC
T ss_pred ------------------------CEEEEc--CCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCC
Confidence 332111 111100 0112677889999988788884433222 334455677899
Q ss_pred c
Q psy17999 213 Q 213 (335)
Q Consensus 213 ~ 213 (335)
+
T Consensus 182 d 182 (211)
T 3f4w_A 182 D 182 (211)
T ss_dssp S
T ss_pred C
Confidence 8
No 145
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=90.39 E-value=1 Score=43.02 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=60.6
Q ss_pred HHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 54 LQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 54 L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
..+.++++|+.+..+ --+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 41 ~~~~a~~~g~~~~~~-----~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 114 (387)
T 3moi_A 41 RERFGKEYGIPVFAT-----LAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERA 114 (387)
T ss_dssp HHHHHHHHTCCEESS-----HHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeECC-----HHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHh
Confidence 445677789875432 12455556799999999999999999999999999999999888999999998887763
No 146
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.36 E-value=4.4 Score=38.62 Aligned_cols=115 Identities=10% Similarity=0.124 Sum_probs=68.4
Q ss_pred HHHHHhCCCCEEEEcC--------------CCCCCHHHHHHHHh-----cCCcEEEe--CCCC--CCHHHHHHHHHHHHh
Q psy17999 75 FDFLLSANVPFIKIGS--------------GDSNNIPLIKYAAS-----KQKPLIIS--TGML--PSIEHVDNIYTTVKQ 131 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS--------------~d~~n~~LL~~~a~-----~gkPvilS--tG~~--~tl~Ei~~Av~~i~~ 131 (335)
+..+.+.|+|.+-|.. .-+++..++.++-+ .+.||+++ .|.. .+.++....++.+..
T Consensus 76 A~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~ 155 (350)
T 3b0p_A 76 ARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE 155 (350)
T ss_dssp HHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHH
Confidence 3455566777776653 34566666655433 48999994 4543 134556666666665
Q ss_pred cCCCCceeecccCCCCCCCCcccccCceEEeeecCC---CCCC----ccCCCchHHHHHHHHCCCCCeecCCCCCChHHH
Q psy17999 132 YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA---YPTP----YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVC 204 (335)
Q Consensus 132 g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~---YP~~----~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~ 204 (335)
.+. +.+.+|+-+. |-.+ ....++..+..+++.+|++||..++--....-+
T Consensus 156 aG~-----------------------d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda 212 (350)
T 3b0p_A 156 AGV-----------------------KVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEA 212 (350)
T ss_dssp TTC-----------------------CEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHH
T ss_pred cCC-----------------------CEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHH
Confidence 222 4555565432 2110 123678899999999888999766544445555
Q ss_pred HHHHHcCCc
Q psy17999 205 YAAVAMGAQ 213 (335)
Q Consensus 205 ~aAvalGA~ 213 (335)
..+++ ||+
T Consensus 213 ~~~l~-GaD 220 (350)
T 3b0p_A 213 LFHLK-RVD 220 (350)
T ss_dssp HHHHT-TSS
T ss_pred HHHHh-CCC
Confidence 55666 887
No 147
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=90.26 E-value=1.7 Score=43.16 Aligned_cols=80 Identities=14% Similarity=0.197 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHHc-CCceE-eccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHHh----cCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFT-ASAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAAS----KQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~-stpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a~----~gk 107 (335)
+...+..+.+.++.. +++++ -.+.+.+.+..+.+.|+|+++++..- .-...+|..+++ .+.
T Consensus 262 ~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~i 341 (494)
T 1vrd_A 262 SRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDV 341 (494)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 345667777777776 67765 56788888999999999999994421 234445555544 389
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||.+-|.. +..++.+|+.
T Consensus 342 pvia~GGI~-~~~di~kala 360 (494)
T 1vrd_A 342 PIIADGGIR-YSGDIVKALA 360 (494)
T ss_dssp CEEEESCCC-SHHHHHHHHH
T ss_pred CEEEECCcC-CHHHHHHHHH
Confidence 999999999 9999998875
No 148
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=90.23 E-value=5.8 Score=37.92 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=82.0
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCC----------CCC-----------------H
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGD----------SNN-----------------I 96 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d----------~~n-----------------~ 96 (335)
-+|+.++..++.+.=. +++..+.+.|.|.+.|..+. .+| .
T Consensus 146 ~~mt~~eI~~ii~~f~-------------~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~ 212 (363)
T 3l5l_A 146 REMTLDDIARVKQDFV-------------DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLL 212 (363)
T ss_dssp EECCHHHHHHHHHHHH-------------HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH-------------HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHH
Confidence 3699998887765321 34566677889999987542 222 3
Q ss_pred HHHHHHHhc---CCcEEEeCCCC-------CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC
Q psy17999 97 PLIKYAASK---QKPLIISTGML-------PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS 166 (335)
Q Consensus 97 ~LL~~~a~~---gkPvilStG~~-------~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s 166 (335)
.+++++.+. ++||.+..... .+++|....++.+...+- ++.-+|+..
T Consensus 213 eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gv-----------------------d~i~vs~g~ 269 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGL-----------------------DLLSVSVGF 269 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTC-----------------------CEEEEEECC
T ss_pred HHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCC-----------------------CEEEEecCc
Confidence 455555543 57898865421 156666666666655222 222222222
Q ss_pred CCCC---C-ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 167 AYPT---P-YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 167 ~YP~---~-~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
.++. + ....++..+..+|+.+ ++||.-.+--.....+..++..| |+.|-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~V~ 323 (363)
T 3l5l_A 270 TIPDTNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDLVS 323 (363)
T ss_dssp CSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSEEE
T ss_pred cccccccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccEEE
Confidence 2221 1 1345788889999999 89996555444466677788888 88665
No 149
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=90.21 E-value=0.12 Score=46.44 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc
Q psy17999 51 YVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK 105 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~ 105 (335)
+..+.+.++..+++++.. ..+.+.++.+.+.|++.+-|++..+.|..+++++++.
T Consensus 68 ~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~ 124 (247)
T 3tdn_A 68 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQT 124 (247)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHH
Confidence 567778888899999887 5788889988899999999999999999988777653
No 150
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=90.17 E-value=1.1 Score=42.70 Aligned_cols=119 Identities=11% Similarity=0.147 Sum_probs=68.8
Q ss_pred CCCCcEEEeeccc---ccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHH-HcCCceEecc-------
Q psy17999 1 ECGADCVKFQKSC---LSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCAD-QVDIMFTASA------- 69 (335)
Q Consensus 1 ~aGaDaVKFQ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~-~~Gi~f~stp------- 69 (335)
++|.|+|...--. .+.+++...- .....|+.+ +.++..|..|-.+.+++.+- +.-|.+=.+|
T Consensus 163 ~aGfDgVEih~a~GyLl~qFlsp~~N----~R~D~yGGs---lenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 163 RAGFQVIELHMAHGYLLSSFLSPLSN----QRTDAYGGS---LENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HTTCCEEEEEECTTSHHHHHHCTTTC----CCCSTTSSS---HHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HcCCCEEEECCccchHHHHhcCCccc----ccCCCCCcC---HHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 4799999977532 2222222110 001234443 23345566666666666552 1112222344
Q ss_pred CChhh----HHHHHhCCCCEEEEcCC-----------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 70 MDQVS----FDFLLSANVPFIKIGSG-----------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 70 fd~~s----vd~l~~l~v~~~KIaS~-----------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
++.+. +..|++.|+|++-+..+ .-.++++++++.+ .+.|||..-|.. |.++.+++++
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~-t~e~a~~~l~ 308 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLIT-TPEQAETLLQ 308 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCC-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCC-CHHHHHHHHH
Confidence 33333 56677889999998752 2357888888876 489999887778 8887776543
No 151
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=90.14 E-value=0.67 Score=44.03 Aligned_cols=75 Identities=11% Similarity=0.125 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
....+.++++|+.-. | .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..+
T Consensus 62 ~~a~~~a~~~~~~~~---~--~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 136 (361)
T 3u3x_A 62 ALAAEFSAVYADARR---I--ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQA 136 (361)
T ss_dssp HHHHHHHHHSSSCCE---E--SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcc---c--CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 345667778874322 1 233 3445567999999999999999999999999999999999989999999998877
Q ss_pred h
Q psy17999 131 Q 131 (335)
Q Consensus 131 ~ 131 (335)
+
T Consensus 137 ~ 137 (361)
T 3u3x_A 137 E 137 (361)
T ss_dssp T
T ss_pred H
Confidence 6
No 152
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.13 E-value=1.3 Score=42.25 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=72.1
Q ss_pred CCCCcEEEeeccc---ccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQKSC---LSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
+||+|+|...--. .+.++++..- .....||.+. .++..|..|-.+.+++.+ ..-|.+=.+|+|
T Consensus 155 ~aGfDgVEih~a~GyLl~qFlsp~~N----~R~D~yGGsl---enR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 155 EAGFDVIEIHAAHGYLINEFLSPLSN----RRQDEYGGSP---ENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HHTCSEEEEEECTTCHHHHHHCTTTC----CCCSTTSSSH---HHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSC
T ss_pred HcCCCEEEEccccchHHHHcCCCccC----cCCCcccCCH---HHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCC
Confidence 3699999876522 2222222110 0012345443 344557777777777777 444444445543
Q ss_pred -hh----hHHHHHhCCCCEEEEcCC----------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 72 -QV----SFDFLLSANVPFIKIGSG----------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 72 -~~----svd~l~~l~v~~~KIaS~----------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.+ -+..|++.|+|++-|.++ .-.++++++++.+ .+.|||..-|.. |.++.+++++
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~-s~e~a~~~L~ 297 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLIT-SGWQAEEILQ 297 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCC-CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCC-CHHHHHHHHH
Confidence 22 256677889999999653 2347888888876 589999998888 8887776543
No 153
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=90.09 E-value=0.72 Score=44.31 Aligned_cols=78 Identities=8% Similarity=0.151 Sum_probs=61.0
Q ss_pred HHHHHHHHHcCCceEeccCChhhH-HHHHh-----CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSF-DFLLS-----ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~sv-d~l~~-----l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~A 125 (335)
....+.++++|+.-. ..|+ +. +++.+ -++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.
T Consensus 52 ~~a~~~a~~~g~~~~-~~~~--~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l 128 (398)
T 3dty_A 52 IRGSAFGEQLGVDSE-RCYA--DYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENL 128 (398)
T ss_dssp HHHHHHHHHTTCCGG-GBCS--SHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCcc-eeeC--CHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHH
Confidence 455677888998410 1121 33 34443 359999999999999999999999999999999999999999999
Q ss_pred HHHHHhc
Q psy17999 126 YTTVKQY 132 (335)
Q Consensus 126 v~~i~~g 132 (335)
++..++.
T Consensus 129 ~~~a~~~ 135 (398)
T 3dty_A 129 RELSHKH 135 (398)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9987763
No 154
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=90.06 E-value=0.73 Score=42.34 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHc---CCceE-eccCChhhHHHHHhCCCCEEEE-----cC-CCCCCHHHHHHHHh-cCCcEEEeCCCCC
Q psy17999 49 EEYVMLQQCADQV---DIMFT-ASAMDQVSFDFLLSANVPFIKI-----GS-GDSNNIPLIKYAAS-KQKPLIISTGMLP 117 (335)
Q Consensus 49 e~~~~L~~~~~~~---Gi~f~-stpfd~~svd~l~~l~v~~~KI-----aS-~d~~n~~LL~~~a~-~gkPvilStG~~~ 117 (335)
++..++.+.|+++ |+.++ .+.-+.+.+..+.+.+.+++-. ++ ..+++..+|+.+.+ ++.||++.-|.+
T Consensus 110 ~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~- 188 (264)
T 1xm3_A 110 PDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIG- 188 (264)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-
T ss_pred cchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCC-
Confidence 4567888999998 98888 5656777788888899999833 12 13556888888765 489999999999
Q ss_pred CHHHHHHHHH
Q psy17999 118 SIEHVDNIYT 127 (335)
Q Consensus 118 tl~Ei~~Av~ 127 (335)
+.+++..+++
T Consensus 189 t~eda~~~~~ 198 (264)
T 1xm3_A 189 SPKDAAYAME 198 (264)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999887755
No 155
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.95 E-value=0.7 Score=42.14 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAASK--QKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av 126 (335)
.-.++.++|+++|+.++..++++..+....++|+|++|+=..+.. -..+|+++..- +.|++ -||+= +++ ++-
T Consensus 115 ~~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~-ptGGI-~~~---n~~ 189 (232)
T 4e38_A 115 FNPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLM-PTGGI-TPS---NID 189 (232)
T ss_dssp CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEE-EBSSC-CTT---THH
T ss_pred CCHHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCee-eEcCC-CHH---HHH
Confidence 456788999999999999999999999999999999999777765 58999999873 46665 67766 654 455
Q ss_pred HHHHhcC
Q psy17999 127 TTVKQYH 133 (335)
Q Consensus 127 ~~i~~g~ 133 (335)
+++..|+
T Consensus 190 ~~l~aGa 196 (232)
T 4e38_A 190 NYLAIPQ 196 (232)
T ss_dssp HHHTSTT
T ss_pred HHHHCCC
Confidence 5665453
No 156
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=89.93 E-value=1.3 Score=39.86 Aligned_cols=119 Identities=12% Similarity=0.040 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHcC--CceEec--cCC-hhhHHHHHhCCCCEEEEcCCC-----CC---CHHHHHHHHhcCCcEEEeCCCC
Q psy17999 50 EYVMLQQCADQVD--IMFTAS--AMD-QVSFDFLLSANVPFIKIGSGD-----SN---NIPLIKYAASKQKPLIISTGML 116 (335)
Q Consensus 50 ~~~~L~~~~~~~G--i~f~st--pfd-~~svd~l~~l~v~~~KIaS~d-----~~---n~~LL~~~a~~gkPvilStG~~ 116 (335)
...++.+.++++. +..++. |.+ .+.++.+.+.|+..+++.... ++ -.++++.+++.|+||++=+|.+
T Consensus 68 ~n~~~~~~~~~~p~r~~~~~~v~p~~~~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 147 (288)
T 2ffi_A 68 DNRYLLSALQTVPGQLRGVVMLERDVEQATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA 147 (288)
T ss_dssp CCHHHHHHHHHSTTTBCCBBCCCSSCCHHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT
T ss_pred cHHHHHHHHHHCCCCEEEEEEeCCCCCHHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh
Confidence 3445666677664 322222 222 244566667789999997632 22 4789999999999999998877
Q ss_pred CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc-cCCCchHHHHHHHHCCCCCeecC
Q psy17999 117 PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY-HDINLNVIHTLRSRYPDIPIGYS 195 (335)
Q Consensus 117 ~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~-~~~nL~~i~~L~~~fp~~pVG~S 195 (335)
.+.++... +++..- ++++.||.+..+... .+..+..+..+. .+|++-++.|
T Consensus 148 -~~~~~~~~---~~~~pl-----------------------~~vi~H~g~~~~~~~~~~~~~~~~~~l~-~~~n~y~~~s 199 (288)
T 2ffi_A 148 -DIPVLVRA---LQPYGL-----------------------DIVIDHFGRPDARRGLGQPGFAELLTLS-GRGKVWVKVS 199 (288)
T ss_dssp -THHHHHHH---HTTTTC-----------------------CEEESGGGSCCTTSCTTCTTHHHHTTCC-CCSCEEEEEE
T ss_pred -hHHHHHHH---HHHCCC-----------------------CEEEECCCCCCCCCCCCChhHHHHHHHH-hCCCEEEEeC
Confidence 66665543 333112 799999998766432 223344444442 2456666666
Q ss_pred C
Q psy17999 196 G 196 (335)
Q Consensus 196 d 196 (335)
+
T Consensus 200 g 200 (288)
T 2ffi_A 200 G 200 (288)
T ss_dssp C
T ss_pred c
Confidence 4
No 157
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=89.44 E-value=0.54 Score=41.97 Aligned_cols=132 Identities=6% Similarity=-0.054 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEE--eCC--------C--
Q psy17999 50 EYVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLII--STG--------M-- 115 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvil--StG--------~-- 115 (335)
.+..+.+.+ +.+++++.. ..+.+.++.+.+.|++.+-+++..+.|..+++++...+..+++ +.- -
T Consensus 62 ~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~ 140 (241)
T 1qo2_A 62 NLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLA 140 (241)
T ss_dssp THHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSS
T ss_pred hHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEECCcee
Confidence 356666666 678888874 5677788888889999999999999999999888444544443 331 0
Q ss_pred -C-CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCee
Q psy17999 116 -L-PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIG 193 (335)
Q Consensus 116 -~-~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG 193 (335)
+ .+..|+...++ ..|. ..++.|.++.--+ ....|+..+..+++.. ++||.
T Consensus 141 ~~~~~~~e~~~~~~--~~G~------------------------~~i~~t~~~~~g~-~~g~~~~~i~~l~~~~-~iPvi 192 (241)
T 1qo2_A 141 EEEIDPVSLLKRLK--EYGL------------------------EEIVHTEIEKDGT-LQEHDFSLTKKIAIEA-EVKVL 192 (241)
T ss_dssp CSCCCHHHHHHHHH--TTTC------------------------CEEEEEETTHHHH-TCCCCHHHHHHHHHHH-TCEEE
T ss_pred cCCCCHHHHHHHHH--hCCC------------------------CEEEEEeeccccc-CCcCCHHHHHHHHHhc-CCcEE
Confidence 0 14445433221 1122 4555565431110 1235899999999988 89996
Q ss_pred cCCCCCChHHHHHHHHc
Q psy17999 194 YSGHENGVHVCYAAVAM 210 (335)
Q Consensus 194 ~SdHt~g~~~~~aAval 210 (335)
-++--....-......+
T Consensus 193 a~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 193 AAGGISSENSLKTAQKV 209 (241)
T ss_dssp EESSCCSHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHhc
Confidence 65533333333334445
No 158
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=89.27 E-value=0.69 Score=43.26 Aligned_cols=79 Identities=11% Similarity=0.144 Sum_probs=62.2
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
...+.+.++++|+.. ..|+ .--++|.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..+
T Consensus 39 ~~~~~~~~~~~~~~~--~~~~-~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 115 (337)
T 3ip3_A 39 LSKLEKAISEMNIKP--KKYN-NWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQ 115 (337)
T ss_dssp CHHHHHHHHTTTCCC--EECS-SHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC--cccC-CHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 345566677778632 1232 2224555567999999999999999999999999999999999999999999999887
Q ss_pred hc
Q psy17999 131 QY 132 (335)
Q Consensus 131 ~g 132 (335)
+.
T Consensus 116 ~~ 117 (337)
T 3ip3_A 116 KV 117 (337)
T ss_dssp HH
T ss_pred Hh
Confidence 63
No 159
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=89.21 E-value=2.2 Score=41.13 Aligned_cols=173 Identities=10% Similarity=0.106 Sum_probs=95.4
Q ss_pred cCCceEeccCC--hhh----HHHHH---hCCCCEEEEc--CC------CC-CCHHHHHH----HHh-cCCcEEEeCCCCC
Q psy17999 61 VDIMFTASAMD--QVS----FDFLL---SANVPFIKIG--SG------DS-NNIPLIKY----AAS-KQKPLIISTGMLP 117 (335)
Q Consensus 61 ~Gi~f~stpfd--~~s----vd~l~---~l~v~~~KIa--S~------d~-~n~~LL~~----~a~-~gkPvilStG~~~ 117 (335)
.+.+++.+.+- .+. +..+. +.++|+|-|- +. .+ .+.+++.+ +.+ +++||+++.....
T Consensus 125 ~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~ 204 (354)
T 4ef8_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF 204 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCC
T ss_pred CCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCC
Confidence 46777777653 332 33344 2346666542 21 22 45555444 333 5899999988666
Q ss_pred CHHHHHHHHHHHHh-cCCCCceeecc----cCCCCCCCCcccccC-ceEE-----eeecCCCCCCccCCCchHHHHHHHH
Q psy17999 118 SIEHVDNIYTTVKQ-YHSNLSILHCV----SAYPTPYPTVKQYHS-NLSI-----LHCVSAYPTPYHDINLNVIHTLRSR 186 (335)
Q Consensus 118 tl~Ei~~Av~~i~~-g~~~~~~~~c~----~g~~~~~~~~~~~~~-~l~l-----lHC~s~YP~~~~~~nL~~i~~L~~~ 186 (335)
+.+++.++++.+.+ |.. ..+.+- +|+.- |.+. ...+ .-..|. .+...++++.|..+++.
T Consensus 205 d~~~~~~~a~~~~~~Gg~--d~I~~~NT~~~g~~i------di~~~~~~~~~~~~~gGlSG--~~i~p~a~~~i~~v~~~ 274 (354)
T 4ef8_A 205 DFAHFDAAAEILNEFPKV--QFITCINSIGNGLVI------DAETESVVIKPKQGFGGLGG--RYVLPTALANINAFYRR 274 (354)
T ss_dssp SHHHHHHHHHHHHTCTTE--EEEEECCCEEEEECE------ETTTTEESCSGGGGEEEEEG--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCc--cEEEEecccCcceee------eccCCccccccccccCCCCC--CCCchHHHHHHHHHHHh
Confidence 89999999988876 312 111110 00000 0000 0000 011111 12234778999999998
Q ss_pred CCCCCeecCCCCCChHHHHHHHHcCCcEEEe--ccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 187 YPDIPIGYSGHENGVHVCYAAVAMGAQIIEK--HFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 187 fp~~pVG~SdHt~g~~~~~aAvalGA~vIEk--H~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
.+++||..++--....-+..++.+||+.+-- -+-- .| |.-++++.+.++..-...|-
T Consensus 275 ~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~----~G--------P~~~~~i~~~l~~~m~~~G~ 333 (354)
T 4ef8_A 275 CPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE----EG--------PSIFERLTSELLGVMAKKRY 333 (354)
T ss_dssp CTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHH----HC--------TTHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH----hC--------HHHHHHHHHHHHHHHHHcCC
Confidence 7789996555444455556677889996651 1111 13 44788888888877666663
No 160
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.17 E-value=7.2 Score=36.11 Aligned_cols=168 Identities=15% Similarity=0.075 Sum_probs=88.4
Q ss_pred CCCCcEEEeecccccccccccccCCCCCCCCCCcc-cHHHHHHhh--cCCHHHHHHHHHHHHH--cCCceEec----cC-
Q psy17999 1 ECGADCVKFQKSCLSTKFTQSALDRPYLSPHAWAN-TYGQHKQHL--EFSQEEYVMLQQCADQ--VDIMFTAS----AM- 70 (335)
Q Consensus 1 ~aGaDaVKFQ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--el~~e~~~~L~~~~~~--~Gi~f~st----pf- 70 (335)
++|||+|-++.- |++ |...|. .+....+-+ .++.++..++.+..++ ..++++.- |.
T Consensus 45 ~~GaD~iElGiP-----fSD---------P~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~ 110 (271)
T 3nav_A 45 DAGADALELGMP-----FSD---------PLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVY 110 (271)
T ss_dssp HTTCSSEEEECC-----CCC---------GGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHH
T ss_pred HcCCCEEEECCC-----CCC---------CCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 379999999984 222 211122 122222222 2666555544444444 46666442 21
Q ss_pred --C-hhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhcCCc-EEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCC
Q psy17999 71 --D-QVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAASKQKP-LIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAY 145 (335)
Q Consensus 71 --d-~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~gkP-vilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~ 145 (335)
. +.-++.+.+.|++.+-|+---.. -.++.+++.+.|.. |.|-+.-+ +.+.+..+.+. + .
T Consensus 111 ~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t-~~eri~~i~~~---~-~----------- 174 (271)
T 3nav_A 111 ARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTA-SDETLRAVAQL---G-K----------- 174 (271)
T ss_dssp HTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTC-CHHHHHHHHHH---C-C-----------
T ss_pred HHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCC-CHHHHHHHHHH---C-C-----------
Confidence 1 22356667789999888644332 34566667777875 55666666 77766665543 1 1
Q ss_pred CCCCCCcccccCceEEeeecCCCC-CCc-cCC---CchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 146 PTPYPTVKQYHSNLSILHCVSAYP-TPY-HDI---NLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 146 ~~~~~~~~~~~~~l~llHC~s~YP-~~~-~~~---nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+ +-|+|... |.. ... -...+..+|+.. ++||..-.--........+++.||+
T Consensus 175 ------------gf--iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gAD 232 (271)
T 3nav_A 175 ------------GY--TYLLSRAGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAA 232 (271)
T ss_dssp ------------SC--EEECCCC--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCS
T ss_pred ------------Ce--EEEEeccCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCC
Confidence 12 34444433 111 111 234577888877 8898542212124444447888987
No 161
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=89.09 E-value=1.3 Score=39.35 Aligned_cols=76 Identities=12% Similarity=-0.035 Sum_probs=52.4
Q ss_pred cCCHHHHHHHHHHHH-HcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCC--HHHHHHHHhcCCcEEEeCCCCCCHHH
Q psy17999 45 EFSQEEYVMLQQCAD-QVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNN--IPLIKYAASKQKPLIISTGMLPSIEH 121 (335)
Q Consensus 45 el~~e~~~~L~~~~~-~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n--~~LL~~~a~~gkPvilStG~~~tl~E 121 (335)
.+..+..+.|++.++ ..++.++... ..+-++.+.+.|+|.+.+....... ...++++.+.|+.++++.... |..|
T Consensus 50 ~~~~~~~~~lr~~~~~~~~v~lmv~d-~~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~-t~~e 127 (228)
T 1h1y_A 50 TIGAPVIQSLRKHTKAYLDCHLMVTN-PSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPG-TPVE 127 (228)
T ss_dssp CBCHHHHHHHHTTCCSEEEEEEESSC-GGGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTT-SCGG
T ss_pred hhCHHHHHHHHhhcCCcEEEEEEecC-HHHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCC-CCHH
Confidence 345677777877763 3454455532 1234788888999999888765443 567888888899999999776 5544
Q ss_pred H
Q psy17999 122 V 122 (335)
Q Consensus 122 i 122 (335)
.
T Consensus 128 ~ 128 (228)
T 1h1y_A 128 E 128 (228)
T ss_dssp G
T ss_pred H
Confidence 3
No 162
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=89.07 E-value=1.5 Score=41.23 Aligned_cols=75 Identities=9% Similarity=0.033 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
..+.+.++++|+.+..+ --+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 50 ~~~~~~~~~~~~~~~~~-----~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~ 124 (354)
T 3q2i_A 50 AALKAAVERTGARGHAS-----LTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK 124 (354)
T ss_dssp HHHHHHHHHHCCEEESC-----HHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceeCC-----HHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH
Confidence 34556677788744321 1244555679999999999999999999999999999999988899999998888776
No 163
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=88.99 E-value=1.4 Score=41.18 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.-.. .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 39 ~~~~~~~~~~~~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 39 RLREMKEKLGVEKAY-----KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp HHHHHHHHHTCSEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcee-----CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 345567778875222 123 44555579999999999999999999999999999999988899999999888776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 114 ~ 114 (344)
T 3ezy_A 114 A 114 (344)
T ss_dssp H
T ss_pred h
Confidence 3
No 164
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=88.95 E-value=1.4 Score=39.90 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHcC--CceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCC------cEEEeCCCCCCHH
Q psy17999 49 EEYVMLQQCADQVD--IMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQK------PLIISTGMLPSIE 120 (335)
Q Consensus 49 e~~~~L~~~~~~~G--i~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gk------PvilStG~~~tl~ 120 (335)
..+..+.+..++++ +.=.-|+.+.++++.+.+.|.+|+-.+. .|..+++++-+.+. |++= |.. |+.
T Consensus 50 ~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~---~~~evi~~~~~~~v~~~~~~~~~P--G~~-Tpt 123 (217)
T 3lab_A 50 AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG---LTPELIEKAKQVKLDGQWQGVFLP--GVA-TAS 123 (217)
T ss_dssp THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHHHHCSCCCEEEE--EEC-SHH
T ss_pred cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC---CcHHHHHHHHHcCCCccCCCeEeC--CCC-CHH
Confidence 34444444455443 2224589999999999999999997765 68999999999888 8876 777 999
Q ss_pred HHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCC-CchHHHHHHHHCCCCCee
Q psy17999 121 HVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDI-NLNVIHTLRSRYPDIPIG 193 (335)
Q Consensus 121 Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~-nL~~i~~L~~~fp~~pVG 193 (335)
|+..|.+. |.. ++ --||+. .+ .+..|..|+.-||++|+-
T Consensus 124 E~~~A~~~---Gad------------------------~v-----K~FPa~--~~gG~~~lkal~~p~p~i~~~ 163 (217)
T 3lab_A 124 EVMIAAQA---GIT------------------------QL-----KCFPAS--AIGGAKLLKAWSGPFPDIQFC 163 (217)
T ss_dssp HHHHHHHT---TCC------------------------EE-----EETTTT--TTTHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHc---CCC------------------------EE-----EECccc--cccCHHHHHHHHhhhcCceEE
Confidence 99998653 332 21 125653 23 478899999999988773
No 165
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=88.90 E-value=0.69 Score=42.77 Aligned_cols=71 Identities=14% Similarity=0.010 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCceEe--ccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTA--SAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~s--tpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~A 125 (335)
...+.+.++..+++++. .+.+.+.++.+.+.|+|.+ .++...+..++++++.+. +.++++. .. +.+|...+
T Consensus 67 ~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v-~~~~~~~~~~~~~~~~~~~~~i~l~~~--v~-~~~~~~~a 141 (297)
T 2zbt_A 67 PKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFI-DESEVLTPADEEHHIDKWKFKVPFVCG--AR-NLGEALRR 141 (297)
T ss_dssp HHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEE-EEETTSCCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEE-eeeCCCChHHHHHHHHHhCCCceEEee--cC-CHHHHHHH
Confidence 34566777888888875 3456788999999999999 666555555666666554 5566544 45 78886664
No 166
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=88.88 E-value=5.5 Score=36.30 Aligned_cols=164 Identities=10% Similarity=0.046 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHc--CCceEec-cCC-------hhhHHHHHhCCCCEEEEcCCCCCCH-HHHHHHHhcCCcEE-EeC
Q psy17999 46 FSQEEYVMLQQCADQV--DIMFTAS-AMD-------QVSFDFLLSANVPFIKIGSGDSNNI-PLIKYAASKQKPLI-IST 113 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~--Gi~f~st-pfd-------~~svd~l~~l~v~~~KIaS~d~~n~-~LL~~~a~~gkPvi-lSt 113 (335)
++.+....+.+..++. +++++.- .++ +.-++.+.+.|++.+-++.-..... .+++.+.+.|..+| +.+
T Consensus 76 ~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~ 155 (262)
T 2ekc_A 76 IRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGA 155 (262)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEEC
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 5555555555555544 7777773 222 2445667788999888874333222 23344445576543 344
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCcc-CCCchHHHHHHHHCCCCCe
Q psy17999 114 GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYH-DINLNVIHTLRSRYPDIPI 192 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~-~~nL~~i~~L~~~fp~~pV 192 (335)
.-+ +.+.+...++. . . .++.|.+- -.++...++.. .--...+..+|+.. ++||
T Consensus 156 p~t-~~~rl~~ia~~---a-~--gfiy~vs~------------------~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv 209 (262)
T 2ekc_A 156 PTS-TRKRIKLICEA---A-D--EMTYFVSV------------------TGTTGAREKLPYERIKKKVEEYRELC-DKPV 209 (262)
T ss_dssp TTC-CHHHHHHHHHH---C-S--SCEEEESS------------------CC---------CHHHHHHHHHHHHHC-CSCE
T ss_pred CCC-CHHHHHHHHHh---C-C--CCEEEEec------------------CCccCCCCCcCcccHHHHHHHHHhhc-CCCE
Confidence 434 55655554432 1 1 01111110 01333343332 22236788999988 8998
Q ss_pred ecCCCCCChHHHHHHHHcCCc--EE----EeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 193 GYSGHENGVHVCYAAVAMGAQ--II----EKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 193 G~SdHt~g~~~~~aAvalGA~--vI----EkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
....--..... .+++..||+ |+ -+++. . + .++.++++++.++.
T Consensus 210 ~vG~GI~t~e~-~~~~~~gADgvIVGSai~~~~~-----~--~-----~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 210 VVGFGVSKKEH-AREIGSFADGVVVGSALVKLAG-----Q--K-----KIEDLGNLVKELKE 258 (262)
T ss_dssp EEESSCCSHHH-HHHHHTTSSEEEECHHHHHHHH-----T--T-----CHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHH-HHHHHcCCCEEEECHHHHhhhh-----h--h-----hHHHHHHHHHHHHH
Confidence 43111111222 234777887 22 33321 0 1 46788888888864
No 167
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=88.76 E-value=0.96 Score=42.00 Aligned_cols=126 Identities=12% Similarity=0.091 Sum_probs=75.6
Q ss_pred HHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecC--------
Q psy17999 97 PLIKYAASK-QKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS-------- 166 (335)
Q Consensus 97 ~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s-------- 166 (335)
.+++++-+. ++||+++.....+.+++.+.++.+.. |.. +.+.+|.+.
T Consensus 150 ~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~-----------------------d~i~v~~~~~~~~~i~~ 206 (314)
T 2e6f_A 150 TYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLV-----------------------KFVTCVNSVGNGLVIDA 206 (314)
T ss_dssp HHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTE-----------------------EEEEECCCEEEEECEET
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCc-----------------------eEEEEeCCCCccccccC
Confidence 456666543 89999997655588888888887776 412 222222211
Q ss_pred --C------------CCC-CccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCC
Q psy17999 167 --A------------YPT-PYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHA 231 (335)
Q Consensus 167 --~------------YP~-~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~ 231 (335)
. |.- +.....+..+..+++..|++||.-++--....-+..++++||+.+-- -+..--
T Consensus 207 ~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~i----g~~~l~---- 278 (314)
T 2e6f_A 207 ESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQV----GTALQE---- 278 (314)
T ss_dssp TTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEE----CHHHHH----
T ss_pred CCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEE----chhhHh----
Confidence 0 000 01123478888999887789996655444455556677889995541 111100
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 232 SSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 232 ~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
-+|.-++++.+.++..-...|-
T Consensus 279 --~~p~~~~~i~~~l~~~~~~~g~ 300 (314)
T 2e6f_A 279 --EGPGIFTRLEDELLEIMARKGY 300 (314)
T ss_dssp --HCTTHHHHHHHHHHHHHHHHTC
T ss_pred --cCcHHHHHHHHHHHHHHHHcCC
Confidence 0245788888888776666664
No 168
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=88.45 E-value=2.3 Score=42.79 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHHcC-CceEe-ccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHH----hcCC
Q psy17999 47 SQEEYVMLQQCADQVD-IMFTA-SAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAA----SKQK 107 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G-i~f~s-tpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a----~~gk 107 (335)
+...+..+.+.+++++ +.++. .+-+.+.+..+.+.|+|+++++-+. ..++.+|..++ +.+.
T Consensus 281 ~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~i 360 (511)
T 3usb_A 281 SQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGI 360 (511)
T ss_dssp SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCC
Confidence 3445566666666664 66665 8889999999999999999984321 34566665543 2479
Q ss_pred cEEEeCCCCCCHHHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~ 127 (335)
|||.+-|.. +..++.+|+.
T Consensus 361 PVIa~GGI~-~~~di~kala 379 (511)
T 3usb_A 361 PVIADGGIK-YSGDMVKALA 379 (511)
T ss_dssp CEEEESCCC-SHHHHHHHHH
T ss_pred cEEEeCCCC-CHHHHHHHHH
Confidence 999999999 9999999865
No 169
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.28 E-value=11 Score=37.57 Aligned_cols=120 Identities=20% Similarity=0.291 Sum_probs=70.8
Q ss_pred ChhhHHHHHhCCCCEEEEcCCCCC---CHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCC
Q psy17999 71 DQVSFDFLLSANVPFIKIGSGDSN---NIPLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAY 145 (335)
Q Consensus 71 d~~svd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~ 145 (335)
..+.++.+.+.|+|++-|.+..-. .+.+++++.+. +.||+..+ .. +.++...+.+ .|-. .+.+ |.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~-v~-t~~~a~~l~~---aGad---~I~v--g~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGN-VV-TAAQAKNLID---AGVD---GLRV--GM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEE-EC-SHHHHHHHHH---HTCS---EEEE--CS
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecc-cc-hHHHHHHHHH---cCCC---EEEE--CC
Confidence 355677788899999999555322 25778888876 89998732 34 7777665544 2433 2222 11
Q ss_pred CCCCCCcccccCceEEeeecCCCCCCc---cCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcE
Q psy17999 146 PTPYPTVKQYHSNLSILHCVSAYPTPY---HDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 146 ~~~~~~~~~~~~~l~llHC~s~YP~~~---~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~v 214 (335)
-.+ -||++...... ...++..+..+++.+ ++||.-++=-....-...|+++||+.
T Consensus 326 ~~G-------------~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GAd~ 383 (514)
T 1jcn_A 326 GCG-------------SICITQEVMACGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGAST 383 (514)
T ss_dssp SCS-------------CCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CCC-------------cccccccccCCCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCCCe
Confidence 111 13433221111 123466677777777 89996554343345556788999983
No 170
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=88.17 E-value=2.1 Score=47.52 Aligned_cols=48 Identities=25% Similarity=0.436 Sum_probs=36.1
Q ss_pred CCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 167 AYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 167 ~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
.+=+|.+-.+| +..|++.+ ++||++=.|.. | ...+++|+..||++|+-
T Consensus 733 G~~~P~~~~~l--v~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 733 GLLKPAAAKVL--FKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp CCCCHHHHHHH--HHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCcCHHHHHHH--HHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 44445543333 78899999 89999987754 4 66679999999999984
No 171
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.03 E-value=1.5 Score=42.52 Aligned_cols=119 Identities=19% Similarity=0.120 Sum_probs=62.4
Q ss_pred hhhHHHHHhCCCCEEEEcCCCCC---CHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCC
Q psy17999 72 QVSFDFLLSANVPFIKIGSGDSN---NIPLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYP 146 (335)
Q Consensus 72 ~~svd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~ 146 (335)
.+.++.+.+.|++++-|.+..-+ .+.+++++.+. ++||++..+ . +.++...+.+ .|-. .+.+ |..
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v-~-~~~~a~~a~~---~Gad---~I~v--g~~ 224 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI-V-TKEAALDLIS---VGAD---CLKV--GIG 224 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE-C-SHHHHHHHHT---TTCS---EEEE--CSS
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC-C-cHHHHHHHHh---cCCC---EEEE--CCC
Confidence 44566677789999998433222 24556666665 899998433 3 6666655543 2422 2222 111
Q ss_pred CCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH---HCCCCCeecCCCCCChHHHHHHHHcCCcE
Q psy17999 147 TPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS---RYPDIPIGYSGHENGVHVCYAAVAMGAQI 214 (335)
Q Consensus 147 ~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~---~fp~~pVG~SdHt~g~~~~~aAvalGA~v 214 (335)
.+ .||.+.........++..+..+++ .. ++||.-++=-....-...|+++||+.
T Consensus 225 ~G-------------~~~~~~~~~~~g~p~~~~l~~v~~~~~~~-~ipVia~GGI~~~~d~~~ala~GAd~ 281 (404)
T 1eep_A 225 PG-------------SICTTRIVAGVGVPQITAICDVYEACNNT-NICIIADGGIRFSGDVVKAIAAGADS 281 (404)
T ss_dssp CS-------------TTSHHHHHHCCCCCHHHHHHHHHHHHTTS-SCEEEEESCCCSHHHHHHHHHHTCSE
T ss_pred CC-------------cCcCccccCCCCcchHHHHHHHHHHHhhc-CceEEEECCCCCHHHHHHHHHcCCCH
Confidence 00 033321100011124555666665 34 78885554333344555688899983
No 172
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=87.89 E-value=1.7 Score=37.57 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCCceEe---ccCCh-hhHHHHHhCCCCEEEEcCC------CCCCHHHHHHHHhc--CCcEEEeCCC
Q psy17999 48 QEEYVMLQQCADQVDIMFTA---SAMDQ-VSFDFLLSANVPFIKIGSG------DSNNIPLIKYAASK--QKPLIISTGM 115 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~s---tpfd~-~svd~l~~l~v~~~KIaS~------d~~n~~LL~~~a~~--gkPvilStG~ 115 (335)
.+...++.+.++++|+.++. +|.+. +.+..+.+.|++++.+..+ ...++.+++++.+. +.||+++-|.
T Consensus 89 ~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI 168 (211)
T 3f4w_A 89 VLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGI 168 (211)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSC
T ss_pred hhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCC
Confidence 46779999999999999874 46654 4467788899999987532 12468899988874 6888887776
Q ss_pred CCCHHHHHHH
Q psy17999 116 LPSIEHVDNI 125 (335)
Q Consensus 116 ~~tl~Ei~~A 125 (335)
+ .+.+..+
T Consensus 169 ~--~~~~~~~ 176 (211)
T 3f4w_A 169 S--SQTVKDY 176 (211)
T ss_dssp C--TTTHHHH
T ss_pred C--HHHHHHH
Confidence 5 4444443
No 173
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=87.89 E-value=2 Score=39.91 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=59.8
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.- .| .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 42 ~~~~~~~~~~~~~---~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~ 116 (330)
T 3e9m_A 42 NAQKMAKELAIPV---AY--GSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE 116 (330)
T ss_dssp HHHHHHHHTTCCC---CB--SSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCc---ee--CCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4556777888741 12 233 44555679999999999999999999999999999999988899999999888776
No 174
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=87.78 E-value=1.7 Score=42.04 Aligned_cols=76 Identities=9% Similarity=0.124 Sum_probs=59.5
Q ss_pred HHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC-------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHH
Q psy17999 51 YVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG-------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEH 121 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~-------d~~n~~LL~~~a~-~gkPvilStG~~~tl~E 121 (335)
|..+.+.++..+++++. .+.+.+.+..+.+.|+|+++|+.. ...++.+|.++.+ .+.|||.+-|.. +.++
T Consensus 214 ~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~-~~~d 292 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFR-RGSD 292 (380)
T ss_dssp HHHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCC-SHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCC-CHHH
Confidence 45666777778888874 568899999999999999999431 2334677777765 477999999999 9999
Q ss_pred HHHHHH
Q psy17999 122 VDNIYT 127 (335)
Q Consensus 122 i~~Av~ 127 (335)
+.+++.
T Consensus 293 v~kal~ 298 (380)
T 1p4c_A 293 IVKALA 298 (380)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998865
No 175
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.70 E-value=2.3 Score=42.12 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=66.9
Q ss_pred hhhHHHHHhCCCCEEEEcCCCCC---CHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCC
Q psy17999 72 QVSFDFLLSANVPFIKIGSGDSN---NIPLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYP 146 (335)
Q Consensus 72 ~~svd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~ 146 (335)
.+.++.+.+.|++++-|.+..-. .+..++++.+. ++||++..+ . +.++...+.+ .|-. .+.+..|
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~-~-t~e~a~~l~~---~G~d---~I~v~~~-- 308 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNV-A-TPEGTEALIK---AGAD---AVKVGVG-- 308 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEE-C-SHHHHHHHHH---TTCS---EEEECSS--
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCc-C-CHHHHHHHHH---cCCC---EEEEcCC--
Confidence 45678888899999999665432 45677777766 799999654 4 6777755543 2432 2222111
Q ss_pred CCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHH---CCCCCeecCCCCCChHHHHHHHHcCCcEE
Q psy17999 147 TPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSR---YPDIPIGYSGHENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 147 ~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~---fp~~pVG~SdHt~g~~~~~aAvalGA~vI 215 (335)
.+ -||++..-.......+..+..+++. + ++||.-++=-....-...|.++||+.+
T Consensus 309 ~G-------------~~~~~~~~~~~g~p~~~~l~~v~~~~~~~-~ipvia~GGI~~~~di~kala~GAd~V 366 (494)
T 1vrd_A 309 PG-------------SICTTRVVAGVGVPQLTAVMECSEVARKY-DVPIIADGGIRYSGDIVKALAAGAESV 366 (494)
T ss_dssp CS-------------TTCHHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred CC-------------ccccccccCCCCccHHHHHHHHHHHHhhc-CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 00 0222210000011223344444433 5 799966654444555667889999843
No 176
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=87.43 E-value=1.9 Score=40.18 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHc---CCceE-eccCChhhHHHHHhCCCCEEEE-----cCC-CCCCHHHHHHHHh-c-C-CcEEEeCCCC
Q psy17999 50 EYVMLQQCADQV---DIMFT-ASAMDQVSFDFLLSANVPFIKI-----GSG-DSNNIPLIKYAAS-K-Q-KPLIISTGML 116 (335)
Q Consensus 50 ~~~~L~~~~~~~---Gi~f~-stpfd~~svd~l~~l~v~~~KI-----aS~-d~~n~~LL~~~a~-~-g-kPvilStG~~ 116 (335)
+..++.+.|+.+ |+.++ -+.-|...+..++++|++++-- ||+ -+.|..+|+.+.+ . + .|||+.-|.+
T Consensus 109 D~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~ 188 (268)
T 2htm_A 109 DPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLG 188 (268)
T ss_dssp CHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCC
T ss_pred CHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCC
Confidence 456778888888 99988 3557888889999999998743 444 4778999999987 4 5 8999999999
Q ss_pred CCHHHHHHHHHH
Q psy17999 117 PSIEHVDNIYTT 128 (335)
Q Consensus 117 ~tl~Ei~~Av~~ 128 (335)
|.++...|++.
T Consensus 189 -tpsDAa~AmeL 199 (268)
T 2htm_A 189 -LPSHAAEVMEL 199 (268)
T ss_dssp -SHHHHHHHHHT
T ss_pred -CHHHHHHHHHc
Confidence 99999998763
No 177
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.43 E-value=19 Score=33.78 Aligned_cols=175 Identities=9% Similarity=0.025 Sum_probs=98.3
Q ss_pred HHHHHHHHHHH----HcCCceEeccCChhhHHHHHh--CCCCEEEEcCCCCCCH---HHHHHHHhcCCcEEEeC----CC
Q psy17999 49 EEYVMLQQCAD----QVDIMFTASAMDQVSFDFLLS--ANVPFIKIGSGDSNNI---PLIKYAASKQKPLIIST----GM 115 (335)
Q Consensus 49 e~~~~L~~~~~----~~Gi~f~stpfd~~svd~l~~--l~v~~~KIaS~d~~n~---~LL~~~a~~gkPvilSt----G~ 115 (335)
+++.++....+ ..++++...-++.+.++...+ .|.+++==-|+..... .++.-++++|.|||+.+ |+
T Consensus 67 eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~ 146 (300)
T 3k13_A 67 TEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQ 146 (300)
T ss_dssp HHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEE
T ss_pred HHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCC
Confidence 55666666654 468999999999999999888 6888876555554433 68888999999999874 55
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccC---CCc---hHHHHHHHHCCC
Q psy17999 116 LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHD---INL---NVIHTLRSRYPD 189 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~---~nL---~~i~~L~~~fp~ 189 (335)
.-|+++-....+.+... +.-+-|++. ++|++==.+..+-+..++ .|+ +.+..+++.||+
T Consensus 147 p~t~~~~~~i~~r~~~~------~~~~~Gi~~---------~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg 211 (300)
T 3k13_A 147 ADTAARKIEVCERAYRL------LVDKVGFNP---------HDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPG 211 (300)
T ss_dssp CCSHHHHHHHHHHHHHH------HHHHTCCCG---------GGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTT
T ss_pred CCCHHHHHHHHHHHHHH------HHHHcCCCH---------HHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCC
Confidence 54776643322221110 000112221 033321122223333322 244 455566667899
Q ss_pred CCe--ecCCCCCCh------------HHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy17999 190 IPI--GYSGHENGV------------HVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTG 245 (335)
Q Consensus 190 ~pV--G~SdHt~g~------------~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ 245 (335)
+|+ |.|==+.|. ....+|+..|.++.=-|..-. +-...+++ ++++++++
T Consensus 212 ~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn~~~~------~~~~~i~~-~~~~~~~~ 274 (300)
T 3k13_A 212 AHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVNPGTS------VLYSDIPA-DTLEKIED 274 (300)
T ss_dssp CEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEECCC-C------CCGGGSCH-HHHHHHHH
T ss_pred CCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCCEEecCcchh------hHHhhcCH-HHHHHHHH
Confidence 988 766444442 124568889998443333321 23344544 44555554
No 178
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=87.38 E-value=17 Score=34.61 Aligned_cols=135 Identities=15% Similarity=0.167 Sum_probs=81.9
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC----------CCCC-----------------H
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG----------DSNN-----------------I 96 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~----------d~~n-----------------~ 96 (335)
-+|+.++..++.+.=. +++..+.+.|.|.+.|..+ ..+| .
T Consensus 131 ~~mt~~eI~~ii~~f~-------------~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~ 197 (343)
T 3kru_A 131 RELSVEEIKSIVKAFG-------------EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLI 197 (343)
T ss_dssp EECCHHHHHHHHHHHH-------------HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHH
T ss_pred hhcCHHHHHHHHHHHH-------------HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHH
Confidence 3689888887765322 2445666778888888732 1222 4
Q ss_pred HHHHHHHhc---CCcEEEeCCC------CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCC
Q psy17999 97 PLIKYAASK---QKPLIISTGM------LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA 167 (335)
Q Consensus 97 ~LL~~~a~~---gkPvilStG~------~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~ 167 (335)
++++++.+. +.||.+.... +.+++|....++.+... - ..+.+..|. .
T Consensus 198 eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-v--d~i~vs~g~---------------------~ 253 (343)
T 3kru_A 198 EVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-V--DLIDVSSGG---------------------L 253 (343)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-C--SEEEEECCC---------------------S
T ss_pred HHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-c--cEEeccCCc---------------------e
Confidence 456666553 5699885432 12677777777766543 2 333332221 1
Q ss_pred CCCC---ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 168 YPTP---YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 168 YP~~---~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
++.+ ....++..+..+|+.+ ++||.-.+--.....+..++.-| |++|-
T Consensus 254 ~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 254 LNVDINLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp SCCCCCCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred EeeeecccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 1111 2346788899999999 89996555444566777788888 77554
No 179
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=87.37 E-value=2.1 Score=40.46 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=58.0
Q ss_pred HHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 57 CADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 57 ~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
.+++.|+.+. .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 45 ~a~~~g~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (359)
T 3e18_A 45 AAAQKGLKIY------ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRV 115 (359)
T ss_dssp HHHTTTCCBC------SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHhcCCcee------CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHh
Confidence 4567887543 233 455556799999999999999999999999999999999988999999999887763
No 180
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.35 E-value=2.6 Score=39.81 Aligned_cols=118 Identities=12% Similarity=0.129 Sum_probs=68.8
Q ss_pred CCCCcEEEeec---ccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEecc-------C
Q psy17999 1 ECGADCVKFQK---SCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASA-------M 70 (335)
Q Consensus 1 ~aGaDaVKFQ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stp-------f 70 (335)
++|+|+|+.-. |-.+.++++..- .....|+.+. .++.+|..|-.+.+++.+ ..-|.+=.++ +
T Consensus 155 ~aGfDgVeih~~~gyLl~qFlsp~~n----~R~d~yGGsl---enr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~ 226 (338)
T 1z41_A 155 EAGFDVIEIHAAHGYLIHEFLSPLSN----HRTDEYGGSP---ENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGL 226 (338)
T ss_dssp HTTCSEEEEEECTTSHHHHHHCTTTC----CCCSTTSSSH---HHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSC
T ss_pred HcCCCEEEeccccchHHHHccCCCcC----CcCcccCcch---hhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCC
Confidence 47999999765 222222222110 0011244432 344556666666666665 3333333344 3
Q ss_pred Chh----hHHHHHhCCCCEEEEcCCC----------CCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 71 DQV----SFDFLLSANVPFIKIGSGD----------SNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 71 d~~----svd~l~~l~v~~~KIaS~d----------~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+ -+..|++.|++++-|..+. -.++++++++.+ ++.|||..-|.. |.++.+++++
T Consensus 227 ~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~-s~~~a~~~l~ 297 (338)
T 1z41_A 227 DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMIT-DGSMAEEILQ 297 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCC-SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCC-CHHHHHHHHH
Confidence 332 2456677899999886542 236788888876 489999988888 8877776543
No 181
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=87.34 E-value=3.1 Score=36.21 Aligned_cols=86 Identities=10% Similarity=-0.004 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh--h----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ--V----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~--~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.|++.|..++....+. + .++.+.+.++|.+-+.+.+..+.+.++.+.+.|.|+++--....
T Consensus 19 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 98 (272)
T 3o74_A 19 RIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFC 98 (272)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCTTTCE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCCCccccC
Confidence 446677889999998877665442 2 24556667899999888775567889999999999876432110
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |+.
T Consensus 99 ~V~~d~~~~~~~a~~~L~~~G~~ 121 (272)
T 3o74_A 99 SVISDDRDASRQLAASLLSSAPR 121 (272)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCS
T ss_pred EEEEchHHHHHHHHHHHHHCCCc
Confidence 23345667777776 544
No 182
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.11 E-value=2 Score=39.91 Aligned_cols=81 Identities=12% Similarity=0.187 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHHHcCCc--eEeccCC-hhhHHHHHhCCCCEEEE-cC------CCCCC---HHHHHHHHh-cCCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVDIM--FTASAMD-QVSFDFLLSANVPFIKI-GS------GDSNN---IPLIKYAAS-KQKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~--f~stpfd-~~svd~l~~l~v~~~KI-aS------~d~~n---~~LL~~~a~-~gkPvil 111 (335)
|+.|+..++.++|+++|+. |+++|-+ .+-+..+.+....|+=. .. ..-.. ..+|+++.+ ++.||++
T Consensus 134 lp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 134 VPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp SCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 7888999999999999985 4667754 56677777776676554 22 11112 345666655 4789999
Q ss_pred eCCCCCCHHHHHHHHH
Q psy17999 112 STGMLPSIEHVDNIYT 127 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~ 127 (335)
..|.+ |.+++.+++.
T Consensus 214 GfGIs-t~e~~~~~~~ 228 (271)
T 3nav_A 214 GFGIS-EPAQVKQAIE 228 (271)
T ss_dssp CSSCC-SHHHHHHHHH
T ss_pred ECCCC-CHHHHHHHHH
Confidence 99999 9999987655
No 183
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=87.09 E-value=1.6 Score=40.69 Aligned_cols=76 Identities=14% Similarity=0.066 Sum_probs=60.2
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.. ..| .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 40 ~~~~~~~~~g~~~--~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~ 115 (344)
T 3mz0_A 40 AAQKVVEQYQLNA--TVY--PNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIK 115 (344)
T ss_dssp HHHHHHHHTTCCC--EEE--SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC--eee--CCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 4556777888521 112 133 44555679999999999999999999999999999999988899999999888776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 116 ~ 116 (344)
T 3mz0_A 116 V 116 (344)
T ss_dssp H
T ss_pred H
Confidence 3
No 184
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=87.03 E-value=3.7 Score=40.49 Aligned_cols=78 Identities=17% Similarity=0.170 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHc-CCceEe-ccCChhhHHHHHhCCCCEEEEcCC-------------CCCCHHHHHHHHh----cCCcE
Q psy17999 49 EEYVMLQQCADQV-DIMFTA-SAMDQVSFDFLLSANVPFIKIGSG-------------DSNNIPLIKYAAS----KQKPL 109 (335)
Q Consensus 49 e~~~~L~~~~~~~-Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~-------------d~~n~~LL~~~a~----~gkPv 109 (335)
..+..+.+.++.. +++++. .+.+.+.+..+.++|+++++++.+ ...+...+..++. .+.||
T Consensus 260 ~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 260 GVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCE
Confidence 4555666666666 666552 345677888888999999999731 3556777777775 68999
Q ss_pred EEeCCCCCCHHHHHHHHH
Q psy17999 110 IISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 110 ilStG~~~tl~Ei~~Av~ 127 (335)
|.+-|.. +..++.+|+.
T Consensus 340 ia~GGi~-~~~di~kal~ 356 (491)
T 1zfj_A 340 IADGGIK-YSGDIVKALA 356 (491)
T ss_dssp EEESCCC-SHHHHHHHHH
T ss_pred EeeCCCC-CHHHHHHHHH
Confidence 9999999 9999999875
No 185
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.02 E-value=5.2 Score=35.44 Aligned_cols=132 Identities=5% Similarity=-0.029 Sum_probs=78.4
Q ss_pred HHHHHHHHHHcCCceEeccC-C-------hhhHHHHHhCCCCEEEEcCCCCCCHH-HHHHHHhcCCcEEEeCCCCCCHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAM-D-------QVSFDFLLSANVPFIKIGSGDSNNIP-LIKYAASKQKPLIISTGMLPSIEH 121 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpf-d-------~~svd~l~~l~v~~~KIaS~d~~n~~-LL~~~a~~gkPvilStG~~~tl~E 121 (335)
+..+.+..+..++++..-.+ + .+.++.+.+.|++++-+++-...+.. +++.+.+.|..+++..... |..|
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-t~~e 147 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPN-TPDE 147 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTT-CCHH
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCC-CHHH
Confidence 33444444445666555443 4 36788888999999999976665654 4455666788888866665 6666
Q ss_pred HHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCC------CCccCCCchHHHHHHHHCCCCCeecC
Q psy17999 122 VDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYP------TPYHDINLNVIHTLRSRYPDIPIGYS 195 (335)
Q Consensus 122 i~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP------~~~~~~nL~~i~~L~~~fp~~pVG~S 195 (335)
...++.. +.. . ++++.+. | ++....++..+..+++.. ++||..+
T Consensus 148 ~~~~~~~---~~d-----------------------~--~i~~~~~-~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~ 197 (248)
T 1geq_A 148 RLKVIDD---MTT-----------------------G--FVYLVSL-YGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVG 197 (248)
T ss_dssp HHHHHHH---HCS-----------------------S--EEEEECC-C-------CCCHHHHHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHh---cCC-----------------------C--eEEEEEC-CccCCCCCCCChhHHHHHHHHHhhc-CCCEEEE
Confidence 5554332 211 1 2233332 2 111123577889999988 8998655
Q ss_pred CCCCChHHHHHHHHcCCc
Q psy17999 196 GHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 196 dHt~g~~~~~aAvalGA~ 213 (335)
+--....-.......||+
T Consensus 198 GGI~~~e~i~~~~~~Gad 215 (248)
T 1geq_A 198 FGVSKREHVVSLLKEGAN 215 (248)
T ss_dssp SCCCSHHHHHHHHHTTCS
T ss_pred eecCCHHHHHHHHHcCCC
Confidence 433333444445578998
No 186
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=86.95 E-value=3.2 Score=40.45 Aligned_cols=85 Identities=9% Similarity=-0.095 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCC--hhhHHHH-HhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMD--QVSFDFL-LSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd--~~svd~l-~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
+.+....+.+...++|+.- ...|+ ..+.+.+ .+-++|++-|++..-.+.++..++.+.||+|++...++.|++|.+
T Consensus 54 ~~~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~ 132 (444)
T 2ixa_A 54 DPYMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECW 132 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHH
Confidence 4555666666565677521 11222 3345444 445799999999999999999999999999999999888999999
Q ss_pred HHHHHHHhc
Q psy17999 124 NIYTTVKQY 132 (335)
Q Consensus 124 ~Av~~i~~g 132 (335)
+.++..++.
T Consensus 133 ~l~~~a~~~ 141 (444)
T 2ixa_A 133 DYVKVSEQT 141 (444)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888763
No 187
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=86.94 E-value=1.9 Score=40.43 Aligned_cols=57 Identities=11% Similarity=0.237 Sum_probs=50.8
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 61 ~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~ 117 (352)
T 3kux_A 61 MLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDA 117 (352)
T ss_dssp HHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHc
Confidence 445556799999999999999999999999999999999888999999998887763
No 188
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=86.94 E-value=17 Score=33.69 Aligned_cols=152 Identities=18% Similarity=0.183 Sum_probs=98.9
Q ss_pred hcCCHHHHHHHHHHHHHc----CCceEeccCC---hhhH---HHHHhCCCCEEEEcCCC---CCCHHHHHH---HHh-cC
Q psy17999 44 LEFSQEEYVMLQQCADQV----DIMFTASAMD---QVSF---DFLLSANVPFIKIGSGD---SNNIPLIKY---AAS-KQ 106 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~----Gi~f~stpfd---~~sv---d~l~~l~v~~~KIaS~d---~~n~~LL~~---~a~-~g 106 (335)
..|+.++..++.+.+.+. .+++++-+-+ .+++ ..++++|+|.+-+-..- .+.-.++++ +|+ ++
T Consensus 55 ~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 55 ATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 458999999999888765 4888876643 2333 35567899998776543 334455544 444 69
Q ss_pred CcEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHH
Q psy17999 107 KPLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIH 181 (335)
Q Consensus 107 kPvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~ 181 (335)
+||+|= ||..++.+.+.+.++.+ + +++-+-- ..-|+..+.
T Consensus 135 lPiilYn~P~~tg~~l~~~~~~~La~~~----p-----------------------nivgiKd--------ssgd~~~~~ 179 (301)
T 3m5v_A 135 IPVLLYNVPGRTGCEISTDTIIKLFRDC----E-----------------------NIYGVKE--------ASGNIDKCV 179 (301)
T ss_dssp SCEEEEECHHHHSCCCCHHHHHHHHHHC----T-----------------------TEEEEEE--------CSSCHHHHH
T ss_pred CCEEEEeCchhhCcCCCHHHHHHHHhcC----C-----------------------CEEEEEe--------CCCCHHHHH
Confidence 999985 79888888888765421 2 2322221 124777888
Q ss_pred HHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 182 TLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 182 ~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
.+++.+++..| ||++.. ....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 180 ~~~~~~~~f~v-~~G~d~---~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~ 229 (301)
T 3m5v_A 180 DLLAHEPRMML-ISGEDA---INYPILSNGGKGVIS-------------VTSNLLPDMISALTHFAL 229 (301)
T ss_dssp HHHHHCTTSEE-EECCGG---GHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHhCCCeEE-EEccHH---HHHHHHHcCCCEEEe-------------hHHHhhHHHHHHHHHHHH
Confidence 88777656655 776532 34557788998 552 223466888888887654
No 189
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=86.89 E-value=1.4 Score=41.62 Aligned_cols=76 Identities=11% Similarity=0.134 Sum_probs=59.5
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+.. ..| .+. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 61 ~~~~~a~~~g~~~--~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~ 136 (357)
T 3ec7_A 61 RAQAALDKYAIEA--KDY--NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQK 136 (357)
T ss_dssp HHHHHHHHHTCCC--EEE--SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC--eee--CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHH
Confidence 3456677778521 111 133 34555579999999999999999999999999999999998899999999988776
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 137 ~ 137 (357)
T 3ec7_A 137 N 137 (357)
T ss_dssp H
T ss_pred h
Confidence 3
No 190
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=86.82 E-value=8.7 Score=36.75 Aligned_cols=171 Identities=14% Similarity=0.156 Sum_probs=94.3
Q ss_pred HcCCceEeccCC--hhh----HHHHHhCCCC-EEEEc--C------CCC-CCHHHHHHHHh-----cCCcEEEeCCCCCC
Q psy17999 60 QVDIMFTASAMD--QVS----FDFLLSANVP-FIKIG--S------GDS-NNIPLIKYAAS-----KQKPLIISTGMLPS 118 (335)
Q Consensus 60 ~~Gi~f~stpfd--~~s----vd~l~~l~v~-~~KIa--S------~d~-~n~~LL~~~a~-----~gkPvilStG~~~t 118 (335)
..+.+++.+.+. .+. +..+++.+.+ +|-|- + ..+ .+.+++.++-+ +++||+++.....+
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~ 205 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFD 205 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCC
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 467777777764 222 3334444655 65543 2 123 56666655443 47999999876558
Q ss_pred HHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC----------CCC-CCccCCCchHHHHHHHHC
Q psy17999 119 IEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS----------AYP-TPYHDINLNVIHTLRSRY 187 (335)
Q Consensus 119 l~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s----------~YP-~~~~~~nL~~i~~L~~~f 187 (335)
..|+.++++.... ..+.++-+-..+ + .-..+|--. .|= .+...+.++.|..+++..
T Consensus 206 ~~~~a~~~~~aga--~~i~~int~nt~--g---------~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~ 272 (345)
T 3oix_A 206 IVHFDQAAAIFNX--YPLTFVNCINSI--G---------NGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRL 272 (345)
T ss_dssp HHHHHHHHHHHTT--SCCSEEEECCCE--E---------EEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhCC--CceEEEEeeccc--c---------cceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHc
Confidence 8888888776543 211111000000 0 000012000 000 111234578899999988
Q ss_pred C-CCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 188 P-DIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKS--WKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 188 p-~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~--~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
+ ++||.-++--....-+..++..||+.+-- -+. .. +|.-++++.+.++..-...|-
T Consensus 273 ~~~ipIIg~GGI~s~~da~~~l~aGAd~V~i----gra~~~~--------gP~~~~~i~~~L~~~l~~~G~ 331 (345)
T 3oix_A 273 NPSIQIIGTGGVXTGRDAFEHILCGASMVQI----GTALHQE--------GPQIFKRITKELXAIMTEKGY 331 (345)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHHTCSEEEE----SHHHHHH--------CTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEECCCCChHHHHHHHHhCCCEEEE----ChHHHhc--------ChHHHHHHHHHHHHHHHHcCC
Confidence 5 68985555444456666677899996652 122 12 466888888888877666663
No 191
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=86.74 E-value=2.3 Score=39.39 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=57.3
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
.+.+.++++|+....+ +. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 46 ~~~~~a~~~g~~~~~~-----~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~ 120 (346)
T 3cea_A 46 QLEWAKNELGVETTYT-----NYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKS 120 (346)
T ss_dssp HHHHHHHTTCCSEEES-----CHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcccC-----CHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 3456677888742211 23 34444579999999999999999999999999999988777799998888777664
Q ss_pred c
Q psy17999 132 Y 132 (335)
Q Consensus 132 g 132 (335)
.
T Consensus 121 ~ 121 (346)
T 3cea_A 121 H 121 (346)
T ss_dssp C
T ss_pred C
Confidence 4
No 192
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=86.74 E-value=4.5 Score=38.55 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHH-cCCceEe--c-cCCh--------hhHHHHHhCCCCEEEEcCCCC--------------CCHHHHHHH
Q psy17999 49 EEYVMLQQCADQ-VDIMFTA--S-AMDQ--------VSFDFLLSANVPFIKIGSGDS--------------NNIPLIKYA 102 (335)
Q Consensus 49 e~~~~L~~~~~~-~Gi~f~s--t-pfd~--------~svd~l~~l~v~~~KIaS~d~--------------~n~~LL~~~ 102 (335)
+...++.+..++ .+++++. . -++. +-+..+++.|++++-|..+.- .++++++++
T Consensus 112 ~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~i 191 (350)
T 3b0p_A 112 ARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRL 191 (350)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHH
Confidence 334433333333 4777776 2 2331 224667789999999987642 379999998
Q ss_pred Hhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 103 ASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 103 a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.+. +.|||.+-|.. |.+++.++++
T Consensus 192 k~~~~~iPVianGgI~-s~eda~~~l~ 217 (350)
T 3b0p_A 192 KGDFPQLTFVTNGGIR-SLEEALFHLK 217 (350)
T ss_dssp HHHCTTSEEEEESSCC-SHHHHHHHHT
T ss_pred HHhCCCCeEEEECCcC-CHHHHHHHHh
Confidence 874 79999999999 9999888764
No 193
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=86.71 E-value=2.1 Score=40.31 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=59.4
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.++++|+......++ +. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+.+|.++.++..++
T Consensus 43 ~~~~~a~~~~~~~~~~~~~--~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~ 120 (362)
T 1ydw_A 43 KAKAFATANNYPESTKIHG--SYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEA 120 (362)
T ss_dssp HHHHHHHHTTCCTTCEEES--SHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeeeC--CHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHH
Confidence 3456778888621111222 33 34455579999999999999999999999999999999988899999998887776
No 194
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.68 E-value=3.5 Score=39.87 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHcCCceEec-c---CChhhHHHHHhCCCCEEEEcCCCCC-----------------C-----HHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTAS-A---MDQVSFDFLLSANVPFIKIGSGDSN-----------------N-----IPLIKYA 102 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~st-p---fd~~svd~l~~l~v~~~KIaS~d~~-----------------n-----~~LL~~~ 102 (335)
.+...+.+.++..+++++.- + .+.+.+..+.+.|+|++.|+..-=+ + ...|..+
T Consensus 193 ~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v 272 (365)
T 3sr7_A 193 SWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNA 272 (365)
T ss_dssp HHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHH
Confidence 34567888888889998887 5 7889999999999999999543111 1 1344555
Q ss_pred Hhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 103 ASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 103 a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
... +.|||.+-|.. +-.++.+|+.
T Consensus 273 ~~~~~~ipvia~GGI~-~g~Dv~KaLa 298 (365)
T 3sr7_A 273 QPLMDKVEILASGGIR-HPLDIIKALV 298 (365)
T ss_dssp GGGTTTSEEEECSSCC-SHHHHHHHHH
T ss_pred HHhcCCCeEEEeCCCC-CHHHHHHHHH
Confidence 444 67999999999 9999998876
No 195
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=86.65 E-value=2.2 Score=39.58 Aligned_cols=72 Identities=14% Similarity=0.099 Sum_probs=59.3
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
...+.+++.|+. . .+. +++.+-++|++-|++.+-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 40 ~~~~~~~~~~~~-~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~ 112 (331)
T 4hkt_A 40 AAEAIAGAYGCE-V------RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD 112 (331)
T ss_dssp HHHHHHHHTTCE-E------CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-c------CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 355667778886 2 233 34555579999999999999999999999999999999988899999999888776
No 196
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=86.46 E-value=20 Score=33.02 Aligned_cols=152 Identities=14% Similarity=0.109 Sum_probs=97.5
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCCC---CCHHHHH---HHHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGDS---NNIPLIK---YAAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d~---~n~~LL~---~~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-+ .++++ .++++|+|.+-+.+.-. +.-.+++ ++|+ +++
T Consensus 48 ~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 127 (292)
T 2vc6_A 48 PTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTI 127 (292)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 469999999999888763 4777766544 34444 45678999987766533 4455555 4554 689
Q ss_pred cEEE-----eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLII-----STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 Pvil-----StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
|||| -||..++.+.+.+.++- .+ +++-+-= ..-|+..+..
T Consensus 128 PiilYn~P~~tg~~l~~~~~~~La~~----~p-----------------------nIvgiK~--------s~gd~~~~~~ 172 (292)
T 2vc6_A 128 PIIVYNIPGRSAIEIHVETLARIFED----CP-----------------------NVKGVXD--------ATGNLLRPSL 172 (292)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHH----CT-----------------------TEEEEEE--------CSCCTHHHHH
T ss_pred CEEEEeCccccCcCCCHHHHHHHHhh----CC-----------------------CEEEEec--------CCCCHHHHHH
Confidence 9999 48987788888776531 12 2322221 1246778888
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+++.+| ++.| ||++. .....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 173 ~~~~~~~~f~v-~~G~d---~~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~ 222 (292)
T 2vc6_A 173 ERMACGEDFNL-LTGED---GTALGYMAHGGHGCIS-------------VTANVAPALCADFQQACL 222 (292)
T ss_dssp HHHHSCTTSEE-EESCG---GGHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHcCCCEEE-EECch---HHHHHHHHcCCCEEEe-------------cHHHhCHHHHHHHHHHHH
Confidence 887774 4444 77643 234557789998 554 223356888888876554
No 197
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=86.37 E-value=1.8 Score=40.86 Aligned_cols=57 Identities=5% Similarity=0.091 Sum_probs=51.2
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++.
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 59 EITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp HHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 455556799999999999999999999999999999999988999999999887763
No 198
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=86.20 E-value=3.6 Score=39.61 Aligned_cols=79 Identities=11% Similarity=0.179 Sum_probs=59.5
Q ss_pred cCCHHHHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcC---C----CCCCHHHHHHHHhc---CCcEEEeC
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGS---G----DSNNIPLIKYAASK---QKPLIIST 113 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS---~----d~~n~~LL~~~a~~---gkPvilSt 113 (335)
.++++.+++|+ +..+++++. .+.+.+.+..+.+.|+|+|.|.. + -...+.+|.++.+. +.|||.+-
T Consensus 215 ~~~~~~i~~lr---~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~G 291 (368)
T 2nli_A 215 KISPRDIEEIA---GHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDS 291 (368)
T ss_dssp BCCHHHHHHHH---HHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECS
T ss_pred hhhHHHHHHHH---HHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEEC
Confidence 45655555444 456777765 56888999999999999999943 1 23456777777653 68999999
Q ss_pred CCCCCHHHHHHHHH
Q psy17999 114 GMLPSIEHVDNIYT 127 (335)
Q Consensus 114 G~~~tl~Ei~~Av~ 127 (335)
|.. +-+++.+|+.
T Consensus 292 GI~-~g~D~~kala 304 (368)
T 2nli_A 292 GVR-RGEHVAKALA 304 (368)
T ss_dssp SCC-SHHHHHHHHH
T ss_pred CCC-CHHHHHHHHH
Confidence 999 9999998865
No 199
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=85.87 E-value=2.3 Score=39.51 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCceEeccCC--hhhHHHHHhCCCCEEEEcCCCCCCHHHHHHH--HhcCCcEEEeCCCCCCHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMD--QVSFDFLLSANVPFIKIGSGDSNNIPLIKYA--ASKQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd--~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~--a~~gkPvilStG~~~tl~Ei~~Av 126 (335)
..+.+.++..+++++.-.+. .+.++.+.+.|+|++- .+..++...+.+.+ -+.|.|++++. . +++|...++
T Consensus 68 ~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~-~~~~l~~~~~~~~i~~~~~g~~v~~~~--~-~~~e~~~a~ 142 (305)
T 2nv1_A 68 TIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID-ESEVLTPADEEFHLNKNEYTVPFVCGC--R-DLGEATRRI 142 (305)
T ss_dssp HHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEE-ECTTSCCSCSSCCCCGGGCSSCEEEEE--S-SHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEE-EeccCCHHHHHHHHHHhccCCcEEEEe--C-CHHHHHHHH
Confidence 34455567789998876555 6778888889999994 55555433322222 24588888866 4 788777664
No 200
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=85.77 E-value=2.2 Score=39.70 Aligned_cols=73 Identities=22% Similarity=0.183 Sum_probs=58.9
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
.+.+.++++|+.+.. +. +++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 41 ~~~~~a~~~g~~~~~------~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~ 114 (344)
T 3euw_A 41 GAQRLAEANGAEAVA------SPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD 114 (344)
T ss_dssp HHHHHHHTTTCEEES------SHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCceeC------CHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh
Confidence 345567777854432 33 34444679999999999999999999999999999999988899999998888776
No 201
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=85.66 E-value=2.3 Score=36.94 Aligned_cols=72 Identities=13% Similarity=0.012 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-C--CcEEEeCCCCCCHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-Q--KPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-g--kPvilStG~~~tl~Ei~~A 125 (335)
..+.+.++++|+.++..+.+.+.+....+.|+|++++-.++...+.+++++.+. + .||+.+-|.+ .+.+..+
T Consensus 91 ~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~~~ipvia~GGI~--~~~i~~~ 165 (212)
T 2v82_A 91 SEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVT--PENLAQW 165 (212)
T ss_dssp HHHHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSCTTCEEEEESSCC--TTTHHHH
T ss_pred HHHHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhccCCCeEEEeCCCC--HHHHHHH
Confidence 346688999999988888888888877889999999843333457888888764 3 7888877765 4555544
No 202
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=85.64 E-value=2.2 Score=38.56 Aligned_cols=82 Identities=17% Similarity=0.090 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHcCC------ceEeccCChhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhc--CCcEEEeCCCCC
Q psy17999 47 SQEEYVMLQQCADQVDI------MFTASAMDQVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAASK--QKPLIISTGMLP 117 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi------~f~stpfd~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~--gkPvilStG~~~ 117 (335)
+...-.++.++|+++|+ .++--++++..+....++|+|++|+-..+.. ...+|+.+..- +.| ++-||+=
T Consensus 91 sP~~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~-~~ptGGI- 168 (217)
T 3lab_A 91 SPGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQ-FCPTGGI- 168 (217)
T ss_dssp ESSCCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCE-EEEBSSC-
T ss_pred eCCCcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHhhhcCce-EEEeCCC-
Confidence 33445688999999999 9999999999999999999999999887755 58999998863 344 5577766
Q ss_pred CHHHHHHHHHHHHhcC
Q psy17999 118 SIEHVDNIYTTVKQYH 133 (335)
Q Consensus 118 tl~Ei~~Av~~i~~g~ 133 (335)
+++ ++-+++..|+
T Consensus 169 ~~~---N~~~~l~aGa 181 (217)
T 3lab_A 169 SKD---NYKEYLGLPN 181 (217)
T ss_dssp CTT---THHHHHHSTT
T ss_pred CHH---HHHHHHHCCC
Confidence 654 4556665553
No 203
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.60 E-value=11 Score=40.93 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=46.4
Q ss_pred chHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Q psy17999 177 LNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLG 254 (335)
Q Consensus 177 L~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG 254 (335)
+..+..+++.+|++||.-++--....-+..++++||+.+- +-+.- .+ |.-+..+.+.++..-...|
T Consensus 775 ~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~----~~--------~~~~~~~~~~l~~~l~~~G 842 (1025)
T 1gte_A 775 LRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN----QD--------FTVIQDYCTGLKALLYLKS 842 (1025)
T ss_dssp HHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT----SC--------TTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc----CC--------ccHHHHHHHHHHHHHHHcC
Confidence 5688899988888999666655556666678889999544 21111 12 3477888888887777766
Q ss_pred C
Q psy17999 255 S 255 (335)
Q Consensus 255 ~ 255 (335)
-
T Consensus 843 ~ 843 (1025)
T 1gte_A 843 I 843 (1025)
T ss_dssp C
T ss_pred C
Confidence 4
No 204
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=85.51 E-value=2.7 Score=38.67 Aligned_cols=69 Identities=9% Similarity=0.172 Sum_probs=55.0
Q ss_pred HHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 56 QCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 56 ~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
+.++++|+.+ ++ +.+.+ .-++|++-|++..-.+.+++.++.+.||+|++...++.+.+|.++.++..++
T Consensus 46 ~~~~~~g~~~----~~--~~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~ 114 (319)
T 1tlt_A 46 PICESWRIPY----AD--SLSSL-AASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAAR 114 (319)
T ss_dssp HHHHHHTCCB----CS--SHHHH-HTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCc----cC--cHHHh-hcCCCEEEEeCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4566778762 22 23344 4469999999999999999999999999999998877799999988887765
No 205
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=85.42 E-value=7.2 Score=34.68 Aligned_cols=85 Identities=7% Similarity=0.040 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh-----hhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC-CC-C----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ-----VSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG-ML-P---- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~-----~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG-~~-~---- 117 (335)
+-+..+.+.|++.|..++....+. ..++.+.+.++|.+-+.+.+... +.++.+.+.+.||++--. .. .
T Consensus 27 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~ 105 (294)
T 3qk7_A 27 EMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRSHLPKPYAW 105 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCCCCSSCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCCCCCCCCCE
Confidence 446677889999998877655442 23566677789999998888766 889999999999876422 11 0
Q ss_pred ----CHHHHHHHHHHHHh-cCC
Q psy17999 118 ----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 ----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 106 V~~D~~~~~~~a~~~L~~~G~~ 127 (294)
T 3qk7_A 106 FDFDNHAGASLAVKRLLELGHQ 127 (294)
T ss_dssp EEECHHHHHHHHHHHHHHTTCC
T ss_pred EEcChHHHHHHHHHHHHHCCCc
Confidence 23445667777776 555
No 206
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=85.42 E-value=1.6 Score=40.90 Aligned_cols=57 Identities=18% Similarity=0.326 Sum_probs=50.7
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.++..++.+.||+|++...++.|++|.++.++..++.
T Consensus 59 ~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (349)
T 3i23_A 59 ELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEK 115 (349)
T ss_dssp HHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHc
Confidence 445555799999999999999999999999999999999988999999998887763
No 207
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=85.36 E-value=1.4 Score=40.50 Aligned_cols=59 Identities=19% Similarity=0.179 Sum_probs=51.4
Q ss_pred hHH-HHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 74 SFD-FLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 74 svd-~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+.+ ++.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++.
T Consensus 56 ~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 115 (294)
T 1lc0_A 56 SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQK 115 (294)
T ss_dssp CHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHT
T ss_pred CHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 444 44556799999999999999999999999999999999888999999999887763
No 208
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=85.33 E-value=9.3 Score=33.79 Aligned_cols=85 Identities=8% Similarity=-0.026 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHcCCceEeccC--Ch----h---hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC--
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM--DQ----V---SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP-- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf--d~----~---svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~-- 117 (335)
+-+..+.+.|++.|..++.... |. + .++.+.+.++|.+-+.+.+.. .+.++.+.+.+.|+++--....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~ 103 (290)
T 2rgy_A 25 TILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRAFDAL 103 (290)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSCCTTS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccccCCC
Confidence 4466778889999987765433 32 1 455566678999998877665 5788888888999876422110
Q ss_pred --------CHHHHHHHHHHHHh-cCC
Q psy17999 118 --------SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 --------tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 104 ~~~~V~~D~~~~g~~a~~~L~~~G~~ 129 (290)
T 2rgy_A 104 PDASFCPDHRRGGELAAATLIEHGHR 129 (290)
T ss_dssp GGGEECCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEeCcHHHHHHHHHHHHHCCCc
Confidence 12334567777766 544
No 209
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=85.33 E-value=11 Score=33.14 Aligned_cols=85 Identities=11% Similarity=0.076 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHcCCceEeccCChh------hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCC----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQV------SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPS---- 118 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~------svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~t---- 118 (335)
+-+..+.+.+++.|..++....+.. .++.+.+.++|.+-+.+.+..+ +.++.+.+.|.||++--.....
T Consensus 30 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~ 108 (292)
T 3k4h_A 30 EVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-RIIQYLHEQNFPFVLIGKPYDRKDEI 108 (292)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC-HHHHHHHHTTCCEEEESCCSSCTTTS
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHHCCCCEEEECCCCCCCCCC
Confidence 4466788899999998887654432 2445556789999998777665 7889999999998864332101
Q ss_pred -------HHHHHHHHHHHHh-cCC
Q psy17999 119 -------IEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 119 -------l~Ei~~Av~~i~~-g~~ 134 (335)
.+-...|++++.+ |..
T Consensus 109 ~~V~~D~~~~g~~a~~~L~~~G~~ 132 (292)
T 3k4h_A 109 TYVDNDNYTAAREVAEYLISLGHK 132 (292)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCC
T ss_pred CEEEECcHHHHHHHHHHHHHCCCc
Confidence 2235567777776 554
No 210
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.32 E-value=17 Score=32.59 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=64.4
Q ss_pred hhhHHHHHhCCCCEE--EEcCCCCCCHH-------HHHHHHhcCCcEEEeCC---C-----CCCHHHHHHHHHHHHhcCC
Q psy17999 72 QVSFDFLLSANVPFI--KIGSGDSNNIP-------LIKYAASKQKPLIISTG---M-----LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 72 ~~svd~l~~l~v~~~--KIaS~d~~n~~-------LL~~~a~~gkPvilStG---~-----~~tl~Ei~~Av~~i~~g~~ 134 (335)
.+.++.+.+.|++.+ .+--+....-. +.+.+.+.|.|+|+.++ . . +.+++..+++...+.+.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~-~~~~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNER-DPELVAHAARLGAELGA 180 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCC-CHhHHHHHHHHHHHcCC
Confidence 566777888888888 54333333222 23333345889888762 1 3 56777777665555222
Q ss_pred CCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCee-cCCCCCC-hH----HHHHHH
Q psy17999 135 NLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIG-YSGHENG-VH----VCYAAV 208 (335)
Q Consensus 135 ~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG-~SdHt~g-~~----~~~aAv 208 (335)
+++..+ || .++..+..+++.. ++||. .++-... .. ....+.
T Consensus 181 -----------------------d~i~~~----~~-----~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~ 227 (273)
T 2qjg_A 181 -----------------------DIVKTS----YT-----GDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAM 227 (273)
T ss_dssp -----------------------SEEEEC----CC-----SSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred -----------------------CEEEEC----CC-----CCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 444444 43 6788899999888 78983 3443332 22 244556
Q ss_pred HcCCc
Q psy17999 209 AMGAQ 213 (335)
Q Consensus 209 alGA~ 213 (335)
..||+
T Consensus 228 ~~Ga~ 232 (273)
T 2qjg_A 228 EAGAA 232 (273)
T ss_dssp HHTCS
T ss_pred HcCCc
Confidence 78997
No 211
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.08 E-value=9.8 Score=37.54 Aligned_cols=51 Identities=27% Similarity=0.387 Sum_probs=36.2
Q ss_pred CCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcEEEeccCCC
Q psy17999 167 AYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQIIEKHFTLD 222 (335)
Q Consensus 167 ~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~vIEkH~tld 222 (335)
.+=+|.+-.+ .+..|++++ +++|++-.|.. | ...+++|+..||+.|+ .|+.
T Consensus 204 G~~~P~~v~~--lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd--~ti~ 257 (423)
T 3ivs_A 204 GCATPRQVYD--LIRTLRGVV-SCDIECHFHNDTGMAIANAYCALEAGATHID--TSIL 257 (423)
T ss_dssp SCCCHHHHHH--HHHHHHHHC-SSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE--EBGG
T ss_pred CcCCHHHHHH--HHHHHHhhc-CCeEEEEECCCCchHHHHHHHHHHhCCCEEE--Eecc
Confidence 4444543333 367888887 79999877753 4 6667999999999999 4554
No 212
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=85.01 E-value=6.6 Score=35.44 Aligned_cols=122 Identities=15% Similarity=0.200 Sum_probs=78.1
Q ss_pred HHHHHHHHHHcCCceEe--ccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-C-CcEEEe------------CC
Q psy17999 51 YVMLQQCADQVDIMFTA--SAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-Q-KPLIIS------------TG 114 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~s--tpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-g-kPvilS------------tG 114 (335)
+..+.+.+++..+++.. -.-+.+.++.+.+.|++-+-|+|.-+.|..|++++++. | .-+++| +.
T Consensus 64 ~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~ 143 (243)
T 4gj1_A 64 FALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVN 143 (243)
T ss_dssp HHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--
T ss_pred HHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEec
Confidence 45667778888876654 35688999999999999999999999999999887763 3 223322 11
Q ss_pred CC-----CCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC
Q psy17999 115 ML-----PSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP 188 (335)
Q Consensus 115 ~~-----~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp 188 (335)
.+ .++.|+ ++.+.. |. .=+|+++++.=-+- .-.|+..+..+++.+|
T Consensus 144 gw~~~~~~~~~~~---~~~~~~~g~------------------------~eil~t~Id~DGt~-~G~d~~l~~~l~~~~~ 195 (243)
T 4gj1_A 144 AWQEASDKKLMEV---LDFYSNKGL------------------------KHILCTDISKDGTM-QGVNVRLYKLIHEIFP 195 (243)
T ss_dssp ------CCBHHHH---HHHHHTTTC------------------------CEEEEEETTC------CCCHHHHHHHHHHCT
T ss_pred CceecccchHHHH---HHHHhhcCC------------------------cEEEeeeecccccc-cCCCHHHHHHHHHhcC
Confidence 11 122222 233333 32 23455555422222 3478888999999888
Q ss_pred CCCeecCCCCCC
Q psy17999 189 DIPIGYSGHENG 200 (335)
Q Consensus 189 ~~pVG~SdHt~g 200 (335)
++||.+|+--..
T Consensus 196 ~ipviasGGv~~ 207 (243)
T 4gj1_A 196 NICIQASGGVAS 207 (243)
T ss_dssp TSEEEEESCCCS
T ss_pred CCCEEEEcCCCC
Confidence 899988875443
No 213
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=84.84 E-value=11 Score=32.90 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHcCCceEeccC--Chh----hHHHHHhCCCCEEEEcCCCC----CCHHHHHHHHhcCCcEEEeCCCCC-
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM--DQV----SFDFLLSANVPFIKIGSGDS----NNIPLIKYAASKQKPLIISTGMLP- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf--d~~----svd~l~~l~v~~~KIaS~d~----~n~~LL~~~a~~gkPvilStG~~~- 117 (335)
+-+..+.+.+++.|..++.... |.+ .++.+.+.++|.+-+.+.+. .+.++++.+.+.+.||++--....
T Consensus 32 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~ 111 (298)
T 3tb6_A 32 SIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAE 111 (298)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCTT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCcCC
Confidence 4577788899999987776543 332 24555667899999887764 567899999999999886532110
Q ss_pred ---------CHHHHHHHHHHHHh-cCC
Q psy17999 118 ---------SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 ---------tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |+.
T Consensus 112 ~~~~~V~~d~~~~~~~a~~~L~~~G~~ 138 (298)
T 3tb6_A 112 LAAPSFTLDDVKGGMMAAEHLLSLGHT 138 (298)
T ss_dssp CSSCEEEECHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEeCcHHHHHHHHHHHHHCCCC
Confidence 23345567777776 554
No 214
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=84.75 E-value=1.8 Score=40.80 Aligned_cols=57 Identities=9% Similarity=0.200 Sum_probs=51.1
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++.
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (362)
T 3fhl_A 59 ELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKK 115 (362)
T ss_dssp HHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHc
Confidence 455555799999999999999999999999999999999998999999999887763
No 215
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=84.72 E-value=7.4 Score=38.68 Aligned_cols=80 Identities=13% Similarity=0.217 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHH-cCCceEeccCChhhHHHHHhCCCC---EEEEcCCCCCCHH-HHHHHHhcCCcEEEeCCCCCCHH
Q psy17999 46 FSQEEYVMLQQCADQ-VDIMFTASAMDQVSFDFLLSANVP---FIKIGSGDSNNIP-LIKYAASKQKPLIISTGMLPSIE 120 (335)
Q Consensus 46 l~~e~~~~L~~~~~~-~Gi~f~stpfd~~svd~l~~l~v~---~~KIaS~d~~n~~-LL~~~a~~gkPvilStG~~~tl~ 120 (335)
-..+.+.++.+..++ .++++... +|++.++...+.+.+ ++==.+.+ |++ ++..+++.+.||++... +++
T Consensus 138 ~dpe~~~~~Vk~V~e~~dvPlsID-~dp~vleaale~~~d~~pLIns~t~e--n~~~~~~la~~y~~~vV~~~~---~l~ 211 (445)
T 2h9a_A 138 QDAATFAKAVATAREVTDLPFILI-GTPEQLAAALETEGANNPLLYAATAD--NYEQMVELAKKYNVPLTVSAK---GLD 211 (445)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEE-SCHHHHHHHHHHHGGGCCEEEEECTT--THHHHHHHHHHHTCCEEEECS---SHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHHHhcCCCCCEEEECCHH--HHHHHHHHHHHhCCeEEEEcC---CHH
Confidence 456778887777765 48888888 999998888876555 66555555 554 44556667999999653 777
Q ss_pred HHHHHHHHHHh
Q psy17999 121 HVDNIYTTVKQ 131 (335)
Q Consensus 121 Ei~~Av~~i~~ 131 (335)
...+.++.+.+
T Consensus 212 ~l~~lv~~a~~ 222 (445)
T 2h9a_A 212 ALAELVQKITA 222 (445)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777766
No 216
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=84.66 E-value=3.2 Score=40.36 Aligned_cols=78 Identities=9% Similarity=0.028 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcCC-------CCCCHHHHHHHHhc---CCcEEEeCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGSG-------DSNNIPLIKYAASK---QKPLIISTG 114 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS~-------d~~n~~LL~~~a~~---gkPvilStG 114 (335)
++++.. ....+..+++++. .+.+.+.+..+.+.|+|+|.|... ....+.+|.++.+. +.|||.+-|
T Consensus 239 ~~~~~i---~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GG 315 (392)
T 2nzl_A 239 ISWEDI---KWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGG 315 (392)
T ss_dssp CCHHHH---HHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSS
T ss_pred HHHHHH---HHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECC
Confidence 555554 4444556777776 568899999999999999999422 34456777777653 589999999
Q ss_pred CCCCHHHHHHHHH
Q psy17999 115 MLPSIEHVDNIYT 127 (335)
Q Consensus 115 ~~~tl~Ei~~Av~ 127 (335)
.. +-+++.+|+.
T Consensus 316 I~-~g~Dv~kala 327 (392)
T 2nzl_A 316 VR-KGTDVLKALA 327 (392)
T ss_dssp CC-SHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 99 9999998876
No 217
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=84.63 E-value=15 Score=34.24 Aligned_cols=154 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred HhhcCCHHHHHHHHHHHHHc---CCceEeccCC------hhhHHHHHhCCCCEEEEcCCCCCC------HHHHHHHHh-c
Q psy17999 42 QHLEFSQEEYVMLQQCADQV---DIMFTASAMD------QVSFDFLLSANVPFIKIGSGDSNN------IPLIKYAAS-K 105 (335)
Q Consensus 42 ~~~el~~e~~~~L~~~~~~~---Gi~f~stpfd------~~svd~l~~l~v~~~KIaS~d~~n------~~LL~~~a~-~ 105 (335)
+...|+.++..++.+.+.+. .+++++-+-+ .+.+..++++|+|++-+...-.+- ....+++|+ +
T Consensus 58 E~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 58 ESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp TGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Q ss_pred CCcEEE-----eCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchH
Q psy17999 106 QKPLII-----STGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNV 179 (335)
Q Consensus 106 gkPvil-----StG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~ 179 (335)
++||+| -||..++.+.+.+.++-+.+ -.- +...-|+..
T Consensus 138 ~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi------------------------------------Kdssgd~~~ 181 (306)
T 1o5k_A 138 DLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGI------------------------------------XEANPDIDQ 181 (306)
T ss_dssp SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE------------------------------------EECCCCHHH
T ss_pred CCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE------------------------------------eCCCCCHHH
Q ss_pred HHHHHHHCC----CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 180 IHTLRSRYP----DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 180 i~~L~~~fp----~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
+..+++..| +..| ||+.. .....+.++||+ +|= -.+.+-|+.+.+|.+.+++
T Consensus 182 ~~~~~~~~~~~~~~f~v-~~G~d---~~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~~ 238 (306)
T 1o5k_A 182 IDRTVSLTKQARSDFMV-WSGND---DRTFYLLCAGGDGVIS-------------VVSNVAPKQMVELCAEYFS 238 (306)
T ss_dssp HHHHHHHHHHHCTTCEE-EESSG---GGHHHHHHHTCCEEEE-------------SGGGTCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCcEEE-EECcH---HHHHHHHHCCCCEEEe-------------cHHHhhHHHHHHHHHHHHC
No 218
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=84.62 E-value=2.3 Score=39.48 Aligned_cols=57 Identities=14% Similarity=0.199 Sum_probs=50.5
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++.+-.+.++..++.+.||+|++...++.+++|.++.++..++.
T Consensus 60 ~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~ 116 (336)
T 2p2s_A 60 QLITDASIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAET 116 (336)
T ss_dssp HHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 445556799999999999999999999999999999999888999999998887763
No 219
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=84.57 E-value=4.5 Score=38.19 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHcCCceEec---c-CChhhHHHHHhCCCCEEEEcC-----------------------CCCCCHHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTAS---A-MDQVSFDFLLSANVPFIKIGS-----------------------GDSNNIPLIKYA 102 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~st---p-fd~~svd~l~~l~v~~~KIaS-----------------------~d~~n~~LL~~~ 102 (335)
++..+.+..+..+++++.- + ++.+.+..+.+.|+|++-+.. +-+..+..|.++
T Consensus 166 ~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v 245 (349)
T 1p0k_A 166 ALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEI 245 (349)
T ss_dssp HHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHH
Confidence 4455666666778887763 2 788899999999999998841 123445667777
Q ss_pred Hhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 103 ASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 103 a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.+. +.|||.+-|.. +.+++.+++.
T Consensus 246 ~~~~~~ipvia~GGI~-~~~d~~k~l~ 271 (349)
T 1p0k_A 246 RSEFPASTMIASGGLQ-DALDVAKAIA 271 (349)
T ss_dssp HHHCTTSEEEEESSCC-SHHHHHHHHH
T ss_pred HHhcCCCeEEEECCCC-CHHHHHHHHH
Confidence 663 79999999999 9999998765
No 220
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=84.54 E-value=1 Score=43.19 Aligned_cols=119 Identities=8% Similarity=0.141 Sum_probs=66.5
Q ss_pred CCCCcEEEeec---ccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHH-H--cCCceEeccC----
Q psy17999 1 ECGADCVKFQK---SCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCAD-Q--VDIMFTASAM---- 70 (335)
Q Consensus 1 ~aGaDaVKFQ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~-~--~Gi~f~stpf---- 70 (335)
+||.|+|...- |-.+.+++...- .....|+.+. .++..|..|-.+.+++.+- + .|+.+...-|
T Consensus 169 ~aGfDgVEih~a~GyLl~qFlsp~~N----~R~D~yGGsl---enR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 169 DAGFEWIELHFAHGYLGQSFFSEHSN----KRTDAYGGSF---DNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHTCSEEEEEECTTSHHHHHHCTTTC----CCCSTTSSSH---HHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HcCCCEEEEccccchHHHHccCCCcC----CCCcccCcCH---HHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 37999999875 222222222110 0012345443 2334455555555555442 1 2333332212
Q ss_pred --Chhh----HHHHHhCCCCEEEEcCC-----------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 71 --DQVS----FDFLLSANVPFIKIGSG-----------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 71 --d~~s----vd~l~~l~v~~~KIaS~-----------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+. +..|++.|+|++-|..+ .-.++++++.+.+ .+.|||..-|.. |.++.+++++
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~-s~e~a~~~l~ 315 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFG-TPQLAEAALQ 315 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTT-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCC-CHHHHHHHHH
Confidence 2222 55677889999988753 2247888888776 589999888888 8877776543
No 221
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=84.53 E-value=3.1 Score=38.40 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=57.2
Q ss_pred HHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 54 LQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 54 L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
..+.++++|+.-. ++ +. +++ +-++|++-|++..-.+.+++.++.+.||+|++...++.+.+|.++.++..++
T Consensus 39 ~~~~~~~~~~~~~---~~--~~~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~ 111 (325)
T 2ho3_A 39 AATFASRYQNIQL---FD--QLEVFF-KSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEK 111 (325)
T ss_dssp HHHHGGGSSSCEE---ES--CHHHHH-TSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeE---eC--CHHHHh-CCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHH
Confidence 4466777886221 21 23 344 5579999999999999999999999999999999888899999998887776
No 222
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=84.29 E-value=13 Score=35.13 Aligned_cols=149 Identities=11% Similarity=0.153 Sum_probs=83.7
Q ss_pred cCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC--CHHHHHHHHhcC-CcEEEeCCCCCCHHH
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN--NIPLIKYAASKQ-KPLIISTGMLPSIEH 121 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~--n~~LL~~~a~~g-kPvilStG~~~tl~E 121 (335)
.|+.++-.++.+...+.|+. .|-+++.-.+ .+..++++++.. .+.+..-+.+ ..++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~--------------------~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r~-~~~~ 82 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVD--------------------VIEAGFPVSSPGDFNSVVEITKAVTRPTICALTRA-KEAD 82 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCS--------------------EEEEECTTSCHHHHHHHHHHHHHCCSSEEEEECCS-CHHH
T ss_pred CCCHHHHHHHHHHHHHcCCC--------------------EEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEeecC-CHHH
Confidence 46667766666655555544 4444443222 345667776643 3344444445 8899
Q ss_pred HHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCC------CCCCc-cCCC-c-hHHHHHHHHCCCCC
Q psy17999 122 VDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA------YPTPY-HDIN-L-NVIHTLRSRYPDIP 191 (335)
Q Consensus 122 i~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~------YP~~~-~~~n-L-~~i~~L~~~fp~~p 191 (335)
++.|++.+.. |.. .+.+.-.+|. .-... +.++ + ..+...++ . +..
T Consensus 83 i~~a~~al~~ag~~-----------------------~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~-~-g~~ 137 (325)
T 3eeg_A 83 INIAGEALRFAKRS-----------------------RIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKK-V-VHE 137 (325)
T ss_dssp HHHHHHHHTTCSSE-----------------------EEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHT-T-SSE
T ss_pred HHHHHHhhcccCCC-----------------------EEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH-C-CCE
Confidence 9999988765 332 3333323332 12112 2222 1 23444444 4 566
Q ss_pred eecC-----CCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 192 IGYS-----GHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 192 VG~S-----dHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
|-|+ .++.. ..++.++..+||+.|= + +|-.-.++|.++.++++.+++.
T Consensus 138 v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~----l------~DT~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 138 VEFFCEDAGRADQAFLARMVEAVIEAGADVVN----I------PDTTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHHTCSEEE----C------CBSSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEccccccchHHHHHHHHHHHHhcCCCEEE----e------cCccCCcCHHHHHHHHHHHHHh
Confidence 6553 12222 4456778889998654 3 2666779999999999998764
No 223
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=84.22 E-value=6.6 Score=30.27 Aligned_cols=79 Identities=9% Similarity=0.026 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHH
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~ 123 (335)
=.......|.+..++.|..+....-..+.++.+.+..+|++- -.+++-+.+++.+.+. ..|||+-|+.. +.+.+.
T Consensus 26 d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~ 102 (137)
T 2pln_A 26 KNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVSSDNP-TSEEEV 102 (137)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTTSEEEEEESSC-CHHHHH
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCCccEEEEeCCC-CHHHHH
Confidence 355667778888888898877444445566777777777766 4567778999998875 78999999988 777666
Q ss_pred HHHH
Q psy17999 124 NIYT 127 (335)
Q Consensus 124 ~Av~ 127 (335)
.+++
T Consensus 103 ~~~~ 106 (137)
T 2pln_A 103 HAFE 106 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 224
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=84.17 E-value=10 Score=33.18 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeCCCC----
Q psy17999 48 QEEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIISTGML---- 116 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilStG~~---- 116 (335)
.+-+..+.+++++.|..++... .|.+ .++.+.+.++|.+-+.+.+.. .+.++.+.+ .+.|+++--...
T Consensus 37 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~~~~~~ 115 (296)
T 3brq_A 37 SELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRRLRKNS 115 (296)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCCCSSSG
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccccCCCC
Confidence 3556778889999998876543 3332 245555668999988776654 478888888 899987642211
Q ss_pred -----CC-HHHHHHHHHHHHh-cCC
Q psy17999 117 -----PS-IEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 -----~t-l~Ei~~Av~~i~~-g~~ 134 (335)
.+ .+-...|++++.+ |..
T Consensus 116 ~~~V~~d~~~~~~~a~~~l~~~G~~ 140 (296)
T 3brq_A 116 SHSVWCDHKQTSFNAVAELINAGHQ 140 (296)
T ss_dssp GGEECCCHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEchHHHHHHHHHHHHHCCCc
Confidence 01 2234567777766 544
No 225
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=84.06 E-value=2.8 Score=38.76 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=57.5
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
.+.+.++++|+... ..|. .+.+ .-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 39 ~~~~~a~~~g~~~~--~~~~--~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~ 113 (323)
T 1xea_A 39 VLGTLATRYRVSAT--CTDY--RDVL-QYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKH 113 (323)
T ss_dssp HHHHHHHHTTCCCC--CSST--TGGG-GGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcc--ccCH--HHHh-hcCCCEEEEECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhc
Confidence 34456778887631 1221 2234 44699999999999999999999999999999988887999999888877763
No 226
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=84.03 E-value=3.5 Score=37.98 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=57.7
Q ss_pred HHHHHHHcCCceEeccCChhhHH-HHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 54 LQQCADQVDIMFTASAMDQVSFD-FLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 54 L~~~~~~~Gi~f~stpfd~~svd-~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
..+.++++|+.- .++ +.+ ++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+.+|.++.++..++.
T Consensus 38 ~~~~~~~~g~~~---~~~--~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~ 112 (332)
T 2glx_A 38 GAAYATENGIGK---SVT--SVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREA 112 (332)
T ss_dssp HHHHHHHTTCSC---CBS--CHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc---ccC--CHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 345667788741 122 333 44445799999999999999999999999999999988877999999988887763
No 227
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=84.02 E-value=12 Score=28.43 Aligned_cols=80 Identities=10% Similarity=0.120 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei 122 (335)
.......|.+..++.|..+.+..-..+.++.+.+..+|++-+.. .+.+-+.+++++.+. ..|||+-|+.. +.+.+
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~-~~~~~ 94 (130)
T 3eod_A 16 EQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE-NMADI 94 (130)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC-CHHHH
T ss_pred CHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC-CHHHH
Confidence 34455667777888898887655555667777777788877764 467789999998875 57999999988 88777
Q ss_pred HHHHH
Q psy17999 123 DNIYT 127 (335)
Q Consensus 123 ~~Av~ 127 (335)
..+.+
T Consensus 95 ~~~~~ 99 (130)
T 3eod_A 95 AKALR 99 (130)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 228
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=84.00 E-value=11 Score=33.31 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCceEeccC--Ch----hhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM--DQ----VSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf--d~----~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.|++.|..++.... |. +.++.+.+.++|.+-+.+.+... +.++.+.+.+.|+++--....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~ 103 (287)
T 3bbl_A 25 QFLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND-PRVQFLLKQKFPFVAFGRSNPDWDFA 103 (287)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC-HHHHHHHHTTCCEEEESCCSTTCCCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc-HHHHHHHhcCCCEEEECCcCCCCCCC
Confidence 4567778889999988765442 22 23566667789999998877665 788888888999876422110
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 104 ~V~~D~~~~g~~a~~~L~~~G~~ 126 (287)
T 3bbl_A 104 WVDIDGTAGTRQAVEYLIGRGHR 126 (287)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCC
T ss_pred EEEeccHHHHHHHHHHHHHCCCC
Confidence 12345667777776 544
No 229
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=83.95 E-value=6.9 Score=34.04 Aligned_cols=85 Identities=6% Similarity=-0.020 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML------ 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~------ 116 (335)
+-+..+.+.+++.|..++... .+.+ .++.+.+.++|.+-+.+.+.. -+.++.+.+.+.|+++--...
T Consensus 20 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~ 98 (275)
T 3d8u_A 20 HFLPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAELSSKASYL 98 (275)
T ss_dssp HHHHHHHHHHHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSSCSSSSSE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeeccCCCCCC
Confidence 346677888999998765433 3332 245566678999888776654 578888888899987642211
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |..
T Consensus 99 ~V~~d~~~~~~~a~~~L~~~G~~ 121 (275)
T 3d8u_A 99 NIGVDHFEVGKACTRHLIEQGFK 121 (275)
T ss_dssp EECBCHHHHHHHHHHHHHTTTCC
T ss_pred EEEEChHHHHHHHHHHHHHCCCC
Confidence 0 12345667777776 544
No 230
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=83.94 E-value=2.2 Score=37.09 Aligned_cols=74 Identities=8% Similarity=0.123 Sum_probs=49.1
Q ss_pred cCCHHHHHHHHHHHHHcCCceEe--ccCChh-hHHHHHhCCCCEEEEcCCCCCCH-HHHHHHHhcCCcEEEeCCCCCCHH
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTA--SAMDQV-SFDFLLSANVPFIKIGSGDSNNI-PLIKYAASKQKPLIISTGMLPSIE 120 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~s--tpfd~~-svd~l~~l~v~~~KIaS~d~~n~-~LL~~~a~~gkPvilStG~~~tl~ 120 (335)
.+..+..++|++.+ ++.+.. -+.|.. .++.+.+.|++.+.++.....+. .+++++.+.|++++++...+ |..
T Consensus 47 ~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~-t~~ 122 (220)
T 2fli_A 47 SFGADVVASMRKHS---KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPG-TPA 122 (220)
T ss_dssp CBCHHHHHHHHTTC---CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTT-SCG
T ss_pred ccCHHHHHHHHHhC---CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCC-CCH
Confidence 34466666666554 443333 334543 57889999999999987766554 45566767788899998655 544
Q ss_pred HH
Q psy17999 121 HV 122 (335)
Q Consensus 121 Ei 122 (335)
|.
T Consensus 123 e~ 124 (220)
T 2fli_A 123 TA 124 (220)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 231
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=83.93 E-value=2 Score=39.96 Aligned_cols=53 Identities=13% Similarity=0.152 Sum_probs=49.2
Q ss_pred hCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 80 SANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 80 ~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+-++|++-|++..-.+.++.+++.+.||+|++...++.|++|.++.++..++.
T Consensus 70 ~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 122 (312)
T 3o9z_A 70 GEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEART 122 (312)
T ss_dssp TCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHc
Confidence 45799999999999999999999999999999999999999999999987763
No 232
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=83.87 E-value=2.2 Score=40.45 Aligned_cols=57 Identities=12% Similarity=0.263 Sum_probs=50.6
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 117 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEK 117 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 344556799999999999999999999999999999999988999999998887763
No 233
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=83.62 E-value=1.1 Score=42.77 Aligned_cols=138 Identities=14% Similarity=0.188 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHHcCCceEec--c--CChhhHHHH---HhCCCCEEEEcCCCCCCHHHHHH----HHhcCCcEEEeC--
Q psy17999 47 SQEEYVMLQQCADQVDIMFTAS--A--MDQVSFDFL---LSANVPFIKIGSGDSNNIPLIKY----AASKQKPLIIST-- 113 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~st--p--fd~~svd~l---~~l~v~~~KIaS~d~~n~~LL~~----~a~~gkPvilSt-- 113 (335)
+++.++.|.+ . .+..+..- . ..++.++.+ ...|++.+-|.. ++.|++-... +.+.|..|..+-
T Consensus 61 ~~e~l~~i~~-~--~~~~~~~L~r~~~~~~~dv~~~~~a~~~Gvd~~ri~~-~~~nle~~~~~v~~ak~~G~~v~~~~~~ 136 (320)
T 3dxi_A 61 PVSVLKHLRN-I--STKKIAIMLNEKNTTPEDLNHLLLPIIGLVDMIRIAI-DPQNIDRAIVLAKAIKTMGFEVGFNVMY 136 (320)
T ss_dssp CHHHHHHHHH-H--CCSEEEEEEEGGGCCGGGHHHHHGGGTTTCSEEEEEE-CGGGHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred hHHHHHHHhh-c--cCCeEEEEecCCCCChhhHHHHHHhhhcCCCEEEEEe-cHHHHHHHHHHHHHHHHCCCEEEEEEEe
Confidence 6666666665 2 44444332 1 112234333 346788888875 6666544433 344577776552
Q ss_pred --CCCCCHH-HHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCC
Q psy17999 114 --GMLPSIE-HVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDI 190 (335)
Q Consensus 114 --G~~~tl~-Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~ 190 (335)
+.. +.+ .+..+.+ +..|.. .|-+|+ +..+-+|..-.+ .+..|++.+ ++
T Consensus 137 ~~~~~-~~~~~l~~~~~-~~~G~~--~i~l~D----------------------t~G~~~P~~~~~--lv~~l~~~~-~~ 187 (320)
T 3dxi_A 137 MSKWA-EMNGFLSKLKA-IDKIAD--LFCMVD----------------------SFGGITPKEVKN--LLKEVRKYT-HV 187 (320)
T ss_dssp TTTGG-GSTTSGGGGGG-GTTTCS--EEEEEC----------------------TTSCCCHHHHHH--HHHHHHHHC-CS
T ss_pred CCCCC-CHHHHHHHHHH-hhCCCC--EEEECc----------------------ccCCCCHHHHHH--HHHHHHHhC-CC
Confidence 222 221 1222222 222322 222222 334444443333 477889999 69
Q ss_pred CeecCCCCC-C--hHHHHHHHHcCCcEEEe
Q psy17999 191 PIGYSGHEN-G--VHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 191 pVG~SdHt~-g--~~~~~aAvalGA~vIEk 217 (335)
||++=.|.. | ...+++|+..||++|+-
T Consensus 188 ~i~~H~Hn~~G~a~an~laA~~aGa~~vd~ 217 (320)
T 3dxi_A 188 PVGFHGHDNLQLGLINSITAIDDGIDFIDA 217 (320)
T ss_dssp CEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred eEEEEeCCCCccHHHHHHHHHHhCCCEEEE
Confidence 999987764 4 55678999999999984
No 234
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=83.61 E-value=8.3 Score=33.64 Aligned_cols=83 Identities=10% Similarity=-0.064 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHcCCceEeccCC--hh----hHHHHHhCCCCEEEEcCCCCCCHHHHH-HHHhcCCcEEEeCC-C----C
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD--QV----SFDFLLSANVPFIKIGSGDSNNIPLIK-YAASKQKPLIISTG-M----L 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd--~~----svd~l~~l~v~~~KIaS~d~~n~~LL~-~~a~~gkPvilStG-~----~ 116 (335)
+-+..+.+.+++.|..++....+ .+ .++.+.+.++|.+-+.+ .+.+.++ .+.+.|.|+++--. . .
T Consensus 25 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~---~~~~~~~~~l~~~~iPvV~~~~~~~~~~~ 101 (277)
T 3e61_A 25 LIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA---FNENIIENTLTDHHIPFVFIDRINNEHNG 101 (277)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG---GGHHHHHHHHHHC-CCEEEGGGCC-----
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec---CChHHHHHHHHcCCCCEEEEeccCCCCCe
Confidence 44667788999999887765443 22 24555667899999877 4577888 89999999886322 1 1
Q ss_pred C---CHHHHHHHHHHHHh-cCC
Q psy17999 117 P---SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ~---tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |..
T Consensus 102 V~~D~~~~g~~a~~~L~~~G~~ 123 (277)
T 3e61_A 102 ISTNHFKGGQLQAEVVRKGKGK 123 (277)
T ss_dssp ----HHHHHHHHHHHHHHTTCC
T ss_pred EEechHHHHHHHHHHHHHCCCC
Confidence 1 22334556666665 544
No 235
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=83.58 E-value=4.8 Score=37.88 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCceEec--cCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHh--cCCcEEEeCCCCCCHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTAS--AMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAAS--KQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~st--pfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~--~gkPvilStG~~~tl~Ei~~Av 126 (335)
...|.+..+...|+++.- ......++.++..|+|++ -.|..++...+++++.+ .+.|+++. .. +++|...++
T Consensus 67 ~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I-d~s~~~~~~~li~~i~~~~~g~~vvv~--v~-~~~Ea~~a~ 142 (297)
T 4adt_A 67 PLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML-DESEVLTMADEYNHINKHKFKTPFVCG--CT-NLGEALRRI 142 (297)
T ss_dssp HHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE-EEETTSCCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE-EcCCCCCHHHHHHHHHhcCCCCeEEEE--eC-CHHHHHHHH
Confidence 334445566678999864 344777888889999999 55555677788888887 57899884 56 999988775
Q ss_pred H
Q psy17999 127 T 127 (335)
Q Consensus 127 ~ 127 (335)
+
T Consensus 143 ~ 143 (297)
T 4adt_A 143 S 143 (297)
T ss_dssp H
T ss_pred h
Confidence 4
No 236
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.58 E-value=2.1 Score=37.55 Aligned_cols=149 Identities=10% Similarity=0.053 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
..+.+.|+++|+.++.. +.++.+.++|++++.++..++.... .+.+++..+.. |.+|+..|. .
T Consensus 44 ~~i~~l~~~~~~~livn----d~~~~A~~~gadgvhl~~~~~~~~~--------~~~~~ig~s~~-t~~e~~~A~----~ 106 (210)
T 3ceu_A 44 RLLTLIPEKYHRRIVTH----EHFYLKEEFNLMGIHLNARNPSEPH--------DYAGHVSCSCH-SVEEVKNRK----H 106 (210)
T ss_dssp HHHHHSCGGGGGGEEES----SCTTHHHHTTCSEEECCSSSCSCCT--------TCCSEEEEEEC-SHHHHHTTG----G
T ss_pred HHHHHHHHHhCCeEEEe----CCHHHHHHcCCCEEEECcccccccc--------ccCCEEEEecC-CHHHHHHHh----h
Confidence 34566788889988874 5668888999999999888773210 12445555556 899987763 2
Q ss_pred cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc-----cCCCchHHHHHHHHC-CCCCeecC-CCCCChHHH
Q psy17999 132 YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY-----HDINLNVIHTLRSRY-PDIPIGYS-GHENGVHVC 204 (335)
Q Consensus 132 g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~-----~~~nL~~i~~L~~~f-p~~pVG~S-dHt~g~~~~ 204 (335)
|. +++.+-- -||++. ...++..+..+++.+ +++||--. +=+.. -.
T Consensus 107 Ga------------------------Dyv~~g~--vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~--nv 158 (210)
T 3ceu_A 107 FY------------------------DYVFMSP--IYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINED--NL 158 (210)
T ss_dssp GS------------------------SEEEECC--CC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTT--TH
T ss_pred CC------------------------CEEEECC--cCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHH--HH
Confidence 32 3444322 255543 246788888888763 47887322 22222 22
Q ss_pred HHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q psy17999 205 YAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSL 253 (335)
Q Consensus 205 ~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~al 253 (335)
..++..||.-+= .-+. ...|.... .+|.+.++..+++.+..
T Consensus 159 ~~~~~~Ga~gVav~s~i~-----~~~d~~~~---~~~~~~v~~~~~~~~~~ 201 (210)
T 3ceu_A 159 LEIKDFGFGGAVVLGDLW-----NKFDACLD---QNYLAVIEHFKKLKKLA 201 (210)
T ss_dssp HHHHHTTCSEEEESHHHH-----TTCCTTTS---SCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEhHHhH-----cCCCHHHH---HHHHHHHHHHHHHHHhh
Confidence 335568887221 0111 01132222 56667777766666553
No 237
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=83.52 E-value=27 Score=32.13 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=93.9
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCCC----CCHHHHH---HHHh-c-
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGDS----NNIPLIK---YAAS-K- 105 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d~----~n~~LL~---~~a~-~- 105 (335)
..|+.++..++.+.+.+. .+++++-+-. .++++ .++++|+|.+-+...-. +.-.+++ ++|+ +
T Consensus 51 ~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p 130 (294)
T 3b4u_A 51 CSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIG 130 (294)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 459999999999988764 3667655543 34444 45578999988866543 3344554 4555 5
Q ss_pred --CCcEEE-----eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCc-eEEeeecCCCCCCccCCCc
Q psy17999 106 --QKPLII-----STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSN-LSILHCVSAYPTPYHDINL 177 (335)
Q Consensus 106 --gkPvil-----StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~-l~llHC~s~YP~~~~~~nL 177 (335)
++||+| -||..++.+.+.+.++ + .+ + ++-+-= ..-|+
T Consensus 131 ~~~lPiilYn~P~~tg~~l~~~~~~~La~---~-~p-----------------------n~ivgiKd--------s~gd~ 175 (294)
T 3b4u_A 131 KDARDILVYNIPSVTMVTLSVELVGRLKA---A-FP-----------------------GIVTGVKD--------SSGNW 175 (294)
T ss_dssp TTCCCEEEEECHHHHSCCCCHHHHHHHHH---H-CT-----------------------TTEEEEEE--------CCCCH
T ss_pred CCCCcEEEEECcchhCcCCCHHHHHHHHH---h-CC-----------------------CcEEEEEE--------CCCCH
Confidence 899999 4788778888877652 1 12 2 332221 12467
Q ss_pred hHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy17999 178 NVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVT 244 (335)
Q Consensus 178 ~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~ 244 (335)
..+..+++..|+..| ||+. ......+.++||+ +|= -.+.+-|+.+.+|.+
T Consensus 176 ~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~is-------------~~~n~~P~~~~~l~~ 226 (294)
T 3b4u_A 176 SHTERLLKEHGDLAI-LIGD---ERDLARGVRLGGQGAIS-------------GVANFLTQEVRAMAV 226 (294)
T ss_dssp HHHHHHHHHHTTSEE-EECC---HHHHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHT
T ss_pred HHHHHHHHhCCCeEE-EEcc---HHHHHHHHHCCCCEEEe-------------CHHHhCHHHHHHHHH
Confidence 778888776643333 6654 2344567889987 543 223456788888775
No 238
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=83.28 E-value=8.9 Score=30.49 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIE 120 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~ 120 (335)
.......|.+..++.|..+.+..-..+.++.+.+..+|++-+.. .+.+-+.+++.+.+. ..|||+-|+.. +.+
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~ 94 (154)
T 3gt7_A 16 SPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS-DPR 94 (154)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC-SHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC-ChH
Confidence 34455667777888898876655555667777777788877754 467778999998764 67999999988 887
Q ss_pred HHHHHHH
Q psy17999 121 HVDNIYT 127 (335)
Q Consensus 121 Ei~~Av~ 127 (335)
.+..+++
T Consensus 95 ~~~~~~~ 101 (154)
T 3gt7_A 95 DVVRSLE 101 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 239
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=83.22 E-value=2.1 Score=40.07 Aligned_cols=57 Identities=7% Similarity=0.030 Sum_probs=50.8
Q ss_pred HHHHh-CCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLS-ANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~-l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
++|.+ -++|++-|++..-.+.++..++.+.||+|++...++.+++|.++.++..++.
T Consensus 74 ~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~ 131 (330)
T 4ew6_A 74 AMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQ 131 (330)
T ss_dssp HHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 44555 5799999999999999999999999999999999888999999999887763
No 240
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=83.16 E-value=3.3 Score=39.15 Aligned_cols=134 Identities=13% Similarity=0.150 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHcCCceEec-cCChhh---HHHHHhCC--CCEEEEcCC---CCCCHHHHHHHHhc-CCcEEEeCCCCCCH
Q psy17999 50 EYVMLQQCADQVDIMFTAS-AMDQVS---FDFLLSAN--VPFIKIGSG---DSNNIPLIKYAASK-QKPLIISTGMLPSI 119 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~st-pfd~~s---vd~l~~l~--v~~~KIaS~---d~~n~~LL~~~a~~-gkPvilStG~~~tl 119 (335)
....+.+.+++.|+.+... ..+++. +..+.+.+ ++++-|... ...++..++++.+. +.|+++.-+.. +.
T Consensus 82 ~~~~~i~~~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~-s~ 160 (336)
T 1ypf_A 82 KRISFIRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVG-TP 160 (336)
T ss_dssp GHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEEC-SH
T ss_pred HHHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcC-CH
Confidence 3455566667778655443 233444 44556777 888877432 12346677877665 34555542245 77
Q ss_pred HHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEe--ee----cCCCCCCcc--CCCchHHHHHHHHCCCCC
Q psy17999 120 EHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSIL--HC----VSAYPTPYH--DINLNVIHTLRSRYPDIP 191 (335)
Q Consensus 120 ~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ll--HC----~s~YP~~~~--~~nL~~i~~L~~~fp~~p 191 (335)
++.+.+++. |-. .+++ |. .+.+..... ...+..+..+++.. ++|
T Consensus 161 e~A~~a~~a---Gad------------------------~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~-~ip 212 (336)
T 1ypf_A 161 EAVRELENA---GAD------------------------ATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA-SKP 212 (336)
T ss_dssp HHHHHHHHH---TCS------------------------EEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-SSC
T ss_pred HHHHHHHHc---CCC------------------------EEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc-CCc
Confidence 766665542 432 2222 21 100000000 12577888888877 899
Q ss_pred eecC-CCCCChHHHHHHHHcCCc
Q psy17999 192 IGYS-GHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 192 VG~S-dHt~g~~~~~aAvalGA~ 213 (335)
|.-+ +=..|..+ ..|.++||+
T Consensus 213 VIa~GGI~~g~Dv-~kalalGAd 234 (336)
T 1ypf_A 213 IIADGGIRTNGDV-AKSIRFGAT 234 (336)
T ss_dssp EEEESCCCSTHHH-HHHHHTTCS
T ss_pred EEEeCCCCCHHHH-HHHHHcCCC
Confidence 9554 43444444 457789998
No 241
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=83.10 E-value=10 Score=33.10 Aligned_cols=84 Identities=11% Similarity=0.008 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh------hhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC-CC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ------VSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG-ML----- 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~------~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG-~~----- 116 (335)
+-+..+.+.+++.|..++....+. +.++.+.+.++|.+-+.+.+. .+.++.+.+.+.|+++--. ..
T Consensus 24 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~~~~~~~~ 101 (276)
T 3jy6_A 24 ELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDREMDACPWP 101 (276)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCCCTTCSSC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEecccCCCCCC
Confidence 446678889999999877655442 235566667899999988877 8899999999999876422 11
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |..
T Consensus 102 ~V~~D~~~~g~~a~~~L~~~G~~ 124 (276)
T 3jy6_A 102 QVVTDNFEAAKAATTAFRQQGYQ 124 (276)
T ss_dssp EEECCHHHHHHHHHHHHHTTTCC
T ss_pred EEEEChHHHHHHHHHHHHHcCCC
Confidence 0 23445567777776 554
No 242
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=83.09 E-value=11 Score=28.73 Aligned_cols=78 Identities=12% Similarity=0.053 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~Ei 122 (335)
.....|....++.|..+....-..+.++.+.+..+|++-+.- .+++-+.+++++.+. +.|||+-|+.. +.+..
T Consensus 13 ~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~ 91 (122)
T 3gl9_A 13 VLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG-GEEDE 91 (122)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC-SHHHH
T ss_pred HHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC-chHHH
Confidence 344556677778898887655556667888877788877653 356778999998653 57999999988 77776
Q ss_pred HHHHH
Q psy17999 123 DNIYT 127 (335)
Q Consensus 123 ~~Av~ 127 (335)
..+.+
T Consensus 92 ~~~~~ 96 (122)
T 3gl9_A 92 SLALS 96 (122)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 243
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=82.90 E-value=3.7 Score=36.46 Aligned_cols=79 Identities=5% Similarity=0.043 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCC-------CC-----H-HHHHHHHhc--CCcEE
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDS-------NN-----I-PLIKYAASK--QKPLI 110 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~-------~n-----~-~LL~~~a~~--gkPvi 110 (335)
++.++..++.+.|+++|+..+..+.+....+.+.+++.+++=+.+.+. .. . ..++.+.+. +.||+
T Consensus 95 l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii 174 (219)
T 2h6r_A 95 MLLADIEAVINKCKNLGLETIVCTNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVL 174 (219)
T ss_dssp CBHHHHHHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEE
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEE
Confidence 777889999999999999999999998888888888888876666553 11 1 222223322 68999
Q ss_pred EeCCCCCCHHHHHHH
Q psy17999 111 ISTGMLPSIEHVDNI 125 (335)
Q Consensus 111 lStG~~~tl~Ei~~A 125 (335)
.--|.+ +.+++..+
T Consensus 175 ~ggGI~-~~~~~~~~ 188 (219)
T 2h6r_A 175 CGAGIS-KGEDVKAA 188 (219)
T ss_dssp ECSSCC-SHHHHHHH
T ss_pred EEeCcC-cHHHHHHH
Confidence 888888 87777754
No 244
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=82.88 E-value=2.6 Score=39.26 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=49.1
Q ss_pred hCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 80 SANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 80 ~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+-++|++-|++.+-.+.++..++.+.||+|++...++.|++|.++.++..++.
T Consensus 71 ~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 123 (318)
T 3oa2_A 71 ATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERET 123 (318)
T ss_dssp TTSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHh
Confidence 45699999999999999999999999999999999999999999999987763
No 245
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=82.84 E-value=12 Score=35.97 Aligned_cols=74 Identities=19% Similarity=0.157 Sum_probs=40.0
Q ss_pred hHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 178 NVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 178 ~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
..+...++..+++||.-++--....-...|+++||+.+- +.|-.- ...|++ --.+.+..+.++++.+-..+|.
T Consensus 256 ~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~-~~~G~~----~v~~~l~~l~~eL~~~m~~~G~ 330 (368)
T 3vkj_A 256 ASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS-AIEGKE----SLEQFFRKIIFELKAAMMLTGS 330 (368)
T ss_dssp HHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH-HHHCHH----HHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH-HhcChH----HHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777766888655433333444568889998544 111100 001210 0012566677777777777775
Q ss_pred C
Q psy17999 256 P 256 (335)
Q Consensus 256 ~ 256 (335)
.
T Consensus 331 ~ 331 (368)
T 3vkj_A 331 K 331 (368)
T ss_dssp C
T ss_pred C
Confidence 4
No 246
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=82.83 E-value=4.7 Score=35.69 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCCceEeccC--Chhh----HHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAM--DQVS----FDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpf--d~~s----vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~ 123 (335)
...+..++++.|+..+-+.| |..+ ++.+.+..+|++.+=++-+ ..+++++.+ ++.|||..=+.. |.+|+.
T Consensus 90 k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~--p~iI~~i~~~~~~PiIaGGlI~-~~edv~ 166 (192)
T 3kts_A 90 RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGII--PEQVQKMTQKLHIPVIAGGLIE-TSEQVN 166 (192)
T ss_dssp CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTC--HHHHHHHHHHHCCCEEEESSCC-SHHHHH
T ss_pred cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchh--HHHHHHHHHhcCCCEEEECCcC-CHHHHH
Confidence 45678899999999999998 4333 5667777899999998866 578888876 599999999999 999999
Q ss_pred HHHH
Q psy17999 124 NIYT 127 (335)
Q Consensus 124 ~Av~ 127 (335)
.|++
T Consensus 167 ~al~ 170 (192)
T 3kts_A 167 QVIA 170 (192)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9865
No 247
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=82.76 E-value=4.3 Score=39.23 Aligned_cols=54 Identities=15% Similarity=0.028 Sum_probs=37.3
Q ss_pred ceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEE
Q psy17999 158 NLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIE 216 (335)
Q Consensus 158 ~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIE 216 (335)
+++.+|+...|+.. -+..|..+|+.+|++||.-- -......+..++..||+.|-
T Consensus 114 dvI~id~a~G~~~~----~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 114 DFFCVDVAHAHAKY----VGKTLKSLRQLLGSRCIMAG-NVATYAGADYLASCGADIIK 167 (361)
T ss_dssp CEEEEECSCCSSHH----HHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHHHTTCSEEE
T ss_pred CEEEEeCCCCCcHh----HHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHHHcCCCEEE
Confidence 67778766555421 15678899999888888431 12236678889999999776
No 248
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=82.75 E-value=12 Score=34.45 Aligned_cols=84 Identities=6% Similarity=0.002 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC--------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG-------- 114 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG-------- 114 (335)
+-+..+.+.|++.|..++... +|.+ .++.+.+.++|.+-+.+.+. +.+.++.+.+.+.|+++--.
T Consensus 87 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~-~~~~~~~l~~~~iPvV~i~~~~~~~~~~ 165 (355)
T 3e3m_A 87 QTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGH-TEQTIRLLQRASIPIVEIWEKPAHPIGH 165 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCC-CHHHHHHHHHCCSCEEEESSCCSSCSSE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEECCccCCCCCC
Confidence 456778889999999877644 3433 24555667899998877665 45888999999999986411
Q ss_pred ---CCCCHHHHHHHHHHHHh-cCC
Q psy17999 115 ---MLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 115 ---~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
.- ..+-...|++++.+ |+.
T Consensus 166 ~V~~D-~~~~~~~a~~~L~~~G~r 188 (355)
T 3e3m_A 166 TVGFS-NERAAYDMTNALLARGFR 188 (355)
T ss_dssp EEECC-HHHHHHHHHHHHHHTTCC
T ss_pred EEEeC-hHHHHHHHHHHHHHCCCC
Confidence 11 23445667777776 554
No 249
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=82.69 E-value=3.3 Score=40.39 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=60.2
Q ss_pred HHHHHHHHcCCceEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcC------CcEEEeCCCCCCHHHHHHH
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQ------KPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~g------kPvilStG~~~tl~Ei~~A 125 (335)
...+.++++|+.- ...|+ +. +++.+-++|++-|++.+-.+.+++.++.+.| |+|++...++.+++|.++.
T Consensus 62 ~~~~~a~~~g~~~-~~~~~--~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l 138 (438)
T 3btv_A 62 TSIATIQRLKLSN-ATAFP--TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 138 (438)
T ss_dssp HHHHHHHHTTCTT-CEEES--SHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHH
T ss_pred HHHHHHHHcCCCc-ceeeC--CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHH
Confidence 4566778888751 01121 23 4555567999999999999999999999999 9999999988899999999
Q ss_pred HHHHHh
Q psy17999 126 YTTVKQ 131 (335)
Q Consensus 126 v~~i~~ 131 (335)
++..++
T Consensus 139 ~~~a~~ 144 (438)
T 3btv_A 139 YKAAAE 144 (438)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 988776
No 250
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=82.65 E-value=2.1 Score=41.75 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCceE-eccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 53 MLQQCADQVDIMFT-ASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~-stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
...+.++++|+.-. ...|+ +. +++.+-++|++-|++.+-.+.+++.++.+.||+|++...++.+++|.++.++..+
T Consensus 121 ~~~~~a~~~g~~~~~~~~~~--~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~ 198 (433)
T 1h6d_A 121 KAKIVAAEYGVDPRKIYDYS--NFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAK 198 (433)
T ss_dssp HHHHHHHHTTCCGGGEECSS--SGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccccccC--CHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHH
Confidence 45667788887520 00121 22 3444457999999999999999999999999999999988889999999888877
Q ss_pred hc
Q psy17999 131 QY 132 (335)
Q Consensus 131 ~g 132 (335)
+.
T Consensus 199 ~~ 200 (433)
T 1h6d_A 199 AA 200 (433)
T ss_dssp HH
T ss_pred Hh
Confidence 63
No 251
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=82.43 E-value=42 Score=34.17 Aligned_cols=146 Identities=10% Similarity=0.108 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCceEeccCC------------------------h----------------hhHHHHHhCCCCEEEE
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD------------------------Q----------------VSFDFLLSANVPFIKI 88 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd------------------------~----------------~svd~l~~l~v~~~KI 88 (335)
+.|+++.+.+++.|-.++.-.|. + +++..+.+.|.|.++|
T Consensus 81 ~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~vei 160 (671)
T 1ps9_A 81 PHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEV 160 (671)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57899999999999877665443 1 3345566789999999
Q ss_pred cCCC----------CCC-----------------HHHHHHHHhc---CCcEEEeC-------CCCCCHHHHHHHHHHHHh
Q psy17999 89 GSGD----------SNN-----------------IPLIKYAASK---QKPLIIST-------GMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 89 aS~d----------~~n-----------------~~LL~~~a~~---gkPvilSt-------G~~~tl~Ei~~Av~~i~~ 131 (335)
..+. .+| ..+++++.+. ++||.+.. |+. ++++....++.+..
T Consensus 161 h~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~-~~~~~~~~a~~l~~ 239 (671)
T 1ps9_A 161 MGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGG-TFAETVELAQAIEA 239 (671)
T ss_dssp EECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCC-CHHHHHHHHHHHHH
T ss_pred ccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCC-CHHHHHHHHHHHHh
Confidence 6542 122 3445555442 67887632 344 78888777777766
Q ss_pred cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC----ccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHH
Q psy17999 132 YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP----YHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAA 207 (335)
Q Consensus 132 g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~----~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aA 207 (335)
.+- ..+.+..|.. -..+|+. ....++..+..+|+.+ ++||.-.+--.....+..+
T Consensus 240 ~g~--d~i~v~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~ 298 (671)
T 1ps9_A 240 AGA--TIINTGIGWH------------------EARIPTIATPVPRGAFSWVTRKLKGHV-SLPLVTTNRINDPQVADDI 298 (671)
T ss_dssp HTC--SEEEEEECBT------------------TCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEEECSSCCSHHHHHHH
T ss_pred cCC--CEEEcCCCcc------------------ccccccccccCCcchHHHHHHHHHHhc-CceEEEeCCCCCHHHHHHH
Confidence 222 2222222111 0112211 1124567788899988 8999665554456666777
Q ss_pred HHcC-CcEEE
Q psy17999 208 VAMG-AQIIE 216 (335)
Q Consensus 208 valG-A~vIE 216 (335)
++-| |+.|-
T Consensus 299 l~~g~aD~V~ 308 (671)
T 1ps9_A 299 LSRGDADMVS 308 (671)
T ss_dssp HHTTSCSEEE
T ss_pred HHcCCCCEEE
Confidence 7887 77554
No 252
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=82.41 E-value=4 Score=38.33 Aligned_cols=75 Identities=9% Similarity=0.043 Sum_probs=56.1
Q ss_pred HHHHHHHHHHcCCceEec-c---CChhhHHHHHhCCCCEEEEcCCC-------------------------CCCHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTAS-A---MDQVSFDFLLSANVPFIKIGSGD-------------------------SNNIPLIKY 101 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~st-p---fd~~svd~l~~l~v~~~KIaS~d-------------------------~~n~~LL~~ 101 (335)
+..+.+..+ .+++++.- + ++.+.+..+.+.|+|++-|.... ...+.+|..
T Consensus 171 ~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 249 (332)
T 1vcf_A 171 VERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILE 249 (332)
T ss_dssp HHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHH
T ss_pred HHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHH
Confidence 445555555 78998887 6 88899999999999999994421 122445555
Q ss_pred HHhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 102 AASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 102 ~a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+. +.|||.+-|.. +.+++.+++.
T Consensus 250 v~~~~~~ipvia~GGI~-~~~d~~kal~ 276 (332)
T 1vcf_A 250 VREVLPHLPLVASGGVY-TGTDGAKALA 276 (332)
T ss_dssp HHHHCSSSCEEEESSCC-SHHHHHHHHH
T ss_pred HHHhcCCCeEEEECCCC-CHHHHHHHHH
Confidence 5543 69999999999 9999998876
No 253
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=82.41 E-value=8.8 Score=33.92 Aligned_cols=85 Identities=7% Similarity=0.041 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh--h----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ--V----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~--~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.+++.|..++....+. + ..+.+.+.++|.+-+.+.+... +.++.+.+.+.|+++--....
T Consensus 27 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~ 105 (288)
T 3gv0_A 27 QMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND-PRVRFMTERNMPFVTHGRSDMGIEHA 105 (288)
T ss_dssp HHHHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC-HHHHHHHHTTCCEEEESCCCSSCCCE
T ss_pred HHHHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc-HHHHHHhhCCCCEEEECCcCCCCCCc
Confidence 456678889999999887765432 1 2344556789999888766555 788899899999886322110
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 106 ~V~~D~~~~g~~a~~~L~~~G~~ 128 (288)
T 3gv0_A 106 FHDFDNEAYAYEAVERLAQCGRK 128 (288)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCC
T ss_pred EEEeCcHHHHHHHHHHHHHCCCC
Confidence 23345667777776 554
No 254
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=82.35 E-value=3 Score=38.63 Aligned_cols=57 Identities=11% Similarity=0.249 Sum_probs=50.4
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 117 (329)
T 3evn_A 61 DMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC 117 (329)
T ss_dssp HHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc
Confidence 344445799999999999999999999999999999999988999999998887763
No 255
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=82.31 E-value=10 Score=34.44 Aligned_cols=86 Identities=10% Similarity=0.045 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC-CC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG-ML----- 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG-~~----- 116 (335)
+-+..+.+.|++.|..++... .|.+ .++.+.+.++|.+-+.+.+....++++.+.+.+.|+++--. ..
T Consensus 80 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 159 (338)
T 3dbi_A 80 ELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSH 159 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSSSGGG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCCCCCCCC
Confidence 456778889999998776544 3333 34566667899999988877776677777788999776432 11
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |+.
T Consensus 160 ~V~~D~~~~~~~a~~~L~~~G~~ 182 (338)
T 3dbi_A 160 SVWCDHKQTSFNAVAELINAGHQ 182 (338)
T ss_dssp EECBCHHHHHHHHHHHHHHTTCC
T ss_pred EEEEChHHHHHHHHHHHHHCCCC
Confidence 0 23345567777766 554
No 256
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=82.29 E-value=9.8 Score=29.17 Aligned_cols=63 Identities=14% Similarity=0.268 Sum_probs=45.1
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSL 253 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~al 253 (335)
.+..+..|++.+|++|| .+|++.. ......|..+||. +|.|- +++++|...++.+.+-....
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kP---------------~~~~~l~~~i~~~~~~~~~~ 129 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIVISAFSE-MKYFIKAIELGVHLFLPKP---------------IEPGRLMETLEDFRHIKLAK 129 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCCCC-HHHHHHHHHHCCSEECCSS---------------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEecCcC-hHHHHHHHhCCcceeEcCC---------------CCHHHHHHHHHHHHHHHhcC
Confidence 46778889998888988 5666654 4555678899998 66642 34778888888887766544
Q ss_pred C
Q psy17999 254 G 254 (335)
Q Consensus 254 G 254 (335)
+
T Consensus 130 ~ 130 (137)
T 3hdg_A 130 E 130 (137)
T ss_dssp C
T ss_pred C
Confidence 3
No 257
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=82.09 E-value=3.9 Score=40.90 Aligned_cols=87 Identities=13% Similarity=0.283 Sum_probs=66.1
Q ss_pred CHHHHHHHHHHHHHcC--CceEeccCChhhHHHHH---hCCCCEEEEcCCCCC------CHH-----HHHHHHhcCCcEE
Q psy17999 47 SQEEYVMLQQCADQVD--IMFTASAMDQVSFDFLL---SANVPFIKIGSGDSN------NIP-----LIKYAASKQKPLI 110 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G--i~f~stpfd~~svd~l~---~l~v~~~KIaS~d~~------n~~-----LL~~~a~~gkPvi 110 (335)
+.++..+++++.++.| +.+++-.-..++++-+. +. .|.+-||-+|+. ..| +++++.+.|||||
T Consensus 207 ~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~-sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi 285 (461)
T 3qtg_A 207 SCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQC-SDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIA 285 (461)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHT-CSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHh-cccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 5788888888888876 77888888888865444 34 789999988763 444 4455667899999
Q ss_pred EeCCC--------CCCHHHHHHHHHHHHhcCC
Q psy17999 111 ISTGM--------LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 111 lStG~--------~~tl~Ei~~Av~~i~~g~~ 134 (335)
+.|-| .||-.|+-.+++.+..|..
T Consensus 286 ~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaD 317 (461)
T 3qtg_A 286 VATQLLDSMQSSPIPTRAEINDVFTTASMGVD 317 (461)
T ss_dssp EESSSSGGGGTCSSCCHHHHHHHHHHHHTTCS
T ss_pred EeccchHhhccCCCccHHHHHHHHHHHHhCCc
Confidence 97655 3699999999999887643
No 258
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=82.03 E-value=3.6 Score=40.77 Aligned_cols=75 Identities=13% Similarity=0.210 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCc---eEeccCChhhH-HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcC------CcEEEeCCCCCCHHH
Q psy17999 52 VMLQQCADQVDIM---FTASAMDQVSF-DFLLSANVPFIKIGSGDSNNIPLIKYAASKQ------KPLIISTGMLPSIEH 121 (335)
Q Consensus 52 ~~L~~~~~~~Gi~---f~stpfd~~sv-d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~g------kPvilStG~~~tl~E 121 (335)
....+.++++|+. +.. +. +++.+-++|++-|++.+-.+.+++.++.+.| |+|++...++.+++|
T Consensus 80 ~~a~~~a~~~g~~~~~~~~------d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~e 153 (479)
T 2nvw_A 80 KSSLQTIEQLQLKHATGFD------SLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQ 153 (479)
T ss_dssp HHHHHHHHHTTCTTCEEES------CHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHH
T ss_pred HHHHHHHHHcCCCcceeeC------CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHH
Confidence 3455677788875 322 23 4455567999999999999999999999999 999999998889999
Q ss_pred HHHHHHHHHhc
Q psy17999 122 VDNIYTTVKQY 132 (335)
Q Consensus 122 i~~Av~~i~~g 132 (335)
.++.++..++.
T Consensus 154 a~~l~~~a~~~ 164 (479)
T 2nvw_A 154 AEELYSISQQR 164 (479)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHc
Confidence 99999887763
No 259
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.99 E-value=23 Score=31.60 Aligned_cols=120 Identities=14% Similarity=0.194 Sum_probs=83.1
Q ss_pred HHHHHcCCceEeccCChhh----HHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 56 QCADQVDIMFTASAMDQVS----FDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 56 ~~~~~~Gi~f~stpfd~~s----vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
+..++.+|.-+....+.+. ++.+.+.|++++++.-.+..-...++++++.-..+++-.|.-.+.++++.|++.
T Consensus 12 ~~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~a--- 88 (224)
T 1vhc_A 12 EKLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSS--- 88 (224)
T ss_dssp HHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHH---
T ss_pred HHHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHC---
Confidence 4566788888777777664 456667799999999887777888888887655677777754478888888664
Q ss_pred cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCe--ecCCCCCChHHHHHHHH
Q psy17999 132 YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI--GYSGHENGVHVCYAAVA 209 (335)
Q Consensus 132 g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV--G~SdHt~g~~~~~aAva 209 (335)
|. +++ |. | ..|+..+..-++ + +.++ | -|| ..-...|..
T Consensus 89 GA------------------------d~v--~~----p----~~d~~v~~~ar~-~-g~~~i~G--v~t--~~e~~~A~~ 128 (224)
T 1vhc_A 89 GA------------------------DFV--VT----P----GLNPKIVKLCQD-L-NFPITPG--VNN--PMAIEIALE 128 (224)
T ss_dssp TC------------------------SEE--EC----S----SCCHHHHHHHHH-T-TCCEECE--ECS--HHHHHHHHH
T ss_pred CC------------------------CEE--EE----C----CCCHHHHHHHHH-h-CCCEEec--cCC--HHHHHHHHH
Confidence 32 333 21 1 256676777776 7 6665 6 333 444577899
Q ss_pred cCCcEEEec
Q psy17999 210 MGAQIIEKH 218 (335)
Q Consensus 210 lGA~vIEkH 218 (335)
+||+.|=-|
T Consensus 129 ~Gad~vk~F 137 (224)
T 1vhc_A 129 MGISAVKFF 137 (224)
T ss_dssp TTCCEEEET
T ss_pred CCCCEEEEe
Confidence 999977753
No 260
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=81.56 E-value=2.3 Score=40.15 Aligned_cols=56 Identities=9% Similarity=0.138 Sum_probs=50.7
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ 131 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~ 131 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++
T Consensus 62 ~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~ 117 (359)
T 3m2t_A 62 AMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARR 117 (359)
T ss_dssp HHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH
Confidence 45556789999999999999999999999999999999998899999999988776
No 261
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=81.29 E-value=19 Score=36.72 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=45.3
Q ss_pred cCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-CCcEEEe
Q psy17999 61 VDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-QKPLIIS 112 (335)
Q Consensus 61 ~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-gkPvilS 112 (335)
.++.+...-|..+-++.+.+.|+++|===|+...+..++.-+|+. |.|+|+.
T Consensus 310 ~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 310 DKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp GGEEEEEECCCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEE
T ss_pred CCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEE
Confidence 388889999999999999999999997666655577899999999 9999997
No 262
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=81.08 E-value=11 Score=35.84 Aligned_cols=77 Identities=10% Similarity=0.169 Sum_probs=56.3
Q ss_pred HHHHHHHHHcCCceEec-----cCChhhHHHHHhCCCC---EEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 52 VMLQQCADQVDIMFTAS-----AMDQVSFDFLLSANVP---FIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~st-----pfd~~svd~l~~l~v~---~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
+.+....+..++++... -++.+.++...+.+.+ .+-=.+.+ +...++..+++.|-|||+.+ +. +++...
T Consensus 119 ~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~-~~~~m~~laa~~g~~vVlmh-~~-d~~~~~ 195 (323)
T 4djd_D 119 ATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQE-NYKSLTAACMVHKHNIIARS-PL-DINICK 195 (323)
T ss_dssp HHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTT-BCHHHHHHHHHHTCEEEEEC-SS-CHHHHH
T ss_pred HHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcc-cHHHHHHHHHHhCCeEEEEc-cc-hHHHHH
Confidence 34555556679999999 8899999988887754 55555555 34568888889999999976 34 677777
Q ss_pred HHHHHHHh
Q psy17999 124 NIYTTVKQ 131 (335)
Q Consensus 124 ~Av~~i~~ 131 (335)
+.++.+.+
T Consensus 196 ~l~~~a~~ 203 (323)
T 4djd_D 196 QLNILINE 203 (323)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 77666665
No 263
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=80.99 E-value=7.2 Score=36.56 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=44.0
Q ss_pred CchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q psy17999 176 NLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSL 253 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~al 253 (335)
.+..+..+++..+++||.-++--....-...|+++||+.+- +-|-..- ..|.. --.+-++.+.+.++..-..+
T Consensus 243 ~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~~G~~----gv~~~~~~l~~el~~~m~~~ 317 (332)
T 1vcf_A 243 TARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-LEGAE----RVAAWIGDYLEELRTALFAI 317 (332)
T ss_dssp HHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-TTCHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-hccHH----HHHHHHHHHHHHHHHHHHHh
Confidence 46677888888767999666544445555668889998443 2222110 11210 00134566667777777777
Q ss_pred CCC
Q psy17999 254 GSP 256 (335)
Q Consensus 254 G~~ 256 (335)
|..
T Consensus 318 G~~ 320 (332)
T 1vcf_A 318 GAR 320 (332)
T ss_dssp TCS
T ss_pred CCC
Confidence 753
No 264
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=80.79 E-value=26 Score=31.05 Aligned_cols=86 Identities=9% Similarity=0.031 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHcCCceEeccCC--hh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC----
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMD--QV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP---- 117 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd--~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~---- 117 (335)
.+-+..+.+.|++.|..++....+ .+ .++.+.+.++|.+-+.+.+..+.+.++.+.+ +.||++--....
T Consensus 31 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~~~~~~ 109 (303)
T 3kke_A 31 ADMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRVPGRVG 109 (303)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCCTTCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcCCCCCC
Confidence 345677889999999887765543 22 3455666789999999888776438888888 999887532210
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 110 ~V~~D~~~~g~~a~~~L~~~G~~ 132 (303)
T 3kke_A 110 SVILDDQKGGGIATEHLITLGHS 132 (303)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCC
T ss_pred EEEECcHHHHHHHHHHHHHCCCC
Confidence 23345567777776 554
No 265
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=80.71 E-value=14 Score=28.19 Aligned_cols=79 Identities=18% Similarity=0.121 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHH-cCCceEeccCC-hhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcEEEeCCCCCC
Q psy17999 47 SQEEYVMLQQCADQ-VDIMFTASAMD-QVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS----KQKPLIISTGMLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~-~Gi~f~stpfd-~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPvilStG~~~t 118 (335)
.......|.+..++ .|...+.+..+ .+.++.+.+..++++-+.. .+.+-+.+++.+.+ ...|||+-|+.. +
T Consensus 17 ~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~ 95 (143)
T 3cnb_A 17 DKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGAL-T 95 (143)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSC-C
T ss_pred CHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCC-C
Confidence 34556667777777 89884444444 4556777777788887764 35677899999987 367999999988 7
Q ss_pred HHHHHHHH
Q psy17999 119 IEHVDNIY 126 (335)
Q Consensus 119 l~Ei~~Av 126 (335)
.+.+..++
T Consensus 96 ~~~~~~~~ 103 (143)
T 3cnb_A 96 DDNVSRIV 103 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666554
No 266
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=80.62 E-value=17 Score=28.04 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~Ei 122 (335)
.....|....++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++.+. ..|||+-|+.. +.+..
T Consensus 15 ~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~-~~~~~ 93 (136)
T 3t6k_A 15 TVAEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG-DISAK 93 (136)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT-CHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC-CHHHH
Confidence 344566677778898877655556667888877788776643 466778999998763 67999999988 77776
Q ss_pred HHHHH
Q psy17999 123 DNIYT 127 (335)
Q Consensus 123 ~~Av~ 127 (335)
..+.+
T Consensus 94 ~~~~~ 98 (136)
T 3t6k_A 94 IAGFE 98 (136)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 267
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=80.57 E-value=10 Score=36.30 Aligned_cols=122 Identities=12% Similarity=0.170 Sum_probs=67.6
Q ss_pred CCCCcEEEeec---ccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQK---SCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
++|+|+|..-. |-...+++...-. ....|+.+ +.++..|..|-.+.+++.+...-|.+=.++++
T Consensus 172 ~aGfDgVeih~a~gYLl~qFlsp~~N~----R~D~yGGs---lenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 172 EAGFDGIELHAANGYLINQFIDSEANN----RSDEYGGS---LENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HTTCSEEEEECCTTSHHHHHHSGGGCC----CCSTTSSS---HHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HcCCCEEEEecccchhHhhccCCCccC----cCcccCcc---hhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 47999999854 1111222222100 01124444 23455676677777777663221222124432
Q ss_pred ----hhh----HHHHHhCCCCEEEEcCCCC-----CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Q psy17999 72 ----QVS----FDFLLSANVPFIKIGSGDS-----NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 72 ----~~s----vd~l~~l~v~~~KIaS~d~-----~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
.+. +..|++.|++++-+..+.. .++++++.+.+ .+.|||..-|. |.++. .+.+..|..
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi--~~~~a---~~~l~~g~a 316 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY--NAEKA---EQAINDGLA 316 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC--CHHHH---HHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC--CHHHH---HHHHHCCCc
Confidence 222 5677789999999987532 35778887776 47898877554 65554 445555533
No 268
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=80.16 E-value=15 Score=33.50 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHc-CCceEe----ccCCh-hhHHHHHhCCCCEEEEcCC------CC--------------C-------C
Q psy17999 49 EEYVMLQQCADQV-DIMFTA----SAMDQ-VSFDFLLSANVPFIKIGSG------DS--------------N-------N 95 (335)
Q Consensus 49 e~~~~L~~~~~~~-Gi~f~s----tpfd~-~svd~l~~l~v~~~KIaS~------d~--------------~-------n 95 (335)
+.+.++.+.+++. +++++. ...+. +-+..+++.|+|++.+..+ +. . +
T Consensus 150 ~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~ 229 (311)
T 1ep3_A 150 EVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA 229 (311)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH
Confidence 4444555555444 877765 33343 3367888999999999421 11 0 1
Q ss_pred HHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 96 IPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 96 ~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+++++.+ .+.|||.+-|.. +.+++.++++
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~-~~~d~~~~l~ 261 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVA-NAQDVLEMYM 261 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCC-SHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEECCcC-CHHHHHHHHH
Confidence 467777765 489999999999 8888887764
No 269
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=80.06 E-value=12 Score=29.32 Aligned_cols=66 Identities=9% Similarity=0.188 Sum_probs=48.3
Q ss_pred CchHHHHHHH--HCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy17999 176 NLNVIHTLRS--RYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQ 251 (335)
Q Consensus 176 nL~~i~~L~~--~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~ 251 (335)
.+..+..||+ .+|++|| .+|++.. ......|..+||. +|.|- +++++|...++.+...+.
T Consensus 74 g~~~~~~lr~~~~~~~~pii~~t~~~~-~~~~~~~~~~g~~~~l~KP---------------~~~~~l~~~i~~~~~~~~ 137 (152)
T 3heb_A 74 GIDILKLVKENPHTRRSPVVILTTTDD-QREIQRCYDLGANVYITKP---------------VNYENFANAIRQLGLFFS 137 (152)
T ss_dssp HHHHHHHHHHSTTTTTSCEEEEESCCC-HHHHHHHHHTTCSEEEECC---------------SSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccccCCCEEEEecCCC-HHHHHHHHHCCCcEEEeCC---------------CCHHHHHHHHHHHHHHHH
Confidence 3667888888 6778888 4566554 4455678899997 88873 346799999999988887
Q ss_pred HhCCCC
Q psy17999 252 SLGSPT 257 (335)
Q Consensus 252 alG~~~ 257 (335)
.+....
T Consensus 138 ~~~~~~ 143 (152)
T 3heb_A 138 VMQVPE 143 (152)
T ss_dssp TSCCCB
T ss_pred HcCCCc
Confidence 766543
No 270
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=80.02 E-value=2.5 Score=39.45 Aligned_cols=57 Identities=12% Similarity=0.293 Sum_probs=50.5
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+++|.++.++..++.
T Consensus 59 ~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 59 EVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp HHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 344555799999999999999999999999999999999998999999998887763
No 271
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=80.01 E-value=43 Score=32.04 Aligned_cols=39 Identities=13% Similarity=0.087 Sum_probs=27.5
Q ss_pred CchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 176 NLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
++..+..+|+.+ ++||.-.+-- ....+..+++-| |++|-
T Consensus 289 ~~~~~~~vr~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~ 328 (376)
T 1icp_A 289 CTESLVPMRKAY-KGTFIVAGGY-DREDGNRALIEDRADLVA 328 (376)
T ss_dssp CCCCSHHHHHHC-CSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHCCCCcEEe
Confidence 456678899999 8898544433 466677788887 77654
No 272
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=79.99 E-value=10 Score=33.49 Aligned_cols=85 Identities=11% Similarity=-0.062 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHcCCceEec-c--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC----
Q psy17999 49 EEYVMLQQCADQVDIMFTAS-A--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP---- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~st-p--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~---- 117 (335)
+-+..+.+.+++.|..++.. . .|.+ .++.+.+-++|.+-+.+.+..+ +.++.+.+.+.|+++--....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~ 103 (290)
T 3clk_A 25 QILDGIQEEAHKNGYNLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTD-DNLQLLQSSDVPYCFLSMGFDDDRP 103 (290)
T ss_dssp HHHHHHHHHHHTTTCEEEEEC----------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC--CCSC
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCH-HHHHHHHhCCCCEEEEcCCCCCCCC
Confidence 45677788899999887654 2 2322 3566666789998887776554 678888888999876432110
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 104 ~V~~D~~~~g~~a~~~L~~~G~~ 126 (290)
T 3clk_A 104 FISSDDEDIGYQATNLLINEGHR 126 (290)
T ss_dssp EEECCHHHHHHHHHHHHHTTTCC
T ss_pred EEEeChHHHHHHHHHHHHHcCCC
Confidence 12345667777776 544
No 273
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=79.98 E-value=38 Score=31.40 Aligned_cols=151 Identities=14% Similarity=0.128 Sum_probs=95.8
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEecc---CChhhH---HHHHhCCCCEEEEcCCC-----CCCHHHHHH---HHh-c
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASA---MDQVSF---DFLLSANVPFIKIGSGD-----SNNIPLIKY---AAS-K 105 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stp---fd~~sv---d~l~~l~v~~~KIaS~d-----~~n~~LL~~---~a~-~ 105 (335)
..|+.++..++.+.+.+. .+++++-+ -..+++ ..++++|+|++-+-..- .+.-.++++ +|+ +
T Consensus 62 ~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~ 141 (307)
T 3s5o_A 62 PFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS 141 (307)
T ss_dssp GGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc
Confidence 459999999999998874 46766544 223333 45567899998874432 344456555 444 6
Q ss_pred CCcEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHH
Q psy17999 106 QKPLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVI 180 (335)
Q Consensus 106 gkPvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i 180 (335)
++||||= ||..++.+.+.+.++ .+ +++-+--. .-|+..+
T Consensus 142 ~lPiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nIvgiKds--------sgd~~~~ 185 (307)
T 3s5o_A 142 PIPVVLYSVPANTGLDLPVDAVVTLSQ-----HP-----------------------NIVGMXDS--------GGDVTRI 185 (307)
T ss_dssp SSCEEEEECHHHHSCCCCHHHHHHHHT-----ST-----------------------TEEEEEEC--------SCCHHHH
T ss_pred CCCEEEEeCCcccCCCCCHHHHHHHhc-----CC-----------------------CEEEEEcC--------CCCHHHH
Confidence 8999984 687778888776542 22 33333322 2467778
Q ss_pred HHHHHHC--CCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 181 HTLRSRY--PDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 181 ~~L~~~f--p~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
..+.++. ++..| ||++.. ....++++||+ +|= -.+.+-|+.+.+|++.++
T Consensus 186 ~~~~~~~~~~~f~v-~~G~d~---~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 238 (307)
T 3s5o_A 186 GLIVHKTRKQDFQV-LAGSAG---FLMASYALGAVGGVC-------------ALANVLGAQVCQLERLCC 238 (307)
T ss_dssp HHHHHHTTTSSCEE-EESSGG---GHHHHHHHTCCEEEC-------------GGGGTCHHHHHHHHHHHH
T ss_pred HHHHHhccCCCeEE-EeCcHH---HHHHHHHcCCCEEEe-------------chhhhhHHHHHHHHHHHH
Confidence 7776655 24444 666543 34567789997 542 223456888888877654
No 274
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=79.70 E-value=6 Score=34.46 Aligned_cols=85 Identities=6% Similarity=-0.107 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHcCCceEeccC--Ch----hhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM--DQ----VSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf--d~----~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.+++.|..++.... |. +.++.+.+.++|.+-+.+.+.+. +.++.+.+.+.|+++--....
T Consensus 16 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~~~~~~iPvV~~~~~~~~~~~V 94 (276)
T 2h0a_A 16 RLVEGIEGVLLEQRYDLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTE-RFEEGRLPTERPVVLVDAQNPRYDSV 94 (276)
T ss_dssp HHHHHHHHHHGGGTCEEEECCCCSCCCCC---------CCCSEEEEESCCCC-------CCSCSSCEEEESSCCTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCCCH-HHHHHHhhcCCCEEEEeccCCCCCEE
Confidence 4467788899999988766433 22 23556666789998887776654 777877778999876432110
Q ss_pred ---CHHHHHHHHHHHHh-cCC
Q psy17999 118 ---SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 ---tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...+++++.+ |+.
T Consensus 95 ~~d~~~~~~~a~~~L~~~G~~ 115 (276)
T 2h0a_A 95 YLDNRLGGRLAGAYLARFPGP 115 (276)
T ss_dssp EECSHHHHHHHHHHHTTSSSC
T ss_pred EEccHHHHHHHHHHHHHcCCC
Confidence 34455667777766 544
No 275
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=79.57 E-value=14 Score=29.12 Aligned_cols=80 Identities=13% Similarity=0.116 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei 122 (335)
.......|.+..++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++.+. ..|||+-|+.. +.+.+
T Consensus 23 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~ 101 (153)
T 3hv2_A 23 QEVILQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP-DLKLI 101 (153)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC-CHHHH
T ss_pred CHHHHHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC-CHHHH
Confidence 44556677888888898877555556667888887788877654 467778999998775 67999999988 77777
Q ss_pred HHHHH
Q psy17999 123 DNIYT 127 (335)
Q Consensus 123 ~~Av~ 127 (335)
..+++
T Consensus 102 ~~~~~ 106 (153)
T 3hv2_A 102 AKAIN 106 (153)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 276
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=79.54 E-value=7.6 Score=37.67 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHcCCceEecc-CChhhHHHHHhCCCCEEEEcCCCCCCH----HHHHHHHhcCCcEEEe
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASA-MDQVSFDFLLSANVPFIKIGSGDSNNI----PLIKYAASKQKPLIIS 112 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stp-fd~~svd~l~~l~v~~~KIaS~d~~n~----~LL~~~a~~gkPvilS 112 (335)
+.+.-+.|.+.+++..++.++.. ||..-+....+.|+|.+-|-.+++-+. .+++.+.+.++||-+-
T Consensus 69 ~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 69 HKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp SHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEe
Confidence 55778889999999999999997 999999889999999999999988654 6778888899999885
No 277
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=79.38 E-value=28 Score=30.73 Aligned_cols=85 Identities=11% Similarity=0.131 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHcCCceEeccCChh------hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCC----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQV------SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPS---- 118 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~------svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~t---- 118 (335)
+-+..+.+.|++.|..++....+.. .++.+.+.++|.+-+.+.+.+. ++++.+.+.+.|+++--.....
T Consensus 29 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~ 107 (295)
T 3hcw_A 29 NVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEND-PIKQMLIDESMPFIVIGKPTSDIDHQ 107 (295)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTTC-HHHHHHHHTTCCEEEESCCCSSGGGG
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccCh-HHHHHHHhCCCCEEEECCCCccccCC
Confidence 4567788999999998876654432 2456667789999998776554 7888898999998764322101
Q ss_pred --------HHHHHHHHHHHHh-cCC
Q psy17999 119 --------IEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 119 --------l~Ei~~Av~~i~~-g~~ 134 (335)
.+-...|++++.+ |+.
T Consensus 108 ~~~V~~D~~~~~~~a~~~L~~~G~~ 132 (295)
T 3hcw_A 108 FTHIDNDNILASENLTRHVIEQGVD 132 (295)
T ss_dssp SCEEEECHHHHHHHHHHHHHHHCCS
T ss_pred ceEEecCcHHHHHHHHHHHHHcCCc
Confidence 2345667888776 655
No 278
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=79.34 E-value=8.9 Score=33.89 Aligned_cols=86 Identities=12% Similarity=0.109 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC-CC-C---
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG-ML-P--- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG-~~-~--- 117 (335)
+-+..+.+.|++.|..++... .|.+ .++.+.+.++|.+-+.+.+..+.++++.+.+.+.|+++--. .. .
T Consensus 37 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 116 (293)
T 2iks_A 37 RIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFT 116 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESCCCTTTCE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCccCcCCCC
Confidence 446677888999998876543 3332 24555667899999887776655678888888999876422 11 0
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |+.
T Consensus 117 ~V~~d~~~~~~~a~~~L~~~G~~ 139 (293)
T 2iks_A 117 SVVGADQDDAEMLAEELRKFPAE 139 (293)
T ss_dssp EEEECHHHHHHHHHHHHHTSCCS
T ss_pred EEEecCHHHHHHHHHHHHHCCCC
Confidence 12334557777776 544
No 279
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=79.30 E-value=20 Score=32.52 Aligned_cols=87 Identities=9% Similarity=0.024 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccC--Chh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC-----
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAM--DQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG----- 114 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpf--d~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG----- 114 (335)
+-.+-+..+.+.|++.|..++.... |.+ .++.+.+.++|.+-+.+.+... ++++.+.+.+.|+++-..
T Consensus 76 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~ 154 (339)
T 3h5o_A 76 VFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLADDG 154 (339)
T ss_dssp TTHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCCSSS
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecCCCC
Confidence 4456678889999999988776443 332 2455566789999888776554 788888889999886421
Q ss_pred -----CCCCHHHHHHHHHHHHh-cCC
Q psy17999 115 -----MLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 115 -----~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
.- ..+-...|++++.+ |+.
T Consensus 155 ~~~V~~D-~~~~~~~a~~~L~~~G~~ 179 (339)
T 3h5o_A 155 RCCVGFS-QEDAGAAITRHLLSRGKR 179 (339)
T ss_dssp CCEEECC-HHHHHHHHHHHHHHTTCC
T ss_pred CeEEEEC-HHHHHHHHHHHHHHCCCC
Confidence 11 23445667777776 554
No 280
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=79.24 E-value=7.4 Score=37.55 Aligned_cols=149 Identities=13% Similarity=0.185 Sum_probs=84.8
Q ss_pred cCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCC--CCHHHHHHHHhcCC-cEEEeCCCCCCHHH
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDS--NNIPLIKYAASKQK-PLIISTGMLPSIEH 121 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~--~n~~LL~~~a~~gk-PvilStG~~~tl~E 121 (335)
.|+.++-.++.+.-.+.|+..+-. ++.-. ..+..++++++..+ +.+..-+.+ ..++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~--------------------g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r~-~~~d 88 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEA--------------------GFAAASPGDFEAVNAIAKTITKSTVCSLSRA-IERD 88 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEE--------------------EEGGGCHHHHHHHHHHHTTCSSSEEEEEEES-SHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE--------------------eCCCCCHHHHHHHHHHHHhCCCCeEEEEecC-CHHH
Confidence 588888888887777777665533 32211 24556677666432 333333334 7899
Q ss_pred HHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCC------CCCc-cCCCc--hHHHHHHHHCCCCC
Q psy17999 122 VDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAY------PTPY-HDINL--NVIHTLRSRYPDIP 191 (335)
Q Consensus 122 i~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~Y------P~~~-~~~nL--~~i~~L~~~fp~~p 191 (335)
++.|++.+.. +.. .+.+.-.+|.. -... +.+.. ..+...++ + +..
T Consensus 89 i~~a~~al~~ag~~-----------------------~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~-~-g~~ 143 (370)
T 3rmj_A 89 IRQAGEAVAPAPKK-----------------------RIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIARE-Y-TDD 143 (370)
T ss_dssp HHHHHHHHTTSSSE-----------------------EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTT-T-CSC
T ss_pred HHHHHHHHhhCCCC-----------------------EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCE
Confidence 9999987765 332 34443344321 1111 11111 12333333 4 455
Q ss_pred eecC-----CCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 192 IGYS-----GHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 192 VG~S-----dHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
|-|+ -++.. ..++.++..+||+.|= + +|-.-.++|.++.++|+.+++.
T Consensus 144 v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~----l------~DT~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 144 VEFSCEDALRSEIDFLAEICGAVIEAGATTIN----I------PDTVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHHTCCEEE----E------ECSSSCCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCccCHHHHHHHHHHHHHcCCCEEE----e------cCccCCcCHHHHHHHHHHHHHh
Confidence 5443 12222 4556778899998654 2 2666678999999999988763
No 281
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=79.07 E-value=10 Score=33.90 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=83.1
Q ss_pred hcCCHHHHHHHHHHH-HH--cCCceEeccCCh-hhHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEeCCCCCC
Q psy17999 44 LEFSQEEYVMLQQCA-DQ--VDIMFTASAMDQ-VSFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIISTGMLPS 118 (335)
Q Consensus 44 ~el~~e~~~~L~~~~-~~--~Gi~f~stpfd~-~svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilStG~~~t 118 (335)
+.++.+..+.|++.. .+ .++.++ +.++ .-++.+.+.|+|++-++.-...+ ..+++++-+.|+.+.++...+ |
T Consensus 47 ~~~G~~~v~~ir~~~~~~~~~dvhLm--v~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~-t 123 (228)
T 3ovp_A 47 ITFGHPVVESLRKQLGQDPFFDMHMM--VSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG-T 123 (228)
T ss_dssp BCBCHHHHHHHHHHHCSSSCEEEEEE--CSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTT-S
T ss_pred cccCHHHHHHHHHhhCCCCcEEEEEE--eCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCC-C
Confidence 456778888887775 33 233333 2333 34777888999999998754443 357788888898888887766 4
Q ss_pred HHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCC----CccCCCchHHHHHHHHCCCCCeec
Q psy17999 119 IEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPT----PYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 119 l~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~----~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
..|... + +.. .. +++++.++ +|- ......+..|..||+..++++|.-
T Consensus 124 ~~e~l~--~-~l~-~~-----------------------D~Vl~msv--~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~V 174 (228)
T 3ovp_A 124 SVEYLA--P-WAN-QI-----------------------DMALVMTV--EPGFGGQKFMEDMMPKVHWLRTQFPSLDIEV 174 (228)
T ss_dssp CGGGTG--G-GGG-GC-----------------------SEEEEESS--CTTTCSCCCCGGGHHHHHHHHHHCTTCEEEE
T ss_pred CHHHHH--H-Hhc-cC-----------------------CeEEEeee--cCCCCCcccCHHHHHHHHHHHHhcCCCCEEE
Confidence 322211 1 111 11 56665555 331 122234667889998886676632
Q ss_pred CCCCCChHHHHHHHHcCCcEE
Q psy17999 195 SGHENGVHVCYAAVAMGAQII 215 (335)
Q Consensus 195 SdHt~g~~~~~aAvalGA~vI 215 (335)
-+ ......+..++..||+++
T Consensus 175 dG-GI~~~t~~~~~~aGAd~~ 194 (228)
T 3ovp_A 175 DG-GVGPDTVHKCAEAGANMI 194 (228)
T ss_dssp ES-SCSTTTHHHHHHHTCCEE
T ss_pred eC-CcCHHHHHHHHHcCCCEE
Confidence 11 112445566889999954
No 282
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=78.88 E-value=14 Score=36.38 Aligned_cols=129 Identities=12% Similarity=0.103 Sum_probs=70.9
Q ss_pred CCc-EEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCC-CCccCCCchHHHH
Q psy17999 106 QKP-LIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYP-TPYHDINLNVIHT 182 (335)
Q Consensus 106 gkP-vilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP-~~~~~~nL~~i~~ 182 (335)
.+| |+++.....+.+++...++.+.+ |-. -|++.-+.... .+++...+ -...|- .+.....++.|..
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaD--gIiv~Ntt~~r--~dl~~~~~------~~GGlSG~a~~p~al~~I~~ 337 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNID--GMIISNTTTQI--NDIKSFEN------KKGGVSGAKLKDISTKFICE 337 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCS--EEEECCCBSCC--CCCGGGTT------CCSEEEEGGGHHHHHHHHHH
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCc--EEEEeCCCccc--cccccccc------ccCCcCCccchHHHHHHHHH
Confidence 689 99998866687888888888877 533 11111111110 00000000 000010 1112344678899
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLG 254 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG 254 (335)
+++..+ ++||.-++=-....-+..++.+||+.+-- -+.+-. + .|.-++++.+.+++.-...|
T Consensus 338 v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqI----gra~l~-~-----GP~~~~~i~~~L~~~l~~~G 400 (415)
T 3i65_A 338 MYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL----YSCLVF-N-----GMKSAVQIKRELNHLLYQRG 400 (415)
T ss_dssp HHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEE----SHHHHH-H-----GGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE----cHHHHh-c-----CHHHHHHHHHHHHHHHHHcC
Confidence 998874 58985544444455566778899997662 111100 0 25578888888877666655
No 283
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.69 E-value=7.1 Score=39.18 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=66.1
Q ss_pred hhhHHHHHhCCCCEEEEcCCCCCCH---HHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCC
Q psy17999 72 QVSFDFLLSANVPFIKIGSGDSNNI---PLIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYP 146 (335)
Q Consensus 72 ~~svd~l~~l~v~~~KIaS~d~~n~---~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~ 146 (335)
.+.++.|.+.|++++-|.+.+-... .+++++.+. +.||++.. .. |.++...+++ .|-. .+.. |..
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-v~-t~e~a~~~~~---aGad---~i~v--g~g 327 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-VA-TAEATKALIE---AGAN---VVKV--GIG 327 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-EC-SHHHHHHHHH---HTCS---EEEE--CSS
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-ec-cHHHHHHHHH---hCCC---EEEE--CCC
Confidence 5667788899999999987765333 466666665 57888753 34 6766655544 2432 1111 111
Q ss_pred CCCCCcccccCceEEeeecCCCCCCccCCCchHHHHH---HHHCCCCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 147 TPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTL---RSRYPDIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 147 ~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L---~~~fp~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+ -||++.--+.....++..+..+ .+.+ ++||.-++--....-...|.++||+
T Consensus 328 ~g-------------si~~~~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~GA~ 383 (511)
T 3usb_A 328 PG-------------SICTTRVVAGVGVPQLTAVYDCATEARKH-GIPVIADGGIKYSGDMVKALAAGAH 383 (511)
T ss_dssp CS-------------TTCCHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred Cc-------------cccccccccCCCCCcHHHHHHHHHHHHhC-CCcEEEeCCCCCHHHHHHHHHhCch
Confidence 10 0344321111112344444443 3445 7999766554445555568899998
No 284
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=78.61 E-value=12 Score=32.87 Aligned_cols=85 Identities=9% Similarity=0.072 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHcCCceEeccCC--hh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD--QV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd--~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.|++.|..++....+ .+ .++.+.+.++|.+-+.+.+. +.++++.+.+.+.|+++--....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 103 (291)
T 3egc_A 25 EVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNRELRIPGCG 103 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCCCCTTCE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEecccCCCCCC
Confidence 44677888999999887776543 22 24555667899998888777 77889999889999876432210
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 104 ~V~~D~~~~g~~a~~~L~~~G~~ 126 (291)
T 3egc_A 104 AVLSENVRGARTAVEYLIARGHT 126 (291)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCC
T ss_pred EEEECcHHHHHHHHHHHHHcCCC
Confidence 23445567777776 554
No 285
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=78.47 E-value=4 Score=40.09 Aligned_cols=65 Identities=6% Similarity=0.084 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHcCCceEe-------c--------cCChhhHHHHHhCCCCEEEEcCCCCCCHH--------HHHHHHhc
Q psy17999 49 EEYVMLQQCADQVDIMFTA-------S--------AMDQVSFDFLLSANVPFIKIGSGDSNNIP--------LIKYAASK 105 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~s-------t--------pfd~~svd~l~~l~v~~~KIaS~d~~n~~--------LL~~~a~~ 105 (335)
..++.|.++.+++|+.|-. | -+-+..++...+-|||++|+--+...... +=+++.++
T Consensus 84 ~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~t 163 (404)
T 3hg3_A 84 HGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRT 163 (404)
T ss_dssp THHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhc
Confidence 3699999999999999863 1 12334566778899999999987665543 23567789
Q ss_pred CCcEEEeC
Q psy17999 106 QKPLIIST 113 (335)
Q Consensus 106 gkPvilSt 113 (335)
|+||++|.
T Consensus 164 GRpi~~sc 171 (404)
T 3hg3_A 164 GRSIVYSC 171 (404)
T ss_dssp TCCCEEEE
T ss_pred CCCEEEEe
Confidence 99999995
No 286
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=78.46 E-value=7.5 Score=39.50 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHHcC---------CceEeccCChhhHHHHHh---CCCCEEEEcCCCCC------CHHH-----HHHHH
Q psy17999 47 SQEEYVMLQQCADQVD---------IMFTASAMDQVSFDFLLS---ANVPFIKIGSGDSN------NIPL-----IKYAA 103 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G---------i~f~stpfd~~svd~l~~---l~v~~~KIaS~d~~------n~~L-----L~~~a 103 (335)
+.++..+++++.++.| +.+++-.-..++++-+.+ . .|.+-|+=+||- ..|+ ++.+-
T Consensus 240 ~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~-sDgIMVARGDLgvEip~e~vp~~QK~II~~c~ 318 (526)
T 4drs_A 240 NGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE-SDGIMVARGDLGMEIPPEKIFVAQKCMISKCN 318 (526)
T ss_dssp SHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHH-SSEEEEECTTHHHHSCGGGHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhh-ccEEEEECCcccccCCHHHHHHHHHHHHHHHH
Confidence 4567777777777655 557777777777654443 3 688888888753 4454 45566
Q ss_pred hcCCcEEEeCCC--------CCCHHHHHHHHHHHHhcCC
Q psy17999 104 SKQKPLIISTGM--------LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 104 ~~gkPvilStG~--------~~tl~Ei~~Av~~i~~g~~ 134 (335)
+.|||||+.|-| .||-+|+-.+++.+..|..
T Consensus 319 ~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaD 357 (526)
T 4drs_A 319 VAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSD 357 (526)
T ss_dssp HHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCS
T ss_pred HcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCc
Confidence 779999998865 4799999999998887654
No 287
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=78.35 E-value=3.5 Score=38.27 Aligned_cols=69 Identities=7% Similarity=0.119 Sum_probs=50.8
Q ss_pred HHHcCCceEeccCChhhHHHHHhCCCCEEEEcC-----------------------------C--------CCCCHHHHH
Q psy17999 58 ADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS-----------------------------G--------DSNNIPLIK 100 (335)
Q Consensus 58 ~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS-----------------------------~--------d~~n~~LL~ 100 (335)
++++|+.++.++.+.+.+....+.|++++.+.. . .-.++.+++
T Consensus 121 ~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~ 200 (305)
T 2nv1_A 121 KNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLL 200 (305)
T ss_dssp GGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHH
T ss_pred HhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHH
Confidence 456788888888887666666688999999821 1 225678898
Q ss_pred HHHh-cCCcEE--EeCCCCCCHHHHHHHHH
Q psy17999 101 YAAS-KQKPLI--ISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 101 ~~a~-~gkPvi--lStG~~~tl~Ei~~Av~ 127 (335)
++.+ .+.||+ .+-|.. |.+++..+.+
T Consensus 201 ~i~~~~~iPvi~~a~GGI~-~~~d~~~~~~ 229 (305)
T 2nv1_A 201 QIKKDGKLPVVNFAAGGVA-TPADAALMMQ 229 (305)
T ss_dssp HHHHHTSCSSCEEBCSCCC-SHHHHHHHHH
T ss_pred HHHHhcCCCEEEEeccCCC-CHHHHHHHHH
Confidence 8887 578998 777777 8988776543
No 288
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=78.33 E-value=23 Score=31.41 Aligned_cols=85 Identities=11% Similarity=0.067 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcCCceEeccCChh------hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQV------SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~------svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.|++.|..++....+.. .++.+.+.++|.+-+.+.+... +.++.+.+.+.||++--....
T Consensus 44 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~ 122 (305)
T 3huu_A 44 DVLNGINQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD-PIEHLLNEFKVPYLIVGKSLNYENII 122 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC-HHHHHHHHTTCCEEEESCCCSSTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc-HHHHHHHHcCCCEEEECCCCcccCCc
Confidence 4567788899999998877654432 2455666789999998777655 888999899999876432110
Q ss_pred -----CHHHHHHHHHHHHh-cCC
Q psy17999 118 -----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |+.
T Consensus 123 ~V~~D~~~~g~~a~~~L~~~G~~ 145 (305)
T 3huu_A 123 HIDNDNIDAAYQLTQYLYHLGHR 145 (305)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeCHHHHHHHHHHHHHHCCCC
Confidence 12345667777776 554
No 289
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=78.23 E-value=11 Score=36.21 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHHcCCceEe-ccCChhhHHHHHhCCCCEEEEcC-------CCCCCHHHHHHHHhc---CCcEEEeCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTA-SAMDQVSFDFLLSANVPFIKIGS-------GDSNNIPLIKYAASK---QKPLIISTG 114 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~s-tpfd~~svd~l~~l~v~~~KIaS-------~d~~n~~LL~~~a~~---gkPvilStG 114 (335)
++++.+++|+ +..+++++. .+.+.+.+..+.+.|+|+|.+.. +....+.+|.++.+. ..|||.+-|
T Consensus 204 ~~w~~i~~lr---~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GG 280 (352)
T 3sgz_A 204 FCWNDLSLLQ---SITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGG 280 (352)
T ss_dssp CCHHHHHHHH---HHCCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESS
T ss_pred CCHHHHHHHH---HhcCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECC
Confidence 4555555554 456777653 46788889999999999999822 123456777776542 689999999
Q ss_pred CCCCHHHHHHHHH
Q psy17999 115 MLPSIEHVDNIYT 127 (335)
Q Consensus 115 ~~~tl~Ei~~Av~ 127 (335)
.. +-.++.+|+.
T Consensus 281 I~-~g~Dv~kaLa 292 (352)
T 3sgz_A 281 VR-TGTDVLKALA 292 (352)
T ss_dssp CC-SHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 99 9999998865
No 290
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=78.15 E-value=25 Score=32.18 Aligned_cols=148 Identities=20% Similarity=0.221 Sum_probs=95.2
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCC---hhhHH---HHHhCCCCEEEEcCCCC----CCHHHH---HHHHhcCCcEE
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMD---QVSFD---FLLSANVPFIKIGSGDS----NNIPLI---KYAASKQKPLI 110 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d~----~n~~LL---~~~a~~gkPvi 110 (335)
..|+.++..++.+.+.+ .+++++-+-+ .++++ .++++|+|.+-+-..-. +.-.++ +++|+ ++||+
T Consensus 45 ~~Ls~~Er~~v~~~~~~-rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~-~lPii 122 (283)
T 2pcq_A 45 VHLTPEERARGLRALRP-RKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE-KMPLF 122 (283)
T ss_dssp GGSCHHHHHHHHHTCCC-SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH-HSCEE
T ss_pred hhcCHHHHHHHHHHHHh-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc-CCCEE
Confidence 45999999999999988 8888766543 44444 45678999987765533 222344 56888 99999
Q ss_pred Ee-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH
Q psy17999 111 IS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS 185 (335)
Q Consensus 111 lS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~ 185 (335)
|= ||...+.+.+.+.++ .+ +++-+--+ .-|+..+..+++
T Consensus 123 lYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nivgiKds--------sgd~~~~~~~~~ 166 (283)
T 2pcq_A 123 LYHVPQNTKVDLPLEAVEALAP-----HP-----------------------NVLGIKDS--------SGDLSRIAFYQA 166 (283)
T ss_dssp EEECHHHHCCCCCHHHHHHHTT-----ST-----------------------TEEEEEEC--------SCCHHHHHHHHH
T ss_pred EEeCccccCcCCCHHHHHHHhc-----CC-----------------------CEEEEEEC--------CCCHHHHHHHHh
Confidence 93 787778888776542 22 33322211 246777777776
Q ss_pred HCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 186 RYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 186 ~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
.+ +..| ||++. .....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 167 -~~~~f~v-~~G~d---~~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~ 212 (283)
T 2pcq_A 167 -RLQEFRV-YTGHA---PTFLGALALGAEGGIL-------------AAANLAPRAYRALLDHFR 212 (283)
T ss_dssp -HCSSCEE-EECCG---GGHHHHHHTTCCEEEC-------------GGGGTCHHHHHHHHHHHH
T ss_pred -cCCCEEE-EECcH---HHHHHHHHcCCCEEEe-------------CHHHhCHHHHHHHHHHHH
Confidence 43 3444 66653 234557789987 543 223456888888876654
No 291
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=77.84 E-value=20 Score=28.07 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=32.8
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccC
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFT 220 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~t 220 (335)
.+..+..+++.+|++|| .+|++.. ......|..+||. +|.|-++
T Consensus 66 g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~kp~~ 111 (153)
T 3cz5_A 66 GIEATRHIRQWDGAARILIFTMHQG-SAFALKAFEAGASGYVTKSSD 111 (153)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCS-HHHHHHHHHTTCSEEEETTSC
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC-HHHHHHHHHCCCcEEEecCCC
Confidence 36678899999888998 5666554 5556678899998 8887543
No 292
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=77.76 E-value=7.2 Score=37.53 Aligned_cols=116 Identities=9% Similarity=0.037 Sum_probs=67.5
Q ss_pred CCCCcEEEeecc---cccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQKS---CLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
+||.|+|...-- -.+.++++..- .....||.+ +.++..|..|-.+.+++.+-..-|.+=.++++
T Consensus 164 ~aGfDgVEih~a~GYLl~QFLSp~~N----~RtD~yGGs---lenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 164 AAGFDGVEIHGANGYLLDQFLQSSTN----QRTDRYGGS---LENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HTTCSEEEEECCTTSHHHHHHSTTTC----CCCSTTSSS---HHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HcCCCEEEECCcCccHHHhhcCCccc----cccCCCCCc---hhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 479999998752 22222222110 001235544 33456677888888888884322333334543
Q ss_pred ----h-hh---HHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHH
Q psy17999 72 ----Q-VS---FDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 72 ----~-~s---vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av 126 (335)
. +. +..|++.|++++-|..+. ...++++.+.+ .+.|||..-| - |.++.++++
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~~~~~~~~ik~~~~iPvi~~Gg-i-t~e~a~~~l 297 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRERE-ADDSIGPLIKEAFGGPYIVNER-F-DKASANAAL 297 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECCC-CTTCCHHHHHHHHCSCEEEESS-C-CHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECCCC-CCHHHHHHHHHHCCCCEEEeCC-C-CHHHHHHHH
Confidence 1 12 456778899999998876 33366666665 3789888754 4 776665543
No 293
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=77.63 E-value=5.4 Score=36.67 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHcCCce--EeccCC-hhhHHHHHhCCCCEE-EEcC----CCCCC-----HHHHHHHHh-cCCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVDIMF--TASAMD-QVSFDFLLSANVPFI-KIGS----GDSNN-----IPLIKYAAS-KQKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f--~stpfd-~~svd~l~~l~v~~~-KIaS----~d~~n-----~~LL~~~a~-~gkPvil 111 (335)
||.|+..++.+.|+++||.. +++|-+ .+-+..+.+..-.|+ -+.+ +.-+. ..+++++.+ ++.||++
T Consensus 125 LP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 125 LSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 78889999999999999754 566644 677787877765664 3432 12222 236666655 4789999
Q ss_pred eCCCCCCHHHHHHHHH
Q psy17999 112 STGMLPSIEHVDNIYT 127 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~ 127 (335)
..|.+ +.+++..+.+
T Consensus 205 GfGIs-t~e~a~~~~~ 219 (252)
T 3tha_A 205 GFGIQ-NNQDVKRMRK 219 (252)
T ss_dssp ESSCC-SHHHHHHHTT
T ss_pred EcCcC-CHHHHHHHHh
Confidence 99999 9999987654
No 294
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=77.62 E-value=30 Score=40.71 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHHcC---CceEec-----cCC----hhhHHHHHhCCCCE--EEEcCCCCCCHHHHHHHHhcCCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVD---IMFTAS-----AMD----QVSFDFLLSANVPF--IKIGSGDSNNIPLIKYAASKQKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~G---i~f~st-----pfd----~~svd~l~~l~v~~--~KIaS~d~~n~~LL~~~a~~gkPvil 111 (335)
++.+++.+-.+.+++.. -.|... |.. .+.++.+.+.|+++ +-++.+....-.+++.+.+.|.++|.
T Consensus 618 ~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~ 697 (2060)
T 2uva_G 618 YNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHIS 697 (2060)
T ss_dssp CSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEE
Confidence 57777766666665532 333332 221 24567888899999 99988876555677888888999986
Q ss_pred eCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCC
Q psy17999 112 STGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDI 190 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~ 190 (335)
..+ +..+-..++..+.. |-. .-|++=..|.-+++|.. + ......-+..++.+++.+ ++
T Consensus 698 ~v~---~~~~a~~~v~~l~~aG~D-~iV~~q~~G~eaGGH~g---------------~-~d~~~~~l~lv~~i~~~~-~i 756 (2060)
T 2uva_G 698 FKP---GSVDAIQQVINIAKANPT-FPIILQWTGGRGGGHHS---------------F-EDFHQPILLMYSRIRKCS-NI 756 (2060)
T ss_dssp ECC---CSHHHHHHHHHHHHHCTT-SCEEEEECCTTSSSSCC---------------S-CCSHHHHHHHHHHHHTST-TE
T ss_pred ecC---CHHHHHHHHHHHHHcCCC-EEEEeeeEcccCCCCCC---------------c-ccccchHHHHHHHHHHHc-CC
Confidence 655 33454555444444 533 11111133333333211 0 000112256778888887 89
Q ss_pred CeecCCCCCChHHHHHHH-----------HcCCc
Q psy17999 191 PIGYSGHENGVHVCYAAV-----------AMGAQ 213 (335)
Q Consensus 191 pVG~SdHt~g~~~~~aAv-----------alGA~ 213 (335)
||.-.+--....-..+|. +|||+
T Consensus 757 pviaaGGI~~g~~i~aaltg~ws~~~g~palGAd 790 (2060)
T 2uva_G 757 VLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFD 790 (2060)
T ss_dssp EEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCS
T ss_pred CEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCC
Confidence 987666555566677888 89998
No 295
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=77.59 E-value=13 Score=35.70 Aligned_cols=129 Identities=15% Similarity=0.118 Sum_probs=68.6
Q ss_pred CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc
Q psy17999 94 NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY 172 (335)
Q Consensus 94 ~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~ 172 (335)
..+..|+++.+ +++||+++ |.. +.++...+.+ .|- +.+.++....-....
T Consensus 216 ~~~~~i~~lr~~~~~PvivK-~v~-~~e~a~~a~~---~Ga------------------------d~I~vs~~ggr~~~~ 266 (368)
T 2nli_A 216 ISPRDIEEIAGHSGLPVFVK-GIQ-HPEDADMAIK---RGA------------------------SGIWVSNHGARQLYE 266 (368)
T ss_dssp CCHHHHHHHHHHSSSCEEEE-EEC-SHHHHHHHHH---TTC------------------------SEEEECCGGGTSCSS
T ss_pred hhHHHHHHHHHHcCCCEEEE-cCC-CHHHHHHHHH---cCC------------------------CEEEEcCCCcCCCCC
Confidence 35777888877 68999998 334 7777665543 242 333331111101111
Q ss_pred cCCCchHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 173 HDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 173 ~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
....+..+..+++..+ ++||.-++--....-...|+++||+.+- +-|-......|.+ . --+.+..+.+.++..
T Consensus 267 g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~---g-v~~~l~~l~~el~~~ 342 (368)
T 2nli_A 267 APGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQ---G-AYSVLDYFQKDLTRV 342 (368)
T ss_dssp CCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChH---H-HHHHHHHHHHHHHHH
Confidence 2345677888887654 5888655444444445567889998443 2111000000100 0 013455666677777
Q ss_pred HHHhCC
Q psy17999 250 EQSLGS 255 (335)
Q Consensus 250 ~~alG~ 255 (335)
-..+|.
T Consensus 343 m~~~G~ 348 (368)
T 2nli_A 343 MQLTGS 348 (368)
T ss_dssp HHHHTC
T ss_pred HHHhCC
Confidence 777775
No 296
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=77.48 E-value=6.8 Score=34.80 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=29.7
Q ss_pred CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 92 DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 92 d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.-.|+++++++.+ .+.|||++-|.. ++++++.+++
T Consensus 64 ~~~~~~~i~~i~~~~~ipvi~~Ggi~-~~~~~~~~l~ 99 (247)
T 3tdn_A 64 SGYDTEMIRFVRPLTTLPIIASGGAG-KMEHFLEAFL 99 (247)
T ss_dssp SCCCHHHHHHHGGGCCSCEEEESCCC-SHHHHHHHHH
T ss_pred CcccHHHHHHHHHhCCCCEEEeCCCC-CHHHHHHHHH
Confidence 3468999999987 589999999999 9999888754
No 297
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=77.41 E-value=7.7 Score=35.41 Aligned_cols=87 Identities=10% Similarity=0.124 Sum_probs=58.5
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCC----c---cCCCc
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTP----Y---HDINL 177 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~----~---~~~nL 177 (335)
+.|++++.+.. +.+++.++++.+.. ... +.+-+|+.+....+ + ...-+
T Consensus 98 ~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~-----------------------d~iei~~~~p~~~~g~~~~g~~~~~~~ 153 (311)
T 1ep3_A 98 ELPIIANVAGS-EEADYVAVCAKIGDAANV-----------------------KAIELNISCPNVKHGGQAFGTDPEVAA 153 (311)
T ss_dssp TSCEEEEECCS-SHHHHHHHHHHHTTSTTE-----------------------EEEEEECCSEEGGGTTEEGGGCHHHHH
T ss_pred CCcEEEEEcCC-CHHHHHHHHHHHhccCCC-----------------------CEEEEeCCCCCCCCchhhhcCCHHHHH
Confidence 89999999998 99999999988874 222 55566754321100 0 01115
Q ss_pred hHHHHHHHHCCCCCeec---CCCCCChHHHHHHHHcCCcEEEe
Q psy17999 178 NVIHTLRSRYPDIPIGY---SGHENGVHVCYAAVAMGAQIIEK 217 (335)
Q Consensus 178 ~~i~~L~~~fp~~pVG~---SdHt~g~~~~~aAvalGA~vIEk 217 (335)
..+..+++.. ++||+. ++.+.-...+..+...|++.|--
T Consensus 154 eii~~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 154 ALVKACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhc-CCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 6777888887 788863 34444466678889999996654
No 298
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=77.40 E-value=37 Score=29.90 Aligned_cols=84 Identities=10% Similarity=0.006 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHcCCceEeccC----Ch----hhHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEeCC-CCC-
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM----DQ----VSFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIISTG-MLP- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf----d~----~svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilStG-~~~- 117 (335)
+-..-+.+.|++.|+.+..... |. +.++.+.+.++|.+-|.+.+... .+.++++.+.|.||++--. ...
T Consensus 20 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~ 99 (297)
T 3rot_A 20 SLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDK 99 (297)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCT
T ss_pred HHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCccc
Confidence 3456778899999998876543 22 23566666789999987776543 6788999999999887432 210
Q ss_pred ------------CHHHHHHHHHHHHh-c
Q psy17999 118 ------------SIEHVDNIYTTVKQ-Y 132 (335)
Q Consensus 118 ------------tl~Ei~~Av~~i~~-g 132 (335)
..+-...|++++.+ |
T Consensus 100 ~~~~~~~~V~~D~~~~g~~a~~~l~~~g 127 (297)
T 3rot_A 100 TKNPYLVFLGSDNLLAGKKLGEKALELT 127 (297)
T ss_dssp TTSCCSCEEECCHHHHHHHHHHHHHHHC
T ss_pred cccCcceEEccChHHHHHHHHHHHHHhc
Confidence 12334567777776 5
No 299
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=77.04 E-value=13 Score=35.84 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=70.2
Q ss_pred CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEe--eecCCCCC
Q psy17999 94 NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSIL--HCVSAYPT 170 (335)
Q Consensus 94 ~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ll--HC~s~YP~ 170 (335)
.++..++++.+ +++||+++ |.. +.++...+.+ .|-. .+.+ |.-..+..
T Consensus 212 ~~~~~i~~i~~~~~~Pv~vk-gv~-t~e~a~~a~~---aGad------------------------~I~vs~~gg~~~d~ 262 (380)
T 1p4c_A 212 FNWEALRWLRDLWPHKLLVK-GLL-SAEDADRCIA---EGAD------------------------GVILSNHGGRQLDC 262 (380)
T ss_dssp CCHHHHHHHHHHCCSEEEEE-EEC-CHHHHHHHHH---TTCS------------------------EEEECCGGGTSCTT
T ss_pred ccHHHHHHHHHhcCCCEEEE-ecC-cHHHHHHHHH---cCCC------------------------EEEEcCCCCCcCCC
Confidence 36889998776 58999998 656 8888776654 2432 2222 32111111
Q ss_pred CccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 171 PYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 171 ~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
...++..+..+++.. +.||.-++=-....-...+.++||+ .|=+-+.......|.+ . --+.++.+++.++.
T Consensus 263 --~~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~---~-v~~~~~~l~~el~~ 335 (380)
T 1p4c_A 263 --AISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET---G-VDEVLTLLKADIDR 335 (380)
T ss_dssp --CCCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHH---H-HHHHHHHHHHHHHH
T ss_pred --CcCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHH---H-HHHHHHHHHHHHHH
Confidence 124688889999888 5688655443334444457789998 3322221100000100 0 01245556667777
Q ss_pred HHHHhCC
Q psy17999 249 IEQSLGS 255 (335)
Q Consensus 249 ~~~alG~ 255 (335)
.-..+|.
T Consensus 336 ~m~~~G~ 342 (380)
T 1p4c_A 336 TLAQIGC 342 (380)
T ss_dssp HHHHHTC
T ss_pred HHHHhCC
Confidence 7777775
No 300
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=76.85 E-value=16 Score=33.81 Aligned_cols=150 Identities=16% Similarity=0.204 Sum_probs=82.3
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCC--CCHHHHHHHHhcCC-cEEEeCCCCCCHH
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDS--NNIPLIKYAASKQK-PLIISTGMLPSIE 120 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~--~n~~LL~~~a~~gk-PvilStG~~~tl~ 120 (335)
..|+.++-.++.+.-.+.|+..+ -+++.-. ..+..++++++..+ +-+..-..+ ..+
T Consensus 22 ~~~~~~~K~~i~~~L~~~Gv~~I--------------------E~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~~-~~~ 80 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVI--------------------EAGFPISSPGDFECVKAIAKAIKHCSVTGLARC-VEG 80 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEE--------------------EEECGGGCHHHHHHHHHHHHHCCSSEEEEEEES-SHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEE--------------------EEeCCCCCccHHHHHHHHHHhcCCCEEEEEecC-CHH
Confidence 45888888877776666665544 3333222 13455666665432 233222234 678
Q ss_pred HHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCC------CCCc-cCCC-c-hHHHHHHHHCCCC
Q psy17999 121 HVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAY------PTPY-HDIN-L-NVIHTLRSRYPDI 190 (335)
Q Consensus 121 Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~Y------P~~~-~~~n-L-~~i~~L~~~fp~~ 190 (335)
+++.|++.+.. +.. .+.+.-.+|.. -... +.++ + ..+...++ . +.
T Consensus 81 di~~a~~~~~~ag~~-----------------------~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~-~-g~ 135 (293)
T 3ewb_X 81 DIDRAEEALKDAVSP-----------------------QIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQ-K-FD 135 (293)
T ss_dssp HHHHHHHHHTTCSSE-----------------------EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHT-T-CS
T ss_pred HHHHHHHHHhhcCCC-----------------------EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHh-C-CC
Confidence 89999887764 322 33333333311 1111 0000 1 22233333 4 56
Q ss_pred CeecC--C---CCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 191 PIGYS--G---HENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 191 pVG~S--d---Ht~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
.|-|+ | ++.. ..++.++..+||+.|= + .|-.-.++|.++.++++.+++.
T Consensus 136 ~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~----l------~DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 136 VVQFSPEDATRSDRAFLIEAVQTAIDAGATVIN----I------PDTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp CEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEE----E------ECSSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEE----e------cCCCCCCCHHHHHHHHHHHHHh
Confidence 66442 2 3333 3456778899998654 2 2666779999999999988764
No 301
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=76.32 E-value=18 Score=34.21 Aligned_cols=112 Identities=10% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCC-ceEeccCCh----------------hhHHHHHhC--------------CCCEEEEcCCC--CCCHH
Q psy17999 51 YVMLQQCADQVDI-MFTASAMDQ----------------VSFDFLLSA--------------NVPFIKIGSGD--SNNIP 97 (335)
Q Consensus 51 ~~~L~~~~~~~Gi-~f~stpfd~----------------~svd~l~~l--------------~v~~~KIaS~d--~~n~~ 97 (335)
+..|.+.+++.|+ .+.++-+.+ .+++.|.++ .+-+++||... .+...
T Consensus 92 ~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q 171 (339)
T 3gtx_A 92 PAFLREVSEATGLQILCATGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYE 171 (339)
T ss_dssp HHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHH
T ss_pred HHHHHHHHHHcCCcEEEEcCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHH
Q ss_pred H------HHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeec-CCCC
Q psy17999 98 L------IKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCV-SAYP 169 (335)
Q Consensus 98 L------L~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~-s~YP 169 (335)
. ++...++|+||++=+|.. .... +.++.+++ +.+.. .+++.||. +.
T Consensus 172 ~~~f~aq~~lA~~~glPViiH~~~g-r~a~--~~~~iL~~~~~~~~---------------------~~vi~H~~~~~-- 225 (339)
T 3gtx_A 172 QLFFRAAARVQRETGVPIITHTQEG-QQGP--QQAELLTSLGADPA---------------------RIMIGHMDGNT-- 225 (339)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECSTT-CCHH--HHHHHHHHTTCCGG---------------------GEEECCGGGCC--
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCC-cCHH--HHHHHHHHcCCCcc---------------------cEEEEccCCCC--
Q ss_pred CCccCCCchHHHHHHHHCCCCCeecCC
Q psy17999 170 TPYHDINLNVIHTLRSRYPDIPIGYSG 196 (335)
Q Consensus 170 ~~~~~~nL~~i~~L~~~fp~~pVG~Sd 196 (335)
++.....+-++ +.-|||++
T Consensus 226 ------~~e~a~~~l~~--G~~i~~~g 244 (339)
T 3gtx_A 226 ------DPAYHRETLRH--GVSIAFDR 244 (339)
T ss_dssp ------CHHHHHHHHTT--TCEEEECC
T ss_pred ------CHHHHHHHHHc--CcEEEEcc
No 302
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=76.30 E-value=17 Score=27.67 Aligned_cols=78 Identities=10% Similarity=0.089 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCC-CCEEEEcC--CCCCCHHHHHHHHhc---CCcEEEeCCCCCCHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSAN-VPFIKIGS--GDSNNIPLIKYAASK---QKPLIISTGMLPSIEH 121 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~-v~~~KIaS--~d~~n~~LL~~~a~~---gkPvilStG~~~tl~E 121 (335)
......|.+..++.|..+....-..+.+..+.+.. +|++-+.- .+.+-+.+++++.+. ..|||+-|+.. +.+.
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~-~~~~ 95 (136)
T 3hdv_A 17 AVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDT-DVEE 95 (136)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSC-CHHH
T ss_pred HHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCC-ChHH
Confidence 34456677777788998887666666677777665 67666543 366778999998865 47999999988 7777
Q ss_pred HHHHH
Q psy17999 122 VDNIY 126 (335)
Q Consensus 122 i~~Av 126 (335)
+..++
T Consensus 96 ~~~~~ 100 (136)
T 3hdv_A 96 AVDVM 100 (136)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 303
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=76.30 E-value=11 Score=36.19 Aligned_cols=73 Identities=10% Similarity=0.028 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCC----HHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNN----IPLIKYAASKQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n----~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
....++++++|+..+++.- .|.+ ++|+.-|+..+..+ .++.+++.+.||+|++...+ +.+|.++.++
T Consensus 43 ~~a~~~a~~~gv~~~~~~~------~l~~-~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl--~~~ea~~l~~ 113 (372)
T 4gmf_A 43 ARSRELAHAFGIPLYTSPE------QITG-MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPL--HPDDISSLQT 113 (372)
T ss_dssp HHHHHHHHHTTCCEESSGG------GCCS-CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCC--CHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEECCHH------HHhc-CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCC--CHHHHHHHHH
Confidence 4566789999998765432 2222 48999999998888 89999999999999999996 6889888888
Q ss_pred HHHhcC
Q psy17999 128 TVKQYH 133 (335)
Q Consensus 128 ~i~~g~ 133 (335)
.-++.+
T Consensus 114 ~A~~~g 119 (372)
T 4gmf_A 114 LAQEQG 119 (372)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 766643
No 304
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=76.25 E-value=20 Score=26.77 Aligned_cols=78 Identities=10% Similarity=0.114 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~ 124 (335)
.....|....++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++.+. ..|||+-|+.. +.+.+..
T Consensus 14 ~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~ 92 (124)
T 1srr_A 14 GIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG-ELDMIQE 92 (124)
T ss_dssp HHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC-CHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC-chHHHHH
Confidence 344556666677788876544445667777776678776643 456678899998764 67999999988 7777666
Q ss_pred HHH
Q psy17999 125 IYT 127 (335)
Q Consensus 125 Av~ 127 (335)
+.+
T Consensus 93 ~~~ 95 (124)
T 1srr_A 93 SKE 95 (124)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 305
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=76.22 E-value=8.1 Score=37.14 Aligned_cols=116 Identities=10% Similarity=0.064 Sum_probs=67.1
Q ss_pred CCCCcEEEeeccc---ccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQKSC---LSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
++|.|.|...--. .+.+++...- .....||.+ +.++..|..|-.+.+++.+...-|.+=.++++
T Consensus 172 ~aGfDgVEih~a~GYLl~QFLsp~~N----~RtD~yGGs---lenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 172 AAGFDGVEVHGANGYLLDQFLQDSAN----RRTDAYGGS---IENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HTTCSEEEEECCTTSHHHHHHSTTTC----CCCSTTSSS---HHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HcCCCEEEECCcCccHHHhccCcccc----cccCCCCCC---hhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 4799999977521 2222222110 001235544 33456677888888888874322333334542
Q ss_pred ----h-hh---HHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHH
Q psy17999 72 ----Q-VS---FDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 72 ----~-~s---vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av 126 (335)
. +. +..|++.|++++-|..+. ...++++.+.+ .+.|||..-| - |.++.++++
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~~~~~~~~ik~~~~iPvi~~Gg-i-t~e~a~~~l 305 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARESF-GGDAIGQQLKAAFGGPFIVNEN-F-TLDSAQAAL 305 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC-STTCCHHHHHHHHCSCEEEESS-C-CHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEeCC-C-CHHHHHHHH
Confidence 1 12 456778899999998876 23366666665 4789887644 4 776655543
No 306
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=76.10 E-value=9 Score=33.63 Aligned_cols=78 Identities=8% Similarity=0.092 Sum_probs=58.4
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHh-c-CCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAAS-K-QKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~-~-gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
..+.+.|++.|+.++..+.+.+.+....+.|+|++|+-..... -+.+|+++.. . +.|++ -+|+= +. +++.++
T Consensus 94 ~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~~ipvv-aiGGI-~~---~n~~~~ 168 (207)
T 2yw3_A 94 EEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFL-PTGGI-KE---EHLPHY 168 (207)
T ss_dssp HHHHHHHHHHTCCEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEE-EBSSC-CG---GGHHHH
T ss_pred HHHHHHHHHhCCCEEecCCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHHhhCCCCcEE-EeCCC-CH---HHHHHH
Confidence 5788899999999998899999888888999999999665544 5688888776 3 68887 45544 44 355556
Q ss_pred HHhcCC
Q psy17999 129 VKQYHS 134 (335)
Q Consensus 129 i~~g~~ 134 (335)
+..|..
T Consensus 169 l~aGa~ 174 (207)
T 2yw3_A 169 AALPNL 174 (207)
T ss_dssp HTCSSB
T ss_pred HhCCCc
Confidence 655544
No 307
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=76.06 E-value=48 Score=30.42 Aligned_cols=134 Identities=16% Similarity=0.243 Sum_probs=0.0
Q ss_pred HhhcCCHHHHHHHHHHHHH--cC-CceEeccCC------hhhHHHHHhCCCCEEEEcCCCC---CCHHHHHHHHh----c
Q psy17999 42 QHLEFSQEEYVMLQQCADQ--VD-IMFTASAMD------QVSFDFLLSANVPFIKIGSGDS---NNIPLIKYAAS----K 105 (335)
Q Consensus 42 ~~~el~~e~~~~L~~~~~~--~G-i~f~stpfd------~~svd~l~~l~v~~~KIaS~d~---~n~~LL~~~a~----~ 105 (335)
+...|+.++..++.+.+.+ .| +++++-+-+ .+....++++|+|.+-+...-. +.-.++++... +
T Consensus 50 E~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 129 (293)
T 1f6k_A 50 ENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET 129 (293)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Q ss_pred CCcEEE-----eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHH
Q psy17999 106 QKPLII-----STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVI 180 (335)
Q Consensus 106 gkPvil-----StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i 180 (335)
+.||+| -||..++.+.+.+.++ .+ +++-+--.| -|+..+
T Consensus 130 ~lPiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nIvgiK~s~--------gd~~~~ 173 (293)
T 1f6k_A 130 GSNMIVYSIPFLTGVNMGIEQFGELYK-----NP-----------------------KVLGVKFTA--------GDFYLL 173 (293)
T ss_dssp CCCEEEEECHHHHCCCCCHHHHHHHHT-----ST-----------------------TEEEEEECS--------CCHHHH
T ss_pred CCCEEEEECccccCcCCCHHHHHHHhc-----CC-----------------------CEEEEEECC--------CCHHHH
Q ss_pred HHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EE
Q psy17999 181 HTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-II 215 (335)
Q Consensus 181 ~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vI 215 (335)
..+++..|+..| ||++.. ....+.++||+ +|
T Consensus 174 ~~~~~~~~~f~v-~~G~d~---~~~~~l~~G~~G~i 205 (293)
T 1f6k_A 174 ERLKKAYPNHLI-WAGFDE---MMLPAASLGVDGAI 205 (293)
T ss_dssp HHHHHHCTTSEE-EECCGG---GHHHHHHTTCSEEE
T ss_pred HHHHHhCCCeEE-EECcHH---HHHHHHHCCCcEEE
No 308
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=75.97 E-value=8.7 Score=35.03 Aligned_cols=54 Identities=13% Similarity=0.084 Sum_probs=42.4
Q ss_pred hhHHHHHhCCCCEEEEcCCCC------CCHHHHHHHHh-c----CCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSGDS------NNIPLIKYAAS-K----QKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~d~------~n~~LL~~~a~-~----gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
+.+..++++ ++.+-+-+.+- .|+++++++++ . +.|||.|-|.+ +++++.++.+.
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~-s~ed~~~l~~~ 226 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAK-SVDDLKLVDEL 226 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEESCCC-CTHHHHHHHHH
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCC-CHHHHHHHHHh
Confidence 445666778 88888855432 69999999987 4 89999999999 99999988764
No 309
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=75.93 E-value=15 Score=27.85 Aligned_cols=43 Identities=23% Similarity=0.384 Sum_probs=32.6
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEecc
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHF 219 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~ 219 (335)
.+..+..+++.+|+.|| .++++.. ......|...||. +|.|-+
T Consensus 66 g~~~~~~l~~~~~~~~ii~~t~~~~-~~~~~~~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 66 GLKLLEHIRNRGDQTPVLVISATEN-MADIAKALRLGVEDVLLKPV 110 (130)
T ss_dssp CHHHHHHHHHTTCCCCEEEEECCCC-HHHHHHHHHHCCSEEEESCC
T ss_pred HHHHHHHHHhcCCCCCEEEEEcCCC-HHHHHHHHHcCCCEEEeCCC
Confidence 47778899998888998 5677654 4455568899998 888754
No 310
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=75.87 E-value=24 Score=27.05 Aligned_cols=79 Identities=5% Similarity=0.019 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHH--hCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLL--SANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEH 121 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~--~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~E 121 (335)
......|.++.++.|..+.+..-..+.++.+. +..+|++-+.. .+.+-+.+++.+.+. ..|||+-|+.. +.+.
T Consensus 13 ~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~ 91 (143)
T 3jte_A 13 STILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG-DLDN 91 (143)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT-CHHH
T ss_pred HHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC-CHHH
Confidence 34456677777788987776666666777777 45678776654 356778899988775 57999999988 7777
Q ss_pred HHHHHH
Q psy17999 122 VDNIYT 127 (335)
Q Consensus 122 i~~Av~ 127 (335)
+..+++
T Consensus 92 ~~~~~~ 97 (143)
T 3jte_A 92 AILAMK 97 (143)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
No 311
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=75.87 E-value=10 Score=36.22 Aligned_cols=89 Identities=8% Similarity=0.065 Sum_probs=53.3
Q ss_pred HHhhcCCHHHHHHHHHHHHHcCCceEeccCC-----------hhh----HHHHHhCCCCEEEEcCCC-----CCCHHHHH
Q psy17999 41 KQHLEFSQEEYVMLQQCADQVDIMFTASAMD-----------QVS----FDFLLSANVPFIKIGSGD-----SNNIPLIK 100 (335)
Q Consensus 41 ~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd-----------~~s----vd~l~~l~v~~~KIaS~d-----~~n~~LL~ 100 (335)
.++..|..|-.+.+++.+...-|.+=.++++ .+. +..|++.|++++-+..+. -.++++++
T Consensus 208 enr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~ 287 (364)
T 1vyr_A 208 ENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQ 287 (364)
T ss_dssp HHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHH
T ss_pred hcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHH
Confidence 3455666677777776663211222123331 112 567778999999998752 23678888
Q ss_pred HHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Q psy17999 101 YAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 101 ~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
.+.+ .+.|||..-|. |.++.++ .+..|..
T Consensus 288 ~v~~~~~iPvi~~Ggi--t~~~a~~---~l~~g~a 317 (364)
T 1vyr_A 288 KVRERFHGVIIGAGAY--TAEKAED---LIGKGLI 317 (364)
T ss_dssp HHHHHCCSEEEEESSC--CHHHHHH---HHHTTSC
T ss_pred HHHHHCCCCEEEECCc--CHHHHHH---HHHCCCc
Confidence 7775 47898877554 6665554 4555433
No 312
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=75.84 E-value=57 Score=31.21 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=28.5
Q ss_pred CchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 176 NLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
++..+..+|+.+ ++||.-.+-- ....+..++.-| |++|-
T Consensus 287 ~~~~~~~ik~~~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 287 PEGFREQMRQRF-KGGLIYCGNY-DAGRAQARLDDNTADAVA 326 (377)
T ss_dssp CTTHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred hHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCceEEe
Confidence 677889999999 8998544333 266777788888 77655
No 313
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=75.79 E-value=29 Score=30.70 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccC--------------------C-----------hhhHHHHHhCCCCEEEEcCCCCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAM--------------------D-----------QVSFDFLLSANVPFIKIGSGDSN 94 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpf--------------------d-----------~~svd~l~~l~v~~~KIaS~d~~ 94 (335)
++.+...++++.++++||.+.+... | .+.++++.++|++.+.+.++...
T Consensus 48 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~ 127 (290)
T 3tva_A 48 RTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVP 127 (290)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCc
Confidence 6788999999999999999877521 1 23467778899999999765332
Q ss_pred C---------H----HHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 95 N---------I----PLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 95 n---------~----~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
. . .+.+.+.+.|..+.+-+... +.+++...++.+.
T Consensus 128 ~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~-~~~~~~~l~~~~~ 175 (290)
T 3tva_A 128 ESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE-SADHLLEFIEDVN 175 (290)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSS-CHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC-CHHHHHHHHHhcC
Confidence 1 1 22233445689999999887 8888887776653
No 314
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=75.75 E-value=9.2 Score=33.23 Aligned_cols=53 Identities=23% Similarity=0.164 Sum_probs=41.2
Q ss_pred hhHHHHHhCCCCEEEEcCCCC------CCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSGDS------NNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~d~------~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av 126 (335)
+.+..+.++|++++.+.+.+. .++.+++++.+. +.||+.+-|.+ +.+++.++.
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia~GGi~-~~~~~~~~~ 217 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGGAG-RVEHFYEAA 217 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCC-SHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEEeCCCC-CHHHHHHHH
Confidence 335667788999999865442 378889888764 78999999999 888888765
No 315
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=75.73 E-value=22 Score=31.33 Aligned_cols=85 Identities=11% Similarity=0.046 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML------ 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~------ 116 (335)
+-+..+.+.+++.|..++... .|.+ .++.+.+.++|.+-+.+.+. +.+.++++.+.+.|+++--...
T Consensus 33 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~l~~~~iPvV~~~~~~~~~~~~ 111 (289)
T 2fep_A 33 ELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNI-TDEHVAEFKRSPVPIVLAASVEEQEETP 111 (289)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCC-CHHHHHHHHHSSSCEEEESCCCTTCCSC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCC-CHHHHHHHHhcCCCEEEEccccCCCCCC
Confidence 346677888999998766543 3332 24556667899998877665 4678888888899987642211
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |..
T Consensus 112 ~V~~D~~~~g~~a~~~L~~~G~~ 134 (289)
T 2fep_A 112 SVAIDYEQAIYDAVKLLVDKGHT 134 (289)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCS
T ss_pred EEEECcHHHHHHHHHHHHHCCCC
Confidence 0 12345567777766 544
No 316
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=75.58 E-value=6.3 Score=36.36 Aligned_cols=81 Identities=14% Similarity=0.185 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHHcCCc--eEeccCC-hhhHHHHHhCCCCEEEE-cCCC---CC------CHHHHHHHHh-cCCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVDIM--FTASAMD-QVSFDFLLSANVPFIKI-GSGD---SN------NIPLIKYAAS-KQKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~--f~stpfd-~~svd~l~~l~v~~~KI-aS~d---~~------n~~LL~~~a~-~gkPvil 111 (335)
|+.++..++.++|+++|+. ++.+|-+ .+-+..+.+..-.|+=. .... .. -..+++++.+ ++.||++
T Consensus 132 lp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 132 VPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp SCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE
T ss_pred CCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 7788899999999999986 4566644 46677777665555444 2211 11 1356666665 4789999
Q ss_pred eCCCCCCHHHHHHHHH
Q psy17999 112 STGMLPSIEHVDNIYT 127 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~ 127 (335)
..|.+ |.+++..++.
T Consensus 212 GfGI~-~~e~~~~~~~ 226 (267)
T 3vnd_A 212 GFGIA-EPEQVRAAIK 226 (267)
T ss_dssp CSSCC-SHHHHHHHHH
T ss_pred ECCcC-CHHHHHHHHH
Confidence 99999 9999986654
No 317
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=75.38 E-value=14 Score=34.86 Aligned_cols=83 Identities=10% Similarity=0.106 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC---------CCC---CCHHHHHH---HHh-cCCcEEEe--
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS---------GDS---NNIPLIKY---AAS-KQKPLIIS-- 112 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS---------~d~---~n~~LL~~---~a~-~gkPvilS-- 112 (335)
-..|++.-++-+..++.++||.-++..+++.|++++-+++ .|. +--.++.. +++ ++.|||..
T Consensus 18 a~~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d 97 (305)
T 3ih1_A 18 ANRFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDID 97 (305)
T ss_dssp HHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECT
T ss_pred HHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 4456666667788999999999999999999999999998 232 33334433 333 58999976
Q ss_pred CCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 113 TGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 113 tG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+|-+ +.+++.+.+..+.+ |-.
T Consensus 98 ~Gyg-~~~~v~~~v~~l~~aGaa 119 (305)
T 3ih1_A 98 TGFG-GVLNVARTAVEMVEAKVA 119 (305)
T ss_dssp TCSS-SHHHHHHHHHHHHHTTCS
T ss_pred CCCC-CHHHHHHHHHHHHHhCCc
Confidence 7766 88888888888776 543
No 318
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=75.37 E-value=18 Score=27.23 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~A 125 (335)
.....|....++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++.+. +.|||+-|+.. +.+....+
T Consensus 13 ~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~-~~~~~~~~ 91 (120)
T 3f6p_A 13 PIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD-SEIDKVIG 91 (120)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS-CHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC-ChHHHHHH
Confidence 344556677778898877655555667788877788776643 355667888888653 67999999988 77666655
Q ss_pred H
Q psy17999 126 Y 126 (335)
Q Consensus 126 v 126 (335)
.
T Consensus 92 ~ 92 (120)
T 3f6p_A 92 L 92 (120)
T ss_dssp H
T ss_pred H
Confidence 3
No 319
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=75.37 E-value=8 Score=29.65 Aligned_cols=78 Identities=8% Similarity=-0.006 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC-------CCCCHHHHHHHHhc--CCcEEEeCCCCCC
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG-------DSNNIPLIKYAASK--QKPLIISTGMLPS 118 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~-------d~~n~~LL~~~a~~--gkPvilStG~~~t 118 (335)
......|.+..++.|..+....-..+.++.+.+..++++-+.-. +.+.+.+++++.+. ..|||+-|+.. +
T Consensus 13 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~ 91 (140)
T 2qr3_A 13 KGVLTAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA-D 91 (140)
T ss_dssp HHHHHHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG-G
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC-C
Confidence 34456677777788888775444456677887777787777543 66778899988875 68999999877 6
Q ss_pred HHHHHHHH
Q psy17999 119 IEHVDNIY 126 (335)
Q Consensus 119 l~Ei~~Av 126 (335)
.+.+..++
T Consensus 92 ~~~~~~~~ 99 (140)
T 2qr3_A 92 IDLAVRGI 99 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655554
No 320
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=75.34 E-value=11 Score=37.48 Aligned_cols=81 Identities=19% Similarity=0.264 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHc-C-CceE-eccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHHHHh----c-
Q psy17999 47 SQEEYVMLQQCADQV-D-IMFT-ASAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKYAAS----K- 105 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-G-i~f~-stpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~~a~----~- 105 (335)
+...+..+....+.. + +.++ -++.+.+++..+.++|+++++++.+- .-...+|..+++ .
T Consensus 267 ~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~ 346 (503)
T 1me8_A 267 SEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYF 346 (503)
T ss_dssp SHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHh
Confidence 333444443344443 4 6655 57899999999999999999995522 112234444432 2
Q ss_pred -----CCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 106 -----QKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 106 -----gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
+.|||.+-|.. +..++.+|+..
T Consensus 347 ~~~~~~ipvia~GGi~-~~~di~kAlal 373 (503)
T 1me8_A 347 EETGIYIPVCSDGGIV-YDYHMTLALAM 373 (503)
T ss_dssp HHHSEECCEEEESCCC-SHHHHHHHHHT
T ss_pred hhcCCCceEEEeCCCC-CHHHHHHHHHc
Confidence 79999999999 99999998753
No 321
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=75.34 E-value=10 Score=33.25 Aligned_cols=65 Identities=14% Similarity=0.009 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHcCCceEeccCC--h----hhHHHHHhCCCCEEEEcCCCCCCH-HHHHHHHhcCCcEEEeC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD--Q----VSFDFLLSANVPFIKIGSGDSNNI-PLIKYAASKQKPLIIST 113 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd--~----~svd~l~~l~v~~~KIaS~d~~n~-~LL~~~a~~gkPvilSt 113 (335)
+-+..+.+.|++.|+.++....+ . +.++.+.+.++|.+-+.+.+.... ++++++.+.+.||++--
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~ 96 (293)
T 3l6u_A 25 RLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAID 96 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEec
Confidence 44677888999999988765443 3 234555667899998877766553 88999999999988753
No 322
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=75.09 E-value=11 Score=34.73 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHcCCc--eEecc-CChhhHHHHHhCCCCEEEEcC-----CC-----CCCHHHHHHHHhc-CCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVDIM--FTASA-MDQVSFDFLLSANVPFIKIGS-----GD-----SNNIPLIKYAASK-QKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~--f~stp-fd~~svd~l~~l~v~~~KIaS-----~d-----~~n~~LL~~~a~~-gkPvil 111 (335)
++.++..++.+.++++|+. ++.+| -+.+.++.+.+....|+=+.| +. -....+|+++.+. +.||++
T Consensus 128 l~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 128 LPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp CCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTCCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 5668889999999999974 45555 345667777776656553322 11 1225788888774 789999
Q ss_pred eCCCCCCHHHHHHH
Q psy17999 112 STGMLPSIEHVDNI 125 (335)
Q Consensus 112 StG~~~tl~Ei~~A 125 (335)
..|-+ |.+++.++
T Consensus 208 GfGI~-t~e~a~~~ 220 (271)
T 1ujp_A 208 GFGVS-GKATAAQA 220 (271)
T ss_dssp ESCCC-SHHHHHHH
T ss_pred EcCCC-CHHHHHHh
Confidence 99999 99999885
No 323
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=75.07 E-value=44 Score=33.97 Aligned_cols=145 Identities=12% Similarity=0.036 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHc-CCceEeccCChhhHHHHHhC--CCCEEEEcCCCCCC--HHHHHHHHhcCCcEEEeC--C-CCCC
Q psy17999 47 SQEEYVMLQQCADQV-DIMFTASAMDQVSFDFLLSA--NVPFIKIGSGDSNN--IPLIKYAASKQKPLIIST--G-MLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~-Gi~f~stpfd~~svd~l~~l--~v~~~KIaS~d~~n--~~LL~~~a~~gkPvilSt--G-~~~t 118 (335)
..+++.++....++. ++++...-++.+.++...+. |.+++==-|+.- . ..+++-+++.|.|+|+.. | +.-|
T Consensus 368 ~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iINdis~~~-~~~~~~~~~~~~~g~~vV~m~~~~~~p~t 446 (566)
T 1q7z_A 368 DVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDE-EELEMKINLLKKYGGTLIVLLMGKDVPKS 446 (566)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEEEEEESCH-HHHHHHHHHHHHHCCEEEEESCSSSCCCS
T ss_pred HHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEEEECCcch-hhHHHHHHHHHHhCCeEEEEeCCCCCcCC
Confidence 356777777666554 99999999999999999888 888864444443 3 567788888999999965 3 3213
Q ss_pred ----HHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCc---hHHHHHHHHCCCC
Q psy17999 119 ----IEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINL---NVIHTLRSRYPDI 190 (335)
Q Consensus 119 ----l~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL---~~i~~L~~~fp~~ 190 (335)
++...+.++.+.+ |-+ +=|+-+-|+. |.....-|+ +.+..+++ + ++
T Consensus 447 ~~~~~~~l~~~~~~a~~~Gi~--~~IilDPg~~----------------------~igfgk~~~~~l~~~~~~~~-~-g~ 500 (566)
T 1q7z_A 447 FEERKEYFEKALKILERHDFS--DRVIFDPGVL----------------------PLGAEGKPVEVLKTIEFISS-K-GF 500 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCG--GGEEEECCCC----------------------CTTTTCCHHHHHHHHHHHHH-T-TC
T ss_pred HHHHHHHHHHHHHHHHHCCCC--CcEEEeCCCC----------------------cccCcHHHHHHHHHHHHHHh-C-CC
Confidence 4445555555554 321 1133333331 111111554 55555554 4 77
Q ss_pred Ce--ecCCCCCC--------hHHHHHHHHcCCcEEEec
Q psy17999 191 PI--GYSGHENG--------VHVCYAAVAMGAQIIEKH 218 (335)
Q Consensus 191 pV--G~SdHt~g--------~~~~~aAvalGA~vIEkH 218 (335)
|+ |.|==+.+ ...+..|+..|++++=-|
T Consensus 501 p~l~G~Snksf~~~~~~~l~~t~a~~a~~~G~~i~rvh 538 (566)
T 1q7z_A 501 NTTVGLSNLSFGLPDRSYYNTAFLVLGISKGLSSAIMN 538 (566)
T ss_dssp EECCBGGGGSTTSTTHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEeCcccccCCHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 77 66643332 122356788999987656
No 324
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=75.00 E-value=14 Score=28.45 Aligned_cols=79 Identities=9% Similarity=0.204 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC-CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS-GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS-~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~ 124 (335)
......|.+..++.|..+....-..+.++.+.+..+|++-+.- .+.+-+.+++.+.+. +.|||+-|+.. +.+.+..
T Consensus 14 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~-~~~~~~~ 92 (142)
T 2qxy_A 14 RITFLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYV-DKDLIIN 92 (142)
T ss_dssp HHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCC-CHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCC-CHHHHHH
Confidence 3455667777788898887554445667888777788887775 223345677777664 58999999988 7776666
Q ss_pred HHH
Q psy17999 125 IYT 127 (335)
Q Consensus 125 Av~ 127 (335)
+.+
T Consensus 93 ~~~ 95 (142)
T 2qxy_A 93 SVK 95 (142)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 325
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=74.98 E-value=7.1 Score=30.21 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHH-cCCceEeccCChhhHHHHHh-CCCCEEEEcCC---CCCCHHHHHHHHh----cCCcEEEeCCCCCC
Q psy17999 48 QEEYVMLQQCADQ-VDIMFTASAMDQVSFDFLLS-ANVPFIKIGSG---DSNNIPLIKYAAS----KQKPLIISTGMLPS 118 (335)
Q Consensus 48 ~e~~~~L~~~~~~-~Gi~f~stpfd~~svd~l~~-l~v~~~KIaS~---d~~n~~LL~~~a~----~gkPvilStG~~~t 118 (335)
......|.+..++ .|..+.+..-..+.++.+.+ ..+|++-+.-. +++-+.+++++.+ ...|||+-|+.. +
T Consensus 14 ~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~ 92 (140)
T 3lua_A 14 EYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSD-N 92 (140)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCC-C
T ss_pred HHHHHHHHHHHHhccCccEEEECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCC-C
Confidence 3445567777777 89988855545555677777 67888777643 4456788988877 378999999988 8
Q ss_pred HHHHHHHH
Q psy17999 119 IEHVDNIY 126 (335)
Q Consensus 119 l~Ei~~Av 126 (335)
.+.+..+.
T Consensus 93 ~~~~~~~~ 100 (140)
T 3lua_A 93 PGYRHAAL 100 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777664
No 326
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=74.94 E-value=18 Score=32.03 Aligned_cols=56 Identities=16% Similarity=0.299 Sum_probs=39.7
Q ss_pred CChhh----HHHHHhCCCCEEEEcCCCC---CCHHHHHHHHhc---CCcEEEeCCCCCCHHHHHHHH
Q psy17999 70 MDQVS----FDFLLSANVPFIKIGSGDS---NNIPLIKYAASK---QKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 70 fd~~s----vd~l~~l~v~~~KIaS~d~---~n~~LL~~~a~~---gkPvilStG~~~tl~Ei~~Av 126 (335)
++.+. ++.+.+.|+|++|+.++-- .++..++.+.+. ..||+.+-|-. |.++..+.+
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~-t~~da~~~l 194 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIR-DLETAISMI 194 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCC-SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCC-CHHHHHHHH
Confidence 56543 4666778999998876322 267777777654 68999999999 876665554
No 327
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=74.91 E-value=12 Score=33.05 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=42.9
Q ss_pred HHHHHhCCCCEEEEcCC------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHH
Q psy17999 75 FDFLLSANVPFIKIGSG------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTT 128 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~ 128 (335)
+..++++|++++-+.+. .-.|+.+++++.+ .+.|||.+-|.+ +.+++..+.+.
T Consensus 150 ~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~GGI~-~~~d~~~~~~~ 209 (241)
T 1qo2_A 150 LKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAAGGIS-SENSLKTAQKV 209 (241)
T ss_dssp HHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEESSCC-SHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHhc
Confidence 45678899998877552 2258999999887 489999999999 99999988664
No 328
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=74.86 E-value=21 Score=28.33 Aligned_cols=80 Identities=11% Similarity=0.050 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCC-hhhHHHHHhC--CCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMD-QVSFDFLLSA--NVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSI 119 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd-~~svd~l~~l--~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl 119 (335)
.......|.+..++.|+.++.+..+ .+.++.+.+. .+|++-+.- .+++-+.+++++.+. ..|||+-|+.. +.
T Consensus 45 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~-~~ 123 (157)
T 3hzh_A 45 SVFTVKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG-KE 123 (157)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC-CH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC-cH
Confidence 4566777888888899998744444 4556777776 678877764 366778999998775 57999999988 88
Q ss_pred HHHHHHHH
Q psy17999 120 EHVDNIYT 127 (335)
Q Consensus 120 ~Ei~~Av~ 127 (335)
+.+..+.+
T Consensus 124 ~~~~~~~~ 131 (157)
T 3hzh_A 124 QLVKDCLI 131 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
No 329
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=74.42 E-value=13 Score=32.46 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=59.2
Q ss_pred cCCHHHHHHHHHHHHHcCCceEecc--CC------hhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASA--MD------QVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML 116 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stp--fd------~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~ 116 (335)
.++.++..++++.+++.||.+.+.- ++ ...++++..+|++.+.+.++.-..-.+.+.+.+.|..+.+-+-..
T Consensus 59 ~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~~ 138 (262)
T 3p6l_A 59 NLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQ 138 (262)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCSS
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCCC
Confidence 4778899999999999999976542 21 335788889999999999875333445555556799998887643
Q ss_pred C----CHHHHHHHHH
Q psy17999 117 P----SIEHVDNIYT 127 (335)
Q Consensus 117 ~----tl~Ei~~Av~ 127 (335)
. +.+++.+.++
T Consensus 139 ~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 139 PSDYWKPENLLKAIS 153 (262)
T ss_dssp SSSSSSHHHHHHHHT
T ss_pred ccccCCHHHHHHHHH
Confidence 1 4555555443
No 330
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=74.39 E-value=11 Score=33.20 Aligned_cols=54 Identities=20% Similarity=0.128 Sum_probs=41.6
Q ss_pred hhHHHHHhCCCCEEEEcCCC------CCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSGD------SNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~d------~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+..++++|++.+-+.+.. -.|+.+++++.+ .+.|||.+-|.+ +.+++..+.+
T Consensus 156 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~-~~~d~~~~~~ 216 (252)
T 1ka9_F 156 EWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAG-RMEHFLEAFQ 216 (252)
T ss_dssp HHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCC-SHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCC-CHHHHHHHHH
Confidence 44567778899987775322 136999999887 489999999999 9999888653
No 331
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=74.35 E-value=11 Score=34.31 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHcCCce--Eecc-CChhhHHHHHhCCCCEEEEcCCC-----CCC------HHHHHHHHh-cCCcEE
Q psy17999 46 FSQEEYVMLQQCADQVDIMF--TASA-MDQVSFDFLLSANVPFIKIGSGD-----SNN------IPLIKYAAS-KQKPLI 110 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f--~stp-fd~~svd~l~~l~v~~~KIaS~d-----~~n------~~LL~~~a~-~gkPvi 110 (335)
++.++..++.+.|+++|+.+ +.+| -+.+.+..+.+....++-.-|.. -+. ..+++++.+ ++.||+
T Consensus 131 l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~ 210 (262)
T 2ekc_A 131 LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVV 210 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEE
Confidence 67789999999999999763 3455 44455666666555554332221 111 246666655 378999
Q ss_pred EeCCCCCCHHHHHH
Q psy17999 111 ISTGMLPSIEHVDN 124 (335)
Q Consensus 111 lStG~~~tl~Ei~~ 124 (335)
+..|.+ |.+.+..
T Consensus 211 vG~GI~-t~e~~~~ 223 (262)
T 2ekc_A 211 VGFGVS-KKEHARE 223 (262)
T ss_dssp EESSCC-SHHHHHH
T ss_pred EeCCCC-CHHHHHH
Confidence 999999 9998887
No 332
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=74.33 E-value=53 Score=30.13 Aligned_cols=151 Identities=17% Similarity=0.209 Sum_probs=96.5
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccC---ChhhH---HHHHhCCCCEEEEcCCC---CCCHHHHH---HHHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAM---DQVSF---DFLLSANVPFIKIGSGD---SNNIPLIK---YAAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpf---d~~sv---d~l~~l~v~~~KIaS~d---~~n~~LL~---~~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+- ..+++ ..++++|+|.+-+-..- .+.-.+++ ++|+ +++
T Consensus 50 ~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 50 PTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 469999999999887664 467776553 23333 35567899988776543 23344544 4554 599
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+|= ||..++.+.+.+.++ .+ +++-+--+ .-|+..+..
T Consensus 130 PiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nivgiK~s--------sgd~~~~~~ 173 (292)
T 3daq_A 130 PVVLYNVPSRTNMTIEPETVEILSQ-----HP-----------------------YIVALKDA--------TNDFEYLEE 173 (292)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHT-----ST-----------------------TEEEEEEC--------CCCHHHHHH
T ss_pred CEEEEecccccCCCCCHHHHHHHhc-----CC-----------------------CEEEEEeC--------CCCHHHHHH
Confidence 99995 788888888876543 12 33333222 236888888
Q ss_pred HHHHCCC--CCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYPD--IPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp~--~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+.+.+|+ .. .||++. .....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 174 ~~~~~~~~~f~-v~~G~d---~~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~ 224 (292)
T 3daq_A 174 VKKRIDTNSFA-LYSGND---DNVVEYYQRGGQGVIS-------------VIANVIPKEFQALYDAQQ 224 (292)
T ss_dssp HHTTSCTTTSE-EEESCG---GGHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHCCCCCEE-EEECCH---HHHHHHHhcCCCEEEe-------------CHHHhhHHHHHHHHHHHH
Confidence 8887764 33 366553 334567889997 442 223467888888877654
No 333
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=74.21 E-value=45 Score=31.15 Aligned_cols=178 Identities=15% Similarity=0.175 Sum_probs=80.6
Q ss_pred CCceEec---cCChhhHH-HHHhCCCCEEEEcCC------------CCC-CHHHHHHHHh-cCCcEEEeC-CCCCCHHHH
Q psy17999 62 DIMFTAS---AMDQVSFD-FLLSANVPFIKIGSG------------DSN-NIPLIKYAAS-KQKPLIIST-GMLPSIEHV 122 (335)
Q Consensus 62 Gi~f~st---pfd~~svd-~l~~l~v~~~KIaS~------------d~~-n~~LL~~~a~-~gkPvilSt-G~~~tl~Ei 122 (335)
+.+++.. -++.+.+. .++..+++++-|.-. ++. .+..++++.+ +++||+++. |...+.++.
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a 195 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASA 195 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHH
T ss_pred CceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHH
Confidence 4444444 24554443 344577888765422 121 2467777754 589999984 543377666
Q ss_pred HHHHHHHHhcCCCCceeecc-cCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCCh
Q psy17999 123 DNIYTTVKQYHSNLSILHCV-SAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGV 201 (335)
Q Consensus 123 ~~Av~~i~~g~~~~~~~~c~-~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~ 201 (335)
..+.+. |-. .+... .|-. ...+++... +. .-.. +-.......+..|..+++..+++||.-++--...
T Consensus 196 ~~a~~~---Gad---~I~v~~~ggt-~~~~~e~~r-~~---~~~~-~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~ 263 (349)
T 1p0k_A 196 GKLYEA---GAA---AVDIGGYGGT-NFSKIENLR-RQ---RQIS-FFNSWGISTAASLAEIRSEFPASTMIASGGLQDA 263 (349)
T ss_dssp HHHHHH---TCS---EEEEEC--------------------CCGG-GGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSH
T ss_pred HHHHHc---CCC---EEEEcCCCCc-chhhHHHhh-cc---cchh-hhhccCccHHHHHHHHHHhcCCCeEEEECCCCCH
Confidence 555432 432 11111 1110 000000000 00 0000 0000011234466777776667898544433334
Q ss_pred HHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q psy17999 202 HVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQSLGS 255 (335)
Q Consensus 202 ~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~alG~ 255 (335)
.-...++++||+.+- +-+.......|++ . -.+.+..+++.++..-..+|.
T Consensus 264 ~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~---~-~~~~~~~~~~~l~~~m~~~G~ 315 (349)
T 1p0k_A 264 LDVAKAIALGASCTGMAGHFLKALTDSGEE---G-LLEEIQLILEELKLIMTVLGA 315 (349)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEcHHHHHHHhhcCHH---H-HHHHHHHHHHHHHHHHHHhCC
Confidence 444567789998433 2211110000110 0 014566777777777777775
No 334
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.21 E-value=13 Score=33.72 Aligned_cols=81 Identities=19% Similarity=0.078 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHHHHcCCce--EeccC-ChhhHHHHHhCCCCEEEEcCCC----------CCCHHHHHHHHhc-CCcEEE
Q psy17999 46 FSQEEYVMLQQCADQVDIMF--TASAM-DQVSFDFLLSANVPFIKIGSGD----------SNNIPLIKYAASK-QKPLII 111 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f--~stpf-d~~svd~l~~l~v~~~KIaS~d----------~~n~~LL~~~a~~-gkPvil 111 (335)
++.++..++.+.++++|+.. +.+|- +.+.+..+.+....++-+-|.. -.-..+++.+.+. +.||++
T Consensus 131 ~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~v 210 (268)
T 1qop_A 131 VPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQ 210 (268)
T ss_dssp CCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEE
Confidence 55677889999999999753 44553 3455666666555555443311 1125778777764 789999
Q ss_pred eCCCCCCHHHHHHHHH
Q psy17999 112 STGMLPSIEHVDNIYT 127 (335)
Q Consensus 112 StG~~~tl~Ei~~Av~ 127 (335)
..|.+ |.+.+.+++.
T Consensus 211 ggGI~-t~e~~~~~~~ 225 (268)
T 1qop_A 211 GFGIS-SPEQVSAAVR 225 (268)
T ss_dssp ESSCC-SHHHHHHHHH
T ss_pred ECCCC-CHHHHHHHHH
Confidence 99999 9999988654
No 335
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=74.18 E-value=9.4 Score=35.54 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHcCCceEeccCC--hh----hHHHHHhCCCCEEEEc--------------CCCCCCHHHHHHHH----h
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD--QV----SFDFLLSANVPFIKIG--------------SGDSNNIPLIKYAA----S 104 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd--~~----svd~l~~l~v~~~KIa--------------S~d~~n~~LL~~~a----~ 104 (335)
+.|+.| .+..|-.++.-.|. ++ .+..+.+. +|.+-|. +.-+++..++.++- +
T Consensus 48 ~~~~~l---~~~~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~ 123 (318)
T 1vhn_A 48 KTEELL---PQPHERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRK 123 (318)
T ss_dssp HHHHHS---CCTTCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHH
T ss_pred hHHHhh---hCcCCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHH
Confidence 445555 55567677666653 33 34455566 8887774 33345566555433 3
Q ss_pred -cCCcEEEeC--CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHH
Q psy17999 105 -KQKPLIIST--GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIH 181 (335)
Q Consensus 105 -~gkPvilSt--G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~ 181 (335)
.+.||.+.. |.. . ++....++.+.+.+. +.+.+|+-+.-.......++..+.
T Consensus 124 ~~~~pv~vKir~G~~-~-~~~~~~a~~l~~~G~-----------------------d~i~v~g~~~~~~~~~~~~~~~i~ 178 (318)
T 1vhn_A 124 SVSGKFSVKTRLGWE-K-NEVEEIYRILVEEGV-----------------------DEVFIHTRTVVQSFTGRAEWKALS 178 (318)
T ss_dssp HCSSEEEEEEESCSS-S-CCHHHHHHHHHHTTC-----------------------CEEEEESSCTTTTTSSCCCGGGGG
T ss_pred hhCCCEEEEecCCCC-h-HHHHHHHHHHHHhCC-----------------------CEEEEcCCCccccCCCCcCHHHHH
Confidence 479999985 544 2 222244445554222 455556543211111235666777
Q ss_pred HHHHHCCCCCeecCCCCCChHHHHHHHH-cCCcE
Q psy17999 182 TLRSRYPDIPIGYSGHENGVHVCYAAVA-MGAQI 214 (335)
Q Consensus 182 ~L~~~fp~~pVG~SdHt~g~~~~~aAva-lGA~v 214 (335)
.+++ ++||..++--....-+..+++ .||+.
T Consensus 179 ~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~ 209 (318)
T 1vhn_A 179 VLEK---RIPTFVSGDIFTPEDAKRALEESGCDG 209 (318)
T ss_dssp GSCC---SSCEEEESSCCSHHHHHHHHHHHCCSE
T ss_pred HHHc---CCeEEEECCcCCHHHHHHHHHcCCCCE
Confidence 7776 689976654444555566666 79983
No 336
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=74.16 E-value=49 Score=30.89 Aligned_cols=152 Identities=13% Similarity=0.181 Sum_probs=94.6
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhH---HHHHhCCCCEEEEcCCCC-----CCHHHH---HHHHh-c
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSF---DFLLSANVPFIKIGSGDS-----NNIPLI---KYAAS-K 105 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~sv---d~l~~l~v~~~KIaS~d~-----~n~~LL---~~~a~-~ 105 (335)
..|+.++..++.+.+.+. .++++.-+-+ .+++ ..++++|+|.+-+-..-. +.-.++ +++|+ +
T Consensus 59 ~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~ 138 (318)
T 3qfe_A 59 FLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS 138 (318)
T ss_dssp GGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC
Confidence 459999999999988764 4677765543 2333 455578999887766632 233444 44554 6
Q ss_pred CCcEEEe-----C-CCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchH
Q psy17999 106 QKPLIIS-----T-GMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNV 179 (335)
Q Consensus 106 gkPvilS-----t-G~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~ 179 (335)
++||+|= | |..++.+.+.+.++. .+ +++-+--+| -|+..
T Consensus 139 ~lPiilYn~P~~t~g~~l~~~~~~~La~~----~p-----------------------nIvgiKdss--------gd~~~ 183 (318)
T 3qfe_A 139 PLPVVIYNFPGVCNGIDLDSDMITTIARK----NP-----------------------NVVGVKLTC--------ASVGK 183 (318)
T ss_dssp SSCEEEEECCC----CCCCHHHHHHHHHH----CT-----------------------TEEEEEESS--------CCHHH
T ss_pred CCCEEEEeCCcccCCCCCCHHHHHHHHhh----CC-----------------------CEEEEEeCC--------CCHHH
Confidence 9999994 4 877787777765431 22 343333222 47778
Q ss_pred HHHHHHHCC--CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 180 IHTLRSRYP--DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 180 i~~L~~~fp--~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+..+.+.++ ++. .||++.. ....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 184 ~~~~~~~~~~~~f~-v~~G~d~---~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 237 (318)
T 3qfe_A 184 ITRLAATLPPAAFS-VFGGQSD---FLIGGLSVGSAGCIA-------------AFANVFPKTVSKIYELYK 237 (318)
T ss_dssp HHHHHHHSCGGGCE-EEESCGG---GHHHHHHTTCCEEEC-------------GGGGTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEE-EEEecHH---HHHHHHHCCCCEEEe-------------cHHHhhHHHHHHHHHHHH
Confidence 888776663 232 3665432 23467889998 552 334567999999987664
No 337
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=74.07 E-value=25 Score=32.23 Aligned_cols=91 Identities=13% Similarity=0.153 Sum_probs=57.7
Q ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCc---eEEeeecCCCCCCccCC--C---
Q psy17999 105 KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSN---LSILHCVSAYPTPYHDI--N--- 176 (335)
Q Consensus 105 ~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~---l~llHC~s~YP~~~~~~--n--- 176 (335)
.++|++++-+.. +.+++.++++.+..... + .+-+|+.+........+ +
T Consensus 92 ~~~p~~~~i~g~-~~~~~~~~a~~~~~~g~-----------------------d~~~~iein~~~P~~~g~~~~g~~~~~ 147 (314)
T 2e6f_A 92 SKKPLFLSISGL-SVEENVAMVRRLAPVAQ-----------------------EKGVLLELNLSCPNVPGKPQVAYDFEA 147 (314)
T ss_dssp TTCCEEEEECCS-SHHHHHHHHHHHHHHHH-----------------------HHCCEEEEECCCCCSTTCCCGGGSHHH
T ss_pred CCCcEEEEeCCC-CHHHHHHHHHHHHHhCC-----------------------CcCceEEEEcCCCCCCCchhhcCCHHH
Confidence 378999999988 99999999999876222 4 55566544332110111 1
Q ss_pred -chHHHHHHHHCCCCCeec--C-CCCCC--hHHHHHHHHcC-CcEEEeccC
Q psy17999 177 -LNVIHTLRSRYPDIPIGY--S-GHENG--VHVCYAAVAMG-AQIIEKHFT 220 (335)
Q Consensus 177 -L~~i~~L~~~fp~~pVG~--S-dHt~g--~~~~~aAvalG-A~vIEkH~t 220 (335)
+..+..+|+.. ++||.. + +-+.. ...+..+...| ++.|--|-+
T Consensus 148 ~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 148 MRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp HHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred HHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 34678888877 788852 2 32211 22356677889 998776644
No 338
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=74.07 E-value=14 Score=32.91 Aligned_cols=87 Identities=8% Similarity=0.052 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHcCCceEeccC--Ch----hhHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEeCCCC----
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAM--DQ----VSFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIISTGML---- 116 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpf--d~----~svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilStG~~---- 116 (335)
.+-+..+.+.|++.|..++.... |. +.++.+.+.++|.+-+.+.+... .+.++++.+.|.||++--...
T Consensus 18 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~ 97 (313)
T 3m9w_A 18 QKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 97 (313)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCCTTSC
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcCCCCC
Confidence 35567788999999987766443 33 23455666789999988877665 689999999999988642211
Q ss_pred C-------CHHHHHHHHHHHH-h-cCC
Q psy17999 117 P-------SIEHVDNIYTTVK-Q-YHS 134 (335)
Q Consensus 117 ~-------tl~Ei~~Av~~i~-~-g~~ 134 (335)
. ..+-...|++++. . |..
T Consensus 98 ~~~~V~~D~~~~g~~a~~~L~~~~G~~ 124 (313)
T 3m9w_A 98 IDFYISFDNEKVGELQAKALVDIVPQG 124 (313)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHCSSE
T ss_pred ceEEEecCHHHHHHHHHHHHHHhCCCC
Confidence 0 1233556778877 5 544
No 339
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=73.79 E-value=19 Score=27.40 Aligned_cols=78 Identities=8% Similarity=-0.002 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHcCCceEeccCC-hhhHHHHHhCCCCEEEEcCC---CCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMD-QVSFDFLLSANVPFIKIGSG---DSNNIPLIKYAASK-QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd-~~svd~l~~l~v~~~KIaS~---d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei 122 (335)
......|.+..++.|+.+..+..+ .+.++.+.+..++++-+.-. +.+-+.+++.+.+. ..|||+-|+.. +.+.+
T Consensus 19 ~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~-~~~~~ 97 (140)
T 3cg0_A 19 RLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ-DVETF 97 (140)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC-CHHHH
T ss_pred HHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC-CHHHH
Confidence 445566777777789988754444 55667777777888877642 46678888888764 78999999988 76666
Q ss_pred HHHH
Q psy17999 123 DNIY 126 (335)
Q Consensus 123 ~~Av 126 (335)
..++
T Consensus 98 ~~~~ 101 (140)
T 3cg0_A 98 QRAK 101 (140)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 340
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=73.69 E-value=47 Score=29.21 Aligned_cols=83 Identities=10% Similarity=0.004 Sum_probs=47.5
Q ss_pred HHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCC
Q psy17999 97 PLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDIN 176 (335)
Q Consensus 97 ~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~n 176 (335)
+.++.+.+.++||+|=++.+ .+++ ++.+++.+. .+++ +||.+..+
T Consensus 130 ~~~~la~~~~lPv~iH~~~a--~~~~---~~il~~~~~----------------------~~~v-~H~~~g~~------- 174 (272)
T 2y1h_A 130 RQIQLAKRLNLPVNVHSRSA--GRPT---INLLQEQGA----------------------EKVL-LHAFDGRP------- 174 (272)
T ss_dssp HHHHHHHHHTCCEEEECTTC--HHHH---HHHHHHTTC----------------------CSEE-EETCCSCH-------
T ss_pred HHHHHHHHhCCcEEEEeCCc--HHHH---HHHHHhCCC----------------------CCEE-EEccCCCH-------
Confidence 55666777899999999965 3333 455555222 0454 49987532
Q ss_pred chHHHHHHHHCCCCCeecCCCCC-ChHHHHHHHHcCCc--EEEe
Q psy17999 177 LNVIHTLRSRYPDIPIGYSGHEN-GVHVCYAAVAMGAQ--IIEK 217 (335)
Q Consensus 177 L~~i~~L~~~fp~~pVG~SdHt~-g~~~~~aAvalGA~--vIEk 217 (335)
..+..+.+ . |+-+++++-.. +..+-.++-.++.+ +||.
T Consensus 175 -~~~~~~~~-~-g~~i~~~g~~~~~~~~~~~~~~~~~drll~eT 215 (272)
T 2y1h_A 175 -SVAMEGVR-A-GYFFSIPPSIIRSGQKQKLVKQLPLTSICLET 215 (272)
T ss_dssp -HHHHHHHH-T-TCEEEECGGGGTCHHHHHHHHHSCGGGEEECC
T ss_pred -HHHHHHHH-C-CCEEEECCcccCcHHHHHHHHhCCHHHEEEec
Confidence 34455544 3 77777764332 33333344455554 6663
No 341
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=73.51 E-value=25 Score=25.98 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCc
Q psy17999 98 LIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINL 177 (335)
Q Consensus 98 LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL 177 (335)
+-+.+...|..++.....+ ..|++.+..... .+++++-..+ ..-.+
T Consensus 18 l~~~l~~~g~~vv~~~~~~------~~a~~~~~~~~~--dlil~D~~l~--------------------------~~~g~ 63 (120)
T 1tmy_A 18 LKDIITKAGYEVAGEATNG------REAVEKYKELKP--DIVTMDITMP--------------------------EMNGI 63 (120)
T ss_dssp HHHHHHHTTCEEEEEESSH------HHHHHHHHHHCC--SEEEEECSCG--------------------------GGCHH
T ss_pred HHHHHhhcCcEEEEEECCH------HHHHHHHHhcCC--CEEEEeCCCC--------------------------CCcHH
Q ss_pred hHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy17999 178 NVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGI 246 (335)
Q Consensus 178 ~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~i 246 (335)
..+..+++..|+.||.+-+..........|...||. +|.| ..++++|...++.+
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~K---------------P~~~~~l~~~i~~~ 118 (120)
T 1tmy_A 64 DAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVK---------------PFQPSRVVEALNKV 118 (120)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEES---------------SCCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeC---------------CCCHHHHHHHHHHH
No 342
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=73.46 E-value=28 Score=26.48 Aligned_cols=79 Identities=4% Similarity=-0.069 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~ 123 (335)
......|.+..++.|..+....-..+.++.+.+..++++-+.. .+.+-+.+++++.+. ..|||+-|+.. +.+.+.
T Consensus 17 ~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~ 95 (137)
T 3hdg_A 17 TDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFS-EMKYFI 95 (137)
T ss_dssp HHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCC-CHHHHH
T ss_pred HHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCc-ChHHHH
Confidence 3445566677777777766665566677888877788877764 466778999998875 57899999988 877776
Q ss_pred HHHH
Q psy17999 124 NIYT 127 (335)
Q Consensus 124 ~Av~ 127 (335)
.+.+
T Consensus 96 ~~~~ 99 (137)
T 3hdg_A 96 KAIE 99 (137)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6643
No 343
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=73.42 E-value=14 Score=35.87 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=67.8
Q ss_pred CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc
Q psy17999 94 NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY 172 (335)
Q Consensus 94 ~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~ 172 (335)
.++..++++.+ +++||+++ |.. +.++...+++ .|- +.+.++....-....
T Consensus 239 ~~~~~i~~lr~~~~~PvivK-gv~-~~e~A~~a~~---aGa------------------------d~I~vs~~ggr~~~~ 289 (392)
T 2nzl_A 239 ISWEDIKWLRRLTSLPIVAK-GIL-RGDDAREAVK---HGL------------------------NGILVSNHGARQLDG 289 (392)
T ss_dssp CCHHHHHHHC--CCSCEEEE-EEC-CHHHHHHHHH---TTC------------------------CEEEECCGGGTSSTT
T ss_pred HHHHHHHHHHHhhCCCEEEE-ecC-CHHHHHHHHH---cCC------------------------CEEEeCCCCCCcCCC
Confidence 35777888766 58999999 445 7777555543 243 233332111101111
Q ss_pred cCCCchHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 173 HDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 173 ~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
....+..+..+++..+ ++||..++--....-...|+++||+.+- +-|-......|.+ . -.+-+..+.+.++..
T Consensus 290 g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~---g-v~~~l~~l~~el~~~ 365 (392)
T 2nzl_A 290 VPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEK---G-VQDVLEILKEEFRLA 365 (392)
T ss_dssp CCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChH---H-HHHHHHHHHHHHHHH
Confidence 2345677777876553 5888655544444445568889998332 2111100000000 0 013455667777777
Q ss_pred HHHhCC
Q psy17999 250 EQSLGS 255 (335)
Q Consensus 250 ~~alG~ 255 (335)
-..+|.
T Consensus 366 m~~~G~ 371 (392)
T 2nzl_A 366 MALSGC 371 (392)
T ss_dssp HHHHTC
T ss_pred HHHhCC
Confidence 777785
No 344
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=73.33 E-value=25 Score=33.59 Aligned_cols=114 Identities=14% Similarity=0.139 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHcCCce-EeccCC-----hh-----hHHHHHhC------------C--CCEE-EEcCCC-CCC--HHHHH
Q psy17999 50 EYVMLQQCADQVDIMF-TASAMD-----QV-----SFDFLLSA------------N--VPFI-KIGSGD-SNN--IPLIK 100 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f-~stpfd-----~~-----svd~l~~l------------~--v~~~-KIaS~d-~~n--~~LL~ 100 (335)
.+..|.+.+++.|+.+ .+|-+. +. +++.|.++ + +-++ +||... .+. ...++
T Consensus 114 ~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~~vkag~IGEiGld~~~t~~q~~~f~ 193 (364)
T 3k2g_A 114 DPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGTDARIGLIGEIGVSSDFTAEEEKSLR 193 (364)
T ss_dssp CHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTBSCCCSSEEEEECCTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccCCcceeEEEEEEcCCCCCHHHHHHHH
Confidence 6788999999999754 444333 32 34444321 1 2236 577664 221 11233
Q ss_pred H----HHhcCCcEEEeC-CC-CCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCcc
Q psy17999 101 Y----AASKQKPLIIST-GM-LPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYH 173 (335)
Q Consensus 101 ~----~a~~gkPvilSt-G~-~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~ 173 (335)
+ ..++|+||++=+ |. . .-.|+. +.+++ +.. ...+++.||..+-
T Consensus 194 aq~~~A~~~glPV~iH~~gr~~-a~~e~l---~iL~e~g~~---------------------~~~vvi~H~~~s~----- 243 (364)
T 3k2g_A 194 GAARAQVRTGLPLMVHLPGWFR-LAHRVL---DLVEEEGAD---------------------LRHTVLCHMNPSH----- 243 (364)
T ss_dssp HHHHHHHHHCCCEEEECCTTSC-CHHHHH---HHHHHTTCC---------------------GGGEEECCCGGGT-----
T ss_pred HHHHHHHHHCCeEEEecCCCCc-cHHHHH---HHHHHcCCC---------------------CCceEEECCCCCC-----
Confidence 3 345799999997 43 3 344444 34444 322 0157788998421
Q ss_pred CCCchHHHHHHHHCCCCCeecCC
Q psy17999 174 DINLNVIHTLRSRYPDIPIGYSG 196 (335)
Q Consensus 174 ~~nL~~i~~L~~~fp~~pVG~Sd 196 (335)
.++.....+-++ +.-|||++
T Consensus 244 -~~~e~a~~~l~~--G~~I~f~g 263 (364)
T 3k2g_A 244 -MDPVYQATLAQR--GAFLEFDM 263 (364)
T ss_dssp -TCHHHHHHHHHH--TCEEEECC
T ss_pred -CCHHHHHHHHhC--CcEEEecC
Confidence 245555555543 67777764
No 345
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=73.17 E-value=24 Score=33.89 Aligned_cols=128 Identities=13% Similarity=0.169 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHH
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~A 125 (335)
.+.+--..|.+.|++.|+.+.+.-... .+++- . ...+..++.. -+.|++-+-|..-+.++..++
T Consensus 100 ~~~~in~~lA~~a~~~G~~~~vGs~~~----~le~~--~--------~~~~~v~r~~--P~~~~ianig~~~~~e~~~~~ 163 (365)
T 3sr7_A 100 KGKEVNEKLAQVADTCGLLFVTGSYST----ALKNP--D--------DTSYQVKKSR--PHLLLATNIGLDKPYQAGLQA 163 (365)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEC---------------------------------------CCEEEEEETTSCHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCeecccccc----cccCc--c--------ccceEehhhC--CCCcEEEEeCCCCCHHHHHHH
Confidence 366777889999999999988754432 11111 1 0112223322 467888887765467778888
Q ss_pred HHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC--CCCCCccCCCc----hHHHHHHHHCCCCCeecC--CC
Q psy17999 126 YTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS--AYPTPYHDINL----NVIHTLRSRYPDIPIGYS--GH 197 (335)
Q Consensus 126 v~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s--~YP~~~~~~nL----~~i~~L~~~fp~~pVG~S--dH 197 (335)
++.+.. +...+|... .+-.|..+.++ ..|..+++.. ++||+.= ..
T Consensus 164 ve~~~a--------------------------dal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~vg~ 216 (365)
T 3sr7_A 164 VRDLQP--------------------------LFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEVGF 216 (365)
T ss_dssp HHHHCC--------------------------SCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEECSS
T ss_pred HHhcCC--------------------------CEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEECCC
Confidence 776532 334455432 22233444555 6789999998 8998542 33
Q ss_pred CCChHHHHHHHHcCCcEEE
Q psy17999 198 ENGVHVCYAAVAMGAQIIE 216 (335)
Q Consensus 198 t~g~~~~~aAvalGA~vIE 216 (335)
......+..++.+||+.|=
T Consensus 217 g~s~e~A~~l~~aGad~I~ 235 (365)
T 3sr7_A 217 GMDVKTIQTAIDLGVKTVD 235 (365)
T ss_dssp CCCHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHcCCCEEE
Confidence 3456778889999999765
No 346
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=73.12 E-value=14 Score=32.72 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHcCCceEeccCC--h---hhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC------
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD--Q---VSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP------ 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd--~---~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~------ 117 (335)
+-+..+.+.+++.|..++....+ . +.++.+.+.++|.+-+.+.+... +.++.+.+ +.|+++--....
T Consensus 28 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~~~~~~~~~ 105 (289)
T 3k9c_A 28 DLVEQIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARASGLPGVGA 105 (289)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSCCSSTTSEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCCCCCCCCCE
Confidence 44667788999999877654432 2 23455556689999888877654 88888877 999876432110
Q ss_pred ----CHHHHHHHHHHHHh-cCC
Q psy17999 118 ----SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 ----tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 106 V~~D~~~~~~~a~~~L~~~G~~ 127 (289)
T 3k9c_A 106 VRGDDVAGITLAVDHLTELGHR 127 (289)
T ss_dssp EEECHHHHHHHHHHHHHHTTCC
T ss_pred EEeChHHHHHHHHHHHHHCCCC
Confidence 22345567777776 554
No 347
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=73.10 E-value=11 Score=33.71 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=41.9
Q ss_pred hHHHHHhCCCCEEEEcCC------CCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 74 SFDFLLSANVPFIKIGSG------DSNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 74 svd~l~~l~v~~~KIaS~------d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.+..++++|++++-+.+. .-.|+.+++++.+. +.|||.+-|.+ +.+++.++.+
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~-~~ed~~~~~~ 220 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAG-KMEHFLEAFL 220 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCC-SHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCC-CHHHHHHHHH
Confidence 346677899999887432 22479999998874 89999999999 9999988764
No 348
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=72.97 E-value=25 Score=27.06 Aligned_cols=79 Identities=13% Similarity=0.203 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHcCCc--eEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcEEEeCCCCCCH
Q psy17999 48 QEEYVMLQQCADQVDIM--FTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS----KQKPLIISTGMLPSI 119 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~--f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPvilStG~~~tl 119 (335)
......|.+..++.|.. +....-..+.++.+.+..+|++-+.. .+.+-+.+++++.+ .+.|||+-|+.. +.
T Consensus 15 ~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~ 93 (144)
T 3kht_A 15 PDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV-SD 93 (144)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC-CH
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC-CH
Confidence 34556677778888887 33333444556777777788887764 35667899999887 368999999988 77
Q ss_pred HHHHHHHH
Q psy17999 120 EHVDNIYT 127 (335)
Q Consensus 120 ~Ei~~Av~ 127 (335)
+.+..+.+
T Consensus 94 ~~~~~~~~ 101 (144)
T 3kht_A 94 DRAKQCMA 101 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
No 349
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=72.84 E-value=7.4 Score=35.65 Aligned_cols=57 Identities=9% Similarity=0.164 Sum_probs=49.1
Q ss_pred HHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Q psy17999 76 DFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQY 132 (335)
Q Consensus 76 d~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~g 132 (335)
+++.+-++|++-|++..-.+.+++.++.+.||+|++...++.+.+|.++.++..++.
T Consensus 63 ~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~ 119 (315)
T 3c1a_A 63 SVVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKAT 119 (315)
T ss_dssp HHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHc
Confidence 344445799999999999999999999999999999988877999999988877763
No 350
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=72.61 E-value=6.8 Score=35.83 Aligned_cols=111 Identities=11% Similarity=0.115 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhh----------HHHHHhCCCCEEEEcCCCCC---CHHHHHHHHh-----cCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVS----------FDFLLSANVPFIKIGSGDSN---NIPLIKYAAS-----KQK 107 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~s----------vd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~-----~gk 107 (335)
++.+....|.+.+++.|..++.|-.|.+. +..+.++|.|++||+-.--+ |+.|++...+ .++
T Consensus 123 ~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~ 202 (258)
T 4h3d_A 123 MGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADR 202 (258)
T ss_dssp GCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSS
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 35677899999999999999998865321 34455689999999976544 3455554433 368
Q ss_pred cEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH
Q psy17999 108 PLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS 185 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~ 185 (335)
|+|- -+|+ ...-+-+.+.-+- | =.+-||.-.-++.+-++.+..|..+.+
T Consensus 203 P~I~-~~MG-~~G~~SRi~~~~f-G--------------------------S~lTf~~~~~~sAPGQl~~~el~~~l~ 251 (258)
T 4h3d_A 203 PIIT-MSMS-GMGVISRLCGEIF-G--------------------------SALTFGAAKSVSAPGQISFKELNSVLN 251 (258)
T ss_dssp CBEE-EECT-GGGGGGGTCHHHH-C--------------------------BCEEECBCC---CTTCCBHHHHHHHHH
T ss_pred CEEE-EeCC-CCChHHHHHHHHh-C--------------------------CceEeccCCCCCCCCCCCHHHHHHHHH
Confidence 8762 3444 3333332222110 1 124456656677778888877765543
No 351
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=72.54 E-value=58 Score=29.88 Aligned_cols=151 Identities=10% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HhhcCCHHHHHHHHHHHHH------cCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCC-------HHHHHHHHh-cCC
Q psy17999 42 QHLEFSQEEYVMLQQCADQ------VDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNN-------IPLIKYAAS-KQK 107 (335)
Q Consensus 42 ~~~el~~e~~~~L~~~~~~------~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n-------~~LL~~~a~-~gk 107 (335)
+...|+.++..++.+.+.+ .|+.-.+|.-..+....++++|+|.+-+-..-.+- ....+++|+ +++
T Consensus 45 E~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~l 124 (293)
T 1w3i_A 45 LGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPH 124 (293)
T ss_dssp TGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSS
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCC
Q ss_pred cEEE-----eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLII-----STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 Pvil-----StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+| -||..++.+.+.+ .+ +++-+-=+| -|+..+..
T Consensus 125 PiilYn~P~~tg~~l~~~~~~~--------~p-----------------------nIvgiKds~--------gd~~~~~~ 165 (293)
T 1w3i_A 125 PVYLYNYPTATGKDIDAKVAKE--------IG-----------------------CFTGVKDTI--------ENIIHTLD 165 (293)
T ss_dssp CEEEEECHHHHSCCCCHHHHHH--------HC-----------------------CEEEEEECC--------SCHHHHHH
T ss_pred CEEEEECchhhCcCCCHHHHHh--------cC-----------------------CEEEEEeCC--------CCHHHHHH
Q ss_pred HHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 183 LRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 183 L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
+++ .++--..||++.. ....+.++||+ +|= -.+.+-|+.+.+|.+.++.
T Consensus 166 ~~~-~~~~f~v~~G~d~---~~~~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~~ 215 (293)
T 1w3i_A 166 YKR-LNPNMLVYSGSDM---LIATVASTGLDGNVA-------------AGSNYLPEVTVTIKKLAME 215 (293)
T ss_dssp HHH-HCTTSEEEECCST---THHHHHHTTCCEEEC-------------GGGGTCHHHHHHHHHHHHT
T ss_pred HHh-cCCCEEEEEccHH---HHHHHHHcCCCEEEe-------------CHHHhCHHHHHHHHHHHHC
No 352
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=72.48 E-value=36 Score=29.86 Aligned_cols=164 Identities=12% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHH--cCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 46 FSQEEYVMLQQCADQ--VDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 46 l~~e~~~~L~~~~~~--~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
.+.++.++|.+.... .-+.++..+-..+-.+.+.+++.|++++...+ ....++.+.+ +.|||-.-.+. +..++.
T Consensus 38 V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e--~~~~~~~l~~-~~~vika~~v~-~~~~l~ 113 (205)
T 1nsj_A 38 ISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGEE--PIELCRKIAE-RILVIKAVGVS-NERDME 113 (205)
T ss_dssp CCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECSCC--CHHHHHHHHT-TSEEEEEEEES-SHHHHH
T ss_pred CCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC--CHHHHHHHhc-CCCEEEEEEcC-CHHHHH
Confidence 455666666554331 12223333333333566677899999999765 5566666532 68999777777 666654
Q ss_pred HHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCC-CCCCccCCCchHHHHHHHHCCCCCeecCCCCCChH
Q psy17999 124 NIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA-YPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVH 202 (335)
Q Consensus 124 ~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~-YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~ 202 (335)
.+.++ . . +..|+-..+. |--.-...||..+..++ .. ..|+..++--...-
T Consensus 114 ~~~~~---~-~-----------------------d~~LlD~~~~~~GGtG~~fdw~~l~~~~-~~-~~p~~LAGGL~peN 164 (205)
T 1nsj_A 114 RALNY---R-E-----------------------FPILLDTKTPEYGGSGKTFDWSLILPYR-DR-FRYLVLSGGLNPEN 164 (205)
T ss_dssp HHGGG---T-T-----------------------SCEEEEESCSSSSSCCSCCCGGGTGGGG-GG-SSCEEEESSCCTTT
T ss_pred HHHHc---C-C-----------------------CEEEECCCCCCCCCCCCccCHHHHHhhh-cC-CCcEEEECCCCHHH
Confidence 32211 1 2 4445543221 21223567887765542 22 56887765333222
Q ss_pred HHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 203 VCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 203 ~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
+..|.-..++.-|--.=-... .+| --+++.++++++.+|.
T Consensus 165 V~~ai~~~~p~gVDvsSGvE~-~pG-----~KD~~ki~~fi~~~r~ 204 (205)
T 1nsj_A 165 VRSAIDVVRPFAVDVSSGVEA-FPG-----KKDHDSIKMFIKNAKG 204 (205)
T ss_dssp HHHHHHHHCCSEEEESGGGEE-ETT-----EECHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCceec-CCC-----CcCHHHHHHHHHHHhh
Confidence 322222235443221111110 011 1368899999888763
No 353
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=72.38 E-value=17 Score=34.06 Aligned_cols=81 Identities=10% Similarity=0.121 Sum_probs=60.8
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC----------C---CCCHHHH---HHHHh-cCCcEEEe--C
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG----------D---SNNIPLI---KYAAS-KQKPLIIS--T 113 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~----------d---~~n~~LL---~~~a~-~gkPvilS--t 113 (335)
.|++.-++-+..++.++||.-++..+++.|++++-++|. | ++--.++ +.+++ +++|||.. +
T Consensus 13 ~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~ 92 (298)
T 3eoo_A 13 KFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDT 92 (298)
T ss_dssp HHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTT
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCC
Confidence 455666677899999999999999999999999999881 2 2222333 44443 58999976 7
Q ss_pred CCCCCHHHHHHHHHHHHh-cCC
Q psy17999 114 GMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 114 G~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
|-+ +.+++.+.+..+.+ |-.
T Consensus 93 Gyg-~~~~v~~~v~~l~~aGaa 113 (298)
T 3eoo_A 93 GWG-GAFNIARTIRSFIKAGVG 113 (298)
T ss_dssp CSS-SHHHHHHHHHHHHHTTCS
T ss_pred CCC-CHHHHHHHHHHHHHhCCe
Confidence 766 88888888887776 543
No 354
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=72.35 E-value=19 Score=32.30 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCC----h---hh---HHHHHhCCCCEEEEcCCCCC---CHHHHHHHHh----cCCcE
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMD----Q---VS---FDFLLSANVPFIKIGSGDSN---NIPLIKYAAS----KQKPL 109 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd----~---~s---vd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~----~gkPv 109 (335)
+.+....|.+.+++.|..++.|-+| + +- +..+.++|+|++||+-.--+ |+.|++...+ ..+|+
T Consensus 110 ~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~ 189 (238)
T 1sfl_A 110 DIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKV 189 (238)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSEE
T ss_pred ChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHhhcCCCCE
Confidence 6677899999999999998888765 2 22 23445689999999977544 4445544333 36786
Q ss_pred E-EeCC
Q psy17999 110 I-ISTG 114 (335)
Q Consensus 110 i-lStG 114 (335)
| ++.|
T Consensus 190 I~~~MG 195 (238)
T 1sfl_A 190 VGISMS 195 (238)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 5 5666
No 355
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=72.32 E-value=18 Score=31.88 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=56.2
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHh-c-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSN-NIPLIKYAAS-K-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~-~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
-..+.++|+++|+.++..++++..+....+.|+|++|+=..... -..+|+++.. . +.|+ +-+|+= +++ ++-+
T Consensus 98 d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~~ipv-vaiGGI-~~~---n~~~ 172 (214)
T 1wbh_A 98 TEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRF-CPTGGI-SPA---NYRD 172 (214)
T ss_dssp CHHHHHHHHHSSSCEEEEESSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEE-EEBSSC-CTT---THHH
T ss_pred CHHHHHHHHHhCCCEEEecCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHhhhCCCCeE-EEECCC-CHH---HHHH
Confidence 45788999999999998899999998899999999999654443 3788888876 3 5787 455544 444 3334
Q ss_pred HHHh
Q psy17999 128 TVKQ 131 (335)
Q Consensus 128 ~i~~ 131 (335)
++..
T Consensus 173 ~l~a 176 (214)
T 1wbh_A 173 YLAL 176 (214)
T ss_dssp HHTS
T ss_pred HHhc
Confidence 4544
No 356
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=72.27 E-value=2.1 Score=40.16 Aligned_cols=52 Identities=25% Similarity=0.434 Sum_probs=40.9
Q ss_pred CCCCCeecCCCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 187 YPDIPIGYSGHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 187 fp~~pVG~SdHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
.|++|| |.. ...+++|...||.|+=-|.--+ |...|++|+-|+++++.||+.
T Consensus 26 ~P~lPv-----TpeEia~~A~~a~~AGAaivHlHvRd~------~G~ps~d~~~~~e~~~~IR~~ 79 (282)
T 2y7e_A 26 QPNLPI-----TPEEQAKEAKACFEAGARVIHLHIRED------DGRPSQRLDRFQEAISAIREV 79 (282)
T ss_dssp CTTCCC-----SHHHHHHHHHHHHHHTEEEEEECEECT------TSCEECCHHHHHHHHHHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHHHcCCcEEEEeecCC------CCCcCCCHHHHHHHHHHHHHH
Confidence 466666 333 4457889999999999887642 566789999999999999975
No 357
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=72.05 E-value=21 Score=31.38 Aligned_cols=84 Identities=8% Similarity=0.029 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML------ 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~------ 116 (335)
+-+..+.+.+++.|..++... .|.+ .++.+.+.++|.+-+.+.+.. -+.++.+. .+.|+++--...
T Consensus 25 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~~~~~~~~ 102 (285)
T 3c3k_A 25 AVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEYDPLSTVS 102 (285)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSCCTTSSSC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccccCCCCCC
Confidence 346667888999998776543 3332 245556678999988776554 47788887 899987643211
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |..
T Consensus 103 ~V~~D~~~~g~~a~~~L~~~G~~ 125 (285)
T 3c3k_A 103 SVSIDDVAASEYVVDQLVKSGKK 125 (285)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCC
T ss_pred EEEEChHHHHHHHHHHHHHcCCC
Confidence 0 12334567777766 544
No 358
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=71.95 E-value=20 Score=26.67 Aligned_cols=77 Identities=6% Similarity=0.083 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~Ei 122 (335)
.....|.+..++.|..+....-..+.++.+.+..++++-+.- .+++-+.+++++.+. ..|||+-|+.. +.+..
T Consensus 12 ~~~~~l~~~L~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~ 90 (124)
T 1mb3_A 12 LNMKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFA-MKGDE 90 (124)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-------CH
T ss_pred HHHHHHHHHHHHcCcEEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCC-CHHHH
Confidence 445556666777888877554445556777666677766543 456778899998863 57999999877 55555
Q ss_pred HHHH
Q psy17999 123 DNIY 126 (335)
Q Consensus 123 ~~Av 126 (335)
..+.
T Consensus 91 ~~~~ 94 (124)
T 1mb3_A 91 ERIR 94 (124)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 359
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=71.81 E-value=16 Score=32.19 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=42.0
Q ss_pred hhHHHHHhCCCCEEEEcCCC------CCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSGD------SNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~d------~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+..+.++|++.+-+.+.+ -.++.+++++.+. +.|||.+-|.+ +.+++..+.+
T Consensus 155 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~-~~~d~~~~~~ 215 (253)
T 1thf_D 155 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAG-KMEHFLEAFL 215 (253)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCC-SHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCC-CHHHHHHHHH
Confidence 33567778999988775432 2479999998864 89999999999 9999988754
No 360
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=71.77 E-value=12 Score=33.04 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=42.1
Q ss_pred hhHHHHHhCCCCEEEEcCC------CCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSG------DSNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~------d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+..++++|++.+-+-+. .-.|+.+++++.+. +.|||.+-|.. +.+++..+.+
T Consensus 150 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia~GGI~-~~~d~~~~~~ 210 (244)
T 1vzw_A 150 ETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVS-SLDDLRAIAG 210 (244)
T ss_dssp HHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEESCCC-SHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEEECCCC-CHHHHHHHHh
Confidence 3356777899998877552 23689999999874 89999999999 9999988654
No 361
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=71.75 E-value=3.9 Score=38.45 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh--hh----HHHHHhCCCCEEEEcCCCCCC-----HHHHHHHHh-cCCcEEE
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ--VS----FDFLLSANVPFIKIGSGDSNN-----IPLIKYAAS-KQKPLII 111 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~--~s----vd~l~~l~v~~~KIaS~d~~n-----~~LL~~~a~-~gkPvil 111 (335)
.-+.+|.+. +.|...+..|+-. +. ++.+.+.|.|+|-|||.+++| .++++++.+ +++||||
T Consensus 29 ~~~~~l~~~--~~~~~~liDPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 29 RVLARLREH--QPGPVHIIDPFKVPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp HHHHHHHHS--CCEEEEEECTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHhc--cCCceEEECCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 456677777 7888899999653 22 344556799999999887883 357777777 7999999
No 362
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=71.53 E-value=34 Score=27.17 Aligned_cols=100 Identities=14% Similarity=0.132 Sum_probs=59.7
Q ss_pred cEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHC
Q psy17999 108 PLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRY 187 (335)
Q Consensus 108 PvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~f 187 (335)
-+|++.| + +.....+|++.++..+. ++.++|..+-+|-|.+. +..+-+.+
T Consensus 16 v~iv~~G-s-~~~~a~eA~~~L~~~Gi-----------------------~v~vi~~r~~~P~d~~~-----l~~~~~~~ 65 (118)
T 3ju3_A 16 ITFVTWG-S-QKGPILDVIEDLKEEGI-----------------------SANLLYLKMFSPFPTEF-----VKNVLSSA 65 (118)
T ss_dssp EEEEEEG-G-GHHHHHHHHHHHHHTTC-----------------------CEEEEEECSSCSCCHHH-----HHHHHTTC
T ss_pred EEEEEEC-c-cHHHHHHHHHHHHHCCC-----------------------ceEEEEECeEecCCHHH-----HHHHHcCC
Confidence 4688888 4 57888899998876333 78999999999977642 33333445
Q ss_pred CCCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy17999 188 PDIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGI 246 (335)
Q Consensus 188 p~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~i 246 (335)
+..|-.-++..|-.........|..++..- -.+.|.+ ++|+++.+.++.+
T Consensus 66 -~~vvvvE~~~~G~l~~~i~~~~~~~~~~~i----~~~~G~~----~~~~ei~~~i~~~ 115 (118)
T 3ju3_A 66 -NLVIDVESNYTAQAAQMIKLYTGIDIKNKI----LKYNGRH----MTEDEILKSAKEI 115 (118)
T ss_dssp -SCCCCCCCCCCCCHHHHHHHHHCCCCCCCC----CCBTTBC----CCHHHHHHHHHHH
T ss_pred -CEEEEEECCCCCcHHHHHHHHcCCCceeEE----eeeCCee----CCHHHHHHHHHHH
Confidence 333444445445433333334454322211 1233433 7899998877654
No 363
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=71.45 E-value=31 Score=31.83 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=21.1
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+.|||..+|.. +.+|..+-.+..++ |..
T Consensus 76 rvpviaGvg~~-~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 76 RVPVIAGTGAN-NTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp SSCEEEECCCS-SHHHHHHHHHHHHHTTCS
T ss_pred CCcEEEeCCCc-CHHHHHHHHHHHHHcCCC
Confidence 57999999987 77777776676666 544
No 364
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=71.41 E-value=23 Score=34.06 Aligned_cols=78 Identities=10% Similarity=0.060 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHcCCceEec-c---CChhhHHHHHhCCCCEEEEcCCCCC-------------------------CH---
Q psy17999 49 EEYVMLQQCADQVDIMFTAS-A---MDQVSFDFLLSANVPFIKIGSGDSN-------------------------NI--- 96 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~st-p---fd~~svd~l~~l~v~~~KIaS~d~~-------------------------n~--- 96 (335)
..+..|.+.++..+++++.- + ++.+.+..+.+.|++++.|+..-=+ +|
T Consensus 174 ~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~p 253 (368)
T 3vkj_A 174 YALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVP 253 (368)
T ss_dssp HHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhcccccccccc
Confidence 46778888888999999885 4 7889999999999999999432111 11
Q ss_pred --HHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 97 --PLIKYAASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 97 --~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
..|..+++. +.|||.+-|.. +-.++.+|+.
T Consensus 254 t~~~l~~v~~~~~~ipvia~GGI~-~~~d~~kal~ 287 (368)
T 3vkj_A 254 TAASIMEVRYSVPDSFLVGSGGIR-SGLDAAKAIA 287 (368)
T ss_dssp HHHHHHHHHHHSTTCEEEEESSCC-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEECCCC-CHHHHHHHHH
Confidence 233444433 48999999999 9999998876
No 365
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=71.38 E-value=19 Score=28.24 Aligned_cols=79 Identities=8% Similarity=0.050 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei 122 (335)
.......|.+..++.|..+.+..-..+.++.+.+..+|++-+.. .+.+-+.+++.+.+. ..|||+-|+.. +.+.+
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~ 94 (154)
T 2rjn_A 16 EQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA-DAQAT 94 (154)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG-GHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC-CHHHH
Confidence 34455667777777898877544445666777777788877654 356778899998774 67999999877 66655
Q ss_pred HHHH
Q psy17999 123 DNIY 126 (335)
Q Consensus 123 ~~Av 126 (335)
..++
T Consensus 95 ~~~~ 98 (154)
T 2rjn_A 95 IDAV 98 (154)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 366
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=71.37 E-value=7.6 Score=34.83 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHcCCceEecc--CChhh----HHHHHhCCCCEEEEcCCCC------CCHHHHHHHHhcCCcEEEeCCC
Q psy17999 48 QEEYVMLQQCADQVDIMFTASA--MDQVS----FDFLLSANVPFIKIGSGDS------NNIPLIKYAASKQKPLIISTGM 115 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stp--fd~~s----vd~l~~l~v~~~KIaS~d~------~n~~LL~~~a~~gkPvilStG~ 115 (335)
.+++..+.+.|++.+++++... .+.+. .....++|+||+|...+-. .+..+++++.....||..|=|.
T Consensus 106 ~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v~VkaaGGi 185 (220)
T 1ub3_A 106 EAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRAQVKAAGGI 185 (220)
T ss_dssp HHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEESSC
T ss_pred HHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEECCC
Confidence 3678888888888888865432 34333 3455678999999996543 3678888877778899999998
Q ss_pred CCCHHHHHHHHHHHHhcCC
Q psy17999 116 LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~g~~ 134 (335)
. |.++.. +++..|..
T Consensus 186 r-t~~~al---~~i~aGa~ 200 (220)
T 1ub3_A 186 R-DRETAL---RMLKAGAS 200 (220)
T ss_dssp C-SHHHHH---HHHHTTCS
T ss_pred C-CHHHHH---HHHHCCCc
Confidence 8 775544 55555543
No 367
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=71.36 E-value=32 Score=30.96 Aligned_cols=85 Identities=8% Similarity=-0.050 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC------
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML------ 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~------ 116 (335)
+-+..+.+.+++.|..++... .|.+ .++.+.+.++|.+-+.+.+.. .+.++.+.+.+.|+++--...
T Consensus 80 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~ 158 (332)
T 2o20_A 80 AITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTIDGDKEIP 158 (332)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCCCTTSCSC
T ss_pred HHHHHHHHHHHHcCCEEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccccCCCCCC
Confidence 446677888999998776543 3432 245556678999988776543 577888888899987642211
Q ss_pred ---C-CHHHHHHHHHHHHh-cCC
Q psy17999 117 ---P-SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ---~-tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...|++++.+ |+.
T Consensus 159 ~V~~D~~~~~~~a~~~L~~~G~~ 181 (332)
T 2o20_A 159 SVNIDYHLAAYQSTKKLIDSGNK 181 (332)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCS
T ss_pred EEEeChHHHHHHHHHHHHHCCCC
Confidence 0 12334667777776 544
No 368
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=71.34 E-value=19 Score=32.61 Aligned_cols=73 Identities=7% Similarity=0.001 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCceEecc--CChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHH----hcCCcEEEeCCCCCCHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASA--MDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAA----SKQKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stp--fd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a----~~gkPvilStG~~~tl~Ei~~ 124 (335)
...|...++..+++++.-- .|+..++.+..+|+|.+-+....+. ..++++. ..|.-+++.+. +.+|...
T Consensus 95 ~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~--~~l~~l~~~a~~lGl~~lvev~---~~~E~~~ 169 (254)
T 1vc4_A 95 LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG--ELTGAYLEEARRLGLEALVEVH---TERELEI 169 (254)
T ss_dssp HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG--GGHHHHHHHHHHHTCEEEEEEC---SHHHHHH
T ss_pred HHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH--HHHHHHHHHHHHCCCeEEEEEC---CHHHHHH
Confidence 4456666668899855544 4555788888999999999988876 4454433 56888887776 7889887
Q ss_pred HHHH
Q psy17999 125 IYTT 128 (335)
Q Consensus 125 Av~~ 128 (335)
|.+.
T Consensus 170 a~~~ 173 (254)
T 1vc4_A 170 ALEA 173 (254)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7664
No 369
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=71.32 E-value=30 Score=25.99 Aligned_cols=77 Identities=5% Similarity=0.040 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhcC----CcEEEeCCCCCCHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASKQ----KPLIISTGMLPSIEH 121 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~g----kPvilStG~~~tl~E 121 (335)
......|.+..++.|..+.+..-..+.++.+.+..++++-+.. .+.+-+.+++++.+.. .|||+.++.. +. .
T Consensus 16 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~-~~-~ 93 (132)
T 3lte_A 16 QAMAAAIERVLKRDHWQVEIAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLD-KA-K 93 (132)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSC-SH-H
T ss_pred HHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCC-hH-H
Confidence 3445566777778898877655556667888888788876654 3567789999988643 5677777765 43 4
Q ss_pred HHHHH
Q psy17999 122 VDNIY 126 (335)
Q Consensus 122 i~~Av 126 (335)
+..++
T Consensus 94 ~~~~~ 98 (132)
T 3lte_A 94 LQQAV 98 (132)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 370
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=71.28 E-value=2.8 Score=39.35 Aligned_cols=52 Identities=29% Similarity=0.403 Sum_probs=40.3
Q ss_pred CCCCCeecCCCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 187 YPDIPIGYSGHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 187 fp~~pVG~SdHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
.|++|| |.. ...+++|+..||.|+=-|.--+ |...|++|+-++++++.||+.
T Consensus 26 ~P~lPv-----TpeEia~~A~~~~~AGAaivHlH~Rd~------~G~ps~d~~~~~e~~~~IR~~ 79 (284)
T 3chv_A 26 NPAVPI-----TVSEQVESTQEAFEAGAAIAHCHVRND------DGTPSSDPDRFARLTEGLHTH 79 (284)
T ss_dssp CTTCCC-----SHHHHHHHHHHHHHHTCCEEEECEECT------TSCEECCHHHHHHHHHHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHHHcCCcEEEeeecCC------CCCcCCCHHHHHHHHHHHHHh
Confidence 456666 333 4457889999999999997632 455789999999999999975
No 371
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=71.23 E-value=46 Score=31.04 Aligned_cols=152 Identities=15% Similarity=0.106 Sum_probs=95.6
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhH---HHHHhCCCCEEEEcCCC---CCCHHHHHH---HHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSF---DFLLSANVPFIKIGSGD---SNNIPLIKY---AAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~sv---d~l~~l~v~~~KIaS~d---~~n~~LL~~---~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-+ .+++ ..++++|+|.+-+-+.- .+.-.++++ +|+ +++
T Consensus 70 ~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 149 (315)
T 3si9_A 70 PTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISI 149 (315)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred cccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 458999999999888764 4677765543 2333 45567899998776543 233445544 444 699
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+|= ||..++.+.+.+..+. .+ +++-+-= ..-|+..+..
T Consensus 150 PiilYn~P~~tg~~l~~~~~~~La~~----~p-----------------------nIvgiKd--------ssgd~~~~~~ 194 (315)
T 3si9_A 150 PIIIYNIPSRSVIDMAVETMRDLCRD----FK-----------------------NIIGVKD--------ATGKIERASE 194 (315)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHH----CT-----------------------TEEEEEE--------CSCCTHHHHH
T ss_pred CEEEEeCchhhCCCCCHHHHHHHHhh----CC-----------------------CEEEEEe--------CCCCHHHHHH
Confidence 99996 7888888877765441 12 2322221 1246777777
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+++.++ ++.| ||+... ....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 195 l~~~~~~~f~v-~~G~d~---~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 244 (315)
T 3si9_A 195 QREKCGKDFVQ-LSGDDC---TALGFNAHGGVGCIS-------------VSSNVAPKLCAQLHAACL 244 (315)
T ss_dssp HHHHHCSSSEE-EESCGG---GHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHcCCCeEE-EecCHH---HHHHHHHcCCCEEEe-------------cHHHhhHHHHHHHHHHHH
Confidence 776663 4444 666432 34567889998 552 224466888888877654
No 372
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=71.11 E-value=21 Score=27.51 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=44.4
Q ss_pred CchHHHHHHH--HCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy17999 176 NLNVIHTLRS--RYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQ 251 (335)
Q Consensus 176 nL~~i~~L~~--~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~ 251 (335)
.+..+..||+ .+|++|| .++++.. ......|...||. +|.|-+ .++++|...++.+-+.+.
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~-~~~~~~~~~~ga~~~l~Kp~--------------~~~~~l~~~i~~~l~~~~ 130 (144)
T 3kht_A 66 GFEVMSAVRKPGANQHTPIVILTDNVS-DDRAKQCMAAGASSVVDKSS--------------NNVTDFYGRIYAIFSYWL 130 (144)
T ss_dssp HHHHHHHHHSSSTTTTCCEEEEETTCC-HHHHHHHHHTTCSEEEECCT--------------TSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEEeCCCC-HHHHHHHHHcCCCEEEECCC--------------CcHHHHHHHHHHHHHHHH
Confidence 4667888887 6778998 5666554 4556678899998 888743 136688888877766665
Q ss_pred HhC
Q psy17999 252 SLG 254 (335)
Q Consensus 252 alG 254 (335)
.-.
T Consensus 131 ~~~ 133 (144)
T 3kht_A 131 TVN 133 (144)
T ss_dssp HTS
T ss_pred hcc
Confidence 433
No 373
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=71.06 E-value=8.4 Score=39.04 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=44.5
Q ss_pred hhHHHHHhCCCCEEEEcCC------CCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 73 VSFDFLLSANVPFIKIGSG------DSNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~------d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+.+..++++|++.+-+-+. .=.|++|++++++. +.|||-|-|.+ +++++.++.+
T Consensus 456 e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIasGGi~-s~~d~~~~~~ 516 (555)
T 1jvn_A 456 ELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAG-VPEHFEEAFL 516 (555)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEECSCCC-SHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEEECCCC-CHHHHHHHHH
Confidence 4456777899999988553 23699999999874 89999999999 9999998866
No 374
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=70.68 E-value=31 Score=25.90 Aligned_cols=79 Identities=8% Similarity=0.172 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCC--ceEeccCChhhHHHHHh-------CCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEe
Q psy17999 48 QEEYVMLQQCADQVDI--MFTASAMDQVSFDFLLS-------ANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIIS 112 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi--~f~stpfd~~svd~l~~-------l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilS 112 (335)
......|.+..++.|. .+.+..-..+.++.+.+ ..++++-+.- .+++-+.+++.+.+. +.|||+-
T Consensus 12 ~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~l 91 (140)
T 1k68_A 12 KADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVL 91 (140)
T ss_dssp HHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEE
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEE
Confidence 3456677778888887 44433333455677765 5577777653 356778999999874 5799999
Q ss_pred CCCCCCHHHHHHHHH
Q psy17999 113 TGMLPSIEHVDNIYT 127 (335)
Q Consensus 113 tG~~~tl~Ei~~Av~ 127 (335)
|+.. +.+.+..+.+
T Consensus 92 s~~~-~~~~~~~~~~ 105 (140)
T 1k68_A 92 STSI-NEDDIFHSYD 105 (140)
T ss_dssp ESCC-CHHHHHHHHH
T ss_pred ecCC-cHHHHHHHHH
Confidence 9988 7777666543
No 375
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=70.66 E-value=20 Score=27.75 Aligned_cols=75 Identities=8% Similarity=0.057 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcEEEeCCCCCCHHHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS----KQKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPvilStG~~~tl~Ei~~A 125 (335)
..|.+..++.|..+....-..+.++.+.+..+|++-+.- .+.+-+.+++.+.+ .+.|||+-|+.. +.+.+..+
T Consensus 22 ~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~-~~~~~~~~ 100 (147)
T 2zay_A 22 AASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA-TAKEEAQL 100 (147)
T ss_dssp HHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSC-CHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCC-CHHHHHHH
Confidence 344555556687777544445566777776788877653 35677899999986 368999999988 77766665
Q ss_pred HH
Q psy17999 126 YT 127 (335)
Q Consensus 126 v~ 127 (335)
.+
T Consensus 101 ~~ 102 (147)
T 2zay_A 101 LD 102 (147)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 376
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.53 E-value=25 Score=32.28 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=21.2
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+.|||..+|.. +.+|..+-.+..+. |..
T Consensus 70 r~pviaGvg~~-~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 70 RIPIIAGTGAN-STREAIELTKAAKDLGAD 98 (291)
T ss_dssp SSCEEEECCCS-SHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEeCCCC-CHHHHHHHHHHHHhcCCC
Confidence 57999999987 77777776676666 544
No 377
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=70.41 E-value=14 Score=29.42 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=41.8
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC-CCCCHHHHHHHHhcCC-cEEEeC
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG-DSNNIPLIKYAASKQK-PLIIST 113 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~-d~~n~~LL~~~a~~gk-PvilSt 113 (335)
...+.+.+++.|+.+.....+.+.+..+-.. .|++-.+|. +-.-..++++++. |+ |||.++
T Consensus 44 ~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~-G~vPvi~~~ 106 (166)
T 3qhp_A 44 EKKIKLLAQKLGVKAEFGFVNSNELLEILKT-CTLYVHAANVESEAIACLEAISV-GIVPVIANS 106 (166)
T ss_dssp HHHHHHHHHHHTCEEECCCCCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHT-TCCEEEECC
T ss_pred HHHHHHHHHHcCCeEEEeecCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhc-CCCcEEeeC
Confidence 5678888889987555533344444333333 788888884 5667788888875 87 999944
No 378
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=70.41 E-value=50 Score=29.77 Aligned_cols=143 Identities=16% Similarity=0.232 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHcC--CceEe--ccCC-hhhHHH---HHhCCCCEEEEcCC---------CCCCHHHHHHHHhcCCcEEEe
Q psy17999 50 EYVMLQQCADQVD--IMFTA--SAMD-QVSFDF---LLSANVPFIKIGSG---------DSNNIPLIKYAASKQKPLIIS 112 (335)
Q Consensus 50 ~~~~L~~~~~~~G--i~f~s--tpfd-~~svd~---l~~l~v~~~KIaS~---------d~~n~~LL~~~a~~gkPvilS 112 (335)
...++.+.|+++. +..++ .|.+ ...++. +.+.|+..+++... +-.-.|+++.+++.|+||++=
T Consensus 78 ~N~~~~~~~~~~p~r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH 157 (291)
T 3irs_A 78 SNADVAAVAKAYPDKFHPVGSIEAATRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMM 157 (291)
T ss_dssp CHHHHHHHHHHSTTTEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEE
T ss_pred cHHHHHHHHHHCCCcEEEEEecCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEe
Confidence 4456667777764 33232 3445 333443 44578888998732 123478999999999999999
Q ss_pred CCCCC-------CHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHH
Q psy17999 113 TGMLP-------SIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRS 185 (335)
Q Consensus 113 tG~~~-------tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~ 185 (335)
+|.+. ...++.. ++++. ++ + ++++.||- +|- +..+..+..
T Consensus 158 ~~~~~~~~~~~~~p~~~~~---v~~~~-P~----------------l-----~ivl~H~G--~~~------~~~~~~l~~ 204 (291)
T 3irs_A 158 TGGNAGPDITYTNPEHIDR---VLGDF-PD----------------L-----TVVSSHGN--WPW------VQEIIHVAF 204 (291)
T ss_dssp CSSSCSSSGGGGCHHHHHH---HHHHC-TT----------------C-----CEEEEGGG--TTC------HHHHHHHHH
T ss_pred CCCCCCCCCccCCHHHHHH---HHHHC-CC----------------C-----EEEeecCC--ccc------HHHHHHHHh
Confidence 98641 2444443 33332 21 1 78999986 342 222233333
Q ss_pred HCCCCCeecCCCCC---ChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCC
Q psy17999 186 RYPDIPIGYSGHEN---GVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASS 233 (335)
Q Consensus 186 ~fp~~pVG~SdHt~---g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~S 233 (335)
++|++-+..|+-.. +...... +++ .+..||=+-|.|....
T Consensus 205 ~~~nvy~~~Sg~~~~~~~~~~~~~-------~~~-~~g~drllfgSD~P~~ 247 (291)
T 3irs_A 205 RRPNLYLSPDMYLYNLPGHADFIQ-------AAN-SFLADRMLFGTAYPMC 247 (291)
T ss_dssp HCTTEEEECGGGGSSSTTHHHHHH-------HHT-TGGGGTBCCCCCBTSS
T ss_pred HCCCeEecHHHHhccCCCHHHHHH-------HHH-HhCcceEEEecCCCCC
Confidence 56787777665321 2221111 122 3567888889998875
No 379
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=70.32 E-value=65 Score=29.40 Aligned_cols=147 Identities=12% Similarity=0.207 Sum_probs=89.6
Q ss_pred hcCCHHHHHHHHHHHHHc--CCceEeccCC-hhhH---HHHHhCCCCEEEEcCCCC----CCHHHHH---HHHh-cCCcE
Q psy17999 44 LEFSQEEYVMLQQCADQV--DIMFTASAMD-QVSF---DFLLSANVPFIKIGSGDS----NNIPLIK---YAAS-KQKPL 109 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~--Gi~f~stpfd-~~sv---d~l~~l~v~~~KIaS~d~----~n~~LL~---~~a~-~gkPv 109 (335)
..|+.++..++.+.+.+. |+.+-+.-.+ .+++ ..++++|+|.+-+-..-. +.-.+++ ++|+ +++||
T Consensus 46 ~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPi 125 (286)
T 2r91_A 46 PALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPV 125 (286)
T ss_dssp GGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCE
T ss_pred hhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 459999999999888764 3323233323 3333 445678999988866543 3344444 4554 68999
Q ss_pred EE-----eCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHH
Q psy17999 110 II-----STGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLR 184 (335)
Q Consensus 110 il-----StG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~ 184 (335)
|| -||..++.+.+.+ + + +++-+- ...-|+..+..++
T Consensus 126 ilYn~P~~tg~~l~~~~~~~----~----p-----------------------nivgiK--------ds~gd~~~~~~~~ 166 (286)
T 2r91_A 126 FLYNYPAAVGRDVDARAAKE----L----G-----------------------CIRGVK--------DTNESLAHTLAYK 166 (286)
T ss_dssp EEEECHHHHSSCCCHHHHHH----H----S-----------------------CEEEEE--------ECCSCHHHHHHHH
T ss_pred EEEeChhhcCCCCCHHHHHh----c----C-----------------------CEEEEE--------eCCCCHHHHHHHH
Confidence 99 4787778888876 2 2 222222 1124677777776
Q ss_pred HHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 185 SRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 185 ~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+ .+ +..| ||++.. ....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 167 ~-~~~~f~v-~~G~d~---~~~~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 213 (286)
T 2r91_A 167 R-YLPQARV-YNGSDS---LVFASFAVRLDGVVA-------------SSANYLPELLAGIRDAVA 213 (286)
T ss_dssp H-HCTTSEE-EECCGG---GHHHHHHTTCSEECC-------------GGGTTCHHHHHHHHHHHH
T ss_pred h-cCCCEEE-EEccHH---HHHHHHHcCCCEEEe-------------cHHHhCHHHHHHHHHHHH
Confidence 6 43 3444 776532 33467788987 332 234467888888876654
No 380
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=70.25 E-value=14 Score=29.01 Aligned_cols=82 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCCh
Q psy17999 122 VDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGV 201 (335)
Q Consensus 122 i~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~ 201 (335)
..+|++.+..... .+++++-..+ +.-.+..+..+++.+|++||.+-.-....
T Consensus 55 ~~~al~~l~~~~~--dlii~D~~l~--------------------------~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 106 (150)
T 4e7p_A 55 GQEAIQLLEKESV--DIAILDVEMP--------------------------VKTGLEVLEWIRSEKLETKVVVVTTFKRA 106 (150)
T ss_dssp HHHHHHHHTTSCC--SEEEECSSCS--------------------------SSCHHHHHHHHHHTTCSCEEEEEESCCCH
T ss_pred HHHHHHHhhccCC--CEEEEeCCCC--------------------------CCcHHHHHHHHHHhCCCCeEEEEeCCCCH
Q ss_pred HHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy17999 202 HVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGI 246 (335)
Q Consensus 202 ~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~i 246 (335)
.....|..+||. +|.|-++.+ +|...++.+
T Consensus 107 ~~~~~~~~~g~~~~l~Kp~~~~---------------~l~~~i~~~ 137 (150)
T 4e7p_A 107 GYFERAVKAGVDAYVLKERSIA---------------DLMQTLHTV 137 (150)
T ss_dssp HHHHHHHHTTCSEEEETTSCHH---------------HHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEecCCCHH---------------HHHHHHHHH
No 381
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=70.11 E-value=33 Score=30.17 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=36.1
Q ss_pred HHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCC
Q psy17999 98 LIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDIN 176 (335)
Q Consensus 98 LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~n 176 (335)
.++.+.+.|+||++=+|....-. ..++.+++ +... .++++.||..+ .+
T Consensus 143 ~~~~a~~~~~pv~iH~~~~~~~~---~~~~~l~~~~~~~---------------------~~~~i~H~~~~-------~~ 191 (291)
T 1bf6_A 143 AALAHNQTGRPISTHTSFSTMGL---EQLALLQAHGVDL---------------------SRVTVGHCDLK-------DN 191 (291)
T ss_dssp HHHHHHHHCCCEEEECGGGCSHH---HHHHHHHHTTCCG---------------------GGEEECCCCSS-------CC
T ss_pred HHHHHHHHCCeEEEeCCCCCChH---HHHHHHHHcCCCc---------------------hhEEEECCCCC-------CC
Confidence 34444567899998776220111 33455554 3210 16788898542 33
Q ss_pred chHHHHHHHHCCCCCeecCC
Q psy17999 177 LNVIHTLRSRYPDIPIGYSG 196 (335)
Q Consensus 177 L~~i~~L~~~fp~~pVG~Sd 196 (335)
+..+..+.++ ++.|+++.
T Consensus 192 ~~~~~~~~~~--G~~i~~~~ 209 (291)
T 1bf6_A 192 LDNILKMIDL--GAYVQFDT 209 (291)
T ss_dssp HHHHHHHHHT--TCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEcc
Confidence 4556666653 67777764
No 382
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=70.09 E-value=17 Score=36.51 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=66.2
Q ss_pred CHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEe--eecCCCCCC
Q psy17999 95 NIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSIL--HCVSAYPTP 171 (335)
Q Consensus 95 n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ll--HC~s~YP~~ 171 (335)
.+..|+++.+ +++||+++ |.. +.++...+++ .|- +.+.+ |.-+...
T Consensus 331 ~~~~i~~lr~~~~~PvivK-gv~-~~e~A~~a~~---aGa------------------------d~I~vs~hgG~~~d-- 379 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVIK-GVQ-RTEDVIKAAE---IGV------------------------SGVVLSNHGGRQLD-- 379 (511)
T ss_dssp CHHHHHHHHHHCSSCEEEE-EEC-SHHHHHHHHH---TTC------------------------SEEEECCTTTTSST--
T ss_pred HHHHHHHHHHHhCCcEEEE-eCC-CHHHHHHHHH---cCC------------------------CEEEEcCCCCccCC--
Confidence 4778888877 59999999 444 6655444332 243 22333 2211111
Q ss_pred ccCCCchHHHHHHHHC------CCCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHH
Q psy17999 172 YHDINLNVIHTLRSRY------PDIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALV 243 (335)
Q Consensus 172 ~~~~nL~~i~~L~~~f------p~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv 243 (335)
.....+..+..+++.. +++||.-++--....-...|+++||+.+- +-|-......|.+ . --+-+..+.
T Consensus 380 ~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~---g-v~~~l~~l~ 455 (511)
T 1kbi_A 380 FSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRN---G-VEKAIEILR 455 (511)
T ss_dssp TCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHH---H-HHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChH---H-HHHHHHHHH
Confidence 0123466777777654 36888555444444445568889998432 2111100000100 0 012455666
Q ss_pred HHHHHHHHHhCC
Q psy17999 244 TGIRDIEQSLGS 255 (335)
Q Consensus 244 ~~ir~~~~alG~ 255 (335)
+.++..-..+|.
T Consensus 456 ~el~~~m~~~G~ 467 (511)
T 1kbi_A 456 DEIEMSMRLLGV 467 (511)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhCC
Confidence 777777777775
No 383
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=69.91 E-value=30 Score=26.51 Aligned_cols=61 Identities=15% Similarity=0.318 Sum_probs=43.6
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDIEQS 252 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~~~a 252 (335)
.+..+..|++.+|++|| .++++.. ......|...||. +|.|-+ ++++|...++.+-.-...
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~kp~---------------~~~~l~~~l~~~~~~~~~ 126 (143)
T 3jte_A 64 GMDILREIKKITPHMAVIILTGHGD-LDNAILAMKEGAFEYLRKPV---------------TAQDLSIAINNAINRKKL 126 (143)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTTC-HHHHHHHHHTTCSEEEESSC---------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC-HHHHHHHHHhCcceeEeCCC---------------CHHHHHHHHHHHHHHHHH
Confidence 46778889999988998 5677654 4555678899998 888743 466888777766554443
No 384
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=69.91 E-value=21 Score=32.90 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChh-------h---HHHHHhCCCCEEEEcCCCCC---CHHHHHHHHh-----cCC
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQV-------S---FDFLLSANVPFIKIGSGDSN---NIPLIKYAAS-----KQK 107 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~-------s---vd~l~~l~v~~~KIaS~d~~---n~~LL~~~a~-----~gk 107 (335)
++.+...+|.+.+++.|..++.|-.|.+ - ++.+.++|+|++||+-.--+ |+.|++...+ .++
T Consensus 143 ~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~ 222 (276)
T 3o1n_A 143 TGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADR 222 (276)
T ss_dssp GCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCS
T ss_pred CCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHHHHHhcCCCC
Confidence 3567889999999999999999766432 2 23445679999999876553 5666665443 467
Q ss_pred cEE-EeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHH
Q psy17999 108 PLI-ISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLR 184 (335)
Q Consensus 108 Pvi-lStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~ 184 (335)
|+| ++.|- +.-+-+.+.-+- |. .+-||.-.=|+.+.++.+..|..+-
T Consensus 223 PlIa~~MG~---~G~~SRi~~~~~-GS--------------------------~vTf~~l~~~sAPGQl~~~~l~~~l 270 (276)
T 3o1n_A 223 PIITMSMSK---TGVISRLAGEVF-GS--------------------------AATFGAVKKASAPGAISVADLRTVL 270 (276)
T ss_dssp CCEEEECSG---GGTHHHHCHHHH-TC--------------------------CEEECBSSCCSSTTCCBHHHHHHHH
T ss_pred CEEEEECCC---chhhHHHHHHHh-CC--------------------------ceEecCCCCCCCCCCCCHHHHHHHH
Confidence 855 45552 222332222111 21 2345555556667788887766554
No 385
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=69.88 E-value=38 Score=30.14 Aligned_cols=127 Identities=9% Similarity=0.121 Sum_probs=83.6
Q ss_pred HHHHHHHHHHcCCceEeccCChhh----HHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHH
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVS----FDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~s----vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av 126 (335)
...+.+..++.+|..+....+.+. ++.+.+.|++++++.-.+..-..+++++++.-..+++..|.-.+.++++.|+
T Consensus 16 ~~~~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~ 95 (225)
T 1mxs_A 16 AARIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVE 95 (225)
T ss_dssp HHHHHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHH
Confidence 445566677889888887767663 4566677999999997777667788887776556777666445788888876
Q ss_pred HHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHH
Q psy17999 127 TTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYA 206 (335)
Q Consensus 127 ~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~a 206 (335)
+. |. +++ |. | ..|+..+..- +.+ +.++.-.-||. .-...
T Consensus 96 ~a---GA------------------------d~v--~~------p--~~d~~v~~~~-~~~-g~~~i~G~~t~--~e~~~ 134 (225)
T 1mxs_A 96 AA---GA------------------------QFV--VT------P--GITEDILEAG-VDS-EIPLLPGISTP--SEIMM 134 (225)
T ss_dssp HH---TC------------------------SSE--EC------S--SCCHHHHHHH-HHC-SSCEECEECSH--HHHHH
T ss_pred HC---CC------------------------CEE--Ee------C--CCCHHHHHHH-HHh-CCCEEEeeCCH--HHHHH
Confidence 64 43 222 21 1 2455555544 457 66652213443 34567
Q ss_pred HHHcCCcEEEec
Q psy17999 207 AVAMGAQIIEKH 218 (335)
Q Consensus 207 AvalGA~vIEkH 218 (335)
|..+||+.|=-|
T Consensus 135 A~~~Gad~vk~F 146 (225)
T 1mxs_A 135 GYALGYRRFKLF 146 (225)
T ss_dssp HHTTTCCEEEET
T ss_pred HHHCCCCEEEEc
Confidence 889999977653
No 386
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=69.69 E-value=12 Score=34.81 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=54.3
Q ss_pred cCCHHHHHHHHHHHHHc------CCceEe--cc-CChhh----HHHHHhCCCCEEEEcCCCC------------------
Q psy17999 45 EFSQEEYVMLQQCADQV------DIMFTA--SA-MDQVS----FDFLLSANVPFIKIGSGDS------------------ 93 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~------Gi~f~s--tp-fd~~s----vd~l~~l~v~~~KIaS~d~------------------ 93 (335)
++..+.+..+++.+.+. +++++. ++ ++.+. +..+++.|+|++.+..+..
T Consensus 188 ~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~ 267 (336)
T 1f76_A 188 EALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLS 267 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEE
T ss_pred HHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcC
Confidence 34456666666666433 566643 23 44333 5778889999999875421
Q ss_pred ------CCHHHHHHHHh-c--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 94 ------NNIPLIKYAAS-K--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 94 ------~n~~LL~~~a~-~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
..+.+++++.+ . +.|||.+-|.. |.+++.+++.
T Consensus 268 g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~-~~~da~~~l~ 309 (336)
T 1f76_A 268 GRPLQLKSTEIIRRLSLELNGRLPIIGVGGID-SVIAAREKIA 309 (336)
T ss_dssp EGGGHHHHHHHHHHHHHHHTTSSCEEEESSCC-SHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCEEEECCCC-CHHHHHHHHH
Confidence 12366677765 3 79999999999 9988888765
No 387
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=69.63 E-value=23 Score=32.91 Aligned_cols=59 Identities=8% Similarity=0.129 Sum_probs=35.5
Q ss_pred HHHHHhCCCCEEEEcCC--C---CCCH---HHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG--D---SNNI---PLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~--d---~~n~---~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ + ++.- .+++.+.+ -+.|||..+|.. +.+|..+-.+..+. |..
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTY-DTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-CHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC-CHHHHHHHHHHHHHcCCC
Confidence 44555666776555322 1 2221 34444433 357999999988 78887777777766 654
No 388
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=69.62 E-value=13 Score=32.52 Aligned_cols=69 Identities=13% Similarity=0.033 Sum_probs=50.0
Q ss_pred cCCHHHHHHHHHHHHHcCCceEeccCC--------hhhHHHHHhCCCCEEEEcCCCCCCHH-HHHHHHhcCCcEEEeCC
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTASAMD--------QVSFDFLLSANVPFIKIGSGDSNNIP-LIKYAASKQKPLIISTG 114 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~stpfd--------~~svd~l~~l~v~~~KIaS~d~~n~~-LL~~~a~~gkPvilStG 114 (335)
.++.++..++++.++++||.+.+.... .+.++++.++|++.+.+..+. .++. +.+.+.+.|..+.+-+.
T Consensus 57 ~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~~-~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 57 NSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNY-ELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEECG-GGHHHHHHHHHHHTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCCH-HHHHHHHHHHHHcCCEEEEecC
Confidence 457788999999999999998754321 234677788999999987552 3333 33444456999999877
No 389
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=69.42 E-value=34 Score=30.06 Aligned_cols=160 Identities=9% Similarity=0.061 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHH--cCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 46 FSQEEYVMLQQCADQ--VDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 46 l~~e~~~~L~~~~~~--~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
.+.++.++|.+.... .-+.++...-..+-++.+.+++.|++++...+ ....++++. .+.|||-.-.+. +..++
T Consensus 37 V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e--~~~~~~~l~-~~~~vika~~v~-~~~~l- 111 (203)
T 1v5x_A 37 IAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE--PPEWAEAVG-RFYPVIKAFPLE-GPARP- 111 (203)
T ss_dssp CCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSCC--CHHHHHHHT-TTSCEEEEEECS-SSCCG-
T ss_pred CCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC--CHHHHHHhc-cCCCEEEEEEcC-ChHhh-
Confidence 455666666554331 12223333333333566677899999999765 567888873 368999666555 33232
Q ss_pred HHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHH
Q psy17999 124 NIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHV 203 (335)
Q Consensus 124 ~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~ 203 (335)
.+ ..... +..|+-..+ +-.-...||..+..+. .. ..|+..++--...-+
T Consensus 112 ~~----~~~~~-----------------------d~~LlD~~~--gGtG~~fdW~~l~~~~-~~-~~p~~LAGGL~peNV 160 (203)
T 1v5x_A 112 EW----ADYPA-----------------------QALLLDGKR--PGSGEAYPRAWAKPLL-AT-GRRVILAGGIAPENL 160 (203)
T ss_dssp GG----GGSSC-----------------------SEEEEECSS--TTSCCCCCGGGGHHHH-HT-TSCEEECSSCCSTTH
T ss_pred hh----hhcCC-----------------------CEEEEcCCC--CCCCCccCHHHHHhhh-cc-CCcEEEECCCCHHHH
Confidence 21 11111 344444322 2223568888777622 23 578877754333233
Q ss_pred HHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 204 CYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 204 ~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
..|. .+++.-|--.=-... .+| --+++.++++++.+|.
T Consensus 161 ~~ai-~~~p~gVDvsSGvE~-~pG-----~KD~~ki~~fi~~~r~ 198 (203)
T 1v5x_A 161 EEVL-ALRPYALDLASGVEE-APG-----VKSAEKLRALFARLAS 198 (203)
T ss_dssp HHHH-HHCCSEEEESGGGEE-ETT-----EECHHHHHHHHHHHHH
T ss_pred HHHH-hcCCCEEEeCCceec-CCC-----CcCHHHHHHHHHHHHH
Confidence 3332 445543321111110 012 1368899999998885
No 390
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=69.42 E-value=35 Score=25.99 Aligned_cols=79 Identities=14% Similarity=0.254 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHHcCC--ceEeccCChhhHHHHHh----------CCCCEEEEcC--CCCCCHHHHHHHHhc----CCc
Q psy17999 47 SQEEYVMLQQCADQVDI--MFTASAMDQVSFDFLLS----------ANVPFIKIGS--GDSNNIPLIKYAASK----QKP 108 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi--~f~stpfd~~svd~l~~----------l~v~~~KIaS--~d~~n~~LL~~~a~~----gkP 108 (335)
.......|.+..++.|. .+....-..+.++.+.+ ..++++-+.- .+++-+.+++.+.+. ..|
T Consensus 15 ~~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ 94 (149)
T 1k66_A 15 SDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIP 94 (149)
T ss_dssp CHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSC
T ss_pred CHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCe
Confidence 34455667777788887 44444444556777775 5577776653 356778999999873 579
Q ss_pred EEEeCCCCCCHHHHHHHH
Q psy17999 109 LIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 109 vilStG~~~tl~Ei~~Av 126 (335)
||+-|+.. +.+.+..+.
T Consensus 95 ii~~t~~~-~~~~~~~~~ 111 (149)
T 1k66_A 95 VVIMTTSS-NPKDIEICY 111 (149)
T ss_dssp EEEEESCC-CHHHHHHHH
T ss_pred EEEEeCCC-CHHHHHHHH
Confidence 99999988 777666654
No 391
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=69.37 E-value=23 Score=35.06 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=72.1
Q ss_pred cCCc-EEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCC--------------CC
Q psy17999 105 KQKP-LIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSA--------------YP 169 (335)
Q Consensus 105 ~gkP-vilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~--------------YP 169 (335)
..+| |+++.....+.+++...++.+.+.+. +.+++|.++. |-
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGa-----------------------DgI~v~ntt~~~~d~~~~~~~~GGlS 351 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNI-----------------------DGMIISNTTTQINDIKSFENKKGGVS 351 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTC-----------------------SEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCC-----------------------CEEEEECCCcccccccccccccCCcC
Confidence 4689 99997755577888888888776323 3444443322 00
Q ss_pred C-CccCCCchHHHHHHHHCC-CCCeecCCCCCChHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 170 T-PYHDINLNVIHTLRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 170 ~-~~~~~nL~~i~~L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
- +.....+..+..+++..+ ++||.-++=-....-+..++++||+.+-- -+.+- .-.|.-++++.+.++
T Consensus 352 G~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqi----grall------~~gP~l~~~i~~~l~ 421 (443)
T 1tv5_A 352 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL----YSCLV------FNGMKSAVQIKRELN 421 (443)
T ss_dssp EHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEE----SHHHH------HHGGGHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE----cHHHH------hcChHHHHHHHHHHH
Confidence 0 001124678888988874 68985444444466667788899997762 12200 003557788888887
Q ss_pred HHHHHhCC
Q psy17999 248 DIEQSLGS 255 (335)
Q Consensus 248 ~~~~alG~ 255 (335)
..-...|-
T Consensus 422 ~~l~~~G~ 429 (443)
T 1tv5_A 422 HLLYQRGY 429 (443)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCC
Confidence 76666663
No 392
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=69.29 E-value=23 Score=31.99 Aligned_cols=118 Identities=12% Similarity=0.030 Sum_probs=67.2
Q ss_pred HHHHHHHHHHcC--CceEe--ccC-ChhhHHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHhcCCcEEEeCCCCC
Q psy17999 51 YVMLQQCADQVD--IMFTA--SAM-DQVSFDFLLSANVPFIKIGSG-----DSNN---IPLIKYAASKQKPLIISTGMLP 117 (335)
Q Consensus 51 ~~~L~~~~~~~G--i~f~s--tpf-d~~svd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~~gkPvilStG~~~ 117 (335)
-..+.+.++++. +..++ .|. ..+.++.+.+.|+..+++... +++. .++++.+++.|+||+|=++.+
T Consensus 82 n~~~~~~~~~~p~r~~g~~~v~P~~~~~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~- 160 (294)
T 4i6k_A 82 NQAMLNAIQQYPDRLKGIAVVQHTTTFNELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPPK- 160 (294)
T ss_dssp CHHHHHHHHHSTTTEEEEECCCTTCCHHHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHH-
T ss_pred hHHHHHHHHHCCCeEEEEEEeCCcccHHHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcc-
Confidence 345667677763 22222 232 234455666678888887643 2332 567888889999999999876
Q ss_pred CHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCc-cCCCchHHHHHHHHCCCCCeecCC
Q psy17999 118 SIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPY-HDINLNVIHTLRSRYPDIPIGYSG 196 (335)
Q Consensus 118 tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~-~~~nL~~i~~L~~~fp~~pVG~Sd 196 (335)
.+.++. +.+++..- ++++-||....+... .......+..|.+ .||+-+.+|+
T Consensus 161 ~l~~~~---~~l~~~p~-----------------------~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~-~~nv~~k~Sg 213 (294)
T 4i6k_A 161 YLVQLL---PQLNEYSF-----------------------DVVIDHFGRVDPVKGIEDPDYQKFLSLLN-VKQHWIKVSG 213 (294)
T ss_dssp HHHHHH---HHHTTSSS-----------------------CEEESGGGCCCTTTCTTCHHHHHHHHHCC-TTTEEEECCC
T ss_pred hHHHHH---HHHHHCCC-----------------------CEEEECCCCCCCCCCCCCHHHHHHHHHHh-CCCEEEEecc
Confidence 545443 44443112 677777765443211 1112344444432 4677777775
No 393
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=69.20 E-value=11 Score=34.52 Aligned_cols=90 Identities=7% Similarity=0.068 Sum_probs=57.9
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCc-eEEeeecCCCCCCccCC--C----ch
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSN-LSILHCVSAYPTPYHDI--N----LN 178 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~-l~llHC~s~YP~~~~~~--n----L~ 178 (335)
++|++++-+.. +.+++.++++.+..... + .+-+|+.+........+ + ..
T Consensus 93 ~~p~~~~i~g~-~~~~~~~~a~~~~~~g~-----------------------d~~iein~~~P~~~g~~~~g~~~e~~~~ 148 (311)
T 1jub_A 93 EGPIFFSIAGM-SAAENIAMLKKIQESDF-----------------------SGITELNLSCPNVPGEPQLAYDFEATEK 148 (311)
T ss_dssp SSCCEEEECCS-SHHHHHHHHHHHHHSCC-----------------------CSEEEEESCCCCSSSCCCGGGCHHHHHH
T ss_pred CCCEEEEcCCC-CHHHHHHHHHHHHhcCC-----------------------CeEEEEeccCCCCCCcccccCCHHHHHH
Confidence 79999999988 99999999999886323 5 66677654332111111 1 35
Q ss_pred HHHHHHHHCCCCCeec---CCCCCC--hHHHHHHHHcCCcEEEeccC
Q psy17999 179 VIHTLRSRYPDIPIGY---SGHENG--VHVCYAAVAMGAQIIEKHFT 220 (335)
Q Consensus 179 ~i~~L~~~fp~~pVG~---SdHt~g--~~~~~aAvalGA~vIEkH~t 220 (335)
.+..+|+.. ++||.. ++-+.. ...+..+...|++.|--|-+
T Consensus 149 iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 149 LLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp HHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred HHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCC
Confidence 567777776 788853 332211 23356677789998776654
No 394
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=69.06 E-value=80 Score=29.97 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=76.1
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCC----------CCC-----------------H
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGD----------SNN-----------------I 96 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d----------~~n-----------------~ 96 (335)
-+|+.++...+.+.-. +++..+.+.|.|.+.|..+. .+| .
T Consensus 149 ~~mt~~eI~~~i~~f~-------------~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~ 215 (365)
T 2gou_A 149 RAMTKADIAQVIADYR-------------QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLD 215 (365)
T ss_dssp EECCHHHHHHHHHHHH-------------HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHH
T ss_pred CcCCHHHHHHHHHHHH-------------HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHH
Confidence 3688888777654321 34556677889999985432 111 1
Q ss_pred HHHHHHHh-cCC-cEEEeCCC---------CCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeec
Q psy17999 97 PLIKYAAS-KQK-PLIISTGM---------LPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCV 165 (335)
Q Consensus 97 ~LL~~~a~-~gk-PvilStG~---------~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~ 165 (335)
.+++++.+ .|. ||.+.... ..++++....++.+...+. +..-+|..
T Consensus 216 eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~-----------------------d~i~v~~~ 272 (365)
T 2gou_A 216 EVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRI-----------------------VYLHIAEV 272 (365)
T ss_dssp HHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTC-----------------------SEEEEECC
T ss_pred HHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCC-----------------------CEEEEeCC
Confidence 33555543 232 99993221 1156666666666665222 33333332
Q ss_pred CCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcC-CcEEE
Q psy17999 166 SAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 166 s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalG-A~vIE 216 (335)
+ |... ...++..+..+|+.+ ++||.-.+-- ....+..++..| |+.|-
T Consensus 273 ~-~~~~-~~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 273 D-WDDA-PDTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp B-TTBC-CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred C-cCCC-CCccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHHHCCCcceeh
Confidence 1 2111 124567788999999 8998544333 466677788888 88765
No 395
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=68.99 E-value=3.8 Score=38.19 Aligned_cols=43 Identities=28% Similarity=0.438 Sum_probs=35.8
Q ss_pred hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 201 VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 201 ~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
...+++|...||.++=-|.--+ |...|++|+-|+++++.||+.
T Consensus 33 a~~A~~~~~AGAaivHlHvRd~------~G~~s~d~~~~~e~~~~IR~~ 75 (275)
T 3no5_A 33 VESTQAAFEAGATLVHLHVRND------DETPTSNPDRFALVLEGIRKH 75 (275)
T ss_dssp HHHHHHHHHHTCCEEEECEECT------TSCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCcEEEEeecCC------CCCcCCCHHHHHHHHHHHHHh
Confidence 4457889999999999997643 556789999999999999985
No 396
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.99 E-value=35 Score=31.57 Aligned_cols=72 Identities=8% Similarity=0.155 Sum_probs=43.8
Q ss_pred CC-ceEeccCChh----------hHHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCH
Q psy17999 62 DI-MFTASAMDQV----------SFDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSI 119 (335)
Q Consensus 62 Gi-~f~stpfd~~----------svd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl 119 (335)
|+ ..+.|||+.+ -++++.+.|++.+-+..+ .++. ..+++.+.+ -..|||..+|.. +.
T Consensus 19 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-st 97 (304)
T 3cpr_A 19 TVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTN-NT 97 (304)
T ss_dssp SEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-CH
T ss_pred ceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCC-CH
Confidence 44 4556777642 255666677887766432 2222 234444443 358999999987 77
Q ss_pred HHHHHHHHHHHh-cCC
Q psy17999 120 EHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 120 ~Ei~~Av~~i~~-g~~ 134 (335)
+|..+-.+..++ |..
T Consensus 98 ~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 98 RTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhcCCC
Confidence 777766666666 544
No 397
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=68.97 E-value=25 Score=32.84 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=58.3
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC------------CCCCHHHHHHH---Hh-cCCcEEEe--CC
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG------------DSNNIPLIKYA---AS-KQKPLIIS--TG 114 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~------------d~~n~~LL~~~---a~-~gkPvilS--tG 114 (335)
.|++.-++.+..++.++||.-++..+++.|++++-++|. .++--.++..+ ++ +++|||.. ||
T Consensus 10 ~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 89 (295)
T 1s2w_A 10 QLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTG 89 (295)
T ss_dssp HHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSS
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCC
Confidence 455555667899999999999999999999999999974 23333444443 33 58998887 88
Q ss_pred CCCCHHHHHHHHHHHHh-cCC
Q psy17999 115 MLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 115 ~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
-+ +.+++.+.+..+.+ |-.
T Consensus 90 yg-~~~~v~~~v~~l~~aGaa 109 (295)
T 1s2w_A 90 YG-NFNNARRLVRKLEDRGVA 109 (295)
T ss_dssp CS-SHHHHHHHHHHHHHTTCC
T ss_pred CC-CHHHHHHHHHHHHHcCCc
Confidence 55 77777777776666 543
No 398
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=68.95 E-value=1.1e+02 Score=31.53 Aligned_cols=149 Identities=8% Similarity=0.009 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHcCCceEeccCC---------------------------------------------hhhHHHHHhCCC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD---------------------------------------------QVSFDFLLSANV 83 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd---------------------------------------------~~svd~l~~l~v 83 (335)
+.|+++.+.+++.|-.++.-.|. .+++..+.+.|+
T Consensus 84 ~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGf 163 (729)
T 1o94_A 84 RNLKAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGF 163 (729)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46889999999999877755543 133455667899
Q ss_pred CEEEEcCCC----------CCC-----------------HHHHHHHHh-c--CCcEEEeC--------CCCCC-HHHHHH
Q psy17999 84 PFIKIGSGD----------SNN-----------------IPLIKYAAS-K--QKPLIIST--------GMLPS-IEHVDN 124 (335)
Q Consensus 84 ~~~KIaS~d----------~~n-----------------~~LL~~~a~-~--gkPvilSt--------G~~~t-l~Ei~~ 124 (335)
|.+.|..+. .+| .++++++.+ . +.||.+.. |+. + .+|...
T Consensus 164 DgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~-~~~~~~~~ 242 (729)
T 1o94_A 164 DIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQI-EAEVDGQK 242 (729)
T ss_dssp SEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSC-CTTTHHHH
T ss_pred CEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCC-CchHHHHH
Confidence 999997655 222 223444433 2 68998865 223 4 566666
Q ss_pred HHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCC--CccCCCchHHHHHHHHCCCCCeecCCCCCChH
Q psy17999 125 IYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPT--PYHDINLNVIHTLRSRYPDIPIGYSGHENGVH 202 (335)
Q Consensus 125 Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~--~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~ 202 (335)
.+..+..+ . ..+.+..|.... .+ ...-|. .....++..+..+|+.+ ++||.-.+--....
T Consensus 243 ~~~~l~~~-~--d~~~v~~g~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~i~~~~-~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 243 FVEMADSL-V--DMWDITIGDIAE-------------WG-EDAGPSRFYQQGHTIPWVKLVKQVS-KKPVLGVGRYTDPE 304 (729)
T ss_dssp HHHHHGGG-C--SEEEEEECCSTT-------------GG-GTSCCTTTCCTTTTHHHHHHHHTTC-SSCEECCSCCCCHH
T ss_pred HHHHHHhh-c--CEEEEeeecccc-------------cc-cccCCccccCccccHHHHHHHHHHC-CCEEEEeCCCCCHH
Confidence 66666543 2 111111111000 00 000111 11334788889999998 89997665555566
Q ss_pred HHHHHHHcC-CcEEE
Q psy17999 203 VCYAAVAMG-AQIIE 216 (335)
Q Consensus 203 ~~~aAvalG-A~vIE 216 (335)
.+..+++-| |++|-
T Consensus 305 ~a~~~l~~g~aD~V~ 319 (729)
T 1o94_A 305 KMIEIVTKGYADIIG 319 (729)
T ss_dssp HHHHHHHTTSCSBEE
T ss_pred HHHHHHHCCCCCEEE
Confidence 777788887 77443
No 399
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=68.92 E-value=17 Score=27.62 Aligned_cols=43 Identities=23% Similarity=0.204 Sum_probs=30.0
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEecc
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHF 219 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~ 219 (335)
.+..+..+|+.+|+.|| .+|++.... ....|...||. +|-|-+
T Consensus 61 g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~kp~ 105 (134)
T 3f6c_A 61 GIQVLETLRKRQYSGIIIIVSAKNDHF-YGKHCADAGANGFVSKKE 105 (134)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECC---C-THHHHHHTTCSEEEEGGG
T ss_pred hHHHHHHHHhcCCCCeEEEEeCCCChH-HHHHHHHhCCCEEEeCCC
Confidence 46778899999988988 567766543 34567899998 888743
No 400
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=68.79 E-value=3.4 Score=36.91 Aligned_cols=77 Identities=6% Similarity=-0.061 Sum_probs=54.1
Q ss_pred hcCCHHHHHHHHHHHH-HcCCceEeccCCh-hhHHHHHhCCCCEEEEcCC--CC-CCHHHHHHHHhcCCcEEEeCCCCCC
Q psy17999 44 LEFSQEEYVMLQQCAD-QVDIMFTASAMDQ-VSFDFLLSANVPFIKIGSG--DS-NNIPLIKYAASKQKPLIISTGMLPS 118 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~-~~Gi~f~stpfd~-~svd~l~~l~v~~~KIaS~--d~-~n~~LL~~~a~~gkPvilStG~~~t 118 (335)
+.+..+..+.|++.++ .+++.++. .|+ .-++.+.+.|+|.+=++-. .. .-..+++++-+.|+-+.++..++ |
T Consensus 47 ~~~g~~~v~~lr~~~~~~~~vhlmv--~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~-t 123 (230)
T 1tqj_A 47 ITIGPLIVDAIRPLTKKTLDVHLMI--VEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPS-T 123 (230)
T ss_dssp BCBCHHHHHHHGGGCCSEEEEEEES--SSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTT-C
T ss_pred hhhhHHHHHHHHhhcCCcEEEEEEc--cCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCC-C
Confidence 4456677888887774 45555666 454 3478888899999987765 22 34467788888899999999877 6
Q ss_pred HHHHH
Q psy17999 119 IEHVD 123 (335)
Q Consensus 119 l~Ei~ 123 (335)
..|..
T Consensus 124 ~~e~~ 128 (230)
T 1tqj_A 124 PLDFL 128 (230)
T ss_dssp CGGGG
T ss_pred cHHHH
Confidence 65543
No 401
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=68.70 E-value=28 Score=34.95 Aligned_cols=79 Identities=6% Similarity=0.024 Sum_probs=55.8
Q ss_pred cCCHHHHHHHHHHHHHcCCceEec-cCChhhHHHHHhCCCCEEEEcCC---C----CCCHHHHHHHHhc--------CCc
Q psy17999 45 EFSQEEYVMLQQCADQVDIMFTAS-AMDQVSFDFLLSANVPFIKIGSG---D----SNNIPLIKYAASK--------QKP 108 (335)
Q Consensus 45 el~~e~~~~L~~~~~~~Gi~f~st-pfd~~svd~l~~l~v~~~KIaS~---d----~~n~~LL~~~a~~--------gkP 108 (335)
.++++.+++| .+..+++++.- +-+.+.+..+.+.|+|+|-|+.. . ...+.+|..+.+. +.|
T Consensus 329 ~~~~~~i~~l---r~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ip 405 (511)
T 1kbi_A 329 SLTWKDIEEL---KKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLE 405 (511)
T ss_dssp TCCHHHHHHH---HHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBE
T ss_pred HhHHHHHHHH---HHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcE
Confidence 3555554444 44567876653 45578889999999999999422 1 1235666665542 689
Q ss_pred EEEeCCCCCCHHHHHHHHH
Q psy17999 109 LIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 109 vilStG~~~tl~Ei~~Av~ 127 (335)
||.+-|.. +-.++.+|+.
T Consensus 406 Via~GGI~-~g~Dv~kaLa 423 (511)
T 1kbi_A 406 VFVDGGVR-RGTDVLKALC 423 (511)
T ss_dssp EEEESSCC-SHHHHHHHHH
T ss_pred EEEECCCC-CHHHHHHHHH
Confidence 99999999 9999999876
No 402
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=68.68 E-value=33 Score=26.70 Aligned_cols=80 Identities=11% Similarity=0.261 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHcCC--ceEeccCChhhHHHHH---------hCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcE
Q psy17999 47 SQEEYVMLQQCADQVDI--MFTASAMDQVSFDFLL---------SANVPFIKIGS--GDSNNIPLIKYAAS----KQKPL 109 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi--~f~stpfd~~svd~l~---------~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPv 109 (335)
.......|.+..++.|. .+.+..-..+.++.+. +..+|++-+.- .+++-+.+++++.+ .+.||
T Consensus 13 d~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pi 92 (152)
T 3heb_A 13 DLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPV 92 (152)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCE
T ss_pred CHHHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCE
Confidence 34556677788888888 5555444556667774 34466666653 46777899999987 36799
Q ss_pred EEeCCCCCCHHHHHHHHH
Q psy17999 110 IISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 110 ilStG~~~tl~Ei~~Av~ 127 (335)
|+-|+.. +.+.+..+.+
T Consensus 93 i~~t~~~-~~~~~~~~~~ 109 (152)
T 3heb_A 93 VILTTTD-DQREIQRCYD 109 (152)
T ss_dssp EEEESCC-CHHHHHHHHH
T ss_pred EEEecCC-CHHHHHHHHH
Confidence 9999988 8777766543
No 403
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=68.67 E-value=27 Score=32.53 Aligned_cols=81 Identities=17% Similarity=0.053 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC------------CCCCHHHHHH---HHh-cCCcEEEe--CC
Q psy17999 53 MLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG------------DSNNIPLIKY---AAS-KQKPLIIS--TG 114 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~------------d~~n~~LL~~---~a~-~gkPvilS--tG 114 (335)
.|.+.-++.+..++.++||.-++..+++.|++++-++|. .++--.++.. +++ +++|||.. +|
T Consensus 6 ~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 6 ALRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp HHHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTT
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 455555677899999999999999999999999999973 2333344444 333 58998875 88
Q ss_pred CCCCHHHHHHHHHHHHh-cCC
Q psy17999 115 MLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 115 ~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
-+ +.+++.+.+..+.+ |-.
T Consensus 86 yg-~~~~~~~~v~~l~~aGa~ 105 (290)
T 2hjp_A 86 FG-NAVNVHYVVPQYEAAGAS 105 (290)
T ss_dssp TS-SHHHHHHHHHHHHHHTCS
T ss_pred CC-CHHHHHHHHHHHHHhCCe
Confidence 66 88888887777666 643
No 404
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=68.64 E-value=10 Score=34.17 Aligned_cols=81 Identities=14% Similarity=0.186 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcCCceEeccC--Chhh----HHHHHhCCCCEEEEcCCCC-----------C-----CHHHHHHH---
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAM--DQVS----FDFLLSANVPFIKIGSGDS-----------N-----NIPLIKYA--- 102 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpf--d~~s----vd~l~~l~v~~~KIaS~d~-----------~-----n~~LL~~~--- 102 (335)
.+++..+.+.|+..+++++...- +.+. .+...++|+||+|...+-. . +..++++.
T Consensus 101 ~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~ 180 (226)
T 1vcv_A 101 RRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE 180 (226)
T ss_dssp HHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 36788888888877888555332 2222 3455578999999986654 3 67777776
Q ss_pred HhcCCcEEEeCCCCCCHHHHHHHHHHH
Q psy17999 103 ASKQKPLIISTGMLPSIEHVDNIYTTV 129 (335)
Q Consensus 103 a~~gkPvilStG~~~tl~Ei~~Av~~i 129 (335)
.....||-.|=|.. |.++...-++..
T Consensus 181 ~g~~v~vKaaGGir-t~~~al~~i~a~ 206 (226)
T 1vcv_A 181 KGYRLGVKMAGGIR-TREQAKAIVDAI 206 (226)
T ss_dssp HTCCCEEEEESSCC-SHHHHHHHHHHH
T ss_pred hCCCceEEEeCCCC-CHHHHHHHHHHH
Confidence 44458999999999 876666555543
No 405
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=68.54 E-value=23 Score=33.17 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHHHHhCCCCEEEEcCC--C---CCCH---HHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG--D---SNNI---PLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~--d---~~n~---~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ + ++.- .+++.+.+ -+.|||..+|.. +.+|..+-++..+. |..
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~-st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGAN-STREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCS-SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc-CHHHHHHHHHHHHHcCCC
Confidence 44555566776655322 1 2221 34444333 357999999987 77777777676666 544
No 406
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=68.12 E-value=16 Score=31.53 Aligned_cols=70 Identities=11% Similarity=0.243 Sum_probs=49.3
Q ss_pred HHHHHHHcC-CceEeccCChhhHHHHHhCCCCEEEEc----C------CCCCCHHHHHHHHh-cC-CcEEEeCCCCCCHH
Q psy17999 54 LQQCADQVD-IMFTASAMDQVSFDFLLSANVPFIKIG----S------GDSNNIPLIKYAAS-KQ-KPLIISTGMLPSIE 120 (335)
Q Consensus 54 L~~~~~~~G-i~f~stpfd~~svd~l~~l~v~~~KIa----S------~d~~n~~LL~~~a~-~g-kPvilStG~~~tl~ 120 (335)
+.+.++.+| +.+..++.+.+.+..+.+.|+|++.++ + .....+.+++++.+ .+ .||+++-|.+ .+
T Consensus 107 ~~~~~~~~g~~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~--~~ 184 (227)
T 2tps_A 107 AKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT--ID 184 (227)
T ss_dssp HHHHHHHHTTSEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC--TT
T ss_pred HHHHHHhcCCcEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC--HH
Confidence 555666677 456666788877777778899999973 2 24457899998876 35 8999987755 45
Q ss_pred HHHHH
Q psy17999 121 HVDNI 125 (335)
Q Consensus 121 Ei~~A 125 (335)
.+.++
T Consensus 185 nv~~~ 189 (227)
T 2tps_A 185 NAAPV 189 (227)
T ss_dssp TSHHH
T ss_pred HHHHH
Confidence 55544
No 407
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=68.01 E-value=31 Score=28.29 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~ 123 (335)
......|.++.++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++-+. +.|||+-||.. +.+.+.
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~-~~~~~~ 95 (184)
T 3rqi_A 17 EVFAGTLARGLERRGYAVRQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA-SIATAV 95 (184)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC-CHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC-CHHHHH
Confidence 3445567777778898875555556667888777788876643 367789999998764 57999999988 887777
Q ss_pred HHHH
Q psy17999 124 NIYT 127 (335)
Q Consensus 124 ~Av~ 127 (335)
.|++
T Consensus 96 ~a~~ 99 (184)
T 3rqi_A 96 QAVK 99 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 408
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=67.97 E-value=12 Score=35.09 Aligned_cols=113 Identities=11% Similarity=0.095 Sum_probs=56.3
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecc
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCV 142 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~ 142 (335)
++++.+.|++.+-+..+ .++. ..+++.+.+ -+.|||..+|.. +.+|..+-.+..+. |.. -+++..
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~-~t~~ai~la~~A~~~Gad--avlv~~ 127 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDL-TTAKTVRRAQFAESLGAE--AVMVLP 127 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS-SHHHHHHHHHHHHHTTCS--EEEECC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHHHHhcCCC--EEEECC
Confidence 34555556665554432 1222 134444333 357999999977 77777776666666 544 222222
Q ss_pred cCCCCC--------CCCcccc-cCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeec
Q psy17999 143 SAYPTP--------YPTVKQY-HSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 143 ~g~~~~--------~~~~~~~-~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
--+..+ |..|-+. .-+++|.++.+.. --++....+..|....|++ ||.
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~t---g~~l~~~~~~~L~a~~pnI-vgi 184 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTS---GIDMSVELILRIVREVDNV-TMV 184 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHH---SCCCCHHHHHHHHHHSTTE-EEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchh---CcCCCHHHHHHHHhcCCCE-EEE
Confidence 222110 0000000 1267777654311 1245556777884457764 675
No 409
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=67.74 E-value=18 Score=27.67 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChH
Q psy17999 123 DNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVH 202 (335)
Q Consensus 123 ~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~ 202 (335)
.+|++.+..... .+++++-..+ ..-.+..+..|++.+|++||.+-+......
T Consensus 39 ~~al~~~~~~~~--dlvilD~~lp--------------------------~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~ 90 (133)
T 3b2n_A 39 LDAMKLIEEYNP--NVVILDIEMP--------------------------GMTGLEVLAEIRKKHLNIKVIIVTTFKRPG 90 (133)
T ss_dssp HHHHHHHHHHCC--SEEEECSSCS--------------------------SSCHHHHHHHHHHTTCSCEEEEEESCCCHH
T ss_pred HHHHHHHhhcCC--CEEEEecCCC--------------------------CCCHHHHHHHHHHHCCCCcEEEEecCCCHH
Q ss_pred HHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy17999 203 VCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGI 246 (335)
Q Consensus 203 ~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~i 246 (335)
....|...||. +|.|-++.+ +|...++.+
T Consensus 91 ~~~~~~~~ga~~~l~Kp~~~~---------------~L~~~i~~~ 120 (133)
T 3b2n_A 91 YFEKAVVNDVDAYVLKERSIE---------------ELVETINKV 120 (133)
T ss_dssp HHHHHHHTTCSEEEETTSCHH---------------HHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCHH---------------HHHHHHHHH
No 410
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=67.65 E-value=70 Score=28.74 Aligned_cols=155 Identities=8% Similarity=0.037 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCC-CCCCHHHH-----HHHHhcCC------cE----
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSG-DSNNIPLI-----KYAASKQK------PL---- 109 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~-d~~n~~LL-----~~~a~~gk------Pv---- 109 (335)
.+.+...++.+..++.+++++-.|.+.+++ .-++|++-++|= +-.|..++ +.+.+.|. +|
T Consensus 43 vt~~~~~~~v~~ik~~~~Pvvlfp~~~~~v----~~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gY 118 (228)
T 3vzx_A 43 VTEDNVLRMMSKVRRFLVPCVLEVSAIEAI----VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGY 118 (228)
T ss_dssp CCHHHHHHHHHHHTTSSSCEEEECSCGGGC----CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred CCHHHHHHHHHHhhccCCCEEEeCCCHHHc----cccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEE
Confidence 567888899999988999999999998765 247999998874 33455555 66666673 22
Q ss_pred -EEeCCCC----------CCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCch
Q psy17999 110 -IISTGML----------PSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLN 178 (335)
Q Consensus 110 -ilStG~~----------~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~ 178 (335)
++.-|.+ ++.+++...+..-+--.- +++-|-. |.= ..|+.
T Consensus 119 ivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~-----------------------~~VYld~-sG~-----~~~~~ 169 (228)
T 3vzx_A 119 CIANPDCKAAALTEADADLNMDDIVAYARVSELLQL-----------------------PIFYLEY-SGV-----LGDIE 169 (228)
T ss_dssp EECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTC-----------------------SEEEEEC-TTS-----CCCHH
T ss_pred EEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCC-----------------------CEEEecC-CCC-----cCCHH
Confidence 2333222 122444332221111111 3444444 321 13889
Q ss_pred HHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc--EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 179 VIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ--IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 179 ~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~--vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
.|..+++...++||.+-+--.....+..+. .||+ |+=.-+.- +|+.++++++.++
T Consensus 170 ~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~-------------~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 170 AVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE-------------DFDRALKTVAAVK 226 (228)
T ss_dssp HHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH-------------CHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc-------------CHHHHHHHHHHHh
Confidence 999999987458875544444445554444 6998 33222211 3778888887765
No 411
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=67.58 E-value=33 Score=29.77 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChhh----HHHHHhCCCCEEEEcCCCCCCHHHHHHHHh-cCCcEEEe-CCCC----
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQVS----FDFLLSANVPFIKIGSGDSNNIPLIKYAAS-KQKPLIIS-TGML---- 116 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~s----vd~l~~l~v~~~KIaS~d~~n~~LL~~~a~-~gkPvilS-tG~~---- 116 (335)
+-...+.+.|++.|..++... .|.+. ++.+.+.++|.+-+.+.+.. -++++.+.+ .+.|+++- +...
T Consensus 24 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~~~~~~~ 102 (289)
T 1dbq_A 24 EIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWGEAKADF 102 (289)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECSSCCSSS
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccCCCccCc
Confidence 446677788889998776543 34332 45566678999988776654 356666665 68997763 2111
Q ss_pred C------CHHHHHHHHHHHHh-cCC
Q psy17999 117 P------SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 117 ~------tl~Ei~~Av~~i~~-g~~ 134 (335)
. ..+-...+++++.+ |+.
T Consensus 103 ~~~V~~d~~~~~~~~~~~L~~~G~~ 127 (289)
T 1dbq_A 103 TDAVIDNAFEGGYMAGRYLIERGHR 127 (289)
T ss_dssp CEEEEECHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEeCcHHHHHHHHHHHHHCCCC
Confidence 0 12335567777776 544
No 412
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=67.49 E-value=14 Score=34.74 Aligned_cols=28 Identities=11% Similarity=0.167 Sum_probs=21.0
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+.|||..+|.. +.+|..+-.+.... |..
T Consensus 91 rvpViaGvg~~-st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 91 RVPVVAGAGSN-STSEAVELAKHAEKAGAD 119 (315)
T ss_dssp SSCBEEECCCS-SHHHHHHHHHHHHHTTCS
T ss_pred CCcEEEeCCCC-CHHHHHHHHHHHHhcCCC
Confidence 57999999987 77777776666666 544
No 413
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=67.43 E-value=23 Score=31.14 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHcCCceEe---ccCChh----hHHHHHhCCCCEEEEcCCCCC-CHHHHHHHHhcCCcEEEeC
Q psy17999 49 EEYVMLQQCADQVDIMFTA---SAMDQV----SFDFLLSANVPFIKIGSGDSN-NIPLIKYAASKQKPLIIST 113 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~s---tpfd~~----svd~l~~l~v~~~KIaS~d~~-n~~LL~~~a~~gkPvilSt 113 (335)
+-+..+.+.|++.|..++. +..|.+ .++.+.+.++|.+-+.+.+.. ..+.++.+.+.|.||++--
T Consensus 21 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 21 RCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 4467788899999998876 234443 245556678999988877665 4689999999999988743
No 414
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=67.43 E-value=39 Score=25.71 Aligned_cols=79 Identities=9% Similarity=-0.018 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcCC--ceEeccCChhhHHHHHh-----CCCCEEEEcC--CCCCCHHHHHHHHh------cCCcEEEe
Q psy17999 48 QEEYVMLQQCADQVDI--MFTASAMDQVSFDFLLS-----ANVPFIKIGS--GDSNNIPLIKYAAS------KQKPLIIS 112 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi--~f~stpfd~~svd~l~~-----l~v~~~KIaS--~d~~n~~LL~~~a~------~gkPvilS 112 (335)
......|.+..++.|. .+.+..-..+.++.+.+ ..++++-+.- .+++-+.+++.+.+ ...|||+-
T Consensus 19 ~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~ 98 (146)
T 3ilh_A 19 DIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLL 98 (146)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEE
Confidence 3445667777888887 45444444556677877 6678776653 46778999999887 46799999
Q ss_pred CCCCCCHHHHHHHHH
Q psy17999 113 TGMLPSIEHVDNIYT 127 (335)
Q Consensus 113 tG~~~tl~Ei~~Av~ 127 (335)
|+.. +.+.+..+..
T Consensus 99 t~~~-~~~~~~~~~~ 112 (146)
T 3ilh_A 99 SSSL-DPRDQAKAEA 112 (146)
T ss_dssp CSSC-CHHHHHHHHH
T ss_pred eCCC-ChHHHHHHHh
Confidence 9988 7777766543
No 415
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=67.38 E-value=27 Score=32.36 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=33.3
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ .++. ..+++.+.+ -+.|||..+|.. +.+|..+-.+...+ |..
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~-~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV-STAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-SHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHHHHhCCCC
Confidence 34555556666555332 1221 233333332 357999999987 77777666666665 544
No 416
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=67.37 E-value=41 Score=32.53 Aligned_cols=38 Identities=13% Similarity=0.223 Sum_probs=25.7
Q ss_pred EEEEcCCCCCCHHHHHHHHh-------cC-CcEEEeCCCCCCHHHH
Q psy17999 85 FIKIGSGDSNNIPLIKYAAS-------KQ-KPLIISTGMLPSIEHV 122 (335)
Q Consensus 85 ~~KIaS~d~~n~~LL~~~a~-------~g-kPvilStG~~~tl~Ei 122 (335)
.+|+|+.-+.+.+.++.+++ .| ++|++..||++..+.+
T Consensus 5 ViK~GGssl~~~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~l 50 (421)
T 3ab4_A 5 VQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDEL 50 (421)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHH
T ss_pred EEEEChhHhCCHHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence 58999999999876666443 34 5677777776443333
No 417
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=67.30 E-value=37 Score=25.40 Aligned_cols=76 Identities=11% Similarity=0.049 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEc--CCCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIG--SGDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIa--S~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~A 125 (335)
....|....++.|..+....-..+.++.+.+..+|++-+. -.+++-+.+++.+.+. ..|||+-|+.. +.+....+
T Consensus 15 ~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~ 93 (126)
T 1dbw_A 15 VRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG-DVPMAVEA 93 (126)
T ss_dssp HHHHHHHHHHHTTCEEEEESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT-CHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC-CHHHHHHH
Confidence 3445556666778876643333444566666556766554 3456778899998764 67999999988 76666555
Q ss_pred H
Q psy17999 126 Y 126 (335)
Q Consensus 126 v 126 (335)
.
T Consensus 94 ~ 94 (126)
T 1dbw_A 94 M 94 (126)
T ss_dssp H
T ss_pred H
Confidence 3
No 418
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=67.28 E-value=7.5 Score=38.13 Aligned_cols=121 Identities=19% Similarity=0.239 Sum_probs=72.1
Q ss_pred CCCCcEEEeec---ccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHc-C----CceEeccC--
Q psy17999 1 ECGADCVKFQK---SCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQV-D----IMFTASAM-- 70 (335)
Q Consensus 1 ~aGaDaVKFQ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~-G----i~f~stpf-- 70 (335)
+||.|.|-..- |-.+.++++.. + .....||.+. +.++..|..|-.+.+++.+.+. | |.+=.+|.
T Consensus 181 ~AGfDgVEIH~ahGYLl~QFlSp~~-N---~RtD~yGGs~--lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~ 254 (419)
T 3l5a_A 181 KAGFDGVEISIAQRLLIQTFFSTFS-N---RRTDHYGADS--LKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEET 254 (419)
T ss_dssp HTTCSEEEEECCTTSHHHHHHCTTT-C---CCCSTTSTTC--HHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEE
T ss_pred HcCCCEEEECCccchHHHHccCCcc-c---ccccCCCCch--hhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccc
Confidence 47888887653 22222222211 0 0112355443 1345667888888888887432 2 22222332
Q ss_pred -------Chh----hHHHHHh-CCCCEEEEcCCCC-------------CCHHHHHHHHhc---CCcEEEeCCCCCCHHHH
Q psy17999 71 -------DQV----SFDFLLS-ANVPFIKIGSGDS-------------NNIPLIKYAASK---QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 71 -------d~~----svd~l~~-l~v~~~KIaS~d~-------------~n~~LL~~~a~~---gkPvilStG~~~tl~Ei 122 (335)
+.+ -++.|++ .|+|++-|.+++. .++++++.+.+. +.|||..-|.. |.++.
T Consensus 255 ~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~-t~e~A 333 (419)
T 3l5a_A 255 RGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGIN-SPESA 333 (419)
T ss_dssp ETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCC-SHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCC-CHHHH
Confidence 222 2566778 9999999988653 256777777653 58999888888 99998
Q ss_pred HHHHHH
Q psy17999 123 DNIYTT 128 (335)
Q Consensus 123 ~~Av~~ 128 (335)
+++++.
T Consensus 334 e~~L~~ 339 (419)
T 3l5a_A 334 LDALQH 339 (419)
T ss_dssp HHHGGG
T ss_pred HHHHHh
Confidence 887663
No 419
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=67.26 E-value=13 Score=35.86 Aligned_cols=122 Identities=9% Similarity=0.090 Sum_probs=65.6
Q ss_pred CCCCcEEEeeccc---ccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQKSC---LSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
++|+|+|++---. .+..++...- .....|+.+. .++..|..|-.+.+++.+...-|.+=.++++
T Consensus 178 ~aGfDgVEih~a~GyLl~qFlsp~~N----~R~D~yGGsl---enR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 178 EAGFDGVEIHGAHGYLIDQFMKDQVN----DRSDKYGGSL---ENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HTTCSEEEEEECTTSHHHHHHCTTTC----CCCSTTSSSH---HHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HcCCCEEEEcCccchhhhhccCCccc----CCCCccCccH---HHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 4799999976421 1111111110 0112345442 3455677777888887774212223333332
Q ss_pred --------hhhHHHHHhCCCCEEEEcCCCC-------CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Q psy17999 72 --------QVSFDFLLSANVPFIKIGSGDS-------NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 72 --------~~svd~l~~l~v~~~KIaS~d~-------~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
.+-+..|++.|++++-+..+.. .++++++.+.+ .+.|||..-|. +.++.+ +.|..+..
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i--~~~~a~---~~l~~g~a 324 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY--DREDGN---RALIEDRA 324 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC--CHHHHH---HHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC--CHHHHH---HHHHCCCC
Confidence 1234666788999999976532 23455566654 47898876554 665554 44555533
No 420
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=67.14 E-value=11 Score=35.13 Aligned_cols=68 Identities=12% Similarity=0.181 Sum_probs=50.2
Q ss_pred HHHcCCceEec---cCCh----hhHHHHHhCCCCEEEEcCCC-------CCCHHHHHHHHhcCCcEEEeCCCCCCHHHHH
Q psy17999 58 ADQVDIMFTAS---AMDQ----VSFDFLLSANVPFIKIGSGD-------SNNIPLIKYAASKQKPLIISTGMLPSIEHVD 123 (335)
Q Consensus 58 ~~~~Gi~f~st---pfd~----~svd~l~~l~v~~~KIaS~d-------~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~ 123 (335)
.+..|+++..- -++. +-+..+++.|++++-|..+. ..++++++++.+ +.|||.+-|.. |.+++.
T Consensus 122 ~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-~ipVi~~GgI~-s~~da~ 199 (318)
T 1vhn_A 122 RKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPTFVSGDIF-TPEDAK 199 (318)
T ss_dssp HHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCEEEESSCC-SHHHHH
T ss_pred HHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc-CCeEEEECCcC-CHHHHH
Confidence 34456666554 2433 45678888999999886432 246788888888 99999999999 999998
Q ss_pred HHHH
Q psy17999 124 NIYT 127 (335)
Q Consensus 124 ~Av~ 127 (335)
++++
T Consensus 200 ~~l~ 203 (318)
T 1vhn_A 200 RALE 203 (318)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8766
No 421
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=67.07 E-value=23 Score=26.83 Aligned_cols=78 Identities=10% Similarity=0.013 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCCceEec-cCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTAS-AMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~st-pfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei 122 (335)
......|.+..++.|..+..+ .-..+.++.+.+..++++-+.- .+.+-+.+++.+-+. ..|||+-|+.. +.+..
T Consensus 11 ~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~ 89 (134)
T 3f6c_A 11 PLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKN-DHFYG 89 (134)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC----CTH
T ss_pred HHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCC-ChHHH
Confidence 344566777778889777734 4445567778777788877754 467778999998875 57899999877 66555
Q ss_pred HHHH
Q psy17999 123 DNIY 126 (335)
Q Consensus 123 ~~Av 126 (335)
..+.
T Consensus 90 ~~~~ 93 (134)
T 3f6c_A 90 KHCA 93 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 422
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=67.03 E-value=18 Score=31.68 Aligned_cols=63 Identities=22% Similarity=0.211 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEe
Q psy17999 50 EYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIIS 112 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilS 112 (335)
-...+.+.|++.|..++... .|.+ .++.+.+.++|.+-+.+.+... .+.++.+.+.|.||++-
T Consensus 19 ~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 19 LKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEe
Confidence 35567788889998776543 3432 2455556789999887766554 47888888889998763
No 423
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=66.96 E-value=12 Score=32.74 Aligned_cols=83 Identities=11% Similarity=0.056 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh------hhHHHHHhCCCCEEEEcCCC-CCCHHHHHHHHhcCCcEEEeCCCCC----
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ------VSFDFLLSANVPFIKIGSGD-SNNIPLIKYAASKQKPLIISTGMLP---- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~------~svd~l~~l~v~~~KIaS~d-~~n~~LL~~~a~~gkPvilStG~~~---- 117 (335)
+-+..+.++|++.|+.++....+. +.++.+.+.++|.+-+.+.+ -...+.++.+.+.|.||++--....
T Consensus 22 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~ 101 (291)
T 3l49_A 22 KAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAIN 101 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSE
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCc
Confidence 456778889999999887754432 23455556789999887765 3456888999999999877532110
Q ss_pred -----CHHHHHHHHHHHHh
Q psy17999 118 -----SIEHVDNIYTTVKQ 131 (335)
Q Consensus 118 -----tl~Ei~~Av~~i~~ 131 (335)
..+-...+++++.+
T Consensus 102 ~V~~D~~~~g~~~~~~l~~ 120 (291)
T 3l49_A 102 NTTSNNYSIGAELALQMVA 120 (291)
T ss_dssp EEEECHHHHHHHHHHHHHH
T ss_pred eEecChHHHHHHHHHHHHH
Confidence 12334556666665
No 424
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=66.67 E-value=61 Score=32.84 Aligned_cols=39 Identities=31% Similarity=0.449 Sum_probs=28.7
Q ss_pred hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 201 VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 201 ~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
..++.+++.+||++|= + .|-.-.++|.++.++|+.+++.
T Consensus 178 ~~~a~~l~~~Gad~I~----L------~DT~G~~~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 178 VKLAGQLLDMGADSIA----L------KDMAALLKPQPAYDIIKAIKDT 216 (539)
T ss_dssp HHHHHHHHHTTCSEEE----E------EETTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEE----e------CCCCCCcCHHHHHHHHHHHHHh
Confidence 4456778889998654 2 1666678899999999988764
No 425
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=66.63 E-value=32 Score=38.05 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=71.0
Q ss_pred hHHHHHhCCCCEEEEcC--CCCCCH-HHHHHHHhcCCcE---EEeCC---------CCCCHHHHHHHHHHHHh-cCCCCc
Q psy17999 74 SFDFLLSANVPFIKIGS--GDSNNI-PLIKYAASKQKPL---IISTG---------MLPSIEHVDNIYTTVKQ-YHSNLS 137 (335)
Q Consensus 74 svd~l~~l~v~~~KIaS--~d~~n~-~LL~~~a~~gkPv---ilStG---------~~~tl~Ei~~Av~~i~~-g~~~~~ 137 (335)
.++.+.+.|++.+-|.- .++.|. .+.+.+.+.|+-+ +.-+| .+ +++.+.+.++.+.. |.. .
T Consensus 632 ~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~-~~~~~~~~a~~~~~~Ga~--~ 708 (1150)
T 3hbl_A 632 FVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIY-TLEYYVKLAKELEREGFH--I 708 (1150)
T ss_dssp HHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSS-SHHHHHHHHHHHHHTTCS--E
T ss_pred HHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCC-CHHHHHHHHHHHHHcCCC--e
Confidence 36666677888776543 344443 2334444455432 22231 24 66777777777666 544 4
Q ss_pred eeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCC-C--hHHHHHHHHcCCcE
Q psy17999 138 ILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHEN-G--VHVCYAAVAMGAQI 214 (335)
Q Consensus 138 ~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~-g--~~~~~aAvalGA~v 214 (335)
|-+|+. ..+=+|..-.+ .+..|++.+ ++||++-.|.. | ...+++|+..||++
T Consensus 709 i~l~Dt----------------------~G~~~P~~~~~--lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~ 763 (1150)
T 3hbl_A 709 LAIKDM----------------------AGLLKPKAAYE--LIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDI 763 (1150)
T ss_dssp EEEEET----------------------TCCCCHHHHHH--HHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSE
T ss_pred eeEcCc----------------------cCCCCHHHHHH--HHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCE
Confidence 444443 23344443333 377889998 99999988864 4 66678999999999
Q ss_pred EEe
Q psy17999 215 IEK 217 (335)
Q Consensus 215 IEk 217 (335)
|+-
T Consensus 764 vD~ 766 (1150)
T 3hbl_A 764 IDT 766 (1150)
T ss_dssp EEE
T ss_pred EEE
Confidence 884
No 426
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=66.61 E-value=26 Score=30.14 Aligned_cols=64 Identities=14% Similarity=0.269 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHcCCceEecc----CChh----hHHHHHhCC-CCEEEEcCCCC-CCHHHHHHHHhcCCcEEEe
Q psy17999 49 EEYVMLQQCADQVDIMFTASA----MDQV----SFDFLLSAN-VPFIKIGSGDS-NNIPLIKYAASKQKPLIIS 112 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp----fd~~----svd~l~~l~-v~~~KIaS~d~-~n~~LL~~~a~~gkPvilS 112 (335)
+-+..+.+.|+++|..+.... .|.+ .++.+.+.+ +|.+-+.+.+. .+.+.++.+.+.+.|+++-
T Consensus 17 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 17 QVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 446678889999999887755 3332 355566668 99999888654 5788999999999998865
No 427
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=66.31 E-value=33 Score=26.67 Aligned_cols=79 Identities=9% Similarity=0.143 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh------cCCcEEEeCCCCCC
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS------KQKPLIISTGMLPS 118 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~------~gkPvilStG~~~t 118 (335)
.......|.++.++.|..+.+..-..+.++.+.+..+|++-+.- .+++-+.+++++.+ ...|||+-|+.. +
T Consensus 23 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~-~ 101 (143)
T 3m6m_D 23 HEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV-T 101 (143)
T ss_dssp SHHHHHHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC-C
T ss_pred CHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC-C
Confidence 44456667777788888776544445556777777788876653 46777899988863 237999999988 7
Q ss_pred HHHHHHHH
Q psy17999 119 IEHVDNIY 126 (335)
Q Consensus 119 l~Ei~~Av 126 (335)
.+.+..+.
T Consensus 102 ~~~~~~~~ 109 (143)
T 3m6m_D 102 PEAIRACE 109 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 428
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=66.30 E-value=29 Score=29.15 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~ 127 (335)
....|....++.|..+....-..+.++.+.+..+|++- -.+++-+.+++.+.+. ..|||+-|+.. +.+.+..+++
T Consensus 12 ~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi--lp~~~g~~~~~~lr~~~~~~~ii~lt~~~-~~~~~~~~~~ 88 (223)
T 2hqr_A 12 LGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVSSDNP-TSEEEVHAFE 88 (223)
T ss_dssp HHHHHHHHHGGGTCCEEEESSHHHHHHHHTTSCCSEEE--ECCTTHHHHHHHHHHHCTTSEEEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcEEEEECCHHHHHHHHhcCCCCEEE--eCCCCHHHHHHHHHhCCCCCcEEEEECCC-CHHHHHHHHH
Confidence 34456666677888877444445556777776677766 4567778999988765 68999999988 7777766654
No 429
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=65.99 E-value=38 Score=31.33 Aligned_cols=28 Identities=14% Similarity=0.149 Sum_probs=19.9
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+.|||..+|.. +.+|..+-.+..+. |-.
T Consensus 81 rvpViaGvg~~-~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 81 RVPVIAGTGSN-NTHASIDLTKKATEVGVD 109 (301)
T ss_dssp SSCEEEECCCS-CHHHHHHHHHHHHHTTCS
T ss_pred CceEEeCCCCC-CHHHHHHHHHHHHhcCCC
Confidence 57999999987 77776666666665 543
No 430
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=65.92 E-value=40 Score=25.87 Aligned_cols=77 Identities=13% Similarity=0.104 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNI 125 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~A 125 (335)
.....|....++.|..+....-..+.++.+.+..+|++-+.- .+++-+.+++.+.+. ..|||+-|+.. +.+.+..+
T Consensus 15 ~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~-~~~~~~~~ 93 (136)
T 2qzj_A 15 DNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN-EDQSILNA 93 (136)
T ss_dssp HHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC-CHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC-CHHHHHHH
Confidence 445556666777788765443345567777777778776543 345668899988764 68999999888 77666655
Q ss_pred H
Q psy17999 126 Y 126 (335)
Q Consensus 126 v 126 (335)
+
T Consensus 94 ~ 94 (136)
T 2qzj_A 94 L 94 (136)
T ss_dssp H
T ss_pred H
Confidence 4
No 431
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=65.90 E-value=15 Score=35.32 Aligned_cols=122 Identities=7% Similarity=0.050 Sum_probs=66.7
Q ss_pred CCCCcEEEeec---ccccccccccccCCCCCCCCCCcccHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC------
Q psy17999 1 ECGADCVKFQK---SCLSTKFTQSALDRPYLSPHAWANTYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD------ 71 (335)
Q Consensus 1 ~aGaDaVKFQ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd------ 71 (335)
++|+|+|...- |-.+.+++...- .....|+.+. .++.+|..|-.+.+++.+...-|.+=.++++
T Consensus 177 ~aGfDgVEIh~a~GYLl~QFlsp~~N----~R~D~yGGsl---enR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 177 RAGFDMVEVHAANACLPNQFLATGTN----RRTDQYGGSI---ENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHTCSEEEEEECTTCHHHHHHSTTTC----CCCSTTSSSH---HHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HcCCCEEEEcCcccchHHhccCCccc----cCCCccCcch---hhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 36999999753 222222222110 0112345443 3455677777777777774212222233331
Q ss_pred ----hhh----HHHHHhCCCCEEEEcCCCC------CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Q psy17999 72 ----QVS----FDFLLSANVPFIKIGSGDS------NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 72 ----~~s----vd~l~~l~v~~~KIaS~d~------~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
.+. +..|++.|++++-|..+.. .++++++.+.+ .+.|||..-|. +.++.+ +.+..|..
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi--~~~~a~---~~l~~g~a 322 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY--DAGRAQ---ARLDDNTA 322 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC--CHHHHH---HHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC--CHHHHH---HHHHCCCc
Confidence 122 5667788999999977531 25677777765 47898876554 655554 44555433
No 432
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=65.34 E-value=47 Score=31.43 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=46.4
Q ss_pred CC-ceEeccCChh----------hHHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCH
Q psy17999 62 DI-MFTASAMDQV----------SFDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSI 119 (335)
Q Consensus 62 Gi-~f~stpfd~~----------svd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl 119 (335)
|| ..+.|||+.+ -++++.+.|++.+-+..+ .++. ..+++.+.+ -+.|||..+|.. +.
T Consensus 34 Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~-st 112 (343)
T 2v9d_A 34 GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGT-NA 112 (343)
T ss_dssp EECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSS-CH
T ss_pred CeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-CH
Confidence 44 5678888753 256777788888776532 2332 234444433 357999999987 77
Q ss_pred HHHHHHHHHHHh-cCC
Q psy17999 120 EHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 120 ~Ei~~Av~~i~~-g~~ 134 (335)
+|..+-.+...+ |..
T Consensus 113 ~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 113 RETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhcCCC
Confidence 777776666666 654
No 433
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=65.19 E-value=85 Score=28.88 Aligned_cols=151 Identities=17% Similarity=0.233 Sum_probs=93.6
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCCC---CCHHHHH---HHHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGDS---NNIPLIK---YAAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d~---~n~~LL~---~~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-+ .++++ .++++|+|.+-+...-. +.-.+++ ++|+ +++
T Consensus 60 ~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 139 (301)
T 1xky_A 60 PTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPL 139 (301)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 458999999998887653 4777766543 34444 45678999887755433 3344554 4554 689
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||||= ||..++.+.+.+.++ .+ +++-+--. .-|+..+..
T Consensus 140 PiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nIvgiKds--------sgd~~~~~~ 183 (301)
T 1xky_A 140 PVMLYNVPGRSIVQISVDTVVRLSE-----IE-----------------------NIVAIKDA--------GGDVLTMTE 183 (301)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHHT-----ST-----------------------TEEEEEEC--------SSCHHHHHH
T ss_pred CEEEEeCccccCCCCCHHHHHHHHc-----CC-----------------------CEEEEEcC--------CCCHHHHHH
Confidence 99993 787778888776543 12 33322211 246778888
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+++..| ++.| ||+.. .....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 184 ~~~~~~~~f~v-~~G~d---~~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 233 (301)
T 1xky_A 184 IIEKTADDFAV-YSGDD---GLTLPAMAVGAKGIVS-------------VASHVIGNEMQEMIAAFQ 233 (301)
T ss_dssp HHHHSCTTCEE-EESSG---GGHHHHHHTTCCEEEE-------------STHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEE-EECcH---HHHHHHHHcCCCEEEc-------------CHHHhCHHHHHHHHHHHH
Confidence 887774 3434 76653 234556788987 443 112345777777766544
No 434
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=65.17 E-value=29 Score=32.02 Aligned_cols=59 Identities=8% Similarity=-0.016 Sum_probs=35.1
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHhc---CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAASK---QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~~---gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ .++. ..+++.+.+. +.|||..+|.. +.+|..+-.+...+ |..
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~-~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVD-SIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCS-SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc-cHHHHHHHHHHHHhcCCC
Confidence 45566667776665432 2222 2444544432 46999999987 77777666666665 543
No 435
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=65.03 E-value=12 Score=32.97 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHHHHcCCceEe--ccCC-hhhHHHHHhCCCC-EEEEcCCC----------CCCHHHHHHHHhc-CCcEE
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTA--SAMD-QVSFDFLLSANVP-FIKIGSGD----------SNNIPLIKYAASK-QKPLI 110 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~s--tpfd-~~svd~l~~l~v~-~~KIaS~d----------~~n~~LL~~~a~~-gkPvi 110 (335)
++.++..++.+.|+++|+.++. +|.+ .+.+..+.+. ++ ++-+-+.. ..++.+++++.+. +.||+
T Consensus 117 ~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~ 195 (248)
T 1geq_A 117 LPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVA 195 (248)
T ss_dssp CCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEE
T ss_pred CChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEE
Confidence 3456677889999999977654 3333 3344444443 55 54332221 1235577777664 79999
Q ss_pred EeCCCCCCHHHHHHHHH
Q psy17999 111 ISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 111 lStG~~~tl~Ei~~Av~ 127 (335)
.+-|.+ +.+++.++.+
T Consensus 196 ~~GGI~-~~e~i~~~~~ 211 (248)
T 1geq_A 196 VGFGVS-KREHVVSLLK 211 (248)
T ss_dssp EESCCC-SHHHHHHHHH
T ss_pred EEeecC-CHHHHHHHHH
Confidence 999999 8888887543
No 436
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=65.03 E-value=44 Score=31.91 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCceEecc-CChh----------------hHHHHH--------------hCCCCEEEEcCCCCCCHHHHH
Q psy17999 52 VMLQQCADQVDIMFTASA-MDQV----------------SFDFLL--------------SANVPFIKIGSGDSNNIPLIK 100 (335)
Q Consensus 52 ~~L~~~~~~~Gi~f~stp-fd~~----------------svd~l~--------------~l~v~~~KIaS~d~~n~~LL~ 100 (335)
..|++.+++.||.++++- |..+ +++.|. ...+-+||++...-.-.+.=+
T Consensus 113 ~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~ 192 (360)
T 3tn4_A 113 AFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEK 192 (360)
T ss_dssp HHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHH
Q ss_pred HHHh--------cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEee-ecCCCCC
Q psy17999 101 YAAS--------KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILH-CVSAYPT 170 (335)
Q Consensus 101 ~~a~--------~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llH-C~s~YP~ 170 (335)
++-+ +|+||++=|+.+ +..- ..++.+++ |.. -+++++.| |.+
T Consensus 193 k~frA~a~aa~etG~Pv~iHt~~~-~~~~--e~l~iL~eeG~~---------------------~~~vvi~H~~~~---- 244 (360)
T 3tn4_A 193 MFFRAAARAQKETGAVIITHTQEG-TMGP--EQAAYLLEHGAD---------------------PKKIVIGHMCDN---- 244 (360)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSTT-CCHH--HHHHHHHHTTCC---------------------GGGEEECCGGGC----
T ss_pred HHHHHHHHHHHHhCCcEEEEcCcc-cCCH--HHHHHHHHcCCC---------------------CCceEEEcCCCC----
Q ss_pred CccCCCchHHHHHHHHCCCCCeecC
Q psy17999 171 PYHDINLNVIHTLRSRYPDIPIGYS 195 (335)
Q Consensus 171 ~~~~~nL~~i~~L~~~fp~~pVG~S 195 (335)
-|+..+..+-++ ++-|+|+
T Consensus 245 ----~d~~~~~~~l~~--G~yl~fD 263 (360)
T 3tn4_A 245 ----TDPDYHRKTLAY--GVYIAFD 263 (360)
T ss_dssp ----CCHHHHHHHHTT--TCEEEEC
T ss_pred ----CCHHHHHHHHHc--CCEEEEc
No 437
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=65.03 E-value=92 Score=29.21 Aligned_cols=69 Identities=9% Similarity=0.174 Sum_probs=52.3
Q ss_pred HHHHHHHHHcC-CceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVD-IMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~G-i~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
..|++.-++.| ..++.++||.-++..+++.|++++.+.+..+. ....|.| ++|.. |++|+...++.+.
T Consensus 14 ~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a-------~s~~G~p---D~~~v-t~~em~~~~~~i~ 82 (307)
T 3lye_A 14 KKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTT-------ASRLGQP---DLAIA-QLHDMRDNADMIA 82 (307)
T ss_dssp HHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHH-------HHHHCCC---SSSCS-CHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHH-------HHhcCCC---CCCCC-CHHHHHHHHHhhh
Confidence 34555556654 66688999999999999999999999653221 2345888 78888 9999998888776
Q ss_pred h
Q psy17999 131 Q 131 (335)
Q Consensus 131 ~ 131 (335)
.
T Consensus 83 r 83 (307)
T 3lye_A 83 N 83 (307)
T ss_dssp T
T ss_pred c
Confidence 4
No 438
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=64.96 E-value=27 Score=33.15 Aligned_cols=59 Identities=8% Similarity=0.051 Sum_probs=35.1
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ .++. ..+++..+.-+.|||..+|.. +.+|..+-.+...+ |-.
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~-st~eai~la~~A~~~Gad 120 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAV-NTASAVAHAVHAQKVGAK 120 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCS-SHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHHHHhcCCC
Confidence 45555666776655432 2332 234444334468999999987 77776666666665 544
No 439
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=64.89 E-value=27 Score=31.99 Aligned_cols=25 Identities=4% Similarity=-0.075 Sum_probs=19.1
Q ss_pred hcCCHHHHHHHHHHHHHcCCceEec
Q psy17999 44 LEFSQEEYVMLQQCADQVDIMFTAS 68 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~Gi~f~st 68 (335)
..|+.++...+.+...+.|+..+--
T Consensus 21 ~~~~~e~k~~i~~~L~~~Gv~~IE~ 45 (295)
T 1ydn_A 21 RFVPTADKIALINRLSDCGYARIEA 45 (295)
T ss_dssp SCCCHHHHHHHHHHHTTTTCSEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCcCEEEE
Confidence 3588899998888888888766543
No 440
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=64.89 E-value=28 Score=30.37 Aligned_cols=64 Identities=22% Similarity=0.188 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEe
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIIS 112 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilS 112 (335)
+-+..+.+++++.|..++... .|.+ .++.+.+.++|.+-+.+.+... .+.++++.+.+.|+++-
T Consensus 19 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 19 VLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEE
Confidence 446677888999998766533 3432 2455556789999887766554 47888888889998764
No 441
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=64.83 E-value=19 Score=31.45 Aligned_cols=55 Identities=22% Similarity=0.241 Sum_probs=43.3
Q ss_pred hhhHHHHHhCCCCEEEEcCCC------CCCHHHHHHHHhc-CCcEEEeCCCCCCHHHHHHHHH
Q psy17999 72 QVSFDFLLSANVPFIKIGSGD------SNNIPLIKYAASK-QKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 72 ~~svd~l~~l~v~~~KIaS~d------~~n~~LL~~~a~~-gkPvilStG~~~tl~Ei~~Av~ 127 (335)
.+.++.++++|++.+-+-+.+ -.++.+++++.+. +.|||.+-|.. +.+++.++.+
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia~GGI~-~~~d~~~~~~ 213 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVS-SLDDLRAIAT 213 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEEESCCC-SHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEEECCCC-CHHHHHHHHh
Confidence 345577788999988876533 3589999998874 78999999999 9999888654
No 442
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=64.83 E-value=41 Score=25.06 Aligned_cols=78 Identities=12% Similarity=0.119 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCceEeccCC-hhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcEEEeCCCCCCHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD-QVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS----KQKPLIISTGMLPSIEH 121 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd-~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPvilStG~~~tl~E 121 (335)
.....|....++.|...+.+..+ .+.++.+.+..+|++-+.- .+++-..+++.+.+ ...|||+-|+.. +.+.
T Consensus 15 ~~~~~l~~~l~~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~-~~~~ 93 (128)
T 1jbe_A 15 TMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA-KKEN 93 (128)
T ss_dssp HHHHHHHHHHHHTTCCCEEEESSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC-CHHH
T ss_pred HHHHHHHHHHHHcCCcEEEeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc-cHHH
Confidence 33445666666778743333334 4556777666678776543 35677889999876 257999999988 7776
Q ss_pred HHHHHH
Q psy17999 122 VDNIYT 127 (335)
Q Consensus 122 i~~Av~ 127 (335)
+..+++
T Consensus 94 ~~~~~~ 99 (128)
T 1jbe_A 94 IIAAAQ 99 (128)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 443
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=64.80 E-value=20 Score=33.06 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=21.1
Q ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 106 QKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 106 gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+.|||..+|.. +.+|..+-.+...+ |..
T Consensus 71 rvpviaGvg~~-~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 71 RVPVIAGTGTN-DTEKSIQASIQAKALGAD 99 (292)
T ss_dssp SSCEEEECCCS-CHHHHHHHHHHHHHHTCS
T ss_pred CCcEEEeCCcc-cHHHHHHHHHHHHHcCCC
Confidence 57999999987 77777776676666 543
No 444
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=64.68 E-value=7.8 Score=34.26 Aligned_cols=67 Identities=21% Similarity=0.244 Sum_probs=44.9
Q ss_pred CCceEe--ccCChhhHHHHHhCCCCEEEE--------cCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 62 DIMFTA--SAMDQVSFDFLLSANVPFIKI--------GSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 62 Gi~f~s--tpfd~~svd~l~~l~v~~~KI--------aS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
++.++- .+-+..+++.+.++.+|++-+ |++...||.+|+.+....+|+||+-|.+ .+.+.+|++.+.
T Consensus 97 ~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~~~~~p~~LAGGL~--peNV~~ai~~~~ 173 (205)
T 1nsj_A 97 RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLN--PENVRSAIDVVR 173 (205)
T ss_dssp TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGGGGSSCEEEESSCC--TTTHHHHHHHHC
T ss_pred CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhhcCCCcEEEECCCC--HHHHHHHHHhcC
Confidence 455553 344555555555555777765 5678889999876423478999999965 667888877654
No 445
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=64.62 E-value=23 Score=29.79 Aligned_cols=134 Identities=14% Similarity=0.123 Sum_probs=72.8
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhc-C-CcEEEeC---------------
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASK-Q-KPLIIST--------------- 113 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~-g-kPvilSt--------------- 113 (335)
.+.|++......+.+++.--+.+.+..+.+.|++.|-+.+..+.+..|++.+.+. + ..++++.
T Consensus 44 ~~~l~~~~~~~~i~vi~~~~~~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~ 123 (237)
T 3cwo_X 44 IKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYS 123 (237)
T ss_dssp HHHHHHHSSSCCEEEECCSSTHHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETT
T ss_pred HHHHHHhCCCCCEEEEECCCCHHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeC
Confidence 4444444445567777655556777777888999888766434566777766553 2 2233321
Q ss_pred CCCC---CHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCC
Q psy17999 114 GMLP---SIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDI 190 (335)
Q Consensus 114 G~~~---tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~ 190 (335)
|.+. ++.++. +.+..... ..+++++.+.=++. ..++++.|..++++. +.
T Consensus 124 g~~~~~~~~~~~i---~~~~~~~~-----------------------~~vli~~~~~~g~~-~g~~~~~i~~~~~~~-~~ 175 (237)
T 3cwo_X 124 GKKNTGILLRDWV---VEVEKRGA-----------------------GEILLTSIDRDGTK-SGYDTEMIRFVRPLT-TL 175 (237)
T ss_dssp TTEEEEEEHHHHH---HHHHHHTC-----------------------SEEEEEETTTTTCC-SCCCHHHHHHHGGGC-CS
T ss_pred CccccccCHHHHH---HHHhhcCC-----------------------CeEEEEecCCCCcc-ccccHHHHHHHHHhc-CC
Confidence 1111 333333 33333111 33455554322332 335588899998887 89
Q ss_pred Ceec-CCCCCChHHHHHHHHcCCc
Q psy17999 191 PIGY-SGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 191 pVG~-SdHt~g~~~~~aAvalGA~ 213 (335)
||.. .+.+... -...+...||+
T Consensus 176 Pvia~~g~~~~~-~~~~~~~~G~~ 198 (237)
T 3cwo_X 176 PIIASGGAGKME-HFLEAFLAGAD 198 (237)
T ss_dssp CEEEESCCCSHH-HHHHHHHHTCS
T ss_pred CEEecCCCCCHH-HHHHHHHcCcH
Confidence 9844 3444333 33334467887
No 446
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=64.55 E-value=62 Score=29.73 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcC--CceEec-cC----C-hhhHHHH---H-hCCCCEEEEcCC---------CCC---CHHHHHHHHh
Q psy17999 49 EEYVMLQQCADQVD--IMFTAS-AM----D-QVSFDFL---L-SANVPFIKIGSG---------DSN---NIPLIKYAAS 104 (335)
Q Consensus 49 e~~~~L~~~~~~~G--i~f~st-pf----d-~~svd~l---~-~l~v~~~KIaS~---------d~~---n~~LL~~~a~ 104 (335)
.....+.+.|+++. +..+.+ |. | ..+++.| . +.|+..++|+.. .++ ..|+++.+++
T Consensus 91 ~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e 170 (350)
T 2gwg_A 91 ICNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVE 170 (350)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHH
Confidence 55667888888764 222333 32 2 3344444 3 578999999753 233 3689999999
Q ss_pred cCCcEEEeCCCC
Q psy17999 105 KQKPLIISTGML 116 (335)
Q Consensus 105 ~gkPvilStG~~ 116 (335)
.|+||+|=+|.+
T Consensus 171 ~~lpv~iH~~~~ 182 (350)
T 2gwg_A 171 LEIPAMIHVSTS 182 (350)
T ss_dssp HTCCEEECCCC-
T ss_pred cCCeEEECCCCC
Confidence 999999988865
No 447
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=64.21 E-value=23 Score=32.25 Aligned_cols=82 Identities=7% Similarity=0.137 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCceEecc--CChhhHHH----HHhCCCCEEEEcCCCC------CCHHHHHHHHhcCCcEEEeCCC
Q psy17999 48 QEEYVMLQQCADQVDIMFTASA--MDQVSFDF----LLSANVPFIKIGSGDS------NNIPLIKYAASKQKPLIISTGM 115 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stp--fd~~svd~----l~~l~v~~~KIaS~d~------~n~~LL~~~a~~gkPvilStG~ 115 (335)
.+++..+.+.|...-+.++... .+.+.+.. ..+.|+||+|...+-. .+..++++......||..|=|.
T Consensus 130 ~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VKasGGI 209 (239)
T 3ngj_A 130 EKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKALVKAAGGI 209 (239)
T ss_dssp HHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSEEEEESSC
T ss_pred HHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCceEEEeCCC
Confidence 4677778888875445655432 34444433 3578999999997643 2677888877778999999999
Q ss_pred CCCHHHHHHHHHHHHhcC
Q psy17999 116 LPSIEHVDNIYTTVKQYH 133 (335)
Q Consensus 116 ~~tl~Ei~~Av~~i~~g~ 133 (335)
. |.++ |++++..|.
T Consensus 210 r-t~~d---a~~~i~aGA 223 (239)
T 3ngj_A 210 R-TFDD---AMKMINNGA 223 (239)
T ss_dssp C-SHHH---HHHHHHTTE
T ss_pred C-CHHH---HHHHHHhcc
Confidence 9 8755 445555453
No 448
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=64.11 E-value=14 Score=34.67 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=21.2
Q ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 105 KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 105 ~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
.+.|||..+|.. +..|..+-++.... |..
T Consensus 79 grvpviaGvg~~-~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 79 PDFPIMAGVGAH-STRQVLEHINDASVAGAN 108 (318)
T ss_dssp TTSCEEEECCCS-SHHHHHHHHHHHHHHTCS
T ss_pred CCCcEEEeCCCC-CHHHHHHHHHHHHHcCCC
Confidence 357999999987 77777776666666 543
No 449
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=64.01 E-value=23 Score=33.05 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=42.8
Q ss_pred ceEeccCChhh----------HHHHHhCCCCEEEEcCCC-----CCCH---HHHHHHHhc---CCcEEEeCCCCCCHHHH
Q psy17999 64 MFTASAMDQVS----------FDFLLSANVPFIKIGSGD-----SNNI---PLIKYAASK---QKPLIISTGMLPSIEHV 122 (335)
Q Consensus 64 ~f~stpfd~~s----------vd~l~~l~v~~~KIaS~d-----~~n~---~LL~~~a~~---gkPvilStG~~~tl~Ei 122 (335)
..+.|||+.+. ++++.+.|++.+-+..+. ++.- .+++.+.+. +.|||..+|.. +.+|.
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~-~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTN-DTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCS-SHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc-CHHHH
Confidence 34667776542 566667777766554331 2222 345554443 57999999987 77777
Q ss_pred HHHHHHHHh-cC
Q psy17999 123 DNIYTTVKQ-YH 133 (335)
Q Consensus 123 ~~Av~~i~~-g~ 133 (335)
.+-.+...+ |.
T Consensus 92 i~la~~A~~~Ga 103 (311)
T 3h5d_A 92 IEFVKEVAEFGG 103 (311)
T ss_dssp HHHHHHHHHSCC
T ss_pred HHHHHHHHhcCC
Confidence 776676666 54
No 450
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=64.01 E-value=64 Score=32.96 Aligned_cols=142 Identities=8% Similarity=0.069 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHcCCceEeccCC-----------------------------------------------hhhHHHHHhC
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD-----------------------------------------------QVSFDFLLSA 81 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd-----------------------------------------------~~svd~l~~l 81 (335)
+.|+++.+.+++.|-.++.-.|- .+++..+.+.
T Consensus 89 ~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~a 168 (690)
T 3k30_A 89 PALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEA 168 (690)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHc
Confidence 67899999999999776653331 1445566778
Q ss_pred CCCEEEEcCCCCC-----------C-----------------HHHHHHHHh-c--CCcEEEeC-------CCCCCHHHHH
Q psy17999 82 NVPFIKIGSGDSN-----------N-----------------IPLIKYAAS-K--QKPLIIST-------GMLPSIEHVD 123 (335)
Q Consensus 82 ~v~~~KIaS~d~~-----------n-----------------~~LL~~~a~-~--gkPvilSt-------G~~~tl~Ei~ 123 (335)
|.|.+.|..+.=. | .++++++.+ . +.||.+.. |+. +.+|..
T Consensus 169 GfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~-~~~~~~ 247 (690)
T 3k30_A 169 GYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGI-TREDIE 247 (690)
T ss_dssp TCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSC-CHHHHH
T ss_pred CCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCC-CHHHHH
Confidence 9999999543211 1 133444433 2 56788775 333 677777
Q ss_pred HHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecC----CCCC--CccCCCchHHHHHHHHCCCCCeecCCC
Q psy17999 124 NIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVS----AYPT--PYHDINLNVIHTLRSRYPDIPIGYSGH 197 (335)
Q Consensus 124 ~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s----~YP~--~~~~~nL~~i~~L~~~fp~~pVG~SdH 197 (335)
..++.+..+ . ++.-+|+-+ ..|. .....++..+..+|+.+ ++||.-.+-
T Consensus 248 ~~~~~l~~~-~-----------------------d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~pvi~~G~ 302 (690)
T 3k30_A 248 GVLRELGEL-P-----------------------DLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT-TKPVVGVGR 302 (690)
T ss_dssp HHHHHHTTS-S-----------------------SEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC-SSCEEECSC
T ss_pred HHHHHHHhh-c-----------------------CEEEEecccccccCCCCccCCccccHHHHHHHHHHc-CCeEEEeCC
Confidence 766666542 2 333344321 0111 12345677788889988 899976665
Q ss_pred CCChHHHHHHHHcC-CcEEE
Q psy17999 198 ENGVHVCYAAVAMG-AQIIE 216 (335)
Q Consensus 198 t~g~~~~~aAvalG-A~vIE 216 (335)
-.....+..++.-| |+.|-
T Consensus 303 i~~~~~a~~~l~~g~~d~v~ 322 (690)
T 3k30_A 303 FTSPDAMVRQIKAGILDLIG 322 (690)
T ss_dssp CCCHHHHHHHHHTTSCSEEE
T ss_pred CCCHHHHHHHHHCCCcceEE
Confidence 55567777788887 77554
No 451
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=64.00 E-value=26 Score=27.29 Aligned_cols=84 Identities=15% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCCh
Q psy17999 122 VDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGV 201 (335)
Q Consensus 122 i~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~ 201 (335)
..+|++.+..... .+++++-..+ +.-.+..+..|++.+|++||.+-.-....
T Consensus 50 ~~~a~~~l~~~~~--dlii~d~~l~--------------------------~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 101 (152)
T 3eul_A 50 GAAALELIKAHLP--DVALLDYRMP--------------------------GMDGAQVAAAVRSYELPTRVLLISAHDEP 101 (152)
T ss_dssp HHHHHHHHHHHCC--SEEEEETTCS--------------------------SSCHHHHHHHHHHTTCSCEEEEEESCCCH
T ss_pred HHHHHHHHHhcCC--CEEEEeCCCC--------------------------CCCHHHHHHHHHhcCCCCeEEEEEccCCH
Q ss_pred HHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 202 HVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 202 ~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
.....|..+||. +|-|-++.+ +|...++.+-.
T Consensus 102 ~~~~~~~~~g~~~~l~Kp~~~~---------------~l~~~i~~~~~ 134 (152)
T 3eul_A 102 AIVYQALQQGAAGFLLKDSTRT---------------EIVKAVLDCAK 134 (152)
T ss_dssp HHHHHHHHTTCSEEEETTCCHH---------------HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCHH---------------HHHHHHHHHHc
No 452
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=63.99 E-value=34 Score=31.40 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=33.4
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ .++. ..+++.+.+ -..|||..+|.. +.+|..+-.+..++ |..
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~-~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSN-CTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCS-SHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCC-CHHHHHHHHHHHHhcCCC
Confidence 34555556666555332 1221 234444332 357999999987 77777666666665 544
No 453
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=63.96 E-value=14 Score=34.41 Aligned_cols=87 Identities=6% Similarity=-0.016 Sum_probs=47.1
Q ss_pred HHHHHHhc--CCcEEEeCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccc-----------c--CceEE
Q psy17999 98 LIKYAASK--QKPLIISTGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQY-----------H--SNLSI 161 (335)
Q Consensus 98 LL~~~a~~--gkPvilStG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~-----------~--~~l~l 161 (335)
+++.+.+. +.|||..+|.. +.+|..+-.+...+ |.. -+++ ..-+ .+++-+.+ . -+++|
T Consensus 66 v~~~~v~~~grvpViaGvg~~-~t~~ai~la~~A~~~Gad--avlv-~~P~--~~~s~~~l~~~f~~va~a~~~~lPiil 139 (313)
T 3dz1_A 66 VATRFIKRAKSMQVIVGVSAP-GFAAMRRLARLSMDAGAA--GVMI-APPP--SLRTDEQITTYFRQATEAIGDDVPWVL 139 (313)
T ss_dssp HHHHHHHHCTTSEEEEECCCS-SHHHHHHHHHHHHHHTCS--EEEE-CCCT--TCCSHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred HHHHHHHHcCCCcEEEecCCC-CHHHHHHHHHHHHHcCCC--EEEE-CCCC--CCCCHHHHHHHHHHHHHhCCCCCcEEE
Confidence 44444333 68999999987 77777776676666 654 2222 1111 11111111 2 26776
Q ss_pred eeecCCCCCCccCCCchHHHHHHHHCCCCCeec
Q psy17999 162 LHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGY 194 (335)
Q Consensus 162 lHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~ 194 (335)
.++.+. + --++....+..|.+.+|++ ||.
T Consensus 140 Yn~P~~--t-g~~l~~~~~~~La~~~pnI-vgi 168 (313)
T 3dz1_A 140 QDYPLT--L-SVVMTPKVIRQIVMDSASC-VML 168 (313)
T ss_dssp EECHHH--H-CCCCCHHHHHHHHHHCSSE-EEE
T ss_pred EeCccc--c-CcCCCHHHHHHHHHhCCCE-EEE
Confidence 665321 1 1245556778887668763 575
No 454
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=63.70 E-value=80 Score=31.27 Aligned_cols=38 Identities=32% Similarity=0.445 Sum_probs=25.8
Q ss_pred hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 201 VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 201 ~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
..++.+++.+||++|= + .|-.-.+.|.++.++|+.+++
T Consensus 161 ~~~a~~l~~~Gad~I~----l------~DT~G~~~P~~v~~lv~~l~~ 198 (464)
T 2nx9_A 161 VDVAQQLAELGVDSIA----L------KDMAGILTPYAAEELVSTLKK 198 (464)
T ss_dssp HHHHHHHHHTTCSEEE----E------EETTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEE----E------cCCCCCcCHHHHHHHHHHHHH
Confidence 3345667788887553 1 155566788888888888876
No 455
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=63.63 E-value=32 Score=33.02 Aligned_cols=128 Identities=15% Similarity=0.118 Sum_probs=67.1
Q ss_pred CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEe--eecCCCCC
Q psy17999 94 NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSIL--HCVSAYPT 170 (335)
Q Consensus 94 ~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~ll--HC~s~YP~ 170 (335)
-+|..|+.+.+ +++||+++.= . +.++...+++ .|- +.+.+ |.-.....
T Consensus 204 ~~w~~i~~lr~~~~~PvivK~v-~-~~e~A~~a~~---~Ga------------------------D~I~vsn~GG~~~d~ 254 (352)
T 3sgz_A 204 FCWNDLSLLQSITRLPIILKGI-L-TKEDAELAMK---HNV------------------------QGIVVSNHGGRQLDE 254 (352)
T ss_dssp CCHHHHHHHHHHCCSCEEEEEE-C-SHHHHHHHHH---TTC------------------------SEEEECCGGGTSSCS
T ss_pred CCHHHHHHHHHhcCCCEEEEec-C-cHHHHHHHHH---cCC------------------------CEEEEeCCCCCccCC
Confidence 56778888875 5899999843 4 6766655543 243 23333 21111111
Q ss_pred CccCCCchHHHHHHHHC-CCCCeecCCCCCChHHHHHHHHcCCcEEE--eccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 171 PYHDINLNVIHTLRSRY-PDIPIGYSGHENGVHVCYAAVAMGAQIIE--KHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 171 ~~~~~nL~~i~~L~~~f-p~~pVG~SdHt~g~~~~~aAvalGA~vIE--kH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
....+..+..+++.. +++||..++--....-...|+++||+.+- +-|-..-...|++ --.+-++.+.++++
T Consensus 255 --~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~----gv~~~l~~l~~el~ 328 (352)
T 3sgz_A 255 --VSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGED----GVKEVLDILTAELH 328 (352)
T ss_dssp --SCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred --CccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcH----HHHHHHHHHHHHHH
Confidence 224566777776544 35888555444434445568899999433 2111000001110 00124556666777
Q ss_pred HHHHHhCCC
Q psy17999 248 DIEQSLGSP 256 (335)
Q Consensus 248 ~~~~alG~~ 256 (335)
..-..+|..
T Consensus 329 ~~m~~~G~~ 337 (352)
T 3sgz_A 329 RCMTLSGCQ 337 (352)
T ss_dssp HHHHHHTCS
T ss_pred HHHHHhCCC
Confidence 777777753
No 456
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=63.63 E-value=22 Score=27.90 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~ 124 (335)
.....|.+..++.|..+....-..+.++.+.+..++++-+.- .+++-+.+++.+.+. +.|||+-|+.. +.+.+..
T Consensus 14 ~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~-~~~~~~~ 92 (155)
T 1qkk_A 14 DLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG-DIPMAVQ 92 (155)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG-GHHHHHH
T ss_pred HHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC-ChHHHHH
Confidence 445566677777898876443334445555555677776653 356678889888764 68999999987 6666555
Q ss_pred HH
Q psy17999 125 IY 126 (335)
Q Consensus 125 Av 126 (335)
++
T Consensus 93 ~~ 94 (155)
T 1qkk_A 93 AI 94 (155)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 457
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=63.46 E-value=26 Score=26.12 Aligned_cols=41 Identities=10% Similarity=0.196 Sum_probs=29.9
Q ss_pred chHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEec
Q psy17999 177 LNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKH 218 (335)
Q Consensus 177 L~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH 218 (335)
+..+..|++.+|++|| .+|++.. ......|...||. +|.|-
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~KP 105 (124)
T 1srr_A 63 IEILKRMKVIDENIRVIIMTAYGE-LDMIQESKELGALTHFAKP 105 (124)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCC-HHHHHHHHHHTCCCEEESS
T ss_pred HHHHHHHHHhCCCCCEEEEEccCc-hHHHHHHHhcChHhhccCC
Confidence 5667888888888988 4677654 4455667888987 88864
No 458
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=63.39 E-value=46 Score=25.88 Aligned_cols=78 Identities=8% Similarity=0.013 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHH-cCCceEeccCCh-hhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHH
Q psy17999 48 QEEYVMLQQCADQ-VDIMFTASAMDQ-VSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEH 121 (335)
Q Consensus 48 ~e~~~~L~~~~~~-~Gi~f~stpfd~-~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~E 121 (335)
......|.+..++ .|..++.+..+. +.++.+.+..++++-+.- .+.+-+.+++.+.+. ..|||+-|+.. +.+.
T Consensus 15 ~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~ 93 (153)
T 3cz5_A 15 PIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ-GSAF 93 (153)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC-SHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC-CHHH
Confidence 3445566677776 788877555554 445777777788877753 355678899998875 67999999888 7666
Q ss_pred HHHHH
Q psy17999 122 VDNIY 126 (335)
Q Consensus 122 i~~Av 126 (335)
+..++
T Consensus 94 ~~~~~ 98 (153)
T 3cz5_A 94 ALKAF 98 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 459
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=63.26 E-value=90 Score=28.49 Aligned_cols=154 Identities=12% Similarity=0.059 Sum_probs=0.0
Q ss_pred HhhcCCHHHHHHHHHHHHHc---CCceEeccCC------hhhHHHHHhCCCCEEEEcCCCC---CCHHHHHHHHh----c
Q psy17999 42 QHLEFSQEEYVMLQQCADQV---DIMFTASAMD------QVSFDFLLSANVPFIKIGSGDS---NNIPLIKYAAS----K 105 (335)
Q Consensus 42 ~~~el~~e~~~~L~~~~~~~---Gi~f~stpfd------~~svd~l~~l~v~~~KIaS~d~---~n~~LL~~~a~----~ 105 (335)
+...|+.++..++.+.+.+. .+++++-+-+ .+....++++|+|.+-+...-. +.-.++++... +
T Consensus 47 E~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 47 ESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Q ss_pred CCcEEE-----eCCCCCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchH
Q psy17999 106 QKPLII-----STGMLPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNV 179 (335)
Q Consensus 106 gkPvil-----StG~~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~ 179 (335)
++||+| -||..++.+.+.+.++ +.+ -.- +...-|+..
T Consensus 127 ~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivgi------------------------------------K~s~gd~~~ 169 (292)
T 2ojp_A 127 DLPQILYNVPSRTGCDLLPETVGRLAK-VKNIIGI------------------------------------XEATGNLTR 169 (292)
T ss_dssp SSCEEEECCHHHHSCCCCHHHHHHHHT-STTEEEC-------------------------------------CCSCCTHH
T ss_pred CCCEEEEeCcchhccCCCHHHHHHHHc-CCCEEEE------------------------------------eCCCCCHHH
Q ss_pred HHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 180 IHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 180 i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
+..+++..|+--..||++ ......+.++||+ +|= -.+.+-|+.+.+|.+.+++
T Consensus 170 ~~~~~~~~~~~f~v~~G~---d~~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~~ 223 (292)
T 2ojp_A 170 VNQIKELVSDDFVLLSGD---DASALDFMQYGGHGVIS-------------VTANVAARDMAQMCKLAAE 223 (292)
T ss_dssp HHHHHTTSCTTSBCEESC---GGGHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEECc---HHHHHHHHHCCCcEEEe-------------CHHHhhHHHHHHHHHHHHC
No 460
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=62.98 E-value=27 Score=35.40 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+..++|++.|+++|+.++.. +.++...++++|.+-++..|+. ...++++-..++-|-+|+. |++|+..|.+
T Consensus 56 ~~a~~l~~l~~~~~v~liIN----D~~dlA~~~gAdGVHLgq~dl~-~~~ar~~lg~~~iiG~S~h---t~eea~~A~~ 126 (540)
T 3nl6_A 56 EEALQIKELCHAHNVPLIIN----DRIDVAMAIGADGIHVGQDDMP-IPMIRKLVGPDMVIGWSVG---FPEEVDELSK 126 (540)
T ss_dssp HHHHHHHHHHHHTTCCEEEC----SCSHHHHHTTCSEEEECTTSSC-HHHHHHHHCTTSEEEEEEC---SHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEe----CcHHHHHHcCCCEEEEChhhcC-HHHHHHHhCCCCEEEEECC---CHHHHHHHHH
Confidence 34567888999999999985 2567888899999999999985 5566666555666777774 8999888764
No 461
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=62.94 E-value=18 Score=33.71 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=32.7
Q ss_pred HHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 75 FDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
++++.+.|++.+-+..+ .++. ..+++.+.+ .+.|||..+|.. +.+|..+-.+...+ |..
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~-~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCE-STQATVEMTVSMAQVGAD 111 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCS-SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCC-CHHHHHHHHHHHHHcCCC
Confidence 34444555665544332 1222 134554444 257999999977 67766666666665 543
No 462
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=62.89 E-value=12 Score=38.15 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHcC--CceEeccCChhhHHHHHh---CCCCEEEEcCCCCC------CHH-----HHHHHHhcCCcEE
Q psy17999 47 SQEEYVMLQQCADQVD--IMFTASAMDQVSFDFLLS---ANVPFIKIGSGDSN------NIP-----LIKYAASKQKPLI 110 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G--i~f~stpfd~~svd~l~~---l~v~~~KIaS~d~~------n~~-----LL~~~a~~gkPvi 110 (335)
+.++..+++++.++.| +.+++-.-..++++-+.+ . .|.+-||-+|+. ..| +++++.+.|||||
T Consensus 266 ~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~-sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi 344 (550)
T 3gr4_A 266 KASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEA-SDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVI 344 (550)
T ss_dssp SHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH-SSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHh-CCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 4677777777776654 667777777777654433 3 688888877763 333 4555667899999
Q ss_pred EeCCC--------CCCHHHHHHHHHHHHhcCC
Q psy17999 111 ISTGM--------LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 111 lStG~--------~~tl~Ei~~Av~~i~~g~~ 134 (335)
+.|-| .||-.|+-.+++.+..|..
T Consensus 345 ~ATQMLeSMi~~p~PTRAEvsDVanAvldG~D 376 (550)
T 3gr4_A 345 CATQMLESMIKKPRPTRAEGSDVANAVLDGAD 376 (550)
T ss_dssp EESSTTGGGGTCSSCCHHHHHHHHHHHHHTCS
T ss_pred EEehhhHHhhcCCCccHHHHHHHHHHHHcCCc
Confidence 87665 3699999999998887643
No 463
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=62.77 E-value=53 Score=32.55 Aligned_cols=118 Identities=14% Similarity=0.054 Sum_probs=62.3
Q ss_pred hhHHHHHhCCCCEEEEcCCCCCC---HHHHHHHHhc--C-CcEEEeCCCCCCHHHHHHHHHHHHhcCCCCceeecccCCC
Q psy17999 73 VSFDFLLSANVPFIKIGSGDSNN---IPLIKYAASK--Q-KPLIISTGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYP 146 (335)
Q Consensus 73 ~svd~l~~l~v~~~KIaS~d~~n---~~LL~~~a~~--g-kPvilStG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~ 146 (335)
+.++.+.+.|++++-|...+-.. +..++.+.+. + .|||+.+.+ +.++.+.+++. |.. ++.. |..
T Consensus 245 e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~--t~~~a~~l~~a---Gad---~I~V--g~~ 314 (503)
T 1me8_A 245 ERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIV--DGEGFRYLADA---GAD---FIKI--GIG 314 (503)
T ss_dssp HHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEEC--SHHHHHHHHHH---TCS---EEEE--CSS
T ss_pred HHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecccc--CHHHHHHHHHh---CCC---eEEe--ccc
Confidence 33666777799999885543333 3344555544 5 788876654 46666655442 432 2222 222
Q ss_pred CCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCC--------CCCeecCCCCCChHHHHHHHHcCCc
Q psy17999 147 TPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYP--------DIPIGYSGHENGVHVCYAAVAMGAQ 213 (335)
Q Consensus 147 ~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp--------~~pVG~SdHt~g~~~~~aAvalGA~ 213 (335)
.+ . ||++-+-+......+..+..+.+..+ ++||.-++--....-...|.++||+
T Consensus 315 ~g---------~----~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~ 376 (503)
T 1me8_A 315 GG---------S----ICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGAD 376 (503)
T ss_dssp CS---------T----TCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCS
T ss_pred CC---------c----CcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCC
Confidence 11 1 34443222222234444544433211 4788655544445555679999998
No 464
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=62.73 E-value=21 Score=28.58 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCceEeccCC-hhhHHHHHhCCCCEEEEc--CCCCCCHHHHHHHHhcCCcEEEeCCCC
Q psy17999 53 MLQQCADQVDIMFTASAMD-QVSFDFLLSANVPFIKIG--SGDSNNIPLIKYAASKQKPLIISTGML 116 (335)
Q Consensus 53 ~L~~~~~~~Gi~f~stpfd-~~svd~l~~l~v~~~KIa--S~d~~n~~LL~~~a~~gkPvilStG~~ 116 (335)
.|.++.++.|..++.+.-+ .++++.+.+..+|++-+- =.+++-+++++++.+.+.|||+-||.+
T Consensus 23 ~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~~ 89 (123)
T 2lpm_A 23 LIEDTLCELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYG 89 (123)
T ss_dssp HHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTTC
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecCc
Confidence 4555667789887766655 566788888778876543 347788999999999999999999976
No 465
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=62.70 E-value=92 Score=28.39 Aligned_cols=151 Identities=19% Similarity=0.208 Sum_probs=95.4
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCC---CCCHHHHHH---HHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGD---SNNIPLIKY---AAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d---~~n~~LL~~---~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-+ .++++ .++++|+|.+-+...- .+.-.++++ +|+ +++
T Consensus 48 ~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 127 (289)
T 2yxg_A 48 PTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINL 127 (289)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 459999999998887752 3777766544 34444 4556899988775543 244445544 554 689
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+|= ||...+.+.+.+.++- .+ +++-+-= ..-|+..+..
T Consensus 128 PiilYn~P~~tg~~l~~~~~~~La~~----~p-----------------------nivgiK~--------s~gd~~~~~~ 172 (289)
T 2yxg_A 128 PIVLYNVPSRTAVNLEPKTVKLLAEE----YS-----------------------NISAVKE--------ANPNLSQVSE 172 (289)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHH----CT-----------------------TEEEEEE--------CCSCTHHHHH
T ss_pred CEEEEeCccccCcCCCHHHHHHHHHh----CC-----------------------CEEEEEe--------CCCCHHHHHH
Confidence 99994 6887788888876521 12 3322221 1246777888
Q ss_pred HHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+++.. +..| ||++. .....+.++||+ +|= -.+.+-|+.+.+|.+.++
T Consensus 173 ~~~~~-~f~v-~~G~d---~~~~~~l~~G~~G~is-------------~~~n~~P~~~~~l~~a~~ 220 (289)
T 2yxg_A 173 LIHDA-KITV-LSGND---ELTLPIIALGGKGVIS-------------VVANIVPKEFVEMVNYAL 220 (289)
T ss_dssp HHHHT-CSEE-EESCG---GGHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHhC-CeEE-EECcH---HHHHHHHHCCCCEEEe-------------ChhhhhHHHHHHHHHHHH
Confidence 87765 5555 66653 234457789987 554 223356888888876654
No 466
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=62.68 E-value=47 Score=25.90 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=39.9
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcC-Cc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMG-AQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRD 248 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalG-A~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~ 248 (335)
.+..+..|++.+|++|| .++++.. ......|+..| |. +|.|- +++++|...++.+-.
T Consensus 73 g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~~l~KP---------------~~~~~l~~~i~~~l~ 132 (153)
T 3hv2_A 73 GPTLLARIHQQYPSTTRILLTGDPD-LKLIAKAINEGEIYRYLSKP---------------WDDQELLLALRQALE 132 (153)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCCC-HHHHHHHHHTTCCSEEECSS---------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHCCCCeEEEEECCCC-HHHHHHHHhCCCcceEEeCC---------------CCHHHHHHHHHHHHH
Confidence 46778889999989998 4566554 45556788899 76 87763 246677777765543
No 467
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=62.64 E-value=61 Score=29.48 Aligned_cols=85 Identities=14% Similarity=0.139 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCC-----
Q psy17999 49 EEYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLP----- 117 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~----- 117 (335)
+-+..+.+.|++.|..++... .|.+ .++.+.+.++|.+-+.+.+.. .+.++.+.+.+.|+++--....
T Consensus 83 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~~~~~~~ 161 (348)
T 3bil_A 83 AMVTEIQSTASKAGLATIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRELPGDSTI 161 (348)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSCCSCC-CC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEcccCCCCCCC
Confidence 445667788999998776543 3332 245556678999888776654 4788888888999876422110
Q ss_pred ------CHHHHHHHHHHHHh-cCC
Q psy17999 118 ------SIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 118 ------tl~Ei~~Av~~i~~-g~~ 134 (335)
..+-...|++++.+ |..
T Consensus 162 ~~V~~D~~~~~~~a~~~L~~~G~~ 185 (348)
T 3bil_A 162 PTATSNPQPGIAAAVELLAHNNAL 185 (348)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCC
T ss_pred CEEEeChHHHHHHHHHHHHHCCCC
Confidence 12445678888876 655
No 468
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=62.57 E-value=19 Score=33.72 Aligned_cols=83 Identities=13% Similarity=0.173 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHcCCceEecc--CChhh----HHHHHhCCCCEEEEcCCCC------CCHHHHHHHHh---cCCcEEEe
Q psy17999 48 QEEYVMLQQCADQVDIMFTASA--MDQVS----FDFLLSANVPFIKIGSGDS------NNIPLIKYAAS---KQKPLIIS 112 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stp--fd~~s----vd~l~~l~v~~~KIaS~d~------~n~~LL~~~a~---~gkPvilS 112 (335)
.+++..+++.|....+.++... .+.+. .....++|+||+|-..+-. .+..|++++.+ .+.||..|
T Consensus 161 ~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAA 240 (288)
T 3oa3_A 161 FQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKAS 240 (288)
T ss_dssp HHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEE
T ss_pred HHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 3677888888877556655433 44444 3556679999999986522 36788888863 56899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC
Q psy17999 113 TGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 113 tG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
=|.. |.+ +|++++..|..
T Consensus 241 GGIr-t~e---dAl~mi~aGA~ 258 (288)
T 3oa3_A 241 GGIR-TIE---DCVKMVRAGAE 258 (288)
T ss_dssp SSCC-SHH---HHHHHHHTTCS
T ss_pred CCCC-CHH---HHHHHHHcCCc
Confidence 9999 875 45555655543
No 469
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=62.47 E-value=20 Score=31.11 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=48.3
Q ss_pred CCceEeccCChhhHHHHHhCCCCEEEEcCC---C------CCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 62 DIMFTASAMDQVSFDFLLSANVPFIKIGSG---D------SNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 62 Gi~f~stpfd~~svd~l~~l~v~~~KIaS~---d------~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
|+.+..++.+.+.+..+.+.|+|++-+++. . ...+.+++++.+ .+.||+..=|. +.+.+..+++
T Consensus 110 ~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI--~~~nv~~~~~ 183 (221)
T 1yad_A 110 HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM--TPDRLRDVKQ 183 (221)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC--CGGGHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC--CHHHHHHHHH
Confidence 788888888988888888899999999763 1 234678888765 48898887665 5677766654
No 470
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=62.46 E-value=17 Score=31.74 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCceEeccC----Chh----hHHHHHhCCCCEEEEcCCCCCCH-HHHHHHHhcCCcEEEe
Q psy17999 49 EEYVMLQQCADQVDIMFTASAM----DQV----SFDFLLSANVPFIKIGSGDSNNI-PLIKYAASKQKPLIIS 112 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpf----d~~----svd~l~~l~v~~~KIaS~d~~n~-~LL~~~a~~gkPvilS 112 (335)
+-+..+.+.+++.|..+..... +.+ .++.+.+-++|.+-+.+.+.... +.++.+.+.+.|+++-
T Consensus 24 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~ 96 (289)
T 3brs_A 24 VLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVI 96 (289)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEE
Confidence 3466778889999988776433 432 34555667899998887776553 7888888889998764
No 471
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=62.45 E-value=28 Score=32.43 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCC-------------CCCHHHHHH---HHh-cCCcEEEe-
Q psy17999 51 YVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGD-------------SNNIPLIKY---AAS-KQKPLIIS- 112 (335)
Q Consensus 51 ~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d-------------~~n~~LL~~---~a~-~gkPvilS- 112 (335)
-..|++.-++.+..++.++||.-++..+++.|++++-++|.- ++--.++.. +++ +.+|||..
T Consensus 10 ~~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~ 89 (287)
T 3b8i_A 10 RAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADA 89 (287)
T ss_dssp HHHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 345666666778999999999999999999999999998762 222334433 333 57898875
Q ss_pred -CCCCCCHHHHHHHHHHHHh-cCC
Q psy17999 113 -TGMLPSIEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 113 -tG~~~tl~Ei~~Av~~i~~-g~~ 134 (335)
+|-+ +.+++.+.+..+.+ |-.
T Consensus 90 d~Gyg-~~~~~~~~v~~l~~aGa~ 112 (287)
T 3b8i_A 90 DHGYG-NALNVMRTVVELERAGIA 112 (287)
T ss_dssp TTCSS-SHHHHHHHHHHHHHHTCS
T ss_pred CCCCC-CHHHHHHHHHHHHHhCCe
Confidence 7866 88888887777666 643
No 472
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=62.33 E-value=24 Score=33.04 Aligned_cols=74 Identities=11% Similarity=0.095 Sum_probs=55.0
Q ss_pred HHHHHHHH--cCCceEeccCChhhHHHHHhCCCCEEEEcCC----C---------------------------------C
Q psy17999 53 MLQQCADQ--VDIMFTASAMDQVSFDFLLSANVPFIKIGSG----D---------------------------------S 93 (335)
Q Consensus 53 ~L~~~~~~--~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~----d---------------------------------~ 93 (335)
.+.+++++ .|+.|++++.+.+.+....+.|++++-+... + -
T Consensus 114 ~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~ 193 (297)
T 4adt_A 114 DEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLR 193 (297)
T ss_dssp CSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHT
T ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCC
Confidence 34455555 6889999999988888888889999988632 1 3
Q ss_pred CCHHHHHHHHhc-CCcEE--EeCCCCCCHHHHHHHHH
Q psy17999 94 NNIPLIKYAASK-QKPLI--ISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 94 ~n~~LL~~~a~~-gkPvi--lStG~~~tl~Ei~~Av~ 127 (335)
..+.+++++.+. +.||+ -.-|.+ +.+++..+.+
T Consensus 194 ~~~~ll~~i~~~~~iPVivvA~GGI~-t~~dv~~~~~ 229 (297)
T 4adt_A 194 APIDLILLTRKLKRLPVVNFAAGGIA-TPADAAMCMQ 229 (297)
T ss_dssp CCHHHHHHHHHHTSCSSEEEEESCCC-SHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCeEEEecCCCC-CHHHHHHHHH
Confidence 567888888764 78987 466677 9998887654
No 473
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=62.31 E-value=41 Score=25.48 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=29.9
Q ss_pred CchHHHHHHH--HCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEec
Q psy17999 176 NLNVIHTLRS--RYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKH 218 (335)
Q Consensus 176 nL~~i~~L~~--~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH 218 (335)
.+..+..+++ .+|++|| .++++.. ......+..+||. +|.|-
T Consensus 69 g~~~~~~l~~~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kP 114 (143)
T 3cnb_A 69 GFSICHRIKSTPATANIIVIAMTGALT-DDNVSRIVALGAETCFGKP 114 (143)
T ss_dssp HHHHHHHHHTSTTTTTSEEEEEESSCC-HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHHhCccccCCcEEEEeCCCC-HHHHHHHHhcCCcEEEeCC
Confidence 3566788887 5678887 5677654 4455678899997 78763
No 474
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=62.28 E-value=11 Score=37.45 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=27.2
Q ss_pred CCHHHHHHHH-HHHHHcCCceEeccCChhhHHHHHh
Q psy17999 46 FSQEEYVMLQ-QCADQVDIMFTASAMDQVSFDFLLS 80 (335)
Q Consensus 46 l~~e~~~~L~-~~~~~~Gi~f~stpfd~~svd~l~~ 80 (335)
++.+++..+. +.+++++|.++-.||++++.+-..+
T Consensus 281 ~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~ 316 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSA 316 (452)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHH
Confidence 5666666554 6799999999999999988765544
No 475
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=62.20 E-value=11 Score=32.70 Aligned_cols=63 Identities=6% Similarity=-0.032 Sum_probs=46.4
Q ss_pred cCCceEeccCChhhHHHHHhCCCCEEEEcCC----------CCCCHHHHHHHHh---cCCcEEEeCCCCCCHHHHHHHH
Q psy17999 61 VDIMFTASAMDQVSFDFLLSANVPFIKIGSG----------DSNNIPLIKYAAS---KQKPLIISTGMLPSIEHVDNIY 126 (335)
Q Consensus 61 ~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~----------d~~n~~LL~~~a~---~gkPvilStG~~~tl~Ei~~Av 126 (335)
.++.+..++.+.+.+..+. +|+|+++++.- ....+.+|+.+.+ .+.||+..=|.. .+.+..++
T Consensus 87 ~~~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~--~~nv~~~~ 162 (210)
T 3ceu_A 87 YAGHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN--EDNLLEIK 162 (210)
T ss_dssp CCSEEEEEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC--TTTHHHHH
T ss_pred cCCEEEEecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC--HHHHHHHH
Confidence 4777888889988887777 89999997552 2357889999887 489998865554 55555544
No 476
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=62.20 E-value=38 Score=25.76 Aligned_cols=74 Identities=5% Similarity=0.065 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHh----cCCcEEEeCCCCCCHH
Q psy17999 47 SQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAAS----KQKPLIISTGMLPSIE 120 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~----~gkPvilStG~~~tl~ 120 (335)
.......|.+..++.|..+.+..-..+.++.+.+..+|++-+.. .+.+-+.+++++.+ ...|||+-|+.. +.+
T Consensus 15 ~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~ 93 (140)
T 3grc_A 15 DPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA-REG 93 (140)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH-HHH
T ss_pred CHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC-ChH
Confidence 34455667777788898865555555667888888788887754 36777899999876 368999999866 443
Q ss_pred H
Q psy17999 121 H 121 (335)
Q Consensus 121 E 121 (335)
+
T Consensus 94 ~ 94 (140)
T 3grc_A 94 E 94 (140)
T ss_dssp H
T ss_pred H
Confidence 3
No 477
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.13 E-value=22 Score=36.31 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=37.7
Q ss_pred HHHHHhCCCCEEEEcCC--------------CCCCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHH
Q psy17999 75 FDFLLSANVPFIKIGSG--------------DSNNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYT 127 (335)
Q Consensus 75 vd~l~~l~v~~~KIaS~--------------d~~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~ 127 (335)
+..|++.|++++-+..+ ...++++++++.+ .+.|||..-|.. |.++.+++++
T Consensus 234 a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~-~~~~a~~~l~ 300 (671)
T 1ps9_A 234 AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRIN-DPQVADDILS 300 (671)
T ss_dssp HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCC-SHHHHHHHHH
T ss_pred HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCC-CHHHHHHHHH
Confidence 45667789999987522 1235678888766 488999988888 8888877654
No 478
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=62.07 E-value=46 Score=24.77 Aligned_cols=78 Identities=12% Similarity=0.120 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHcCCceEeccCC-hhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMD-QVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIEH 121 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd-~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~E 121 (335)
.....|....++.|...+.+..+ .+.++.+.+..++++-+.- .+++-+.+++++.+. ..|||+-|+.. +.+.
T Consensus 17 ~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~ 95 (129)
T 1p6q_A 17 TSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG-DRAL 95 (129)
T ss_dssp HHHHHHHHHHHTTTCSCEECCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC-CHHH
T ss_pred HHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC-CHHH
Confidence 44455666667778743444444 4556777776678776543 355678899998763 57899999988 7776
Q ss_pred HHHHHH
Q psy17999 122 VDNIYT 127 (335)
Q Consensus 122 i~~Av~ 127 (335)
...+++
T Consensus 96 ~~~~~~ 101 (129)
T 1p6q_A 96 VQKAAA 101 (129)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 479
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=61.74 E-value=18 Score=36.51 Aligned_cols=135 Identities=15% Similarity=0.148 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHcCCceE--eccCCh-----------hhHHHHHhCCCCEEEEcCCCCC-------------CHHHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFT--ASAMDQ-----------VSFDFLLSANVPFIKIGSGDSN-------------NIPLIKYAA 103 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~--stpfd~-----------~svd~l~~l~v~~~KIaS~d~~-------------n~~LL~~~a 103 (335)
.+..+.+.+++..+++. --.-+. +.++.+.+.|++.+-|+|..+. |..++++++
T Consensus 315 ~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~ 394 (555)
T 1jvn_A 315 MLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETIS 394 (555)
T ss_dssp HHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHH
Confidence 46667788887888776 223333 4478888899999999998754 578999988
Q ss_pred hc-CC-cEEEeCCCC------------------------------------------CCHHHHHHHHHHHHh-cCCCCce
Q psy17999 104 SK-QK-PLIISTGML------------------------------------------PSIEHVDNIYTTVKQ-YHSNLSI 138 (335)
Q Consensus 104 ~~-gk-PvilStG~~------------------------------------------~tl~Ei~~Av~~i~~-g~~~~~~ 138 (335)
+. |. -|++|.-.. .+..|+.+. +.+ |.
T Consensus 395 ~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~---~~~~Ga----- 466 (555)
T 1jvn_A 395 KAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRA---CEALGA----- 466 (555)
T ss_dssp HHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHH---HHHTTC-----
T ss_pred HHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHH---HHHcCC-----
Confidence 74 42 355553210 012233222 223 33
Q ss_pred eecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHH-cCCc
Q psy17999 139 LHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVA-MGAQ 213 (335)
Q Consensus 139 ~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAva-lGA~ 213 (335)
..+++|+.+.=-+- .-.|+..+..+++.. ++||..|+-.....-...+.. .||+
T Consensus 467 -------------------~~il~t~~~~dG~~-~G~d~~li~~l~~~~-~iPVIasGGi~s~~d~~~~~~~~G~~ 521 (555)
T 1jvn_A 467 -------------------GEILLNCIDKDGSN-SGYDLELIEHVKDAV-KIPVIASSGAGVPEHFEEAFLKTRAD 521 (555)
T ss_dssp -------------------CEEEECCGGGTTTC-SCCCHHHHHHHHHHC-SSCEEECSCCCSHHHHHHHHHHSCCS
T ss_pred -------------------CEEEEeCCCCCCCC-CCCCHHHHHHHHHhC-CccEEEECCCCCHHHHHHHHHhcCCh
Confidence 34567776432221 236899999999988 899999887666565555655 7887
No 480
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=61.73 E-value=6.2 Score=37.48 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=40.7
Q ss_pred CCCCCeecCCCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 187 YPDIPIGYSGHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 187 fp~~pVG~SdHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
.|++|| |.. ...+++|...||.|+=-|.--. .|...|++|+-|+++++.||+.
T Consensus 24 ~P~lPv-----TpeEia~~A~~~~~AGAaivHlHvRdp-----~dG~ps~d~~~y~e~i~~IR~~ 78 (314)
T 3lot_A 24 SPYLPV-----TPDQIVEEAVKAAEAGAGMVHIHARDP-----KDGRPTTDVEVFRYICREIKKQ 78 (314)
T ss_dssp CTTSCC-----SHHHHHHHHHHHHHHTCSEEEECEECT-----TTCCEECCHHHHHHHHHHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHHHcCCCEEEEeecCC-----CCCCcCCCHHHHHHHHHHHHhc
Confidence 456666 443 4557889999999999997631 1566789999999999999983
No 481
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=61.72 E-value=70 Score=28.60 Aligned_cols=65 Identities=12% Similarity=0.046 Sum_probs=38.4
Q ss_pred HHHHHhcCCcEEEeCC-C-CCCHHHHHHHHHHHHh-cCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCC
Q psy17999 99 IKYAASKQKPLIISTG-M-LPSIEHVDNIYTTVKQ-YHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDI 175 (335)
Q Consensus 99 L~~~a~~gkPvilStG-~-~~tl~Ei~~Av~~i~~-g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~ 175 (335)
++.+.+.|+||++=+| . . ... ..++.+++ +.. ..++++.||.+. .
T Consensus 157 ~~lA~~~~~pv~iH~~~~~~-~~~---~~~~~l~~~~~~---------------------~~~~~i~H~~~~-------~ 204 (314)
T 2vc7_A 157 AIANKETKVPIITHSNAHNN-TGL---EQQRILTEEGVD---------------------PGKILIGHLGDT-------D 204 (314)
T ss_dssp HHHHHHHCCCEEEECCTTTT-HHH---HHHHHHHHTTCC---------------------GGGEEETTGGGC-------C
T ss_pred HHHHHHHCCEEEEeCCCccc-ChH---HHHHHHHHcCCC---------------------cccEEEECCCCC-------C
Confidence 3334567999999887 2 2 222 44455554 322 016789999872 2
Q ss_pred CchHHHHHHHHCCCCCeecCCC
Q psy17999 176 NLNVIHTLRSRYPDIPIGYSGH 197 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pVG~SdH 197 (335)
++..+..+.+ . ++-|+++.+
T Consensus 205 ~~~~~~~~~~-~-G~~i~~~~~ 224 (314)
T 2vc7_A 205 NIDYIKKIAD-K-GSFIGLDRY 224 (314)
T ss_dssp CHHHHHHHHH-T-TCEEEECCT
T ss_pred CHHHHHHHHH-c-CCEEEEeCC
Confidence 3455666655 3 677888753
No 482
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=61.71 E-value=21 Score=26.77 Aligned_cols=73 Identities=8% Similarity=0.088 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc----CCcEEEeCCCCCCHHH
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK----QKPLIISTGMLPSIEH 121 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~----gkPvilStG~~~tl~E 121 (335)
......|.+..++.|..+.+..-..+.++.+.+..++++-+.- .+.+-+.+++++.+. ..|||+-|+.. +.+.
T Consensus 13 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~ 91 (127)
T 3i42_A 13 QAAAETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA-KNDL 91 (127)
T ss_dssp HHHHHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC--CTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc-chhH
Confidence 3455667777888888776655556667888887788877654 467778999999874 57999999877 5544
No 483
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=61.67 E-value=46 Score=31.92 Aligned_cols=121 Identities=12% Similarity=0.138 Sum_probs=65.6
Q ss_pred CCCCcEEEeeccc---ccccccccccCCCCCC-CCCCcc-cHHHHHHhhcCCHHHHHHHHHHHHHcCCceEeccCC----
Q psy17999 1 ECGADCVKFQKSC---LSTKFTQSALDRPYLS-PHAWAN-TYGQHKQHLEFSQEEYVMLQQCADQVDIMFTASAMD---- 71 (335)
Q Consensus 1 ~aGaDaVKFQ~~~---~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~stpfd---- 71 (335)
++|.|+|++---. .+.+++... + .. ...||. + +.++..|..|-.+.+++.+...-|.+=.++++
T Consensus 186 ~aGfDgVEih~a~GYLl~QFlsp~~-N---~R~~D~yGG~s---lenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 186 KAGFDGVEIHGANGYLLDAFFRESS-N---KRQSGPYAGTT---IDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp TSCCSEEEEEECTTSHHHHHHSTTT-C---CCCSSTTCTTS---HHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred hcCCCEEEEcCcCchHHhhccCCCC-C---ccccCCCCccC---hhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 5899999976421 122222221 0 00 112443 3 23445677777777777764321333334432
Q ss_pred ------h----hhHHHHHhCCCCEEEEcCCCC----CCHHHHHHHHh-cCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Q psy17999 72 ------Q----VSFDFLLSANVPFIKIGSGDS----NNIPLIKYAAS-KQKPLIISTGMLPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 72 ------~----~svd~l~~l~v~~~KIaS~d~----~n~~LL~~~a~-~gkPvilStG~~~tl~Ei~~Av~~i~~g~~ 134 (335)
. +-+..|+++|++++-+..+.. ...+ ++.+.+ .+.|||..-|. |.++.+++ |..|..
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~i--t~~~a~~~---l~~g~a 330 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRY--DFEEADQQ---IREGKV 330 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSC--CHHHHHHH---HHTTSC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCC--CHHHHHHH---HHcCCC
Confidence 1 224566788999999987542 1225 666665 47898876554 66655544 555433
No 484
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=61.59 E-value=50 Score=24.98 Aligned_cols=77 Identities=13% Similarity=-0.006 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcC--CCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHHHHH
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGS--GDSNNIPLIKYAASK--QKPLIISTGMLPSIEHVDN 124 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS--~d~~n~~LL~~~a~~--gkPvilStG~~~tl~Ei~~ 124 (335)
.....|....++.|..+....-..+.++.+.+..+|++-+.- .+++-+.+++.+.+. +.|+|+-|+.. +.+....
T Consensus 14 ~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~ 92 (132)
T 3crn_A 14 AILDSTKQILEFEGYEVEIAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA-SLENSVF 92 (132)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC-CHHHHHH
T ss_pred HHHHHHHHHHHHCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc-cHHHHHH
Confidence 334455666667788776444445667777777788776653 356678899988764 67999999988 7766655
Q ss_pred HH
Q psy17999 125 IY 126 (335)
Q Consensus 125 Av 126 (335)
++
T Consensus 93 ~~ 94 (132)
T 3crn_A 93 SL 94 (132)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 485
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=61.53 E-value=41 Score=30.10 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=57.5
Q ss_pred CCHHHHHHHHHHHHHcCCceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCC---CCCCHHHH
Q psy17999 46 FSQEEYVMLQQCADQVDIMFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTG---MLPSIEHV 122 (335)
Q Consensus 46 l~~e~~~~L~~~~~~~Gi~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG---~~~tl~Ei 122 (335)
+...++.++.+.|.++|+..+..+-+....+.+..++.+++=+-..++ +.|| ..++.+++
T Consensus 101 ~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~iIayep~wa-----------------iGtG~~v~t~~~d~~ 163 (225)
T 1hg3_A 101 MILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAALNPDYVAVEPPEL-----------------IGTGIPVSKAKPEVI 163 (225)
T ss_dssp CBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEECCTTT-----------------TTTSCCTTTSCTHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCEEEEeChhh-----------------hccCCCCCCCChhHH
Confidence 666789999999999999999999999888776666544443333221 3466 23388888
Q ss_pred HHHHHHHHh-cCCCCceeecccCCC
Q psy17999 123 DNIYTTVKQ-YHSNLSILHCVSAYP 146 (335)
Q Consensus 123 ~~Av~~i~~-g~~~~~~~~c~~g~~ 146 (335)
..+.+.++. -.. -.+++++|+.
T Consensus 164 ~~~~~~ir~~~~~--~~ilyggsV~ 186 (225)
T 1hg3_A 164 TNTVELVKKVNPE--VKVLCGAGIS 186 (225)
T ss_dssp HHHHHHHHHHCTT--SEEEEESSCC
T ss_pred HHHHHHHHhccCC--CEEEEeCCCC
Confidence 888887776 222 3566666665
No 486
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=61.51 E-value=1.1e+02 Score=28.94 Aligned_cols=45 Identities=22% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCCchHHHHHHHHCCCCCeecCCCCCChHHHHHHHHcCCcEEEe--ccC
Q psy17999 174 DINLNVIHTLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQIIEK--HFT 220 (335)
Q Consensus 174 ~~nL~~i~~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~vIEk--H~t 220 (335)
..++..|..+++.+ ++||..-. ......+..|...||+.|=- |.+
T Consensus 211 ~~~~~~i~~l~~~~-~~pv~vK~-~~~~e~a~~a~~~Gad~I~vs~~gg 257 (370)
T 1gox_A 211 SLSWKDVAWLQTIT-SLPILVKG-VITAEDARLAVQHGAAGIIVSNHGA 257 (370)
T ss_dssp TCCHHHHHHHHHHC-CSCEEEEC-CCSHHHHHHHHHTTCSEEEECCGGG
T ss_pred cchHHHHHHHHHHh-CCCEEEEe-cCCHHHHHHHHHcCCCEEEECCCCC
Confidence 45778899999998 89985311 13367778899999996654 553
No 487
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=61.50 E-value=32 Score=27.14 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=32.2
Q ss_pred CchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEecc
Q psy17999 176 NLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHF 219 (335)
Q Consensus 176 nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~ 219 (335)
.+..+..||+.+|++|| .++++.. ......|..+||. +|.|-+
T Consensus 98 g~~~~~~lr~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~KP~ 142 (157)
T 3hzh_A 98 GITCLSNIMEFDKNARVIMISALGK-EQLVKDCLIKGAKTFIVKPL 142 (157)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCC-HHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHHHHhhCCCCcEEEEeccCc-HHHHHHHHHcCCCEEEeCCC
Confidence 36778889998999998 5676654 4555678899998 888743
No 488
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=61.28 E-value=55 Score=31.69 Aligned_cols=115 Identities=15% Similarity=0.193 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHcCCceEeccC---------ChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCC-C
Q psy17999 48 QEEYVMLQQCADQVDIMFTASAM---------DQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGML-P 117 (335)
Q Consensus 48 ~e~~~~L~~~~~~~Gi~f~stpf---------d~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~-~ 117 (335)
.+.+.+|.++|+++|+.+++.+- +...+.++.++|++.+-+--+= +...+..+... +-|.-.|| .
T Consensus 49 ~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf--~~~eia~ls~n---lkIeLNASti 123 (372)
T 2p0o_A 49 RQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVTGLRMDYGI--TIEQMAHASHK---IDIGLNASTI 123 (372)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCCEEEECSSC--CHHHHHHHHTT---SEEEEETTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCCEEEEcCCC--CHHHHHHHhcC---CEEEEECccC
Confidence 36789999999999999999863 2356788999999999998775 44555555543 44555556 1
Q ss_pred CHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHHHH---HHCCCCCe-e
Q psy17999 118 SIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHTLR---SRYPDIPI-G 193 (335)
Q Consensus 118 tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~L~---~~fp~~pV-G 193 (335)
+.++++...++ +.+ .+++.. |--=||.|+--+.+.....-- +.+ ++++ .
T Consensus 124 ~~~~l~~l~~~---~~n---------------------~~~l~a--~HNFYPr~~TGLs~~~f~~~n~~~k~~-Gi~t~A 176 (372)
T 2p0o_A 124 TLEEVAELKAH---QAD---------------------FSRLEA--WHNYYPRPETGIGTTFFNEKNRWLKEL-GLQVFT 176 (372)
T ss_dssp CHHHHHHHHHT---TCC---------------------GGGEEE--ECCCCCSTTCSBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred CHHHHHHHHHc---CCC---------------------hHHeEE--eeccCCCCCCCCCHHHHHHHHHHHHHC-CCcEEE
Confidence 57778765442 221 014444 555699999778776665332 346 7887 4
Q ss_pred c
Q psy17999 194 Y 194 (335)
Q Consensus 194 ~ 194 (335)
|
T Consensus 177 F 177 (372)
T 2p0o_A 177 F 177 (372)
T ss_dssp E
T ss_pred E
Confidence 5
No 489
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=61.12 E-value=40 Score=29.44 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCceEeccCCh--------hhHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEe
Q psy17999 49 EEYVMLQQCADQVDIMFTASAMDQ--------VSFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIIS 112 (335)
Q Consensus 49 e~~~~L~~~~~~~Gi~f~stpfd~--------~svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilS 112 (335)
+-...+.+.|+++|..++....+. +.++.+.+.++|.+-+.+.+... .+.++.+. .|.||++-
T Consensus 22 ~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 22 SVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV-GNTPVFAT 93 (304)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-TTSCEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-CCCCEEEe
Confidence 345667788999998877655442 13455556689999988776652 45688888 89998875
No 490
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=61.08 E-value=18 Score=37.28 Aligned_cols=87 Identities=15% Similarity=0.239 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHHcC--CceEeccCChhhHHHHH---hCCCCEEEEcCCCCC------CHH-----HHHHHHhcCCcEE
Q psy17999 47 SQEEYVMLQQCADQVD--IMFTASAMDQVSFDFLL---SANVPFIKIGSGDSN------NIP-----LIKYAASKQKPLI 110 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G--i~f~stpfd~~svd~l~---~l~v~~~KIaS~d~~------n~~-----LL~~~a~~gkPvi 110 (335)
+.++..+++++.++.| +.+++-.-..++++-++ +. .|.+-||-+|+. ..| +++++.+.|||||
T Consensus 217 ~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi 295 (606)
T 3t05_A 217 RPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEV-SDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVI 295 (606)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH-CSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh-CCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeE
Confidence 4577777777777654 67777777777764443 34 788888877653 333 4555667899999
Q ss_pred EeCCC--------CCCHHHHHHHHHHHHhcCC
Q psy17999 111 ISTGM--------LPSIEHVDNIYTTVKQYHS 134 (335)
Q Consensus 111 lStG~--------~~tl~Ei~~Av~~i~~g~~ 134 (335)
+.|-| .||-+|+-++++.+..|..
T Consensus 296 ~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaD 327 (606)
T 3t05_A 296 TATQMLDSMQRNPRATRAEASDVANAIYDGTD 327 (606)
T ss_dssp EESSSSGGGTTCSSCCHHHHHHHHHHHHHTCS
T ss_pred EehHHHHHhhcCCCccHHHHHHHHHHHHcCCC
Confidence 96654 3699999999998887643
No 491
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=60.96 E-value=25 Score=26.90 Aligned_cols=67 Identities=25% Similarity=0.300 Sum_probs=44.2
Q ss_pred ceEEeeecCCCCCCccCCCchHHHHHHHHCCCCCe-ecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCC
Q psy17999 158 NLSILHCVSAYPTPYHDINLNVIHTLRSRYPDIPI-GYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLT 235 (335)
Q Consensus 158 ~l~llHC~s~YP~~~~~~nL~~i~~L~~~fp~~pV-G~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~ 235 (335)
+++++-. . | . .-.+..+..+++.+|++|| .++++.. ......|...||. +|.|-+ +
T Consensus 50 dlvi~d~-~--~--~-~~g~~~~~~l~~~~~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~kP~---------------~ 107 (142)
T 2qxy_A 50 DLVFVDV-F--E--G-EESLNLIRRIREEFPDTKVAVLSAYVD-KDLIINSVKAGAVDYILKPF---------------R 107 (142)
T ss_dssp SEEEEEC-T--T--T-HHHHHHHHHHHHHCTTCEEEEEESCCC-HHHHHHHHHHTCSCEEESSC---------------C
T ss_pred CEEEEeC-C--C--C-CcHHHHHHHHHHHCCCCCEEEEECCCC-HHHHHHHHHCCcceeEeCCC---------------C
Confidence 6666654 2 2 1 1235668888988988998 5677654 5556678899997 887633 3
Q ss_pred HHHHHHHHHHH
Q psy17999 236 PPELKALVTGI 246 (335)
Q Consensus 236 p~el~~lv~~i 246 (335)
+++|...++.+
T Consensus 108 ~~~l~~~i~~~ 118 (142)
T 2qxy_A 108 LDYLLERVKKI 118 (142)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55776666554
No 492
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.91 E-value=38 Score=31.86 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=46.2
Q ss_pred cCC-ceEeccCChh----------hHHHHHhCCCCEEEEcCC-----CCCC---HHHHHHHHh---cCCcEEEeCCCCCC
Q psy17999 61 VDI-MFTASAMDQV----------SFDFLLSANVPFIKIGSG-----DSNN---IPLIKYAAS---KQKPLIISTGMLPS 118 (335)
Q Consensus 61 ~Gi-~f~stpfd~~----------svd~l~~l~v~~~KIaS~-----d~~n---~~LL~~~a~---~gkPvilStG~~~t 118 (335)
.|+ ..+.|||+.+ -++++.+.|++.+-+..+ .++. ..+++.+.+ -+.|||..+|.. +
T Consensus 36 ~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~-s 114 (332)
T 2r8w_A 36 KGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGAL-R 114 (332)
T ss_dssp CEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCS-S
T ss_pred CCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-C
Confidence 354 4567888753 256677778888776533 2332 234444333 358999999987 7
Q ss_pred HHHHHHHHHHHHh-cCC
Q psy17999 119 IEHVDNIYTTVKQ-YHS 134 (335)
Q Consensus 119 l~Ei~~Av~~i~~-g~~ 134 (335)
.+|..+-.+.... |-.
T Consensus 115 t~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 115 TDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 7777766666666 644
No 493
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=60.86 E-value=33 Score=30.38 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCceEecc--CChh----hHHHHHhCCCCEEEEcCCCCCC-HHHHHHHHhcCCcEEEe
Q psy17999 50 EYVMLQQCADQVDIMFTASA--MDQV----SFDFLLSANVPFIKIGSGDSNN-IPLIKYAASKQKPLIIS 112 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~stp--fd~~----svd~l~~l~v~~~KIaS~d~~n-~~LL~~~a~~gkPvilS 112 (335)
-+..+.+.+++.|..++... .|.+ .++.+.+.++|.+-+.+.+... .+.++.+.+.+.||++-
T Consensus 20 ~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 20 ETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEe
Confidence 34567788999998776543 3432 2445555689999888776554 68889888889998764
No 494
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=60.73 E-value=1.1e+02 Score=28.48 Aligned_cols=152 Identities=17% Similarity=0.202 Sum_probs=94.9
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCC---CCCHHHHHH---HHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGD---SNNIPLIKY---AAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d---~~n~~LL~~---~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-+ .++++ .++++|+|.+-+-..- .+.-.++++ +|+ +++
T Consensus 72 ~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 151 (315)
T 3na8_A 72 AYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGV 151 (315)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 458999999999888763 3677765542 33343 5567899998886553 334445544 544 699
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+|= ||..++.+.+.+.+.. .+ +++-+--+ .-|+..+..
T Consensus 152 PiilYn~P~~tg~~l~~~~~~~L~a~----~p-----------------------nIvgiKds--------sgd~~~~~~ 196 (315)
T 3na8_A 152 PVMLYNNPGTSGIDMSVELILRIVRE----VD-----------------------NVTMVKES--------TGDIQRMHK 196 (315)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHH----ST-----------------------TEEEEEEC--------SSCHHHHHH
T ss_pred cEEEEeCcchhCcCCCHHHHHHHHhc----CC-----------------------CEEEEECC--------CCCHHHHHH
Confidence 99994 6887788777665221 22 33333322 247777888
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+.+.++ ++.| |++.. .....+.++||+ +|= -.+.+-|+.+.+|.+.++
T Consensus 197 ~~~~~~~~f~v-~~G~D---~~~l~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 246 (315)
T 3na8_A 197 LRLLGEGRVPF-YNGCN---PLALEAFVAGAKGWCS-------------AAPNLIPTLNGQLYQAVL 246 (315)
T ss_dssp HHHHTTTCSCE-EECCG---GGHHHHHHHTCSEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHcCCCEEE-EeCch---HHHHHHHHCCCCEEEe-------------chhhhCHHHHHHHHHHHh
Confidence 877764 3444 55443 234567788988 553 223456888888877654
No 495
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=60.54 E-value=7.4 Score=29.97 Aligned_cols=80 Identities=16% Similarity=0.069 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHcC-CceEeccCChhhHHHHHhCCCCEEEEc--CCCCCCHHHHHHHHhc--CCcEEEeCCCCCCHHH
Q psy17999 47 SQEEYVMLQQCADQVD-IMFTASAMDQVSFDFLLSANVPFIKIG--SGDSNNIPLIKYAASK--QKPLIISTGMLPSIEH 121 (335)
Q Consensus 47 ~~e~~~~L~~~~~~~G-i~f~stpfd~~svd~l~~l~v~~~KIa--S~d~~n~~LL~~~a~~--gkPvilStG~~~tl~E 121 (335)
.......|.+..++.| ..+.+..-..+.++.+.+..+|++-+. -.+.+-+.+++.+.+. ..|||+-|+.. +.+.
T Consensus 23 ~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~ 101 (135)
T 3snk_A 23 DPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDEL-TSEQ 101 (135)
T ss_dssp CHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCC-CHHH
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCC-CHHH
Confidence 4455667778888889 877755555566667766667776654 3456667888888765 58999999988 8777
Q ss_pred HHHHHH
Q psy17999 122 VDNIYT 127 (335)
Q Consensus 122 i~~Av~ 127 (335)
...+.+
T Consensus 102 ~~~~~~ 107 (135)
T 3snk_A 102 TRVLVR 107 (135)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776643
No 496
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=60.27 E-value=16 Score=36.64 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCCceEe--cc-------------CChhhHHHHHhCCCCEEEEcCCCCC----C--------HHHHHHH
Q psy17999 50 EYVMLQQCADQVDIMFTA--SA-------------MDQVSFDFLLSANVPFIKIGSGDSN----N--------IPLIKYA 102 (335)
Q Consensus 50 ~~~~L~~~~~~~Gi~f~s--tp-------------fd~~svd~l~~l~v~~~KIaS~d~~----n--------~~LL~~~ 102 (335)
.++.|.++.+++|+.|-. .| +....++.+.+-|||++|+--+... . ..+-+++
T Consensus 95 Glk~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL 174 (479)
T 3lrk_A 95 GMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDAL 174 (479)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHH
Confidence 589999999999998854 23 3345567788899999999865431 1 1233667
Q ss_pred HhcCCcEEEeC
Q psy17999 103 ASKQKPLIIST 113 (335)
Q Consensus 103 a~~gkPvilSt 113 (335)
.++|+||++|.
T Consensus 175 ~~tGRpI~~Sl 185 (479)
T 3lrk_A 175 NKTGRPVFYSL 185 (479)
T ss_dssp HHHCSCCEEEE
T ss_pred HHhCCCeEEEe
Confidence 78999999995
No 497
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=60.24 E-value=1.1e+02 Score=28.41 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=96.0
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhH---HHHHhCCCCEEEEcCCC---CCCHHHHH---HHHh-cCC
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSF---DFLLSANVPFIKIGSGD---SNNIPLIK---YAAS-KQK 107 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~sv---d~l~~l~v~~~KIaS~d---~~n~~LL~---~~a~-~gk 107 (335)
..|+.++..++.+.+.+. .+++++-+-. .+++ ..++++|+|.+-+-..- .+.-.+++ ++|+ +++
T Consensus 71 ~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 71 ATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 458999999998877653 3677765543 3333 45567899998776542 23334444 4554 699
Q ss_pred cEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHHH
Q psy17999 108 PLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIHT 182 (335)
Q Consensus 108 PvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~~ 182 (335)
||+|= ||..++.+.+.+.++ .+ +++-+--+ .-|+..+..
T Consensus 151 PiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nIvgiKds--------sgd~~~~~~ 194 (314)
T 3qze_A 151 PQILYNVPGRTSCDMLPETVERLSK-----VP-----------------------NIIGIKEA--------TGDLQRAKE 194 (314)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHT-----ST-----------------------TEEEEEEC--------SCCHHHHHH
T ss_pred CEEEEeCccccCCCCCHHHHHHHhc-----CC-----------------------CEEEEEcC--------CCCHHHHHH
Confidence 99995 788888888876542 22 33333222 247778888
Q ss_pred HHHHCC-CCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 183 LRSRYP-DIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 183 L~~~fp-~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
+.+..| +..| ||+.. .....+.++||+ +|= -.+.+-|+.+.+|.+..+
T Consensus 195 ~~~~~~~~f~v-~~G~d---~~~l~~l~~Ga~G~is-------------~~an~~P~~~~~l~~a~~ 244 (314)
T 3qze_A 195 VIERVGKDFLV-YSGDD---ATAVELMLLGGKGNIS-------------VTANVAPRAMSDLCAAAM 244 (314)
T ss_dssp HHHHSCTTSEE-EESCG---GGHHHHHHTTCCEEEE-------------SGGGTCHHHHHHHHHHHH
T ss_pred HHHHcCCCeEE-EecCh---HHHHHHHHCCCCEEEe-------------cHHhhhHHHHHHHHHHHH
Confidence 877774 3444 66653 234567889998 542 234467888888877654
No 498
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=60.20 E-value=4.8 Score=38.14 Aligned_cols=53 Identities=19% Similarity=0.323 Sum_probs=40.4
Q ss_pred CCCCCeecCCCCCC--hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy17999 187 YPDIPIGYSGHENG--VHVCYAAVAMGAQIIEKHFTLDKSWKGSDHASSLTPPELKALVTGIRDI 249 (335)
Q Consensus 187 fp~~pVG~SdHt~g--~~~~~aAvalGA~vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir~~ 249 (335)
.|++|| |.. ...+++|...||.|+=-|.--. .|...|++|+-|+++++.||+.
T Consensus 24 ~P~lPv-----TpeEia~~A~~~~~AGAaivHlHvRdp-----~dG~ps~d~~~~~e~~~~IR~~ 78 (311)
T 3e49_A 24 SPYLPV-----TPDEVAQASIGAAEAGAAVIHLHARDP-----RDGRPTQDPAAFAEFLPRIKSN 78 (311)
T ss_dssp CTTSCC-----SHHHHHHHHHHHHHHTCSEEEECEECT-----TTCCEECCHHHHTTHHHHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHHHcCCcEEEEeecCC-----CCCCcCCCHHHHHHHHHHHHHh
Confidence 355666 333 4557889999999999997641 1566799999999999999983
No 499
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=60.00 E-value=1.1e+02 Score=28.55 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCC-ceEeccCChhhHHHHHhCCCCEEEEcCCCCCCHHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHHHH
Q psy17999 52 VMLQQCADQVDI-MFTASAMDQVSFDFLLSANVPFIKIGSGDSNNIPLIKYAASKQKPLIISTGMLPSIEHVDNIYTTVK 130 (335)
Q Consensus 52 ~~L~~~~~~~Gi-~f~stpfd~~svd~l~~l~v~~~KIaS~d~~n~~LL~~~a~~gkPvilStG~~~tl~Ei~~Av~~i~ 130 (335)
..|++.-++.+. .++.++||.-++..+++.|++++.+.|..+ ..+..|.| ++|.- |++|+...++.+.
T Consensus 7 ~~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~-------a~~~~G~p---D~~~v-t~~em~~~~~~I~ 75 (302)
T 3fa4_A 7 TSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGT-------AASVHGQA---DLGIC-TLNDMRANAEMIS 75 (302)
T ss_dssp HHHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHH-------HHHHHSCC---SSSCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHH-------HHHHcCCC---CCCcC-CHHHHHHHHHHHH
Confidence 345566666664 568899999999999999999999965321 12335888 78888 9999998887776
Q ss_pred h
Q psy17999 131 Q 131 (335)
Q Consensus 131 ~ 131 (335)
+
T Consensus 76 ~ 76 (302)
T 3fa4_A 76 N 76 (302)
T ss_dssp T
T ss_pred h
Confidence 4
No 500
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=59.96 E-value=1.1e+02 Score=28.24 Aligned_cols=151 Identities=13% Similarity=0.146 Sum_probs=91.6
Q ss_pred hcCCHHHHHHHHHHHHHc---CCceEeccCC---hhhHH---HHHhCCCCEEEEcCCCC---CCHHHHH---HHHh-cC-
Q psy17999 44 LEFSQEEYVMLQQCADQV---DIMFTASAMD---QVSFD---FLLSANVPFIKIGSGDS---NNIPLIK---YAAS-KQ- 106 (335)
Q Consensus 44 ~el~~e~~~~L~~~~~~~---Gi~f~stpfd---~~svd---~l~~l~v~~~KIaS~d~---~n~~LL~---~~a~-~g- 106 (335)
..|+.++..++.+.+.+. .+++++-+-+ .++++ .++++|+|.+-+...-. +.-.+++ ++|+ ++
T Consensus 59 ~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~ 138 (303)
T 2wkj_A 59 FVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADG 138 (303)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 458999999998887753 4777755543 44444 44578999887755432 4444554 4554 56
Q ss_pred CcEEEe-----CCCCCCHHHHHHHHHHHHhcCCCCceeecccCCCCCCCCcccccCceEEeeecCCCCCCccCCCchHHH
Q psy17999 107 KPLIIS-----TGMLPSIEHVDNIYTTVKQYHSNLSILHCVSAYPTPYPTVKQYHSNLSILHCVSAYPTPYHDINLNVIH 181 (335)
Q Consensus 107 kPvilS-----tG~~~tl~Ei~~Av~~i~~g~~~~~~~~c~~g~~~~~~~~~~~~~~l~llHC~s~YP~~~~~~nL~~i~ 181 (335)
+||||= ||..++.+.+.+.++ .+ +++-+- ...-|+..+.
T Consensus 139 lPiilYn~P~~tg~~l~~~~~~~La~-----~p-----------------------nIvgiK--------~s~gd~~~~~ 182 (303)
T 2wkj_A 139 LPMVVYNIPALSGVKLTLDQINTLVT-----LP-----------------------GVGALX--------QTSGDLYQME 182 (303)
T ss_dssp CCEEEEECHHHHCCCCCHHHHHHHHT-----ST-----------------------TEEEEE--------ECCCCHHHHH
T ss_pred CCEEEEeCccccCCCCCHHHHHHHhc-----CC-----------------------CEEEEe--------CCCCCHHHHH
Confidence 999993 787778888876543 12 232222 1224677777
Q ss_pred HHHHHCCCCCeecCCCCCChHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy17999 182 TLRSRYPDIPIGYSGHENGVHVCYAAVAMGAQ-IIEKHFTLDKSWKGSDHASSLTPPELKALVTGIR 247 (335)
Q Consensus 182 ~L~~~fp~~pVG~SdHt~g~~~~~aAvalGA~-vIEkH~tld~~~~G~Dh~~Sl~p~el~~lv~~ir 247 (335)
.+++..|++.| ||+.. .....+.++||+ +|= -.+.+-|+.+.+|.+.++
T Consensus 183 ~~~~~~~~f~v-~~G~d---~~~~~~l~~G~~G~is-------------~~an~~P~~~~~l~~a~~ 232 (303)
T 2wkj_A 183 QIRREHPDLVL-YNGYD---NIFASGLLAGADGGIG-------------STYNIMGWRYQGIVKALK 232 (303)
T ss_dssp HHHHHCTTCEE-EECCG---GGHHHHHHHTCCEEEE-------------TTHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCeEE-EeCcH---HHHHHHHHCCCCEEEe-------------CHHHhCHHHHHHHHHHHH
Confidence 77766544444 55543 234556778987 443 112245777777776554
Done!