BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18009
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08D64|ABCB6_XENTR ATP-binding cassette sub-family B member 6, mitochondrial
OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1
Length = 849
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 77/80 (96%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGGEKQRVAIART+LKAPQI+LLDEATSALDT+TERNIQ++L +VCA+RTTI+VAHRLS
Sbjct: 718 LSGGEKQRVAIARTILKAPQIILLDEATSALDTETERNIQASLAKVCANRTTIVVAHRLS 777
Query: 122 TIIHADEILVMHAGEIVERG 141
T+I++D+ILV+ G+IVERG
Sbjct: 778 TVINSDQILVLKEGQIVERG 797
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
S+ VG SG+GKSTIIRLLFRFYDV+ G I +D Q+I TV Q SLR IGVVPQDTVLFN
Sbjct: 609 SIALVGPSGSGKSTIIRLLFRFYDVKGGTIKVDGQDISTVRQESLRSHIGVVPQDTVLFN 668
Query: 206 NSIK 209
++I+
Sbjct: 669 DTIR 672
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAI 262
F + IQ +F+DMENMF+L E +V D AP L G +EF NV FSY + I
Sbjct: 537 WFGTYYRMIQSSFIDMENMFELFNEDQEVKDAVNAPALMFRSGKIEFENVHFSYLDGKEI 596
Query: 263 LKNISFTVPAGKTLA 277
L++ISFTV G+++A
Sbjct: 597 LRDISFTVMPGQSIA 611
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 1 MENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 60
MENMF+L E +V D AP L G +EF NV FSY + IL++ISFTV G+++A
Sbjct: 552 MENMFELFNEDQEVKDAVNAPALMFRSGKIEFENVHFSYLDGKEILRDISFTVMPGQSIA 611
Query: 61 LLSGGEKQRVAIARTLLK 78
L+ + I R L +
Sbjct: 612 LVGPSGSGKSTIIRLLFR 629
>sp|Q9NP58|ABCB6_HUMAN ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo
sapiens GN=ABCB6 PE=1 SV=1
Length = 842
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 72/80 (90%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGGEKQRVAIART+LKAP I+LLDEATSALDT ER IQ++L +VCA+RTTI+VAHRLS
Sbjct: 727 LSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLS 786
Query: 122 TIIHADEILVMHAGEIVERG 141
T+++AD+ILV+ G IVERG
Sbjct: 787 TVVNADQILVIKDGCIVERG 806
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
+L VG SGAGKSTI+RLLFRFYD+ SG I ID Q+I V+QASLR IGVVPQDTVLFN
Sbjct: 618 TLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFN 677
Query: 206 NSI 208
++I
Sbjct: 678 DTI 680
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAI 262
F + IQ NF+DMENMFDLL+E +V D+P A L +G +EF NV FSY R
Sbjct: 546 WFGTYYRMIQTNFIDMENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRET 605
Query: 263 LKNISFTVPAGKTLA 277
L+++SFTV G+TLA
Sbjct: 606 LQDVSFTVMPGQTLA 620
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 1 MENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 60
MENMFDLL+E +V D+P A L +G +EF NV FSY R L+++SFTV G+TLA
Sbjct: 561 MENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLA 620
Query: 61 LLSGGEKQRVAIARTLLK 78
L+ + I R L +
Sbjct: 621 LVGPSGAGKSTILRLLFR 638
>sp|O70595|ABCB6_RAT ATP-binding cassette sub-family B member 6, mitochondrial OS=Rattus
norvegicus GN=Abcb6 PE=2 SV=1
Length = 836
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 78/102 (76%), Gaps = 9/102 (8%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGGEKQRVAIART+LKAP I+LLDEATSALDT ER IQ++L +VC +RTTI+VAHRLS
Sbjct: 727 LSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNRTTIVVAHRLS 786
Query: 122 TIIHADEILVMHAGEIVE---------RGSLFVSLLQVGQSG 154
T+++AD+ILV+ G I+E RG ++ + Q+ Q G
Sbjct: 787 TVVNADQILVIKDGCIIERGRHEALLSRGGVYAEMWQLQQQG 828
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SGAGKSTI+RLLFRFYD+ SG I ID Q+I V+Q SLR IGVVPQDTVLFN++I
Sbjct: 622 VGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTI 680
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAI 262
F + IQ NF+DMENMFDLL+E +V D+P A L +G VEF NV FSY R
Sbjct: 546 WFGTYYRMIQTNFIDMENMFDLLKEETEVKDVPGAGPLRFHKGRVEFENVHFSYADGRET 605
Query: 263 LKNISFTVPAGKTLA 277
L+++SFTV G+T+A
Sbjct: 606 LQDVSFTVMPGQTVA 620
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 1 MENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 60
MENMFDLL+E +V D+P A L +G VEF NV FSY R L+++SFTV G+T+A
Sbjct: 561 MENMFDLLKEETEVKDVPGAGPLRFHKGRVEFENVHFSYADGRETLQDVSFTVMPGQTVA 620
Query: 61 LLSGGEKQRVAIARTLLK 78
L+ + I R L +
Sbjct: 621 LVGPSGAGKSTILRLLFR 638
>sp|Q9DC29|ABCB6_MOUSE ATP-binding cassette sub-family B member 6, mitochondrial OS=Mus
musculus GN=Abcb6 PE=1 SV=1
Length = 842
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 9/102 (8%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGGEKQRVAIART+LKAP I+LLDEATSALDT ER IQ++L +VC +RTTI++AHRLS
Sbjct: 727 LSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNRTTIVIAHRLS 786
Query: 122 TIIHADEILVMHAGEIVE---------RGSLFVSLLQVGQSG 154
T+++AD+ILV+ G I+E RG ++ + Q+ Q G
Sbjct: 787 TVVNADQILVIKDGCIIERGRHEALLSRGGVYAEMWQLQQQG 828
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SGAGKSTI+RLLFRFYD+ SG I ID Q+I V+Q SLR IGVVPQDTVLFN++I
Sbjct: 622 VGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTI 680
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAI 262
F + IQ NF+DMENMFDLL+E +V D+P A L +G +EF NV FSY +
Sbjct: 546 WFGTYYRMIQTNFIDMENMFDLLKEETEVKDVPGAGPLRFHKGRIEFENVHFSYADGQET 605
Query: 263 LKNISFTVPAGKTLA 277
L+++SFTV G+T+A
Sbjct: 606 LQDVSFTVMPGQTVA 620
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 1 MENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 60
MENMFDLL+E +V D+P A L +G +EF NV FSY + L+++SFTV G+T+A
Sbjct: 561 MENMFDLLKEETEVKDVPGAGPLRFHKGRIEFENVHFSYADGQETLQDVSFTVMPGQTVA 620
Query: 61 LLSGGEKQRVAIARTLLK 78
L+ + I R L +
Sbjct: 621 LVGPSGAGKSTILRLLFR 638
>sp|Q54RU1|ABCB6_DICDI ABC transporter B family member 6 OS=Dictyostelium discoideum
GN=abcB6 PE=3 SV=1
Length = 678
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
F G+ LSGGEKQRV+IAR LLK P I++LDEA+S+LDT TER IQ A+N V
Sbjct: 552 FRTVVGERGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKG 611
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTIIH DEILV+ G IVERGS
Sbjct: 612 RTTLVIAHRLSTIIHCDEILVLKGGHIVERGS 643
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
S+ VG +G GKSTI RLL RFYDV+ G+I I+ +NIK V+Q SLR IGVVPQ+TVLFN
Sbjct: 454 SIALVGSTGGGKSTIFRLLCRFYDVDQGEILINGENIKDVTQTSLRSIIGVVPQETVLFN 513
Query: 206 NSI 208
+++
Sbjct: 514 DTV 516
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 19/90 (21%)
Query: 206 NSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQG---------AVEFRNVSFSY 256
+S + I F DMEN+F+LL +V D P A L ++EFRN+SF+Y
Sbjct: 368 SSYRMILTAFTDMENLFELLDTQPEVSDSPNAKELNFNDTNNPSKTILPSIEFRNISFTY 427
Query: 257 TPER---------AILKNISFTVPAGKTLA 277
P + IL NISFTVPAGK++A
Sbjct: 428 -PNKNKEQQQSSPKILDNISFTVPAGKSIA 456
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 21/90 (23%)
Query: 1 MENMFDLLQETCDVIDIPQAPMLCVAQG---------AVEFRNVSFSYTPER-------- 43
MEN+F+LL +V D P A L ++EFRN+SF+Y P +
Sbjct: 380 MENLFELLDTQPEVSDSPNAKELNFNDTNNPSKTILPSIEFRNISFTY-PNKNKEQQQSS 438
Query: 44 -AILKNISFTVPAGKTLALL--SGGEKQRV 70
IL NISFTVPAGK++AL+ +GG K +
Sbjct: 439 PKILDNISFTVPAGKSIALVGSTGGGKSTI 468
>sp|Q48P40|MSBA_PSE14 Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=msbA PE=3 SV=2
Length = 600
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 73/93 (78%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL+ V
Sbjct: 480 GFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMK 539
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTI AD ILVM AG+IVERG+
Sbjct: 540 GRTTLVIAHRLSTIEKADMILVMDAGQIVERGT 572
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY E G+I +D I +LR+ I V Q+ LFN++I
Sbjct: 386 VGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDTI 444
>sp|Q9FWX8|AB12B_ARATH ABC transporter B family member 12 OS=Arabidopsis thaliana
GN=ABCB12 PE=2 SV=2
Length = 1273
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 72/81 (88%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P+++LLDEATSALDT++ER +Q AL+RV +RTT++VAHRLS
Sbjct: 507 LSGGQKQRIAIARAILKDPRVLLLDEATSALDTESERVVQEALDRVMVNRTTVVVAHRLS 566
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H+G++VE+GS
Sbjct: 567 TVRNADMIAVIHSGKMVEKGS 587
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+I+LLDEATSALD ++ER +Q AL+RV +RTT++VAHRLS
Sbjct: 1169 LSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERLVQDALDRVIVNRTTVVVAHRLS 1228
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD I ++ G I E G+
Sbjct: 1229 TIKNADVIAIVKNGVIAENGT 1249
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG I +D +K + LRQ +G+V Q+ VLFN++I+
Sbjct: 1061 VGESGSGKSTVISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIR 1120
Query: 210 A 210
A
Sbjct: 1121 A 1121
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 136 EIVERGSLFV----SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLR 191
EI + SLF+ + VG+SG+GKST+I L+ RFYD ++G++ ID N+K +R
Sbjct: 384 EIFDGFSLFIPSGATAALVGESGSGKSTVINLIERFYDPKAGEVLIDGINLKEFQLKWIR 443
Query: 192 QAIGVVPQDTVLFNNSI 208
IG+V Q+ VLF++SI
Sbjct: 444 SKIGLVCQEPVLFSSSI 460
>sp|Q87VF3|MSBA_PSESM Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=msbA PE=3 SV=2
Length = 600
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 73/93 (78%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL+ V
Sbjct: 480 GFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMK 539
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTI AD ILVM AG+IVERG+
Sbjct: 540 GRTTLVIAHRLSTIEKADMILVMDAGKIVERGT 572
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY E G+I +D I +LR+ I V Q+ LFN+SI
Sbjct: 386 VGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDSI 444
>sp|Q02592|HMT1_SCHPO Heavy metal tolerance protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hmt1 PE=2 SV=3
Length = 830
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 66/81 (81%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGGEKQRVA+AR +LK P I+LLDEATSALDT TER IQ+ALNR+ + RT I++AHRLS
Sbjct: 721 LSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLASGRTAIVIAHRLS 780
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD IL + G IVE G+
Sbjct: 781 TITNADLILCISNGRIVETGT 801
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG GKSTI+R+L RF+DV SG I ID+Q+I+ V+ +SLR +IGVVPQD+ LFN++I
Sbjct: 616 VGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRSSIGVVPQDSTLFNDTI 674
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAI 262
F +++Q + +D E + ++ +E V++ P AP L V QG V F +VSF+Y P + +
Sbjct: 540 FFGTLYRSLQNSIIDTERLLEIFEEKPTVVEKPNAPDLKVTQGKVIFSHVSFAYDPRKPV 599
Query: 263 LKNISFTVPAGKTLA 277
L +I+F GK +A
Sbjct: 600 LSDINFVAQPGKVIA 614
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLAL 61
E + ++ +E V++ P AP L V QG V F +VSF+Y P + +L +I+F GK +AL
Sbjct: 556 ERLLEIFEEKPTVVEKPNAPDLKVTQGKVIFSHVSFAYDPRKPVLSDINFVAQPGKVIAL 615
Query: 62 L--SGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHR 119
+ SGG K I R LL+ + + + +D + RN+ + + R++I V +
Sbjct: 616 VGESGGGKS--TIMRILLRFFDV---NSGSITIDDQDIRNVT-----LSSLRSSIGVVPQ 665
Query: 120 LSTIIHADEIL 130
ST+ + D IL
Sbjct: 666 DSTLFN-DTIL 675
>sp|Q4ZZ16|MSBA_PSEU2 Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1
Length = 600
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 73/93 (78%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL+ V
Sbjct: 480 GFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMK 539
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTI AD ILVM AG+IVERG+
Sbjct: 540 GRTTLVIAHRLSTIEKADLILVMDAGQIVERGT 572
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY + G+I +D I +LR+ I V Q+ LFN++I
Sbjct: 386 VGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTI 444
>sp|Q9SYI2|AB3B_ARATH ABC transporter B family member 3 OS=Arabidopsis thaliana GN=ABCB3
PE=1 SV=1
Length = 1229
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 69/81 (85%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P+I+LLDEATSALD ++ER +Q AL+RV SRTT+IVAHRLS
Sbjct: 487 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMMSRTTVIVAHRLS 546
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H G+IVE GS
Sbjct: 547 TVRNADMIAVIHRGKIVEEGS 567
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 68/81 (83%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+I+LLDEATSALD ++ER +Q AL+RV +RTT++VAHRLS
Sbjct: 1125 LSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLS 1184
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD I V+ G IVE+G+
Sbjct: 1185 TIKNADVIAVVKNGVIVEKGT 1205
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG I +D +K + +RQ +G+V Q+ VLFN++I+
Sbjct: 1018 VGESGSGKSTVISLLQRFYDPDSGHITLDRVELKKLQLKWVRQQMGLVGQEPVLFNDTIR 1077
Query: 210 A 210
+
Sbjct: 1078 S 1078
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKS++I L+ RFYD SG + ID N+K +R IG+V Q+ VLF++SI
Sbjct: 382 VGESGSGKSSVISLIERFYDPSSGSVLIDGVNLKEFQLKWIRGKIGLVSQEPVLFSSSI 440
>sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2
PE=1 SV=3
Length = 1273
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 74/93 (79%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
++ G+ +SGG++QR+AIAR +LK P I+LLDEATSALD ++ER +Q AL+R+ A
Sbjct: 1157 GYSTKVGERGVQMSGGQRQRIAIARAILKNPAILLLDEATSALDVESERVVQQALDRLMA 1216
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
+RTT++VAHRLSTI +AD I V+H G+IVE+GS
Sbjct: 1217 NRTTVVVAHRLSTIKNADTISVLHGGKIVEQGS 1249
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LSGG+KQR+AI+R ++K P I+LLDEATSALD ++E+++Q AL+RV
Sbjct: 528 GFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMV 587
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT++VAHRLST+ +AD I V+H G+IVE G+
Sbjct: 588 GRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGN 620
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 68 QRVAIARTLLKAPQIV-----LLDEATSALDTKTER--NIQSA--LNRVCASRTTIIVAH 118
+ +A+A LLK Q+V +LD T + +E N++ L V S +
Sbjct: 987 ETLALAPDLLKGNQMVASVFEILDRKTQIVGETSEELNNVEGTIELKGVHFSYPS----- 1041
Query: 119 RLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFID 178
R +I D L++ AG+ S+ VGQSG+GKS++I L+ RFYD +G + I+
Sbjct: 1042 RPDVVIFRDFDLIVRAGK---------SMALVGQSGSGKSSVISLILRFYDPTAGKVMIE 1092
Query: 179 NQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
++IK + +LR+ IG+V Q+ LF +I
Sbjct: 1093 GKDIKKLDLKALRKHIGLVQQEPALFATTI 1122
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYD 169
SR +++ RL+ I A +I+ + VG SG+GKST+I L+ RFY+
Sbjct: 412 SRPDVVIFDRLNLAIPAGKIVAL-----------------VGGSGSGKSTVISLIERFYE 454
Query: 170 VESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
SG + +D NI + LR IG+V Q+ LF +I+
Sbjct: 455 PISGAVLLDGNNISELDIKWLRGQIGLVNQEPALFATTIR 494
>sp|Q9HUG8|MSBA_PSEAE Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=msbA PE=3 SV=1
Length = 603
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 75/103 (72%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL+ V
Sbjct: 483 GFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESERHIQAALDEVMK 542
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQ 152
RTT+++AHRLSTI AD ILVM G+IVERGS L Q G
Sbjct: 543 GRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELLAQNGH 585
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY G I +D ++ +LR+ I +V Q LFN+S+
Sbjct: 389 VGRSGSGKSTLANLVPRFYQHNDGKILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSV 447
>sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana
GN=ABCB11 PE=2 SV=1
Length = 1278
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 70/81 (86%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P+I+LLDEATSALD ++ER +Q AL+RV +RTT+IVAHRLS
Sbjct: 520 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLS 579
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H G++VE+GS
Sbjct: 580 TVRNADMIAVIHRGKMVEKGS 600
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+I+LLDEATSALD ++ER +Q AL+RV +RTTI+VAHRLS
Sbjct: 1174 LSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLS 1233
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD I V+ G I E+G+
Sbjct: 1234 TIKNADVIAVVKNGVIAEKGT 1254
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG I +D +K + LRQ +G+V Q+ VLFN++I+
Sbjct: 1066 VGESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIR 1125
Query: 210 A 210
A
Sbjct: 1126 A 1126
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 136 EIVERGSLFV----SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLR 191
EI + SLF+ + VG+SG+GKST+I L+ RFYD +SG + ID N+K +R
Sbjct: 397 EIFDGFSLFIPSGATAALVGESGSGKSTVISLIERFYDPKSGAVLIDGVNLKEFQLKWIR 456
Query: 192 QAIGVVPQDTVLFNNSI 208
IG+V Q+ VLF++SI
Sbjct: 457 SKIGLVSQEPVLFSSSI 473
>sp|O80725|AB4B_ARATH ABC transporter B family member 4 OS=Arabidopsis thaliana GN=ABCB4
PE=1 SV=1
Length = 1286
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 70/81 (86%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+A+AR +LK P+I+LLDEATSALD ++ER +Q AL+R+ +RTT++VAHRLS
Sbjct: 523 LSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLS 582
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H G+IVE+GS
Sbjct: 583 TVRNADMIAVIHQGKIVEKGS 603
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 67/80 (83%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+++LLDEATSALD ++ER +Q AL+RV +RTTI+VAHRLS
Sbjct: 1182 LSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLS 1241
Query: 122 TIIHADEILVMHAGEIVERG 141
TI +AD I V+ G IVE+G
Sbjct: 1242 TIKNADVIAVVKNGVIVEKG 1261
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 136 EIVERG-SLFVS----LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASL 190
E + RG SLF+S + VGQSG+GKST++ L+ RFYD ++GD+ ID N+K +
Sbjct: 399 EQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLKEFQLKWI 458
Query: 191 RQAIGVVPQDTVLFNNSIK 209
R IG+V Q+ VLF SIK
Sbjct: 459 RSKIGLVSQEPVLFTASIK 477
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG+I +D IK++ LRQ G+V Q+ +LFN +I+
Sbjct: 1076 VGESGSGKSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILFNETIR 1135
Query: 210 A 210
A
Sbjct: 1136 A 1136
>sp|Q9M1Q9|AB21B_ARATH ABC transporter B family member 21 OS=Arabidopsis thaliana
GN=ABCB21 PE=1 SV=2
Length = 1296
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 70/81 (86%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+A+AR +LK P+I+LLDEATSALD ++ER +Q AL+R+ +RTT++VAHRLS
Sbjct: 542 LSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLS 601
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H G+IVE+GS
Sbjct: 602 TVRNADMIAVIHQGKIVEKGS 622
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 67/80 (83%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+++LLDEATSALD ++ER +Q AL+RV +RTT++VAHRLS
Sbjct: 1192 LSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLS 1251
Query: 122 TIIHADEILVMHAGEIVERG 141
TI +AD I V+ G IVE+G
Sbjct: 1252 TIKNADVIAVVKNGVIVEKG 1271
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG I +D IKT+ LRQ G+V Q+ VLFN +I+
Sbjct: 1086 VGESGSGKSTVIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLFNETIR 1145
Query: 210 A 210
A
Sbjct: 1146 A 1146
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VGQSG+GKST++ L+ RFYD +SG++ ID N+K +R IG+V Q+ VLF +SIK
Sbjct: 437 VGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTSSIK 496
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 27 QGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL--SGGEKQRV 70
+G +E NV+FSY PE I + S ++ +G T+AL+ SG K V
Sbjct: 400 RGDIELNNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTV 447
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 27 QGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL--SGGEKQRV 70
+G +E R++SF Y P+ I +++ ++ AGKT+AL+ SG K V
Sbjct: 1049 KGDIELRHISFKYPSRPDVQIFQDLCLSIRAGKTIALVGESGSGKSTV 1096
>sp|Q9C7F2|AB14B_ARATH ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14
PE=3 SV=1
Length = 1247
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR +LK P ++LLDEATSALDT E+ +Q AL+++ RTTI+VAHRLS
Sbjct: 1145 LSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMKGRTTILVAHRLS 1204
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI AD I+V+H G++VE+GS
Sbjct: 1205 TIRKADTIVVLHKGKVVEKGS 1225
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 69/92 (75%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
+ G+ LSGG+KQR+AIAR +L+ P+I+LLDEATSALD ++E+ +Q AL+ V
Sbjct: 500 YNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEK 559
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTTI++AHRLSTI + D+I+V+ G++ E GS
Sbjct: 560 RTTIVIAHRLSTIRNVDKIVVLRDGQVRETGS 591
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
SL VG SG+GKST+I L+ RFYD +G++ ID +IK+V+ SLR+ + +V Q+ LF+
Sbjct: 1036 SLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGHDIKSVNLRSLRKKLALVQQEPALFS 1095
Query: 206 NSI 208
SI
Sbjct: 1096 TSI 1098
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKSTII ++ RFY+ SG+I +D +IK + LR+ +G+V Q+ LF +I
Sbjct: 406 VGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQEPALFATTI 464
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 1 MENMFDLLQETCDVI-DIPQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGK 57
+ ++F +L ++ D P + ++ +G +EFRNVSF+Y PE AI KN++ V AGK
Sbjct: 976 LGSVFRVLHRETEIPPDQPNSRLVTHIKGDIEFRNVSFAYPTRPEIAIFKNLNLRVSAGK 1035
Query: 58 TLALL--SGGEKQRV 70
+LA++ SG K V
Sbjct: 1036 SLAVVGPSGSGKSTV 1050
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 218 MENMFDLLQETCDVI-DIPQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGK 274
+ ++F +L ++ D P + ++ +G +EFRNVSF+Y PE AI KN++ V AGK
Sbjct: 976 LGSVFRVLHRETEIPPDQPNSRLVTHIKGDIEFRNVSFAYPTRPEIAIFKNLNLRVSAGK 1035
Query: 275 TLA 277
+LA
Sbjct: 1036 SLA 1038
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 207 SIKAIQKNFVDMENMFDLLQ----ETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERA- 261
S+ AI K V N+F ++ E+ + ++ L G +EF VSF+Y P R
Sbjct: 331 SLSAISKGRVAAANIFKMIGNNNLESSERLE--NGTTLQNVVGKIEFCGVSFAY-PSRPN 387
Query: 262 -ILKNISFTVPAGKTLA 277
+ +N+SFT+ +GKT A
Sbjct: 388 MVFENLSFTIHSGKTFA 404
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 28 GAVEFRNVSFSYTPERA--ILKNISFTVPAGKTLALL--SGGEKQRV 70
G +EF VSF+Y P R + +N+SFT+ +GKT A + SG K +
Sbjct: 371 GKIEFCGVSFAY-PSRPNMVFENLSFTIHSGKTFAFVGPSGSGKSTI 416
>sp|Q4KJB2|MSBA_PSEF5 Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=msbA PE=3
SV=1
Length = 601
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL++V RTT++
Sbjct: 487 GENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLV 546
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGS 142
+AHRLSTI AD ILVM G IVERGS
Sbjct: 547 IAHRLSTIEKADLILVMDQGRIVERGS 573
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY + G I +D ++ +LR+ I V Q LF++++
Sbjct: 387 VGRSGSGKSTLANLIPRFYHHDKGQILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTV 445
>sp|Q88D92|MSBA_PSEPK Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
putida (strain KT2440) GN=msbA PE=3 SV=1
Length = 602
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL+ V
Sbjct: 482 GFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQ 541
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTI AD+ILVM G +VERG+
Sbjct: 542 GRTTLVIAHRLSTIEKADQILVMDQGRLVERGT 574
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY + G I +D I+ +LR+ + V Q LFN+++
Sbjct: 388 VGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTV 446
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 137 IVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGV 196
+ + GSL+ +LQ+ A + + +LF D +GD+ + A G+
Sbjct: 259 MTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDL------------VAYITAAGL 306
Query: 197 VPQDTVLFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY 256
+P+ + IQK E++F+ L E +V D V +G +E RN+SF+Y
Sbjct: 307 LPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEV-DTGTVEKERV-EGRLEVRNLSFTY 364
Query: 257 -TPERAILKNISFTVPAGKTLA 277
ER +L +ISF G+ +A
Sbjct: 365 PGTEREVLSDISFVAEPGQMIA 386
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 27 QGAVEFRNVSFSY-TPERAILKNISFTVPAGKTLALL--SGGEKQRVA 71
+G +E RN+SF+Y ER +L +ISF G+ +AL+ SG K +A
Sbjct: 352 EGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLA 399
>sp|Q9SYI3|AB5B_ARATH ABC transporter B family member 5 OS=Arabidopsis thaliana GN=ABCB5
PE=3 SV=1
Length = 1230
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 69/81 (85%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P+I+LLDEATSALD ++ER +Q AL+R+ +RTT+IVAHRLS
Sbjct: 492 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLS 551
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I V+H G+IVE GS
Sbjct: 552 TVRNADIIAVIHRGKIVEEGS 572
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQRVAIAR ++K P+I+LLDEATSALD ++ER +Q AL+RV +RTTI+VAHRLS
Sbjct: 1126 LSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLS 1185
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD I V+ G I E+G+
Sbjct: 1186 TIKNADVIAVVKNGVIAEKGT 1206
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+I LL RFYD +SG I +D +K + LRQ +G+V Q+ VLFN++I+
Sbjct: 1019 VGESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLRLKWLRQQMGLVGQEPVLFNDTIR 1078
Query: 210 A 210
A
Sbjct: 1079 A 1079
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+I L+ RFYD SG + ID ++K +R IG+V Q+ VLF++SI
Sbjct: 387 VGESGSGKSTVISLIERFYDPNSGQVLIDGVDLKEFQLKWIRGKIGLVSQEPVLFSSSI 445
>sp|Q5P2S7|MSBA_AROAE Lipid A export ATP-binding/permease protein MsbA OS=Aromatoleum
aromaticum (strain EbN1) GN=msbA PE=3 SV=1
Length = 601
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 72/93 (77%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
F G+ LSGG++QR+AIAR LLK I++LDEATSALDT++ER+IQ+AL+RV
Sbjct: 480 GFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQ 539
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
+RTT+++AHRLSTI AD I+VM G IVERGS
Sbjct: 540 ARTTLVIAHRLSTIEQADVIMVMDHGRIVERGS 572
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY + G I ID +++ + +LR+ I +V Q LFN+++
Sbjct: 386 VGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTV 444
>sp|Q9C7F8|AB13B_ARATH ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13
PE=3 SV=1
Length = 1245
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
+ AG LSGG+KQRVAIAR +LK P ++LLDEATSALDT +E+ +Q AL+++
Sbjct: 1132 YKTHAGDKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKG 1191
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT++VAHRLSTI AD + V+H G +VE+GS
Sbjct: 1192 RTTVLVAHRLSTIRKADTVAVLHKGRVVEKGS 1223
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 69/92 (75%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
+ G+ LSGG+KQR+AIAR +L+ P+I+LLDEATSALD ++E+ +Q AL+ V
Sbjct: 499 YNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEK 558
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTTI+VAHRLSTI + D+I+V+ G++ E GS
Sbjct: 559 RTTIVVAHRLSTIRNVDKIVVLRDGQVRETGS 590
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
SL VG SG+GKST+I L+ RFYD +G++ ID Q+IKT++ SLR+ + +V Q+ LF+
Sbjct: 1034 SLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDIKTLNLRSLRKKLALVQQEPALFS 1093
Query: 206 NSI 208
+I
Sbjct: 1094 TTI 1096
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKSTII ++ RFY+ SG+I +D +IK++ R+ +G+V Q+ LF +I
Sbjct: 405 VGPSGSGKSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTI 463
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 7 LLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL-- 62
L +ET D P + M+ +G +EFRNVSF Y PE I KN++ V AGK+LA++
Sbjct: 981 LHRETKISPDQPNSRMVSQVKGDIEFRNVSFVYPTRPEIDIFKNLNLRVSAGKSLAVVGP 1040
Query: 63 SGGEKQRV 70
SG K V
Sbjct: 1041 SGSGKSTV 1048
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 224 LLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLA 277
L +ET D P + M+ +G +EFRNVSF Y PE I KN++ V AGK+LA
Sbjct: 981 LHRETKISPDQPNSRMVSQVKGDIEFRNVSFVYPTRPEIDIFKNLNLRVSAGKSLA 1036
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 207 SIKAIQKNFVDMENMFDLL----QETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPER-- 260
S+ AI K V N+F ++ E+ +D + L G +EF+ VSF+Y P R
Sbjct: 330 SLSAIAKGRVAAANIFRMIGNNNSESSQRLD--EGTTLQNVAGRIEFQKVSFAY-PSRPN 386
Query: 261 AILKNISFTVPAGKTLA 277
+ +N+SFT+ +GKT A
Sbjct: 387 MVFENLSFTIRSGKTFA 403
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 28 GAVEFRNVSFSYTPER--AILKNISFTVPAGKTLALL--SGGEKQRV 70
G +EF+ VSF+Y P R + +N+SFT+ +GKT A + SG K +
Sbjct: 370 GRIEFQKVSFAY-PSRPNMVFENLSFTIRSGKTFAFVGPSGSGKSTI 415
>sp|Q3KJ31|MSBA_PSEPF Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf0-1) GN=msbA PE=3 SV=1
Length = 600
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 71/87 (81%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ LLSGG++QR+AIAR LLK +++LDEATSALDT++ER+IQ+AL++V RTT++
Sbjct: 487 GENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLV 546
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGS 142
+AHRLSTI AD ILVM G IVERG+
Sbjct: 547 IAHRLSTIEKADLILVMDQGRIVERGT 573
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKST+ L+ RFY + G+I ID ++ +LR+ I V Q LF++++
Sbjct: 387 VGRSGSGKSTLANLIPRFYHHDKGEILIDGVEVEQYKLLNLRRHIAQVTQHVTLFSDTV 445
>sp|Q5QU36|MSBA_IDILO Lipid A export ATP-binding/permease protein MsbA OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=msbA PE=3 SV=1
Length = 582
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 71/87 (81%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ +LSGG++QR+AIAR LL+ I++LDEATSALDT++ER+IQ AL + +RT I+
Sbjct: 473 GENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIV 532
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGS 142
+AHRLSTI +ADEILVM GEI+ERG+
Sbjct: 533 IAHRLSTIENADEILVMDNGEIIERGT 559
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKSTI LL RFYDVE G I +D NI LR+ +V Q LFN++I
Sbjct: 373 VGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTI 431
>sp|Q1QX69|MSBA_CHRSD Lipid A export ATP-binding/permease protein MsbA
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1
Length = 579
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G +LSGG++QR+AIAR + K +++LDEATSALDT++ER IQ AL RVC RTT +
Sbjct: 470 GDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATSALDTESERYIQQALERVCRGRTTFV 529
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGA 155
+AHRLSTI AD ILVM GEI+E G+ L Q G A
Sbjct: 530 IAHRLSTIERADRILVMEQGEIIESGTHGELLAQDGAYAA 569
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST++ L+ RFY G + +D+ +I+ + + LRQ I +V Q LFN +I
Sbjct: 371 VGRSGSGKSTLVSLMPRFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIA 430
Query: 210 A 210
A
Sbjct: 431 A 431
>sp|P36619|PMD1_SCHPO Leptomycin B resistance protein pmd1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmd1 PE=3 SV=2
Length = 1362
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 74/92 (80%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
F+ G+ L+SGG+KQR+AIAR ++ P+I+LLDEATSALD+K+E +Q AL+ S
Sbjct: 557 FSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDNASRS 616
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTTI++AHRLSTI +AD I+V++AG+IVE+GS
Sbjct: 617 RTTIVIAHRLSTIRNADNIVVVNAGKIVEQGS 648
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ + LSGG+KQR+AIAR L++ P+I+LLDEATSALD+ +E+ +Q ALN RTT+
Sbjct: 1253 GQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALNAASQGRTTVA 1312
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGS 142
+AHRLS+I AD I V G I E G+
Sbjct: 1313 IAHRLSSIQDADCIFVFDGGVIAEAGT 1339
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKSTII L+ RFYD G +F+D ++++T++ ASLR I +V Q+ VLF ++
Sbjct: 454 VGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLRTLNVASLRNQISLVQQEPVLFATTV 512
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG GKST I L+ RFYD ++G + +D N++ + R+ I +V Q+ L+ +++
Sbjct: 1153 VGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRDYNINDYRKQIALVSQEPTLYQGTVR 1212
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 18 PQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL--SGGEKQRV 70
P ++ +G +E +N+ F Y PE +L N S P+GK AL+ SG K +
Sbjct: 408 PTGDVVKDIKGEIELKNIRFVYPTRPEVLVLDNFSLVCPSGKITALVGASGSGKSTI 464
>sp|Q9LSJ6|AB17B_ARATH ABC transporter B family member 17 OS=Arabidopsis thaliana GN=ABCB17
PE=3 SV=1
Length = 1240
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P ++LLDEATSALD+K+ER +Q AL RV RT+I++AHRLS
Sbjct: 1136 LSGGQKQRIAIARAVLKNPSVLLLDEATSALDSKSERVVQDALERVMVGRTSIMIAHRLS 1195
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVGQSG 154
TI + D I+V+ G+IVE G+ SLL+ G +G
Sbjct: 1196 TIQNCDMIVVLGKGKIVESGT-HSSLLEKGPTG 1227
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 72/94 (76%)
Query: 49 ISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC 108
+ + G+ +SGG+KQR+AIAR ++K+P+I+LLDEATSALD+++ER +Q +L+
Sbjct: 485 LGYKTQVGERGVQMSGGQKQRIAIARAIIKSPKILLLDEATSALDSESERVVQESLDNAS 544
Query: 109 ASRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTTI++AHRLSTI +AD I V+H G+IVE GS
Sbjct: 545 IGRTTIVIAHRLSTIRNADVICVIHNGQIVETGS 578
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKST+I LL RFYD +G+I ID +I + LR +G+V Q+ VLF SI
Sbjct: 393 VGGSGSGKSTVISLLQRFYDPIAGEILIDGVSIDKLQVNWLRSQMGLVSQEPVLFATSI 451
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKSTII L+ RFYD G + ID ++I++ SLR+ I +V Q+ +LF +I+
Sbjct: 1029 VGTSGSGKSTIIGLIERFYDPLKGTVKIDGRDIRSYHLRSLRKYISLVSQEPMLFAGTIR 1088
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 206 NSIKAIQKNFVDMENMFDLLQETCDV-IDIPQAPMLCVAQGAVEFRNVSFSY--TPERAI 262
+++K + FV E + ++++ D+ + + +L +G VEF +V F+Y PE I
Sbjct: 317 SNLKYFSEAFVAWERILEVIKRVPDIDSNKKEGQILERMKGEVEFNHVKFTYLSRPETTI 376
Query: 263 LKNISFTVPAGKTLA 277
++ +PAGKT+A
Sbjct: 377 FDDLCLKIPAGKTVA 391
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MENMFDLLQETCDV-IDIPQAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGK 57
E + ++++ D+ + + +L +G VEF +V F+Y PE I ++ +PAGK
Sbjct: 329 WERILEVIKRVPDIDSNKKEGQILERMKGEVEFNHVKFTYLSRPETTIFDDLCLKIPAGK 388
Query: 58 TLALLSG 64
T+AL+ G
Sbjct: 389 TVALVGG 395
>sp|Q2KYS6|MSBA_BORA1 Lipid A export ATP-binding/permease protein MsbA OS=Bordetella
avium (strain 197N) GN=msbA PE=3 SV=1
Length = 591
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 71/89 (79%)
Query: 54 PAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTT 113
P G+ A LSGG++QR+AIAR L+K I++LDEATSALD ++ER +QS+L+R+ RTT
Sbjct: 481 PVGENAARLSGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQSSLDRLMRGRTT 540
Query: 114 IIVAHRLSTIIHADEILVMHAGEIVERGS 142
+++AHRLST+ +AD I+V+ AG IVE G+
Sbjct: 541 LVIAHRLSTVQNADRIIVLDAGRIVEHGA 569
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GK+T++ +L RF G I ID+ I V SLR + +V QD VLF+++I
Sbjct: 383 VGRSGSGKTTLVNMLPRFVLPTEGSILIDDVPINDVQLNSLRSHLSLVSQDVVLFDDTIA 442
Query: 210 A 210
A
Sbjct: 443 A 443
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 204 FNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPE--RA 261
N +QK V E++F L+ + +V D Q + +G +EFR + + PE R
Sbjct: 308 LTNLASKMQKMLVSAESVFTLVDQIPEV-DEGQRTLAEPVRGKIEFRQIGHRF-PEADRN 365
Query: 262 ILKNISFTVPAGKTLA 277
+ ++SFTV G+T+A
Sbjct: 366 TISDVSFTVEPGQTVA 381
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPE--RAILKNISFTVPAGKTL 59
E++F L+ + +V D Q + +G +EFR + + PE R + ++SFTV G+T+
Sbjct: 323 ESVFTLVDQIPEV-DEGQRTLAEPVRGKIEFRQIGHRF-PEADRNTISDVSFTVEPGQTV 380
Query: 60 ALLSGGEKQRVAIARTLLKAPQIVLLDEATSALD 93
AL+ + + L P+ VL E + +D
Sbjct: 381 ALVGRSGSGKTTLVNML---PRFVLPTEGSILID 411
>sp|Q4QPI4|MSBA_HAEI8 Lipid A export ATP-binding/permease protein MsbA OS=Haemophilus
influenzae (strain 86-028NP) GN=msbA PE=3 SV=1
Length = 587
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 80/107 (74%), Gaps = 3/107 (2%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
F G+ A LSGG++QR+AIAR LL+ +++LDEATSALDT++ER IQSAL+ +
Sbjct: 475 FDTVIGENGASLSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQSALDELKKD 534
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGK 157
RT I++AHRLSTI +ADEILV+ GEI ERG+ +LL+ Q+GA K
Sbjct: 535 RTVIVIAHRLSTIENADEILVIDHGEIRERGN-HKALLE--QNGAYK 578
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKSTI L+ RFYD+E G+I +D NI+ ++LR+ VV Q LFN++I
Sbjct: 380 VGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTI 438
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 26 AQGAVEFRNVSFSYT-PERAILKNISFTVPAGKTLALL--SGGEKQRVA 71
A+GA+EF+NVSF+Y E L NISF+VPAGKT+AL+ SG K +A
Sbjct: 343 AKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVALVGRSGSGKSTIA 391
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 243 AQGAVEFRNVSFSYT-PERAILKNISFTVPAGKTLA 277
A+GA+EF+NVSF+Y E L NISF+VPAGKT+A
Sbjct: 343 AKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVA 378
>sp|Q7N6C6|MSBA_PHOLL Lipid A export ATP-binding/permease protein MsbA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=msbA PE=3
SV=1
Length = 581
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ LLSGG++QR+AIAR LL+ +++LDEATSALDT++ER IQ+AL+ + +RT+++
Sbjct: 474 GENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLV 533
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQ 149
+AHRLSTI +ADEILV+ G IVERG +SLL+
Sbjct: 534 IAHRLSTIENADEILVVEDGHIVERGD-HLSLLE 566
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKSTI LL RFYDV G+IF+D +++ +SLR + +V Q+ LFN+++
Sbjct: 374 VGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTV 432
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 26 AQGAVEFRNVSFSY-TPERAILKNISFTVPAGKTLALL--SGGEKQRVA 71
A G +EFRNV+F Y T E L+NIS +PAGK +AL+ SG K +A
Sbjct: 337 ANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIA 385
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 243 AQGAVEFRNVSFSY-TPERAILKNISFTVPAGKTLA 277
A G +EFRNV+F Y T E L+NIS +PAGK +A
Sbjct: 337 ANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVA 372
>sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15
PE=1 SV=1
Length = 1240
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P ++LLDEATSALD+++ER +Q AL RV RT++++AHRLS
Sbjct: 1136 LSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLS 1195
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVGQSG 154
TI + D I V+ G++VERG+ SLL G +G
Sbjct: 1196 TIQNCDAIAVLDKGKLVERGT-HSSLLSKGPTG 1227
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
+SGG+KQR+AIAR ++K+P I+LLDEATSALD+++ER +Q AL RTTI++AHRLS
Sbjct: 498 MSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQEALENASIGRTTILIAHRLS 557
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI +AD I V+ G IVE GS
Sbjct: 558 TIRNADVISVVKNGHIVETGS 578
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 119 RLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFID 178
RL T I D L + +G+ V VG SG+GKST+I LL RFYD +G+I ID
Sbjct: 371 RLETSIFDDFCLRVPSGKTVA---------LVGGSGSGKSTVISLLQRFYDPLAGEILID 421
Query: 179 NQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
+I + LR +G+V Q+ LF +IK
Sbjct: 422 GVSIDKLQVKWLRSQMGLVSQEPALFATTIK 452
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKSTII L+ RFYD G + ID ++I++ SLR+ I +V Q+ LF +I+
Sbjct: 1029 VGPSGSGKSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRRHIALVSQEPTLFAGTIR 1088
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 16 DIPQAPMLCVAQGAVEFRNVSFSYTP--ERAILKNISFTVPAGKTLALLSG 64
D P L +G VEF+NV F Y E +I + VP+GKT+AL+ G
Sbjct: 345 DNPDGHKLEKIRGEVEFKNVKFVYPSRLETSIFDDFCLRVPSGKTVALVGG 395
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 233 DIPQAPMLCVAQGAVEFRNVSFSYTP--ERAILKNISFTVPAGKTLA 277
D P L +G VEF+NV F Y E +I + VP+GKT+A
Sbjct: 345 DNPDGHKLEKIRGEVEFKNVKFVYPSRLETSIFDDFCLRVPSGKTVA 391
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 28 GAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL--SGGEKQRV 70
G VEF +V FSY P+ I KN S + GK+ A++ SG K +
Sbjct: 993 GQVEFLDVDFSYPTRPDVIIFKNFSIKIEEGKSTAIVGPSGSGKSTI 1039
>sp|Q5WVN2|MSBA_LEGPL Lipid A export ATP-binding/permease protein MsbA OS=Legionella
pneumophila (strain Lens) GN=msbA PE=3 SV=1
Length = 588
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
+ G+ LLSGG++QR+AIAR +LK I++LDEATSALD+++E IQ+AL +V
Sbjct: 467 GYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMN 526
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+I+AHRLSTI HA +I+VM G IVE+GS
Sbjct: 527 GRTTLIIAHRLSTIKHAHKIIVMQHGRIVEQGS 559
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 137 IVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGV 196
++E G+ S+ VG SG+GK+TI LL RFY++ G I +D I+ +S SLR+ + +
Sbjct: 364 VIEAGT---SVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSL 420
Query: 197 VPQDTVLFNNSI 208
V Q+ LFN+++
Sbjct: 421 VSQNVTLFNDTL 432
>sp|Q3J7R8|MSBA_NITOC Lipid A export ATP-binding/permease protein MsbA OS=Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848) GN=msbA PE=3
SV=1
Length = 597
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 72/87 (82%)
Query: 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 115
G+ LLSGG++QR+AIAR LLK I++LDEAT++LDT+ ER+IQ+AL + RTT++
Sbjct: 476 GEKGVLLSGGQRQRLAIARALLKDAPILILDEATASLDTEAERHIQAALETLMRQRTTLV 535
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGS 142
+AHRLST+ +AD+I+V+H G+I+ERG+
Sbjct: 536 IAHRLSTVENADQIIVLHQGQIIERGT 562
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKST++ LL RFY+ SG I ID +I+T+ LR+ I +V Q +LFN++I
Sbjct: 376 VGHSGSGKSTLVSLLARFYETTSGRILIDEMDIQTLRLTELRRQIALVSQQIILFNDTI 434
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERA-ILKNISFTVPAGKTLA 60
+++F LL ET + Q+ L A+GA+ F ++SF Y P + +L+NI + +T+A
Sbjct: 317 QSIFGLLAETPEADRGQQS--LRRARGAIRFEHLSFCYEPAKGPVLENIDLEIKPYQTIA 374
Query: 61 LL--SGGEKQRVA--IARTLLKAPQIVLLDEATSALDTKTER 98
L+ SG K + +AR +L+DE +D +T R
Sbjct: 375 LVGHSGSGKSTLVSLLARFYETTSGRILIDE----MDIQTLR 412
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 211 IQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERA-ILKNISFT 269
+Q+ +++F LL ET + Q+ L A+GA+ F ++SF Y P + +L+NI
Sbjct: 309 LQRGIAAAQSIFGLLAETPEADRGQQS--LRRARGAIRFEHLSFCYEPAKGPVLENIDLE 366
Query: 270 VPAGKTLA 277
+ +T+A
Sbjct: 367 IKPYQTIA 374
>sp|Q21WN9|MSBA_RHOFD Lipid A export ATP-binding/permease protein MsbA OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=msbA PE=3 SV=1
Length = 581
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 54 PAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTT 113
P G+ A LSGG++QR+AIAR LLK I++LDEATSALDT++ER +Q+AL + +RTT
Sbjct: 474 PIGENGAKLSGGQRQRLAIARALLKDAPILILDEATSALDTESERQVQAALAVLMKNRTT 533
Query: 114 IIVAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTI 160
+++AHRLSTI HAD ILV+ G IVE G+ LL+ G A S +
Sbjct: 534 LVIAHRLSTIEHADCILVLDQGRIVETGT-HAELLRAGSYYANLSRL 579
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG GKSTI L+ RFY V SG + +D +I ++ ASLRQ I +V Q+ +LFN+++
Sbjct: 376 VGASGGGKSTISALIPRFYPVTSGRVLVDGIDINDITLASLRQNIALVSQNVILFNDTVG 435
Query: 210 A 210
A
Sbjct: 436 A 436
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY-TPERAILKNISFTVPAGKTLA 60
E++F+LL + D L ++G + F NVS Y ER L +ISF + AG+T+A
Sbjct: 317 ESIFELLDAAQE--DDRGKRQLLRSKGEICFDNVSLRYLGAERFALNDISFRITAGQTVA 374
Query: 61 LL--SGGEKQRVA 71
L+ SGG K ++
Sbjct: 375 LVGASGGGKSTIS 387
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 211 IQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY-TPERAILKNISFT 269
IQ+ E++F+LL + D L ++G + F NVS Y ER L +ISF
Sbjct: 309 IQRGLAASESIFELLDAAQE--DDRGKRQLLRSKGEICFDNVSLRYLGAERFALNDISFR 366
Query: 270 VPAGKTLA 277
+ AG+T+A
Sbjct: 367 ITAGQTVA 374
>sp|Q21NS8|MSBA_SACD2 Lipid A export ATP-binding/permease protein MsbA OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=msbA
PE=3 SV=1
Length = 586
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
+ PAG+ + LSGG++QR+AIAR L K I++LDEATSALD ++E+ IQSAL+ +
Sbjct: 474 GYQTPAGEDGSRLSGGQRQRIAIARALYKNAPILILDEATSALDNESEKQIQSALDELKQ 533
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+++AHRLSTI +AD ILVM G IVE G+
Sbjct: 534 GRTTLVIAHRLSTIENADTILVMDNGRIVEAGN 566
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKSTI+ LL RFYD + G I ID I+++ +LR+ I +V Q T+LFN++I
Sbjct: 381 VGSSGSGKSTIVSLLLRFYDNQQGSITIDGTPIQSLELHNLREHIALVNQQTILFNDTIA 440
Query: 210 A 210
A
Sbjct: 441 A 441
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 13 DVIDIPQAP-----MLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLALLSGGEK 67
+V+D+ P L +G VE ++V F Y + L ISF + G+T+AL+
Sbjct: 327 EVLDLQAEPNSGQQKLNAPKGRVELKDVHFGYNQDTPALNGISFAIEPGQTVALVGSSGS 386
Query: 68 QRVAIARTLLK 78
+ I LL+
Sbjct: 387 GKSTIVSLLLR 397
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 206 NSIKAIQKNFVDMENMFDLLQETCDVIDIPQAP-----MLCVAQGAVEFRNVSFSYTPER 260
NSI IQK + +F+ V+D+ P L +G VE ++V F Y +
Sbjct: 312 NSI--IQKGLAAADTIFE-------VLDLQAEPNSGQQKLNAPKGRVELKDVHFGYNQDT 362
Query: 261 AILKNISFTVPAGKTLA 277
L ISF + G+T+A
Sbjct: 363 PALNGISFAIEPGQTVA 379
>sp|Q9M0G9|AB24B_ARATH ABC transporter B family member 24, mitochondrial OS=Arabidopsis
thaliana GN=ABCB24 PE=1 SV=1
Length = 680
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Query: 51 FTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110
++ G+ +LSGGEKQRVA+AR LK+P I+L DEATSALD+KTE I L + ++
Sbjct: 565 YSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASN 624
Query: 111 RTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSG 154
RT I +AHRL+T + DEILVM G++VE+G+ V L G+SG
Sbjct: 625 RTCIFIAHRLTTAMQCDEILVMEKGKVVEKGTHEVLL---GKSG 665
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 51/59 (86%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG SG+GKSTI+R++FRF+DV+SG++ ID Q+IK V SLR +IGVVPQDTVLFN++I
Sbjct: 471 VGSSGSGKSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQDTVLFNDTI 529
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
Query: 194 IGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQETCDVIDIP---QAPMLCVAQGAVEFR 250
+GVV DTV + VDM++MF L+E D+ D + P L + G++ F
Sbjct: 393 LGVVYSDTV----------QGLVDMKSMFKFLEERSDIGDKDIDRKLPPLVLKGGSISFE 442
Query: 251 NVSFSYTPERAILKNISFTVPAGKTLA 277
NV FSY PER IL ISF VPAGK++A
Sbjct: 443 NVHFSYLPERKILDGISFEVPAGKSVA 469
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 1 MENMFDLLQETCDVIDIP---QAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGK 57
M++MF L+E D+ D + P L + G++ F NV FSY PER IL ISF VPAGK
Sbjct: 407 MKSMFKFLEERSDIGDKDIDRKLPPLVLKGGSISFENVHFSYLPERKILDGISFEVPAGK 466
Query: 58 TLALLSGGEKQRVAIARTLLK 78
++A++ + I R + +
Sbjct: 467 SVAIVGSSGSGKSTILRMIFR 487
>sp|Q9LSJ5|AB18B_ARATH ABC transporter B family member 18 OS=Arabidopsis thaliana
GN=ABCB18 PE=3 SV=1
Length = 1225
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
S+ G+ LSGG+KQR+AIAR ++K+P I+LLDEATSALD+++ER +Q AL+
Sbjct: 474 SYQTQVGERGVQLSGGQKQRIAIARAIIKSPIILLLDEATSALDSESERVVQEALDNASI 533
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTTI++AHRLSTI +AD I V+H G I+E GS
Sbjct: 534 GRTTIVIAHRLSTIRNADVICVVHNGRIIETGS 566
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P ++LLDEATSALD+++E +Q AL R+ RT++++AHRLS
Sbjct: 1121 LSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSESVVQDALERLMVGRTSVVIAHRLS 1180
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVGQSGA 155
TI D I V+ G +VE G+ SLL G GA
Sbjct: 1181 TIQKCDTIAVLENGAVVECGN-HSSLLAKGPKGA 1213
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKST+I LL RFYD +G+I ID I + LR +G+V Q+ VLF SIK
Sbjct: 381 VGGSGSGKSTVISLLQRFYDPIAGEILIDGLPINKLQVKWLRSQMGLVSQEPVLFATSIK 440
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKSTII L+ RFYD G + ID ++I++ SLRQ I +V Q+ LF +I+
Sbjct: 1014 VGPSGSGKSTIISLIERFYDPLKGIVKIDGRDIRSCHLRSLRQHIALVSQEPTLFAGTIR 1073
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 19 QAPMLCVAQGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALLSG 64
+ +L +G VEF +V F+Y PE I ++ VP+GKT+AL+ G
Sbjct: 336 EGQILEKTRGEVEFNHVKFTYPSRPETPIFDDLCLRVPSGKTVALVGG 383
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 206 NSIKAIQKNFVDMENMFDLLQETCDV-IDIPQAPMLCVAQGAVEFRNVSFSY--TPERAI 262
+++K + FV E + ++ + D + +L +G VEF +V F+Y PE I
Sbjct: 305 SNLKYFSEAFVVGERIMKVINRVPGIDSDNLEGQILEKTRGEVEFNHVKFTYPSRPETPI 364
Query: 263 LKNISFTVPAGKTLA 277
++ VP+GKT+A
Sbjct: 365 FDDLCLRVPSGKTVA 379
>sp|Q483B6|MSBA1_COLP3 Lipid A export ATP-binding/permease protein MsbA 1 OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1
PE=3 SV=1
Length = 602
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 6/125 (4%)
Query: 18 PQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLALLSGGEKQRVAIARTLL 77
P+A + + A + F+ E+ + NI G+ ALLSGG++QRVAIAR LL
Sbjct: 464 PEATEAEIIEAAKSAHVMEFAEHMEQGLETNI------GENGALLSGGQRQRVAIARALL 517
Query: 78 KAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEI 137
++LDEATSALDT++ER+IQ AL + +RT+I++AHRLSTI +AD+I+VM G+I
Sbjct: 518 CDTPFLILDEATSALDTESERHIQDALQTLQQNRTSIVIAHRLSTIENADKIIVMEQGKI 577
Query: 138 VERGS 142
VE+G+
Sbjct: 578 VEQGN 582
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
+L VG+SG+GKST LL RFYD G+I ID+ NI+ LR+ V Q VLFN
Sbjct: 393 TLALVGRSGSGKSTASSLLLRFYDATRGEILIDDTNIEQFQLKDLRKQFSYVSQQVVLFN 452
Query: 206 NSI 208
+++
Sbjct: 453 DTL 455
>sp|Q5X498|MSBA_LEGPA Lipid A export ATP-binding/permease protein MsbA OS=Legionella
pneumophila (strain Paris) GN=msbA PE=3 SV=1
Length = 588
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
+ G+ LLSGG++QR+AIAR +LK I++LDEATSALD+++E IQ+AL +V
Sbjct: 467 GYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMK 526
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+I+AHRLSTI HA +I+V+ G IVE+GS
Sbjct: 527 GRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGS 559
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 137 IVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGV 196
++E G+ S+ VG SG+GK+TI LL RFY++ G I +D I+ +S SLR+ I +
Sbjct: 364 VIEAGT---SVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQISL 420
Query: 197 VPQDTVLFNNSI 208
V Q+ LFN+++
Sbjct: 421 VSQNVTLFNDTL 432
>sp|Q39E73|MSBA_BURS3 Lipid A export ATP-binding/permease protein MsbA OS=Burkholderia
sp. (strain 383) GN=msbA PE=3 SV=2
Length = 593
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 20/141 (14%)
Query: 22 MLCVAQGAVEFR-----NVSFSYTPERAILK---------NISFTVPAG-KTLA-----L 61
M V+Q V F NV++ TP+RA ++ + +P G TL
Sbjct: 429 MAMVSQDVVLFNDTIAANVAYGQTPDRARVQAALEAANLADAVAAMPDGLDTLVGGNGMR 488
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR + K I++LDEATSALD+++ER++Q+AL R+ RTT+++AHRLS
Sbjct: 489 LSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLS 548
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI AD ILV+ AG+IVE GS
Sbjct: 549 TIERADRILVLEAGKIVEEGS 569
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
G SG+GK+T++ LL RF+D G I +D + +LR + +V QD VLFN++I A
Sbjct: 386 GPSGSGKTTLVNLLPRFFDPTDGAILVDGVPVADYDLHALRSQMAMVSQDVVLFNDTIAA 445
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 209 KAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQ--GAVEFRNVSFSY-TPERAILKN 265
+ +Q+ E +F L+ E + PQ +AQ G +EFRNV+F Y ER L
Sbjct: 316 QPLQRGMTAAELIFGLIDEPAE----PQGGGRPLAQSRGDIEFRNVTFDYGAAERPTLDR 371
Query: 266 ISFTVPAGKTLA 277
ISF V G+ +A
Sbjct: 372 ISFKVAPGEMIA 383
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 2 ENMFDLLQETCDVIDIPQAPMLCVAQ--GAVEFRNVSFSY-TPERAILKNISFTVPAGKT 58
E +F L+ E + PQ +AQ G +EFRNV+F Y ER L ISF V G+
Sbjct: 326 ELIFGLIDEPAE----PQGGGRPLAQSRGDIEFRNVTFDYGAAERPTLDRISFKVAPGEM 381
Query: 59 LAL 61
+AL
Sbjct: 382 IAL 384
>sp|Q1BUV6|MSBA_BURCA Lipid A export ATP-binding/permease protein MsbA OS=Burkholderia
cenocepacia (strain AU 1054) GN=msbA PE=3 SV=2
Length = 593
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 20/141 (14%)
Query: 22 MLCVAQGAVEFR-----NVSFSYTPERAILK---------NISFTVPAG-KTLA-----L 61
M V+Q V F NV++ TP+RA ++ + +P G TL
Sbjct: 429 MAMVSQDVVLFNDTIAANVAYGQTPDRARVQAALEAANLADAVAAMPDGLDTLVGGNGMR 488
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR + K I++LDEATSALD+++ER++Q+AL R+ RTT+++AHRLS
Sbjct: 489 LSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLS 548
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI AD ILV+ AG+IVE GS
Sbjct: 549 TIERADRILVLEAGKIVEEGS 569
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
G SG+GK+T++ LL RF+D G I +D + +LR + +V QD VLFN++I A
Sbjct: 386 GPSGSGKTTLVNLLPRFFDPTDGTILVDGVPVSDYDLHALRSQMAMVSQDVVLFNDTIAA 445
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 209 KAIQKNFVDMENMFDLLQETCDVIDIPQAPM--LCVAQGAVEFRNVSFSY-TPERAILKN 265
+ +Q+ E +F L+ E + PQ L A+G +EFR VSF Y ER L
Sbjct: 316 QPLQRGMTAAELIFGLIDEPAE----PQGGGRPLSQARGEIEFRAVSFDYGAAERPTLDR 371
Query: 266 ISFTVPAGKTLA 277
ISF V G+ +A
Sbjct: 372 ISFKVAPGEMIA 383
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 14 VIDIPQAPM-----LCVAQGAVEFRNVSFSY-TPERAILKNISFTVPAGKTLAL 61
+ID P P L A+G +EFR VSF Y ER L ISF V G+ +AL
Sbjct: 331 LIDEPAEPQGGGRPLSQARGEIEFRAVSFDYGAAERPTLDRISFKVAPGEMIAL 384
>sp|Q5ZUH9|MSBA_LEGPH Lipid A export ATP-binding/permease protein MsbA OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2
Length = 588
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 50 SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109
+ G+ LLSGG++QR+AIAR +LK I++LDEATSALD+++E IQ+AL +V
Sbjct: 467 GYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMK 526
Query: 110 SRTTIIVAHRLSTIIHADEILVMHAGEIVERGS 142
RTT+I+AHRLSTI HA +I+V+ G IVE+GS
Sbjct: 527 GRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGS 559
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 137 IVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGV 196
++E G+ S+ VG SG+GK+TI LL RFY++ G I +D I+ +S SLR+ + +
Sbjct: 364 VIEAGT---SVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSL 420
Query: 197 VPQDTVLFNNSI 208
V Q+ LFN+++
Sbjct: 421 VSQNVTLFNDTL 432
>sp|Q5H0H0|MSBA_XANOR Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=msbA
PE=3 SV=1
Length = 589
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 70/90 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR +LK I++LDEAT+ALD ++ER +Q AL+++ RTT+++AHRLS
Sbjct: 485 LSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLS 544
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVG 151
TI HAD++LVM G IVERG+ L Q G
Sbjct: 545 TIEHADQVLVMDQGRIVERGTHHELLAQGG 574
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKS++I+L+ RFYD E+G I +D Q ++ + A LR+ I +V Q +LF+ SI
Sbjct: 379 VGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSI 437
>sp|Q2P3E7|MSBA_XANOM Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1
Length = 589
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 70/90 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR +LK I++LDEAT+ALD ++ER +Q AL+++ RTT+++AHRLS
Sbjct: 485 LSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLS 544
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVG 151
TI HAD++LVM G IVERG+ L Q G
Sbjct: 545 TIEHADQVLVMDQGRIVERGTHHELLAQGG 574
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208
VG+SG+GKS++I+L+ RFYD E+G I +D Q ++ + A LR+ I +V Q +LF+ SI
Sbjct: 379 VGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSI 437
>sp|Q6YUU5|MDR_ORYSJ Putative multidrug resistance protein OS=Oryza sativa subsp. japonica
GN=Os02g0190300 PE=3 SV=1
Length = 1245
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR+AIAR +LK P I+LLDEATSALD+++E+ +Q AL+RV RT+++VAHRLS
Sbjct: 1136 LSGGQKQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIGRTSVVVAHRLS 1195
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVGQSG 154
TI + D I V+ G +VE+G+ SL+ G SG
Sbjct: 1196 TIQNCDLITVLEKGTVVEKGT-HASLMAKGLSG 1227
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 66/80 (82%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
+SGG+KQR+AIAR +LK+P+I+LLDEATSALDT++ER +Q AL+ RTTI++AHRLS
Sbjct: 498 MSGGQKQRIAIARAILKSPKILLLDEATSALDTESERVVQEALDLASMGRTTIVIAHRLS 557
Query: 122 TIIHADEILVMHAGEIVERG 141
TI +AD I VM +GE+ E G
Sbjct: 558 TIRNADIIAVMQSGEVKELG 577
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VGQSG+GKSTII L+ RFYD G + ID ++IK + +LR+ IG+V Q+ LF +I+
Sbjct: 1031 VGQSGSGKSTIIGLIERFYDPIRGSVKIDGRDIKAYNLRALRRHIGLVSQEPTLFAGTIR 1090
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG SG+GKST+I LL RFYD +G++ +D +I+ + LR +G+V Q+ LF SI+
Sbjct: 393 VGGSGSGKSTVIALLERFYDPSAGEVMVDGVDIRRLRLKWLRAQMGLVSQEPALFATSIR 452
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 28 GAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALLSG-GEKQRVAIA 73
G VEFRNV F Y PE I + + VPAG+T+AL+ G G + IA
Sbjct: 357 GEVEFRNVEFCYPSRPESPIFVSFNLRVPAGRTVALVGGSGSGKSTVIA 405
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 245 GAVEFRNVSFSY--TPERAILKNISFTVPAGKTLA 277
G VEFRNV F Y PE I + + VPAG+T+A
Sbjct: 357 GEVEFRNVEFCYPSRPESPIFVSFNLRVPAGRTVA 391
>sp|Q7VWD8|MSBA_BORPE Lipid A export ATP-binding/permease protein MsbA OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=msbA PE=3 SV=1
Length = 623
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 71/93 (76%)
Query: 49 ISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC 108
+ P G+ A LSGG++QR+AIAR L+K +++LDEATSALD ++ER +Q++L R+
Sbjct: 508 LGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLM 567
Query: 109 ASRTTIIVAHRLSTIIHADEILVMHAGEIVERG 141
RTT+++AHRLST+ +AD I+V+ AG+IVE G
Sbjct: 568 RGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHG 600
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDI 175
V+HR AD V +VE G ++ VG+SG+GK+T++ +L RF + GDI
Sbjct: 387 VSHRFP---DADRDTVSAVSFLVEPGQ---TVALVGRSGSGKTTLVNMLPRFVLPDGGDI 440
Query: 176 FIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
D+ I+ ++ SLR + +V QD VLF+++I A
Sbjct: 441 LFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAA 475
>sp|Q3BTC8|MSBA_XANC5 Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=msbA PE=3
SV=1
Length = 589
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 70/90 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR +LK +++LDEAT+ALD ++ER +Q AL+++ RTT+++AHRLS
Sbjct: 485 LSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLS 544
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVG 151
TI HAD++LVM G IVERG+ L Q G
Sbjct: 545 TIEHADQVLVMDQGRIVERGTHHQLLAQGG 574
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKS++I+L+ RFY+ E+G I +D ++ + A LR+ I +V Q +LF+ SI
Sbjct: 379 VGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSI- 437
Query: 210 AIQKNFVDMEN 220
A F +M N
Sbjct: 438 ADNVAFGEMRN 448
>sp|Q7W9N7|MSBA_BORPA Lipid A export ATP-binding/permease protein MsbA OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=msbA PE=3 SV=1
Length = 623
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 71/93 (76%)
Query: 49 ISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC 108
+ P G+ A LSGG++QR+AIAR L+K +++LDEATSALD ++ER +Q++L R+
Sbjct: 508 LGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLM 567
Query: 109 ASRTTIIVAHRLSTIIHADEILVMHAGEIVERG 141
RTT+++AHRLST+ +AD I+V+ AG+IVE G
Sbjct: 568 RGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHG 600
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDI 175
V+HR AD V +VE G ++ VG+SG+GK+T++ +L RF + GDI
Sbjct: 387 VSHRFP---DADRDTVSAVSFLVEPGQ---TVALVGRSGSGKTTLVNMLPRFVLPDGGDI 440
Query: 176 FIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
D+ I+ ++ SLR + +V QD VLF+++I A
Sbjct: 441 LFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAA 475
>sp|Q7WH20|MSBA_BORBR Lipid A export ATP-binding/permease protein MsbA OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=msbA PE=3 SV=2
Length = 623
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 71/93 (76%)
Query: 49 ISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC 108
+ P G+ A LSGG++QR+AIAR L+K +++LDEATSALD ++ER +Q++L R+
Sbjct: 508 LGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLM 567
Query: 109 ASRTTIIVAHRLSTIIHADEILVMHAGEIVERG 141
RTT+++AHRLST+ +AD I+V+ AG+IVE G
Sbjct: 568 RGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHG 600
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 116 VAHRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDI 175
V+HR AD V +VE G ++ VG+SG+GK+T++ +L RF + GDI
Sbjct: 387 VSHRFP---DADRDTVSAVSFLVEPGQ---TVALVGRSGSGKTTLVNMLPRFVLPDGGDI 440
Query: 176 FIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
D+ I+ ++ SLR + +V QD VLF+++I A
Sbjct: 441 LFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAA 475
>sp|Q8PKS5|MSBA_XANAC Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=msbA PE=3 SV=1
Length = 589
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 70/90 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR +LK +++LDEAT+ALD ++ER +Q AL+++ RTT+++AHRLS
Sbjct: 485 LSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLS 544
Query: 122 TIIHADEILVMHAGEIVERGSLFVSLLQVG 151
TI HAD++LVM G IVERG+ L Q G
Sbjct: 545 TIEHADQVLVMDQGRIVERGTHHQLLAQGG 574
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKS++I+L+ RFY+ E+G I +D ++ + A LR+ I +V Q +LF+ SI
Sbjct: 379 VGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSI- 437
Query: 210 AIQKNFVDMEN 220
A F +M N
Sbjct: 438 ADNVAFGEMRN 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,921,620
Number of Sequences: 539616
Number of extensions: 3541581
Number of successful extensions: 23395
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3601
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 12750
Number of HSP's gapped (non-prelim): 9995
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)