Query psy18009
Match_columns 277
No_of_seqs 320 out of 2619
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 19:58:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18009.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18009hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 100.0 8E-34 2.7E-38 304.9 20.7 140 2-141 387-634 (1321)
2 3g5u_A MCG1178, multidrug resi 100.0 2.3E-33 7.8E-38 300.7 16.8 138 2-139 359-604 (1284)
3 3nh6_A ATP-binding cassette SU 100.0 9.8E-31 3.4E-35 242.2 13.5 147 1-147 25-276 (306)
4 1yqt_A RNAse L inhibitor; ATP- 100.0 2.9E-30 1E-34 255.1 11.8 180 43-235 140-392 (538)
5 3ozx_A RNAse L inhibitor; ATP 100.0 5.9E-30 2E-34 253.0 12.9 179 43-235 120-376 (538)
6 3bk7_A ABC transporter ATP-bin 100.0 1.7E-29 5.9E-34 252.9 13.1 180 43-235 210-462 (607)
7 4f4c_A Multidrug resistance pr 100.0 8.5E-30 2.9E-34 273.8 11.2 147 2-148 1049-1304(1321)
8 3qf4_A ABC transporter, ATP-bi 99.9 7.1E-28 2.4E-32 240.0 14.5 146 2-147 314-565 (587)
9 4a82_A Cystic fibrosis transme 99.9 9.4E-28 3.2E-32 238.6 15.1 145 2-146 312-562 (578)
10 3j16_B RLI1P; ribosome recycli 99.9 1.1E-27 3.8E-32 239.8 13.8 180 43-235 203-458 (608)
11 3qf4_B Uncharacterized ABC tra 99.9 1.5E-27 5E-32 238.1 13.8 144 2-146 328-576 (598)
12 2iw3_A Elongation factor 3A; a 99.9 2.2E-27 7.4E-32 247.4 14.2 147 43-202 529-746 (986)
13 3gfo_A Cobalt import ATP-bindi 99.9 1.1E-26 3.8E-31 211.8 13.6 102 44-145 126-230 (275)
14 3b60_A Lipid A export ATP-bind 99.9 2.4E-26 8.1E-31 228.5 14.6 143 2-146 316-565 (582)
15 3tui_C Methionine import ATP-b 99.9 1.3E-26 4.5E-31 219.2 12.2 84 62-145 164-250 (366)
16 3b5x_A Lipid A export ATP-bind 99.9 2.9E-26 9.9E-31 227.9 14.8 142 2-145 316-564 (582)
17 2yl4_A ATP-binding cassette SU 99.9 3.1E-26 1.1E-30 228.3 14.4 145 2-146 313-568 (595)
18 3ux8_A Excinuclease ABC, A sub 99.9 1.1E-26 3.9E-31 234.2 7.6 97 46-142 186-292 (670)
19 4g1u_C Hemin import ATP-bindin 99.9 4.8E-26 1.7E-30 206.5 11.0 89 57-145 137-234 (266)
20 3rlf_A Maltose/maltodextrin im 99.9 9.4E-26 3.2E-30 214.4 12.0 102 44-145 116-220 (381)
21 2ff7_A Alpha-hemolysin translo 99.9 2.9E-25 1E-29 199.1 13.5 89 56-144 140-228 (247)
22 3g5u_A MCG1178, multidrug resi 99.9 1.7E-25 5.8E-30 239.9 14.1 146 2-147 1002-1257(1284)
23 1g6h_A High-affinity branched- 99.9 6E-25 2.1E-29 197.9 12.8 102 43-144 135-238 (257)
24 2ghi_A Transport protein; mult 99.9 1.2E-24 4.2E-29 196.5 13.4 90 56-145 150-239 (260)
25 1mv5_A LMRA, multidrug resista 99.9 2.4E-25 8.2E-30 198.9 7.6 89 56-144 134-222 (243)
26 3gd7_A Fusion complex of cysti 99.9 5.9E-25 2E-29 209.5 10.7 123 24-146 14-240 (390)
27 3tif_A Uncharacterized ABC tra 99.9 1.2E-24 4.1E-29 193.7 12.0 100 44-143 127-229 (235)
28 2pcj_A ABC transporter, lipopr 99.9 1.2E-24 4.2E-29 192.2 11.8 100 43-142 122-222 (224)
29 2cbz_A Multidrug resistance-as 99.9 1.2E-24 4.1E-29 193.9 11.5 90 55-144 121-213 (237)
30 2vf7_A UVRA2, excinuclease ABC 99.9 2.1E-25 7.2E-30 229.9 7.2 98 45-142 362-469 (842)
31 1b0u_A Histidine permease; ABC 99.9 1.1E-24 3.8E-29 197.0 10.9 102 43-144 134-238 (262)
32 2olj_A Amino acid ABC transpor 99.9 1.9E-24 6.6E-29 195.8 12.1 102 43-144 141-244 (263)
33 2pze_A Cystic fibrosis transme 99.9 9.5E-25 3.3E-29 193.5 9.7 88 57-144 126-214 (229)
34 2onk_A Molybdate/tungstate ABC 99.9 1.5E-24 5.1E-29 193.9 10.7 102 43-144 108-212 (240)
35 3fvq_A Fe(3+) IONS import ATP- 99.9 2.7E-24 9.3E-29 202.9 11.6 103 43-145 120-225 (359)
36 1ji0_A ABC transporter; ATP bi 99.9 3E-24 1E-28 191.5 11.2 100 44-143 121-223 (240)
37 1vpl_A ABC transporter, ATP-bi 99.9 4.6E-24 1.6E-28 192.6 11.7 102 43-144 128-231 (256)
38 2ihy_A ABC transporter, ATP-bi 99.9 4.9E-24 1.7E-28 194.6 11.8 102 43-144 143-248 (279)
39 2yz2_A Putative ABC transporte 99.9 7E-24 2.4E-28 192.0 12.2 102 43-144 118-223 (266)
40 2d2e_A SUFC protein; ABC-ATPas 99.9 6.3E-24 2.2E-28 190.5 11.0 102 43-144 123-229 (250)
41 1z47_A CYSA, putative ABC-tran 99.9 8.2E-24 2.8E-28 199.4 12.0 103 43-145 127-232 (355)
42 2nq2_C Hypothetical ABC transp 99.9 9.7E-24 3.3E-28 189.9 11.4 101 43-144 110-213 (253)
43 2yyz_A Sugar ABC transporter, 99.9 1.1E-23 3.7E-28 198.8 12.2 103 43-145 115-220 (359)
44 1oxx_K GLCV, glucose, ABC tran 99.9 7.7E-24 2.6E-28 199.4 10.9 103 43-145 122-227 (353)
45 2ixe_A Antigen peptide transpo 99.9 1.2E-23 4.1E-28 191.1 11.7 100 46-145 139-242 (271)
46 3d31_A Sulfate/molybdate ABC t 99.9 1E-23 3.5E-28 198.2 11.4 103 43-145 109-214 (348)
47 2it1_A 362AA long hypothetical 99.9 8.5E-24 2.9E-28 199.8 10.8 103 43-145 115-220 (362)
48 1g29_1 MALK, maltose transport 99.9 1.2E-23 4E-28 199.5 11.6 103 43-145 121-226 (372)
49 2r6f_A Excinuclease ABC subuni 99.9 1.3E-23 4.5E-28 218.0 12.6 98 45-142 487-594 (972)
50 2zu0_C Probable ATP-dependent 99.9 2.2E-23 7.4E-28 188.9 11.9 102 43-144 144-250 (267)
51 2pjz_A Hypothetical protein ST 99.9 3.1E-23 1E-27 187.9 12.2 100 43-144 109-211 (263)
52 1v43_A Sugar-binding transport 99.9 1.4E-23 4.9E-28 198.9 10.3 103 43-145 123-228 (372)
53 2qi9_C Vitamin B12 import ATP- 99.9 1.9E-23 6.5E-28 187.8 10.6 102 43-144 108-218 (249)
54 3pih_A Uvrabc system protein A 99.9 2.6E-23 8.8E-28 216.0 12.6 98 45-142 447-554 (916)
55 2ygr_A Uvrabc system protein A 99.9 6E-23 2E-27 213.7 10.5 98 45-142 504-611 (993)
56 3j16_B RLI1P; ribosome recycli 99.8 2.6E-21 8.8E-26 193.7 10.3 104 43-146 449-557 (608)
57 2bbs_A Cystic fibrosis transme 99.8 2.2E-21 7.4E-26 178.1 8.5 89 56-144 154-243 (290)
58 1yqt_A RNAse L inhibitor; ATP- 99.8 6.3E-21 2.1E-25 188.4 11.8 103 43-145 383-490 (538)
59 3ozx_A RNAse L inhibitor; ATP 99.8 6.5E-21 2.2E-25 188.4 11.7 101 43-143 367-472 (538)
60 1sgw_A Putative ABC transporte 99.8 1.1E-21 3.7E-26 172.7 5.4 93 43-137 116-210 (214)
61 3ux8_A Excinuclease ABC, A sub 99.8 1.2E-20 4E-25 190.3 11.7 102 44-145 525-637 (670)
62 3bk7_A ABC transporter ATP-bin 99.8 1.4E-20 4.9E-25 188.3 11.0 103 43-145 453-560 (607)
63 3pih_A Uvrabc system protein A 99.8 3.2E-20 1.1E-24 192.9 11.6 103 44-146 787-900 (916)
64 3qf7_A RAD50; ABC-ATPase, ATPa 99.8 2.9E-20 9.9E-25 175.2 9.6 84 56-139 274-364 (365)
65 1f2t_B RAD50 ABC-ATPase; DNA d 99.8 8.1E-20 2.8E-24 152.2 9.9 82 55-137 51-142 (148)
66 2vf7_A UVRA2, excinuclease ABC 99.8 3.1E-19 1.1E-23 184.1 10.7 102 44-145 712-824 (842)
67 2r6f_A Excinuclease ABC subuni 99.8 4.4E-19 1.5E-23 184.3 11.2 102 44-145 827-939 (972)
68 2ygr_A Uvrabc system protein A 99.8 7.1E-19 2.4E-23 183.2 11.9 102 44-145 845-957 (993)
69 2iw3_A Elongation factor 3A; a 99.8 1.4E-19 4.7E-24 188.9 6.4 98 43-142 881-981 (986)
70 4aby_A DNA repair protein RECN 99.7 4.7E-18 1.6E-22 160.6 11.3 83 58-140 291-380 (415)
71 3kta_B Chromosome segregation 99.7 4.6E-17 1.6E-21 138.8 11.0 81 56-136 59-145 (173)
72 1e69_A Chromosome segregation 99.7 6.7E-17 2.3E-21 149.2 11.7 84 55-138 213-302 (322)
73 4ad8_A DNA repair protein RECN 99.7 6.5E-17 2.2E-21 158.4 7.9 81 56-136 391-474 (517)
74 3qkt_A DNA double-strand break 99.6 5.9E-16 2E-20 143.9 9.4 79 54-133 241-327 (339)
75 2o5v_A DNA replication and rep 99.6 6.4E-16 2.2E-20 145.7 8.8 84 56-144 259-352 (359)
76 3auy_A DNA double-strand break 99.5 3.6E-14 1.2E-18 133.4 10.3 77 57-134 276-360 (371)
77 2npi_A Protein CLP1; CLP1-PCF1 99.5 1.4E-15 4.8E-20 147.7 0.5 96 43-144 219-334 (460)
78 4gp7_A Metallophosphoesterase; 99.5 1.3E-15 4.3E-20 128.2 0.1 70 60-129 82-168 (171)
79 1w1w_A Structural maintenance 99.5 6.8E-14 2.3E-18 133.7 9.8 77 57-133 329-410 (430)
80 1ye8_A Protein THEP1, hypothet 99.5 3.4E-14 1.2E-18 121.0 6.3 80 54-139 69-159 (178)
81 3tif_A Uncharacterized ABC tra 99.4 4.9E-13 1.7E-17 118.6 11.3 86 150-235 37-135 (235)
82 2pcj_A ABC transporter, lipopr 99.4 1.1E-12 3.9E-17 115.3 11.9 86 150-235 36-131 (224)
83 2olj_A Amino acid ABC transpor 99.4 1E-12 3.6E-17 118.6 11.9 86 150-235 56-150 (263)
84 1g6h_A High-affinity branched- 99.4 7.1E-13 2.4E-17 118.9 10.4 86 150-235 39-144 (257)
85 2ixe_A Antigen peptide transpo 99.4 3.1E-13 1.1E-17 122.4 7.9 61 150-210 51-111 (271)
86 1vpl_A ABC transporter, ATP-bi 99.4 1.6E-12 5.3E-17 117.0 12.3 85 150-235 47-137 (256)
87 1ji0_A ABC transporter; ATP bi 99.4 1.6E-12 5.3E-17 115.6 10.5 85 150-234 38-129 (240)
88 1b0u_A Histidine permease; ABC 99.4 3E-12 1E-16 115.3 11.8 86 150-235 38-143 (262)
89 2yz2_A Putative ABC transporte 99.4 1E-12 3.5E-17 118.5 8.4 83 150-235 39-127 (266)
90 2ihy_A ABC transporter, ATP-bi 99.4 1.9E-12 6.5E-17 117.8 9.7 86 150-235 53-152 (279)
91 3fvq_A Fe(3+) IONS import ATP- 99.4 1.3E-12 4.5E-17 123.1 8.7 86 150-235 36-129 (359)
92 1sgw_A Putative ABC transporte 99.3 4.2E-12 1.4E-16 111.4 10.7 82 150-236 41-126 (214)
93 1z47_A CYSA, putative ABC-tran 99.3 5E-12 1.7E-16 119.0 11.7 84 150-235 47-136 (355)
94 2it1_A 362AA long hypothetical 99.3 9.1E-12 3.1E-16 117.5 11.5 84 150-235 35-124 (362)
95 2yyz_A Sugar ABC transporter, 99.3 7.4E-12 2.5E-16 118.0 10.0 84 150-235 35-124 (359)
96 1v43_A Sugar-binding transport 99.3 7.9E-12 2.7E-16 118.3 9.9 84 150-235 43-132 (372)
97 1tf7_A KAIC; homohexamer, hexa 99.3 2.2E-12 7.6E-17 126.4 6.1 81 55-136 347-444 (525)
98 1g29_1 MALK, maltose transport 99.3 1.2E-11 4.2E-16 116.9 10.8 85 149-235 34-130 (372)
99 2d2e_A SUFC protein; ABC-ATPas 99.3 1.3E-11 4.5E-16 110.2 10.3 86 150-235 35-132 (250)
100 1tf7_A KAIC; homohexamer, hexa 99.3 1E-12 3.5E-17 128.8 2.8 67 68-134 126-209 (525)
101 2zu0_C Probable ATP-dependent 99.3 2.6E-11 8.7E-16 109.5 11.4 87 150-236 52-154 (267)
102 1oxx_K GLCV, glucose, ABC tran 99.3 9.3E-12 3.2E-16 117.0 8.3 86 150-235 37-131 (353)
103 3d31_A Sulfate/molybdate ABC t 99.3 2.1E-11 7.3E-16 114.4 10.7 84 149-235 31-118 (348)
104 3gfo_A Cobalt import ATP-bindi 99.2 1.7E-11 5.8E-16 111.4 9.7 87 149-235 39-134 (275)
105 2v9p_A Replication protein E1; 99.2 9.3E-15 3.2E-19 135.0 -14.5 119 2-145 76-263 (305)
106 2ff7_A Alpha-hemolysin translo 99.2 4E-11 1.4E-15 107.0 9.4 62 149-210 40-101 (247)
107 3b85_A Phosphate starvation-in 99.2 5.2E-13 1.8E-17 116.6 -3.2 55 65-124 108-162 (208)
108 2pt7_A CAG-ALFA; ATPase, prote 99.2 5.6E-13 1.9E-17 123.9 -3.5 94 32-136 151-291 (330)
109 3tui_C Methionine import ATP-b 99.2 1.4E-10 4.8E-15 109.5 12.2 87 149-235 59-154 (366)
110 4g1u_C Hemin import ATP-bindin 99.2 7.7E-11 2.6E-15 106.4 9.9 87 149-235 42-132 (266)
111 2pjz_A Hypothetical protein ST 99.2 1.9E-11 6.3E-16 110.4 5.4 82 149-235 35-118 (263)
112 3nh6_A ATP-binding cassette SU 99.2 2.7E-11 9.2E-16 111.8 6.6 63 149-211 85-147 (306)
113 1mv5_A LMRA, multidrug resista 99.2 2.5E-11 8.5E-16 107.9 5.9 87 149-235 33-119 (243)
114 3rlf_A Maltose/maltodextrin im 99.1 2.5E-10 8.7E-15 108.3 11.6 85 149-235 34-124 (381)
115 2nq2_C Hypothetical ABC transp 99.1 1.3E-10 4.3E-15 104.2 8.8 73 150-235 37-119 (253)
116 2qi9_C Vitamin B12 import ATP- 99.1 2.2E-10 7.4E-15 102.6 9.5 85 149-235 31-117 (249)
117 2ghi_A Transport protein; mult 99.0 3.1E-10 1E-14 102.0 7.8 61 149-210 51-111 (260)
118 3b5x_A Lipid A export ATP-bind 99.0 4.1E-10 1.4E-14 111.7 9.2 63 149-211 374-436 (582)
119 3b60_A Lipid A export ATP-bind 99.0 4.7E-10 1.6E-14 111.2 8.8 62 149-210 374-435 (582)
120 2onk_A Molybdate/tungstate ABC 99.0 3.8E-10 1.3E-14 100.4 7.3 86 148-235 28-117 (240)
121 2yl4_A ATP-binding cassette SU 99.0 5.6E-10 1.9E-14 111.0 9.1 63 149-211 375-437 (595)
122 3thx_A DNA mismatch repair pro 99.0 3.6E-10 1.2E-14 117.9 7.9 82 61-142 721-807 (934)
123 3gd7_A Fusion complex of cysti 99.0 5.7E-10 2E-14 106.1 7.6 84 149-235 52-135 (390)
124 4a82_A Cystic fibrosis transme 99.0 5.9E-10 2E-14 110.5 7.9 63 149-211 372-434 (578)
125 3qf4_B Uncharacterized ABC tra 99.0 6.1E-10 2.1E-14 110.9 7.0 62 149-210 386-447 (598)
126 2o8b_B DNA mismatch repair pro 98.9 9E-10 3.1E-14 116.0 7.7 75 62-138 852-930 (1022)
127 3qf4_A ABC transporter, ATP-bi 98.9 7.7E-10 2.6E-14 110.0 6.1 63 149-211 374-436 (587)
128 1tq4_A IIGP1, interferon-induc 98.9 3.2E-11 1.1E-15 115.6 -4.4 92 43-136 138-255 (413)
129 1cr0_A DNA primase/helicase; R 98.9 4.8E-09 1.6E-13 94.6 8.4 77 60-137 128-237 (296)
130 3thx_B DNA mismatch repair pro 98.8 2.3E-09 7.9E-14 111.7 6.7 92 45-137 719-814 (918)
131 2pze_A Cystic fibrosis transme 98.8 8E-09 2.7E-13 90.9 6.8 49 149-210 39-87 (229)
132 2cbz_A Multidrug resistance-as 98.8 5.5E-09 1.9E-13 92.5 5.5 49 149-210 36-84 (237)
133 2dpy_A FLII, flagellum-specifi 98.7 6.9E-10 2.4E-14 106.9 -2.6 71 62-143 259-339 (438)
134 2w0m_A SSO2452; RECA, SSPF, un 98.7 2.4E-08 8.1E-13 85.2 6.8 75 62-136 104-193 (235)
135 2ehv_A Hypothetical protein PH 98.7 1.8E-08 6.2E-13 87.3 5.1 72 63-134 119-207 (251)
136 2bbs_A Cystic fibrosis transme 98.6 1.8E-08 6.3E-13 92.0 5.0 49 149-210 69-117 (290)
137 1znw_A Guanylate kinase, GMP k 98.6 2.4E-10 8.4E-15 98.2 -8.7 59 75-133 137-202 (207)
138 1nlf_A Regulatory protein REPA 98.6 4.9E-08 1.7E-12 87.4 5.8 75 46-123 103-184 (279)
139 2cvh_A DNA repair and recombin 98.5 2.2E-07 7.5E-12 78.9 8.2 77 59-135 82-185 (220)
140 3b9q_A Chloroplast SRP recepto 98.5 1.6E-08 5.4E-13 92.8 1.1 82 46-138 189-285 (302)
141 2obl_A ESCN; ATPase, hydrolase 98.4 1.4E-08 4.9E-13 94.9 -1.9 71 62-143 172-250 (347)
142 1wb9_A DNA mismatch repair pro 98.4 1.2E-07 4E-12 97.7 4.2 80 60-140 668-750 (800)
143 1ewq_A DNA mismatch repair pro 98.4 1.8E-07 6E-12 95.9 5.2 64 61-126 635-704 (765)
144 4a74_A DNA repair and recombin 98.4 2.6E-07 9E-12 78.9 4.7 75 62-136 100-201 (231)
145 2og2_A Putative signal recogni 98.4 9.3E-08 3.2E-12 89.9 1.9 82 46-138 246-342 (359)
146 3sop_A Neuronal-specific septi 98.3 5.2E-08 1.8E-12 87.9 -0.1 62 56-124 93-154 (270)
147 1z6g_A Guanylate kinase; struc 98.3 2.6E-09 9E-14 92.9 -9.9 51 60-110 121-176 (218)
148 2i3b_A HCR-ntpase, human cance 98.3 4.2E-08 1.5E-12 84.0 -2.2 83 55-140 77-168 (189)
149 3sop_A Neuronal-specific septi 98.2 1.7E-07 5.7E-12 84.6 0.4 51 148-201 6-56 (270)
150 3aez_A Pantothenate kinase; tr 98.2 4.3E-09 1.5E-13 97.0 -10.3 83 45-136 161-246 (312)
151 2eyu_A Twitching motility prot 98.2 7.2E-07 2.5E-11 80.0 3.3 60 69-134 88-147 (261)
152 1pzn_A RAD51, DNA repair and r 98.1 1.8E-06 6.3E-11 80.4 4.7 80 63-142 208-309 (349)
153 3b85_A Phosphate starvation-in 98.1 1.7E-07 5.9E-12 81.4 -2.6 49 149-201 27-75 (208)
154 3jvv_A Twitching mobility prot 98.0 2.3E-06 7.9E-11 80.2 2.9 59 71-135 188-246 (356)
155 1s96_A Guanylate kinase, GMP k 98.0 1.5E-06 5.3E-11 75.9 1.3 54 149-206 21-76 (219)
156 1pui_A ENGB, probable GTP-bind 98.0 2.5E-06 8.5E-11 71.8 2.3 65 46-110 133-199 (210)
157 1u0l_A Probable GTPase ENGC; p 97.9 2.3E-06 7.9E-11 77.9 1.7 54 149-202 174-230 (301)
158 3tr0_A Guanylate kinase, GMP k 97.9 2.9E-06 1E-10 71.3 2.1 54 149-206 12-65 (205)
159 1z6g_A Guanylate kinase; struc 97.9 1.5E-06 5.2E-11 75.3 0.1 54 149-206 28-82 (218)
160 1znw_A Guanylate kinase, GMP k 97.9 2.3E-06 7.9E-11 73.1 1.2 53 149-205 25-77 (207)
161 3b9q_A Chloroplast SRP recepto 97.9 3.1E-06 1.1E-10 77.5 1.9 54 149-202 105-164 (302)
162 1qhl_A Protein (cell division 97.9 1.4E-06 4.7E-11 76.9 -0.5 53 148-200 31-91 (227)
163 1rj9_A FTSY, signal recognitio 97.8 7.6E-06 2.6E-10 75.0 2.9 53 149-201 107-165 (304)
164 2dpy_A FLII, flagellum-specifi 97.8 9.2E-06 3.2E-10 78.1 3.3 61 149-209 162-232 (438)
165 2npi_A Protein CLP1; CLP1-PCF1 97.8 3.5E-06 1.2E-10 81.6 -0.1 44 149-201 143-188 (460)
166 2gza_A Type IV secretion syste 97.8 1.1E-05 3.7E-10 75.4 3.1 58 150-209 181-242 (361)
167 2og2_A Putative signal recogni 97.7 7.8E-06 2.7E-10 76.8 1.9 54 149-202 162-221 (359)
168 3szr_A Interferon-induced GTP- 97.7 3.1E-06 1.1E-10 84.5 -1.6 53 149-201 50-106 (608)
169 2yv5_A YJEQ protein; hydrolase 97.7 7.6E-06 2.6E-10 74.6 1.0 52 149-201 170-224 (302)
170 2f1r_A Molybdopterin-guanine d 97.7 3E-06 1E-10 71.4 -1.7 56 149-204 7-73 (171)
171 1htw_A HI0065; nucleotide-bind 97.6 1.2E-05 4E-10 66.8 1.2 54 149-208 38-91 (158)
172 2yhs_A FTSY, cell division pro 97.6 1.8E-05 6E-10 77.5 1.9 53 149-201 298-356 (503)
173 2i3b_A HCR-ntpase, human cance 97.6 7.1E-06 2.4E-10 70.1 -0.9 48 149-200 6-53 (189)
174 3e70_C DPA, signal recognition 97.5 3.9E-05 1.3E-09 71.0 3.1 53 149-201 134-192 (328)
175 3asz_A Uridine kinase; cytidin 97.5 9.8E-08 3.4E-12 81.3 -13.8 77 44-120 72-161 (211)
176 2qnr_A Septin-2, protein NEDD5 97.5 1.1E-05 3.7E-10 73.6 -1.5 57 57-121 109-168 (301)
177 1sxj_E Activator 1 40 kDa subu 97.4 0.00011 3.9E-09 66.7 5.3 48 76-124 131-178 (354)
178 2rcn_A Probable GTPase ENGC; Y 97.4 4.5E-05 1.5E-09 71.6 2.4 83 149-235 220-305 (358)
179 1n0w_A DNA repair protein RAD5 97.4 0.00028 9.7E-09 60.3 7.3 75 61-135 98-209 (243)
180 2pt7_A CAG-ALFA; ATPase, prote 97.4 4.6E-05 1.6E-09 70.4 2.3 48 150-199 177-224 (330)
181 1tq4_A IIGP1, interferon-induc 97.4 1.9E-05 6.5E-10 75.5 -0.3 73 150-235 75-147 (413)
182 1ye8_A Protein THEP1, hypothet 97.4 2E-05 7E-10 66.4 -0.2 47 149-200 5-51 (178)
183 2qm8_A GTPase/ATPase; G protei 97.4 1.1E-05 3.8E-10 74.8 -2.2 56 149-204 60-119 (337)
184 3ec2_A DNA replication protein 97.4 0.00032 1.1E-08 57.9 7.0 46 77-122 98-145 (180)
185 3aez_A Pantothenate kinase; tr 97.4 5.1E-05 1.7E-09 69.7 1.8 68 149-233 95-166 (312)
186 2ewv_A Twitching motility prot 97.4 3.8E-05 1.3E-09 72.1 1.0 58 149-210 141-204 (372)
187 4aby_A DNA repair protein RECN 97.3 4.6E-05 1.6E-09 71.4 1.3 53 149-201 65-156 (415)
188 3euj_A Chromosome partition pr 97.3 1.8E-05 6.3E-10 77.0 -1.6 55 147-201 32-94 (483)
189 1lw7_A Transcriptional regulat 97.3 6.6E-06 2.3E-10 76.6 -4.6 58 149-208 175-240 (365)
190 2qag_C Septin-7; cell cycle, c 97.3 4.3E-05 1.5E-09 73.1 0.5 58 62-123 119-180 (418)
191 1t9h_A YLOQ, probable GTPase E 97.2 3.6E-05 1.2E-09 70.7 -0.7 52 149-201 178-232 (307)
192 2eyu_A Twitching motility prot 97.2 7.3E-05 2.5E-09 66.8 0.6 47 149-199 30-77 (261)
193 1zp6_A Hypothetical protein AT 97.1 0.00034 1.2E-08 57.9 4.4 50 149-202 14-63 (191)
194 4e22_A Cytidylate kinase; P-lo 97.1 6E-05 2E-09 66.5 -0.5 52 149-200 32-95 (252)
195 1lvg_A Guanylate kinase, GMP k 97.0 3.9E-05 1.3E-09 65.3 -2.4 21 149-169 9-29 (198)
196 2v9p_A Replication protein E1; 97.0 0.00014 4.8E-09 66.8 1.2 39 149-208 131-169 (305)
197 2kjq_A DNAA-related protein; s 97.0 0.00092 3.1E-08 54.4 5.6 45 75-120 79-125 (149)
198 2jeo_A Uridine-cytidine kinase 97.0 4.9E-05 1.7E-09 66.5 -2.3 61 53-123 108-168 (245)
199 2ehv_A Hypothetical protein PH 96.9 0.00011 3.8E-09 63.1 -0.6 51 149-200 35-87 (251)
200 2jeo_A Uridine-cytidine kinase 96.9 0.00014 4.7E-09 63.6 -0.4 47 149-209 30-76 (245)
201 3asz_A Uridine kinase; cytidin 96.8 0.00033 1.1E-08 59.2 1.6 34 149-204 11-44 (211)
202 4eun_A Thermoresistant glucoki 96.7 0.00021 7.1E-09 60.3 -0.2 48 149-201 34-81 (200)
203 2x8a_A Nuclear valosin-contain 96.7 0.00018 6.1E-09 64.5 -0.9 50 149-200 49-98 (274)
204 2ewv_A Twitching motility prot 96.7 0.00062 2.1E-08 63.8 2.6 58 69-133 199-257 (372)
205 2obl_A ESCN; ATPase, hydrolase 96.7 0.0011 3.8E-08 61.6 4.2 51 150-200 77-134 (347)
206 3a00_A Guanylate kinase, GMP k 96.7 0.00039 1.3E-08 58.0 0.9 26 149-174 6-31 (186)
207 1ls1_A Signal recognition part 96.7 2.1E-05 7.3E-10 71.5 -7.5 89 91-184 21-138 (295)
208 4a74_A DNA repair and recombin 96.7 0.0012 4.1E-08 55.8 3.9 33 149-181 30-69 (231)
209 2qag_B Septin-6, protein NEDD5 96.6 0.00035 1.2E-08 67.0 0.4 46 149-202 47-92 (427)
210 1nij_A Hypothetical protein YJ 96.6 0.00036 1.2E-08 63.8 0.3 51 61-122 141-191 (318)
211 1rj9_A FTSY, signal recognitio 96.6 0.00032 1.1E-08 64.1 -0.2 55 62-121 203-259 (304)
212 1nij_A Hypothetical protein YJ 96.6 0.00044 1.5E-08 63.1 0.8 36 149-184 9-52 (318)
213 3lda_A DNA repair protein RAD5 96.6 0.0036 1.2E-07 59.4 7.0 59 78-136 272-364 (400)
214 2bdt_A BH3686; alpha-beta prot 96.6 4.3E-06 1.5E-10 69.8 -12.0 76 63-144 96-180 (189)
215 2gza_A Type IV secretion syste 96.5 0.00016 5.6E-09 67.4 -2.5 99 31-136 137-303 (361)
216 3c8u_A Fructokinase; YP_612366 96.5 0.00059 2E-08 57.9 1.1 34 149-182 27-63 (208)
217 2qnr_A Septin-2, protein NEDD5 96.5 0.00085 2.9E-08 60.9 2.1 49 148-200 22-71 (301)
218 1sq5_A Pantothenate kinase; P- 96.5 0.00075 2.6E-08 61.3 1.6 47 149-200 85-136 (308)
219 1p9r_A General secretion pathw 96.5 0.00063 2.1E-08 65.0 1.0 35 149-183 172-206 (418)
220 3szr_A Interferon-induced GTP- 96.5 0.0023 7.8E-08 63.7 5.0 66 77-142 144-231 (608)
221 2oap_1 GSPE-2, type II secreti 96.4 0.0014 4.7E-08 64.1 3.0 32 150-181 266-297 (511)
222 1oix_A RAS-related protein RAB 96.4 0.0023 8E-08 53.1 4.0 38 146-183 31-79 (191)
223 1sxj_E Activator 1 40 kDa subu 96.4 0.00078 2.7E-08 61.2 1.1 52 148-201 40-92 (354)
224 2zr9_A Protein RECA, recombina 96.4 0.0096 3.3E-07 55.2 8.4 76 67-142 125-237 (349)
225 1lw7_A Transcriptional regulat 96.4 0.00014 4.9E-09 67.4 -4.0 74 60-134 257-343 (365)
226 1e69_A Chromosome segregation 96.3 0.0011 3.9E-08 60.3 1.8 19 149-167 29-47 (322)
227 2dr3_A UPF0273 protein PH0284; 96.2 0.0095 3.3E-07 50.7 7.0 57 78-134 127-196 (247)
228 3lnc_A Guanylate kinase, GMP k 96.2 0.0019 6.6E-08 55.5 2.5 22 149-170 32-54 (231)
229 2j41_A Guanylate kinase; GMP, 96.1 0.0011 3.7E-08 55.3 0.6 50 149-202 11-61 (207)
230 2bdt_A BH3686; alpha-beta prot 96.1 0.0016 5.6E-08 53.9 1.6 44 149-201 7-50 (189)
231 2bbw_A Adenylate kinase 4, AK4 96.1 0.00031 1.1E-08 61.2 -3.0 49 55-110 146-199 (246)
232 2bbw_A Adenylate kinase 4, AK4 96.1 0.00046 1.6E-08 60.1 -2.1 34 148-181 31-67 (246)
233 1in4_A RUVB, holliday junction 96.0 0.00043 1.5E-08 63.4 -3.0 55 149-203 56-114 (334)
234 1odf_A YGR205W, hypothetical 3 95.9 0.00025 8.5E-09 64.4 -4.7 38 58-95 131-168 (290)
235 4gp7_A Metallophosphoesterase; 95.9 0.0014 4.8E-08 54.1 0.2 17 149-165 14-30 (171)
236 2r6a_A DNAB helicase, replicat 95.8 0.022 7.6E-07 54.2 8.4 75 61-137 295-401 (454)
237 2f9l_A RAB11B, member RAS onco 95.8 0.0051 1.7E-07 51.1 3.4 36 147-182 8-54 (199)
238 1cke_A CK, MSSA, protein (cyti 95.8 0.00051 1.8E-08 58.4 -3.0 54 148-201 9-74 (227)
239 1zp6_A Hypothetical protein AT 95.7 0.0011 3.7E-08 54.8 -1.2 55 56-118 104-158 (191)
240 3uie_A Adenylyl-sulfate kinase 95.6 0.0019 6.6E-08 54.3 -0.2 47 149-200 30-78 (200)
241 1udx_A The GTP-binding protein 95.5 0.0034 1.2E-07 59.9 1.3 58 56-117 247-305 (416)
242 2xau_A PRE-mRNA-splicing facto 95.5 0.0086 3E-07 61.2 4.1 72 56-127 185-260 (773)
243 1n0w_A DNA repair protein RAD5 95.4 0.0027 9.3E-08 54.1 0.1 33 149-181 29-68 (243)
244 1ixz_A ATP-dependent metallopr 95.3 0.00088 3E-08 58.3 -3.3 33 149-183 54-86 (254)
245 3jvv_A Twitching mobility prot 95.3 0.0037 1.3E-07 58.3 0.6 34 149-182 128-162 (356)
246 2w0m_A SSO2452; RECA, SSPF, un 95.2 0.0016 5.4E-08 54.9 -2.0 33 149-181 28-60 (235)
247 1iy2_A ATP-dependent metallopr 95.2 0.001 3.5E-08 58.9 -3.4 33 149-183 78-110 (278)
248 1rz3_A Hypothetical protein rb 95.2 0.0045 1.5E-07 52.2 0.9 38 149-186 27-64 (201)
249 2vp4_A Deoxynucleoside kinase; 95.2 0.0048 1.6E-07 53.2 0.9 49 149-201 25-83 (230)
250 3ney_A 55 kDa erythrocyte memb 95.0 0.0051 1.8E-07 52.8 0.7 39 149-189 24-75 (197)
251 1pzn_A RAD51, DNA repair and r 95.0 0.014 4.7E-07 54.0 3.5 34 149-182 136-176 (349)
252 2kjq_A DNAA-related protein; s 95.0 0.0055 1.9E-07 49.7 0.6 34 149-183 41-76 (149)
253 1ls1_A Signal recognition part 94.9 0.076 2.6E-06 47.8 8.1 55 63-117 164-219 (295)
254 3kta_A Chromosome segregation 94.8 0.0081 2.8E-07 49.2 1.4 26 149-174 31-56 (182)
255 1kgd_A CASK, peripheral plasma 94.8 0.0079 2.7E-07 49.8 1.2 28 149-176 10-38 (180)
256 1knq_A Gluconate kinase; ALFA/ 94.7 0.0072 2.5E-07 49.2 0.8 31 149-183 13-43 (175)
257 2qt1_A Nicotinamide riboside k 94.7 0.016 5.4E-07 48.6 2.9 21 149-169 26-46 (207)
258 1cr0_A DNA primase/helicase; R 94.7 0.009 3.1E-07 53.1 1.4 31 149-179 40-71 (296)
259 2f1r_A Molybdopterin-guanine d 94.6 0.00049 1.7E-08 57.7 -6.7 49 61-109 103-161 (171)
260 2qag_C Septin-7; cell cycle, c 94.4 0.0082 2.8E-07 57.2 0.4 49 148-200 35-83 (418)
261 1zu4_A FTSY; GTPase, signal re 94.4 0.014 4.8E-07 53.5 1.9 52 149-200 110-171 (320)
262 3nwj_A ATSK2; P loop, shikimat 94.3 0.011 3.7E-07 52.4 0.9 28 28-55 16-44 (250)
263 3cr8_A Sulfate adenylyltranfer 94.2 0.01 3.6E-07 58.5 0.6 33 150-182 375-409 (552)
264 1pui_A ENGB, probable GTP-bind 94.1 0.0072 2.5E-07 50.2 -0.6 29 149-177 31-64 (210)
265 1mky_A Probable GTP-binding pr 94.1 0.02 7E-07 54.2 2.4 37 147-183 183-231 (439)
266 3euj_A Chromosome partition pr 94.0 0.15 5.3E-06 49.4 8.6 73 56-133 374-464 (483)
267 3lda_A DNA repair protein RAD5 94.0 0.015 5.3E-07 55.0 1.5 34 149-182 183-223 (400)
268 3ec2_A DNA replication protein 94.0 0.012 4E-07 48.3 0.5 25 149-173 43-67 (180)
269 1ni3_A YCHF GTPase, YCHF GTP-b 94.0 0.029 1E-06 53.0 3.2 31 149-179 25-67 (392)
270 1s96_A Guanylate kinase, GMP k 94.0 0.047 1.6E-06 47.1 4.3 45 73-125 101-145 (219)
271 3m6a_A ATP-dependent protease 93.9 0.018 6.3E-07 56.3 1.8 52 149-200 113-164 (543)
272 2px0_A Flagellar biosynthesis 93.9 0.029 1E-06 50.7 3.0 69 67-139 172-246 (296)
273 4ad8_A DNA repair protein RECN 93.7 0.011 3.8E-07 57.3 -0.1 52 149-200 65-155 (517)
274 1kag_A SKI, shikimate kinase I 93.5 0.024 8.2E-07 45.7 1.6 22 149-170 9-30 (173)
275 3k1j_A LON protease, ATP-depen 93.5 0.034 1.2E-06 54.9 2.9 48 149-201 65-113 (604)
276 1vma_A Cell division protein F 93.4 0.019 6.5E-07 52.4 0.8 52 149-200 109-166 (306)
277 3tau_A Guanylate kinase, GMP k 93.4 0.03 1E-06 47.3 2.0 22 149-170 13-34 (208)
278 3tqc_A Pantothenate kinase; bi 93.3 0.029 9.9E-07 51.6 2.0 27 149-175 97-125 (321)
279 2ce7_A Cell division protein F 93.1 0.16 5.3E-06 49.2 6.8 60 64-123 93-167 (476)
280 1m7g_A Adenylylsulfate kinase; 92.9 0.026 8.8E-07 47.7 0.9 33 150-182 31-65 (211)
281 2www_A Methylmalonic aciduria 92.7 0.024 8.1E-07 52.4 0.5 33 149-181 79-111 (349)
282 1lvg_A Guanylate kinase, GMP k 92.7 0.0011 3.9E-08 56.0 -8.0 57 72-134 116-173 (198)
283 2qtf_A Protein HFLX, GTP-bindi 92.7 0.082 2.8E-06 49.2 4.1 36 148-183 183-229 (364)
284 2dy1_A Elongation factor G; tr 92.5 0.02 6.7E-07 57.6 -0.5 51 149-200 14-66 (665)
285 2qag_B Septin-6, protein NEDD5 92.5 0.072 2.5E-06 50.9 3.4 50 70-119 167-218 (427)
286 1vma_A Cell division protein F 92.5 0.3 1E-05 44.3 7.4 40 46-90 155-197 (306)
287 1ni3_A YCHF GTPase, YCHF GTP-b 92.3 0.00029 1E-08 66.8 -13.3 63 79-142 139-207 (392)
288 2e87_A Hypothetical protein PH 92.1 0.27 9.1E-06 45.1 6.8 63 58-121 228-293 (357)
289 2wjg_A FEOB, ferrous iron tran 92.0 0.11 3.9E-06 41.8 3.7 36 147-182 10-56 (188)
290 2pez_A Bifunctional 3'-phospho 92.0 0.036 1.2E-06 45.2 0.6 33 149-182 10-44 (179)
291 2gj8_A MNME, tRNA modification 91.8 0.15 5.1E-06 41.2 4.2 36 147-182 7-54 (172)
292 1w1w_A Structural maintenance 91.7 0.056 1.9E-06 50.9 1.7 24 149-172 31-54 (430)
293 1g5t_A COB(I)alamin adenosyltr 91.7 0.11 3.8E-06 44.5 3.4 70 67-136 106-181 (196)
294 2ius_A DNA translocase FTSK; n 91.6 0.013 4.3E-07 57.5 -3.1 59 62-121 269-343 (512)
295 2o8b_B DNA mismatch repair pro 91.2 0.047 1.6E-06 57.6 0.6 22 148-170 793-814 (1022)
296 2px0_A Flagellar biosynthesis 91.2 0.052 1.8E-06 49.0 0.8 33 150-182 111-144 (296)
297 2yvu_A Probable adenylyl-sulfa 91.1 0.06 2.1E-06 44.1 1.1 31 149-179 18-49 (186)
298 2dhr_A FTSH; AAA+ protein, hex 91.1 0.038 1.3E-06 53.8 -0.2 34 149-184 69-102 (499)
299 2wji_A Ferrous iron transport 90.7 0.23 7.9E-06 39.5 4.3 21 148-168 7-27 (165)
300 2cvh_A DNA repair and recombin 90.7 0.088 3E-06 43.8 1.8 31 149-181 25-55 (220)
301 1jjv_A Dephospho-COA kinase; P 90.4 0.11 3.8E-06 43.2 2.1 19 149-167 7-25 (206)
302 2o5v_A DNA replication and rep 90.0 0.12 4.2E-06 48.0 2.3 18 149-166 31-48 (359)
303 1f2t_A RAD50 ABC-ATPase; DNA d 90.0 0.12 4E-06 41.7 1.9 18 148-165 27-44 (149)
304 4dcu_A GTP-binding protein ENG 89.8 0.3 1E-05 46.3 4.8 116 65-183 88-246 (456)
305 3qf7_A RAD50; ABC-ATPase, ATPa 89.7 0.1 3.4E-06 48.4 1.4 17 149-165 28-44 (365)
306 1udx_A The GTP-binding protein 89.6 0.15 5E-06 48.5 2.4 31 149-179 162-203 (416)
307 1oix_A RAS-related protein RAB 89.5 0.16 5.6E-06 41.7 2.4 39 67-107 151-189 (191)
308 2if2_A Dephospho-COA kinase; a 89.4 0.11 3.9E-06 43.0 1.4 19 149-167 6-24 (204)
309 3t61_A Gluconokinase; PSI-biol 89.1 0.14 4.7E-06 42.5 1.7 27 149-179 23-49 (202)
310 4a1f_A DNAB helicase, replicat 88.7 0.89 3E-05 41.9 7.0 54 60-118 108-164 (338)
311 1ewq_A DNA mismatch repair pro 88.6 0.082 2.8E-06 54.1 -0.1 27 149-175 581-608 (765)
312 1qhx_A CPT, protein (chloramph 88.5 0.18 6E-06 40.6 1.9 20 149-168 8-27 (178)
313 1np6_A Molybdopterin-guanine d 88.4 0.17 5.7E-06 42.2 1.7 33 149-181 11-46 (174)
314 3kb2_A SPBC2 prophage-derived 88.0 0.2 6.8E-06 39.8 1.9 19 149-167 6-24 (173)
315 2p67_A LAO/AO transport system 87.9 0.12 4E-06 47.4 0.5 32 150-181 62-93 (341)
316 2ohf_A Protein OLA1, GTP-bindi 87.7 0.29 1E-05 46.2 3.1 32 148-179 26-68 (396)
317 3lw7_A Adenylate kinase relate 87.7 0.21 7.3E-06 39.3 1.9 16 149-164 6-21 (179)
318 2zej_A Dardarin, leucine-rich 87.3 0.25 8.6E-06 40.0 2.2 21 148-168 6-26 (184)
319 3vaa_A Shikimate kinase, SK; s 87.3 0.21 7.1E-06 41.5 1.6 20 149-168 30-49 (199)
320 2p5t_B PEZT; postsegregational 87.3 0.17 5.8E-06 44.0 1.1 32 149-182 37-68 (253)
321 3qkt_A DNA double-strand break 87.2 0.22 7.5E-06 45.3 1.9 16 149-164 28-43 (339)
322 2qor_A Guanylate kinase; phosp 86.9 0.24 8.3E-06 41.3 1.9 20 150-169 18-37 (204)
323 1ly1_A Polynucleotide kinase; 86.9 0.25 8.6E-06 39.5 1.9 18 149-166 7-24 (181)
324 1gtv_A TMK, thymidylate kinase 86.6 0.12 4.2E-06 42.9 -0.2 22 150-171 6-27 (214)
325 2dr3_A UPF0273 protein PH0284; 86.5 0.054 1.9E-06 45.9 -2.5 32 149-180 28-60 (247)
326 3qks_A DNA double-strand break 86.4 0.27 9.2E-06 41.5 1.9 17 149-165 28-44 (203)
327 2qag_A Septin-2, protein NEDD5 86.3 0.3 1E-05 45.0 2.3 22 148-169 41-62 (361)
328 1m2o_B GTP-binding protein SAR 86.3 0.53 1.8E-05 38.4 3.6 35 149-183 28-70 (190)
329 1lv7_A FTSH; alpha/beta domain 86.1 0.32 1.1E-05 41.8 2.3 32 149-182 50-81 (257)
330 1f6b_A SAR1; gtpases, N-termin 86.0 0.54 1.8E-05 38.7 3.6 34 149-182 30-71 (198)
331 3lxx_A GTPase IMAP family memb 85.8 0.43 1.5E-05 40.6 2.9 26 146-171 31-56 (239)
332 1via_A Shikimate kinase; struc 85.7 0.31 1.1E-05 39.3 1.9 20 149-168 9-28 (175)
333 1nlf_A Regulatory protein REPA 85.3 0.27 9.3E-06 43.1 1.4 21 149-169 35-55 (279)
334 4eaq_A DTMP kinase, thymidylat 85.2 0.32 1.1E-05 41.9 1.8 28 149-177 31-58 (229)
335 1kht_A Adenylate kinase; phosp 85.2 0.34 1.2E-05 39.1 1.9 19 149-167 8-26 (192)
336 3cm0_A Adenylate kinase; ATP-b 85.1 0.35 1.2E-05 39.2 1.9 18 149-166 9-26 (186)
337 2jaq_A Deoxyguanosine kinase; 85.0 0.35 1.2E-05 39.4 1.9 19 149-167 5-23 (205)
338 2ffh_A Protein (FFH); SRP54, s 84.6 0.25 8.6E-06 47.1 0.9 35 150-184 104-138 (425)
339 2ze6_A Isopentenyl transferase 84.6 0.34 1.1E-05 42.3 1.7 20 149-168 6-25 (253)
340 1odf_A YGR205W, hypothetical 3 84.4 0.23 8E-06 44.6 0.6 44 149-208 36-79 (290)
341 2rhm_A Putative kinase; P-loop 84.3 0.36 1.2E-05 39.2 1.6 18 149-166 10-27 (193)
342 1j8m_F SRP54, signal recogniti 84.2 0.24 8.1E-06 44.7 0.5 35 150-184 104-138 (297)
343 3ihw_A Centg3; RAS, centaurin, 84.2 0.8 2.7E-05 37.1 3.7 37 146-182 22-67 (184)
344 1nks_A Adenylate kinase; therm 84.1 0.36 1.2E-05 38.9 1.6 20 149-168 6-25 (194)
345 1wb9_A DNA mismatch repair pro 84.1 0.31 1.1E-05 50.0 1.4 20 149-168 612-631 (800)
346 3t34_A Dynamin-related protein 84.1 0.35 1.2E-05 44.2 1.6 27 149-175 39-67 (360)
347 3cbq_A GTP-binding protein REM 83.8 0.74 2.5E-05 37.8 3.4 37 146-182 25-72 (195)
348 3trf_A Shikimate kinase, SK; a 83.5 0.45 1.6E-05 38.5 1.9 18 149-166 10-27 (185)
349 4ag6_A VIRB4 ATPase, type IV s 83.1 0.39 1.3E-05 44.3 1.6 28 150-177 41-68 (392)
350 2z4s_A Chromosomal replication 83.0 1.8 6.1E-05 40.9 6.1 62 79-140 194-260 (440)
351 2f9l_A RAB11B, member RAS onco 83.0 0.58 2E-05 38.3 2.4 36 70-107 130-165 (199)
352 1ypw_A Transitional endoplasmi 82.8 0.13 4.3E-06 52.8 -2.1 33 149-183 243-275 (806)
353 2w58_A DNAI, primosome compone 82.8 0.44 1.5E-05 39.2 1.6 22 150-171 60-81 (202)
354 3iij_A Coilin-interacting nucl 82.7 0.51 1.7E-05 38.1 1.9 17 149-165 16-32 (180)
355 3thx_A DNA mismatch repair pro 82.2 0.74 2.5E-05 48.1 3.3 24 149-172 667-698 (934)
356 1tev_A UMP-CMP kinase; ploop, 82.2 0.54 1.9E-05 37.9 1.9 18 149-166 8-25 (196)
357 2plr_A DTMP kinase, probable t 81.9 0.56 1.9E-05 38.5 1.9 21 149-169 9-29 (213)
358 1uf9_A TT1252 protein; P-loop, 81.9 0.41 1.4E-05 39.2 1.0 27 148-179 12-38 (203)
359 1svm_A Large T antigen; AAA+ f 81.9 0.49 1.7E-05 44.3 1.7 26 149-177 174-199 (377)
360 4fcw_A Chaperone protein CLPB; 81.9 0.45 1.6E-05 41.7 1.4 32 148-179 51-83 (311)
361 2z0h_A DTMP kinase, thymidylat 81.8 0.57 2E-05 38.0 1.9 19 150-168 6-24 (197)
362 1u94_A RECA protein, recombina 81.5 6.3 0.00022 36.2 9.1 75 67-141 127-238 (356)
363 4dsu_A GTPase KRAS, isoform 2B 81.4 0.68 2.3E-05 36.8 2.2 22 146-167 6-27 (189)
364 3hr8_A Protein RECA; alpha and 81.4 0.69 2.3E-05 43.0 2.5 34 149-182 66-100 (356)
365 1e6c_A Shikimate kinase; phosp 81.3 0.62 2.1E-05 37.1 1.9 18 149-166 7-24 (173)
366 2pbr_A DTMP kinase, thymidylat 81.3 0.61 2.1E-05 37.6 1.9 19 149-167 5-23 (195)
367 1gvn_B Zeta; postsegregational 81.1 0.56 1.9E-05 41.8 1.7 29 149-179 38-66 (287)
368 2vli_A Antibiotic resistance p 81.1 0.48 1.6E-05 38.1 1.2 18 149-166 10-27 (183)
369 2bme_A RAB4A, RAS-related prot 80.9 0.6 2.1E-05 37.2 1.7 22 146-167 12-33 (186)
370 1ex7_A Guanylate kinase; subst 80.8 0.64 2.2E-05 39.1 1.9 19 149-167 6-24 (186)
371 1vht_A Dephospho-COA kinase; s 80.8 0.59 2E-05 39.1 1.6 18 149-166 9-26 (218)
372 2pt5_A Shikimate kinase, SK; a 80.7 0.67 2.3E-05 36.8 1.9 18 149-166 5-22 (168)
373 3auy_A DNA double-strand break 80.7 0.55 1.9E-05 43.2 1.6 17 149-165 30-46 (371)
374 1ega_A Protein (GTP-binding pr 80.5 0.66 2.2E-05 41.5 2.0 21 148-168 12-32 (301)
375 3iby_A Ferrous iron transport 80.5 1.1 3.8E-05 39.1 3.4 34 149-182 6-50 (256)
376 3b9p_A CG5977-PA, isoform A; A 80.5 3.6 0.00012 35.7 6.8 60 63-122 97-171 (297)
377 2iyv_A Shikimate kinase, SK; t 80.2 0.71 2.4E-05 37.3 1.9 18 149-166 7-24 (184)
378 1y63_A LMAJ004144AAA protein; 80.1 0.71 2.4E-05 37.7 1.9 19 149-167 15-33 (184)
379 3k53_A Ferrous iron transport 80.1 0.63 2.2E-05 40.6 1.7 21 148-168 7-27 (271)
380 3kl4_A SRP54, signal recogniti 80.1 0.51 1.7E-05 45.0 1.1 28 150-177 103-130 (433)
381 3r20_A Cytidylate kinase; stru 79.9 0.56 1.9E-05 40.9 1.3 28 148-175 13-43 (233)
382 1xjc_A MOBB protein homolog; s 79.8 0.54 1.9E-05 39.0 1.1 21 149-169 9-29 (169)
383 3fb4_A Adenylate kinase; psych 79.8 0.73 2.5E-05 38.3 1.9 18 149-166 5-22 (216)
384 2c95_A Adenylate kinase 1; tra 79.7 0.66 2.3E-05 37.6 1.6 18 149-166 14-31 (196)
385 1z2a_A RAS-related protein RAB 79.6 0.7 2.4E-05 35.9 1.7 21 147-167 8-28 (168)
386 2v54_A DTMP kinase, thymidylat 79.5 0.75 2.6E-05 37.6 1.9 20 149-168 9-28 (204)
387 2ged_A SR-beta, signal recogni 79.5 0.69 2.4E-05 37.2 1.7 21 148-168 52-72 (193)
388 3cf0_A Transitional endoplasmi 79.4 0.84 2.9E-05 40.5 2.3 31 149-181 54-84 (301)
389 2ce2_X GTPase HRAS; signaling 79.4 0.65 2.2E-05 35.7 1.4 20 148-167 7-26 (166)
390 2wwf_A Thymidilate kinase, put 79.3 0.69 2.4E-05 38.1 1.6 18 149-166 15-32 (212)
391 3q72_A GTP-binding protein RAD 79.3 0.73 2.5E-05 35.9 1.7 21 148-168 6-26 (166)
392 2erx_A GTP-binding protein DI- 79.3 0.82 2.8E-05 35.5 2.0 20 148-167 7-26 (172)
393 3ake_A Cytidylate kinase; CMP 79.3 0.71 2.4E-05 37.8 1.7 19 149-167 7-25 (208)
394 2dyk_A GTP-binding protein; GT 79.3 0.73 2.5E-05 35.6 1.7 20 149-168 6-25 (161)
395 2qm8_A GTPase/ATPase; G protei 79.2 0.82 2.8E-05 41.7 2.2 46 60-109 209-260 (337)
396 2bwj_A Adenylate kinase 5; pho 79.1 0.71 2.4E-05 37.5 1.6 19 149-167 17-35 (199)
397 2nzj_A GTP-binding protein REM 79.1 0.83 2.8E-05 35.8 2.0 22 147-168 7-28 (175)
398 1u8z_A RAS-related protein RAL 79.1 0.75 2.6E-05 35.5 1.7 20 148-167 8-27 (168)
399 1jal_A YCHF protein; nucleotid 78.9 0.99 3.4E-05 42.0 2.7 31 149-179 7-48 (363)
400 3tw8_B RAS-related protein RAB 78.7 0.86 2.9E-05 35.8 1.9 21 147-167 12-32 (181)
401 1zuh_A Shikimate kinase; alpha 78.7 0.85 2.9E-05 36.3 1.9 18 149-166 12-29 (168)
402 3dl0_A Adenylate kinase; phosp 78.6 0.83 2.9E-05 38.0 1.9 18 149-166 5-22 (216)
403 1qf9_A UMP/CMP kinase, protein 78.6 0.77 2.6E-05 36.9 1.6 18 149-166 11-28 (194)
404 3bh0_A DNAB-like replicative h 78.5 2.4 8.1E-05 38.1 5.1 53 62-119 134-190 (315)
405 2g6b_A RAS-related protein RAB 78.1 1 3.5E-05 35.5 2.2 23 146-168 12-34 (180)
406 3q85_A GTP-binding protein REM 78.0 0.95 3.3E-05 35.3 2.0 20 148-167 6-25 (169)
407 1ukz_A Uridylate kinase; trans 78.0 0.89 3.1E-05 37.3 1.9 18 149-166 20-37 (203)
408 1z0j_A RAB-22, RAS-related pro 78.0 0.84 2.9E-05 35.5 1.7 22 147-168 9-30 (170)
409 3a4m_A L-seryl-tRNA(SEC) kinas 78.0 0.87 3E-05 39.6 1.9 19 149-167 9-27 (260)
410 1ek0_A Protein (GTP-binding pr 78.0 0.85 2.9E-05 35.4 1.7 21 148-168 7-27 (170)
411 3pqc_A Probable GTP-binding pr 77.9 0.83 2.8E-05 36.5 1.6 21 148-168 27-47 (195)
412 1sxj_C Activator 1 40 kDa subu 77.9 0.61 2.1E-05 42.0 0.9 25 149-173 51-75 (340)
413 1nn5_A Similar to deoxythymidy 77.7 0.83 2.8E-05 37.6 1.6 18 149-166 14-31 (215)
414 1svi_A GTP-binding protein YSX 77.7 0.84 2.9E-05 36.7 1.6 21 148-168 27-47 (195)
415 1c1y_A RAS-related protein RAP 77.7 0.87 3E-05 35.3 1.7 20 148-167 7-26 (167)
416 2z43_A DNA repair and recombin 77.7 2.4 8.3E-05 38.1 4.9 54 67-120 188-258 (324)
417 3thx_B DNA mismatch repair pro 77.7 0.51 1.7E-05 49.2 0.4 19 149-167 678-696 (918)
418 3bos_A Putative DNA replicatio 77.5 0.7 2.4E-05 38.3 1.1 20 150-169 58-77 (242)
419 1kao_A RAP2A; GTP-binding prot 77.5 0.89 3E-05 35.1 1.7 20 148-167 7-26 (167)
420 1zak_A Adenylate kinase; ATP:A 77.4 0.85 2.9E-05 38.2 1.6 18 149-166 10-27 (222)
421 2cdn_A Adenylate kinase; phosp 77.4 0.94 3.2E-05 37.3 1.9 18 149-166 25-42 (201)
422 1ky3_A GTP-binding protein YPT 77.2 0.91 3.1E-05 35.7 1.7 21 147-167 11-31 (182)
423 2lkc_A Translation initiation 77.1 1 3.6E-05 35.4 2.0 36 148-183 12-58 (178)
424 1aky_A Adenylate kinase; ATP:A 77.1 0.97 3.3E-05 37.8 1.9 19 149-167 9-27 (220)
425 1zd8_A GTP:AMP phosphotransfer 77.0 0.88 3E-05 38.4 1.6 18 149-166 12-29 (227)
426 1z08_A RAS-related protein RAB 77.0 0.93 3.2E-05 35.3 1.7 21 147-167 9-29 (170)
427 3t5d_A Septin-7; GTP-binding p 76.9 1 3.5E-05 39.3 2.1 22 147-168 11-32 (274)
428 2fn4_A P23, RAS-related protei 76.9 0.83 2.9E-05 35.9 1.4 21 147-167 12-32 (181)
429 1g16_A RAS-related protein SEC 76.6 0.87 3E-05 35.4 1.4 22 147-168 6-27 (170)
430 2cxx_A Probable GTP-binding pr 76.6 0.96 3.3E-05 36.0 1.7 20 149-168 6-25 (190)
431 1jbk_A CLPB protein; beta barr 76.4 1.1 3.6E-05 35.4 1.9 20 149-168 48-67 (195)
432 1fzq_A ADP-ribosylation factor 76.4 0.98 3.3E-05 36.4 1.7 22 147-168 19-40 (181)
433 1wms_A RAB-9, RAB9, RAS-relate 76.3 0.99 3.4E-05 35.5 1.7 21 147-167 10-30 (177)
434 1r2q_A RAS-related protein RAB 76.3 1 3.5E-05 34.9 1.7 20 147-166 9-28 (170)
435 1q3t_A Cytidylate kinase; nucl 76.1 1 3.4E-05 38.4 1.7 18 149-166 21-38 (236)
436 1l8q_A Chromosomal replication 76.0 0.8 2.7E-05 40.8 1.1 21 149-169 42-62 (324)
437 3clv_A RAB5 protein, putative; 75.8 1 3.5E-05 35.9 1.7 21 147-167 10-30 (208)
438 3lxw_A GTPase IMAP family memb 75.6 1.3 4.6E-05 38.1 2.4 23 146-168 23-45 (247)
439 1z0f_A RAB14, member RAS oncog 75.5 1.1 3.7E-05 35.1 1.7 23 146-168 17-39 (179)
440 2xb4_A Adenylate kinase; ATP-b 75.4 1.1 3.9E-05 37.8 1.9 18 149-166 5-22 (223)
441 3con_A GTPase NRAS; structural 75.4 1.1 3.7E-05 36.0 1.7 21 147-167 24-44 (190)
442 1ltq_A Polynucleotide kinase; 75.4 1.1 3.8E-05 39.2 1.9 18 149-166 7-24 (301)
443 3b9p_A CG5977-PA, isoform A; A 75.4 1 3.6E-05 39.3 1.7 20 149-168 59-78 (297)
444 1fnn_A CDC6P, cell division co 75.3 1.7 5.7E-05 39.0 3.1 43 78-121 124-170 (389)
445 2hxs_A RAB-26, RAS-related pro 75.3 1.2 4.2E-05 35.0 1.9 21 147-167 9-29 (178)
446 1upt_A ARL1, ADP-ribosylation 75.1 1.1 3.9E-05 34.8 1.7 20 147-166 10-29 (171)
447 3t1o_A Gliding protein MGLA; G 75.0 1.3 4.3E-05 35.4 2.0 23 147-169 17-39 (198)
448 1jcn_A Inosine monophosphate d 75.0 0.02 6.9E-07 55.6 -10.5 60 74-139 28-92 (514)
449 1e4v_A Adenylate kinase; trans 75.0 1.1 3.7E-05 37.4 1.6 18 149-166 5-22 (214)
450 3bc1_A RAS-related protein RAB 74.8 1.1 3.9E-05 35.4 1.7 22 146-167 13-34 (195)
451 1moz_A ARL1, ADP-ribosylation 74.5 0.93 3.2E-05 35.9 1.0 20 147-166 21-40 (183)
452 1r8s_A ADP-ribosylation factor 74.4 1.2 4.1E-05 34.5 1.7 18 149-166 5-22 (164)
453 2oil_A CATX-8, RAS-related pro 74.2 1.2 4.1E-05 35.8 1.7 22 146-167 27-48 (193)
454 1fnn_A CDC6P, cell division co 74.1 1.5 5.1E-05 39.4 2.4 31 149-179 49-81 (389)
455 2a9k_A RAS-related protein RAL 74.0 1.2 4.2E-05 35.1 1.7 22 146-167 20-41 (187)
456 3b1v_A Ferrous iron uptake tra 73.9 1.3 4.5E-05 39.1 2.0 21 148-168 7-27 (272)
457 1ksh_A ARF-like protein 2; sma 73.9 1.4 4.9E-05 35.1 2.0 22 147-168 21-42 (186)
458 2cjw_A GTP-binding protein GEM 73.8 1.5 5.2E-05 35.7 2.2 21 146-166 8-28 (192)
459 2qby_A CDC6 homolog 1, cell di 73.7 1 3.5E-05 40.1 1.2 31 149-179 50-84 (386)
460 2rcn_A Probable GTPase ENGC; Y 73.3 2.9 0.0001 38.7 4.3 50 44-109 297-346 (358)
461 2y8e_A RAB-protein 6, GH09086P 73.2 1.2 4.1E-05 34.9 1.4 21 147-167 17-37 (179)
462 2r62_A Cell division protease 73.1 1.3 4.5E-05 38.0 1.7 20 148-167 48-67 (268)
463 2efe_B Small GTP-binding prote 73.0 1.3 4.6E-05 34.8 1.7 22 146-167 14-35 (181)
464 1nrj_B SR-beta, signal recogni 72.9 1.3 4.6E-05 36.4 1.7 22 147-168 15-36 (218)
465 2bov_A RAla, RAS-related prote 72.8 1.4 4.7E-05 35.7 1.7 21 147-167 17-37 (206)
466 2il1_A RAB12; G-protein, GDP, 72.6 1.5 5.3E-05 35.4 2.0 22 147-168 29-50 (192)
467 1uj2_A Uridine-cytidine kinase 72.5 1.5 5.1E-05 37.7 1.9 19 148-166 26-44 (252)
468 2ius_A DNA translocase FTSK; n 72.4 1.2 4.3E-05 43.3 1.5 36 148-183 171-208 (512)
469 3e70_C DPA, signal recognition 72.4 4.1 0.00014 37.1 5.0 66 66-138 230-307 (328)
470 1vg8_A RAS-related protein RAB 72.2 1.4 4.9E-05 35.7 1.7 22 147-168 11-32 (207)
471 1njg_A DNA polymerase III subu 72.1 1.6 5.3E-05 35.6 1.9 15 151-165 52-66 (250)
472 3n70_A Transport activator; si 72.0 1.5 5.1E-05 34.4 1.7 31 149-179 29-59 (145)
473 3be4_A Adenylate kinase; malar 71.9 1.4 4.8E-05 36.9 1.6 18 149-166 10-27 (217)
474 3h4m_A Proteasome-activating n 71.8 1.4 4.9E-05 38.0 1.7 21 149-169 56-76 (285)
475 1zbd_A Rabphilin-3A; G protein 71.8 1.7 5.7E-05 35.3 2.0 22 147-168 11-32 (203)
476 3tlx_A Adenylate kinase 2; str 71.7 1.6 5.3E-05 37.6 1.9 17 150-166 35-51 (243)
477 1mh1_A RAC1; GTP-binding, GTPa 71.7 1.5 5.2E-05 34.6 1.7 20 147-166 8-27 (186)
478 2qtf_A Protein HFLX, GTP-bindi 71.7 1.2 3.9E-05 41.3 1.1 61 44-108 283-352 (364)
479 1ak2_A Adenylate kinase isoenz 71.7 1.6 5.4E-05 37.0 1.9 19 149-167 21-39 (233)
480 3kkq_A RAS-related protein M-R 71.5 1.5 5.2E-05 34.7 1.7 22 146-167 20-41 (183)
481 2grj_A Dephospho-COA kinase; T 71.5 1.6 5.6E-05 36.5 1.9 19 149-167 17-35 (192)
482 3c8u_A Fructokinase; YP_612366 71.4 0.02 6.9E-07 48.3 -10.1 29 61-89 111-140 (208)
483 2h57_A ADP-ribosylation factor 71.4 1.4 4.7E-05 35.5 1.4 21 148-168 25-45 (190)
484 4bas_A ADP-ribosylation factor 71.3 1.7 5.9E-05 34.8 2.0 22 147-168 20-41 (199)
485 3tkl_A RAS-related protein RAB 71.3 1.6 5.3E-05 35.0 1.7 22 146-167 18-39 (196)
486 2gf9_A RAS-related protein RAB 71.2 1.6 5.4E-05 35.1 1.7 22 147-168 25-46 (189)
487 2gf0_A GTP-binding protein DI- 71.1 1.4 4.8E-05 35.4 1.4 20 147-166 11-30 (199)
488 2p65_A Hypothetical protein PF 71.0 1.3 4.5E-05 34.9 1.1 20 149-168 48-67 (187)
489 1z06_A RAS-related protein RAB 70.8 1.6 5.5E-05 35.0 1.7 22 146-167 22-43 (189)
490 3ice_A Transcription terminati 70.7 0.36 1.2E-05 45.9 -2.6 35 243-277 130-178 (422)
491 3v9p_A DTMP kinase, thymidylat 70.5 1.9 6.5E-05 37.2 2.2 20 150-169 31-50 (227)
492 2qu8_A Putative nucleolar GTP- 70.5 1.9 6.4E-05 36.1 2.0 21 147-167 32-52 (228)
493 2e87_A Hypothetical protein PH 70.4 1.7 5.9E-05 39.5 2.0 21 148-168 171-191 (357)
494 2a5j_A RAS-related protein RAB 70.3 2 6.8E-05 34.6 2.1 21 147-167 24-44 (191)
495 1m7b_A RND3/RHOE small GTP-bin 70.3 1.5 5.2E-05 35.1 1.4 21 147-167 10-30 (184)
496 1zj6_A ADP-ribosylation factor 70.2 1.7 5.9E-05 34.8 1.7 20 148-167 20-39 (187)
497 2f7s_A C25KG, RAS-related prot 70.1 2.3 8E-05 34.8 2.6 22 147-168 28-49 (217)
498 2h17_A ADP-ribosylation factor 70.0 1.6 5.3E-05 34.9 1.4 20 148-167 25-44 (181)
499 2wsm_A Hydrogenase expression/ 70.0 1.5 5.2E-05 36.2 1.4 18 150-167 36-53 (221)
500 2fg5_A RAB-22B, RAS-related pr 70.0 1.5 5.2E-05 35.4 1.4 23 146-168 25-47 (192)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=100.00 E-value=8e-34 Score=304.94 Aligned_cols=140 Identities=44% Similarity=0.682 Sum_probs=123.9
Q ss_pred ccHHHhhcccccccCCCCC-ccccccCceEEEeeeeeeeCc--hHHhhcccCcccccCCeeec-----------------
Q psy18009 2 ENMFDLLQETCDVIDIPQA-PMLCVAQGAVEFRNVSFSYTP--ERAILKNISFTVPAGKTLAL----------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~nvsf~Y~~--~~~vL~~l~l~i~~~~~v~~----------------- 61 (277)
+|+++++++++++++.+.. ....+..|.|+|+||+|+|+. +..+|++++|++.+|+.++.
T Consensus 387 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~ 466 (1321)
T 4f4c_A 387 SGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLR 466 (1321)
T ss_dssp HHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTT
T ss_pred HHHHHHHcCCccccccccccccCCCCCCcEEEEEeeeeCCCCCCCceeeceEEeecCCcEEEEEecCCCcHHHHHHHhcc
Confidence 6899999998886654332 233445788999999999974 45799999999999998864
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 467 ~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T 546 (1321)
T 4f4c_A 467 YYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNT 546 (1321)
T ss_dssp SSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSS
T ss_pred ccccccCcccCCCccchhccHHHHhhcccccCCcceeeCCchhHHHhhhcccchHHHHHHHHHHccchhHHHcCCCCCcc
Confidence
Q ss_pred --------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEee
Q psy18009 62 --------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMH 133 (277)
Q Consensus 62 --------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~ 133 (277)
||||||||++||||++++|+|||||||||+||+++...+.+.|+++.+++|+|+||||++.+..||+|+||+
T Consensus 547 ~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~ 626 (1321)
T 4f4c_A 547 LVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCK 626 (1321)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEE
T ss_pred EecCCCCCCCHHHHHHHHHHHHHccCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCEEEEEcccHHHHHhCCEEEEee
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEec
Q psy18009 134 AGEIVERG 141 (277)
Q Consensus 134 dG~iv~~g 141 (277)
+|++++.|
T Consensus 627 ~G~ive~G 634 (1321)
T 4f4c_A 627 NGQVVEVG 634 (1321)
T ss_dssp TTEEEEEE
T ss_pred CCeeeccC
Confidence 99998443
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=100.00 E-value=2.3e-33 Score=300.75 Aligned_cols=138 Identities=46% Similarity=0.689 Sum_probs=119.8
Q ss_pred ccHHHhhcccccccCCC-CCccccccCceEEEeeeeeeeCch--HHhhcccCcccccCCeeec-----------------
Q psy18009 2 ENMFDLLQETCDVIDIP-QAPMLCVAQGAVEFRNVSFSYTPE--RAILKNISFTVPAGKTLAL----------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~nvsf~Y~~~--~~vL~~l~l~i~~~~~v~~----------------- 61 (277)
+|+++++++++++++.+ .........|.|+|+||+|+|+.. ..+|++++|++.+|+.++.
T Consensus 359 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g 438 (1284)
T 3g5u_A 359 YEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQR 438 (1284)
T ss_dssp HHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTT
T ss_pred HHHHHHHcCCCcCCcccccCCCCCCCCCeEEEEEEEEEcCCCCCCcceecceEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 57889999887765422 122223346889999999999743 4699999999999998764
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 439 ~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 518 (1284)
T 3g5u_A 439 LYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDT 518 (1284)
T ss_dssp SSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGC
T ss_pred CCCCCCeEEEECCEEHHhCCHHHHHhheEEEcCCCccCCccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccc
Confidence
Q ss_pred --------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEee
Q psy18009 62 --------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMH 133 (277)
Q Consensus 62 --------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~ 133 (277)
|||||||||+|||||+++|+|||||||||+||+++.+.+.+.++.+.+++|+|+||||++++..||||+||+
T Consensus 519 ~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~ 598 (1284)
T 3g5u_A 519 LVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFD 598 (1284)
T ss_dssp CCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTTCSEEEECS
T ss_pred cccCCCCccCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEE
Confidence 999999999999999999999999999999999999999999999888889999999999998899999999
Q ss_pred CcEEEE
Q psy18009 134 AGEIVE 139 (277)
Q Consensus 134 dG~iv~ 139 (277)
+|++++
T Consensus 599 ~G~i~~ 604 (1284)
T 3g5u_A 599 GGVIVE 604 (1284)
T ss_dssp SSCCCC
T ss_pred CCEEEE
Confidence 998863
No 3
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=99.97 E-value=9.8e-31 Score=242.16 Aligned_cols=147 Identities=64% Similarity=0.917 Sum_probs=129.4
Q ss_pred CccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCchHHhhcccCcccccCCeeec-------------------
Q psy18009 1 MENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLAL------------------- 61 (277)
Q Consensus 1 ~~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~~~~vL~~l~l~i~~~~~v~~------------------- 61 (277)
++|++++++++++..+.+...+.+...+.|+|+||+|+|+....+|++++|++.+|+.++.
T Consensus 25 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~vs~~y~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~ 104 (306)
T 3nh6_A 25 MENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFY 104 (306)
T ss_dssp HHHHHHHHHHHHSCCCCTTCBCCCCSSCCEEEEEEEEESSTTCEEEEEEEEEECTTCEEEEESSSCHHHHHHHHHHTTSS
T ss_pred HHHHHHHHhCCccccccccccccCCCCCeEEEEEEEEEcCCCCceeeeeeEEEcCCCEEEEECCCCchHHHHHHHHHcCC
Confidence 4689999998877654443333344567899999999997666799999999999998864
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 105 ~p~~G~I~i~G~~i~~~~~~~~r~~i~~v~Q~~~lf~~Tv~eNi~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~ 184 (306)
T 3nh6_A 105 DISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQV 184 (306)
T ss_dssp CCSEEEEEETTEETTSBCHHHHHHTEEEECSSCCCCSEEHHHHHHTTSTTCCHHHHHHHHHHHTCHHHHHHSTTGGGCEE
T ss_pred CCCCcEEEECCEEcccCCHHHHhcceEEEecCCccCcccHHHHHHhhcccCCHHHHHHHHHHhCcHHHHHhccchhhhHh
Confidence
Q ss_pred ------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 62 ------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 62 ------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
|||||||||+|||||+.+|+|||||||||+||+.+...+++.|+++.+++|+|+|||+++.+..||||++|++|
T Consensus 185 ~~~g~~LSGGqrQRvaiARAL~~~p~iLlLDEPts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~~aD~i~vl~~G 264 (306)
T 3nh6_A 185 GERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDG 264 (306)
T ss_dssp STTSBCCCHHHHHHHHHHHHHHHCCSEEEEECCSSCCCHHHHHHHHHHHHHHHTTSEEEEECCSHHHHHTCSEEEEEETT
T ss_pred cCCcCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEEcChHHHHcCCEEEEEECC
Confidence 89999999999999999999999999999999999999999999998888999999999999889999999999
Q ss_pred EEEEecCceeee
Q psy18009 136 EIVERGSLFVSL 147 (277)
Q Consensus 136 ~iv~~g~~~~~~ 147 (277)
++++.|++....
T Consensus 265 ~iv~~G~~~el~ 276 (306)
T 3nh6_A 265 CIVERGRHEALL 276 (306)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEECCHHHHH
Confidence 999999876543
No 4
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=99.96 E-value=2.9e-30 Score=255.08 Aligned_cols=180 Identities=24% Similarity=0.342 Sum_probs=139.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++....++++..|||||||||+|||||+.+|++|||||||++||+.+++.++++|+++++ ++|+|+|||+++
T Consensus 140 ~~~l~~lgl~~~~~~~~~~LSgGekQRv~iAraL~~~P~lLlLDEPTs~LD~~~~~~l~~~L~~l~~~g~tvi~vsHd~~ 219 (538)
T 1yqt_A 140 EEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLA 219 (538)
T ss_dssp HHHHHHTTCTTTTTSBGGGCCHHHHHHHHHHHHHHSCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHHcCCChhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 5689999999889999999999999999999999999999999999999999999999999999865 568889999999
Q ss_pred hhcc-CceEEEeeCcE-----EEE---------------------------------------ecCceee----------
Q psy18009 122 TIIH-ADEILVMHAGE-----IVE---------------------------------------RGSLFVS---------- 146 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~-----iv~---------------------------------------~g~~~~~---------- 146 (277)
++.. ||||++|++|. ... .+.....
T Consensus 220 ~~~~~~dri~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 299 (538)
T 1yqt_A 220 VLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGS 299 (538)
T ss_dssp HHHHHCSEEEEEEEETTTEEEECCCEEHHHHHHHHHHTEETTTTEECSSSCCCCCCSSGGGSSCCCEEEEECCEEEEETT
T ss_pred HHHHhCCEEEEEcCcccccccccchhhHHHHHHHHhhhccchhhhcccccccccccCCcccccCCCeEEEEeeEEEEECC
Confidence 9987 99999998641 100 0000000
Q ss_pred ---------------ehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchh-hHHhHHH
Q psy18009 147 ---------------LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVL-FNNSIKA 210 (277)
Q Consensus 147 ---------------~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~-~n~~~~~ 210 (277)
...+|+||||||||+++|+|+.+|++|+|.+ ...|+|+||++.. ++.|+..
T Consensus 300 ~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~l~Gl~~p~~G~i~~-------------~~~i~~v~Q~~~~~~~~tv~~ 366 (538)
T 1yqt_A 300 FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEW-------------DLTVAYKPQYIKADYEGTVYE 366 (538)
T ss_dssp EEEEECCEEEETTCEEEEECCTTSSHHHHHHHHHTSSCCSBCCCCC-------------CCCEEEECSSCCCCCSSBHHH
T ss_pred EEEEeCccccCCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEE-------------CceEEEEecCCcCCCCCcHHH
Confidence 0124899999999999999999999999975 2369999999632 4445532
Q ss_pred Hhhcc-cChHHHHHHHHHHHHhcCCC
Q psy18009 211 IQKNF-VDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 211 ~~~~~-~~~~~~~~~~~~~~~~l~I~ 235 (277)
.-..+ .......+.+.++++.+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~~l~ 392 (538)
T 1yqt_A 367 LLSKIDASKLNSNFYKTELLKPLGII 392 (538)
T ss_dssp HHHHHHHHHHTCHHHHHHTTTTTTCG
T ss_pred HHHhhhccCCCHHHHHHHHHHHcCCh
Confidence 11111 00112345678889999885
No 5
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=99.96 E-value=5.9e-30 Score=253.04 Aligned_cols=179 Identities=21% Similarity=0.350 Sum_probs=139.7
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcch
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLST 122 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~e 122 (277)
.++++.+++....++++..|||||||||+|||||+.+|++|||||||++||+.++..++++|++++++.|+|+|||++++
T Consensus 120 ~~~l~~l~l~~~~~~~~~~LSgGe~Qrv~iA~aL~~~p~illlDEPts~LD~~~~~~l~~~l~~l~~g~tii~vsHdl~~ 199 (538)
T 3ozx_A 120 DEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLKNKYVIVVDHDLIV 199 (538)
T ss_dssp HHHHHHTTCGGGTTSBGGGCCHHHHHHHHHHHHHHSCCSEEEEESTTTTCCHHHHHHHHHHHHHHCTTSEEEEECSCHHH
T ss_pred HHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHhCCCEEEEEEeChHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999776789999999999
Q ss_pred hcc-CceEEEeeCcEEEE-----------------ec------------------------------Cce----------
Q psy18009 123 IIH-ADEILVMHAGEIVE-----------------RG------------------------------SLF---------- 144 (277)
Q Consensus 123 v~~-~Drv~vL~dG~iv~-----------------~g------------------------------~~~---------- 144 (277)
+.. ||||++|++|.... .+ ...
T Consensus 200 ~~~~~d~i~vl~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 279 (538)
T 3ozx_A 200 LDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMKIRPDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKL 279 (538)
T ss_dssp HHHHCSEEEEEEEETTTEEEECCCEEHHHHHHHHHHTEETTTTEECSSSCCCCSCC----------CCEEEEECCEEEEE
T ss_pred HHhhCCEEEEecCCcccccccchhhhHHHHHHHHHhhhchhhhhhccchhhhccccccccccccccccceEEEcceEEEE
Confidence 987 99999998642110 00 000
Q ss_pred ----e-----------eehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch-hhHHhH
Q psy18009 145 ----V-----------SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV-LFNNSI 208 (277)
Q Consensus 145 ----~-----------~~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~-~~n~~~ 208 (277)
. ....+|+||||||||+++|+|+.+|++|+|.+++ +.|+|+||+.. .+..++
T Consensus 280 ~~~~l~~~~~~i~~Gei~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~~------------~~i~~~~q~~~~~~~~tv 347 (538)
T 3ozx_A 280 GDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEK------------QILSYKPQRIFPNYDGTV 347 (538)
T ss_dssp TTEEEEECCEEEETTCEEEEECCTTSSHHHHHHHHTTSSCCSBCCEESSC------------CCEEEECSSCCCCCSSBH
T ss_pred CCEEEEeccceECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------eeeEeechhcccccCCCH
Confidence 0 0012489999999999999999999999998764 35899999842 223333
Q ss_pred HHH----hhcccChHHHHHHHHHHHHhcCCC
Q psy18009 209 KAI----QKNFVDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 209 ~~~----~~~~~~~~~~~~~~~~~~~~l~I~ 235 (277)
... ...+.+ .....++++++.+++.
T Consensus 348 ~~~l~~~~~~~~~--~~~~~~~~~l~~~~l~ 376 (538)
T 3ozx_A 348 QQYLENASKDALS--TSSWFFEEVTKRLNLH 376 (538)
T ss_dssp HHHHHHHCSSTTC--TTSHHHHHTTTTTTGG
T ss_pred HHHHHHhhhhccc--hhHHHHHHHHHHcCCH
Confidence 321 111221 2234567788888875
No 6
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=99.96 E-value=1.7e-29 Score=252.86 Aligned_cols=180 Identities=23% Similarity=0.335 Sum_probs=139.7
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++....++++..|||||||||+|||||+.+|++|||||||++||+.++..++++|+++.+ +.|+|+|||+++
T Consensus 210 ~~~L~~lgL~~~~~~~~~~LSGGekQRvaIAraL~~~P~lLlLDEPTs~LD~~~~~~l~~~L~~l~~~g~tvIivsHdl~ 289 (607)
T 3bk7_A 210 EEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLA 289 (607)
T ss_dssp HHHHHHTTCTTGGGSBGGGCCHHHHHHHHHHHHHHSCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHHcCCCchhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecChH
Confidence 5689999998889999999999999999999999999999999999999999999999999999965 568889999999
Q ss_pred hhcc-CceEEEeeCcE-----EEEe---------------------------------------cCceee----------
Q psy18009 122 TIIH-ADEILVMHAGE-----IVER---------------------------------------GSLFVS---------- 146 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~-----iv~~---------------------------------------g~~~~~---------- 146 (277)
++.. ||||++|+++. .... +.....
T Consensus 290 ~~~~~adri~vl~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 369 (607)
T 3bk7_A 290 VLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGS 369 (607)
T ss_dssp HHHHHCSEEEEEESCTTTEEEECCCEEHHHHHHHHHHTEETTTTEECCSSCCCCCCSTTSCCCCCCEEEEECCEEEECSS
T ss_pred HHHhhCCEEEEECCCccccceeccchhHHHHHHHHHhhcchhhhhhccccccccccCCCcccccCceEEEEeceEEEecc
Confidence 9986 99999998641 1100 000000
Q ss_pred ---------------ehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch-hhHHhHHH
Q psy18009 147 ---------------LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV-LFNNSIKA 210 (277)
Q Consensus 147 ---------------~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~-~~n~~~~~ 210 (277)
...+|+||||||||+++|+|+.+|++|+|.+ ...|+|+||++. .++.|+..
T Consensus 370 ~~l~~~~~~v~~Gei~~i~G~NGsGKSTLlk~l~Gl~~p~~G~I~~-------------~~~i~~v~Q~~~~~~~~tv~e 436 (607)
T 3bk7_A 370 FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEW-------------DLTVAYKPQYIKAEYEGTVYE 436 (607)
T ss_dssp CEEEECCEEEETTCEEEEECCTTSSHHHHHHHHHTSSCCSBSCCCC-------------CCCEEEECSSCCCCCSSBHHH
T ss_pred eEEEecccccCCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEE-------------eeEEEEEecCccCCCCCcHHH
Confidence 0124899999999999999999999999975 236999999963 34455532
Q ss_pred Hhhcc-cChHHHHHHHHHHHHhcCCC
Q psy18009 211 IQKNF-VDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 211 ~~~~~-~~~~~~~~~~~~~~~~l~I~ 235 (277)
.-..+ .......+.+.++++.+++.
T Consensus 437 ~~~~~~~~~~~~~~~~~~~l~~~~l~ 462 (607)
T 3bk7_A 437 LLSKIDSSKLNSNFYKTELLKPLGII 462 (607)
T ss_dssp HHHHHHHHHHHCHHHHHHTHHHHTCT
T ss_pred HHHhhhccCCCHHHHHHHHHHHcCCc
Confidence 21111 00112345678899999985
No 7
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=99.96 E-value=8.5e-30 Score=273.75 Aligned_cols=147 Identities=46% Similarity=0.694 Sum_probs=134.8
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCc--hHHhhcccCcccccCCeeec------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTP--ERAILKNISFTVPAGKTLAL------------------ 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~--~~~vL~~l~l~i~~~~~v~~------------------ 61 (277)
+|+++++++++++++.+..+..|+..|.|+|+||+|+|+. +.++|++++|++.+|++++.
T Consensus 1049 ~ri~~~l~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl 1128 (1321)
T 4f4c_A 1049 GIIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERF 1128 (1321)
T ss_dssp HHHHHHHHCCCSSCTTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTS
T ss_pred HHHHHHhhCcccCCCccCCCCCCCCCCeEEEEEEEEeCCCCCCCccccceeEEECCCCEEEEECCCCChHHHHHHHHhcC
Confidence 6789999999888766666667888999999999999974 34699999999999999874
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 1129 ~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~Gld 1208 (1321)
T 4f4c_A 1129 YDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFE 1208 (1321)
T ss_dssp SCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTC
T ss_pred ccCCCCEEEECCEEhhhCCHHHHHhheEEECCCCEeeCccHHHHHhccCCCCCCCHHHHHHHHHHhCChHHHHcCcCCCC
Confidence
Q ss_pred ---------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEe
Q psy18009 62 ---------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVM 132 (277)
Q Consensus 62 ---------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL 132 (277)
||||||||++|||||+++|+|||||||||+||+++.+.+.+.|+++.+++|+|+|+||++.+..||||+||
T Consensus 1209 T~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vl 1288 (1321)
T 4f4c_A 1209 TRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVV 1288 (1321)
T ss_dssp SEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEE
T ss_pred CEecCCCcccCHHHHHHHHHHHHHHhCCCEEEEeCccccCCHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred eCcEEEEecCceeeeh
Q psy18009 133 HAGEIVERGSLFVSLL 148 (277)
Q Consensus 133 ~dG~iv~~g~~~~~~~ 148 (277)
++|++++.|++.+...
T Consensus 1289 d~G~IvE~Gth~eLl~ 1304 (1321)
T 4f4c_A 1289 SNGTIIEKGTHTQLMS 1304 (1321)
T ss_dssp SSSSEEEEECHHHHHH
T ss_pred ECCEEEEECCHHHHHh
Confidence 9999999999876544
No 8
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.95 E-value=7.1e-28 Score=240.02 Aligned_cols=146 Identities=35% Similarity=0.597 Sum_probs=126.9
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCc-hHHhhcccCcccccCCeeec-------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLAL------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~-~~~vL~~l~l~i~~~~~v~~------------------- 61 (277)
+|++++++.+++..+.......++..+.|+|+||+|+|++ ...+|++++|++.+|+.++.
T Consensus 314 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~ 393 (587)
T 3qf4_A 314 KRVLEVLNEKPAIEEADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLI 393 (587)
T ss_dssp HHHHHHHHCCCSCCCCTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSS
T ss_pred HHHHHHHcCCCccCCCCCccccCCCCCcEEEEEEEEEcCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCc
Confidence 6888999888765543332223345678999999999974 46799999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 394 ~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~ 473 (587)
T 3qf4_A 394 DPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRV 473 (587)
T ss_dssp CCSEEEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEE
T ss_pred cCCCcEEEECCEEcccCCHHHHHhheEEECCCCcCcCccHHHHHhccCCCCCHHHHHHHHHHhCcHHHHHhcccchhhHh
Confidence
Q ss_pred ------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 62 ------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 62 ------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+++.++++.+++|+|+|||+++.+..||||++|++|
T Consensus 474 ~~~~~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G 553 (587)
T 3qf4_A 474 ERGGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEG 553 (587)
T ss_dssp CSSSCSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETT
T ss_pred cCCCCCcCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHhCCCCEEEEEecChHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999998788999999999998789999999999
Q ss_pred EEEEecCceeee
Q psy18009 136 EIVERGSLFVSL 147 (277)
Q Consensus 136 ~iv~~g~~~~~~ 147 (277)
++++.|++.+..
T Consensus 554 ~i~~~g~~~el~ 565 (587)
T 3qf4_A 554 KVAGFGTHKELL 565 (587)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEECCHHHHH
Confidence 999999876543
No 9
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=99.95 E-value=9.4e-28 Score=238.56 Aligned_cols=145 Identities=47% Similarity=0.714 Sum_probs=126.5
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCc-hHHhhcccCcccccCCeeec-------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLAL------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~-~~~vL~~l~l~i~~~~~v~~------------------- 61 (277)
+|++++++++++..+.....+.++..+.|+++||+|+|++ ...+|+++++++.+|+.++.
T Consensus 312 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~ 391 (578)
T 4a82_A 312 DRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFY 391 (578)
T ss_dssp HHHHHHHTCCCSSCCCTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred HHHHHHHcCCCcccCCCCccccCCCCCeEEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCChHHHHHHHHhcCC
Confidence 6889999988775443333322345678999999999975 45799999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 392 ~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~ 471 (578)
T 4a82_A 392 DVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEV 471 (578)
T ss_dssp CCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBC
T ss_pred CCCCcEEEECCEEhhhCCHHHHhhheEEEeCCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhCcchhhhhh
Confidence
Q ss_pred ------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 62 ------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 62 ------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+.+.++++.+++|+|+|||+++.+..||||++|++|
T Consensus 472 ~~~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 551 (578)
T 4a82_A 472 GERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENG 551 (578)
T ss_dssp CGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETT
T ss_pred ccCCCcCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECC
Confidence 89999999999999999999999999999999999999999999998888999999999998789999999999
Q ss_pred EEEEecCceee
Q psy18009 136 EIVERGSLFVS 146 (277)
Q Consensus 136 ~iv~~g~~~~~ 146 (277)
++++.|++.+.
T Consensus 552 ~i~~~g~~~el 562 (578)
T 4a82_A 552 HIVETGTHREL 562 (578)
T ss_dssp EEEEEECHHHH
T ss_pred EEEEECCHHHH
Confidence 99999987654
No 10
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-27 Score=239.82 Aligned_cols=180 Identities=24% Similarity=0.336 Sum_probs=136.7
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l~ 121 (277)
.++|+.+++....++++..|||||||||+|||||+.+|++|||||||++||+.++..++++|+++++. .|+|+|||+++
T Consensus 203 ~~~l~~~gl~~~~~~~~~~LSgGe~Qrv~iAraL~~~p~llllDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHdl~ 282 (608)
T 3j16_B 203 KRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLS 282 (608)
T ss_dssp HHHHHHHTCTGGGGSCTTTCCHHHHHHHHHHHHHHSCCSEEEEECTTTTCCHHHHHHHHHHHHGGGTTTCEEEEECSCHH
T ss_pred HHHHHHcCCcchhCCChHHCCHHHHHHHHHHHHHHhCCCEEEEECcccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999764 58888999999
Q ss_pred hhcc-CceEEEeeCcEEEEe-----------------c----------------------C-ce----------------
Q psy18009 122 TIIH-ADEILVMHAGEIVER-----------------G----------------------S-LF---------------- 144 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~-----------------g----------------------~-~~---------------- 144 (277)
++.. ||||++|++|..+.. + . ..
T Consensus 283 ~~~~~~drv~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 362 (608)
T 3j16_B 283 VLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADATEDLQNDSASRAFSYPSLKKT 362 (608)
T ss_dssp HHHHHCSEEEEEESCTTTEEEECCCEEHHHHHHHHHHTEETTTTEECSSSCCCCCCSSSSCCCCCCSSSSCCEECCEEEE
T ss_pred HHHHhCCEEEEEeCCccccceecCchhHHHHHHHhhccccchhhhccccccccccccccccceeeeccceeEEecCcccc
Confidence 9987 999999986431100 0 0 00
Q ss_pred ----------------eeehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc-hhhHHh
Q psy18009 145 ----------------VSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT-VLFNNS 207 (277)
Q Consensus 145 ----------------~~~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~-~~~n~~ 207 (277)
+....+|+||||||||+++|+|+.+|++|+. +. ..+++|+||+. ..+..+
T Consensus 363 l~~vsl~v~~G~~~~GEiv~iiG~NGsGKSTLlk~l~Gl~~p~~G~~------~~-------~~~i~~~~q~~~~~~~~t 429 (608)
T 3j16_B 363 QGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQD------IP-------KLNVSMKPQKIAPKFPGT 429 (608)
T ss_dssp CSSCEEEECCEECCTTCEEEEESCTTSSHHHHHHHHHTSSCCSBCCC------CC-------SCCEEEECSSCCCCCCSB
T ss_pred cCceEEEEecCccccceEEEEECCCCCcHHHHHHHHhcCCCCCCCcC------cc-------CCcEEEecccccccCCcc
Confidence 0011248999999999999999999999862 11 34699999984 233334
Q ss_pred HHHH-hhcccChHHHHHHHHHHHHhcCCC
Q psy18009 208 IKAI-QKNFVDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 208 ~~~~-~~~~~~~~~~~~~~~~~~~~l~I~ 235 (277)
+..+ ...+.......+.+.++++.+++.
T Consensus 430 v~e~~~~~~~~~~~~~~~~~~~l~~l~l~ 458 (608)
T 3j16_B 430 VRQLFFKKIRGQFLNPQFQTDVVKPLRID 458 (608)
T ss_dssp HHHHHHHHCSSTTTSHHHHHHTHHHHTST
T ss_pred HHHHHHHHhhcccccHHHHHHHHHHcCCh
Confidence 4322 111111111234567888888886
No 11
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.95 E-value=1.5e-27 Score=238.13 Aligned_cols=144 Identities=45% Similarity=0.701 Sum_probs=126.1
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCchHHhhcccCcccccCCeeec--------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLAL-------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~~~~vL~~l~l~i~~~~~v~~-------------------- 61 (277)
+|++++++.+++.+. +.....++..|.|+++||+|+|+++..+|+++++++.+|+.++.
T Consensus 328 ~ri~~~l~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~ 406 (598)
T 3qf4_B 328 ERIFEILDLEEEKDD-PDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYD 406 (598)
T ss_dssp HHHHHHTTSCCCCCC-SSCCCCCSCCCCEEEEEEECCSSSSSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSC
T ss_pred HHHHHHHcCCCCCCC-CCCCCCCCCCCeEEEEEEEEECCCCCccccceEEEEcCCCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 688899988776532 22222344567899999999997666799999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 407 p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 486 (598)
T 3qf4_B 407 VDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLT 486 (598)
T ss_dssp CSEEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCH
T ss_pred CCCeEEEECCEEhhhCCHHHHHhceEEEeCCCccccccHHHHHhcCCCCCCHHHHHHHHHHhCCHHHHHhccccccchhc
Confidence
Q ss_pred -----cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCcE
Q psy18009 62 -----LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGE 136 (277)
Q Consensus 62 -----LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG~ 136 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+.+.++++.+++|+|+|||+++.+..||||++|++|+
T Consensus 487 ~~g~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 566 (598)
T 3qf4_B 487 DNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGE 566 (598)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCE
Confidence 899999999999999999999999999999999999999999999988889999999999987899999999999
Q ss_pred EEEecCceee
Q psy18009 137 IVERGSLFVS 146 (277)
Q Consensus 137 iv~~g~~~~~ 146 (277)
+++.|++.+.
T Consensus 567 i~~~g~~~~l 576 (598)
T 3qf4_B 567 IVEMGKHDEL 576 (598)
T ss_dssp EEECSCHHHH
T ss_pred EEEECCHHHH
Confidence 9999987654
No 12
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=99.94 E-value=2.2e-27 Score=247.40 Aligned_cols=147 Identities=29% Similarity=0.403 Sum_probs=126.2
Q ss_pred HHhhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcc
Q psy18009 43 RAILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ 121 (277)
..+|+.+++. ...++++..||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .++|+|+|||+++
T Consensus 529 ~~~L~~lgL~~~~~~~~~~~LSGGqkQRvaLArAL~~~P~lLLLDEPTs~LD~~~~~~l~~~L~~--~g~tvIivSHdl~ 606 (986)
T 2iw3_A 529 KDKLIEFGFTDEMIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNT--CGITSITISHDSV 606 (986)
T ss_dssp HHHHHHTTCCHHHHHSBGGGCCHHHHHHHHHHHHHHTTCSEEEEESTTTTCCHHHHHHHHHHHHH--SCSEEEEECSCHH
T ss_pred HHHHHHcCCChhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHh--CCCEEEEEECCHH
Confidence 4578999994 567889999999999999999999999999999999999999999999999998 5679999999999
Q ss_pred hhcc-CceEEEeeCcEEE-EecCce----------------------------------------eee------------
Q psy18009 122 TIIH-ADEILVMHAGEIV-ERGSLF----------------------------------------VSL------------ 147 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv-~~g~~~----------------------------------------~~~------------ 147 (277)
++.. |||+++|++|+++ ..|+.. ..+
T Consensus 607 ~l~~~adrii~L~~G~iv~~~G~~~e~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~mL~v~nLs~~Y~g~~~ 686 (986)
T 2iw3_A 607 FLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLEFKFPEPGYLEGVKTKQKAIVKVTNMEFQYPGTSK 686 (986)
T ss_dssp HHHHHCSEEEEEETTEEEEEESCHHHHHHHCGGGGGSSSTTTCCCCCCCCCCCCCTTCCSTTSEEEEEEEEEECCTTCSS
T ss_pred HHHHhCCEEEEEECCeeecCCCCHHHHHhhhHHHHHHHhhhhhhhhccccccccccccccCCCceEEEEeeEEEeCCCCc
Confidence 9986 9999999999986 233100 000
Q ss_pred ----------------hhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch
Q psy18009 148 ----------------LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV 202 (277)
Q Consensus 148 ----------------~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~ 202 (277)
..+|+||||||||+++|+|+.+|++|+|+++|. ..|+|++|++.
T Consensus 687 ~iL~dVSl~I~~GeivaIiGpNGSGKSTLLklLaGll~P~sG~I~~~~~-----------~~I~yv~Q~~~ 746 (986)
T 2iw3_A 687 PQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHEN-----------CRIAYIKQHAF 746 (986)
T ss_dssp CSEEEEEEEEETTCEEEECSCCCHHHHHHHHHHTTSSCCSEEEEEECTT-----------CCEEEECHHHH
T ss_pred eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEcCc-----------cceEeeccchh
Confidence 013889999999999999999999999999862 25999999863
No 13
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=99.94 E-value=1.1e-26 Score=211.84 Aligned_cols=102 Identities=30% Similarity=0.411 Sum_probs=91.6
Q ss_pred HhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHh-c-CceEEEEecCcc
Q psy18009 44 AILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC-A-SRTTIIVAHRLS 121 (277)
Q Consensus 44 ~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~-~-~~tiIiIsH~l~ 121 (277)
++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.++++|++++ + +.|+|+|||+++
T Consensus 126 ~~l~~~~L~~~~~~~~~~LSgGqkQRv~iAraL~~~P~lLlLDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHdl~ 205 (275)
T 3gfo_A 126 NALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDID 205 (275)
T ss_dssp HHHHHTTCGGGTTSBGGGSCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHHCCEEEEEESCCS
T ss_pred HHHHHcCCchhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHHhhCCCEEEEEecCHH
Confidence 35667777666777777799999999999999999999999999999999999999999999986 4 568899999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCcee
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
++.. ||||++|++|+++..|+...
T Consensus 206 ~~~~~~drv~~l~~G~i~~~g~~~~ 230 (275)
T 3gfo_A 206 IVPLYCDNVFVMKEGRVILQGNPKE 230 (275)
T ss_dssp SGGGGCSEEEEEETTEEEEEECHHH
T ss_pred HHHHhCCEEEEEECCEEEEECCHHH
Confidence 9986 99999999999999888654
No 14
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=99.94 E-value=2.4e-26 Score=228.54 Aligned_cols=143 Identities=49% Similarity=0.744 Sum_probs=123.1
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCch-HHhhcccCcccccCCeeec-------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPE-RAILKNISFTVPAGKTLAL------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~~-~~vL~~l~l~i~~~~~v~~------------------- 61 (277)
+|++++++.+++.++. ..+.++..+.|+++||+|+|++. ..+|+++++++.+|+.++.
T Consensus 316 ~ri~~~l~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~ 393 (582)
T 3b60_A 316 QTLFAILDSEQEKDEG--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFY 393 (582)
T ss_dssp HHHHHHHHSCCSCCCC--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred HHHHHHHcCCCCccCC--CCCCCCCCCcEEEEEEEEEcCCCCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcc
Confidence 6788888887664321 11222345789999999999743 6799999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 394 ~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~ 473 (582)
T 3b60_A 394 DIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTI 473 (582)
T ss_dssp CCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSB
T ss_pred CCCCCeEEECCEEccccCHHHHHhhCeEEccCCcCCCCCHHHHHhccCCCCCCHHHHHHHHHHcCCHHHHHhcccccccc
Confidence
Q ss_pred -------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeC
Q psy18009 62 -------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHA 134 (277)
Q Consensus 62 -------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~d 134 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+.+.++++.+++|+|+|||+++.+..||||++|++
T Consensus 474 ~~~~~~~LSgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 553 (582)
T 3b60_A 474 IGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVED 553 (582)
T ss_dssp CCTTSCSSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEET
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999999999877899999999998877999999999
Q ss_pred cEEEEecCceee
Q psy18009 135 GEIVERGSLFVS 146 (277)
Q Consensus 135 G~iv~~g~~~~~ 146 (277)
|++++.|++.+.
T Consensus 554 G~i~~~g~~~~l 565 (582)
T 3b60_A 554 GIIVERGTHSEL 565 (582)
T ss_dssp TEEEEEECHHHH
T ss_pred CEEEEecCHHHH
Confidence 999998886543
No 15
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=99.94 E-value=1.3e-26 Score=219.20 Aligned_cols=84 Identities=39% Similarity=0.625 Sum_probs=79.0
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcchhcc-CceEEEeeCcEEE
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLSTIIH-ADEILVMHAGEIV 138 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ev~~-~Drv~vL~dG~iv 138 (277)
|||||||||+|||||+.+|++||||||||+||+.++..++++|+++++ +.|+|+|||+++++.. ||||++|++|+++
T Consensus 164 LSGGqkQRVaIArAL~~~P~lLLlDEPTs~LD~~~~~~i~~lL~~l~~~~g~Tii~vTHdl~~~~~~aDrv~vl~~G~iv 243 (366)
T 3tui_C 164 LSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELI 243 (366)
T ss_dssp SCHHHHHHHHHHHHTTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEETTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999999964 5688899999999986 9999999999999
Q ss_pred EecCcee
Q psy18009 139 ERGSLFV 145 (277)
Q Consensus 139 ~~g~~~~ 145 (277)
+.|+...
T Consensus 244 ~~g~~~e 250 (366)
T 3tui_C 244 EQDTVSE 250 (366)
T ss_dssp ECCBHHH
T ss_pred EEcCHHH
Confidence 9987654
No 16
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=99.94 E-value=2.9e-26 Score=227.90 Aligned_cols=142 Identities=46% Similarity=0.718 Sum_probs=122.5
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCch-HHhhcccCcccccCCeeec-------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPE-RAILKNISFTVPAGKTLAL------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~~-~~vL~~l~l~i~~~~~v~~------------------- 61 (277)
+|++++++.+++.++. ..+.++..+.|+++||+|+|++. ..+|+++++++.+|+.++.
T Consensus 316 ~ri~~~l~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~ 393 (582)
T 3b5x_A 316 QTLFGLMDLETERDNG--KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFY 393 (582)
T ss_pred HHHHHHHcCCCcCCCC--CCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 6788888877664321 11222335789999999999743 6799999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 394 ~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~ 473 (582)
T 3b5x_A 394 DVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTV 473 (582)
T ss_pred CCCCCEEEECCEEhhhCCHHHHhcCeEEEcCCCccccccHHHHHhccCCCCCCHHHHHHHHHHCCCHHHHHhCcccccch
Confidence
Q ss_pred -------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeC
Q psy18009 62 -------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHA 134 (277)
Q Consensus 62 -------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~d 134 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+.+.++++.+++|+|+|||+++.+..||||++|++
T Consensus 474 ~~~~~~~LSgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 553 (582)
T 3b5x_A 474 IGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDE 553 (582)
T ss_pred hcCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999999999877799999999999878999999999
Q ss_pred cEEEEecCcee
Q psy18009 135 GEIVERGSLFV 145 (277)
Q Consensus 135 G~iv~~g~~~~ 145 (277)
|++++.|++..
T Consensus 554 G~i~~~g~~~~ 564 (582)
T 3b5x_A 554 GEIIERGRHAD 564 (582)
T ss_pred CEEEEECCHHH
Confidence 99999888754
No 17
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=99.93 E-value=3.1e-26 Score=228.26 Aligned_cols=145 Identities=41% Similarity=0.615 Sum_probs=122.4
Q ss_pred ccHHHhhcccccccCCCCCccccccCce-EEEeeeeeeeCch--HHhhcccCcccccCCeeec-----------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGA-VEFRNVSFSYTPE--RAILKNISFTVPAGKTLAL----------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~nvsf~Y~~~--~~vL~~l~l~i~~~~~v~~----------------- 61 (277)
+|++++++.+++..+.....+..+..+. |+++||+|+|++. ..+|+++++++.+|+.++.
T Consensus 313 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g 392 (595)
T 2yl4_A 313 GRLWELLEREPKLPFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLR 392 (595)
T ss_dssp HHHHHHHTCCCSSCSSCSBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTT
T ss_pred HHHHHHHcCCCccCCCCCCCCCcCCCCCeEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 6788888877664332111111223567 9999999999642 4699999999999998763
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 393 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g 472 (595)
T 2yl4_A 393 LYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQG 472 (595)
T ss_dssp SSCCSEEEEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSG
T ss_pred CcCCCCcEEEECCEEhhhCCHHHHHhceEEEccCCcccCCCHHHHHhhcCCCccccCHHHHHHHHHHcCCHHHHHhCccc
Confidence
Q ss_pred -----------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEE
Q psy18009 62 -----------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEIL 130 (277)
Q Consensus 62 -----------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~ 130 (277)
||||||||++|||||+++|++||||||||+||+.+.+.+.+.++++.+++|+|+|||+++.+..||||+
T Consensus 473 ~~~~~~~~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~ 552 (595)
T 2yl4_A 473 FNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVA 552 (595)
T ss_dssp GGCBCSSSSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEE
T ss_pred ccccccCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECcccCCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHcCCEEE
Confidence 899999999999999999999999999999999999999999999988789999999999887799999
Q ss_pred EeeCcEEEEecCceee
Q psy18009 131 VMHAGEIVERGSLFVS 146 (277)
Q Consensus 131 vL~dG~iv~~g~~~~~ 146 (277)
+|++|++++.|++.+.
T Consensus 553 ~l~~G~i~~~g~~~~l 568 (595)
T 2yl4_A 553 VLDQGKITEYGKHEEL 568 (595)
T ss_dssp EEETTEEEEEECSCC-
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999998887654
No 18
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=99.93 E-value=1.1e-26 Score=234.19 Aligned_cols=97 Identities=28% Similarity=0.489 Sum_probs=87.2
Q ss_pred hcccCccc-ccCCeeeccCHHHHHHHHHHHHhccCCC--EEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 46 LKNISFTV-PAGKTLALLSGGEKQRVAIARTLLKAPQ--IVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 46 L~~l~l~i-~~~~~v~~LSgGqrQrv~IAral~~~p~--ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
|+.+++.- ..++++..|||||||||+|||||+.+|+ +|||||||++||+.++..++++|+++++ +.|+|+|||+++
T Consensus 186 l~~~gL~~~~~~~~~~~LSGGe~QRv~iArAL~~~p~~~lLlLDEPtsgLD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~ 265 (670)
T 3ux8_A 186 LQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGNTLIVVEHDED 265 (670)
T ss_dssp HHHTTCTTCCTTCBGGGSCHHHHHHHHHHHHHHTCCCSCEEEEECTTTTCCGGGHHHHHHHHHHHHHTTCEEEEECCCHH
T ss_pred HHHcCCchhhhcCCcccCCHHHHHHHHHHHHHhhCCCCCEEEEECCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 77788864 3689999999999999999999999988 9999999999999999999999999975 468889999999
Q ss_pred hhccCceEEEe------eCcEEEEecC
Q psy18009 122 TIIHADEILVM------HAGEIVERGS 142 (277)
Q Consensus 122 ev~~~Drv~vL------~dG~iv~~g~ 142 (277)
++..|||+++| ++|+++..|+
T Consensus 266 ~~~~~d~ii~l~~g~~~~~G~i~~~g~ 292 (670)
T 3ux8_A 266 TMLAADYLIDIGPGAGIHGGEVVAAGT 292 (670)
T ss_dssp HHHHCSEEEEECSSSGGGCCSEEEEEC
T ss_pred HHhhCCEEEEecccccccCCEEEEecC
Confidence 76669999999 8999987664
No 19
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=99.93 E-value=4.8e-26 Score=206.48 Aligned_cols=89 Identities=34% Similarity=0.496 Sum_probs=80.3
Q ss_pred CeeeccCHHHHHHHHHHHHhcc------CCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-Cc-eEEEEecCcchhcc-Cc
Q psy18009 57 KTLALLSGGEKQRVAIARTLLK------APQIVLLDEATSALDTKTERNIQSALNRVCA-SR-TTIIVAHRLSTIIH-AD 127 (277)
Q Consensus 57 ~~v~~LSgGqrQrv~IAral~~------~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~-tiIiIsH~l~ev~~-~D 127 (277)
+++..|||||||||+|||||+. +|++|||||||++||+..+..++++|+++++ ++ |+|+|||+++++.. ||
T Consensus 137 ~~~~~LSgGq~QRv~iAraL~~~~~~~~~p~lLllDEPts~LD~~~~~~i~~~l~~l~~~~~~tvi~vtHdl~~~~~~~d 216 (266)
T 4g1u_C 137 RDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYAD 216 (266)
T ss_dssp SBGGGCCHHHHHHHHHHHHHHHTCCSSCCCEEEEECCCCSSCCHHHHHHHHHHHHHHHHHSSEEEEEECSCHHHHHHHCS
T ss_pred CCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCCEEEEEEcCHHHHHHhCC
Confidence 3333399999999999999999 9999999999999999999999999999965 44 88889999999986 99
Q ss_pred eEEEeeCcEEEEecCcee
Q psy18009 128 EILVMHAGEIVERGSLFV 145 (277)
Q Consensus 128 rv~vL~dG~iv~~g~~~~ 145 (277)
|+++|++|++++.|+...
T Consensus 217 ~v~vl~~G~i~~~g~~~~ 234 (266)
T 4g1u_C 217 RIMLLAQGKLVACGTPEE 234 (266)
T ss_dssp EEEEEETTEEEEEECHHH
T ss_pred EEEEEECCEEEEEcCHHH
Confidence 999999999999887654
No 20
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=99.93 E-value=9.4e-26 Score=214.41 Aligned_cols=102 Identities=32% Similarity=0.510 Sum_probs=92.3
Q ss_pred HhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 44 AILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 44 ~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++|+.+++....++++..|||||||||+|||||+.+|++||||||||+||+..+..+++.|+++.+ +.|+|+|||+++
T Consensus 116 ~~l~~~~L~~~~~r~p~~LSGGqrQRVaiArAL~~~P~lLLLDEPts~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd~~ 195 (381)
T 3rlf_A 116 QVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV 195 (381)
T ss_dssp HHHHHTTCGGGTTCCGGGSCHHHHHHHHHHHHHHHCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH
T ss_pred HHHHHcCCchhhcCChhHCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 467777777777777788999999999999999999999999999999999999999999999964 568889999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCcee
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
++.. ||||++|++|+++..|++..
T Consensus 196 ea~~~aDri~vl~~G~i~~~g~~~~ 220 (381)
T 3rlf_A 196 EAMTLADKIVVLDAGRVAQVGKPLE 220 (381)
T ss_dssp HHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHhCCEEEEEECCEEEEEeCHHH
Confidence 9987 99999999999999887654
No 21
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=99.92 E-value=2.9e-25 Score=199.13 Aligned_cols=89 Identities=52% Similarity=0.805 Sum_probs=81.5
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++.++.|+|++||+++++..|||+++|++|
T Consensus 140 ~~~~~~LSgGq~qRv~iAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~g~tviivtH~~~~~~~~d~v~~l~~G 219 (247)
T 2ff7_A 140 GEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKG 219 (247)
T ss_dssp STTTTCCCHHHHHHHHHHHHHTTCCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGGGTTSSEEEEEETT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 34556799999999999999999999999999999999999999999999997667899999999988669999999999
Q ss_pred EEEEecCce
Q psy18009 136 EIVERGSLF 144 (277)
Q Consensus 136 ~iv~~g~~~ 144 (277)
++++.|+..
T Consensus 220 ~i~~~g~~~ 228 (247)
T 2ff7_A 220 KIVEQGKHK 228 (247)
T ss_dssp EEEEEECHH
T ss_pred EEEEECCHH
Confidence 999887654
No 22
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=99.92 E-value=1.7e-25 Score=239.92 Aligned_cols=146 Identities=43% Similarity=0.672 Sum_probs=125.7
Q ss_pred ccHHHhhcccccccCCC-CCccccccCceEEEeeeeeeeCch--HHhhcccCcccccCCeeec-----------------
Q psy18009 2 ENMFDLLQETCDVIDIP-QAPMLCVAQGAVEFRNVSFSYTPE--RAILKNISFTVPAGKTLAL----------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~nvsf~Y~~~--~~vL~~l~l~i~~~~~v~~----------------- 61 (277)
+|++++++.+++.+..+ .....++..|.|+|+||+|+|+.. ..+|++++|++.+|+.++.
T Consensus 1002 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g 1081 (1284)
T 3g5u_A 1002 SHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLER 1081 (1284)
T ss_dssp HHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCcccccccccccccCCCCcEEEEEEEEECCCCCCCeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 57788888877754322 122223457889999999999743 3689999999999998864
Q ss_pred --------------------------------------------------------------------------------
Q psy18009 62 -------------------------------------------------------------------------------- 61 (277)
Q Consensus 62 -------------------------------------------------------------------------------- 61 (277)
T Consensus 1082 ~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gl 1161 (1284)
T 3g5u_A 1082 FYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKY 1161 (1284)
T ss_dssp SSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGG
T ss_pred CcCCCCCEEEECCEEcccCCHHHHHhceEEECCCCccccccHHHHHhccCCCCCCCHHHHHHHHHHhCcHHHHHhCcccc
Confidence
Q ss_pred ----------cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEE
Q psy18009 62 ----------LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILV 131 (277)
Q Consensus 62 ----------LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~v 131 (277)
|||||||||+|||||+++|++|||||||++||+.+.+.+.+.++++.+++|+|+||||++++..||||+|
T Consensus 1162 dt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~v 1241 (1284)
T 3g5u_A 1162 NTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVV 1241 (1284)
T ss_dssp GCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEE
T ss_pred ccccCCCCCccCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHhCCCCEEEEEecCHHHHHcCCEEEE
Confidence 9999999999999999999999999999999999999999999998777899999999999977999999
Q ss_pred eeCcEEEEecCceeee
Q psy18009 132 MHAGEIVERGSLFVSL 147 (277)
Q Consensus 132 L~dG~iv~~g~~~~~~ 147 (277)
|++|++++.|++....
T Consensus 1242 l~~G~i~~~g~~~~l~ 1257 (1284)
T 3g5u_A 1242 IQNGKVKEHGTHQQLL 1257 (1284)
T ss_dssp EETBEEEEEECHHHHH
T ss_pred EECCEEEEECCHHHHH
Confidence 9999999999876543
No 23
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=99.92 E-value=6e-25 Score=197.93 Aligned_cols=102 Identities=25% Similarity=0.432 Sum_probs=94.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.++++|+++++ +.|+|++||+++
T Consensus 135 ~~~l~~~~l~~~~~~~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~ 214 (257)
T 1g6h_A 135 FKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLD 214 (257)
T ss_dssp HHHHHHTTCGGGTTSBGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred HHHHHHcCCchhhCCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH
Confidence 3578999998888999999999999999999999999999999999999999999999999999965 468888999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCce
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++.. |||+++|++|+++..|+..
T Consensus 215 ~~~~~~d~v~~l~~G~i~~~g~~~ 238 (257)
T 1g6h_A 215 IVLNYIDHLYVMFNGQIIAEGRGE 238 (257)
T ss_dssp TTGGGCSEEEEEETTEEEEEEESH
T ss_pred HHHHhCCEEEEEECCEEEEEeCHH
Confidence 9986 9999999999999876643
No 24
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=99.92 E-value=1.2e-24 Score=196.45 Aligned_cols=90 Identities=53% Similarity=0.746 Sum_probs=82.2
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.|++++++.|+|++||+++++..|||+++|++|
T Consensus 150 ~~~~~~LSgGqkqRv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~l~~~~tviivtH~~~~~~~~d~i~~l~~G 229 (260)
T 2ghi_A 150 GNKGMKLSGGERQRIAIARCLLKDPKIVIFDEATSSLDSKTEYLFQKAVEDLRKNRTLIIIAHRLSTISSAESIILLNKG 229 (260)
T ss_dssp SSSSBCCCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCHHHHHHHHHHHHHHTTTSEEEEECSSGGGSTTCSEEEEEETT
T ss_pred cCCcCcCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECC
Confidence 35567799999999999999999999999999999999999999999999997767899999999988669999999999
Q ss_pred EEEEecCcee
Q psy18009 136 EIVERGSLFV 145 (277)
Q Consensus 136 ~iv~~g~~~~ 145 (277)
+++..|+...
T Consensus 230 ~i~~~g~~~~ 239 (260)
T 2ghi_A 230 KIVEKGTHKD 239 (260)
T ss_dssp EEEEEECHHH
T ss_pred EEEEECCHHH
Confidence 9998877543
No 25
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=99.91 E-value=2.4e-25 Score=198.86 Aligned_cols=89 Identities=45% Similarity=0.741 Sum_probs=81.5
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|++++++.|+|++||+++++..|||+++|++|
T Consensus 134 ~~~~~~LSgGq~qrv~lAral~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~v~~l~~G 213 (243)
T 1mv5_A 134 GERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKG 213 (243)
T ss_dssp STTSBCCCHHHHHHHHHHHHHHHCCSEEEEECCSCSSCSSSCCHHHHHHHHHHTTSEEEEECCSHHHHHHCSEEEEEETT
T ss_pred ccCcCcCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCChHHHHhCCEEEEEECC
Confidence 45567899999999999999999999999999999999999999999999998667899999999987669999999999
Q ss_pred EEEEecCce
Q psy18009 136 EIVERGSLF 144 (277)
Q Consensus 136 ~iv~~g~~~ 144 (277)
+++..|+..
T Consensus 214 ~i~~~g~~~ 222 (243)
T 1mv5_A 214 QITGSGKHN 222 (243)
T ss_dssp EECCCSCHH
T ss_pred EEEEeCCHH
Confidence 999877654
No 26
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=99.91 E-value=5.9e-25 Score=209.54 Aligned_cols=123 Identities=31% Similarity=0.525 Sum_probs=110.3
Q ss_pred cccCceEEEeeeeeeeCc-hHHhhcccCcccccCCeeec-----------------------------------------
Q psy18009 24 CVAQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLAL----------------------------------------- 61 (277)
Q Consensus 24 ~~~~g~i~~~nvsf~Y~~-~~~vL~~l~l~i~~~~~v~~----------------------------------------- 61 (277)
|+..+.|+++||+|+|+. ...+|++++|++.+|+.++.
T Consensus 14 ~~~~~~i~~~~l~~~y~~~~~~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~~~G~I~i~G~~i~~~~~~~~r 93 (390)
T 3gd7_A 14 WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLEQWR 93 (390)
T ss_dssp SSSSCCEEEEEEEEESSSSSCCSEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTCSEEEEEEEESSCBTTSSCHHHHH
T ss_pred CCCCCeEEEEEEEEEecCCCeEEeeceeEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCeEEEECCEECCcCChHHHh
Confidence 566788999999999963 46799999999999997753
Q ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHhccC
Q psy18009 62 --------------------------------------------------------------LSGGEKQRVAIARTLLKA 79 (277)
Q Consensus 62 --------------------------------------------------------------LSgGqrQrv~IAral~~~ 79 (277)
|||||||||+|||||+.+
T Consensus 94 r~ig~v~Q~~~lf~~tv~enl~~~~~~~~~~v~~~l~~~~L~~~~~~~p~~l~~~i~~~g~~LSGGqrQRvalARAL~~~ 173 (390)
T 3gd7_A 94 KAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSK 173 (390)
T ss_dssp HTEEEESCCCCCCSEEHHHHHCTTCCSCHHHHHHHHHHTTCHHHHTTSTTGGGCEECTTTTTSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEcCCcccCccCHHHHhhhccccCHHHHHHHHHHhCCHHHHhhcccccccccccccccCCHHHHHHHHHHHHHhcC
Confidence 799999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCcEEEEecCceee
Q psy18009 80 PQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFVS 146 (277)
Q Consensus 80 p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG~iv~~g~~~~~ 146 (277)
|++||||||||+||+..+..+.+.|+++..+.|+|++||+++.+..||||++|++|+++..|++...
T Consensus 174 P~lLLLDEPts~LD~~~~~~l~~~l~~~~~~~tvi~vtHd~e~~~~aDri~vl~~G~i~~~g~~~el 240 (390)
T 3gd7_A 174 AKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILEL 240 (390)
T ss_dssp CCEEEEESHHHHSCHHHHHHHHHHHHTTTTTSCEEEECSSSGGGTTCSEEEEEETTEEEEESSHHHH
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcCHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999988767799999999876656999999999999999886543
No 27
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=99.91 E-value=1.2e-24 Score=193.69 Aligned_cols=100 Identities=34% Similarity=0.513 Sum_probs=89.8
Q ss_pred HhhcccCcccc-cCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 44 AILKNISFTVP-AGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 44 ~vL~~l~l~i~-~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
++|+.+++.-. .++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.++++++ +.|+|+|||++
T Consensus 127 ~~l~~~~l~~~~~~~~~~~LSgGq~QRv~iAral~~~p~llllDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd~ 206 (235)
T 3tif_A 127 ECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI 206 (235)
T ss_dssp HHHHHTTCCGGGTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCH
T ss_pred HHHHHCCCChhhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 46888888654 5889999999999999999999999999999999999999999999999999964 56899999999
Q ss_pred chhccCceEEEeeCcEEEEecCc
Q psy18009 121 STIIHADEILVMHAGEIVERGSL 143 (277)
Q Consensus 121 ~ev~~~Drv~vL~dG~iv~~g~~ 143 (277)
+.+..||||++|++|+++..++.
T Consensus 207 ~~~~~~d~i~~l~~G~i~~~~~~ 229 (235)
T 3tif_A 207 NVARFGERIIYLKDGEVEREEKL 229 (235)
T ss_dssp HHHTTSSEEEEEETTEEEEEEEC
T ss_pred HHHHhCCEEEEEECCEEEEEcCh
Confidence 86545999999999999987654
No 28
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=99.91 E-value=1.2e-24 Score=192.21 Aligned_cols=100 Identities=26% Similarity=0.406 Sum_probs=91.7
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ +.|+|++||+++
T Consensus 122 ~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 201 (224)
T 2pcj_A 122 EYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERE 201 (224)
T ss_dssp HHHHHHTTCTTCTTCCGGGSCHHHHHHHHHHHHTTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3578999998788999999999999999999999999999999999999999999999999999965 468888999999
Q ss_pred hhccCceEEEeeCcEEEEecC
Q psy18009 122 TIIHADEILVMHAGEIVERGS 142 (277)
Q Consensus 122 ev~~~Drv~vL~dG~iv~~g~ 142 (277)
++..|||+++|++|+++..|+
T Consensus 202 ~~~~~d~v~~l~~G~i~~~g~ 222 (224)
T 2pcj_A 202 LAELTHRTLEMKDGKVVGEIT 222 (224)
T ss_dssp HHTTSSEEEEEETTEEEEEEE
T ss_pred HHHhCCEEEEEECCEEEEEee
Confidence 874499999999999998765
No 29
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=193.87 Aligned_cols=90 Identities=36% Similarity=0.529 Sum_probs=80.7
Q ss_pred cCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHH---HHhcCceEEEEecCcchhccCceEEE
Q psy18009 55 AGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALN---RVCASRTTIIVAHRLSTIIHADEILV 131 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~---~l~~~~tiIiIsH~l~ev~~~Drv~v 131 (277)
.++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.+. ++.++.|+|++||+++++..|||+++
T Consensus 121 ~~~~~~~LSgGqkqRv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~~~~~~tviivtH~~~~~~~~d~v~~ 200 (237)
T 2cbz_A 121 IGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIV 200 (237)
T ss_dssp ESTTSBCCCHHHHHHHHHHHHHHHCCSEEEEESTTTTSCHHHHHHHHHHTTSTTSTTTTSEEEEECSCSTTGGGSSEEEE
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHHhhcCCCEEEEEecChHHHHhCCEEEE
Confidence 356788999999999999999999999999999999999999999999995 44455689999999998766999999
Q ss_pred eeCcEEEEecCce
Q psy18009 132 MHAGEIVERGSLF 144 (277)
Q Consensus 132 L~dG~iv~~g~~~ 144 (277)
|++|+++..|+..
T Consensus 201 l~~G~i~~~g~~~ 213 (237)
T 2cbz_A 201 MSGGKISEMGSYQ 213 (237)
T ss_dssp EETTEEEEEECHH
T ss_pred EeCCEEEEeCCHH
Confidence 9999999887654
No 30
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=99.91 E-value=2.1e-25 Score=229.93 Aligned_cols=98 Identities=27% Similarity=0.405 Sum_probs=89.5
Q ss_pred hhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCC--CEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCc
Q psy18009 45 ILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAP--QIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRL 120 (277)
Q Consensus 45 vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p--~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l 120 (277)
.|..+|+. +.+++.+..|||||+|||+||++|+.+| ++|||||||++||+.+.+.|+++|++|++. +|+|+|+|++
T Consensus 362 ~L~~vGL~~l~l~r~~~tLSGGe~QRV~LA~aL~~~p~~~llILDEPT~~Ld~~~~~~L~~~l~~L~~~G~TVIvVeHdl 441 (842)
T 2vf7_A 362 VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKRGGNSLFVVEHDL 441 (842)
T ss_dssp HHHHTTCTTSBTTCBGGGSCHHHHHHHHHHHHTTTCCCSCEEEEECTTTTCCGGGHHHHHHHHHHHHTTTCEEEEECCCH
T ss_pred HHHhCCCCcCCccCCcCcCCHHHHHHHHHHHHHhhCCCCeEEEeeCccccCCHHHHHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 58889997 6689999999999999999999999999 599999999999999999999999999874 6899999999
Q ss_pred chhccCceEEEe------eCcEEEEecC
Q psy18009 121 STIIHADEILVM------HAGEIVERGS 142 (277)
Q Consensus 121 ~ev~~~Drv~vL------~dG~iv~~g~ 142 (277)
+.+..||+|++| ++|++++.|+
T Consensus 442 ~~l~~aD~ii~lgpgaG~~~G~iv~~g~ 469 (842)
T 2vf7_A 442 DVIRRADWLVDVGPEAGEKGGEILYSGP 469 (842)
T ss_dssp HHHTTCSEEEEECSSSGGGCCSEEEEEC
T ss_pred HHHHhCCEEEEeCCCcccCCCEEEEecC
Confidence 876669999999 7999987654
No 31
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=99.91 E-value=1.1e-24 Score=196.96 Aligned_cols=102 Identities=31% Similarity=0.525 Sum_probs=94.0
Q ss_pred HHhhcccCcccc-cCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCc
Q psy18009 43 RAILKNISFTVP-AGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~-~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l 120 (277)
.++|+.+++.-. .++++..|||||||||+|||||+.+|++|||||||++||+..++.+.++|+++++ +.|+|++||++
T Consensus 134 ~~~l~~~~L~~~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~ 213 (262)
T 1b0u_A 134 LKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEM 213 (262)
T ss_dssp HHHHHHTTCCHHHHTSCGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred HHHHHHcCCCchhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 357899999877 8999999999999999999999999999999999999999999999999999965 46899999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCce
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
+++.. |||+++|++|+++..|+..
T Consensus 214 ~~~~~~~d~v~~l~~G~i~~~g~~~ 238 (262)
T 1b0u_A 214 GFARHVSSHVIFLHQGKIEEEGDPE 238 (262)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHH
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99986 9999999999999887754
No 32
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=99.91 E-value=1.9e-24 Score=195.83 Aligned_cols=102 Identities=34% Similarity=0.501 Sum_probs=94.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.++|+++++ +.|+|++||+++
T Consensus 141 ~~~l~~~~L~~~~~~~~~~LSgGqkQRv~lAraL~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 220 (263)
T 2olj_A 141 MELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMG 220 (263)
T ss_dssp HHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHHCCCchHhcCChhhCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 3578999998888999999999999999999999999999999999999999999999999999965 458888999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCce
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++.. |||+++|++|+++..|+..
T Consensus 221 ~~~~~~d~v~~l~~G~i~~~g~~~ 244 (263)
T 2olj_A 221 FAREVGDRVLFMDGGYIIEEGKPE 244 (263)
T ss_dssp HHHHHCSEEEEEETTEEEEEECHH
T ss_pred HHHHhCCEEEEEECCEEEEECCHH
Confidence 9986 9999999999999877654
No 33
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=99.91 E-value=9.5e-25 Score=193.49 Aligned_cols=88 Identities=31% Similarity=0.513 Sum_probs=78.3
Q ss_pred CeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHH-HHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 57 KTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSA-LNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 57 ~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~-l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
+++..|||||||||+|||||+.+|++|||||||++||+..++.+++. ++++.++.|+|++||+++++..|||+++|++|
T Consensus 126 ~~~~~LSgGqkqrv~lAral~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~~~~~d~v~~l~~G 205 (229)
T 2pze_A 126 EGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEG 205 (229)
T ss_dssp TTCTTSCHHHHHHHHHHHHHHSCCSEEEEESTTTTSCHHHHHHHHHHCCCCCTTTSEEEEECCCHHHHHHCSEEEEEETT
T ss_pred CCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccCCCHHHHHHHHHHHHHHhhCCCEEEEEcCChHHHHhCCEEEEEECC
Confidence 34567999999999999999999999999999999999999999997 45665567899999999887669999999999
Q ss_pred EEEEecCce
Q psy18009 136 EIVERGSLF 144 (277)
Q Consensus 136 ~iv~~g~~~ 144 (277)
+++..|+..
T Consensus 206 ~i~~~g~~~ 214 (229)
T 2pze_A 206 SSYFYGTFS 214 (229)
T ss_dssp EEEEEECHH
T ss_pred EEEEECCHH
Confidence 999877653
No 34
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=99.91 E-value=1.5e-24 Score=193.93 Aligned_cols=102 Identities=39% Similarity=0.526 Sum_probs=94.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.|+++++ +.|+|++||++
T Consensus 108 ~~~l~~~~l~~~~~~~~~~LSgGqkqRv~lAral~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~~g~tvi~vtHd~ 187 (240)
T 2onk_A 108 REMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDL 187 (240)
T ss_dssp HHHHHTTTCTTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCH
T ss_pred HHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 4578999998778999999999999999999999999999999999999999999999999999864 56899999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCce
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
+++.. |||+++|++|+++..|+..
T Consensus 188 ~~~~~~~d~i~~l~~G~i~~~g~~~ 212 (240)
T 2onk_A 188 IEAAMLADEVAVMLNGRIVEKGKLK 212 (240)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHH
T ss_pred HHHHHhCCEEEEEECCEEEEECCHH
Confidence 99986 9999999999999877653
No 35
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=99.91 E-value=2.7e-24 Score=202.95 Aligned_cols=103 Identities=35% Similarity=0.521 Sum_probs=94.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHh-c-CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC-A-SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~-~-~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..+..+++.+.++. + +.|+|+|||++
T Consensus 120 ~~~l~~~gL~~~~~r~~~~LSGGq~QRValArAL~~~P~lLLLDEPts~LD~~~r~~l~~~l~~~~~~~g~tvi~vTHd~ 199 (359)
T 3fvq_A 120 EAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDR 199 (359)
T ss_dssp HHHHHHHTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCH
T ss_pred HHHHHHcCCchHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 357899999988999999999999999999999999999999999999999999999998887764 3 46888999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. ||||++|++|+++..|++..
T Consensus 200 ~ea~~~aDri~vl~~G~i~~~g~~~e 225 (359)
T 3fvq_A 200 EEALQYADRIAVMKQGRILQTASPHE 225 (359)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHCCEEEEEECCEEEEEeCHHH
Confidence 99986 99999999999999887654
No 36
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.91 E-value=3e-24 Score=191.54 Aligned_cols=100 Identities=23% Similarity=0.353 Sum_probs=91.4
Q ss_pred Hhhccc-CcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 44 AILKNI-SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 44 ~vL~~l-~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.+++.+ ++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.|+++++ +.|+|++||+++
T Consensus 121 ~~l~~~~~l~~~~~~~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd~~ 200 (240)
T 1ji0_A 121 WIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNAL 200 (240)
T ss_dssp HHHHHCHHHHTTTTSBSSSSCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred HHHHHcccHhhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH
Confidence 467777 487778999999999999999999999999999999999999999999999999999974 568999999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCc
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSL 143 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~ 143 (277)
++.. |||+++|++|+++..|+.
T Consensus 201 ~~~~~~d~v~~l~~G~i~~~g~~ 223 (240)
T 1ji0_A 201 GALKVAHYGYVLETGQIVLEGKA 223 (240)
T ss_dssp HHHHHCSEEEEEETTEEEEEEEH
T ss_pred HHHHhCCEEEEEECCEEEEEcCH
Confidence 9876 999999999999987764
No 37
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.90 E-value=4.6e-24 Score=192.58 Aligned_cols=102 Identities=25% Similarity=0.426 Sum_probs=93.6
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.++|+++++ +.|+|++||+++
T Consensus 128 ~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~ 207 (256)
T 1vpl_A 128 ERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNML 207 (256)
T ss_dssp HHHHHHHCCGGGGGSBGGGCCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred HHHHHHCCCchHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccccCHHHHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 3578889998778899999999999999999999999999999999999999999999999999975 468888999999
Q ss_pred hhcc-CceEEEeeCcEEEEecCce
Q psy18009 122 TIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++.. |||+++|++|+++..|+..
T Consensus 208 ~~~~~~d~v~~l~~G~i~~~g~~~ 231 (256)
T 1vpl_A 208 EVEFLCDRIALIHNGTIVETGTVE 231 (256)
T ss_dssp HHTTTCSEEEEEETTEEEEEEEHH
T ss_pred HHHHHCCEEEEEECCEEEEecCHH
Confidence 9987 9999999999999877653
No 38
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=99.90 E-value=4.9e-24 Score=194.60 Aligned_cols=102 Identities=32% Similarity=0.517 Sum_probs=94.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceE--EEEecC
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTT--IIVAHR 119 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~ti--IiIsH~ 119 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.++++|+++++ +.|+ |++||+
T Consensus 143 ~~~l~~~gl~~~~~~~~~~LSgGqkqRv~lAraL~~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tv~~iivtHd 222 (279)
T 2ihy_A 143 HQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHF 222 (279)
T ss_dssp HHHHHHTTCGGGTTSBGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHHHCCCEEEEEEEecC
Confidence 3578999998888999999999999999999999999999999999999999999999999999865 5688 999999
Q ss_pred cchhcc-CceEEEeeCcEEEEecCce
Q psy18009 120 LSTIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 120 l~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++++.. |||+++|++|+++..|+..
T Consensus 223 ~~~~~~~~d~v~~l~~G~i~~~g~~~ 248 (279)
T 2ihy_A 223 IEEITANFSKILLLKDGQSIQQGAVE 248 (279)
T ss_dssp GGGCCTTCCEEEEEETTEEEEEEEHH
T ss_pred HHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999986 9999999999999877653
No 39
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=99.90 E-value=7e-24 Score=191.97 Aligned_cols=102 Identities=27% Similarity=0.516 Sum_probs=93.6
Q ss_pred HHhhcccCcc--cccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecC
Q psy18009 43 RAILKNISFT--VPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHR 119 (277)
Q Consensus 43 ~~vL~~l~l~--i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~ 119 (277)
.++++.+++. -..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ +.|+|++||+
T Consensus 118 ~~~l~~~gl~~~~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tii~vtHd 197 (266)
T 2yz2_A 118 KKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHD 197 (266)
T ss_dssp HHHHHHTTCCHHHHTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred HHHHHHcCcCCcccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4578999998 778899999999999999999999999999999999999999999999999999964 5688899999
Q ss_pred cchhcc-CceEEEeeCcEEEEecCce
Q psy18009 120 LSTIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 120 l~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++++.. |||+++|++|+++..|+..
T Consensus 198 ~~~~~~~~d~v~~l~~G~i~~~g~~~ 223 (266)
T 2yz2_A 198 IETVINHVDRVVVLEKGKKVFDGTRM 223 (266)
T ss_dssp CTTTGGGCSEEEEEETTEEEEEEEHH
T ss_pred HHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999986 9999999999999877653
No 40
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=99.90 E-value=6.3e-24 Score=190.52 Aligned_cols=102 Identities=25% Similarity=0.379 Sum_probs=87.6
Q ss_pred HHhhcccCc-ccccCCeeec-cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecC
Q psy18009 43 RAILKNISF-TVPAGKTLAL-LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHR 119 (277)
Q Consensus 43 ~~vL~~l~l-~i~~~~~v~~-LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~ 119 (277)
.++|+.+++ .-..++++.. |||||||||+|||||+.+|++|||||||++||+.+++.+++.|+++++ +.|+|++||+
T Consensus 123 ~~~l~~~gl~~~~~~~~~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd 202 (250)
T 2d2e_A 123 KKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHY 202 (250)
T ss_dssp HHHHHHHTCCGGGGGSBTTCC----HHHHHHHHHHHHHCCSEEEEECGGGTTCHHHHHHHHHHHHHHCSTTCEEEEECSS
T ss_pred HHHHHHcCCChhHhcCCcccCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 357888898 4567888998 999999999999999999999999999999999999999999999965 4588889999
Q ss_pred cchhcc--CceEEEeeCcEEEEecCce
Q psy18009 120 LSTIIH--ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 120 l~ev~~--~Drv~vL~dG~iv~~g~~~ 144 (277)
++++.. |||+++|++|+++..|+..
T Consensus 203 ~~~~~~~~~d~v~~l~~G~i~~~g~~~ 229 (250)
T 2d2e_A 203 QRILNYIQPDKVHVMMDGRVVATGGPE 229 (250)
T ss_dssp SGGGGTSCCSEEEEEETTEEEEEESHH
T ss_pred HHHHHHhcCCEEEEEECCEEEEEeCHH
Confidence 999875 5999999999999877654
No 41
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=99.90 E-value=8.2e-24 Score=199.42 Aligned_cols=103 Identities=33% Similarity=0.533 Sum_probs=95.1
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 127 ~~~l~~~gL~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 206 (355)
T 1z47_A 127 RELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQ 206 (355)
T ss_dssp HHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTCCSSHHHHHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred HHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEECCCH
Confidence 3578999998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. |||+++|++|+++..|++..
T Consensus 207 ~~a~~~adri~vl~~G~i~~~g~~~~ 232 (355)
T 1z47_A 207 EEALEVADRVLVLHEGNVEQFGTPEE 232 (355)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99986 99999999999998887643
No 42
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.90 E-value=9.7e-24 Score=189.93 Aligned_cols=101 Identities=27% Similarity=0.400 Sum_probs=92.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++++.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ +.|+|++||++
T Consensus 110 ~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~ 189 (253)
T 2nq2_C 110 MQALDYLNLTHLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQP 189 (253)
T ss_dssp HHHHHHTTCGGGTTSBGGGSCHHHHHHHHHHHHHHTTCSEEEESSSSTTSCHHHHHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred HHHHHHcCChHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH
Confidence 3578899998788999999999999999999999999999999999999999999999999999965 45888899999
Q ss_pred chhcc-CceEEEeeCcEEEEecCce
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
+++.. |||+++|++|+ +..|+..
T Consensus 190 ~~~~~~~d~v~~l~~G~-~~~g~~~ 213 (253)
T 2nq2_C 190 NQVVAIANKTLLLNKQN-FKFGETR 213 (253)
T ss_dssp HHHHHHCSEEEEEETTE-EEEEEHH
T ss_pred HHHHHhCCEEEEEeCCe-EecCCHH
Confidence 99976 99999999999 8777643
No 43
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=99.90 E-value=1.1e-23 Score=198.84 Aligned_cols=103 Identities=28% Similarity=0.447 Sum_probs=95.2
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 115 ~~~l~~~~L~~~~~r~~~~LSgGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 194 (359)
T 2yyz_A 115 VEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQ 194 (359)
T ss_dssp HHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCH
T ss_pred HHHHHHcCCchHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH
Confidence 3578999998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. |||+++|++|+++..|++..
T Consensus 195 ~~~~~~adri~vl~~G~i~~~g~~~~ 220 (359)
T 2yyz_A 195 AEAMTMASRIAVFNQGKLVQYGTPDE 220 (359)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99986 99999999999999887654
No 44
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=99.90 E-value=7.7e-24 Score=199.42 Aligned_cols=103 Identities=30% Similarity=0.423 Sum_probs=95.1
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 122 ~~~l~~~~L~~~~~~~~~~LSGGq~QRvalAraL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 201 (353)
T 1oxx_K 122 EEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDP 201 (353)
T ss_dssp HHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCH
T ss_pred HHHHHHcCCchHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 3578999998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. |||+++|++|+++..|++..
T Consensus 202 ~~~~~~adri~vl~~G~i~~~g~~~~ 227 (353)
T 1oxx_K 202 ADIFAIADRVGVLVKGKLVQVGKPED 227 (353)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99986 99999999999998887644
No 45
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=99.90 E-value=1.2e-23 Score=191.10 Aligned_cols=100 Identities=34% Similarity=0.574 Sum_probs=89.2
Q ss_pred hccc--CcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 46 LKNI--SFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 46 L~~l--~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++.+ ++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.+++.|+++.+ +.|+|+|||+++
T Consensus 139 l~~l~~gl~~~~~~~~~~LSgGq~QRv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~~~g~tviivtHd~~ 218 (271)
T 2ixe_A 139 ISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDNATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLS 218 (271)
T ss_dssp HHHSTTGGGSBCCGGGTTSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHCTTTTTSEEEEECSCHH
T ss_pred HHhhhcchhhhhcCCcCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH
Confidence 4445 566667888999999999999999999999999999999999999999999999999864 568889999999
Q ss_pred hhccCceEEEeeCcEEEEecCcee
Q psy18009 122 TIIHADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 122 ev~~~Drv~vL~dG~iv~~g~~~~ 145 (277)
++..|||+++|++|+++..|+...
T Consensus 219 ~~~~~d~v~~l~~G~i~~~g~~~~ 242 (271)
T 2ixe_A 219 LAERAHHILFLKEGSVCEQGTHLQ 242 (271)
T ss_dssp HHTTCSEEEEEETTEEEEEECHHH
T ss_pred HHHhCCEEEEEECCEEEEECCHHH
Confidence 886799999999999998877543
No 46
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=99.90 E-value=1e-23 Score=198.24 Aligned_cols=103 Identities=32% Similarity=0.453 Sum_probs=95.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 109 ~~~l~~~~L~~~~~~~~~~LSgGq~QRvalAraL~~~P~lLLLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd~ 188 (348)
T 3d31_A 109 LDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQ 188 (348)
T ss_dssp HHHHHHTTCTTTTTSCGGGSCHHHHHHHHHHHHTTSCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred HHHHHHcCCchHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 4578999998888999999999999999999999999999999999999999999999999999854 46888999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. |||+++|++|+++..|++..
T Consensus 189 ~~~~~~adri~vl~~G~i~~~g~~~~ 214 (348)
T 3d31_A 189 TEARIMADRIAVVMDGKLIQVGKPEE 214 (348)
T ss_dssp HHHHHHCSEEEEESSSCEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99986 99999999999998887643
No 47
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=99.90 E-value=8.5e-24 Score=199.79 Aligned_cols=103 Identities=36% Similarity=0.501 Sum_probs=95.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 115 ~~~l~~~~L~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 194 (362)
T 2it1_A 115 REVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQ 194 (362)
T ss_dssp HHHHHHTTCTTCTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESGGGGSCHHHHHHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred HHHHHHcCCchHhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHHHhCCCEEEEECCCH
Confidence 3578999998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. ||||++|++|+++..|++..
T Consensus 195 ~~a~~~adri~vl~~G~i~~~g~~~~ 220 (362)
T 2it1_A 195 AEALAMADRIAVIREGEILQVGTPDE 220 (362)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99986 99999999999999887644
No 48
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=99.90 E-value=1.2e-23 Score=199.46 Aligned_cols=103 Identities=32% Similarity=0.472 Sum_probs=95.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 121 ~~~l~~~~L~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 200 (372)
T 1g29_1 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQ 200 (372)
T ss_dssp HHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred HHHHHHCCCchHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEECCCH
Confidence 3578899998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. |||+++|++|+++..|++..
T Consensus 201 ~~a~~~adri~vl~~G~i~~~g~~~~ 226 (372)
T 1g29_1 201 VEAMTMGDRIAVMNRGVLQQVGSPDE 226 (372)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 99986 99999999999999887643
No 49
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=99.89 E-value=1.3e-23 Score=218.05 Aligned_cols=98 Identities=28% Similarity=0.484 Sum_probs=89.3
Q ss_pred hhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCC--CEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCc
Q psy18009 45 ILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAP--QIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRL 120 (277)
Q Consensus 45 vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p--~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l 120 (277)
.|..+||. +.+++.+..|||||+|||+||++|..+| ++|||||||++||+.+.+.|+++|++|++. .|+|+|+|++
T Consensus 487 ~L~~vGL~~l~ldR~~~tLSGGEkQRV~LA~aL~~~~~~~llILDEPTagLdp~~~~~L~~~L~~Lr~~G~TVIvVeHdl 566 (972)
T 2r6f_A 487 FLQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGNTLIVVEHDE 566 (972)
T ss_dssp HHHHHTCTTSBSSSBGGGCCHHHHHHHHHHHHHTTCCCSCEEEEECTTTTCCGGGHHHHHHHHHHHHTTTCEEEEECCCH
T ss_pred HhhhCCCCccccCCccccCCHHHHHHHHHHHHHhhCCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHhCCCEEEEEecCH
Confidence 47888997 5689999999999999999999999984 999999999999999999999999999864 5899999999
Q ss_pred chhccCceEEEe------eCcEEEEecC
Q psy18009 121 STIIHADEILVM------HAGEIVERGS 142 (277)
Q Consensus 121 ~ev~~~Drv~vL------~dG~iv~~g~ 142 (277)
+++..||||++| ++|++++.|+
T Consensus 567 ~~i~~ADrIi~LgpgaG~~gG~iv~~G~ 594 (972)
T 2r6f_A 567 DTMLAADYLIDIGPGAGIHGGEVVAAGT 594 (972)
T ss_dssp HHHHSCSEEEEECSSSGGGCCSEEEEEC
T ss_pred HHHHhCCEEEEeCCCccCCCCEEEEecC
Confidence 987779999999 7999987664
No 50
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=99.89 E-value=2.2e-23 Score=188.93 Aligned_cols=102 Identities=25% Similarity=0.384 Sum_probs=90.6
Q ss_pred HHhhcccCcc-cccCCeee-ccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecC
Q psy18009 43 RAILKNISFT-VPAGKTLA-LLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHR 119 (277)
Q Consensus 43 ~~vL~~l~l~-i~~~~~v~-~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~ 119 (277)
.++|+.+++. ...++++. .|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ +.|+|++||+
T Consensus 144 ~~~l~~~gl~~~~~~~~~~~~LSgGq~QRv~iAraL~~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tviivtHd 223 (267)
T 2zu0_C 144 EEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHY 223 (267)
T ss_dssp HHHHHHTTCCTTTTTSBTTTTCCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHTTCCSSCEEEEECSS
T ss_pred HHHHHHcCCChhHhcCCcccCCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeeC
Confidence 3578888985 45677887 5999999999999999999999999999999999999999999999865 4588889999
Q ss_pred cchhcc--CceEEEeeCcEEEEecCce
Q psy18009 120 LSTIIH--ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 120 l~ev~~--~Drv~vL~dG~iv~~g~~~ 144 (277)
++++.. |||+++|++|+++..|+..
T Consensus 224 ~~~~~~~~~d~v~~l~~G~i~~~g~~~ 250 (267)
T 2zu0_C 224 QRILDYIKPDYVHVLYQGRIVKSGDFT 250 (267)
T ss_dssp GGGGGTSCCSEEEEEETTEEEEEECTT
T ss_pred HHHHHhhcCCEEEEEECCEEEEEcCHH
Confidence 999874 8999999999999877653
No 51
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=99.89 E-value=3.1e-23 Score=187.91 Aligned_cols=100 Identities=21% Similarity=0.242 Sum_probs=92.7
Q ss_pred HHhhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcc
Q psy18009 43 RAILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ 121 (277)
.++++.+++. -..++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ |+|++||+++
T Consensus 109 ~~~l~~~gl~~~~~~~~~~~LSgGqkqRv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~~~~--tviivtHd~~ 186 (263)
T 2pjz_A 109 LEMLKALKLGEEILRRKLYKLSAGQSVLVRTSLALASQPEIVGLDEPFENVDAARRHVISRYIKEYGK--EGILVTHELD 186 (263)
T ss_dssp HHHHHHTTCCGGGGGSBGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTTTCCHHHHHHHHHHHHHSCS--EEEEEESCGG
T ss_pred HHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCccccCHHHHHHHHHHHHHhcC--cEEEEEcCHH
Confidence 4578899998 778899999999999999999999999999999999999999999999999999865 9999999999
Q ss_pred hhcc-Cc-eEEEeeCcEEEEecCce
Q psy18009 122 TIIH-AD-EILVMHAGEIVERGSLF 144 (277)
Q Consensus 122 ev~~-~D-rv~vL~dG~iv~~g~~~ 144 (277)
++.. || |+++|++|+++..|+..
T Consensus 187 ~~~~~~d~~i~~l~~G~i~~~g~~~ 211 (263)
T 2pjz_A 187 MLNLYKEYKAYFLVGNRLQGPISVS 211 (263)
T ss_dssp GGGGCTTSEEEEEETTEEEEEEEHH
T ss_pred HHHHhcCceEEEEECCEEEEecCHH
Confidence 9976 99 99999999999887653
No 52
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=99.89 E-value=1.4e-23 Score=198.86 Aligned_cols=103 Identities=31% Similarity=0.459 Sum_probs=95.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++||||||||+||+..++.+.+.|+++.+ +.|+|++||++
T Consensus 123 ~~~l~~~~L~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~ 202 (372)
T 1v43_A 123 RWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQ 202 (372)
T ss_dssp HHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred HHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3578999998888999999999999999999999999999999999999999999999999999864 56889999999
Q ss_pred chhcc-CceEEEeeCcEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~~~~ 145 (277)
+++.. ||||++|++|+++..|++..
T Consensus 203 ~~a~~~adri~vl~~G~i~~~g~~~~ 228 (372)
T 1v43_A 203 VEAMTMGDRIAVMNRGQLLQIGSPTE 228 (372)
T ss_dssp HHHHHHCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99986 99999999999998887654
No 53
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=99.89 E-value=1.9e-23 Score=187.79 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=93.8
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCC-------EEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEE
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQ-------IVLLDEATSALDTKTERNIQSALNRVCA-SRTTI 114 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~-------ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiI 114 (277)
.++++.+++.-..++++..|||||||||+|||||+.+|+ +|||||||++||+..++.+.+.|+++++ +.|+|
T Consensus 108 ~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lAraL~~~p~~~~~~~~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi 187 (249)
T 2qi9_C 108 NDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALSQQGLAIV 187 (249)
T ss_dssp HHHHHHTTCGGGTTSBGGGCCHHHHHHHHHHHHHHHHCTTTCTTCCEEEESSTTTTCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCcCCCCCeEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 457899999888899999999999999999999999999 9999999999999999999999999964 56888
Q ss_pred EEecCcchhcc-CceEEEeeCcEEEEecCce
Q psy18009 115 IVAHRLSTIIH-ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 115 iIsH~l~ev~~-~Drv~vL~dG~iv~~g~~~ 144 (277)
++||+++++.. |||+++|++|+++..|+..
T Consensus 188 ivtHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 218 (249)
T 2qi9_C 188 MSSHDLNHTLRHAHRAWLLKGGKMLASGRRE 218 (249)
T ss_dssp EECSCHHHHHHHCSEEEEEETTEEEEEEEHH
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999975 9999999999999877653
No 54
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=99.89 E-value=2.6e-23 Score=216.01 Aligned_cols=98 Identities=28% Similarity=0.462 Sum_probs=88.7
Q ss_pred hhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCCC--EEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCc
Q psy18009 45 ILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAPQ--IVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRL 120 (277)
Q Consensus 45 vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p~--ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l 120 (277)
.|..+|+. ...++++..|||||||||+|||||+.+|+ +|||||||++||+.+.+.++++|+++++. .|+|+|||++
T Consensus 447 ~L~~vgL~~l~l~r~~~~LSGGe~QRv~LAraL~~~p~~~lllLDEPT~gLD~~~~~~l~~~L~~L~~~G~TvivVtHd~ 526 (916)
T 3pih_A 447 FLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDE 526 (916)
T ss_dssp HHHTTTCTTCBTTSBGGGCCHHHHHHHHHHHHHHTTCCSCEEEEECTTTTCCGGGHHHHHHHHHHTTTTTCEEEEECCCH
T ss_pred HHHHcCCccccccCCcccCCHHHHHHHHHHHHHhhCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 56678885 55789999999999999999999999877 99999999999999999999999999764 5888999999
Q ss_pred chhccCceEEEe------eCcEEEEecC
Q psy18009 121 STIIHADEILVM------HAGEIVERGS 142 (277)
Q Consensus 121 ~ev~~~Drv~vL------~dG~iv~~g~ 142 (277)
+.+..||||++| ++|++++.|+
T Consensus 527 ~~~~~aD~ii~lgpgag~~~G~iv~~G~ 554 (916)
T 3pih_A 527 EVIRNADHIIDIGPGGGTNGGRVVFQGT 554 (916)
T ss_dssp HHHHTCSEEEEEESSSGGGCSEEEEEEC
T ss_pred HHHHhCCEEEEEcCCcccCCCEEEEeec
Confidence 888779999999 8999997765
No 55
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=99.88 E-value=6e-23 Score=213.72 Aligned_cols=98 Identities=33% Similarity=0.511 Sum_probs=88.6
Q ss_pred hhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccC--CCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCc
Q psy18009 45 ILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKA--PQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRL 120 (277)
Q Consensus 45 vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~--p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l 120 (277)
.|..+|+. +.+++.+..|||||+|||+||++|.++ |++|||||||++||+.+.+.|+++|++|++ +.|+|+|+|++
T Consensus 504 ~L~~vGL~~l~l~r~~~tLSGGEkQRV~LA~aL~~~~~~~llILDEPTagLdp~~~~~L~~~L~~Lr~~G~TVIvVeHdl 583 (993)
T 2ygr_A 504 FLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDE 583 (993)
T ss_dssp HHHHHTGGGSCTTCBGGGCCHHHHHHHHHHHHHTTCCCSCEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCCH
T ss_pred HHhhCCCCccccCCCcccCCHHHHHHHHHHHHHhhCCCCcEEEEeCcccCCCHHHHHHHHHHHHHHHHcCCEEEEECCCH
Confidence 47888987 568999999999999999999999998 599999999999999999999999999976 45899999999
Q ss_pred chhccCceEEEe------eCcEEEEecC
Q psy18009 121 STIIHADEILVM------HAGEIVERGS 142 (277)
Q Consensus 121 ~ev~~~Drv~vL------~dG~iv~~g~ 142 (277)
+++..||||++| ++|++++.|+
T Consensus 584 ~~i~~ADrIi~Lgp~aG~~gG~iv~~G~ 611 (993)
T 2ygr_A 584 DTIEHADWIVDIGPGAGEHGGRIVHSGP 611 (993)
T ss_dssp HHHHTCSEEEEECSSSGGGCCSCCEEEC
T ss_pred HHHHhCCEEEEecCccccCCCEEEEeeC
Confidence 987679999999 7899886553
No 56
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.6e-21 Score=193.74 Aligned_cols=104 Identities=25% Similarity=0.311 Sum_probs=94.9
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
..+++.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+.++..++++|+++.. +.|+|+|||++
T Consensus 449 ~~~l~~l~l~~~~~~~~~~LSGGqkQRv~iAraL~~~p~lLlLDEPT~gLD~~~~~~i~~ll~~l~~~~g~tviivtHdl 528 (608)
T 3j16_B 449 TDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDF 528 (608)
T ss_dssp HHTHHHHTSTTTSSSBSSSCCHHHHHHHHHHHHTTSCCSEEEECCTTTTCCHHHHHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred HHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4578888998888999999999999999999999999999999999999999999999999999853 56899999999
Q ss_pred chhcc-CceEEEeeC--cEEEEecCceee
Q psy18009 121 STIIH-ADEILVMHA--GEIVERGSLFVS 146 (277)
Q Consensus 121 ~ev~~-~Drv~vL~d--G~iv~~g~~~~~ 146 (277)
+++.. ||||++|++ |+++..|++...
T Consensus 529 ~~~~~~aDrvivl~~~~g~~~~~g~p~~~ 557 (608)
T 3j16_B 529 IMATYLADKVIVFEGIPSKNAHARAPESL 557 (608)
T ss_dssp HHHHHHCSEEEECEEETTTEEECCCCEEH
T ss_pred HHHHHhCCEEEEEeCCCCeEEecCChHHH
Confidence 99987 999999986 889888887654
No 57
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=99.84 E-value=2.2e-21 Score=178.13 Aligned_cols=89 Identities=31% Similarity=0.532 Sum_probs=77.1
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHH-HHHHhcCceEEEEecCcchhccCceEEEeeC
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSA-LNRVCASRTTIIVAHRLSTIIHADEILVMHA 134 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~-l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~d 134 (277)
++.+..|||||||||+|||||+.+|++|||||||++||+..++.+++. ++++.++.|+|++||+++++..|||+++|++
T Consensus 154 ~~~~~~LSgGq~QRv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~ll~~~~~~~tviivtHd~~~~~~~d~i~~l~~ 233 (290)
T 2bbs_A 154 GEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHE 233 (290)
T ss_dssp ----CCCCHHHHHHHHHHHHHHSCCSEEEEESTTTTCCHHHHHHHHHHCCCCCTTTSEEEEECCCHHHHHHSSEEEEEET
T ss_pred cCccCcCCHHHHHHHHHHHHHHCCCCEEEEECCcccCCHHHHHHHHHHHHHHhhCCCEEEEEecCHHHHHcCCEEEEEEC
Confidence 345679999999999999999999999999999999999999999997 4556556789999999988766999999999
Q ss_pred cEEEEecCce
Q psy18009 135 GEIVERGSLF 144 (277)
Q Consensus 135 G~iv~~g~~~ 144 (277)
|+++..|+..
T Consensus 234 G~i~~~g~~~ 243 (290)
T 2bbs_A 234 GSSYFYGTFS 243 (290)
T ss_dssp TEEEEEECHH
T ss_pred CeEEEeCCHH
Confidence 9999887754
No 58
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=99.84 E-value=6.3e-21 Score=188.39 Aligned_cols=103 Identities=30% Similarity=0.421 Sum_probs=93.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..++.++++|+++.+ ++|+|+|||++
T Consensus 383 ~~~l~~~~l~~~~~~~~~~LSGGe~qrv~lAraL~~~p~lLlLDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vsHd~ 462 (538)
T 1yqt_A 383 TELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDV 462 (538)
T ss_dssp HHTTTTTTCGGGTTSBGGGCCHHHHHHHHHHHHHTSCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred HHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4578999998788999999999999999999999999999999999999999999999999999853 67999999999
Q ss_pred chhcc-CceEEEeeC--cEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHA--GEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~d--G~iv~~g~~~~ 145 (277)
+++.. ||||++|++ |+++..|++..
T Consensus 463 ~~~~~~~drv~vl~~~~~~~~~~g~~~~ 490 (538)
T 1yqt_A 463 LMIDYVSDRLMVFEGEPGKYGRALPPMG 490 (538)
T ss_dssp HHHHHHCSEEEEEEEETTTEEEECCCEE
T ss_pred HHHHHhCCEEEEEeCCcceEeecCCHHH
Confidence 99986 999999986 67777777644
No 59
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=99.84 E-value=6.5e-21 Score=188.39 Aligned_cols=101 Identities=30% Similarity=0.353 Sum_probs=89.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++++.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+.++..++++|+++.+ +.|+|+|||++
T Consensus 367 ~~~l~~~~l~~~~~~~~~~LSGGq~QRv~iAraL~~~p~lLlLDEPT~gLD~~~~~~i~~~l~~l~~~~g~tvi~vsHdl 446 (538)
T 3ozx_A 367 EEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDL 446 (538)
T ss_dssp HHTTTTTTGGGCTTSBGGGCCHHHHHHHHHHHHHHSCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred HHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4578889998889999999999999999999999999999999999999999999999999999964 46888999999
Q ss_pred chhcc-CceEEEeeC--cEEEEecCc
Q psy18009 121 STIIH-ADEILVMHA--GEIVERGSL 143 (277)
Q Consensus 121 ~ev~~-~Drv~vL~d--G~iv~~g~~ 143 (277)
+++.. ||||++|++ |.....+++
T Consensus 447 ~~~~~~aDri~vl~~~~~~~~~~~~~ 472 (538)
T 3ozx_A 447 SIHDYIADRIIVFKGEPEKAGLATSP 472 (538)
T ss_dssp HHHHHHCSEEEEEEEETTTEEEECCC
T ss_pred HHHHHhCCEEEEEeCCcceeccCCCh
Confidence 99987 999999986 334444433
No 60
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=99.84 E-value=1.1e-21 Score=172.72 Aligned_cols=93 Identities=22% Similarity=0.298 Sum_probs=82.0
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLS 121 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ 121 (277)
.++++.+++.-. ++++..|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+++++ +.|+|++||+++
T Consensus 116 ~~~l~~~gl~~~-~~~~~~LSgGqkqrv~laraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~ 194 (214)
T 1sgw_A 116 MDALESVEVLDL-KKKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREEL 194 (214)
T ss_dssp HHHHHHTTCCCT-TSBGGGSCHHHHHHHHHHHHTTSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCC
T ss_pred HHHHHHcCCCcC-CCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 457888999766 899999999999999999999999999999999999999999999999999864 468889999999
Q ss_pred hhcc-CceEEEeeCcEE
Q psy18009 122 TIIH-ADEILVMHAGEI 137 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~i 137 (277)
++.. |||++++ +|+|
T Consensus 195 ~~~~~~d~v~~~-~~~~ 210 (214)
T 1sgw_A 195 SYCDVNENLHKY-STKI 210 (214)
T ss_dssp TTSSEEEEGGGG-BC--
T ss_pred HHHHhCCEEEEe-CCcc
Confidence 9987 8887654 5554
No 61
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=99.83 E-value=1.2e-20 Score=190.33 Aligned_cols=102 Identities=29% Similarity=0.458 Sum_probs=89.7
Q ss_pred HhhcccCccc-ccCCeeeccCHHHHHHHHHHHHhccCC---CEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEec
Q psy18009 44 AILKNISFTV-PAGKTLALLSGGEKQRVAIARTLLKAP---QIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAH 118 (277)
Q Consensus 44 ~vL~~l~l~i-~~~~~v~~LSgGqrQrv~IAral~~~p---~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH 118 (277)
+.|..+++.. ..++++..|||||||||+|||||+.+| ++|||||||++||+.+...++++|+++++ +.|+|+|||
T Consensus 525 ~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iAraL~~~p~~p~llllDEPt~~LD~~~~~~i~~~l~~l~~~g~tvi~vtH 604 (670)
T 3ux8_A 525 ETLYDVGLGYMKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEH 604 (670)
T ss_dssp HHHHHTTCTTSBTTCCGGGCCHHHHHHHHHHHHHHSCCCSCEEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCchhhccCCchhCCHHHHHHHHHHHHHhhCCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3566677753 468899999999999999999999876 59999999999999999999999999975 468889999
Q ss_pred CcchhccCceEEEe------eCcEEEEecCcee
Q psy18009 119 RLSTIIHADEILVM------HAGEIVERGSLFV 145 (277)
Q Consensus 119 ~l~ev~~~Drv~vL------~dG~iv~~g~~~~ 145 (277)
+++++..||||++| ++|++++.|++..
T Consensus 605 d~~~~~~~d~i~~l~~~~g~~~G~i~~~g~~~~ 637 (670)
T 3ux8_A 605 NLDVIKTADYIIDLGPEGGDRGGQIVAVGTPEE 637 (670)
T ss_dssp CHHHHTTCSEEEEEESSSGGGCCEEEEEECHHH
T ss_pred CHHHHHhCCEEEEecCCcCCCCCEEEEecCHHH
Confidence 99987669999999 8999999988654
No 62
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=99.82 E-value=1.4e-20 Score=188.31 Aligned_cols=103 Identities=30% Similarity=0.412 Sum_probs=92.9
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.++|+.+++.-..++++..|||||||||+|||||+.+|++|||||||++||+..+..+.++|+++.+ +.|+|+|||++
T Consensus 453 ~~~l~~~~l~~~~~~~~~~LSGGe~QRv~iAraL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~ 532 (607)
T 3bk7_A 453 TELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDV 532 (607)
T ss_dssp HHTHHHHTCTTTTTSBGGGCCHHHHHHHHHHHHHTSCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred HHHHHHcCCchHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4578889998778999999999999999999999999999999999999999999999999999853 56899999999
Q ss_pred chhcc-CceEEEeeC--cEEEEecCcee
Q psy18009 121 STIIH-ADEILVMHA--GEIVERGSLFV 145 (277)
Q Consensus 121 ~ev~~-~Drv~vL~d--G~iv~~g~~~~ 145 (277)
+++.. |||+++|++ |+++..|++..
T Consensus 533 ~~~~~~adrv~vl~~~~g~~~~~g~p~~ 560 (607)
T 3bk7_A 533 LMIDYVSDRLIVFEGEPGRHGRALPPMG 560 (607)
T ss_dssp HHHHHHCSEEEEEEEETTTEEEECCCEE
T ss_pred HHHHHhCCEEEEEcCCcceEEecCCHHH
Confidence 99986 999999986 77777777654
No 63
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=99.82 E-value=3.2e-20 Score=192.90 Aligned_cols=103 Identities=32% Similarity=0.500 Sum_probs=92.4
Q ss_pred HhhcccCcc-cccCCeeeccCHHHHHHHHHHHHhccCC---CEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEec
Q psy18009 44 AILKNISFT-VPAGKTLALLSGGEKQRVAIARTLLKAP---QIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAH 118 (277)
Q Consensus 44 ~vL~~l~l~-i~~~~~v~~LSgGqrQrv~IAral~~~p---~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH 118 (277)
.+|+.+|+. ...++++..|||||||||+|||||+++| ++|||||||++||+.+.+.++++|+++.+ +.|+|+|||
T Consensus 787 ~~L~~vGL~~~~lgq~~~~LSGGErQRV~LAraL~~~p~~p~LLILDEPTsGLD~~~~~~L~~lL~~L~~~G~TVIvI~H 866 (916)
T 3pih_A 787 QVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEH 866 (916)
T ss_dssp HHHHHTTGGGSBTTCCSTTCCHHHHHHHHHHHHHTSCCCSSEEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCchhhccCCccCCCHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 467788885 4578999999999999999999999865 79999999999999999999999999975 568999999
Q ss_pred CcchhccCceEEEe------eCcEEEEecCceee
Q psy18009 119 RLSTIIHADEILVM------HAGEIVERGSLFVS 146 (277)
Q Consensus 119 ~l~ev~~~Drv~vL------~dG~iv~~g~~~~~ 146 (277)
+++++..||||++| ++|++++.|++...
T Consensus 867 dL~~i~~ADrIivLgp~gg~~~G~Iv~~Gtpeel 900 (916)
T 3pih_A 867 NLDVIKNADHIIDLGPEGGKEGGYIVATGTPEEI 900 (916)
T ss_dssp CHHHHTTCSEEEEEESSSGGGCCEEEEEESHHHH
T ss_pred CHHHHHhCCEEEEecCCCCCCCCEEEEEcCHHHH
Confidence 99998779999999 89999999987643
No 64
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=99.81 E-value=2.9e-20 Score=175.23 Aligned_cols=84 Identities=24% Similarity=0.337 Sum_probs=76.7
Q ss_pred CCeeeccCHHHHHHHHHHHHhc------cCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCcchhccCce
Q psy18009 56 GKTLALLSGGEKQRVAIARTLL------KAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRLSTIIHADE 128 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~------~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l~ev~~~Dr 128 (277)
++++..|||||||||+||+||+ .+|++|||||||++||+...+.+++.|+++.+. .|+|+|||+++.+..|||
T Consensus 274 ~~~~~~LSgGe~qr~~la~al~~~~~~~~~p~~lllDEpt~~LD~~~~~~~~~~l~~l~~~g~tvi~itH~~~~~~~~d~ 353 (365)
T 3qf7_A 274 ERPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDR 353 (365)
T ss_dssp EEEGGGSCHHHHHHHHHHHHHHHHHHTTTTCCEEEEESCCTTSCHHHHHHHHHHHHGGGGSSSEEEEEESCHHHHTTCSC
T ss_pred CCCchhCCHHHHHHHHHHHHHHhhhcccCCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCE
Confidence 4788899999999999999999 799999999999999999999999999999754 588899999998556999
Q ss_pred EEEeeCcEEEE
Q psy18009 129 ILVMHAGEIVE 139 (277)
Q Consensus 129 v~vL~dG~iv~ 139 (277)
+++|++|+++.
T Consensus 354 ~~~l~~G~i~~ 364 (365)
T 3qf7_A 354 KLRITGGVVVN 364 (365)
T ss_dssp EEEEETTEEC-
T ss_pred EEEEECCEEEe
Confidence 99999999874
No 65
>1f2t_B RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_B* 1us8_B*
Probab=99.81 E-value=8.1e-20 Score=152.20 Aligned_cols=82 Identities=27% Similarity=0.443 Sum_probs=71.9
Q ss_pred cCCeeeccCHHHHHHHHHH------HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcchhcc-C
Q psy18009 55 AGKTLALLSGGEKQRVAIA------RTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLSTIIH-A 126 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv~IA------ral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ev~~-~ 126 (277)
.++++..||||||||++|| |||+.+|++|||||||++||+...+.+.+.++++.+ +.++|++||++ ++.. |
T Consensus 51 ~~~~~~~LSgGe~qrv~lA~~Lalaral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~-~~~~~~ 129 (148)
T 1f2t_B 51 KERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE-ELKDAA 129 (148)
T ss_dssp EEECGGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCG-GGGGGC
T ss_pred ccCChhHCCHHHHHHHHHHhhhHHHHHHcCCCCEEEEECCCccCCHHHHHHHHHHHHHHHccCCEEEEEEChH-HHHHhC
Confidence 4567899999999999876 899999999999999999999999999999999865 56888999998 5555 9
Q ss_pred ceEEEe--eCcEE
Q psy18009 127 DEILVM--HAGEI 137 (277)
Q Consensus 127 Drv~vL--~dG~i 137 (277)
|++++| ++|..
T Consensus 130 d~ii~l~~~~g~s 142 (148)
T 1f2t_B 130 DHVIRISLENGSS 142 (148)
T ss_dssp SEEEEEEEETTEE
T ss_pred CEEEEEEcCCCeE
Confidence 999999 45543
No 66
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=99.78 E-value=3.1e-19 Score=184.09 Aligned_cols=102 Identities=26% Similarity=0.451 Sum_probs=91.5
Q ss_pred HhhcccCccc-ccCCeeeccCHHHHHHHHHHHHhccC---CCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEec
Q psy18009 44 AILKNISFTV-PAGKTLALLSGGEKQRVAIARTLLKA---PQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAH 118 (277)
Q Consensus 44 ~vL~~l~l~i-~~~~~v~~LSgGqrQrv~IAral~~~---p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH 118 (277)
.+|+.+++.- ..++++..|||||||||+||++|+.+ |++|||||||++||+...+.++++|+++.+ +.|+|+|||
T Consensus 712 ~~L~~~gL~~~~l~~~~~~LSGGekQRv~LAraL~~~p~~p~lLILDEPTsGLD~~~~~~l~~lL~~L~~~G~tVIvisH 791 (842)
T 2vf7_A 712 DTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEH 791 (842)
T ss_dssp HHHHHTTCTTSBTTCCGGGCCHHHHHHHHHHHTTSSCCSSCEEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCcccccCCcccCCHHHHHHHHHHHHHHhCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 4678888865 46899999999999999999999996 799999999999999999999999999975 568889999
Q ss_pred CcchhccCceEEEe------eCcEEEEecCcee
Q psy18009 119 RLSTIIHADEILVM------HAGEIVERGSLFV 145 (277)
Q Consensus 119 ~l~ev~~~Drv~vL------~dG~iv~~g~~~~ 145 (277)
+++++..||||++| ++|+++..|+...
T Consensus 792 dl~~i~~aDrii~L~p~~g~~~G~Iv~~g~~~e 824 (842)
T 2vf7_A 792 KMQVVAASDWVLDIGPGAGEDGGRLVAQGTPAE 824 (842)
T ss_dssp CHHHHTTCSEEEEECSSSGGGCCSEEEEECHHH
T ss_pred CHHHHHhCCEEEEECCCCCCCCCEEEEEcCHHH
Confidence 99999559999999 7999998887643
No 67
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=99.78 E-value=4.4e-19 Score=184.32 Aligned_cols=102 Identities=29% Similarity=0.458 Sum_probs=91.6
Q ss_pred HhhcccCccc-ccCCeeeccCHHHHHHHHHHHHhccCC---CEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEec
Q psy18009 44 AILKNISFTV-PAGKTLALLSGGEKQRVAIARTLLKAP---QIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAH 118 (277)
Q Consensus 44 ~vL~~l~l~i-~~~~~v~~LSgGqrQrv~IAral~~~p---~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH 118 (277)
.+|+.+++.- ..++++..|||||||||+||++|+.+| ++|||||||++||+.+.+.++++|+++.+ +.|+|+|||
T Consensus 827 ~~L~~~gL~~~~l~~~~~~LSGGekQRv~LAraL~~~p~~p~lLILDEPTsGLD~~~~~~l~~lL~~L~~~G~TVIvisH 906 (972)
T 2r6f_A 827 ETLYDVGLGYMKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEH 906 (972)
T ss_dssp HHHHHTTCSSSBTTCCGGGCCHHHHHHHHHHHHHSSCCCSCEEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCcccccCchhhCCHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 4688888875 688999999999999999999999865 99999999999999999999999999975 468889999
Q ss_pred CcchhccCceEEEe------eCcEEEEecCcee
Q psy18009 119 RLSTIIHADEILVM------HAGEIVERGSLFV 145 (277)
Q Consensus 119 ~l~ev~~~Drv~vL------~dG~iv~~g~~~~ 145 (277)
+++++..||||++| ++|+++..|++..
T Consensus 907 dl~~i~~aDrIivL~p~gG~~~G~Iv~~g~~~e 939 (972)
T 2r6f_A 907 NLDVIKTADYIIDLGPEGGDRGGQIVAVGTPEE 939 (972)
T ss_dssp CHHHHTTCSEEEEECSSSTTSCCSEEEEESHHH
T ss_pred CHHHHHhCCEEEEEcCCCCCCCCEEEEecCHHH
Confidence 99988669999999 7899998887643
No 68
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=99.77 E-value=7.1e-19 Score=183.22 Aligned_cols=102 Identities=29% Similarity=0.449 Sum_probs=91.7
Q ss_pred HhhcccCccc-ccCCeeeccCHHHHHHHHHHHHhccCC---CEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEec
Q psy18009 44 AILKNISFTV-PAGKTLALLSGGEKQRVAIARTLLKAP---QIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAH 118 (277)
Q Consensus 44 ~vL~~l~l~i-~~~~~v~~LSgGqrQrv~IAral~~~p---~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH 118 (277)
.+|+.+++.- ..++++..|||||||||+||++|+.+| ++|||||||++||+.+.+.+.++|+++.+ +.|+|+|||
T Consensus 845 ~~L~~lgL~~~~l~~~~~~LSGGekQRv~LAraL~~~p~~p~lLILDEPTsGLD~~~~~~l~~lL~~L~~~G~TVIvisH 924 (993)
T 2ygr_A 845 RTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEH 924 (993)
T ss_dssp HHHHHTTGGGSBTTCCGGGSCHHHHHHHHHHHHHSSCCCSSEEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCcccccCccccCCHHHHHHHHHHHHHHhCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 4678888875 679999999999999999999999865 99999999999999999999999999975 568889999
Q ss_pred CcchhccCceEEEe------eCcEEEEecCcee
Q psy18009 119 RLSTIIHADEILVM------HAGEIVERGSLFV 145 (277)
Q Consensus 119 ~l~ev~~~Drv~vL------~dG~iv~~g~~~~ 145 (277)
+++++..||||++| ++|+++..|+...
T Consensus 925 dl~~i~~aDrIivL~p~gg~~~G~Iv~~G~~~e 957 (993)
T 2ygr_A 925 NLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPED 957 (993)
T ss_dssp CHHHHTTCSEEEEEESSSTTSCSEEEEEECHHH
T ss_pred CHHHHHhCCEEEEECCCcCCCCCEEEEecCHHH
Confidence 99998669999999 6899999887653
No 69
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=99.77 E-value=1.4e-19 Score=188.87 Aligned_cols=98 Identities=21% Similarity=0.374 Sum_probs=85.9
Q ss_pred HHhhcccCcccc--cCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCc
Q psy18009 43 RAILKNISFTVP--AGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRL 120 (277)
Q Consensus 43 ~~vL~~l~l~i~--~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l 120 (277)
.++|+.+|+.-. .++++..|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++ ++++|+|||++
T Consensus 881 ~~~Le~lGL~~~~~~~~~~~~LSGGQkQRVaLArAL~~~P~LLLLDEPT~gLD~~s~~~L~~~L~~~--g~tVIiISHD~ 958 (986)
T 2iw3_A 881 EEHCSMLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEF--EGGVIIITHSA 958 (986)
T ss_dssp HHHHHHTTCCHHHHHHSCGGGCCHHHHHHHHHHHHHTTCCSEEEEECGGGTCCHHHHHHHHHHHHSC--SSEEEEECSCH
T ss_pred HHHHHHcCCCchhhcCCCccccCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHh--CCEEEEEECCH
Confidence 346888898632 57889999999999999999999999999999999999999999999988776 46999999999
Q ss_pred chhcc-CceEEEeeCcEEEEecC
Q psy18009 121 STIIH-ADEILVMHAGEIVERGS 142 (277)
Q Consensus 121 ~ev~~-~Drv~vL~dG~iv~~g~ 142 (277)
+++.. |||+++|++|+++..|+
T Consensus 959 e~v~~l~DrVivL~~G~Iv~~G~ 981 (986)
T 2iw3_A 959 EFTKNLTEEVWAVKDGRMTPSGH 981 (986)
T ss_dssp HHHTTTCCEEECCBTTBCCC---
T ss_pred HHHHHhCCEEEEEECCEEEEeCC
Confidence 99986 99999999999987664
No 70
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=99.74 E-value=4.7e-18 Score=160.60 Aligned_cols=83 Identities=23% Similarity=0.348 Sum_probs=75.1
Q ss_pred eeec-cCHHHHHHHHHHHHhccCC--CEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEe--
Q psy18009 58 TLAL-LSGGEKQRVAIARTLLKAP--QIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVM-- 132 (277)
Q Consensus 58 ~v~~-LSgGqrQrv~IAral~~~p--~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL-- 132 (277)
++.. |||||||||+||++|+.+| ++|||||||++||+...+.+.+.|+++.+++++|+|||+++.+..|||+++|
T Consensus 291 ~~~~~lSgGe~qrl~lA~~l~~~~~~~~LlLDEpt~~LD~~~~~~l~~~L~~l~~~~~vi~itH~~~~~~~~d~i~~l~k 370 (415)
T 4aby_A 291 PLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLADTRQVLVVTHLAQIAARAHHHYKVEK 370 (415)
T ss_dssp BGGGCSCHHHHHHHHHHHHHHHCCSSSEEEESSTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSCHHHHTTCSEEEEEEE
T ss_pred chhhhcCHhHHHHHHHHHHHHhCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHhhcCeEEEEEE
Confidence 4444 5999999999999999999 9999999999999999999999999998777999999999665459999999
Q ss_pred --eCcEEEEe
Q psy18009 133 --HAGEIVER 140 (277)
Q Consensus 133 --~dG~iv~~ 140 (277)
++|+++..
T Consensus 371 ~~~~G~~~~~ 380 (415)
T 4aby_A 371 QVEDGRTVSH 380 (415)
T ss_dssp EEETTEEEEE
T ss_pred eccCCceEEE
Confidence 99998764
No 71
>3kta_B Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xew_Y 1xex_B*
Probab=99.70 E-value=4.6e-17 Score=138.83 Aligned_cols=81 Identities=23% Similarity=0.343 Sum_probs=70.5
Q ss_pred CCeeeccCHHHHHHHHHHHHhcc----CCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEE
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLK----APQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILV 131 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~----~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~v 131 (277)
.+.+..||||||||++||++|+. +|+++||||||++||+.+...+.+.|+++.+++++|+|||+...+..||+++.
T Consensus 59 ~~~~~~LSgGekqr~ala~~la~~~~~~~~~llLDEp~a~LD~~~~~~~~~~l~~~~~~~~~ivith~~~~~~~ad~i~~ 138 (173)
T 3kta_B 59 VKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRDVMMANADKIIG 138 (173)
T ss_dssp CCCGGGCCHHHHHHHHHHHHHHHHHHSCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSCHHHHTTCSEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHhcccCCCCEEEECCCccCCCHHHHHHHHHHHHHhccCCEEEEEEecHHHHHhCCEEEE
Confidence 34678899999999999999974 46999999999999999999999999999877889999999766556999986
Q ss_pred e--eCcE
Q psy18009 132 M--HAGE 136 (277)
Q Consensus 132 L--~dG~ 136 (277)
+ ++|.
T Consensus 139 v~~~~g~ 145 (173)
T 3kta_B 139 VSMRDGV 145 (173)
T ss_dssp EEEETTE
T ss_pred EEecCCE
Confidence 5 4664
No 72
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.70 E-value=6.7e-17 Score=149.17 Aligned_cols=84 Identities=29% Similarity=0.381 Sum_probs=72.6
Q ss_pred cCCeeeccCHHHHHHHHHHHHhc----cCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceE-
Q psy18009 55 AGKTLALLSGGEKQRVAIARTLL----KAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEI- 129 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv~IAral~----~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv- 129 (277)
.+.++..||+|||||++||+||+ .+|++|||||||++||+...+.+++.++++.++.++|++||+++....||++
T Consensus 213 ~~~~~~~lS~Gq~q~v~ia~~l~~~~~~~~~~lllDEp~~~LD~~~~~~l~~~l~~~~~~~~vi~~tH~~~~~~~~d~~~ 292 (322)
T 1e69_A 213 RDQKLSLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLH 292 (322)
T ss_dssp CCCBGGGSCHHHHHHHHHHHHHHHTTTSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGGGGCSEEE
T ss_pred ccCchhhCCHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEECCHHHHhhCceEE
Confidence 45678899999999999999997 6899999999999999999999999999986666889999996533459987
Q ss_pred -EEeeCcEEE
Q psy18009 130 -LVMHAGEIV 138 (277)
Q Consensus 130 -~vL~dG~iv 138 (277)
++|.+|...
T Consensus 293 ~v~~~~g~s~ 302 (322)
T 1e69_A 293 GVTMVNGVSA 302 (322)
T ss_dssp EEEESSSCEE
T ss_pred EEEEeCCEEE
Confidence 788888654
No 73
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=99.66 E-value=6.5e-17 Score=158.40 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=73.8
Q ss_pred CCeeecc-CHHHHHHHHHHHHhccCC--CEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEe
Q psy18009 56 GKTLALL-SGGEKQRVAIARTLLKAP--QIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVM 132 (277)
Q Consensus 56 ~~~v~~L-SgGqrQrv~IAral~~~p--~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL 132 (277)
.+++..| ||||||||+||++|+.+| ++|||||||++||+.....+.+.|+++.++.++|+|||+++.+..|||+++|
T Consensus 391 ~~~~~~l~SgG~~qrv~la~~l~~~~~~~~lilDEp~~gld~~~~~~i~~~l~~~~~~~~vi~itH~~~~~~~~d~~~~~ 470 (517)
T 4ad8_A 391 LGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLADTRQVLVVTHLAQIAARAHHHYKV 470 (517)
T ss_dssp CCBSSSSSCSSHHHHHHHHHHHHHCCCSSEEEECSCSSSCCTHHHHHHHHHHHHHHHHSEEEEECCCHHHHHHSSEEEEE
T ss_pred cccHHhcCCHHHHHHHHHHHHHHhCCCCCEEEEeCCcCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEE
Confidence 3567888 999999999999999999 9999999999999999999999999998767899999998877669999999
Q ss_pred eCcE
Q psy18009 133 HAGE 136 (277)
Q Consensus 133 ~dG~ 136 (277)
.+|.
T Consensus 471 ~~~~ 474 (517)
T 4ad8_A 471 EKQV 474 (517)
T ss_dssp ECCE
T ss_pred eccc
Confidence 6653
No 74
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=99.63 E-value=5.9e-16 Score=143.90 Aligned_cols=79 Identities=28% Similarity=0.455 Sum_probs=68.3
Q ss_pred ccCCeeeccCHHHHH------HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcchhcc-
Q psy18009 54 PAGKTLALLSGGEKQ------RVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLSTIIH- 125 (277)
Q Consensus 54 ~~~~~v~~LSgGqrQ------rv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ev~~- 125 (277)
..++++..||||||| |+++|++++.+|++|||||||++||+..+..+.+.|+++.+ +.++|+|||+. ++..
T Consensus 241 ~~~~~~~~lS~G~~~~~~la~~l~~a~~l~~~p~~lllDEp~~~LD~~~~~~l~~~l~~~~~~~~~vi~~sH~~-~~~~~ 319 (339)
T 3qkt_A 241 GKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE-ELKDA 319 (339)
T ss_dssp TEEECGGGSCHHHHHHHHHHHHHHHHHHTTTTTCEEEEECCCTTCCHHHHHHHHHHHHHTGGGSSEEEEEESCG-GGGGG
T ss_pred cCcCChHHCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEEChH-HHHHh
Confidence 345677889999999 67788888889999999999999999999999999999865 45888899995 4554
Q ss_pred CceEEEee
Q psy18009 126 ADEILVMH 133 (277)
Q Consensus 126 ~Drv~vL~ 133 (277)
||++++|+
T Consensus 320 ~d~~~~l~ 327 (339)
T 3qkt_A 320 ADHVIRIS 327 (339)
T ss_dssp CSEEEEEE
T ss_pred CCEEEEEE
Confidence 99999986
No 75
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=99.62 E-value=6.4e-16 Score=145.72 Aligned_cols=84 Identities=21% Similarity=0.199 Sum_probs=75.1
Q ss_pred CCeee-ccCHHHHHHHHHHHHhc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc
Q psy18009 56 GKTLA-LLSGGEKQRVAIARTLL---------KAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH 125 (277)
Q Consensus 56 ~~~v~-~LSgGqrQrv~IAral~---------~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~ 125 (277)
+.++. .||+||||+++||++|+ .+|+||||||||++||+..++.+++.+.++. .++|++|| +++ .
T Consensus 259 ~~~~~~~lS~Gqqq~l~lA~~La~~~l~~~~~~~p~iLLLDEp~s~LD~~~~~~l~~~l~~~~--qt~i~~th-~~~--~ 333 (359)
T 2o5v_A 259 DFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASVP--QAIVTGTE-LAP--G 333 (359)
T ss_dssp TEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEECCGGGCCCHHHHHHHHHHHHHSS--EEEEEESS-CCT--T
T ss_pred CcchhhhCCHHHHHHHHHHHHHHHhhhhhhccCCCCEEEEeCccccCCHHHHHHHHHHHHhcC--cEEEEEEe-ccc--c
Confidence 55666 79999999999999999 8999999999999999999999999999875 57777999 555 8
Q ss_pred CceEEEeeCcEEEEecCce
Q psy18009 126 ADEILVMHAGEIVERGSLF 144 (277)
Q Consensus 126 ~Drv~vL~dG~iv~~g~~~ 144 (277)
||++++|++|+++..|++.
T Consensus 334 ~~~i~~l~~G~i~~~g~~~ 352 (359)
T 2o5v_A 334 AALTLRAQAGRFTPVADEE 352 (359)
T ss_dssp CSEEEEEETTEEEECCCTT
T ss_pred CCEEEEEECCEEEecCCHH
Confidence 9999999999999887754
No 76
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=99.51 E-value=3.6e-14 Score=133.38 Aligned_cols=77 Identities=31% Similarity=0.437 Sum_probs=68.1
Q ss_pred CeeeccCHHHHHHH------HHHHHhccC-CCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc-Cce
Q psy18009 57 KTLALLSGGEKQRV------AIARTLLKA-PQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH-ADE 128 (277)
Q Consensus 57 ~~v~~LSgGqrQrv------~IAral~~~-p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~-~Dr 128 (277)
.++..|||||+||+ ++|++++.+ |++|||||||++||+...+.+.+.|.++.+.+++|++||+.+ +.. ||+
T Consensus 276 ~~~~~lS~G~~~~~~lal~la~a~~l~~~~~~~lllDEp~~~LD~~~~~~l~~~l~~~~~~~~vi~~th~~~-~~~~~d~ 354 (371)
T 3auy_A 276 LTIDNLSGGEQIAVALSLRLAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKVKSIPQMIIITHHRE-LEDVADV 354 (371)
T ss_dssp ECGGGSCHHHHHHHHHHHHHHHHHHHHSSCCSEEEEESTTTTCCHHHHHHHHHHHHHCCSCSEEEEEESCGG-GGGGCSE
T ss_pred cchHhcCHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCCHHHHHHHHHHHHHhccCCeEEEEEChHH-HHhhCCE
Confidence 45678999999988 567899999 999999999999999999999999999866678899999986 554 999
Q ss_pred EEEeeC
Q psy18009 129 ILVMHA 134 (277)
Q Consensus 129 v~vL~d 134 (277)
+++|++
T Consensus 355 ~~~l~k 360 (371)
T 3auy_A 355 IINVKK 360 (371)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999973
No 77
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.4e-15 Score=147.66 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=80.3
Q ss_pred HHhhcccCcccccCCeeeccCHHHHHHHHHHHH--hccCCCE----EEEec-CCCCCCHHHHHHHHHHHHHHhcCceEEE
Q psy18009 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIART--LLKAPQI----VLLDE-ATSALDTKTERNIQSALNRVCASRTTII 115 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAra--l~~~p~i----lILDE-PTa~LD~~~~~~l~~~l~~l~~~~tiIi 115 (277)
.++++.+|+.-..+ +..|||||||||+|||| |+.+|++ ||||| ||++||+. .+.+.++++++ +.++|+
T Consensus 219 ~~ll~~~gl~~~~~--~~~LSgGq~qrlalAra~rL~~~p~i~~sGLlLDEpPts~LD~~-~~~l~~l~~~~--~~tvii 293 (460)
T 2npi_A 219 QPMVKNFGLERINE--NKDLYLECISQLGQVVGQRLHLDPQVRRSGCIVDTPSISQLDEN-LAELHHIIEKL--NVNIML 293 (460)
T ss_dssp CCEECCCCSSSGGG--CHHHHHHHHHHHHHHHHHHHHHCHHHHHSCEEEECCCGGGSCSS-CHHHHHHHHHT--TCCEEE
T ss_pred HHHHHHhCCCcccc--hhhhhHHHHHHHHHHHHHHhccCcccCcceEEEeCCcccccChh-HHHHHHHHHHh--CCCEEE
Confidence 35677888864443 78999999999999999 9999999 99999 99999999 66677766664 457889
Q ss_pred EecCcc------hhcc-Cce-----EEEee-CcEEEEecCce
Q psy18009 116 VAHRLS------TIIH-ADE-----ILVMH-AGEIVERGSLF 144 (277)
Q Consensus 116 IsH~l~------ev~~-~Dr-----v~vL~-dG~iv~~g~~~ 144 (277)
|+|+.+ ++.. ||| |++|+ +|+++ .++..
T Consensus 294 Vth~~~~~l~~~~~~~~~dr~~~~~vi~l~k~G~iv-~g~~~ 334 (460)
T 2npi_A 294 VLCSETDPLWEKVKKTFGPELGNNNIFFIPKLDGVS-AVDDV 334 (460)
T ss_dssp EECCSSCTHHHHHHHHHHHHHCGGGEEEECCCTTCC-CCCHH
T ss_pred EEccCchhhhHHHHHHhcccccCCEEEEEeCCCcEE-ECCHH
Confidence 999988 6665 999 99999 99998 77653
No 78
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=99.51 E-value=1.3e-15 Score=128.15 Aligned_cols=70 Identities=6% Similarity=0.089 Sum_probs=61.2
Q ss_pred eccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHH----------------HHHHHHHHHHHHhc-CceEEEEecCcch
Q psy18009 60 ALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTK----------------TERNIQSALNRVCA-SRTTIIVAHRLST 122 (277)
Q Consensus 60 ~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~----------------~~~~l~~~l~~l~~-~~tiIiIsH~l~e 122 (277)
...|+|||||++||||++.+|++|+|||||++||+. ..+.+.+.++++++ +.|+|++||++++
T Consensus 82 ~~~s~g~~qrv~iAral~~~p~~lllDEPt~~Ld~~~~~R~~~~~~~~vi~~~~~~l~~~l~~l~~~g~tvi~vtH~~~~ 161 (171)
T 4gp7_A 82 NVQESARKPLIEMAKDYHCFPVAVVFNLPEKVCQERNKNRTDRQVEEYVIRKHTQQMKKSIKGLQREGFRYVYILNSPEE 161 (171)
T ss_dssp CCSHHHHHHHHHHHHHTTCEEEEEEECCCHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHSTTHHHHTCSEEEEECSHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeCCHHHHHHHHhcccCCCCCHHHHHHHHHHhhhhhhhHHhcCCcEEEEeCCHHH
Confidence 456999999999999999999999999999999999 56888999888754 5589999999999
Q ss_pred hccCceE
Q psy18009 123 IIHADEI 129 (277)
Q Consensus 123 v~~~Drv 129 (277)
+..++++
T Consensus 162 ~~~~~~~ 168 (171)
T 4gp7_A 162 VEEVVFE 168 (171)
T ss_dssp HHHEEEE
T ss_pred hhhhhhc
Confidence 8765553
No 79
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=99.48 E-value=6.8e-14 Score=133.71 Aligned_cols=77 Identities=25% Similarity=0.357 Sum_probs=67.7
Q ss_pred CeeeccCHHHHHHHHHHHHhc----cCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc-CceEEEEecCcchhccCceEEE
Q psy18009 57 KTLALLSGGEKQRVAIARTLL----KAPQIVLLDEATSALDTKTERNIQSALNRVCA-SRTTIIVAHRLSTIIHADEILV 131 (277)
Q Consensus 57 ~~v~~LSgGqrQrv~IAral~----~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ev~~~Drv~v 131 (277)
+++..|||||||+++||++|+ .+|+++||||||++||+..+..+.+.|+++.. +.++|+|||+...+..||++++
T Consensus 329 ~~~~~lS~Gq~~~~~la~~la~~~~~~~~~lllDEp~~~LD~~~~~~l~~~l~~~~~~~~~~ii~th~~~~~~~~d~~~~ 408 (430)
T 1w1w_A 329 KDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVG 408 (430)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHHHTSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHHHHTTCSEEEE
T ss_pred cccccCCcchHHHHHHHHHHHHhcCCCCCEEEeCCCcccCCHHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEE
Confidence 345679999999999999999 58999999999999999999999999999865 4588899999654445999999
Q ss_pred ee
Q psy18009 132 MH 133 (277)
Q Consensus 132 L~ 133 (277)
+.
T Consensus 409 ~~ 410 (430)
T 1w1w_A 409 VY 410 (430)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 80
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=99.48 E-value=3.4e-14 Score=121.03 Aligned_cols=80 Identities=9% Similarity=0.087 Sum_probs=66.5
Q ss_pred ccCCeeeccCHHHHHHHHHHHH-----hccCCCEEEEec--CCCCCCHHHHHHHHHHHHHHhcCceEEEEec---Ccchh
Q psy18009 54 PAGKTLALLSGGEKQRVAIART-----LLKAPQIVLLDE--ATSALDTKTERNIQSALNRVCASRTTIIVAH---RLSTI 123 (277)
Q Consensus 54 ~~~~~v~~LSgGqrQrv~IAra-----l~~~p~ilILDE--PTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH---~l~ev 123 (277)
..++++..||||||||++||+| ++.+|++||||| ||++||+...+.+.+.+++ .+.++|+++| +++.+
T Consensus 69 ~~~~~~~~lSgG~~qr~~la~aa~~~~l~~~p~llilDEigp~~~ld~~~~~~l~~~l~~--~~~~~i~~~H~~h~~~~~ 146 (178)
T 1ye8_A 69 LVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHD--PNVNVVATIPIRDVHPLV 146 (178)
T ss_dssp EETTEEECHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCCSTTGGGCHHHHHHHHHHHTC--TTSEEEEECCSSCCSHHH
T ss_pred cccccccCcCHHHHHHHHHHhhccccccccCCCEEEEeCCCCcccCCHHHHHHHHHHHhc--CCCeEEEEEccCCCchHH
Confidence 3577888999999999999996 999999999999 9999999999999888876 3446778775 77777
Q ss_pred cc-CceEEEeeCcEEEE
Q psy18009 124 IH-ADEILVMHAGEIVE 139 (277)
Q Consensus 124 ~~-~Drv~vL~dG~iv~ 139 (277)
.. ||| .+|+++.
T Consensus 147 ~~i~~r----~~~~i~~ 159 (178)
T 1ye8_A 147 KEIRRL----PGAVLIE 159 (178)
T ss_dssp HHHHTC----TTCEEEE
T ss_pred HHHHhc----CCcEEEE
Confidence 76 887 4566654
No 81
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=99.44 E-value=4.9e-13 Score=118.56 Aligned_cols=86 Identities=23% Similarity=0.288 Sum_probs=65.3
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHH----HhcceEEEcCCchhh-HHhHHHH------hh--ccc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQAS----LRQAIGVVPQDTVLF-NNSIKAI------QK--NFV 216 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~----~~~~i~~vpqd~~~~-n~~~~~~------~~--~~~ 216 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...+... .+++|+||||++.++ +.|+... .. ...
T Consensus 37 iG~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~enl~~~~~~~~~~~~ 116 (235)
T 3tif_A 37 MGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAM 116 (235)
T ss_dssp ECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSCHHHHHHHHHHTCSSSCC
T ss_pred ECCCCCcHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHhhccEEEEecCCccCCCCcHHHHHHHHHHhhhccCC
Confidence 7999999999999999999999999999999998766443 245699999996433 2344321 11 134
Q ss_pred ChHHHHHHHHHHHHhcCCC
Q psy18009 217 DMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 217 ~~~~~~~~~~~~~~~l~I~ 235 (277)
+.....+.+.++++.+++.
T Consensus 117 ~~~~~~~~~~~~l~~~~l~ 135 (235)
T 3tif_A 117 SGEERRKRALECLKMAELE 135 (235)
T ss_dssp CHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHCCCC
Confidence 5556677888999999885
No 82
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=99.41 E-value=1.1e-12 Score=115.32 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=63.5
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHH---HHh-cceEEEcCCchhh-HHhHHHHhh-----cccChH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQA---SLR-QAIGVVPQDTVLF-NNSIKAIQK-----NFVDME 219 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~---~~~-~~i~~vpqd~~~~-n~~~~~~~~-----~~~~~~ 219 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...+.. .++ ++|+||||++.++ +.|+...-. .-.+.+
T Consensus 36 iG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~ 115 (224)
T 2pcj_A 36 IGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKK 115 (224)
T ss_dssp EECTTSCHHHHHHHHTTSSCCSEEEEEETTEECCSSCHHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTTCCHH
T ss_pred ECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHHHHhCcEEEEecCcccCCCCCHHHHHHhHHHHcCCCHH
Confidence 799999999999999999999999999999998765532 233 6799999986333 334432211 012334
Q ss_pred HHHHHHHHHHHhcCCC
Q psy18009 220 NMFDLLQETCDVIDIP 235 (277)
Q Consensus 220 ~~~~~~~~~~~~l~I~ 235 (277)
...+.+.++++.+++.
T Consensus 116 ~~~~~~~~~l~~~~l~ 131 (224)
T 2pcj_A 116 EAKERGEYLLSELGLG 131 (224)
T ss_dssp HHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHcCCc
Confidence 4567788999999985
No 83
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=99.41 E-value=1e-12 Score=118.63 Aligned_cols=86 Identities=29% Similarity=0.382 Sum_probs=63.3
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEecc--CCcHHHHhcceEEEcCCchhh-HHhHHHH-hh---c--ccChHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK--TVSQASLRQAIGVVPQDTVLF-NNSIKAI-QK---N--FVDMEN 220 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~--~~~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~---~--~~~~~~ 220 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++. ......+++.|+||||++.++ +.|+... .. . -.+.+.
T Consensus 56 iG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~ 135 (263)
T 2olj_A 56 IGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREK 135 (263)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSEEEEEETTEESSSTTCCHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTSCCCHHH
T ss_pred EcCCCCcHHHHHHHHHcCCCCCCcEEEECCEECCCccccHHHHhCcEEEEeCCCcCCCCCCHHHHHHHHHHHHcCCCHHH
Confidence 7999999999999999999999999999999985 223445567799999996433 2344322 11 1 123444
Q ss_pred HHHHHHHHHHhcCCC
Q psy18009 221 MFDLLQETCDVIDIP 235 (277)
Q Consensus 221 ~~~~~~~~~~~l~I~ 235 (277)
..+.++++++.+++.
T Consensus 136 ~~~~~~~~l~~~~L~ 150 (263)
T 2olj_A 136 AEAKAMELLDKVGLK 150 (263)
T ss_dssp HHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHCCCc
Confidence 466788999999884
No 84
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=99.41 E-value=7.1e-13 Score=118.95 Aligned_cols=86 Identities=17% Similarity=0.306 Sum_probs=65.4
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH-HHHhcceEEEcCCchhh-HHhHHHH-hhc--c---------
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ-ASLRQAIGVVPQDTVLF-NNSIKAI-QKN--F--------- 215 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~vpqd~~~~-n~~~~~~-~~~--~--------- 215 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...+. ...+++|+||||++.++ +.|+... ..+ .
T Consensus 39 iG~nGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~ 118 (257)
T 1g6h_A 39 IGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSL 118 (257)
T ss_dssp ECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHTEEECCCCCGGGGGSBHHHHHHGGGTSTTSCHHHHH
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEEEccCCccCCCCcHHHHHHHHHhhhccCccccc
Confidence 79999999999999999999999999999999876553 34567899999997544 4566432 111 0
Q ss_pred ------cChHHHHHHHHHHHHhcCCC
Q psy18009 216 ------VDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 216 ------~~~~~~~~~~~~~~~~l~I~ 235 (277)
.+....++.++++++.+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~~l~ 144 (257)
T 1g6h_A 119 FYKKWIPKEEEMVEKAFKILEFLKLS 144 (257)
T ss_dssp HHCSSCCCCHHHHHHHHHHHHHTTCG
T ss_pred ccccccCCHHHHHHHHHHHHHHcCCc
Confidence 23344567788999999884
No 85
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=99.41 E-value=3.1e-13 Score=122.39 Aligned_cols=61 Identities=30% Similarity=0.570 Sum_probs=53.4
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...+...+++.|+||||++.+++.|+..
T Consensus 51 ~G~nGsGKSTLlk~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~e 111 (271)
T 2ixe_A 51 VGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRE 111 (271)
T ss_dssp ECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHH
T ss_pred ECCCCCCHHHHHHHHhcCCCCCCCEEEECCEEcccCCHHHHhccEEEEecCCccccccHHH
Confidence 7999999999999999999999999999999997666666677899999998766666654
No 86
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.40 E-value=1.6e-12 Score=117.00 Aligned_cols=85 Identities=16% Similarity=0.326 Sum_probs=63.1
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHhh----c-ccChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQK----N-FVDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~~----~-~~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++.. .....++.|+||||++.++ +.|+...-. . -...+..++
T Consensus 47 ~G~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~~-~~~~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~~~~~~~~~~ 125 (256)
T 1vpl_A 47 IGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVE-EPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEE 125 (256)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTT-CHHHHHTTEEEECTTCCCCTTSBHHHHHHHHHHHHCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCc-cHHHHhhcEEEEcCCCCCCCCCcHHHHHHHHHHHcCCChHHHHH
Confidence 79999999999999999999999999999999865 3445677899999996433 334432211 0 123344456
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.+.++++.+++.
T Consensus 126 ~~~~~l~~~gL~ 137 (256)
T 1vpl_A 126 MVERATEIAGLG 137 (256)
T ss_dssp HHHHHHHHHCCG
T ss_pred HHHHHHHHCCCc
Confidence 788899999884
No 87
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.38 E-value=1.6e-12 Score=115.57 Aligned_cols=85 Identities=21% Similarity=0.329 Sum_probs=62.5
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHH-HhcceEEEcCCchhh-HHhHHHHhh-c---ccChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQAS-LRQAIGVVPQDTVLF-NNSIKAIQK-N---FVDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~-~~~~i~~vpqd~~~~-n~~~~~~~~-~---~~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...+... .+++|+||||++.++ +.|+...-. + ..+.....+
T Consensus 38 ~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~~~~~~~~~ 117 (240)
T 1ji0_A 38 IGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKR 117 (240)
T ss_dssp ECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHHHHHHGGGTTCCCSSHHHH
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCHHHHHhCCEEEEecCCccCCCCcHHHHHHHhhhcCCCHHHHHH
Confidence 7999999999999999999999999999999987666443 456799999997443 346543211 1 123334456
Q ss_pred HHHHHHHhcC-C
Q psy18009 224 LLQETCDVID-I 234 (277)
Q Consensus 224 ~~~~~~~~l~-I 234 (277)
.++++++.++ +
T Consensus 118 ~~~~~l~~~~~l 129 (240)
T 1ji0_A 118 DLEWIFSLFPRL 129 (240)
T ss_dssp HHHHHHHHCHHH
T ss_pred HHHHHHHHcccH
Confidence 6777888774 5
No 88
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=99.37 E-value=3e-12 Score=115.35 Aligned_cols=86 Identities=22% Similarity=0.274 Sum_probs=62.4
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccC----------CcH---HHHhcceEEEcCCchhh-HHhHHHH-hh-
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT----------VSQ---ASLRQAIGVVPQDTVLF-NNSIKAI-QK- 213 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~----------~~~---~~~~~~i~~vpqd~~~~-n~~~~~~-~~- 213 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++.. .+. ..++++|+||||++.++ +.|+... ..
T Consensus 38 iG~nGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~Q~~~l~~~ltv~e~l~~~ 117 (262)
T 1b0u_A 38 IGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEA 117 (262)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEESCHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEccccccccccccccChhhHHHHhcceEEEecCcccCCCCcHHHHHHhh
Confidence 79999999999999999999999999999998851 222 34567799999995332 2344321 11
Q ss_pred ----cccChHHHHHHHHHHHHhcCCC
Q psy18009 214 ----NFVDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 214 ----~~~~~~~~~~~~~~~~~~l~I~ 235 (277)
.-.+.+..++.+.++++.+++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~l~~~~L~ 143 (262)
T 1b0u_A 118 PIQVLGLSKHDARERALKYLAKVGID 143 (262)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHcCCC
Confidence 1123444567788999999884
No 89
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=99.36 E-value=1e-12 Score=118.50 Aligned_cols=83 Identities=22% Similarity=0.420 Sum_probs=63.3
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc--hhhHHhHHHHhh-c---ccChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT--VLFNNSIKAIQK-N---FVDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~--~~~n~~~~~~~~-~---~~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++.. . .+++.|+||||++ .+++.|+...-. . .......++
T Consensus 39 iG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~~~~~--~-~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~ 115 (266)
T 2yz2_A 39 AGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKG--Y-EIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVP 115 (266)
T ss_dssp ECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECCH--H-HHGGGEEEECSSGGGGCCCSSHHHHHHHTTTTTCTTSCSHH
T ss_pred ECCCCCcHHHHHHHHhCCCCCCCcEEEECCEECch--H-HhhhhEEEEeccchhhcCCCcHHHHHHHHHHhcCCHHHHHH
Confidence 79999999999999999999999999999998753 2 5567899999995 456666654321 1 123333356
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.+.++++.+++.
T Consensus 116 ~~~~~l~~~gl~ 127 (266)
T 2yz2_A 116 LVKKAMEFVGLD 127 (266)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCcC
Confidence 788899998874
No 90
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=99.35 E-value=1.9e-12 Score=117.82 Aligned_cols=86 Identities=19% Similarity=0.295 Sum_probs=63.9
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEecc--CCcHHHHhcceEEEcCCchh-hH--HhHHHH-hhc------c--
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK--TVSQASLRQAIGVVPQDTVL-FN--NSIKAI-QKN------F-- 215 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~--~~~~~~~~~~i~~vpqd~~~-~n--~~~~~~-~~~------~-- 215 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++. ..+...++++|+||||++.+ ++ .|+... ..+ +
T Consensus 53 iG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~~i~~v~Q~~~~~~~~~ltv~enl~~~~~~~~~~~~ 132 (279)
T 2ihy_A 53 YGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQ 132 (279)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSEEEEEETTBCCC---CCHHHHHTTEEEECHHHHTTSCTTSBHHHHHHTTC--------
T ss_pred ECCCCCcHHHHHHHHhCCCCCCCeEEEECCEEcccccCCHHHHcCcEEEEEcCcccccCCCCCHHHHHHhhhhhcccccc
Confidence 7999999999999999999999999999999886 55555667889999999642 33 265432 111 1
Q ss_pred cChHHHHHHHHHHHHhcCCC
Q psy18009 216 VDMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~I~ 235 (277)
...+...+.+.++++.+++.
T Consensus 133 ~~~~~~~~~~~~~l~~~gl~ 152 (279)
T 2ihy_A 133 DIDDEIRNEAHQLLKLVGMS 152 (279)
T ss_dssp -CCHHHHHHHHHHHHHTTCG
T ss_pred CCcHHHHHHHHHHHHHcCCh
Confidence 11234456788899999884
No 91
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=99.35 E-value=1.3e-12 Score=123.13 Aligned_cols=86 Identities=22% Similarity=0.330 Sum_probs=66.1
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCC--cHHHHhcceEEEcCCchhh-HHhHHHH-hhc----ccChHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTV--SQASLRQAIGVVPQDTVLF-NNSIKAI-QKN----FVDMENM 221 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~~----~~~~~~~ 221 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++... .....+++||||||++.+| +.|+... ..+ ....+..
T Consensus 36 lGpsGsGKSTLLr~iaGl~~p~~G~I~i~G~~i~~~~~~~~~~~r~ig~vfQ~~~l~p~ltV~eni~~~l~~~~~~~~~~ 115 (359)
T 3fvq_A 36 IGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLGNGKGRTAQE 115 (359)
T ss_dssp EESTTSSHHHHHHHHHTSSCCSEEEEEETTEEEESSSCBCCGGGSCCEEECTTCCCCTTSCHHHHHHTTSTTSSCCSHHH
T ss_pred ECCCCchHHHHHHHHhcCCCCCCcEEEECCEECcccccccchhhCCEEEEeCCCcCCCCCCHHHHHHHHHHHcCCChHHH
Confidence 799999999999999999999999999999998431 1223457899999997544 5566543 111 2455666
Q ss_pred HHHHHHHHHhcCCC
Q psy18009 222 FDLLQETCDVIDIP 235 (277)
Q Consensus 222 ~~~~~~~~~~l~I~ 235 (277)
++.++++++.+++.
T Consensus 116 ~~~v~~~l~~~gL~ 129 (359)
T 3fvq_A 116 RQRIEAMLELTGIS 129 (359)
T ss_dssp HHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHcCCc
Confidence 78889999999885
No 92
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=99.34 E-value=4.2e-12 Score=111.37 Aligned_cols=82 Identities=15% Similarity=0.327 Sum_probs=60.2
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHhhc---ccChHHHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQKN---FVDMENMFDLL 225 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~~~---~~~~~~~~~~~ 225 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++. ..++.|+||||++.++ +.|+...-.. +...+.+.+.+
T Consensus 41 iG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~-----~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~ 115 (214)
T 1sgw_A 41 HGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT-----KVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEI 115 (214)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGG-----GGGGGEEEECSSCCCCTTSBHHHHHHHHHHHTTCCCCHHHH
T ss_pred ECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEhh-----hhcCcEEEEeCCCcCCCCCCHHHHHHHHHHhcCCchHHHHH
Confidence 7999999999999999999999999999999885 2467799999996433 2354322110 10101225678
Q ss_pred HHHHHhcCCCC
Q psy18009 226 QETCDVIDIPQ 236 (277)
Q Consensus 226 ~~~~~~l~I~~ 236 (277)
.++++.+++..
T Consensus 116 ~~~l~~~gl~~ 126 (214)
T 1sgw_A 116 MDALESVEVLD 126 (214)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHHcCCCc
Confidence 88999998864
No 93
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=99.34 E-value=5e-12 Score=118.97 Aligned_cols=84 Identities=24% Similarity=0.416 Sum_probs=64.0
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHH-hh----cccChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAI-QK----NFVDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~----~~~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...++ .+++|+||||++.+| +.|+... .. .-++.+..++
T Consensus 47 lGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~--~~r~ig~v~Q~~~l~~~ltv~eni~~~l~~~~~~~~~~~~ 124 (355)
T 1z47_A 47 LGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPP--QKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDA 124 (355)
T ss_dssp ECSTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTCCG--GGSSEEEECGGGCCCTTSCHHHHHHHHHHHTTCCHHHHHH
T ss_pred ECCCCCcHHHHHHHHhCCCCCCccEEEECCEECCcCCh--hhCcEEEEecCcccCCCCCHHHHHHHHHHHcCCCHHHHHH
Confidence 79999999999999999999999999999999865443 357899999996433 3455422 11 1134455567
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.++++++.+++.
T Consensus 125 ~v~~~l~~~gL~ 136 (355)
T 1z47_A 125 RVRELLRFMRLE 136 (355)
T ss_dssp HHHHHHHHTTCG
T ss_pred HHHHHHHHcCCh
Confidence 889999999984
No 94
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=99.31 E-value=9.1e-12 Score=117.48 Aligned_cols=84 Identities=23% Similarity=0.411 Sum_probs=64.4
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHH-hhc----ccChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAI-QKN----FVDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~~----~~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...++. +++|+||||++.+| +.|+... ..+ -.+....++
T Consensus 35 lGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~--~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~~~ 112 (362)
T 2it1_A 35 LGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPK--DRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDK 112 (362)
T ss_dssp ECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG--GTTEEEECTTCCCCTTSCHHHHHHHHHHHTTCCHHHHHH
T ss_pred ECCCCchHHHHHHHHhcCCCCCceEEEECCEECCcCCHh--HCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH
Confidence 799999999999999999999999999999998765532 46799999996433 3455432 111 134455567
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.++++++.+++.
T Consensus 113 ~v~~~l~~~~L~ 124 (362)
T 2it1_A 113 KVREVAKMLHID 124 (362)
T ss_dssp HHHHHHHHTTCT
T ss_pred HHHHHHHHcCCc
Confidence 889999999985
No 95
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=99.29 E-value=7.4e-12 Score=117.97 Aligned_cols=84 Identities=21% Similarity=0.385 Sum_probs=64.3
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHH-hhcc----cChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAI-QKNF----VDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~~~----~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...++. +++|+||||++.+| +.|+... ..++ .+....++
T Consensus 35 lGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~--~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~~~ 112 (359)
T 2yyz_A 35 LGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPK--YREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEK 112 (359)
T ss_dssp ECSTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG--GTTEEEECSSCCCCTTSCHHHHHHGGGSSSCSHHHHTTH
T ss_pred EcCCCchHHHHHHHHHCCCCCCccEEEECCEECCCCChh--hCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH
Confidence 799999999999999999999999999999998765532 46799999997544 4566543 2221 22333456
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.++++++.+++.
T Consensus 113 ~v~~~l~~~~L~ 124 (359)
T 2yyz_A 113 RVVEIARKLLID 124 (359)
T ss_dssp HHHHHHHHTTCG
T ss_pred HHHHHHHHcCCc
Confidence 788999999884
No 96
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=99.28 E-value=7.9e-12 Score=118.28 Aligned_cols=84 Identities=15% Similarity=0.334 Sum_probs=62.1
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHh-hcc----cChHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQ-KNF----VDMENMFD 223 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~-~~~----~~~~~~~~ 223 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++...++. +++|+||||++.+| +.|+...- .++ .+....++
T Consensus 43 lGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~--~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~~~ 120 (372)
T 1v43_A 43 LGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK--DRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDK 120 (372)
T ss_dssp ECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG--GGTEEEEEC------CCCHHHHHHTTCC--CCCHHHHHH
T ss_pred ECCCCChHHHHHHHHHcCCCCCceEEEECCEECCCCChh--hCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH
Confidence 799999999999999999999999999999998765432 46799999997544 45665432 121 33444567
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.++++++.+++.
T Consensus 121 ~v~~~l~~~~L~ 132 (372)
T 1v43_A 121 RVRWAAELLQIE 132 (372)
T ss_dssp HHHHHHHHTTCG
T ss_pred HHHHHHHHcCCh
Confidence 789999999884
No 97
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=99.28 E-value=2.2e-12 Score=126.43 Aligned_cols=81 Identities=14% Similarity=0.047 Sum_probs=72.5
Q ss_pred cCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHH-----HHHHHHHHHHHHhcC-ceEEEEecCc--------
Q psy18009 55 AGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTK-----TERNIQSALNRVCAS-RTTIIVAHRL-------- 120 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~-----~~~~l~~~l~~l~~~-~tiIiIsH~l-------- 120 (277)
.+..+..||+||+|++++|+++..+|++||+| ||++||.. .++.+.++++.+++. .|+|+++|++
T Consensus 347 ~~~~p~~LS~g~~q~~~~a~~l~~~p~llilD-p~~~Ld~~~~~~~~~~~i~~ll~~l~~~g~tvilvsh~~~~~~~~~~ 425 (525)
T 1tf7_A 347 VCAYPESAGLEDHLQIIKSEINDFKPARIAID-SLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSI 425 (525)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHTTCCSEEEEE-CHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSSSCCCSS
T ss_pred EEeccccCCHHHHHHHHHHHHHhhCCCEEEEc-ChHHHHhhCChHHHHHHHHHHHHHHHhCCCEEEEEECcccccCcccc
Confidence 34456779999999999999999999999999 99999999 999999999998764 5888899999
Q ss_pred --chhcc-CceEEEeeCcE
Q psy18009 121 --STIIH-ADEILVMHAGE 136 (277)
Q Consensus 121 --~ev~~-~Drv~vL~dG~ 136 (277)
.++.. ||+|++|++|+
T Consensus 426 ~~~~l~~~~D~vi~L~~ge 444 (525)
T 1tf7_A 426 TDSHISTITDTIILLQYVE 444 (525)
T ss_dssp CSSCCTTTCSEEEEEEEEE
T ss_pred cCcccceeeeEEEEEEEEE
Confidence 66766 99999999987
No 98
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=99.28 E-value=1.2e-11 Score=116.93 Aligned_cols=85 Identities=20% Similarity=0.356 Sum_probs=63.8
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccC------CcHHHHhcceEEEcCCchhh-HHhHHHH-hhc----cc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT------VSQASLRQAIGVVPQDTVLF-NNSIKAI-QKN----FV 216 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~------~~~~~~~~~i~~vpqd~~~~-n~~~~~~-~~~----~~ 216 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++.. .++ .+++|+||||++.+| +.|+... ..+ -.
T Consensus 34 llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~~~~~--~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~ 111 (372)
T 1g29_1 34 LLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPP--KDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKV 111 (372)
T ss_dssp EECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCG--GGSSEEEECSCCCCCTTSCHHHHHHHHHHHTTC
T ss_pred EECCCCcHHHHHHHHHHcCCCCCccEEEECCEECccccccccCCH--hHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCC
Confidence 379999999999999999999999999999998864 332 256799999996433 4455432 111 13
Q ss_pred ChHHHHHHHHHHHHhcCCC
Q psy18009 217 DMENMFDLLQETCDVIDIP 235 (277)
Q Consensus 217 ~~~~~~~~~~~~~~~l~I~ 235 (277)
.....++.++++++.+++.
T Consensus 112 ~~~~~~~~v~~~l~~~~L~ 130 (372)
T 1g29_1 112 PRQEIDQRVREVAELLGLT 130 (372)
T ss_dssp CHHHHHHHHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHHHCCCc
Confidence 4455567788999999884
No 99
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=99.28 E-value=1.3e-11 Score=110.24 Aligned_cols=86 Identities=27% Similarity=0.392 Sum_probs=62.3
Q ss_pred cCCCCCchhHHHHHHhcc--ccCceeEEEECCEeccCCcHHH-HhcceEEEcCCchhhH-HhHHHHh-------hc-ccC
Q psy18009 150 VGQSGAGKSTIIRLLFRF--YDVESGDIFIDNQNIKTVSQAS-LRQAIGVVPQDTVLFN-NSIKAIQ-------KN-FVD 217 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl--~~~~~G~i~~~g~~~~~~~~~~-~~~~i~~vpqd~~~~n-~~~~~~~-------~~-~~~ 217 (277)
+|+||||||||+++|+|+ .+|++|+|.++|+++...+... .+.+++|+||++.++. .++...- .+ ...
T Consensus 35 ~G~nGsGKSTLlk~l~Gl~~~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~ 114 (250)
T 2d2e_A 35 MGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGVTIANFLRLALQAKLGREVG 114 (250)
T ss_dssp ECSTTSSHHHHHHHHHTCTTCEEEEEEEEETTEECTTSCHHHHHHTTBCCCCCCCC-CCSCBHHHHHHHHHHHHHTSCCC
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEECCCCCHHHHHhCcEEEeccCCccccCCCHHHHHHHHHHhhccccCC
Confidence 799999999999999998 7899999999999987666444 3567999999964332 3332210 11 123
Q ss_pred hHHHHHHHHHHHHhcCCC
Q psy18009 218 MENMFDLLQETCDVIDIP 235 (277)
Q Consensus 218 ~~~~~~~~~~~~~~l~I~ 235 (277)
.....+.+.++++++++.
T Consensus 115 ~~~~~~~~~~~l~~~gl~ 132 (250)
T 2d2e_A 115 VAEFWTKVKKALELLDWD 132 (250)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 334456778899999884
No 100
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=99.27 E-value=1e-12 Score=128.80 Aligned_cols=67 Identities=16% Similarity=0.250 Sum_probs=56.3
Q ss_pred HHHHHHHHhc-cCCCEEEEecCCCC-----CCHHHHHHHHHHHHHHhc-CceEEEEecCcchh---------cc-CceEE
Q psy18009 68 QRVAIARTLL-KAPQIVLLDEATSA-----LDTKTERNIQSALNRVCA-SRTTIIVAHRLSTI---------IH-ADEIL 130 (277)
Q Consensus 68 Qrv~IAral~-~~p~ilILDEPTa~-----LD~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ev---------~~-~Drv~ 130 (277)
++-.++++|. .+|++++|||||+. ||+..++.++++++.+++ +.|+|++||+++++ .. ||+|+
T Consensus 126 ~~~~~~~~LS~g~~~~lilDe~t~~~~~~~lD~~~~~~l~~ll~~l~~~g~tvl~itH~~~~~~~~~~~~i~~~laD~vi 205 (525)
T 1tf7_A 126 LIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVV 205 (525)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSTTTSTTTCCHHHHHHHHHHHHHHHHHHTCEEEEEEECSSSSSCSSTTSCHHHHCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCHHHHHHhcCCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCccccccccceeeeeeEEE
Confidence 4555666664 68999999999984 689999999999999976 56888899999985 35 99999
Q ss_pred EeeC
Q psy18009 131 VMHA 134 (277)
Q Consensus 131 vL~d 134 (277)
+|++
T Consensus 206 ~L~~ 209 (525)
T 1tf7_A 206 ILRN 209 (525)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 101
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=99.26 E-value=2.6e-11 Score=109.49 Aligned_cols=87 Identities=23% Similarity=0.360 Sum_probs=62.1
Q ss_pred cCCCCCchhHHHHHHhcc--ccCceeEEEECCEeccCCcHHHH-hcceEEEcCCchh-------hHHhHHH--Hh--hcc
Q psy18009 150 VGQSGAGKSTIIRLLFRF--YDVESGDIFIDNQNIKTVSQASL-RQAIGVVPQDTVL-------FNNSIKA--IQ--KNF 215 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl--~~~~~G~i~~~g~~~~~~~~~~~-~~~i~~vpqd~~~-------~n~~~~~--~~--~~~ 215 (277)
+|+||||||||+++|+|+ .+|++|+|.++|+++...+.... +++|+||||++.+ .|..... .. .+.
T Consensus 52 ~G~NGsGKSTLlk~l~Gl~~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~e~~~~~~~~~~~~~~~ 131 (267)
T 2zu0_C 52 MGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQ 131 (267)
T ss_dssp ECCTTSSHHHHHHHHHTCTTCEEEEEEEEETTEEGGGSCHHHHHHHTEEEECSSCCCCTTCBHHHHHHHHHHHHHHGGGC
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCcCCHHHHhhCCEEEEccCccccccccHHHHHHHHHHhhhhhhcc
Confidence 799999999999999999 46889999999999876654443 4579999999643 2222211 11 111
Q ss_pred --cChHHHHHHHHHHHHhcCCCC
Q psy18009 216 --VDMENMFDLLQETCDVIDIPQ 236 (277)
Q Consensus 216 --~~~~~~~~~~~~~~~~l~I~~ 236 (277)
.+.+...+.++++++.+++.+
T Consensus 132 ~~~~~~~~~~~~~~~l~~~gl~~ 154 (267)
T 2zu0_C 132 ETLDRFDFQDLMEEKIALLKMPE 154 (267)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCT
T ss_pred ccCCHHHHHHHHHHHHHHcCCCh
Confidence 233444567889999999853
No 102
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=99.25 E-value=9.3e-12 Score=116.97 Aligned_cols=86 Identities=23% Similarity=0.364 Sum_probs=64.4
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCc---HHHHhcceEEEcCCchhh-HHhHHHHh-hc----ccChHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS---QASLRQAIGVVPQDTVLF-NNSIKAIQ-KN----FVDMEN 220 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~---~~~~~~~i~~vpqd~~~~-n~~~~~~~-~~----~~~~~~ 220 (277)
+|+||||||||+++|+|+.+|++|+|.++|+++.... ....+++|+||||++.+| +.|+...- .+ -++.+.
T Consensus 37 lGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~ 116 (353)
T 1oxx_K 37 LGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEE 116 (353)
T ss_dssp ECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSCHHHHHHGGGTTSSCCHHH
T ss_pred ECCCCCcHHHHHHHHhCCCCCCceEEEECCEECcccccccCChhhCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHH
Confidence 7999999999999999999999999999999886411 112357899999997443 45665331 11 124445
Q ss_pred HHHHHHHHHHhcCCC
Q psy18009 221 MFDLLQETCDVIDIP 235 (277)
Q Consensus 221 ~~~~~~~~~~~l~I~ 235 (277)
.++.++++++.+++.
T Consensus 117 ~~~~v~~~l~~~~L~ 131 (353)
T 1oxx_K 117 IRKRVEEVAKILDIH 131 (353)
T ss_dssp HHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCCc
Confidence 567889999999884
No 103
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=99.25 E-value=2.1e-11 Score=114.36 Aligned_cols=84 Identities=24% Similarity=0.395 Sum_probs=61.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHh-hc--ccChHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQ-KN--FVDMENMFDL 224 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~-~~--~~~~~~~~~~ 224 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++...++ .+++|+||||++.+| +.|+...- .+ .....+. +.
T Consensus 31 llGpnGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~--~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~~~~~~~-~~ 107 (348)
T 3d31_A 31 ILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSP--EKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDP-KR 107 (348)
T ss_dssp EECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCH--HHHTCEEECTTCCCCTTSCHHHHHHHHHHHHCCCCH-HH
T ss_pred EECCCCccHHHHHHHHHcCCCCCCcEEEECCEECCCCch--hhCcEEEEecCcccCCCCCHHHHHHHHHHHcCCCHH-HH
Confidence 379999999999999999999999999999999875443 256799999996443 34554321 11 1011112 67
Q ss_pred HHHHHHhcCCC
Q psy18009 225 LQETCDVIDIP 235 (277)
Q Consensus 225 ~~~~~~~l~I~ 235 (277)
++++++.+++.
T Consensus 108 v~~~l~~~~L~ 118 (348)
T 3d31_A 108 VLDTARDLKIE 118 (348)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHcCCc
Confidence 88899999885
No 104
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=99.25 E-value=1.7e-11 Score=111.38 Aligned_cols=87 Identities=26% Similarity=0.337 Sum_probs=68.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCC--cHHHHhcceEEEcCCc--hhhHHhHHHHh-h----cccChH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTV--SQASLRQAIGVVPQDT--VLFNNSIKAIQ-K----NFVDME 219 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~~~i~~vpqd~--~~~n~~~~~~~-~----~~~~~~ 219 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++... ....++++||||||++ .+++.|+...- . .-++.+
T Consensus 39 iiGpnGsGKSTLl~~l~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~~ig~v~Q~~~~~~~~~tv~e~l~~~~~~~~~~~~ 118 (275)
T 3gfo_A 39 ILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPED 118 (275)
T ss_dssp EECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCCSHHHHHHHHHSEEEECSSGGGTCCSSBHHHHHHHHHHTSCCCHH
T ss_pred EECCCCCCHHHHHHHHHcCCCCCCeEEEECCEECCcccccHHHHhCcEEEEEcCcccccccCcHHHHHHHHHHHcCCCHH
Confidence 4799999999999999999999999999999998532 2345678899999986 45566665321 1 124566
Q ss_pred HHHHHHHHHHHhcCCC
Q psy18009 220 NMFDLLQETCDVIDIP 235 (277)
Q Consensus 220 ~~~~~~~~~~~~l~I~ 235 (277)
...+.++++++.+++.
T Consensus 119 ~~~~~~~~~l~~~~L~ 134 (275)
T 3gfo_A 119 EIRKRVDNALKRTGIE 134 (275)
T ss_dssp HHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHcCCc
Confidence 6778899999999984
No 105
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=99.20 E-value=9.3e-15 Score=135.00 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=92.1
Q ss_pred ccHHHhhcccccccCCCCCccccccCceEEEeeeeeeeCchHHhhcccCcccccCCeeec--------------------
Q psy18009 2 ENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILKNISFTVPAGKTLAL-------------------- 61 (277)
Q Consensus 2 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~i~~~nvsf~Y~~~~~vL~~l~l~i~~~~~v~~-------------------- 61 (277)
+||.++++.+++..... ..+.+..+.|+++||+|+|. ..+|+++++++.+|+.++.
T Consensus 76 ~ri~~~l~~~~~~~~~~--~~~~~~~~~i~~~~vs~~y~--~~vL~~vsl~i~~Ge~vaIvGpsGsGKSTLl~lL~gl~~ 151 (305)
T 2v9p_A 76 LSMPAYIKARCKLATGE--GSWKSILTFFNYQNIELITF--INALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLG 151 (305)
T ss_dssp SCHHHHHHHHHHHCCSS--CCTHHHHHHHHHTTCCHHHH--HHHHHHHHHTCTTCSEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCCC--CcccccCCeEEEEEEEEEcC--hhhhccceEEecCCCEEEEECCCCCcHHHHHHHHhhhcC
Confidence 57888888766543211 11112345789999999996 5789999999999987653
Q ss_pred -------------------------------------------------cCHHHHHHHHHHHHhccCCCEEEEecCCCCC
Q psy18009 62 -------------------------------------------------LSGGEKQRVAIARTLLKAPQIVLLDEATSAL 92 (277)
Q Consensus 62 -------------------------------------------------LSgGqrQrv~IAral~~~p~ilILDEPTa~L 92 (277)
|||||||| |||++++|+||| ||+|
T Consensus 152 G~I~~~v~q~~~lf~~ti~~~ni~~~~~~~~~~~~~i~~~L~~gldg~~LSgGqkQR---ARAll~~p~iLl----Ts~L 224 (305)
T 2v9p_A 152 GSVLSFANHKSHFWLASLADTRAALVDDATHACWRYFDTYLRNALDGYPVSIDRKHK---AAVQIKAPPLLV----TSNI 224 (305)
T ss_dssp CEEECGGGTTSGGGGGGGTTCSCEEEEEECHHHHHHHHHTTTGGGGTCCEECCCSSC---CCCEECCCCEEE----EESS
T ss_pred ceEEEEecCccccccccHHHHhhccCccccHHHHHHHHHHhHccCCccCcCHHHHHH---HHHHhCCCCEEE----ECCC
Confidence 89999999 999999999999 9999
Q ss_pred CHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCcEEEEecCcee
Q psy18009 93 DTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGSLFV 145 (277)
Q Consensus 93 D~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG~iv~~g~~~~ 145 (277)
|+.+.+.+.. ++|+++.+..|||| +|++|++++.|++..
T Consensus 225 D~~~~~~i~~-------------ltH~~~~~~~aD~i-vl~~G~iv~~g~~~e 263 (305)
T 2v9p_A 225 DVQAEDRYLY-------------LHSRVQTFRFEQPC-TDESGEQPFNITDAD 263 (305)
T ss_dssp CSTTCGGGGG-------------GTTTEEEEECCCCC-CCC---CCCCCCHHH
T ss_pred CHHHHHHHHH-------------HhCCHHHHHhCCEE-EEeCCEEEEeCCHHH
Confidence 9999888752 29999887779999 999999998887643
No 106
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=99.20 E-value=4e-11 Score=107.01 Aligned_cols=62 Identities=45% Similarity=0.720 Sum_probs=54.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++...+...+++.|+||||++.+++.|+..
T Consensus 40 i~G~nGsGKSTLl~~l~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~e 101 (247)
T 2ff7_A 40 IVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIID 101 (247)
T ss_dssp EECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBHHH
T ss_pred EECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHHhcEEEEeCCCccccccHHH
Confidence 47999999999999999999999999999999998766666777899999998777666654
No 107
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=5.2e-13 Score=116.58 Aligned_cols=55 Identities=22% Similarity=0.234 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhc
Q psy18009 65 GEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTII 124 (277)
Q Consensus 65 GqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~ 124 (277)
||||||+|||||+.+|++|||||||++ .++.+.++|+++.++.|+| +||+++++.
T Consensus 108 Gq~qrv~lAraL~~~p~lllLDEPts~----~~~~l~~~l~~l~~g~tii-vtHd~~~~~ 162 (208)
T 3b85_A 108 VEVAPLAYMRGRTLNDAFVILDEAQNT----TPAQMKMFLTRLGFGSKMV-VTGDITQVD 162 (208)
T ss_dssp EEEEEGGGGTTCCBCSEEEEECSGGGC----CHHHHHHHHTTBCTTCEEE-EEEC-----
T ss_pred chHHHHHHHHHHhcCCCEEEEeCCccc----cHHHHHHHHHHhcCCCEEE-EECCHHHHh
Confidence 999999999999999999999999999 7888899998883345777 999988664
No 108
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=99.19 E-value=5.6e-13 Score=123.91 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=76.6
Q ss_pred EeeeeeeeCchHHhhcccCcccccCCeeec-----------------------------------c----------C-HH
Q psy18009 32 FRNVSFSYTPERAILKNISFTVPAGKTLAL-----------------------------------L----------S-GG 65 (277)
Q Consensus 32 ~~nvsf~Y~~~~~vL~~l~l~i~~~~~v~~-----------------------------------L----------S-gG 65 (277)
|++++| | ..+++.+++.+.+|+.+.. + + ||
T Consensus 151 ~~~v~f-y---~~~l~~l~~~i~~g~~v~i~G~~GsGKTTll~~l~g~~~~~~g~i~i~~~~e~~~~~~~~~i~~~~ggg 226 (330)
T 2pt7_A 151 YNLLDN-K---EQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGN 226 (330)
T ss_dssp TTTSTT-H---HHHHHHHHHHHHHTCCEEEEESTTSCHHHHHHHGGGGSCTTSCEEEEESSCCCCCSSCSSEEEEECBTT
T ss_pred cCchhh-H---HHHHhhhhhhccCCCEEEEECCCCCCHHHHHHHHhCCCcCCCcEEEECCeeccccccchhEEEEEeCCC
Confidence 778888 6 4588888888888887653 1 1 79
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCc-eEEEEecCcchhccCceEEEeeCcE
Q psy18009 66 EKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR-TTIIVAHRLSTIIHADEILVMHAGE 136 (277)
Q Consensus 66 qrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~-tiIiIsH~l~ev~~~Drv~vL~dG~ 136 (277)
|+||++||+||..+|++|||||||+. .+.+.++.+..++ ++|+++|+++....|||+++|.+|.
T Consensus 227 ~~~r~~la~aL~~~p~ilildE~~~~-------e~~~~l~~~~~g~~tvi~t~H~~~~~~~~dri~~l~~g~ 291 (330)
T 2pt7_A 227 ITSADCLKSCLRMRPDRIILGELRSS-------EAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSN 291 (330)
T ss_dssp BCHHHHHHHHTTSCCSEEEECCCCST-------HHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHTS
T ss_pred hhHHHHHHHHhhhCCCEEEEcCCChH-------HHHHHHHHHhcCCCEEEEEEcccHHHHHhhhheehhcCC
Confidence 99999999999999999999999982 3566777777665 6888999999444599999998874
No 109
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=99.17 E-value=1.4e-10 Score=109.50 Aligned_cols=87 Identities=24% Similarity=0.386 Sum_probs=67.5
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHH---HHhcceEEEcCCchhh-HHhHHHH-----hhcccChH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQA---SLRQAIGVVPQDTVLF-NNSIKAI-----QKNFVDME 219 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~---~~~~~i~~vpqd~~~~-n~~~~~~-----~~~~~~~~ 219 (277)
.+|+||||||||+++|.|+.+|++|+|.++|+++...+.. ..+++||||||++.++ +.|+... ...-.+.+
T Consensus 59 IiGpnGaGKSTLlr~i~GL~~p~~G~I~i~G~~i~~~~~~~~~~~r~~Ig~v~Q~~~l~~~~TV~env~~~~~~~~~~~~ 138 (366)
T 3tui_C 59 VIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKD 138 (366)
T ss_dssp EECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECSSCCHHHHHHHHTTEEEECSSCCCCTTSCHHHHHHHHHHHSCCCHH
T ss_pred EEcCCCchHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhCcEEEEeCCCccCCCCCHHHHHHHHHHhcCCCHH
Confidence 4899999999999999999999999999999999876643 3467899999996332 3344321 11124666
Q ss_pred HHHHHHHHHHHhcCCC
Q psy18009 220 NMFDLLQETCDVIDIP 235 (277)
Q Consensus 220 ~~~~~~~~~~~~l~I~ 235 (277)
+.++.+.++++.+++.
T Consensus 139 ~~~~~v~~lL~~vgL~ 154 (366)
T 3tui_C 139 EVKRRVTELLSLVGLG 154 (366)
T ss_dssp HHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHcCCc
Confidence 7778899999999885
No 110
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=99.17 E-value=7.7e-11 Score=106.41 Aligned_cols=87 Identities=24% Similarity=0.300 Sum_probs=69.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch-hhHHhHHHHhh-c--ccChHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV-LFNNSIKAIQK-N--FVDMENMFDL 224 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~-~~n~~~~~~~~-~--~~~~~~~~~~ 224 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++...+...+++.++|+||++. .++.|+...-. + ....+..++.
T Consensus 42 liG~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 121 (266)
T 4g1u_C 42 IIGPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPYGGSQDRQA 121 (266)
T ss_dssp EECCTTSCHHHHHHHHTSSSCCSSCEEEETTEETTTSCHHHHHHHEEEECSCCCCCSCCBHHHHHHGGGTTSCSTTHHHH
T ss_pred EECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCCHHHHhheEEEEecCCccCCCCCHHHHHHhhhhhcCcHHHHHH
Confidence 479999999999999999999999999999999988887777788999999863 35666654311 1 1234455677
Q ss_pred HHHHHHhcCCC
Q psy18009 225 LQETCDVIDIP 235 (277)
Q Consensus 225 ~~~~~~~l~I~ 235 (277)
+.++++.+++.
T Consensus 122 ~~~~l~~~~l~ 132 (266)
T 4g1u_C 122 LQQVMAQTDCL 132 (266)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCh
Confidence 88999999885
No 111
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=99.16 E-value=1.9e-11 Score=110.41 Aligned_cols=82 Identities=20% Similarity=0.351 Sum_probs=60.5
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceE-EEcCCchhhHHhHHHHhhcccC-hHHHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIG-VVPQDTVLFNNSIKAIQKNFVD-MENMFDLLQ 226 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~-~vpqd~~~~n~~~~~~~~~~~~-~~~~~~~~~ 226 (277)
.+|+||||||||+++|+|+. |++|+|.++|+++... .. +++|+ |+||++.+ +.|+...-..+.. .+...+.+.
T Consensus 35 i~G~NGsGKSTLlk~l~Gl~-p~~G~I~~~g~~~~~~--~~-~~~i~~~v~Q~~~l-~~tv~enl~~~~~~~~~~~~~~~ 109 (263)
T 2pjz_A 35 ILGPNGSGKTTLLRAISGLL-PYSGNIFINGMEVRKI--RN-YIRYSTNLPEAYEI-GVTVNDIVYLYEELKGLDRDLFL 109 (263)
T ss_dssp EECCTTSSHHHHHHHHTTSS-CCEEEEEETTEEGGGC--SC-CTTEEECCGGGSCT-TSBHHHHHHHHHHHTCCCHHHHH
T ss_pred EECCCCCCHHHHHHHHhCCC-CCCcEEEECCEECcch--HH-hhheEEEeCCCCcc-CCcHHHHHHHhhhhcchHHHHHH
Confidence 37999999999999999999 9999999999988643 22 56799 99999766 6666432111100 012245678
Q ss_pred HHHHhcCCC
Q psy18009 227 ETCDVIDIP 235 (277)
Q Consensus 227 ~~~~~l~I~ 235 (277)
++++++++.
T Consensus 110 ~~l~~~gl~ 118 (263)
T 2pjz_A 110 EMLKALKLG 118 (263)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 899999885
No 112
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=99.16 E-value=2.7e-11 Score=111.77 Aligned_cols=63 Identities=70% Similarity=1.004 Sum_probs=57.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAI 211 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~ 211 (277)
.+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.|+||||++.+|+.|+...
T Consensus 85 ivG~sGsGKSTLl~ll~gl~~p~~G~I~i~G~~i~~~~~~~~r~~i~~v~Q~~~lf~~Tv~eN 147 (306)
T 3nh6_A 85 LVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADN 147 (306)
T ss_dssp EESSSCHHHHHHHHHHTTSSCCSEEEEEETTEETTSBCHHHHHHTEEEECSSCCCCSEEHHHH
T ss_pred EECCCCchHHHHHHHHHcCCCCCCcEEEECCEEcccCCHHHHhcceEEEecCCccCcccHHHH
Confidence 489999999999999999999999999999999998888888899999999998888887643
No 113
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=99.16 E-value=2.5e-11 Score=107.88 Aligned_cols=87 Identities=33% Similarity=0.438 Sum_probs=63.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHHhhcccChHHHHHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQET 228 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
.+|+||||||||+++|+|+.+|++|+|.++|+++...+...+++.|+||||++.+++.|+...-..........+.+.+.
T Consensus 33 i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~ 112 (243)
T 1mv5_A 33 FAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQV 112 (243)
T ss_dssp EECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCCEECCSSCCCCEEHHHHTTSCTTSCSCHHHHHHH
T ss_pred EECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHHhhEEEEcCCCccccccHHHHHhhhccCCCCHHHHHHH
Confidence 47999999999999999999999999999999987655444567899999998777666654322111111122345666
Q ss_pred HHhcCCC
Q psy18009 229 CDVIDIP 235 (277)
Q Consensus 229 ~~~l~I~ 235 (277)
++.+++.
T Consensus 113 l~~~~l~ 119 (243)
T 1mv5_A 113 LDLAFAR 119 (243)
T ss_dssp HHHHTCT
T ss_pred HHHhChH
Confidence 7776664
No 114
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=99.13 E-value=2.5e-10 Score=108.28 Aligned_cols=85 Identities=26% Similarity=0.457 Sum_probs=67.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHH-----hhcccChHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAI-----QKNFVDMENMF 222 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~-----~~~~~~~~~~~ 222 (277)
.+|+||||||||+++|+|+.+|++|+|+++|+++...++. +++|+||||++.+| +.|+... +..-++.+..+
T Consensus 34 llGpsGsGKSTLLr~iaGl~~p~~G~I~i~G~~~~~~~~~--~r~ig~VfQ~~~l~p~ltV~eni~~~~~~~~~~~~~~~ 111 (381)
T 3rlf_A 34 FVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPA--ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVIN 111 (381)
T ss_dssp EECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTCCGG--GSCEEEECTTCCCCTTSCHHHHHTHHHHHTTCCHHHHH
T ss_pred EEcCCCchHHHHHHHHHcCCCCCCeEEEECCEECCCCCHH--HCCEEEEecCCcCCCCCCHHHHHHHHHHHcCCCHHHHH
Confidence 4799999999999999999999999999999999766543 46799999996433 4455432 11235667778
Q ss_pred HHHHHHHHhcCCC
Q psy18009 223 DLLQETCDVIDIP 235 (277)
Q Consensus 223 ~~~~~~~~~l~I~ 235 (277)
+.++++++.+++.
T Consensus 112 ~~v~~~l~~~~L~ 124 (381)
T 3rlf_A 112 QRVNQVAEVLQLA 124 (381)
T ss_dssp HHHHHHHHHTTCG
T ss_pred HHHHHHHHHcCCc
Confidence 8899999999985
No 115
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.12 E-value=1.3e-10 Score=104.19 Aligned_cols=73 Identities=27% Similarity=0.349 Sum_probs=54.1
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHhh-c------c--cChH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQK-N------F--VDME 219 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~~-~------~--~~~~ 219 (277)
+|+||||||||+++|+|+.+|++|+|. +++.|+||||++.++ +.|+...-. + + ...+
T Consensus 37 ~G~nGsGKSTLl~~l~Gl~~p~~G~I~-------------~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~ 103 (253)
T 2nq2_C 37 LGQNGCGKSTLLDLLLGIHRPIQGKIE-------------VYQSIGFVPQFFSSPFAYSVLDIVLMGRSTHINTFAKPKS 103 (253)
T ss_dssp ECCSSSSHHHHHHHHTTSSCCSEEEEE-------------ECSCEEEECSCCCCSSCCBHHHHHHGGGGGGSCTTCCCCH
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEE-------------EeccEEEEcCCCccCCCCCHHHHHHHhhhhhcccccCCCH
Confidence 799999999999999999999999998 245799999996443 555543211 1 1 1123
Q ss_pred HHHHHHHHHHHhcCCC
Q psy18009 220 NMFDLLQETCDVIDIP 235 (277)
Q Consensus 220 ~~~~~~~~~~~~l~I~ 235 (277)
...+.+.++++.+++.
T Consensus 104 ~~~~~~~~~l~~~~l~ 119 (253)
T 2nq2_C 104 HDYQVAMQALDYLNLT 119 (253)
T ss_dssp HHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHcCCh
Confidence 4456788899999885
No 116
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=99.10 E-value=2.2e-10 Score=102.57 Aligned_cols=85 Identities=20% Similarity=0.242 Sum_probs=64.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHhh-cccChHHHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQK-NFVDMENMFDLLQ 226 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~~-~~~~~~~~~~~~~ 226 (277)
.+|+||||||||+++|+|+.+|+ |+|.++|+++...+...+++.|+|+||++.++ +.|+...-. +...... .+.+.
T Consensus 31 liG~NGsGKSTLlk~l~Gl~~p~-G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~ 108 (249)
T 2qi9_C 31 LVGPNGAGKSTLLARMAGMTSGK-GSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTR-TELLN 108 (249)
T ss_dssp EECCTTSSHHHHHHHHTTSSCCE-EEEEETTEEGGGSCHHHHHHHEEEECSCCCCCTTCBHHHHHHTTCSSTTC-HHHHH
T ss_pred EECCCCCcHHHHHHHHhCCCCCC-eEEEECCEECCcCCHHHHhceEEEECCCCccCCCCcHHHHHHHhhccCCc-HHHHH
Confidence 47999999999999999999999 99999999987666666777899999997543 446654322 1111111 56678
Q ss_pred HHHHhcCCC
Q psy18009 227 ETCDVIDIP 235 (277)
Q Consensus 227 ~~~~~l~I~ 235 (277)
++++.+++.
T Consensus 109 ~~l~~~~l~ 117 (249)
T 2qi9_C 109 DVAGALALD 117 (249)
T ss_dssp HHHHHTTCG
T ss_pred HHHHHcCCh
Confidence 889998874
No 117
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=99.04 E-value=3.1e-10 Score=102.00 Aligned_cols=61 Identities=54% Similarity=0.942 Sum_probs=53.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|+|+.++ +|+|.++|+++...+...+++.|+||||++.+++.|+..
T Consensus 51 i~G~nGsGKSTLl~~l~Gl~~~-~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~e 111 (260)
T 2ghi_A 51 LVGHTGSGKSTIAKLLYRFYDA-EGDIKIGGKNVNKYNRNSIRSIIGIVPQDTILFNETIKY 111 (260)
T ss_dssp EECSTTSSHHHHHHHHTTSSCC-EEEEEETTEEGGGBCHHHHHTTEEEECSSCCCCSEEHHH
T ss_pred EECCCCCCHHHHHHHHhccCCC-CeEEEECCEEhhhcCHHHHhccEEEEcCCCcccccCHHH
Confidence 4899999999999999999987 899999999997666666778899999998777667654
No 118
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=99.04 E-value=4.1e-10 Score=111.72 Aligned_cols=63 Identities=43% Similarity=0.734 Sum_probs=56.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAI 211 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~ 211 (277)
.+|+||||||||+++|.|+++|++|+|.++|+++...+...+++.|+|||||+.+|+.|+...
T Consensus 374 ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~en 436 (582)
T 3b5x_A 374 LVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANN 436 (582)
T ss_pred EECCCCCCHHHHHHHHhcCCCCCCCEEEECCEEhhhCCHHHHhcCeEEEcCCCccccccHHHH
Confidence 479999999999999999999999999999999987777778889999999998888777643
No 119
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=99.02 E-value=4.7e-10 Score=111.24 Aligned_cols=62 Identities=42% Similarity=0.791 Sum_probs=56.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|.|+++|++|+|.++|++++..+...+++.|+|||||+.+|+.|+..
T Consensus 374 ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~e 435 (582)
T 3b60_A 374 LVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVAN 435 (582)
T ss_dssp EEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHH
T ss_pred EECCCCCCHHHHHHHHhhccCCCCCeEEECCEEccccCHHHHHhhCeEEccCCcCCCCCHHH
Confidence 47999999999999999999999999999999998877777888899999999888777754
No 120
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=99.02 E-value=3.8e-10 Score=100.40 Aligned_cols=86 Identities=26% Similarity=0.420 Sum_probs=63.8
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh-HHhHHHHhh-c--ccChHHHHH
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF-NNSIKAIQK-N--FVDMENMFD 223 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~-n~~~~~~~~-~--~~~~~~~~~ 223 (277)
..+|+||||||||+++|+|+.+|++|+|.++|+++.... ..+++|+||||++.++ +.|+...-. . +......++
T Consensus 28 ~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~--~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~~~~~~~~ 105 (240)
T 2onk_A 28 VLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLP--PERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDR 105 (240)
T ss_dssp EEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSC--TTTSCCBCCCSSCCCCTTSCHHHHHHTTCTTSCHHHHHH
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCc--hhhCcEEEEcCCCccCCCCcHHHHHHHHHHHcCCchHHH
Confidence 357999999999999999999999999999999886432 2356799999997544 346643321 1 112233467
Q ss_pred HHHHHHHhcCCC
Q psy18009 224 LLQETCDVIDIP 235 (277)
Q Consensus 224 ~~~~~~~~l~I~ 235 (277)
.++++++.+++.
T Consensus 106 ~~~~~l~~~~l~ 117 (240)
T 2onk_A 106 RVREMAEKLGIA 117 (240)
T ss_dssp HHHHHHHTTTCT
T ss_pred HHHHHHHHcCCH
Confidence 788999999885
No 121
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=99.01 E-value=5.6e-10 Score=111.01 Aligned_cols=63 Identities=44% Similarity=0.728 Sum_probs=56.8
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAI 211 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~ 211 (277)
.+|+||||||||+++|.|+++|++|+|.++|++++..+...+++.|+|||||+.+|+.|+...
T Consensus 375 ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~en 437 (595)
T 2yl4_A 375 LVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAEN 437 (595)
T ss_dssp EECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHH
T ss_pred EECCCCCCHHHHHHHHhcCcCCCCcEEEECCEEhhhCCHHHHHhceEEEccCCcccCCCHHHH
Confidence 479999999999999999999999999999999988777778888999999998888777643
No 122
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=99.01 E-value=3.6e-10 Score=117.92 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=69.1
Q ss_pred ccCHHHHHHHHHHHHh--ccCCCEEEEecCCCCCCHHHHHHH-HHHHHHHhc--CceEEEEecCcchhccCceEEEeeCc
Q psy18009 61 LLSGGEKQRVAIARTL--LKAPQIVLLDEATSALDTKTERNI-QSALNRVCA--SRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 61 ~LSgGqrQrv~IAral--~~~p~ilILDEPTa~LD~~~~~~l-~~~l~~l~~--~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
.+|+++.++.++|+++ +.+|+++||||||+|+|+.+...+ ..+++.+.+ ++++|++||+.+....||++..+++|
T Consensus 721 ~lStf~~e~~~~a~il~~a~~~sLlLLDEp~~GlD~~~~~~i~~~il~~l~~~~g~~vl~aTH~~el~~lad~~~~v~ng 800 (934)
T 3thx_A 721 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNL 800 (934)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTCEEEEESCSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEESCGGGGGGGGTCTTEEEE
T ss_pred hHhhhHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCcHHHHHHhcccceeEee
Confidence 4899999999999999 899999999999999999998887 777788764 56888899996655559999999999
Q ss_pred EEEEecC
Q psy18009 136 EIVERGS 142 (277)
Q Consensus 136 ~iv~~g~ 142 (277)
++...++
T Consensus 801 ~v~~~~~ 807 (934)
T 3thx_A 801 HVTALTT 807 (934)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9987554
No 123
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=98.99 E-value=5.7e-10 Score=106.11 Aligned_cols=84 Identities=23% Similarity=0.461 Sum_probs=64.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHHhhcccChHHHHHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQET 228 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
.+|+||||||||+++|+|+.+ ++|+|.++|+++...++...++.|+||||++.+|..|+...-..+- +..++.+.+.
T Consensus 52 llGpsGsGKSTLLr~iaGl~~-~~G~I~i~G~~i~~~~~~~~rr~ig~v~Q~~~lf~~tv~enl~~~~--~~~~~~v~~~ 128 (390)
T 3gd7_A 52 LLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNA--AHSDQEIWKV 128 (390)
T ss_dssp EEESTTSSHHHHHHHHHTCSE-EEEEEEESSCBTTSSCHHHHHHTEEEESCCCCCCSEEHHHHHCTTC--CSCHHHHHHH
T ss_pred EECCCCChHHHHHHHHhCCCC-CCeEEEECCEECCcCChHHHhCCEEEEcCCcccCccCHHHHhhhcc--ccCHHHHHHH
Confidence 479999999999999999998 8999999999998888777788999999998887777754322111 1122345566
Q ss_pred HHhcCCC
Q psy18009 229 CDVIDIP 235 (277)
Q Consensus 229 ~~~l~I~ 235 (277)
++.+++.
T Consensus 129 l~~~~L~ 135 (390)
T 3gd7_A 129 ADEVGLR 135 (390)
T ss_dssp HHHTTCH
T ss_pred HHHhCCH
Confidence 6666653
No 124
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=98.99 E-value=5.9e-10 Score=110.53 Aligned_cols=63 Identities=54% Similarity=0.848 Sum_probs=57.8
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAI 211 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~ 211 (277)
.+|+||||||||+++|.|+++|++|+|.++|++++..+...+++.|+|||||+.+|+.|+...
T Consensus 372 ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~en 434 (578)
T 4a82_A 372 FVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKEN 434 (578)
T ss_dssp EECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHH
T ss_pred EECCCCChHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHhhheEEEeCCCccCcccHHHH
Confidence 479999999999999999999999999999999998888888889999999998888888643
No 125
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=98.96 E-value=6.1e-10 Score=110.92 Aligned_cols=62 Identities=48% Similarity=0.930 Sum_probs=57.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|.|+++|++|+|.++|+++...+...++++|+|||||+.+|+.|+..
T Consensus 386 ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~e 447 (598)
T 3qf4_B 386 LVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKE 447 (598)
T ss_dssp EECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHH
T ss_pred EECCCCCcHHHHHHHHhcCcCCCCeEEEECCEEhhhCCHHHHHhceEEEeCCCccccccHHH
Confidence 47999999999999999999999999999999999888888888999999999888887754
No 126
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=98.94 E-value=9e-10 Score=116.02 Aligned_cols=75 Identities=16% Similarity=0.136 Sum_probs=63.8
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHH-HHHHHHHHHHhc--CceEEEEecCcchhcc-CceEEEeeCcEE
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTE-RNIQSALNRVCA--SRTTIIVAHRLSTIIH-ADEILVMHAGEI 137 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~-~~l~~~l~~l~~--~~tiIiIsH~l~ev~~-~Drv~vL~dG~i 137 (277)
+|+++++ +++|++++.+|+++||||||+|+|+.+. ..++++++.+.+ ++++|++||+++.+.. ||++.++ +|++
T Consensus 852 f~~em~~-~a~al~la~~~sLlLLDEp~~Gtd~~dg~~~~~~il~~L~~~~g~~vl~~TH~~el~~~~~d~~~v~-~g~~ 929 (1022)
T 2o8b_B 852 FFVELSE-TASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVR-LGHM 929 (1022)
T ss_dssp HHHHHHH-HHHHHHHCCTTCEEEEECTTTTSCHHHHHHHHHHHHHHHHHTSCCEEEEECCCHHHHHHTSSCSSEE-EEEE
T ss_pred hHHHHHH-HHHHHHhCCCCcEEEEECCCCCCChHHHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHhCCcceee-cCeE
Confidence 5666654 9999999999999999999999999985 557899999864 4688889999999886 9999886 5887
Q ss_pred E
Q psy18009 138 V 138 (277)
Q Consensus 138 v 138 (277)
.
T Consensus 930 ~ 930 (1022)
T 2o8b_B 930 A 930 (1022)
T ss_dssp E
T ss_pred E
Confidence 6
No 127
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=98.92 E-value=7.7e-10 Score=110.01 Aligned_cols=63 Identities=41% Similarity=0.689 Sum_probs=57.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAI 211 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~ 211 (277)
.+|+||||||||+++|.|+++|++|+|.++|++++..+...+++.|+|||||+.+|+.|+...
T Consensus 374 ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~en 436 (587)
T 3qf4_A 374 VLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKEN 436 (587)
T ss_dssp EECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHH
T ss_pred EECCCCCCHHHHHHHHhCCccCCCcEEEECCEEcccCCHHHHHhheEEECCCCcCcCccHHHH
Confidence 479999999999999999999999999999999998888888889999999998888887643
No 128
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=98.91 E-value=3.2e-11 Score=115.55 Aligned_cols=92 Identities=12% Similarity=0.179 Sum_probs=73.3
Q ss_pred HHhhcccCcccccCCeeeccCHH--HHHHHHHHHHhcc----------CCCEEEEecCCCCCCHHHHHHHHHHHHHHh--
Q psy18009 43 RAILKNISFTVPAGKTLALLSGG--EKQRVAIARTLLK----------APQIVLLDEATSALDTKTERNIQSALNRVC-- 108 (277)
Q Consensus 43 ~~vL~~l~l~i~~~~~v~~LSgG--qrQrv~IAral~~----------~p~ilILDEPTa~LD~~~~~~l~~~l~~l~-- 108 (277)
.++|+.+++.-. +..+. ||+| |+||++||++|.. +|++++|||||++||+..++.+.+.++++.
T Consensus 138 ~~~L~~~~L~~~-~~~~~-lS~G~~~kqrv~la~aL~~~~~p~~lV~tkpdlllLDEPtsgLD~~~~~~l~~~l~~l~~~ 215 (413)
T 1tq4_A 138 DTYLEKMKFYEY-DFFII-ISATRFKKNDIDIAKAISMMKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVN 215 (413)
T ss_dssp HHHHHHTTGGGC-SEEEE-EESSCCCHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcc-CCeEE-eCCCCccHHHHHHHHHHHhcCCCeEEEEecCcccccCcccccCCHHHHHHHHHHHHHHHHH
Confidence 567888887533 33344 9999 9999999999999 999999999999999999999999999874
Q ss_pred ---cC----ce-EEEEecCcch--hcc-CceEE-EeeCcE
Q psy18009 109 ---AS----RT-TIIVAHRLST--IIH-ADEIL-VMHAGE 136 (277)
Q Consensus 109 ---~~----~t-iIiIsH~l~e--v~~-~Drv~-vL~dG~ 136 (277)
+. .+ +++.||.+++ +.. ||++. .|..|.
T Consensus 216 ~l~~~g~~~~~iiliSsh~l~~~~~e~L~d~I~~~Lpeg~ 255 (413)
T 1tq4_A 216 TFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPIYK 255 (413)
T ss_dssp HHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHSCGGG
T ss_pred HHHhcCCCCCcEEEEecCcCCccCHHHHHHHHHHhCccch
Confidence 21 24 5558899988 666 88885 455554
No 129
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=98.86 E-value=4.8e-09 Score=94.60 Aligned_cols=77 Identities=16% Similarity=0.206 Sum_probs=58.4
Q ss_pred eccCHHH-HHHHHHHHHhccCCCEEEEecCCC---C---CCH-HHHHHHHHHHHHHhc--CceEEEEecCc--c------
Q psy18009 60 ALLSGGE-KQRVAIARTLLKAPQIVLLDEATS---A---LDT-KTERNIQSALNRVCA--SRTTIIVAHRL--S------ 121 (277)
Q Consensus 60 ~~LSgGq-rQrv~IAral~~~p~ilILDEPTa---~---LD~-~~~~~l~~~l~~l~~--~~tiIiIsH~l--~------ 121 (277)
..+|.++ +|++. |+++..+|++||+||||+ + +|. .....+.+.|+++++ +.++|++||.. +
T Consensus 128 ~~~~~~~l~~~~~-a~~~~~~p~llilDept~~~~~~~~~d~~~~~~~i~~~L~~la~~~~~~vi~vsh~~r~~~~~~~~ 206 (296)
T 1cr0_A 128 AEAETDRLLAKLA-YMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICHLKNPDKGKAHE 206 (296)
T ss_dssp CSCCHHHHHHHHH-HHHHTTCCSEEEEEEEC-----------CHHHHHHHHHHHHHHHHHCCEEEEEEECC---------
T ss_pred CCCCHHHHHHHHH-HHHHhcCCCEEEEcCccccCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEEecCccccccccc
Confidence 5678888 67777 999999999999999999 4 455 666788888988854 56888899995 4
Q ss_pred --------------hhcc-CceEEEeeCcEE
Q psy18009 122 --------------TIIH-ADEILVMHAGEI 137 (277)
Q Consensus 122 --------------ev~~-~Drv~vL~dG~i 137 (277)
.+.. ||+|++|++|+.
T Consensus 207 ~~~~p~l~dl~~s~~i~~~aD~vi~L~~~~~ 237 (296)
T 1cr0_A 207 EGRPVSITDLRGSGALRQLSDTIIALERNQQ 237 (296)
T ss_dssp --------CCC---CHHHHCSEEEEEEEC--
T ss_pred cCCCCCHHHhcccHHhHhhCcEEEEEecCcc
Confidence 5555 999999999875
No 130
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=98.85 E-value=2.3e-09 Score=111.70 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=65.1
Q ss_pred hhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHH-HHHHHHhc--CceEEEEecCcc
Q psy18009 45 ILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQ-SALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 45 vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~-~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++..+++.-......+.+|+|++|++.|+++ +.+|+++||||||+|||+.+...+. .+++.+.+ +.++|++||+++
T Consensus 719 i~~~ig~~d~l~~~~stfs~em~~~~~il~~-a~~p~LlLLDEP~~GlD~~~~~~i~~~il~~L~~~~g~tvl~vTH~~e 797 (918)
T 3thx_B 719 IFTRMGAADNIYKGRSTFMEELTDTAEIIRK-ATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPP 797 (918)
T ss_dssp EEEEC----------CCHHHHHHHHHHHHHH-CCTTCEEEEESTTTTSCHHHHHHHHHHHHHHHHHTTCCEEEEECSCGG
T ss_pred HHHhCChHHHHHHhHHHhhHHHHHHHHHHHh-ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEeCcHH
Confidence 4455555544555567799999999999999 8999999999999999999999987 77887743 568888999987
Q ss_pred hhccCceEEE-eeCcEE
Q psy18009 122 TIIHADEILV-MHAGEI 137 (277)
Q Consensus 122 ev~~~Drv~v-L~dG~i 137 (277)
....||+.-- +.++.+
T Consensus 798 l~~l~~~~~~~v~n~~~ 814 (918)
T 3thx_B 798 VCELEKNYSHQVGNYHM 814 (918)
T ss_dssp GGGHHHHTTTTEEEEEE
T ss_pred HHHHHhhcccceEEEEE
Confidence 6654665431 344444
No 131
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=98.78 E-value=8e-09 Score=90.91 Aligned_cols=49 Identities=22% Similarity=0.387 Sum_probs=43.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|+|+.+|++|+|.++| .|+|+||++.+++.|+..
T Consensus 39 i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g-------------~i~~v~q~~~~~~~tv~e 87 (229)
T 2pze_A 39 VAGSTGAGKTSLLMMIMGELEPSEGKIKHSG-------------RISFCSQFSWIMPGTIKE 87 (229)
T ss_dssp EECCTTSSHHHHHHHHTTSSCCSEEEEEECS-------------CEEEECSSCCCCSBCHHH
T ss_pred EECCCCCCHHHHHHHHhCCCcCCccEEEECC-------------EEEEEecCCcccCCCHHH
Confidence 4799999999999999999999999999998 399999998666656654
No 132
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=98.77 E-value=5.5e-09 Score=92.47 Aligned_cols=49 Identities=33% Similarity=0.548 Sum_probs=43.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|+|+.+|++|+|.++| .|+||||++.+++.|+..
T Consensus 36 i~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g-------------~i~~v~Q~~~~~~~tv~e 84 (237)
T 2cbz_A 36 VVGQVGCGKSSLLSALLAEMDKVEGHVAIKG-------------SVAYVPQQAWIQNDSLRE 84 (237)
T ss_dssp EECSTTSSHHHHHHHHTTCSEEEEEEEEECS-------------CEEEECSSCCCCSEEHHH
T ss_pred EECCCCCCHHHHHHHHhcCCCCCCceEEECC-------------EEEEEcCCCcCCCcCHHH
Confidence 4799999999999999999999999999998 399999998777767654
No 133
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=98.70 E-value=6.9e-10 Score=106.94 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=61.6
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc---C-c------eEEEEecCcchhccCceEEE
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA---S-R------TTIIVAHRLSTIIHADEILV 131 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~---~-~------tiIiIsH~l~ev~~~Drv~v 131 (277)
||+|| |||+|| +.+|++ |++||+.....+.++++++.+ + + |++++||+++ ...||++++
T Consensus 259 lS~g~-qrvslA---l~~p~~------t~glD~~~~~~l~~ll~r~~~~~~~~GsiT~~~tVlv~tHdl~-~~iad~v~~ 327 (438)
T 2dpy_A 259 YAMAQ-REIALA---IGEPPA------TKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQ-DPIADSARA 327 (438)
T ss_dssp HHHHH-HHHHHH---TTCCCC------SSSCCTTHHHHHHHHHTTCSCCSTTSCEEEEEEEEECSSSCSC-CHHHHHHHH
T ss_pred HHHHH-HHHHHH---hCCCcc------cccCCHHHHHHHHHHHHHHHhccCCCCcccceeEEEEeCCCcc-chhhceEEE
Confidence 79999 999998 788887 999999999999999999865 2 5 6677999999 345999999
Q ss_pred eeCcEEEEecCc
Q psy18009 132 MHAGEIVERGSL 143 (277)
Q Consensus 132 L~dG~iv~~g~~ 143 (277)
|.||+++..+++
T Consensus 328 l~dG~Ivl~~~~ 339 (438)
T 2dpy_A 328 ILDGHIVLSRRL 339 (438)
T ss_dssp HSSEEEEECHHH
T ss_pred EeCcEEEEeCCH
Confidence 999999987664
No 134
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=98.69 E-value=2.4e-08 Score=85.22 Aligned_cols=75 Identities=19% Similarity=0.140 Sum_probs=60.7
Q ss_pred cCHHHHHHHHHHHHhccCCC--EEEEecCCCCC--CHHHHHHHHHHHHHHhc--CceEEEEecCc--------chhcc-C
Q psy18009 62 LSGGEKQRVAIARTLLKAPQ--IVLLDEATSAL--DTKTERNIQSALNRVCA--SRTTIIVAHRL--------STIIH-A 126 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~--ilILDEPTa~L--D~~~~~~l~~~l~~l~~--~~tiIiIsH~l--------~ev~~-~ 126 (277)
.|.++.++...+.+...+|+ ++|+||||+.+ |+.....+++.++++.+ +.++|+++|.+ ..+.. |
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~llilDe~~~~~~~d~~~~~~~~~~l~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~ 183 (235)
T 2w0m_A 104 LTPEELVNKVIEAKQKLGYGKARLVIDSVSALFLDKPAMARKISYYLKRVLNKWNFTIYATSQYAITTSQAFGFGVEHVA 183 (235)
T ss_dssp CCHHHHHHHHHHHHHHHCSSCEEEEEETGGGGSSSCGGGHHHHHHHHHHHHHHTTEEEEEEEC-----------CHHHHC
T ss_pred CCHHHHHHHHHHHHHhhCCCceEEEEECchHhhcCCHHHHHHHHHHHHHHHHhCCCeEEEEeccCcccccccccchheee
Confidence 48899888887777778999 99999999888 99888999999998853 45888899999 44666 9
Q ss_pred ceEEEeeCcE
Q psy18009 127 DEILVMHAGE 136 (277)
Q Consensus 127 Drv~vL~dG~ 136 (277)
|+|++|+...
T Consensus 184 d~vi~l~~~~ 193 (235)
T 2w0m_A 184 DGIIRFRRMI 193 (235)
T ss_dssp SEEEEEEEEE
T ss_pred eEEEEEEEEe
Confidence 9999998653
No 135
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=98.65 E-value=1.8e-08 Score=87.28 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHhccCCCEEEEecCCCCCC-----HHHHHHHHHHHHHHhc-CceEEEEecCcchh---------cc-C
Q psy18009 63 SGGEKQRVAIARTLLKAPQIVLLDEATSALD-----TKTERNIQSALNRVCA-SRTTIIVAHRLSTI---------IH-A 126 (277)
Q Consensus 63 SgGqrQrv~IAral~~~p~ilILDEPTa~LD-----~~~~~~l~~~l~~l~~-~~tiIiIsH~l~ev---------~~-~ 126 (277)
+..+.........-..+|++++|||||++|| +...+.+.++++.+++ +.|+|++||+++++ .. |
T Consensus 119 ~~~~~~~~~~~~l~~~~p~~lilDep~~~ld~~~d~~~~~~~l~~l~~~l~~~g~tii~vtH~~~~~~~~~~~~~i~~~~ 198 (251)
T 2ehv_A 119 NVDNFLRYIYRVVKAINAKRLVIDSIPSIALRLEEERKIREVLLKLNTILLEMGVTTILTTEAPDPQHGKLSRYGIEEFI 198 (251)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECHHHHHHHSSSGGGHHHHHHHHHHHHHHHCCEEEEEECCC----CCSSSSSCGGGG
T ss_pred cHHHHHHHHHHHHHhhCCCEEEEccHHHHHhhcCCHHHHHHHHHHHHHHHHHCCCeEEEEECCCCCCcccccccChhhEe
Confidence 3444444444444458999999999999997 6667779999998865 56888899999987 44 7
Q ss_pred -ceEEEeeC
Q psy18009 127 -DEILVMHA 134 (277)
Q Consensus 127 -Drv~vL~d 134 (277)
|++++|++
T Consensus 199 aD~vi~l~~ 207 (251)
T 2ehv_A 199 ARGVIVLDL 207 (251)
T ss_dssp CSEEEEEEE
T ss_pred eeEEEEEee
Confidence 99999963
No 136
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=98.64 E-value=1.8e-08 Score=91.99 Aligned_cols=49 Identities=22% Similarity=0.432 Sum_probs=42.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~ 210 (277)
.+|+||||||||+++|+|+.+|++|+|.++| .|+|+||++.+++.|+..
T Consensus 69 i~G~NGsGKSTLlk~l~Gl~~p~~G~I~~~g-------------~i~~v~Q~~~l~~~tv~e 117 (290)
T 2bbs_A 69 VAGSTGAGKTSLLMMIMGELEPSEGKIKHSG-------------RISFCSQNSWIMPGTIKE 117 (290)
T ss_dssp EEESTTSSHHHHHHHHTTSSCEEEEEEECCS-------------CEEEECSSCCCCSSBHHH
T ss_pred EECCCCCcHHHHHHHHhcCCCCCCcEEEECC-------------EEEEEeCCCccCcccHHH
Confidence 4799999999999999999999999999998 399999998666556643
No 137
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.59 E-value=2.4e-10 Score=98.15 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=51.8
Q ss_pred HhccCCCEEEEecCCCCC----CHHHHHHHHHHHHHHhc--CceEEEEecCcchhcc-CceEEEee
Q psy18009 75 TLLKAPQIVLLDEATSAL----DTKTERNIQSALNRVCA--SRTTIIVAHRLSTIIH-ADEILVMH 133 (277)
Q Consensus 75 al~~~p~ilILDEPTa~L----D~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ev~~-~Drv~vL~ 133 (277)
+|+.+|++++|||||+++ |+..++++.+.++++++ +.++|++||+++++.. ||||++|.
T Consensus 137 ~l~~~p~~~~LDep~~~l~~~~d~~~~~~l~~~l~~l~~~~g~tvi~vtHdl~~~~~~~d~i~~l~ 202 (207)
T 1znw_A 137 VFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGT 202 (207)
T ss_dssp EEEECSCHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHGGGGSSEEEECSSHHHHHHHHHHHHC--
T ss_pred EEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhccCcEEEECCCHHHHHHHHHHHHHhc
Confidence 788999999999999998 78899999999999964 4589999999999986 99999984
No 138
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=98.57 E-value=4.9e-08 Score=87.40 Aligned_cols=75 Identities=5% Similarity=0.113 Sum_probs=56.2
Q ss_pred hcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCC--CCCHHH---HHHHHHHHHHHh-c-CceEEEEec
Q psy18009 46 LKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATS--ALDTKT---ERNIQSALNRVC-A-SRTTIIVAH 118 (277)
Q Consensus 46 L~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa--~LD~~~---~~~l~~~l~~l~-~-~~tiIiIsH 118 (277)
++.+.+.-..+..+..||+|++|++ ++++.+|+++|+||||+ ++|+.. ...+++.|+++. + +.++|+++|
T Consensus 103 ~~~l~l~~~~~~~~~~ls~g~~~~i---~~l~~~~~livlDe~~~~~~~d~~~~~~~~~~~~~L~~l~~~~g~tvi~i~H 179 (279)
T 1nlf_A 103 ADGLLIQPLIGSLPNIMAPEWFDGL---KRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHH 179 (279)
T ss_dssp HHHEEECCCTTSCCCTTSHHHHHHH---HHHHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred cCceEEeecCCCCcccCCHHHHHHH---HHhcCCCCEEEECCHHHhcCCCcCchHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 4556655455678889999998765 68888999999999999 998744 477888888874 3 568888999
Q ss_pred Ccchh
Q psy18009 119 RLSTI 123 (277)
Q Consensus 119 ~l~ev 123 (277)
.....
T Consensus 180 ~~~~~ 184 (279)
T 1nlf_A 180 ASKGA 184 (279)
T ss_dssp C----
T ss_pred CCCcc
Confidence 88665
No 139
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=98.52 E-value=2.2e-07 Score=78.92 Aligned_cols=77 Identities=13% Similarity=0.108 Sum_probs=57.9
Q ss_pred eeccCHHH--HHHHHHHHHhccC-CCEEEEecCCCCCCHH--------HHHHHHHHHHHHhc--CceEEEEecCcc----
Q psy18009 59 LALLSGGE--KQRVAIARTLLKA-PQIVLLDEATSALDTK--------TERNIQSALNRVCA--SRTTIIVAHRLS---- 121 (277)
Q Consensus 59 v~~LSgGq--rQrv~IAral~~~-p~ilILDEPTa~LD~~--------~~~~l~~~l~~l~~--~~tiIiIsH~l~---- 121 (277)
+..++.++ +|+++.+++++.+ |+++|+||||+.+|+. +...+++.|+++.+ +.++|+++|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~lliiD~~~~~l~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~vi~~~h~~~~~~~ 161 (220)
T 2cvh_A 82 LFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVIVINQVHFDSRT 161 (220)
T ss_dssp EECCTTTSHHHHHHHHHHHHCCTTEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEEEEECSSSSCTT
T ss_pred EEecCCHHHHHHHHHHHHHHhhcCCCEEEEcCcHHHhhhcCchHHHHHHHHHHHHHHHHHHHHcCCEEEEEeeEEEcCCC
Confidence 44556654 5788889999986 9999999999999973 33445666777654 568888999876
Q ss_pred ---------hhcc-CceEEEeeCc
Q psy18009 122 ---------TIIH-ADEILVMHAG 135 (277)
Q Consensus 122 ---------ev~~-~Drv~vL~dG 135 (277)
.+.. ||++++|+..
T Consensus 162 ~~~~p~~~~~~~~~~d~vi~l~~~ 185 (220)
T 2cvh_A 162 EMTKPVAEQTLGYRCKDILRLDKL 185 (220)
T ss_dssp SSCCSCCCHHHHHTSSEEEEEEEC
T ss_pred CccccCCCcceeecCcEEEEEEEe
Confidence 3445 9999999764
No 140
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=98.52 E-value=1.6e-08 Score=92.84 Aligned_cols=82 Identities=16% Similarity=0.205 Sum_probs=61.0
Q ss_pred hcccCcccccCCeeeccCHHHHHHHHHHHHhccCCC--EEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 46 LKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQ--IVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 46 L~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~--ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++.+|+.-..++++..|| |||++||||++.+|+ +|+|| ||++||+... ++++.+ +.++|++|| ++
T Consensus 189 ldt~gl~~~~~~~~~eLS---kqr~~iaral~~~P~e~lLvLD-ptsglD~~~~------~~~~~~~~g~t~iiiTh-lD 257 (302)
T 3b9q_A 189 CDTSGRLHTNYSLMEELI---ACKKAVGKIVSGAPNEILLVLD-GNTGLNMLPQ------AREFNEVVGITGLILTK-LD 257 (302)
T ss_dssp ECCCCCSSCCHHHHHHHH---HHHHHHHTTSTTCCSEEEEEEE-GGGGGGGHHH------HHHHHHHTCCCEEEEEC-CS
T ss_pred HhcCCCCcchhHHHHHHH---HHHHHHHHhhccCCCeeEEEEe-CCCCcCHHHH------HHHHHHhcCCCEEEEeC-CC
Confidence 444555434445566789 999999999999999 99999 9999999854 234432 458899999 44
Q ss_pred h----------hcc-CceEEEeeCcEEE
Q psy18009 122 T----------IIH-ADEILVMHAGEIV 138 (277)
Q Consensus 122 e----------v~~-~Drv~vL~dG~iv 138 (277)
+ +.. .+.|.++..|+.+
T Consensus 258 ~~~~~g~~l~~~~~~~~pi~~i~~Ge~~ 285 (302)
T 3b9q_A 258 GSARGGCVVSVVEELGIPVKFIGVGEAV 285 (302)
T ss_dssp SCSCTHHHHHHHHHHCCCEEEEECSSSG
T ss_pred CCCccChheehHHHHCCCEEEEeCCCCh
Confidence 3 223 6788999999764
No 141
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=98.42 E-value=1.4e-08 Score=94.91 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=58.4
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--Cc------eEEEEecCcchhccCceEEEee
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SR------TTIIVAHRLSTIIHADEILVMH 133 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~------tiIiIsH~l~ev~~~Drv~vL~ 133 (277)
||+|| |+|++| +.+|++ |++||+.....+.++++++.. +| |++++||+++ -..||++.+|.
T Consensus 172 lS~g~-r~v~la---l~~p~~------t~Gldp~~~~~l~~ller~~~~~~GsiT~~~tVl~~thdl~-~~i~d~v~~i~ 240 (347)
T 2obl_A 172 YARAA-RDVGLA---SGEPDV------RGGFPPSVFSSLPKLLERAGPAPKGSITAIYTVLLESDNVN-DPIGDEVRSIL 240 (347)
T ss_dssp HHHHH-HHHHHH---TTCCCC------BTTBCHHHHHHHHHHHTTCEECSSSEEEEEEEEECCSSCCC-CHHHHHHHHHC
T ss_pred HHHHH-HHHHHH---cCCCCc------ccCCCHHHHHHHHHHHHHHhCCCCCCeeeEEEEEEeCCCCC-ChhhhheEEee
Confidence 68888 788888 466666 899999999999999999863 34 4566999999 22499999999
Q ss_pred CcEEEEecCc
Q psy18009 134 AGEIVERGSL 143 (277)
Q Consensus 134 dG~iv~~g~~ 143 (277)
+|+++.+++.
T Consensus 241 dG~Ivl~~~l 250 (347)
T 2obl_A 241 DGHIVLTREL 250 (347)
T ss_dssp SEEEEBCHHH
T ss_pred CcEEEEeCCH
Confidence 9999987764
No 142
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=98.41 E-value=1.2e-07 Score=97.69 Aligned_cols=80 Identities=10% Similarity=0.056 Sum_probs=61.0
Q ss_pred eccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHH-HHHHHHHhc--CceEEEEecCcchhccCceEEEeeCcE
Q psy18009 60 ALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI-QSALNRVCA--SRTTIIVAHRLSTIIHADEILVMHAGE 136 (277)
Q Consensus 60 ~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l-~~~l~~l~~--~~tiIiIsH~l~ev~~~Drv~vL~dG~ 136 (277)
..+|+++++...| ...+.+|+++|||||++|+|+.+...+ ..+++.+.+ +.++|++||+++....||++..+++|+
T Consensus 668 stf~~e~~~~~~i-l~~a~~psLlLLDEp~~Gtd~~d~~~i~~~ll~~l~~~~g~~vl~~TH~~el~~l~d~~~~v~n~~ 746 (800)
T 1wb9_A 668 STFMVEMTETANI-LHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVH 746 (800)
T ss_dssp --CHHHHHHHHHH-HHHCCTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEECSCGGGGGHHHHSTTEEEEE
T ss_pred hhhhHHHHHHHHH-HHhccCCCEEEEECCCCCCChhHHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHHhhhhhceEEEE
Confidence 4467777654444 345889999999999999999888775 788888865 468888999987655589888888888
Q ss_pred EEEe
Q psy18009 137 IVER 140 (277)
Q Consensus 137 iv~~ 140 (277)
+...
T Consensus 747 ~~~~ 750 (800)
T 1wb9_A 747 LDAL 750 (800)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7643
No 143
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=98.40 E-value=1.8e-07 Score=95.93 Aligned_cols=64 Identities=25% Similarity=0.197 Sum_probs=54.3
Q ss_pred ccCHHHHHHHHHHHHh--ccCCCEEEEecC---CCCCCHHHH-HHHHHHHHHHhcCceEEEEecCcchhccC
Q psy18009 61 LLSGGEKQRVAIARTL--LKAPQIVLLDEA---TSALDTKTE-RNIQSALNRVCASRTTIIVAHRLSTIIHA 126 (277)
Q Consensus 61 ~LSgGqrQrv~IAral--~~~p~ilILDEP---Ta~LD~~~~-~~l~~~l~~l~~~~tiIiIsH~l~ev~~~ 126 (277)
.+|++++|++++++++ +.+|+++||||| |++||+... ..+.+.+.+ .+.++|++||+.+....+
T Consensus 635 g~S~~~~e~~~la~il~~a~~p~LlLLDEpgrGTs~lD~~~~~~~i~~~L~~--~g~~vl~~TH~~~l~~~~ 704 (765)
T 1ewq_A 635 GKSTFMVEMEEVALILKEATENSLVLLDEVGRGTSSLDGVAIATAVAEALHE--RRAYTLFATHYFELTALG 704 (765)
T ss_dssp CCSHHHHHHHHHHHHHHHCCTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHH--HTCEEEEECCCHHHHTCC
T ss_pred cccHHHHHHHHHHHHHHhccCCCEEEEECCCCCCCCcCHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHhh
Confidence 3799999999999999 999999999999 999998876 467777766 467889999998776544
No 144
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=98.36 E-value=2.6e-07 Score=78.88 Aligned_cols=75 Identities=15% Similarity=0.239 Sum_probs=51.1
Q ss_pred cCHHH-HHHHHHHHHhcc-------CCCEEEEecCCCCCCHH-------H-----HHHHHHHHHHHhc--CceEEEEecC
Q psy18009 62 LSGGE-KQRVAIARTLLK-------APQIVLLDEATSALDTK-------T-----ERNIQSALNRVCA--SRTTIIVAHR 119 (277)
Q Consensus 62 LSgGq-rQrv~IAral~~-------~p~ilILDEPTa~LD~~-------~-----~~~l~~~l~~l~~--~~tiIiIsH~ 119 (277)
++.++ ++.+..+++++. +|++++|||||+.+|+. . ...+++.+.++.+ +.|+|++||.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llilDe~~~~l~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~g~tvi~vtH~ 179 (231)
T 4a74_A 100 FNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTNQV 179 (231)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTSSSCEEEEEEETSSHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred CChHHHHHHHHHHHHHHHHhcccCCceeEEEECChHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHCCCeEEEEeec
Confidence 45444 344666666655 99999999999999983 1 2356667766643 5688889996
Q ss_pred cch----hcc-CceEEEeeCcE
Q psy18009 120 LST----IIH-ADEILVMHAGE 136 (277)
Q Consensus 120 l~e----v~~-~Drv~vL~dG~ 136 (277)
+++ +.. ||++++|++|+
T Consensus 180 ~~~~g~~~~~~~d~~l~l~~~~ 201 (231)
T 4a74_A 180 QANGGHILAHSATLRVYLRKGK 201 (231)
T ss_dssp C---------CCSEEEEEEECT
T ss_pred ccCcchhhHhhceEEEEEEecC
Confidence 665 766 99999998753
No 145
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=98.36 E-value=9.3e-08 Score=89.92 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=60.4
Q ss_pred hcccCcccccCCeeeccCHHHHHHHHHHHHhccCCC--EEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 46 LKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQ--IVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 46 L~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~--ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++.+|+.-..++.+..|| +||++||||++.+|+ +|+|| ||++||+.... +.+.+ +.++|++|| ++
T Consensus 246 ldt~Gl~~~~~~~~~eLS---kqr~~iaral~~~P~e~lLvLD-pttglD~~~~~------~~~~~~~g~t~iiiTh-lD 314 (359)
T 2og2_A 246 CDTSGRLHTNYSLMEELI---ACKKAVGKIVSGAPNEILLVLD-GNTGLNMLPQA------REFNEVVGITGLILTK-LD 314 (359)
T ss_dssp EECCCCSSCCHHHHHHHH---HHHHHHHHHSTTCCSEEEEEEE-GGGGGGGHHHH------HHHHHHTCCCEEEEES-CT
T ss_pred HHhcCCChhhhhHHHHHH---HHHHHHHHHHhcCCCceEEEEc-CCCCCCHHHHH------HHHHHhcCCeEEEEec-Cc
Confidence 444454433444566788 999999999999999 99999 99999988653 33432 468899999 44
Q ss_pred h----------hcc-CceEEEeeCcEEE
Q psy18009 122 T----------IIH-ADEILVMHAGEIV 138 (277)
Q Consensus 122 e----------v~~-~Drv~vL~dG~iv 138 (277)
+ ... ++.|..+..|+.+
T Consensus 315 ~~~~gG~~lsi~~~~~~pI~~ig~Ge~~ 342 (359)
T 2og2_A 315 GSARGGCVVSVVEELGIPVKFIGVGEAV 342 (359)
T ss_dssp TCSCTHHHHHHHHHHCCCEEEEECSSSG
T ss_pred ccccccHHHHHHHHhCCCEEEEeCCCCh
Confidence 3 233 6788888888764
No 146
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=98.35 E-value=5.2e-08 Score=87.89 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=50.4
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhc
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTII 124 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~ 124 (277)
+.....||||||||++||||++. +++||||+++||+.. .++++.+.+..++|++.|+.+.+.
T Consensus 93 ~~~~~~LS~G~~qrv~iaRal~~---lllldep~~gL~~lD----~~~l~~L~~~~~vI~Vi~K~D~lt 154 (270)
T 3sop_A 93 KFLKEEVNIARKKRIPDTRVHCC---LYFISPTGHSLRPLD----LEFMKHLSKVVNIIPVIAKADTMT 154 (270)
T ss_dssp HHHHHHSCTTCCSSCCCCSCCEE---EEEECCCSSSCCHHH----HHHHHHHHTTSEEEEEETTGGGSC
T ss_pred hhhHHhcCcccchhhhhheeeee---eEEEecCCCcCCHHH----HHHHHHHHhcCcEEEEEeccccCC
Confidence 34556799999999999999886 999999999999988 455566655578888888887653
No 147
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=98.28 E-value=2.6e-09 Score=92.89 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=45.7
Q ss_pred eccCHHHHHHHHH-----HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC
Q psy18009 60 ALLSGGEKQRVAI-----ARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110 (277)
Q Consensus 60 ~~LSgGqrQrv~I-----Aral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~ 110 (277)
..|||||+||++| +++++.+|++++|||||+++|..+.+.+.+.+.++.++
T Consensus 121 ~~lsggq~qR~~i~~~~~~~~ll~~~~~~~Lde~~~~~d~~~~~~i~~~l~~~~~~ 176 (218)
T 1z6g_A 121 MNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIE 176 (218)
T ss_dssp ECHHHHHHHTTCSSCCSCEEEEEECSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHhcCCCcEEEEEeCcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999 89999999999999999999999888888888776543
No 148
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=98.28 E-value=4.2e-08 Score=84.05 Aligned_cols=83 Identities=11% Similarity=0.143 Sum_probs=59.7
Q ss_pred cCCeeeccCHHHHHHH-HHHH---HhccCCCEEEEec--CCCCCCHHHHHHHHHHHHHHhcCceEE---EEecCcchhcc
Q psy18009 55 AGKTLALLSGGEKQRV-AIAR---TLLKAPQIVLLDE--ATSALDTKTERNIQSALNRVCASRTTI---IVAHRLSTIIH 125 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv-~IAr---al~~~p~ilILDE--PTa~LD~~~~~~l~~~l~~l~~~~tiI---iIsH~l~ev~~ 125 (277)
.+++...+|+|||+++ ++++ |+..+|++||||| |+..+|+...+.+.+++.. ...+++ .+||+.+ ...
T Consensus 77 v~~~~~~ls~~er~~~~~l~~~a~A~~~~~dvlilDE~g~~~~~~~~~~~~l~~~l~~--~~~~ilgti~vsh~~~-~~~ 153 (189)
T 2i3b_A 77 VGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLST--PGTIILGTIPVPKGKP-LAL 153 (189)
T ss_dssp SSSSEECHHHHHTTTTTTTCCCCCCCSSCCCCEEECCCSTTTTTCSHHHHHHHHHHHC--SSCCEEEECCCCCSSC-CTT
T ss_pred cceEEEcchHHHHHHHHHHhhhhHhhccCCCEEEEeCCCccccccHHHHHHHHHHHhC--CCcEEEEEeecCCCCc-hHH
Confidence 4566778999999988 4444 5789999999999 8888998766666555542 123342 2559875 334
Q ss_pred CceEEEeeCcEEEEe
Q psy18009 126 ADEILVMHAGEIVER 140 (277)
Q Consensus 126 ~Drv~vL~dG~iv~~ 140 (277)
+|||..+.+|+++.-
T Consensus 154 vd~i~~~~~~~i~~~ 168 (189)
T 2i3b_A 154 VEEIRNRKDVKVFNV 168 (189)
T ss_dssp HHHHHTTCCSEEEEC
T ss_pred HHHHeecCCcEEEEe
Confidence 788888888988763
No 149
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=98.23 E-value=1.7e-07 Score=84.55 Aligned_cols=51 Identities=31% Similarity=0.418 Sum_probs=30.7
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
..+|+||||||||+++|+|+.++.+|+|.++|+++... ..+++++|+||++
T Consensus 6 ~lvG~nGaGKSTLln~L~g~~~~~~G~i~~~g~~i~~~---~~~~~i~~v~q~~ 56 (270)
T 3sop_A 6 MVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKT---VEIKAIGHVIEEG 56 (270)
T ss_dssp EEEESSSSSHHHHHHHHHHHHC------------CCCC---CSCCEEEESCC--
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCCCccccCCcccCcc---eeeeeeEEEeecC
Confidence 45799999999999999999999999999999877432 2356799999984
No 150
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=98.22 E-value=4.3e-09 Score=97.01 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=60.6
Q ss_pred hhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecCcchh
Q psy18009 45 ILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRLSTI 123 (277)
Q Consensus 45 vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~l~ev 123 (277)
.|+.++ .-..+..+..||+||+||+++|++++.+|+|||||||++.+|+.. ..+.+- ..+|+|+|+.+..
T Consensus 161 ~L~~l~-~~~~~~~~~~lS~G~~qRv~~a~al~~~p~ilIlDep~~~~d~~~--------~~l~~~~D~~I~V~a~~~~~ 231 (312)
T 3aez_A 161 FVTSVK-SGSDYACAPVYSHLHYDIIPGAEQVVRHPDILILEGLNVLQTGPT--------LMVSDLFDFSLYVDARIEDI 231 (312)
T ss_dssp HHHHHH-TTCSCEEEEEEETTTTEEEEEEEEEECSCSEEEEECTTTTCCCSS--------CCGGGGCSEEEEEEECHHHH
T ss_pred HHHHhC-CCcccCCcccCChhhhhhhhhHHHhccCCCEEEECCccccCCcch--------HHHHHhcCcEEEEECCHHHH
Confidence 445554 222345678899999999999999999999999999999998521 112221 3567788888765
Q ss_pred c-c-CceEEEeeCcE
Q psy18009 124 I-H-ADEILVMHAGE 136 (277)
Q Consensus 124 ~-~-~Drv~vL~dG~ 136 (277)
. . .+|...+++|.
T Consensus 232 ~~R~i~R~~~~rd~~ 246 (312)
T 3aez_A 232 EQWYVSRFLAMRTTA 246 (312)
T ss_dssp HHHHHHHHHHHTTTG
T ss_pred HHHHHHHHHHHHhcc
Confidence 4 3 78887777765
No 151
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=98.17 E-value=7.2e-07 Score=79.99 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=48.1
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeC
Q psy18009 69 RVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHA 134 (277)
Q Consensus 69 rv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~d 134 (277)
+++||++|..+|++|+||||| |+++...++ +....+.++++++|+.+....|||+++|..
T Consensus 88 ~~~la~aL~~~p~illlDEp~---D~~~~~~~l---~~~~~g~~vl~t~H~~~~~~~~dri~~l~~ 147 (261)
T 2eyu_A 88 ADALRAALREDPDVIFVGEMR---DLETVETAL---RAAETGHLVFGTLHTNTAIDTIHRIVDIFP 147 (261)
T ss_dssp HHHHHHHHHHCCSEEEESCCC---SHHHHHHHH---HHHHTTCEEEEEECCSSHHHHHHHHHHTSC
T ss_pred HHHHHHHHhhCCCEEEeCCCC---CHHHHHHHH---HHHccCCEEEEEeCcchHHHHHHHHhhhcC
Confidence 899999999999999999999 888866544 334445688889999884434999988854
No 152
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=98.10 E-value=1.8e-06 Score=80.39 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhc-------cCCCEEEEecCCCCCCHHH------------HHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 63 SGGEKQRVAIARTLL-------KAPQIVLLDEATSALDTKT------------ERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 63 SgGqrQrv~IAral~-------~~p~ilILDEPTa~LD~~~------------~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
|.+++|+++++++++ .+|++||+||||+.+|+.. ...++..|.++.+ +.++|+++|...
T Consensus 208 ~~~~~~~l~~~~~~~~~lS~G~~~~~llIlDs~ta~ld~~~~~~~~~~~r~~~~~~~l~~L~~la~~~~~tvii~~h~~~ 287 (349)
T 1pzn_A 208 SNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTNQVQA 287 (349)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSSSCEEEEEEETSSTTHHHHCCSTTTHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEECC-
T ss_pred hHHHHHHHHHHHHHHHHhccccCCCCEEEEeCchHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHcCcEEEEEccccc
Confidence 678999999999998 6899999999999999852 3455555666543 458888999887
Q ss_pred hhcc-CceEEEeeCcEEEEecC
Q psy18009 122 TIIH-ADEILVMHAGEIVERGS 142 (277)
Q Consensus 122 ev~~-~Drv~vL~dG~iv~~g~ 142 (277)
.... ++...+...|++++.+.
T Consensus 288 ~~~~~~~~~~~~~~G~~l~~~~ 309 (349)
T 1pzn_A 288 RPDAFFGDPTRPIGGHILAHSA 309 (349)
T ss_dssp --------------CCCCCTTC
T ss_pred ccccccCCccccCCcceEeecC
Confidence 6543 34455666777665544
No 153
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=98.09 E-value=1.7e-07 Score=81.41 Aligned_cols=49 Identities=14% Similarity=0.243 Sum_probs=36.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
.+|+||||||||+++|+|+ +|++|+|. +..+.. +....++.|+|+||++
T Consensus 27 liG~nGsGKSTLl~~l~Gl-~p~~G~I~--~~~~~~-~~~~~~~~ig~v~q~~ 75 (208)
T 3b85_A 27 GLGPAGSGKTYLAMAKAVQ-ALQSKQVS--RIILTR-PAVEAGEKLGFLPGTL 75 (208)
T ss_dssp EECCTTSSTTHHHHHHHHH-HHHTTSCS--EEEEEE-CSCCTTCCCCSSCC--
T ss_pred EECCCCCCHHHHHHHHhcC-CCcCCeee--eEEecC-CchhhhcceEEecCCH
Confidence 3799999999999999999 99999984 333321 1123456799999987
No 154
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=97.98 E-value=2.3e-06 Score=80.20 Aligned_cols=59 Identities=22% Similarity=0.255 Sum_probs=46.4
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeCc
Q psy18009 71 AIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAG 135 (277)
Q Consensus 71 ~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~dG 135 (277)
+||+||..+|++|++|||| |++..+.+.+. ...+.++++++|..+.+..+||+++|..|
T Consensus 188 ~La~aL~~~PdvillDEp~---d~e~~~~~~~~---~~~G~~vl~t~H~~~~~~~~dRli~l~~~ 246 (356)
T 3jvv_A 188 ALRSALREDPDIILVGEMR---DLETIRLALTA---AETGHLVFGTLHTTSAAKTIDRVVDVFPA 246 (356)
T ss_dssp HHHHHTTSCCSEEEESCCC---SHHHHHHHHHH---HHTTCEEEEEESCSSHHHHHHHHHHTSCH
T ss_pred HHHHHhhhCcCEEecCCCC---CHHHHHHHHHH---HhcCCEEEEEEccChHHHHHHHHhhhcCc
Confidence 8999999999999999999 65554443333 23456888899999988559999998655
No 155
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=97.97 E-value=1.5e-06 Score=75.87 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=42.4
Q ss_pred hcCCCCCchhHHHHHHhccccC--ceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV--ESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN 206 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~ 206 (277)
.+|+||||||||+++|.|+.+| ..|.|.+.+++... ..+.+++|+||++..|..
T Consensus 21 l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~----~e~~gi~y~fq~~~~f~~ 76 (219)
T 1s96_A 21 VSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRP----GEVHGEHYFFVNHDEFKE 76 (219)
T ss_dssp EECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCT----TCCBTTTBEECCHHHHHH
T ss_pred EECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCc----ccccCceEEECCHHHHHH
Confidence 3799999999999999999985 67888887765421 235689999999765543
No 156
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=97.96 E-value=2.5e-06 Score=71.79 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=54.2
Q ss_pred hcccCcccc-cCCeeeccCHHHHHH-HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC
Q psy18009 46 LKNISFTVP-AGKTLALLSGGEKQR-VAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS 110 (277)
Q Consensus 46 L~~l~l~i~-~~~~v~~LSgGqrQr-v~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~ 110 (277)
++..++.+. ...++..+|+||+|+ ++++++++.+|+++++|||||++|+...+.+++.|.++...
T Consensus 133 ~~~~~~~~~~v~nK~D~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~Sal~~~~~~~l~~~l~~~~~~ 199 (210)
T 1pui_A 133 AVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSE 199 (210)
T ss_dssp HHHTTCCEEEEEECGGGSCHHHHHHHHHHHHHHHGGGCSCEEEEECBTTTTBSHHHHHHHHHHHHC-
T ss_pred HHHcCCCeEEEEecccCCCchhHHHHHHHHHHHHHhcCCCCceEEEeecCCCCHHHHHHHHHHHHhh
Confidence 444555432 366777899999999 89999999999989999999999999999999999987654
No 157
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=97.93 E-value=2.3e-06 Score=77.89 Aligned_cols=54 Identities=19% Similarity=0.163 Sum_probs=34.5
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEE---CCEeccCCcHHHHhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFI---DNQNIKTVSQASLRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~---~g~~~~~~~~~~~~~~i~~vpqd~~ 202 (277)
.+|+||+|||||+++|.|+.+|..|+|.+ +|+.+.........+.++||+|+|-
T Consensus 174 l~G~sG~GKSTll~~l~g~~~~~~G~i~~~~~~g~~~t~~~~~~~~~~~g~v~q~p~ 230 (301)
T 1u0l_A 174 MAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPG 230 (301)
T ss_dssp EECSTTSSHHHHHHHHSTTCCCC-------------CCCSCCEEECTTSCEEESSCS
T ss_pred EECCCCCcHHHHHHHhcccccccccceecccCCCCCceeeeEEEEcCCCCEEEECcC
Confidence 46999999999999999999999999999 8988765432111236899999974
No 158
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=97.92 E-value=2.9e-06 Score=71.33 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=41.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN 206 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~ 206 (277)
.+|+||||||||++.|.|+.+ .+.+.+..+........+.+++|+||++..+..
T Consensus 12 l~Gp~GsGKSTl~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (205)
T 3tr0_A 12 ISAPSGAGKTSLVRALVKALA----EIKISISHTTRPKRPGDQEGVDYFFIDETRFQA 65 (205)
T ss_dssp EECCTTSCHHHHHHHHHHHSS----SEEECCCEECSCCCTTCCBTTTBEECCHHHHHH
T ss_pred EECcCCCCHHHHHHHHHhhCC----CeEEeceeccCCCchhHhcCceEEeccHHHHHH
Confidence 479999999999999999964 577888776654433446789999999765543
No 159
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=97.91 E-value=1.5e-06 Score=75.26 Aligned_cols=54 Identities=20% Similarity=0.375 Sum_probs=42.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH-HHHhcceEEEcCCchhhHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ-ASLRQAIGVVPQDTVLFNN 206 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~vpqd~~~~n~ 206 (277)
.+|+||||||||+++|.|+. | |.|.+ |.++....+ ...+.+++|+||++..|..
T Consensus 28 lvGpsGsGKSTLl~~L~g~~-p--G~i~~-g~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 82 (218)
T 1z6g_A 28 ICGPSGVGKGTLIKKLLNEF-P--NYFYF-SVSCTTRKKREKEKEGVDYYFIDKTIFED 82 (218)
T ss_dssp EECSTTSSHHHHHHHHHHHS-T--TTEEE-CCCEECSCCCSSCCBTTTBEECCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhC-C--CcEEE-eecccCCCCCcccccCCeEEECCHHHHHH
Confidence 37999999999999999998 4 99999 776654322 2245689999999866644
No 160
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=97.91 E-value=2.3e-06 Score=73.08 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=36.5
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n 205 (277)
.+|+||||||||+++|.|+.+ .+.+++...........+++++|+||++..|.
T Consensus 25 l~GpnGsGKSTLl~~l~gl~~----~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 77 (207)
T 1znw_A 25 LSGPSAVGKSTVVRCLRERIP----NLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQ 77 (207)
T ss_dssp EECSTTSSHHHHHHHHHHHST----TCEECCCEESSCCCTTCCBTTTBEECCHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhCC----ceEEcccccccCCcccccCCCeeEecCHHHHH
Confidence 479999999999999999986 24444432221121223578999999975543
No 161
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=97.89 E-value=3.1e-06 Score=77.49 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=42.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH----HH--HhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ----AS--LRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~----~~--~~~~i~~vpqd~~ 202 (277)
.+|+|||||||+++.|+|+.++++|+|.+.|.++..... .. .+.+|+|++|++.
T Consensus 105 lvG~nGsGKTTll~~Lag~l~~~~g~V~l~g~d~~r~~a~~ql~~~~~~~~i~~v~q~~~ 164 (302)
T 3b9q_A 105 IVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGD 164 (302)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCC--
T ss_pred EEcCCCCCHHHHHHHHHHHHHHcCCeEEEEeecccchhHHHHHHHHHHhcCceEEEecCC
Confidence 489999999999999999999999999999988754321 11 2457999999864
No 162
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=97.89 E-value=1.4e-06 Score=76.94 Aligned_cols=53 Identities=19% Similarity=0.180 Sum_probs=35.5
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH--------HHHhcceEEEcCC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ--------ASLRQAIGVVPQD 200 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~--------~~~~~~i~~vpqd 200 (277)
..+|+||||||||+++|+|+..|++|.|.++|.++...++ ...+.+++|++|+
T Consensus 31 ~i~GpnGsGKSTll~~i~g~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 91 (227)
T 1qhl_A 31 TLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLD 91 (227)
T ss_dssp HHHSCCSHHHHHHHHHHHHHHSCCTTTC------------------CGGGBCSSEEEEEEE
T ss_pred EEECCCCCCHHHHHHHHhcccccCCCeEEECCEEcccCCccccccchhhHhhcCcEEEEEe
Confidence 4579999999999999999999999999999988743221 1235689999985
No 163
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=97.81 E-value=7.6e-06 Score=75.01 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=43.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH----HH--HhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ----AS--LRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~----~~--~~~~i~~vpqd~ 201 (277)
.+|+|||||||+++.|+|++++++|+|.+.|.++..... .. .+.+++|++|++
T Consensus 107 lvG~nGsGKTTll~~Lagll~~~~g~V~l~g~D~~r~~a~~ql~~~~~~~~i~~v~q~~ 165 (304)
T 1rj9_A 107 VVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPE 165 (304)
T ss_dssp EECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTTTHHHHHHHHHHTCCEECCCT
T ss_pred EECCCCCcHHHHHHHHHHHHHhcCCEEEEEeecCCChhHHHHHHHHHHhcCceEEEeCC
Confidence 479999999999999999999999999999998764321 11 245799999985
No 164
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=97.79 E-value=9.2e-06 Score=78.11 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=48.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCE---eccCC-----cHHHHhcceEEEcCC--chhhHHhHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQ---NIKTV-----SQASLRQAIGVVPQD--TVLFNNSIK 209 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~---~~~~~-----~~~~~~~~i~~vpqd--~~~~n~~~~ 209 (277)
.+|+||+|||||+++|+|+.+++.|.|.++|+ ++... ....+++.|+|++|+ +...+.++.
T Consensus 162 IvG~sGsGKSTLl~~Iag~~~~~~G~i~~~G~r~~ev~~~~~~~~~~~~l~r~i~~v~q~~~~~~~~~~v~ 232 (438)
T 2dpy_A 162 LFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGA 232 (438)
T ss_dssp EEECTTSSHHHHHHHHHHHSCCSEEEEEEESCCHHHHHHHHHTTTHHHHHHTEEEEEECTTSCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHhcccCCCeEEEEEeceecHHHHHHHHhhccccccCceEEEEECCCCCHHHHHHHH
Confidence 47999999999999999999999999999998 45421 134567789999994 455555554
No 165
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=97.76 E-value=3.5e-06 Score=81.58 Aligned_cols=44 Identities=27% Similarity=0.334 Sum_probs=39.1
Q ss_pred hcCCCCCchhHHHHHHhccccCcee-E-EEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG-D-IFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G-~-i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
.+|+||||||||+++|+|+.++++| + |+++|. .+++++|+||+.
T Consensus 143 IvGpnGsGKSTLlr~L~Gl~~p~~G~~pI~vdg~---------~~~~i~~vpq~~ 188 (460)
T 2npi_A 143 IVGGSQTGKTSLSRTLCSYALKFNAYQPLYINLD---------PQQPIFTVPGCI 188 (460)
T ss_dssp EEESTTSSHHHHHHHHHHTTHHHHCCCCEEEECC---------TTSCSSSCSSCC
T ss_pred EECCCCCCHHHHHHHHhCcccccCCceeEEEcCC---------ccCCeeeeccch
Confidence 4799999999999999999999999 8 999982 256799999985
No 166
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=97.75 E-value=1.1e-05 Score=75.41 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=40.0
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEc-CCchh---hHHhHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVP-QDTVL---FNNSIK 209 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vp-qd~~~---~n~~~~ 209 (277)
+|++|||||||+++|.|++++..|.|.++|.. .......++.++|++ |++.. +..++.
T Consensus 181 vG~sGsGKSTll~~l~~~~~~~~g~I~ie~~~--e~~~~~~~~~v~~v~~q~~~~~~~~~~t~~ 242 (361)
T 2gza_A 181 AGETGSGKTTLMKALMQEIPFDQRLITIEDVP--ELFLPDHPNHVHLFYPSEAKEEENAPVTAA 242 (361)
T ss_dssp EESSSSCHHHHHHHHHTTSCTTSCEEEEESSS--CCCCTTCSSEEEEECC----------CCHH
T ss_pred ECCCCCCHHHHHHHHHhcCCCCceEEEECCcc--ccCccccCCEEEEeecCccccccccccCHH
Confidence 59999999999999999999999999999842 122222456799999 77543 455554
No 167
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=97.74 E-value=7.8e-06 Score=76.77 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=43.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH----HH--HhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ----AS--LRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~----~~--~~~~i~~vpqd~~ 202 (277)
.+|+|||||||+++.|+|+.++++|+|.+.|.++..... .. .+.+|+|++|++.
T Consensus 162 lvG~nGsGKTTll~~Lag~l~~~~G~V~l~g~D~~r~~a~eql~~~~~r~~i~~v~q~~~ 221 (359)
T 2og2_A 162 IVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGD 221 (359)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCSSS
T ss_pred EEcCCCChHHHHHHHHHhhccccCCEEEEecccccccchhHHHHHHHHhcCeEEEEeccc
Confidence 489999999999999999999999999999988754321 11 2457999999754
No 168
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=97.70 E-value=3.1e-06 Score=84.49 Aligned_cols=53 Identities=17% Similarity=0.148 Sum_probs=35.8
Q ss_pred hcCCCCCchhHHHHHHhccccC-ceeEEEECCEeccCC--c-HHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV-ESGDIFIDNQNIKTV--S-QASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~-~~G~i~~~g~~~~~~--~-~~~~~~~i~~vpqd~ 201 (277)
.+|++|||||||+++|.|+..| ++|.|.++|.++... + ....++.|+|+||++
T Consensus 50 IvG~nGsGKSTLL~~I~Gl~~P~~sG~vt~~g~~i~~~~~~~~~~~~~~i~~v~Q~~ 106 (608)
T 3szr_A 50 VIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEI 106 (608)
T ss_dssp CCCCTTSCHHHHHHHHHSCC-------CCCSCEEEEEEECSSSSCCEEEESCC---C
T ss_pred EECCCCChHHHHHHHHhCCCCCCCCCeEEEcCEEEEEecCCccccceeEEeeecccc
Confidence 4899999999999999999877 799999999986421 1 234567799999985
No 169
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=97.69 E-value=7.6e-06 Score=74.61 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=36.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEE---CCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFI---DNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~---~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
.+|+||+|||||+++|. +.++..|+|.+ +|+.++.........+++||+|+|
T Consensus 170 l~G~sG~GKSTLln~l~-~~~~~~G~i~~~~~~G~~~t~~~~~~~~~~~g~v~d~p 224 (302)
T 2yv5_A 170 LAGPSGVGKSSILSRLT-GEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTP 224 (302)
T ss_dssp EECSTTSSHHHHHHHHH-SCCCCCSCC---------CCCCEEEEEETTTEEEESSC
T ss_pred EECCCCCCHHHHHHHHH-HhhCcccccccccCCCCCceeeEEEEEcCCCcEEEECc
Confidence 36999999999999999 99999999999 898776543211123699999997
No 170
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=97.68 E-value=3e-06 Score=71.41 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=38.1
Q ss_pred hcCCCCCchhHHHHHHhccccCc---eeEEEECCEeccCCc---HHHHh-cceE----EEcCCchhh
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE---SGDIFIDNQNIKTVS---QASLR-QAIG----VVPQDTVLF 204 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~---~G~i~~~g~~~~~~~---~~~~~-~~i~----~vpqd~~~~ 204 (277)
.+|.+|||||||++.|.|++++. .|.|.++|.++...+ .+..+ +.++ +++|++.+|
T Consensus 7 IvG~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~~i~~~~~~~~d~~r~~~ig~~~~~~~~~~~~~ 73 (171)
T 2f1r_A 7 IVGTSDSGKTTLITRMMPILRERGLRVAVVKRHAHGDFEIDKEGKDSWKIYNSGADVVIASPVKLAF 73 (171)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHTTCCEEEEEC------------CHHHHHHHHTCEEEEECSSEEEE
T ss_pred EECCCCCCHHHHHHHHHHHhhhcCCceEEEEEcCcccccCCccchhHHHHHhcCCceEEECCCcEEE
Confidence 47899999999999999999987 899999998865432 23333 3455 899998765
No 171
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=97.63 E-value=1.2e-05 Score=66.82 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=41.0
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~ 208 (277)
..|+||||||||+++|+|+. +.+|+|.++|.++.... ..+ + |+||++.+++.++
T Consensus 38 L~G~nGaGKTTLlr~l~g~l-~~~G~V~~~g~~i~~~~--~~~-~--~~~q~~~l~~ltv 91 (158)
T 1htw_A 38 LNGDLGAGKTTLTRGMLQGI-GHQGNVKSPTYTLVEEY--NIA-G--KMIYHFDLYRLAD 91 (158)
T ss_dssp EECSTTSSHHHHHHHHHHHT-TCCSCCCCCTTTCEEEE--EET-T--EEEEEEECTTCSC
T ss_pred EECCCCCCHHHHHHHHHHhC-CCCCeEEECCEeeeeec--cCC-C--cceeccccccCCc
Confidence 47999999999999999999 88999999997764211 111 2 7899865555554
No 172
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=97.58 E-value=1.8e-05 Score=77.45 Aligned_cols=53 Identities=26% Similarity=0.376 Sum_probs=42.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCc------HHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS------QASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~------~~~~~~~i~~vpqd~ 201 (277)
.+|.||||||||++.|+|++++.+|+|.+.|.+..... ....+++|+|++|++
T Consensus 298 LVGpNGSGKTTLl~~LAgll~~~~G~V~l~g~D~~r~aa~eQL~~~~~r~~I~vV~Q~~ 356 (503)
T 2yhs_A 298 MVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHT 356 (503)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHHHHHHTCCEECCST
T ss_pred EECCCcccHHHHHHHHHHHhhhcCCeEEEecCcccchhhHHHHHHHHHhcCceEEeccc
Confidence 47999999999999999999999999999877654321 112366899999985
No 173
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=97.58 E-value=7.1e-06 Score=70.08 Aligned_cols=48 Identities=25% Similarity=0.310 Sum_probs=39.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
.+|+||||||||++.|+|+.+ ++| |.++|..+.... ..++.++|++|+
T Consensus 6 i~G~nG~GKTTll~~l~g~~~-~~G-i~~~g~~~~~~~--~~~~~ig~~~~~ 53 (189)
T 2i3b_A 6 LTGPPGVGKTTLIHKASEVLK-SSG-VPVDGFYTEEVR--QGGRRIGFDVVT 53 (189)
T ss_dssp EESCCSSCHHHHHHHHHHHHH-HTT-CCCEEEECCEEE--TTSSEEEEEEEE
T ss_pred EECCCCChHHHHHHHHHhhcc-cCC-EEEcCEecchhH--hhhceEEEEEEe
Confidence 479999999999999999999 889 999987764222 346679999997
No 174
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=97.51 E-value=3.9e-05 Score=71.03 Aligned_cols=53 Identities=21% Similarity=0.268 Sum_probs=43.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHH------HHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQA------SLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~------~~~~~i~~vpqd~ 201 (277)
.+|+|||||||+++.|+|++++.+|+|.+.|.++....+. ..+.++.|++|+.
T Consensus 134 lvG~nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~r~~a~eql~~~~~~~gv~~v~q~~ 192 (328)
T 3e70_C 134 FVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSY 192 (328)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSSTTHHHHHHHHHHHTTCEEECCCT
T ss_pred EECCCCCCHHHHHHHHHHHHHhcCCEEEEEeecccccchHHHHHHHHHHcCceEEeccc
Confidence 4899999999999999999999999999999998765432 2345688999974
No 175
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=97.48 E-value=9.8e-08 Score=81.26 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=60.0
Q ss_pred HhhcccCcccccCCeeeccCHHH----HHHHHHHHHhccCCCEEEEecCCCC-------CCHHHHHHHHHHHHHH-hc-C
Q psy18009 44 AILKNISFTVPAGKTLALLSGGE----KQRVAIARTLLKAPQIVLLDEATSA-------LDTKTERNIQSALNRV-CA-S 110 (277)
Q Consensus 44 ~vL~~l~l~i~~~~~v~~LSgGq----rQrv~IAral~~~p~ilILDEPTa~-------LD~~~~~~l~~~l~~l-~~-~ 110 (277)
++++.+++.-....++..+|+|+ +|+++++++++.+|.++++||||++ ||+.....+.+.+++. .+ +
T Consensus 72 ~~l~~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~li~~~~ll~~de~~~~~~d~~i~ld~~~~~~~~r~l~r~~~~~g 151 (211)
T 3asz_A 72 EHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERG 151 (211)
T ss_dssp HHHHHHHTTCCEEECCEETTTTEECSSCEEECCCSEEEEESTTTTSSHHHHTTCSEEEEEECCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHcCCCcCCCcccCcccCCCCCeEEeCCCcEEEEeehhhccCHHHHHhcCEEEEEeCCHHHHHHHHHHHHHHHhC
Confidence 34555555433444677899996 4788999999999999999999999 9999999999998875 33 4
Q ss_pred ceEEEEecCc
Q psy18009 111 RTTIIVAHRL 120 (277)
Q Consensus 111 ~tiIiIsH~l 120 (277)
.+++.++|++
T Consensus 152 ~t~~~~~~~~ 161 (211)
T 3asz_A 152 RSLEGVVAQY 161 (211)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 5666688874
No 176
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=97.45 E-value=1.1e-05 Score=73.56 Aligned_cols=57 Identities=11% Similarity=0.053 Sum_probs=44.7
Q ss_pred CeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCC-CCHHHHHHHHHHHHHHhcC-c-eEEEEecCcc
Q psy18009 57 KTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSA-LDTKTERNIQSALNRVCAS-R-TTIIVAHRLS 121 (277)
Q Consensus 57 ~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~-LD~~~~~~l~~~l~~l~~~-~-tiIiIsH~l~ 121 (277)
.++..+|+|+|||+.+|||++ ++++||||++ ||+... ++++++... + ++|+..|++.
T Consensus 109 ~~~~~~sgg~rqrv~~ara~~----ll~ldePt~~~Ld~~~~----~~l~~l~~~~~iilV~~K~Dl~ 168 (301)
T 2qnr_A 109 RYLHDESGLNRRHIIDNRVHC----CFYFISPFGHGLKPLDV----AFMKAIHNKVNIVPVIAKADTL 168 (301)
T ss_dssp HHHHHHTSSCCTTCCCCCCCE----EEEEECSSSSSCCHHHH----HHHHHHTTTSCEEEEECCGGGS
T ss_pred HHHHHhCHHhhhhhhhhhhhh----eeeeecCcccCCCHHHH----HHHHHHHhcCCEEEEEEeCCCC
Confidence 456779999999999999886 9999999985 999873 566666554 3 4455789974
No 177
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.45 E-value=0.00011 Score=66.74 Aligned_cols=48 Identities=23% Similarity=0.393 Sum_probs=40.2
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhc
Q psy18009 76 LLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTII 124 (277)
Q Consensus 76 l~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~ 124 (277)
+..+|+++|+|||++ ||+...+.+++.+.+...+.++|++||+.+.+.
T Consensus 131 l~~~~~vlilDE~~~-L~~~~~~~L~~~le~~~~~~~~Il~t~~~~~l~ 178 (354)
T 1sxj_E 131 LAHRYKCVIINEANS-LTKDAQAALRRTMEKYSKNIRLIMVCDSMSPII 178 (354)
T ss_dssp ---CCEEEEEECTTS-SCHHHHHHHHHHHHHSTTTEEEEEEESCSCSSC
T ss_pred cCCCCeEEEEeCccc-cCHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHH
Confidence 456899999999999 999999999999998766667888999987764
No 178
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=97.43 E-value=4.5e-05 Score=71.62 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=49.1
Q ss_pred hcCCCCCchhHHHHHHhcccc-CceeEEEEC-CEeccCCcHHHHhcceEEEcCCc-hhhHHhHHHHhhcccChHHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD-VESGDIFID-NQNIKTVSQASLRQAIGVVPQDT-VLFNNSIKAIQKNFVDMENMFDLL 225 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~-~~~G~i~~~-g~~~~~~~~~~~~~~i~~vpqd~-~~~n~~~~~~~~~~~~~~~~~~~~ 225 (277)
.+|+||+|||||+++|.|..+ +..|.|.++ |+.... .....++++||+. .+...++..+...-++.....+.+
T Consensus 220 lvG~sG~GKSTLln~L~g~~~~~~~G~I~~~~G~g~~t----t~~~~i~~v~q~~~l~dtpgv~e~~l~~l~~~e~~~~~ 295 (358)
T 2rcn_A 220 FAGQSGVGKSSLLNALLGLQNEILTNDVSNVSGLGQHT----TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGF 295 (358)
T ss_dssp EECCTTSSHHHHHHHHHCCSSCCCCC-----------------CCCEEEECTTSCEEEECHHHHTCCCCCCCHHHHHHTS
T ss_pred EECCCCccHHHHHHHHhccccccccCCccccCCCCccc----eEEEEEEEECCCCEecCcccHHHhhhcCCCHHHHHHHH
Confidence 479999999999999999999 999999887 654421 2345699999985 344445443211113444445566
Q ss_pred HHHHHhcCCC
Q psy18009 226 QETCDVIDIP 235 (277)
Q Consensus 226 ~~~~~~l~I~ 235 (277)
.++.+.++..
T Consensus 296 ~e~l~~~gl~ 305 (358)
T 2rcn_A 296 VEFHDYLGHC 305 (358)
T ss_dssp GGGGGGTTCS
T ss_pred HHHHHHcCCc
Confidence 6777776653
No 179
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=97.43 E-value=0.00028 Score=60.33 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=43.9
Q ss_pred ccCHHHHH-HHHHHHHhc--cCCCEEEEecCCCCCCHH-------H-----HHHHHHHHHHHhc--CceEEEEecCcch-
Q psy18009 61 LLSGGEKQ-RVAIARTLL--KAPQIVLLDEATSALDTK-------T-----ERNIQSALNRVCA--SRTTIIVAHRLST- 122 (277)
Q Consensus 61 ~LSgGqrQ-rv~IAral~--~~p~ilILDEPTa~LD~~-------~-----~~~l~~~l~~l~~--~~tiIiIsH~l~e- 122 (277)
.++..+.. .+.-+..++ .+|+++++|||++.+|+. . ...++..+.++.+ +.++|+++|...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~lliiD~~~~~~~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~~~h~~~~~ 177 (243)
T 1n0w_A 98 AFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 177 (243)
T ss_dssp CCSHHHHHHHHHHHHHHHHHSCEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred cCCHHHHHHHHHHHHHHHhcCCceEEEEeCchHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeeeeecC
Confidence 35555533 233333333 589999999999999975 2 2344555555543 5688889996543
Q ss_pred ------------------hcc-CceEEEeeCc
Q psy18009 123 ------------------IIH-ADEILVMHAG 135 (277)
Q Consensus 123 ------------------v~~-~Drv~vL~dG 135 (277)
+.. ||++++|+.|
T Consensus 178 ~~~~~~~~~~~~~~g~~~~~~~~d~vi~l~~~ 209 (243)
T 1n0w_A 178 DGAAMFAADPKKPIGGNIIAHASTTRLYLRKG 209 (243)
T ss_dssp -------------------CCTTCEEEEEEEC
T ss_pred CCccccCCCcccCCccChhhhcCcEEEEEEEc
Confidence 333 8999999865
No 180
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=97.42 E-value=4.6e-05 Score=70.42 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=38.3
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcC
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQ 199 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpq 199 (277)
+|+||||||||+++|.|++++++|.|.++|.+.... ...++.++|+++
T Consensus 177 ~G~~GsGKTTll~~l~g~~~~~~g~i~i~~~~e~~~--~~~~~~i~~~~g 224 (330)
T 2pt7_A 177 CGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVF--KHHKNYTQLFFG 224 (330)
T ss_dssp EESTTSCHHHHHHHGGGGSCTTSCEEEEESSCCCCC--SSCSSEEEEECB
T ss_pred ECCCCCCHHHHHHHHhCCCcCCCcEEEECCeecccc--ccchhEEEEEeC
Confidence 599999999999999999999999999999642211 123456889965
No 181
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=97.42 E-value=1.9e-05 Score=75.49 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=48.6
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHHhhcccChHHHHHHHHHHH
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQETC 229 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 229 (277)
+|+||||||||+++|.|+.++++|+|.++|.+++ + .+|++|++...+.++.... ++ ...+..+++++
T Consensus 75 vG~nGaGKSTLln~L~Gl~~p~~GsI~~~g~~~t-------~--~~~v~q~~~~~~ltv~D~~-g~---~~~~~~~~~~L 141 (413)
T 1tq4_A 75 TGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVT-------M--ERHPYKHPNIPNVVFWDLP-GI---GSTNFPPDTYL 141 (413)
T ss_dssp EECTTSSHHHHHHHHHTCCTTSTTSCCCCC-----------C--CCEEEECSSCTTEEEEECC-CG---GGSSCCHHHHH
T ss_pred ECCCCCcHHHHHHHHhCCCCccCceEEECCeecc-------e--eEEeccccccCCeeehHhh-cc---cchHHHHHHHH
Confidence 7999999999999999999999999999987653 1 2678887644444443211 11 01123467777
Q ss_pred HhcCCC
Q psy18009 230 DVIDIP 235 (277)
Q Consensus 230 ~~l~I~ 235 (277)
+++++.
T Consensus 142 ~~~~L~ 147 (413)
T 1tq4_A 142 EKMKFY 147 (413)
T ss_dssp HHTTGG
T ss_pred HHcCCC
Confidence 777753
No 182
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=97.41 E-value=2e-05 Score=66.38 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=30.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
.+|+||||||||++.|+|+.+ +.++|...........++.++|++|+
T Consensus 5 l~G~nGsGKTTLl~~l~g~l~-----i~~~g~~~~~~~~~~~~~~ig~~~~~ 51 (178)
T 1ye8_A 5 ITGEPGVGKTTLVKKIVERLG-----KRAIGFWTEEVRDPETKKRTGFRIIT 51 (178)
T ss_dssp EECCTTSSHHHHHHHHHHHHG-----GGEEEEEEEEEC------CCEEEEEE
T ss_pred EECCCCCCHHHHHHHHHHHhC-----CcCCCEEhhhhccccccceeEEEeec
Confidence 479999999999999999985 34455433211111235678999886
No 183
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=97.40 E-value=1.1e-05 Score=74.76 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=44.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH----HHHhcceEEEcCCchhh
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ----ASLRQAIGVVPQDTVLF 204 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~----~~~~~~i~~vpqd~~~~ 204 (277)
.+|++|||||||+++|.|+.++.+|+|.+.|.+...... ...+..++|++|++..+
T Consensus 60 i~G~~GaGKSTLl~~l~g~~~~~~g~v~i~~~d~~~~~~~~~~~~~~~~i~~v~q~~~~~ 119 (337)
T 2qm8_A 60 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAF 119 (337)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGGGSTTGGGCTTEE
T ss_pred EECCCCCCHHHHHHHHHHhhhhCCCEEEEEEEcCcccccccchHHHhhhheeeccCcccc
Confidence 489999999999999999999999999999987753221 12356799999986544
No 184
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=97.40 E-value=0.00032 Score=57.91 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=39.3
Q ss_pred ccCCCEEEEecCCC-CCCHHHHHHHHHHHHHHh-cCceEEEEecCcch
Q psy18009 77 LKAPQIVLLDEATS-ALDTKTERNIQSALNRVC-ASRTTIIVAHRLST 122 (277)
Q Consensus 77 ~~~p~ilILDEPTa-~LD~~~~~~l~~~l~~l~-~~~tiIiIsH~l~e 122 (277)
+.+|++||||||++ ++|+...+.+++++.... .+.++|++||...+
T Consensus 98 ~~~~~llilDE~~~~~~~~~~~~~l~~ll~~~~~~~~~ii~tsn~~~~ 145 (180)
T 3ec2_A 98 VLNSPVLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIITTNYSLQ 145 (180)
T ss_dssp HHTCSEEEEETCSSSCCCHHHHHHHHHHHHHHHHTTCEEEEECCCCSC
T ss_pred hcCCCEEEEeCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEcCCChh
Confidence 45899999999996 899999999999998886 45688889987654
No 185
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=97.36 E-value=5.1e-05 Score=69.66 Aligned_cols=68 Identities=18% Similarity=0.156 Sum_probs=45.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHHHHhhcc----cChHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNF----VDMENMFDL 224 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~~~~~~~----~~~~~~~~~ 224 (277)
..|+||||||||++.|.|+.++..|. ..++|||||+.++..++......+ .......+.
T Consensus 95 I~G~sGsGKSTL~~~L~gll~~~~G~-----------------~~v~~v~qd~~~~~~t~~e~~~~~~~~g~~~~~d~~~ 157 (312)
T 3aez_A 95 VAGSVAVGKSTTARVLQALLARWDHH-----------------PRVDLVTTDGFLYPNAELQRRNLMHRKGFPESYNRRA 157 (312)
T ss_dssp EECCTTSCHHHHHHHHHHHHHTSTTC-----------------CCEEEEEGGGGBCCHHHHHHTTCTTCTTSGGGBCHHH
T ss_pred EECCCCchHHHHHHHHHhhccccCCC-----------------CeEEEEecCccCCcccHHHHHHHHHhcCCChHHHHHH
Confidence 37999999999999999999886442 459999999765554554321111 111222355
Q ss_pred HHHHHHhcC
Q psy18009 225 LQETCDVID 233 (277)
Q Consensus 225 ~~~~~~~l~ 233 (277)
+.+.++.++
T Consensus 158 ~~~~L~~l~ 166 (312)
T 3aez_A 158 LMRFVTSVK 166 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 677787776
No 186
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=97.36 E-value=3.8e-05 Score=72.08 Aligned_cols=58 Identities=28% Similarity=0.424 Sum_probs=45.3
Q ss_pred hcCCCCCchhHHHHHHhccccCc-eeEEEECCEeccCCcHHHHhcceEEEcC-----CchhhHHhHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE-SGDIFIDNQNIKTVSQASLRQAIGVVPQ-----DTVLFNNSIKA 210 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~-~G~i~~~g~~~~~~~~~~~~~~i~~vpq-----d~~~~n~~~~~ 210 (277)
.+|++||||||++++|.|++++. +|.|.+.|.++.. ..+..++||+| ++..|..++..
T Consensus 141 ivG~~GsGKTTll~~l~~~~~~~~~g~I~~~e~~~e~----~~~~~~~~v~Q~~~g~~~~~~~~~l~~ 204 (372)
T 2ewv_A 141 VTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEY----VFKHKKSIVNQREVGEDTKSFADALRA 204 (372)
T ss_dssp EECSSSSSHHHHHHHHHHHHHHHSCCEEEEEESSCCS----CCCCSSSEEEEEEBTTTBSCSHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhcCcCCCcEEEEecccHhh----hhccCceEEEeeecCCCHHHHHHHHHH
Confidence 47999999999999999999987 8999777765532 23456999999 66666666654
No 187
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=97.34 E-value=4.6e-05 Score=71.35 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=41.6
Q ss_pred hcCCCCCchhHHHHHHhcccc--------------------------------------CceeEEEECCEeccCCcHHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD--------------------------------------VESGDIFIDNQNIKTVSQASL 190 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~--------------------------------------~~~G~i~~~g~~~~~~~~~~~ 190 (277)
.+|.||||||||+++|+++.. +..|+++++|++++......+
T Consensus 65 lvG~NGaGKStLl~aI~~l~~~~~~~~~i~~g~~~~~v~~~~~~~~~~~~~~l~r~~~~~~~~~i~ing~~~~~~~~~~~ 144 (415)
T 4aby_A 65 FTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWGDGDESEADSASRRLSSAGRGAARLSGEVVSVRELQEW 144 (415)
T ss_dssp EEESHHHHHHHHTHHHHHHTTCCCCGGGBCTTCSEEEEEEEC--------CEEEEEEETTSCEEEEETTEEECHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhCCCccHHHhcCCCCeEEEEEEEEecCCCceEEEEEEEecCCceEEEECCEECCHHHHHHH
Confidence 489999999999999976653 347889999999875444444
Q ss_pred -hcceEEEcCCc
Q psy18009 191 -RQAIGVVPQDT 201 (277)
Q Consensus 191 -~~~i~~vpqd~ 201 (277)
...++++||+.
T Consensus 145 ~~~~i~~~~q~~ 156 (415)
T 4aby_A 145 AQGRLTIHWQHS 156 (415)
T ss_dssp HTTTEEEETTTC
T ss_pred HhhceEEecCcc
Confidence 44599999985
No 188
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=97.33 E-value=1.8e-05 Score=77.05 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=42.1
Q ss_pred ehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH--------HHHhcceEEEcCCc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ--------ASLRQAIGVVPQDT 201 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~--------~~~~~~i~~vpqd~ 201 (277)
...+|+||||||||+++|+|+.+|++|+|.++|+++...+. ..+..+++|+.++.
T Consensus 32 ~~liG~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 94 (483)
T 3euj_A 32 TTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLET 94 (483)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCCTTTCCCCCTTSCSCCCCSSCCSCGGGSCSSEEEEEEEE
T ss_pred EEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEEcccCchhHHhHHHHHhcCCCceEEEEeh
Confidence 34579999999999999999999999999999988764332 12234566776653
No 189
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=97.33 E-value=6.6e-06 Score=76.55 Aligned_cols=58 Identities=16% Similarity=0.263 Sum_probs=42.6
Q ss_pred hcCCCCCchhHHHHHHhccccCce----eEEEEC----CEeccCCcHHHHhcceEEEcCCchhhHHhH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVES----GDIFID----NQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~----G~i~~~----g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~ 208 (277)
.+|+||||||||+++|.|++++.. |+++++ |.++ ......+ ..|+|++|++..+..++
T Consensus 175 IvG~nGsGKSTLlk~L~gl~~~~~~~e~G~i~i~~~~~~~~~-~~~~~~~-~~I~~~~q~~~~~~~t~ 240 (365)
T 1lw7_A 175 ILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQ-AMQYSDY-PQMALGHQRYIDYAVRH 240 (365)
T ss_dssp EECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHHSSSSCTT-SSCTTTH-HHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhCCCcchhhHHHHHHhhcCCCcc-cCChhHH-HHHHHHHHHHHHHHHhc
Confidence 469999999999999999999998 888763 4444 2222233 34888888876665554
No 190
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=97.29 E-value=4.3e-05 Score=73.09 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=44.2
Q ss_pred cCHHHHHHHHHHHHhccCCC---EEEEecCC-CCCCHHHHHHHHHHHHHHhcCceEEEEecCcchh
Q psy18009 62 LSGGEKQRVAIARTLLKAPQ---IVLLDEAT-SALDTKTERNIQSALNRVCASRTTIIVAHRLSTI 123 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~---ilILDEPT-a~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev 123 (277)
++.+++|+++|||+++.+|+ +|+||||| ++||+... ++++.+..+..+|+|.|+.+.+
T Consensus 119 ~~~~l~qr~~IaRal~~d~~~~vlL~ldePt~~~L~~~d~----~~lk~L~~~v~iIlVinK~Dll 180 (418)
T 2qag_C 119 FEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDI----EFMKRLHEKVNIIPLIAKADTL 180 (418)
T ss_dssp HHHHTTTSCC-CCCCCCCC-CCEEEEECCC-CCSCCHHHH----HHHHHHTTTSEEEEEEESTTSS
T ss_pred HHHHHHHHHHHHHHhccCCCeeEEEEEecCcccCCCHHHH----HHHHHHhccCcEEEEEEcccCc
Confidence 56777889999999999999 99999999 69999874 4555666666778888887754
No 191
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=97.23 E-value=3.6e-05 Score=70.73 Aligned_cols=52 Identities=19% Similarity=0.288 Sum_probs=27.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEE---CCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFI---DNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~---~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
.+|+||+|||||+++|.|+.++..|+|.+ +|+.++... ..++..++|++|+|
T Consensus 178 lvG~sG~GKSTLln~L~g~~~~~~G~I~~~~~~G~~tt~~~-~~~~~~~g~v~dtp 232 (307)
T 1t9h_A 178 FAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHV-ELIHTSGGLVADTP 232 (307)
T ss_dssp EEESHHHHHHHHHHHHCC-------------------CCCC-CEEEETTEEEESSC
T ss_pred EECCCCCCHHHHHHHhcccccccccceeeecCCCcccccHH-HHhhcCCEEEecCC
Confidence 37999999999999999999999999998 887765432 12222379999997
No 192
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=97.17 E-value=7.3e-05 Score=66.81 Aligned_cols=47 Identities=28% Similarity=0.369 Sum_probs=38.1
Q ss_pred hcCCCCCchhHHHHHHhccccCc-eeEEEECCEeccCCcHHHHhcceEEEcC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE-SGDIFIDNQNIKTVSQASLRQAIGVVPQ 199 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~-~G~i~~~g~~~~~~~~~~~~~~i~~vpq 199 (277)
.+|+||||||||+++|.|++++. +|+|.++|.++.... ...+++++|
T Consensus 30 i~Gp~GsGKSTll~~l~g~~~~~~~G~I~~~g~~i~~~~----~~~~~~v~q 77 (261)
T 2eyu_A 30 VTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVF----KHKKSIVNQ 77 (261)
T ss_dssp EECSTTCSHHHHHHHHHHHHHHHCCCEEEEEESSCCSCC----CCSSSEEEE
T ss_pred EECCCCccHHHHHHHHHHhCCCCCCCEEEEcCCcceeec----CCcceeeeH
Confidence 38999999999999999999987 899999998765432 223567777
No 193
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=97.14 E-value=0.00034 Score=57.89 Aligned_cols=50 Identities=20% Similarity=0.228 Sum_probs=36.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~ 202 (277)
..|+||||||||++.|+|. +..|.|+++|.++.... .....++|++|+..
T Consensus 14 l~G~~GsGKSTl~~~La~~--~~~g~i~i~~d~~~~~~--~~~~~~~~~~~~~~ 63 (191)
T 1zp6_A 14 LSGHPGSGKSTIAEALANL--PGVPKVHFHSDDLWGYI--KHGRIDPWLPQSHQ 63 (191)
T ss_dssp EEECTTSCHHHHHHHHHTC--SSSCEEEECTTHHHHTC--CSSCCCTTSSSHHH
T ss_pred EECCCCCCHHHHHHHHHhc--cCCCeEEEcccchhhhh--hcccccCCccchhh
Confidence 4799999999999999997 56799999987653211 01233678888643
No 194
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=97.11 E-value=6e-05 Score=66.55 Aligned_cols=52 Identities=29% Similarity=0.368 Sum_probs=44.1
Q ss_pred hcCCCCCchhHHHHHHh---ccccCceeEEE--------ECCEeccC-CcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLF---RFYDVESGDIF--------IDNQNIKT-VSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~---Gl~~~~~G~i~--------~~g~~~~~-~~~~~~~~~i~~vpqd 200 (277)
..|++||||||+++.|. |+..+++|.++ .+|.++.. .....+++.+++++|+
T Consensus 32 I~G~~GsGKSTl~k~La~~Lg~~~~d~g~i~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 95 (252)
T 4e22_A 32 VDGPSGAGKGTLCKALAESLNWRLLDSGAIYRVLALAALHHQVDISTEEALVPLAAHLDVRFVS 95 (252)
T ss_dssp EECCTTSSHHHHHHHHHHHTTCEEEEHHHHHHHHHHHHHHTTCCSSSSTTHHHHHHTCCEEEEE
T ss_pred EECCCCCCHHHHHHHHHHhcCCCcCCCCceehHhHHHHHHcCCCcccHHHHHHHHHcCCEEEec
Confidence 47999999999999999 99999999998 88988753 3456677889999864
No 195
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=97.04 E-value=3.9e-05 Score=65.27 Aligned_cols=21 Identities=48% Similarity=0.676 Sum_probs=19.2
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
.+|+||||||||++.|.|+++
T Consensus 9 lvGpsGaGKSTLl~~L~~~~~ 29 (198)
T 1lvg_A 9 LSGPSGAGKSTLLKKLFQEHS 29 (198)
T ss_dssp EECCTTSSHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHhhCc
Confidence 479999999999999999875
No 196
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=97.04 E-value=0.00014 Score=66.77 Aligned_cols=39 Identities=21% Similarity=0.454 Sum_probs=31.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~ 208 (277)
.+|+||||||||+++|.|++ +|+|. +|++|++.+|+.++
T Consensus 131 IvGpsGsGKSTLl~lL~gl~---~G~I~------------------~~v~q~~~lf~~ti 169 (305)
T 2v9p_A 131 FIGPPNTGKSMLCNSLIHFL---GGSVL------------------SFANHKSHFWLASL 169 (305)
T ss_dssp EECSSSSSHHHHHHHHHHHH---TCEEE------------------CGGGTTSGGGGGGG
T ss_pred EECCCCCcHHHHHHHHhhhc---CceEE------------------EEecCccccccccH
Confidence 48999999999999999998 68883 45677776666554
No 197
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.00 E-value=0.00092 Score=54.44 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=35.7
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ce-EEEEecCc
Q psy18009 75 TLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RT-TIIVAHRL 120 (277)
Q Consensus 75 al~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~t-iIiIsH~l 120 (277)
+++.+|++||||||++ ++....+.+++++..+.+. ++ +|++||..
T Consensus 79 ~~~~~~~lLilDE~~~-~~~~~~~~l~~li~~~~~~g~~~iiits~~~ 125 (149)
T 2kjq_A 79 DAAFEAEYLAVDQVEK-LGNEEQALLFSIFNRFRNSGKGFLLLGSEYT 125 (149)
T ss_dssp GGGGGCSEEEEESTTC-CCSHHHHHHHHHHHHHHHHTCCEEEEEESSC
T ss_pred HHHhCCCEEEEeCccc-cChHHHHHHHHHHHHHHHcCCcEEEEECCCC
Confidence 4567899999999998 6666688899999988764 56 67777753
No 198
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=96.99 E-value=4.9e-05 Score=66.51 Aligned_cols=61 Identities=7% Similarity=0.028 Sum_probs=46.3
Q ss_pred cccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchh
Q psy18009 53 VPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTI 123 (277)
Q Consensus 53 i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev 123 (277)
-....++..||+||+||+++ ++++.+|+++|||||....+.. +.++ .+.++++++|....+
T Consensus 108 ~~~~~~~~~ls~g~~~r~~~-~~~~~~~~~lilDg~~~~~~~~--------l~~~-~~~~i~v~th~~~~~ 168 (245)
T 2jeo_A 108 EGKTVEVPTYDFVTHSRLPE-TTVVYPADVVLFEGILVFYSQE--------IRDM-FHLRLFVDTDSDVRL 168 (245)
T ss_dssp TTCCEEECCEETTTTEECSS-CEEECCCSEEEEECTTTTTSHH--------HHTT-CSEEEEEECCHHHHH
T ss_pred CCCCeecccccccccCccCc-eEEecCCCEEEEeCccccccHH--------HHHh-cCeEEEEECCHHHHH
Confidence 34456778899999999988 6888899999999999888764 2222 245788899974444
No 199
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=96.92 E-value=0.00011 Score=63.15 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=34.0
Q ss_pred hcCCCCCchhHHHHHHh--ccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLF--RFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~--Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..|+||||||||++.|+ |+.++..|.+++.+..... ......+.++|++|+
T Consensus 35 l~GpnGsGKSTLl~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~ 87 (251)
T 2ehv_A 35 LTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERAR-DLRREMASFGWDFEK 87 (251)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHH-HHHHHHHTTTCCHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEccCCHH-HHHHHHHHcCCChHH
Confidence 37999999999999999 7645566777777654321 112223456676665
No 200
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=96.87 E-value=0.00014 Score=63.59 Aligned_cols=47 Identities=17% Similarity=0.291 Sum_probs=34.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~~ 209 (277)
..|+||||||||++.|.|+. |.+.++ ..++.++|++||+.....++.
T Consensus 30 I~G~~GsGKSTl~k~L~~~l----G~~~~~----------~~~~~i~~v~~d~~~~~l~~~ 76 (245)
T 2jeo_A 30 VSGGTASGKSTVCEKIMELL----GQNEVE----------QRQRKVVILSQDRFYKVLTAE 76 (245)
T ss_dssp EECSTTSSHHHHHHHHHHHH----TGGGSC----------GGGCSEEEEEGGGGBCCCCHH
T ss_pred EECCCCCCHHHHHHHHHHHh----chhccc----------ccCCceEEEeCCcCccccCHh
Confidence 47999999999999999975 333333 246679999999754444443
No 201
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=96.83 E-value=0.00033 Score=59.16 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=28.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhh
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF 204 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~ 204 (277)
..|++|||||||++.|.|+.++ .++|++||+.++
T Consensus 11 i~G~~GsGKSTl~~~l~~~~~~----------------------~i~~v~~d~~~~ 44 (211)
T 3asz_A 11 IAGGTASGKTTLAQALARTLGE----------------------RVALLPMDHYYK 44 (211)
T ss_dssp EEESTTSSHHHHHHHHHHHHGG----------------------GEEEEEGGGCBC
T ss_pred EECCCCCCHHHHHHHHHHHhCC----------------------CeEEEecCcccc
Confidence 4799999999999999998764 488999987554
No 202
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=96.75 E-value=0.00021 Score=60.35 Aligned_cols=48 Identities=23% Similarity=0.258 Sum_probs=35.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
..|++||||||+++.|.|.. |.++++|.++... ....+..+++++|++
T Consensus 34 l~G~~GsGKSTl~~~L~~~~----g~~~i~~d~~~~~-~~~~~~~~g~~~~~~ 81 (200)
T 4eun_A 34 VMGVSGSGKTTIAHGVADET----GLEFAEADAFHSP-ENIATMQRGIPLTDE 81 (200)
T ss_dssp EECCTTSCHHHHHHHHHHHH----CCEEEEGGGGSCH-HHHHHHHTTCCCCHH
T ss_pred EECCCCCCHHHHHHHHHHhh----CCeEEcccccccH-HHHHHHhcCCCCCCc
Confidence 47999999999999999876 8899998776421 112223467888874
No 203
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=96.72 E-value=0.00018 Score=64.50 Aligned_cols=50 Identities=16% Similarity=0.192 Sum_probs=36.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..|++|+|||||+++|+|...+ |.+.++|.++.........+.+++++|+
T Consensus 49 L~Gp~GtGKTtLakala~~~~~--~~i~i~g~~l~~~~~~~~~~~i~~vf~~ 98 (274)
T 2x8a_A 49 LAGPPGCGKTLLAKAVANESGL--NFISVKGPELLNMYVGESERAVRQVFQR 98 (274)
T ss_dssp EESSTTSCHHHHHHHHHHHTTC--EEEEEETTTTCSSTTHHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHcCC--CEEEEEcHHHHhhhhhHHHHHHHHHHHH
Confidence 4799999999999999998776 7899999877543322223345555554
No 204
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=96.70 E-value=0.00062 Score=63.80 Aligned_cols=58 Identities=19% Similarity=0.256 Sum_probs=43.0
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc-CceEEEee
Q psy18009 69 RVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH-ADEILVMH 133 (277)
Q Consensus 69 rv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~-~Drv~vL~ 133 (277)
+.+|+++|..+|++|++|||+ |+++.. .+++....+.+++.++|..+ +.. +||++.|.
T Consensus 199 ~~~l~~~L~~~pd~illdE~~---d~e~~~---~~l~~~~~g~~vi~t~H~~~-~~~~~~rl~~l~ 257 (372)
T 2ewv_A 199 ADALRAALREDPDVIFVGEMR---DLETVE---TALRAAETGHLVFGTLHTNT-AIDTIHRIVDIF 257 (372)
T ss_dssp HHHHHHHTTSCCSEEEESCCC---SHHHHH---HHHHHHTTTCEEEECCCCCS-HHHHHHHHHHTS
T ss_pred HHHHHHHhhhCcCEEEECCCC---CHHHHH---HHHHHHhcCCEEEEEECcch-HHHHHHHHHHhc
Confidence 568999999999999999999 766543 34444444456667889866 554 99987763
No 205
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=96.69 E-value=0.0011 Score=61.64 Aligned_cols=51 Identities=20% Similarity=0.255 Sum_probs=40.1
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccC-------CcHHHHhcceEEEcCC
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT-------VSQASLRQAIGVVPQD 200 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~-------~~~~~~~~~i~~vpqd 200 (277)
+|+||+|||||+++|.|+.+++.|.+.+.|+.... .....+.+.+.++++.
T Consensus 77 iG~nGaGKTTLl~~I~g~~~~~~g~i~~~G~~~~ev~~~i~~~~~~~~~~~v~~~~~~ 134 (347)
T 2obl_A 77 FAGSGVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTS 134 (347)
T ss_dssp EECTTSSHHHHHHHHHHHSCCSEEEEEEESCCHHHHHHHHTTSCHHHHTTEEEEEECT
T ss_pred ECCCCCCHHHHHHHHhcCCCCCEEEEEEecccHHHHHHHHHhhhhhhhhceEEEEECC
Confidence 79999999999999999999999999998865211 1223455668888874
No 206
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=96.66 E-value=0.00039 Score=58.03 Aligned_cols=26 Identities=42% Similarity=0.562 Sum_probs=21.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGD 174 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~ 174 (277)
.+|+||||||||+++|.|+.++..|.
T Consensus 6 l~GpsGaGKsTl~~~L~~~~~~~~~~ 31 (186)
T 3a00_A 6 ISGPSGTGKSTLLKKLFAEYPDSFGF 31 (186)
T ss_dssp EESSSSSSHHHHHHHHHHHCGGGEEC
T ss_pred EECCCCCCHHHHHHHHHhhCCccceE
Confidence 37999999999999999998744333
No 207
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=96.66 E-value=2.1e-05 Score=71.51 Aligned_cols=89 Identities=15% Similarity=0.189 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc-CceEEEeeCcEEEEec--------------------Cc------
Q psy18009 91 ALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH-ADEILVMHAGEIVERG--------------------SL------ 143 (277)
Q Consensus 91 ~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~-~Drv~vL~dG~iv~~g--------------------~~------ 143 (277)
.+|... +.+.+++++ .++|++.|+++.+.. +||+..+.+|+++..+ ..
T Consensus 21 ~~~~~~---l~~~l~~l~--~~Ll~ad~~~~~~~~l~d~v~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~ 95 (295)
T 1ls1_A 21 RITEED---LKATLREIR--RALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVL 95 (295)
T ss_dssp SCCHHH---HHHHHHHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHTTTTTCSCHHHHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred CCCHHH---HHHHHHHHH--HHHHHCCCCHHHHHHHHHHHHHHHccccccccCCcHHHHHHHHHHHHHHHHCCCCceeec
Confidence 345544 444444444 466678999999987 9999988887765210 00
Q ss_pred --eeeehhcCCCCCchhHHHHHHhccccCceeEEEECCEeccC
Q psy18009 144 --FVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT 184 (277)
Q Consensus 144 --~~~~~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~ 184 (277)
......+|.+|+||||++..|+|+..+.+|++.+.+.+...
T Consensus 96 ~~~~~i~i~g~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 96 KDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp CSSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 01112348999999999999999998888999998877654
No 208
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=96.66 E-value=0.0012 Score=55.81 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=26.6
Q ss_pred hcCCCCCchhHHHHHHhccccC-------ceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV-------ESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~-------~~G~i~~~g~~ 181 (277)
.+|+||||||||++.|+|...+ ..+.+++++..
T Consensus 30 l~G~nGsGKSTll~~l~g~~~~~~~~g~~~~~~i~~~~~~ 69 (231)
T 4a74_A 30 VFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTEN 69 (231)
T ss_dssp EEESTTSSHHHHHHHHHHHTTSCGGGTCCSCEEEEEESSS
T ss_pred EECCCCCCHHHHHHHHHHHHhcccccCCCCCEEEEEECCC
Confidence 4799999999999999995544 44588888765
No 209
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=96.63 E-value=0.00035 Score=67.01 Aligned_cols=46 Identities=24% Similarity=0.286 Sum_probs=28.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~ 202 (277)
.+|+||||||||+++|+|+. ++|.++....+...+++++|++|++.
T Consensus 47 LvG~nGaGKSTLln~L~G~~--------l~g~~~~~~~~~~~~~~i~~v~Q~~~ 92 (427)
T 2qag_B 47 CVGETGLGKSTLMDTLFNTK--------FEGEPATHTQPGVQLQSNTYDLQESN 92 (427)
T ss_dssp EECSTTSSSHHHHHHHHTSC--------C-------CCSSCEEEEEEEEEEC--
T ss_pred EECCCCCCHHHHHHHHhCcc--------ccCCcCCCCCccceEeeEEEEeecCc
Confidence 47999999999999999983 33444332222223457999999853
No 210
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=96.62 E-value=0.00036 Score=63.77 Aligned_cols=51 Identities=22% Similarity=0.224 Sum_probs=42.6
Q ss_pred ccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcch
Q psy18009 61 LLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLST 122 (277)
Q Consensus 61 ~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~e 122 (277)
.||+||+||+..+++++.+|+++ ||| +.+.+.++++..+.+++++||..-+
T Consensus 141 ~ls~g~~Q~~~ad~ill~k~dl~--de~---------~~l~~~l~~l~~~~~ii~~sh~~~~ 191 (318)
T 1nij_A 141 QFTIAQSQVGYADRILLTKTDVA--GEA---------EKLHERLARINARAPVYTVTHGDID 191 (318)
T ss_dssp HCHHHHHHHHTCSEEEEECTTTC--SCT---------HHHHHHHHHHCSSSCEEECCSSCCC
T ss_pred hchHHHHHHHhCCEEEEECcccC--CHH---------HHHHHHHHHhCCCCeEEEecccCCC
Confidence 48999999998888888888887 888 6788888888766788889996433
No 211
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=96.59 E-value=0.00032 Score=64.13 Aligned_cols=55 Identities=25% Similarity=0.224 Sum_probs=38.1
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcc
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLS 121 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ 121 (277)
++..++||++||||++.+|+.++| .||+.....+.+.++.+.+ +.++|++||...
T Consensus 203 ~~eLs~~r~~iaRal~~~P~~~lL-----vLDa~t~~~~~~~~~~~~~~~~~t~iivTh~d~ 259 (304)
T 1rj9_A 203 MEELKKVKRAIAKADPEEPKEVWL-----VLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDG 259 (304)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEE-----EEETTBCTHHHHHHHHHHHHHCCSEEEEECTTS
T ss_pred HHHHHHHHHHHHHhhcCCCCeEEE-----EEcHHHHHHHHHHHHHHHHHcCCcEEEEECCcc
Confidence 455669999999999999994333 3444444455566666643 458999999843
No 212
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=96.59 E-value=0.00044 Score=63.14 Aligned_cols=36 Identities=33% Similarity=0.505 Sum_probs=32.2
Q ss_pred hcCCCCCchhHHHHHHhccc--------cCceeEEEECCEeccC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY--------DVESGDIFIDNQNIKT 184 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~--------~~~~G~i~~~g~~~~~ 184 (277)
..|.+|||||||++.|.|.. .++.|+|.++|..+..
T Consensus 9 i~G~~GaGKTTll~~l~~~~~~~~~aVi~~d~G~i~idg~~l~~ 52 (318)
T 1nij_A 9 LTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGD 52 (318)
T ss_dssp EEESSSSSCHHHHHHHHHSCCCCCEEEECSSCCSCCEEEEEECT
T ss_pred EEecCCCCHHHHHHHHHhhcCCCcEEEEEecCcccCccHHHHhC
Confidence 47999999999999999987 6789999999988754
No 213
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=96.57 E-value=0.0036 Score=59.37 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=41.6
Q ss_pred cCCCEEEEecCCCCCCHHHH------------HHHHHHHHHHhc--CceEEEEecCcc------------------h-hc
Q psy18009 78 KAPQIVLLDEATSALDTKTE------------RNIQSALNRVCA--SRTTIIVAHRLS------------------T-II 124 (277)
Q Consensus 78 ~~p~ilILDEPTa~LD~~~~------------~~l~~~l~~l~~--~~tiIiIsH~l~------------------e-v~ 124 (277)
.+|+++++|||++.+++... ..++..|+++.+ +.++|+++|... . +.
T Consensus 272 ~~~~llVIDs~t~~~~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIlv~Hv~~~~~g~~~~~g~~~~p~gg~~l~ 351 (400)
T 3lda_A 272 SRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMA 351 (400)
T ss_dssp SCEEEEEEETGGGGCC------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC--------------------CHHH
T ss_pred cCCceEEecchhhhCchhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeecccCCccccccCCCccCCchhHHH
Confidence 57999999999999996432 456777777754 468888999821 1 34
Q ss_pred c-CceEEEeeCcE
Q psy18009 125 H-ADEILVMHAGE 136 (277)
Q Consensus 125 ~-~Drv~vL~dG~ 136 (277)
+ +|.+++|++|+
T Consensus 352 ~~ad~vl~L~~~~ 364 (400)
T 3lda_A 352 YSSTTRLGFKKGK 364 (400)
T ss_dssp HHCSEEEEEEECS
T ss_pred HhcceEEEEEecC
Confidence 4 89999998763
No 214
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=96.55 E-value=4.3e-06 Score=69.83 Aligned_cols=76 Identities=8% Similarity=-0.001 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHH------HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEecC-cchhcc-CceEEEee
Q psy18009 63 SGGEKQRVAIAR------TLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHR-LSTIIH-ADEILVMH 133 (277)
Q Consensus 63 SgGqrQrv~IAr------al~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIsH~-l~ev~~-~Drv~vL~ 133 (277)
|+|++|++.++. ++..+++...+|+ ++|+..... ++.+..+.+. .++|.+||. ++++.. ||+|+ +
T Consensus 96 s~g~~~~~~~i~L~~~~e~l~~R~~~r~~d~---~ld~~~~~~-~~~~~~~~~~~~~ii~tsh~~~~~~e~~~~~i~--~ 169 (189)
T 2bdt_A 96 AKVDDVEIRFIILWTNREELLRRDALRKKDE---QMGERCLEL-VEEFESKGIDERYFYNTSHLQPTNLNDIVKNLK--T 169 (189)
T ss_dssp HHCSSEEEEEEEEECCHHHHHHHTTTSCC-------CGGGGHH-HHHHHHTTCCTTSEEECSSSCGGGHHHHHHHHH--H
T ss_pred hcccCCCeEEEEEeCCHHHHHHHHHhccccc---cCCHHHHHH-HHHHhhcCCCccEEEeCCCCChhhHHHHHHHHh--h
Confidence 666666666666 6666776666773 789988888 8888887654 477778999 999987 99998 9
Q ss_pred CcEEEEecCce
Q psy18009 134 AGEIVERGSLF 144 (277)
Q Consensus 134 dG~iv~~g~~~ 144 (277)
+|+++..|+..
T Consensus 170 ~g~~~~~~~~~ 180 (189)
T 2bdt_A 170 NPRFIFCMAGD 180 (189)
T ss_dssp CGGGSCC----
T ss_pred CCcEEEeecCC
Confidence 99998877653
No 215
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=96.55 E-value=0.00016 Score=67.37 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=74.8
Q ss_pred EEeeeeee---eCc-hHHhh---------cccCcccccCCeeec------------------------------------
Q psy18009 31 EFRNVSFS---YTP-ERAIL---------KNISFTVPAGKTLAL------------------------------------ 61 (277)
Q Consensus 31 ~~~nvsf~---Y~~-~~~vL---------~~l~l~i~~~~~v~~------------------------------------ 61 (277)
+|+|++|+ |++ ...+| +.+++.+.+|+.+..
T Consensus 137 ~f~~v~f~~~~Y~~~~~~vL~~~~~~~~~~~l~~~i~~G~~i~ivG~sGsGKSTll~~l~~~~~~~~g~I~ie~~~e~~~ 216 (361)
T 2gza_A 137 FFKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFL 216 (361)
T ss_dssp TTSCCCCSCSCCCHHHHHHHHHHHHTCHHHHHHHHHHTTCCEEEEESSSSCHHHHHHHHHTTSCTTSCEEEEESSSCCCC
T ss_pred CcCccccccccccchhHHHHhhhhhHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHhcCCCCceEEEECCccccCc
Confidence 79999999 864 34566 899999999997653
Q ss_pred ---------cC---------HHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCc-eEEEEecCcch
Q psy18009 62 ---------LS---------GGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR-TTIIVAHRLST 122 (277)
Q Consensus 62 ---------LS---------gGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~-tiIiIsH~l~e 122 (277)
.. ++..++..|+.++..+|+.+++||+.. ....+.++.+..+. +++...|..+.
T Consensus 217 ~~~~~~v~~v~~q~~~~~~~~~~t~~~~i~~~l~~~pd~~l~~e~r~-------~~~~~~l~~l~~g~~~~l~t~H~~~~ 289 (361)
T 2gza_A 217 PDHPNHVHLFYPSEAKEEENAPVTAATLLRSCLRMKPTRILLAELRG-------GEAYDFINVAASGHGGSITSCHAGSC 289 (361)
T ss_dssp TTCSSEEEEECC----------CCHHHHHHHHTTSCCSEEEESCCCS-------THHHHHHHHHHTTCCSCEEEEECSSH
T ss_pred cccCCEEEEeecCccccccccccCHHHHHHHHHhcCCCEEEEcCchH-------HHHHHHHHHHhcCCCeEEEEECCCCH
Confidence 11 445678889999999999999999986 24566777776654 66778899764
Q ss_pred hccCceEEEeeCcE
Q psy18009 123 IIHADEILVMHAGE 136 (277)
Q Consensus 123 v~~~Drv~vL~dG~ 136 (277)
...+||+..|..|.
T Consensus 290 ~~~~~Rl~~l~~~~ 303 (361)
T 2gza_A 290 ELTFERLALMVLQN 303 (361)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcc
Confidence 44599999987763
No 216
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=96.52 E-value=0.00059 Score=57.94 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=27.9
Q ss_pred hcCCCCCchhHHHHHHhccccC---ceeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV---ESGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~---~~G~i~~~g~~~ 182 (277)
..|+||||||||+++|.|+.++ ..|.|.++|..+
T Consensus 27 I~G~sGsGKSTl~~~l~~~~~~~g~~~g~v~~d~~~~ 63 (208)
T 3c8u_A 27 LSGAPGSGKSTLSNPLAAALSAQGLPAEVVPMDGFHL 63 (208)
T ss_dssp EECCTTSCTHHHHHHHHHHHHHTTCCEEEEESGGGBC
T ss_pred EECCCCCCHHHHHHHHHHHHhhcCCceEEEecCCCcC
Confidence 4899999999999999999985 367777776544
No 217
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=96.51 E-value=0.00085 Score=60.89 Aligned_cols=49 Identities=33% Similarity=0.322 Sum_probs=22.7
Q ss_pred hhcCCCCCchhHHHHHHhcc-ccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF-YDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl-~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..+|.+|+|||||++.|+|. ..+.+| +.++|.++.... . ...+++++|+
T Consensus 22 ~lvG~nG~GKSTLl~~L~g~~~~~~~g-i~~~g~~~~~t~--~-~~~~~~~~q~ 71 (301)
T 2qnr_A 22 MVVGESGLGKSTLINSLFLTDLYPERV-ISGAAEKIERTV--Q-IEASTVEIEE 71 (301)
T ss_dssp EEEEETTSSHHHHHHHHHC----------------------------CEEEEC-
T ss_pred EEECCCCCCHHHHHHHHhCCCccCCCC-cccCCcccCCcc--e-EeeEEEEecC
Confidence 45799999999999999998 777888 888887664311 1 2458888885
No 218
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=96.48 E-value=0.00075 Score=61.26 Aligned_cols=47 Identities=21% Similarity=0.272 Sum_probs=36.6
Q ss_pred hcCCCCCchhHHHHHHhcccc--CceeEEEE---CCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD--VESGDIFI---DNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~--~~~G~i~~---~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..|++|||||||++.|.|+.+ +.+|+|.+ +|.... . ..++.++++ |+
T Consensus 85 I~G~~GsGKSTl~~~L~~~l~~~~~~G~i~vi~~d~~~~~---~-~~~~~~~~v-q~ 136 (308)
T 1sq5_A 85 IAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHP---N-QVLKERGLM-KK 136 (308)
T ss_dssp EEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCC---H-HHHHHHTCT-TC
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCCCeEEEEecCCccCc---H-HHHHhCCEe-ec
Confidence 379999999999999999988 88999999 886532 2 223447777 64
No 219
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=96.46 E-value=0.00063 Score=64.96 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~ 183 (277)
..|++|||||||+++|.|+.++..|+|.+.|.++.
T Consensus 172 I~GpnGSGKTTlL~allg~l~~~~g~I~~~ed~ie 206 (418)
T 1p9r_A 172 VTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIE 206 (418)
T ss_dssp EECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCC
T ss_pred EECCCCCCHHHHHHHHHhhcCCCCCEEEEecccch
Confidence 36999999999999999999998999999887764
No 220
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=96.46 E-value=0.0023 Score=63.74 Aligned_cols=66 Identities=12% Similarity=0.306 Sum_probs=49.6
Q ss_pred ccCCCEEEEecC------CCCCCHHHHHHHHHHHHHHh-cC-c-eEEEEecCcchhc------------c-CceEEEeeC
Q psy18009 77 LKAPQIVLLDEA------TSALDTKTERNIQSALNRVC-AS-R-TTIIVAHRLSTII------------H-ADEILVMHA 134 (277)
Q Consensus 77 ~~~p~ilILDEP------Ta~LD~~~~~~l~~~l~~l~-~~-~-tiIiIsH~l~ev~------------~-~Drv~vL~d 134 (277)
...|+++|+||| |++||+...+.+.++++++. +. + ++++++|+++... . ...|.|+.+
T Consensus 144 ~~~p~LlLlDePGi~~~~t~~LD~~~~~~i~~li~~~l~~~~~iil~vvt~~~d~a~~~~l~la~~v~~~g~rtI~VlTK 223 (608)
T 3szr_A 144 RDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTK 223 (608)
T ss_dssp SSSCCEEEEECCC------CCSSCSHHHHHHHHHHHHTTSSSCCEEEEEESSSCTTTCHHHHHHHHHCSSCCSEEEEEEC
T ss_pred CCCCceeEeeCCCccccccCCCCHHHHHHHHHHHHHHHhcCCCCceEEEeccchhccHHHHHHHHHHhhcCCceEEEecc
Confidence 457999999999 99999999999999999964 33 3 4445999987431 1 356788888
Q ss_pred cEEEEecC
Q psy18009 135 GEIVERGS 142 (277)
Q Consensus 135 G~iv~~g~ 142 (277)
+.++..|+
T Consensus 224 ~Dlv~~g~ 231 (608)
T 3szr_A 224 PDLVDKGT 231 (608)
T ss_dssp GGGSSSSS
T ss_pred hhhcCccc
Confidence 87776655
No 221
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=96.41 E-value=0.0014 Score=64.12 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=29.7
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
.|++||||||++++|.|+.++..|.|.++|..
T Consensus 266 ~GptGSGKTTlL~aL~~~i~~~~giitied~~ 297 (511)
T 2oap_1 266 VGETASGKTTTLNAIMMFIPPDAKVVSIEDTR 297 (511)
T ss_dssp EESTTSSHHHHHHHHGGGSCTTCCEEEEESSC
T ss_pred ECCCCCCHHHHHHHHHhhCCCCCCEEEEcCcc
Confidence 58999999999999999999999999999864
No 222
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=96.40 E-value=0.0023 Score=53.12 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=31.2
Q ss_pred eehhcCCCCCchhHHHHHHhccccC-----------ceeEEEECCEecc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFYDV-----------ESGDIFIDNQNIK 183 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~~~-----------~~G~i~~~g~~~~ 183 (277)
....+|.+|+|||||++.+.|...+ ..|.+.++|+++.
T Consensus 31 kv~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~~ 79 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 79 (191)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSCCCCSCCCCCSEEEEEEEEEETTEEEE
T ss_pred EEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceEEEEEEEEECCEEEE
Confidence 3445899999999999999998754 5789999997653
No 223
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.39 E-value=0.00078 Score=61.17 Aligned_cols=52 Identities=25% Similarity=0.300 Sum_probs=29.6
Q ss_pred hhcCCCCCchhHHHHHHhc-cccCceeEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 148 LQVGQSGAGKSTIIRLLFR-FYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~G-l~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
...|++|+||||++++++| +..+..|.+.++|....... ..+..++++++++
T Consensus 40 ll~Gp~G~GKTtl~~~la~~l~~~~~g~i~~~~~~~~~~~--~~~~~~~~~~~~~ 92 (354)
T 1sxj_E 40 LLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTAS--NRKLELNVVSSPY 92 (354)
T ss_dssp EEECSTTSSHHHHHHTHHHHHSCTTCCC--------------------CCEECSS
T ss_pred EEECCCCCCHHHHHHHHHHHHcCCCCCeEEecceeecccc--cccceeeeecccc
Confidence 3479999999999999999 78888999999987664322 2245577888764
No 224
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=96.38 E-value=0.0096 Score=55.23 Aligned_cols=76 Identities=20% Similarity=0.302 Sum_probs=51.1
Q ss_pred HHHHHHHHHhccC--CCEEEEecCCCCCC----------H---HHHHHHHHHHHHH----hc-CceEEEEecCcch----
Q psy18009 67 KQRVAIARTLLKA--PQIVLLDEATSALD----------T---KTERNIQSALNRV----CA-SRTTIIVAHRLST---- 122 (277)
Q Consensus 67 rQrv~IAral~~~--p~ilILDEPTa~LD----------~---~~~~~l~~~l~~l----~~-~~tiIiIsH~l~e---- 122 (277)
.|.+.++++++.. |+++|+||+++.+. + ...+.+.+.++++ ++ +.++|+++|-...
T Consensus 125 e~~l~~~~~l~~~~~~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~inh~~~~~~~~ 204 (349)
T 2zr9_A 125 EQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINELREKIGVM 204 (349)
T ss_dssp HHHHHHHHHHHTTTCCSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEEEEECC------
T ss_pred HHHHHHHHHHHhcCCCCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEEEeccccccCcc
Confidence 4567788888754 99999999999984 2 1222344555554 33 5678889996531
Q ss_pred ------------hcc-CceEEEeeCcEEEEecC
Q psy18009 123 ------------IIH-ADEILVMHAGEIVERGS 142 (277)
Q Consensus 123 ------------v~~-~Drv~vL~dG~iv~~g~ 142 (277)
+.. ||.++.++.++++..|+
T Consensus 205 ~~~p~~~~gg~~l~~~ad~~l~lrr~~~~k~g~ 237 (349)
T 2zr9_A 205 FGSPETTTGGKALKFYASVRLDVRRIETLKDGT 237 (349)
T ss_dssp -----CCSSHHHHHHHCSEEEEEEEEEEECSSS
T ss_pred cCCCcccCCchHhhhccceEEEEEEeeeeecCc
Confidence 344 99999999887766554
No 225
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=96.37 E-value=0.00014 Score=67.45 Aligned_cols=74 Identities=12% Similarity=0.040 Sum_probs=52.4
Q ss_pred eccCHHHHHHHHHHHHhc-cCCCEEEEec---CC------CCCCHHHHHHHHHHHHHHhc--CceEEEEecCcchhcc-C
Q psy18009 60 ALLSGGEKQRVAIARTLL-KAPQIVLLDE---AT------SALDTKTERNIQSALNRVCA--SRTTIIVAHRLSTIIH-A 126 (277)
Q Consensus 60 ~~LSgGqrQrv~IAral~-~~p~ilILDE---PT------a~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ev~~-~ 126 (277)
..+|+|++|+..+++++. .+|++++||| |+ .++|+..+..+.+.++++.+ +.++++++|. .+... +
T Consensus 257 ~~~~~~~~~~~~i~~~~~~~~~~lllLdE~~~p~~~~g~~~sld~~~r~~l~~~l~~l~~~~~~~ililde~-~~~~r~~ 335 (365)
T 1lw7_A 257 FCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWVDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESP-SYLDRYN 335 (365)
T ss_dssp HHHHHHSCCCHHHHHHHHHSCCSEEEEEECCCC-----------CCSHHHHHHHHHHHHHGGGCCCEEEECS-SHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHhhcCCCEEEECCCCCCcccCCCcCCccHHHHHHHHHHHHHHHHHcCCCEEEeCCC-CHHHHHH
Confidence 346677788888888774 6999999999 65 58999999999999988754 5688888876 34443 6
Q ss_pred ceEEEeeC
Q psy18009 127 DEILVMHA 134 (277)
Q Consensus 127 Drv~vL~d 134 (277)
+++.++++
T Consensus 336 ~~i~~i~~ 343 (365)
T 1lw7_A 336 QVKAVIEK 343 (365)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666543
No 226
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=96.32 E-value=0.0011 Score=60.34 Aligned_cols=19 Identities=42% Similarity=0.588 Sum_probs=16.8
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
.+|+||||||+|+++|+.+
T Consensus 29 i~G~NGsGKS~ll~ai~~l 47 (322)
T 1e69_A 29 IVGPNGSGKSNIIDAIKWV 47 (322)
T ss_dssp EECCTTTCSTHHHHHHHHT
T ss_pred EECCCCCcHHHHHHHHHHH
Confidence 4799999999999999843
No 227
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=96.21 E-value=0.0095 Score=50.66 Aligned_cols=57 Identities=25% Similarity=0.321 Sum_probs=39.2
Q ss_pred cCCCEEEEecCCCCC--CHHHHHHHHHHHHHH-hc-CceEEEEecCcch--------hcc-CceEEEeeC
Q psy18009 78 KAPQIVLLDEATSAL--DTKTERNIQSALNRV-CA-SRTTIIVAHRLST--------IIH-ADEILVMHA 134 (277)
Q Consensus 78 ~~p~ilILDEPTa~L--D~~~~~~l~~~l~~l-~~-~~tiIiIsH~l~e--------v~~-~Drv~vL~d 134 (277)
.+|+++++|+|++.+ |+.....++..+.++ ++ +.++|+++|...+ +.. ||.|+.|+.
T Consensus 127 ~~~~~vviD~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~D~vi~L~~ 196 (247)
T 2dr3_A 127 INAKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIFVSQVSVGERGFGGPGVEHGVDGIIRLDL 196 (247)
T ss_dssp HTCCEEEEETSGGGTTTCGGGHHHHHHHHHHHHHHTTCEEEEEEECC----CCC-CCHHHHSSEEEEEEE
T ss_pred hCCCEEEECCchHhhcCCHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcccccccccceeEEEEEEEEE
Confidence 589999999999988 553344444444443 44 4588889998765 344 999999975
No 228
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=96.20 E-value=0.0019 Score=55.46 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=12.5
Q ss_pred hcCCCCCchhHHHHHHh-ccccC
Q psy18009 149 QVGQSGAGKSTIIRLLF-RFYDV 170 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~-Gl~~~ 170 (277)
.+|+||||||||++.|. |+.++
T Consensus 32 l~Gp~GsGKSTl~~~L~~~~~~~ 54 (231)
T 3lnc_A 32 LSSPSGCGKTTVANKLLEKQKNN 54 (231)
T ss_dssp EECSCC----CHHHHHHC----C
T ss_pred EECCCCCCHHHHHHHHHhcCCCC
Confidence 47999999999999999 99854
No 229
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=96.14 E-value=0.0011 Score=55.33 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=31.4
Q ss_pred hcCCCCCchhHHHHHHhccccCcee-EEEECCEeccCCcHHHHhcceEEEcCCch
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG-DIFIDNQNIKTVSQASLRQAIGVVPQDTV 202 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~~i~~vpqd~~ 202 (277)
..|++||||||+++.|.+...+..| .+ +....... .....+++|+++++.
T Consensus 11 l~G~~GsGKSTl~~~L~~~~~~~~~~~i---~~~~~~~~-~~~~~~~~~~~~~~~ 61 (207)
T 2j41_A 11 LSGPSGVGKGTVRKRIFEDPSTSYKYSI---SMTTRQMR-EGEVDGVDYFFKTRD 61 (207)
T ss_dssp EECSTTSCHHHHHHHHHHCTTCCEECCC---CEECSCCC-TTCCBTTTBEECCHH
T ss_pred EECCCCCCHHHHHHHHHHhhCCCeEEec---ccccCCCC-CCccCCCceEEcCHH
Confidence 4799999999999999999866555 22 11111111 112235778888754
No 230
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=96.12 E-value=0.0016 Score=53.89 Aligned_cols=44 Identities=25% Similarity=0.298 Sum_probs=32.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
.+|+||||||||++.|.+ +..|.++++|.++... ..+++++|+.
T Consensus 7 l~G~~GaGKSTl~~~L~~---~~~g~~~i~~d~~~~~------~~~~~~~~~~ 50 (189)
T 2bdt_A 7 ITGPAGVGKSTTCKRLAA---QLDNSAYIEGDIINHM------VVGGYRPPWE 50 (189)
T ss_dssp EECSTTSSHHHHHHHHHH---HSSSEEEEEHHHHHTT------CCTTCCCGGG
T ss_pred EECCCCCcHHHHHHHHhc---ccCCeEEEcccchhhh------hccccccCcc
Confidence 479999999999999986 4568899987654321 2356777753
No 231
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=96.11 E-value=0.00031 Score=61.18 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=42.1
Q ss_pred cCCeeeccCHHHHHHHHHHHHh-ccCCCEEEEe----cCCCCCCHHHHHHHHHHHHHHhcC
Q psy18009 55 AGKTLALLSGGEKQRVAIARTL-LKAPQIVLLD----EATSALDTKTERNIQSALNRVCAS 110 (277)
Q Consensus 55 ~~~~v~~LSgGqrQrv~IAral-~~~p~ilILD----EPTa~LD~~~~~~l~~~l~~l~~~ 110 (277)
.++.+..||| |+ +|+ +.+|++++|| |||++||+...+.+.+.++.+.+.
T Consensus 146 ~~r~~~~lSg----rv---~al~~~~P~~lllD~~~~EP~~~ld~~~~~~i~~~l~~~~~~ 199 (246)
T 2bbw_A 146 SRRWIHPPSG----RV---YNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDV 199 (246)
T ss_dssp HTEEEETTTT----EE---EETTTSCCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHH
T ss_pred HcCCCcCCCC----Cc---cccccCCCcccccccccccccccCCCCcHHHHHHHHHHHHHh
Confidence 3567788998 55 777 8999999999 999999999999999999887654
No 232
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=96.08 E-value=0.00046 Score=60.10 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=29.7
Q ss_pred hhcCCCCCchhHHHHHHh---ccccCceeEEEECCEe
Q psy18009 148 LQVGQSGAGKSTIIRLLF---RFYDVESGDIFIDNQN 181 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~---Gl~~~~~G~i~~~g~~ 181 (277)
...|+||||||||++.|+ |+..++.|.+.++|.+
T Consensus 31 ~l~G~~GsGKSTl~k~La~~lg~~~~~~G~i~~~~~~ 67 (246)
T 2bbw_A 31 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIK 67 (246)
T ss_dssp EEECCTTSSHHHHHHHHHHHHCCCCEEHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHhCCeEecHHHHHHHHHh
Confidence 347999999999999999 9999999998877643
No 233
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=95.96 E-value=0.00043 Score=63.43 Aligned_cols=55 Identities=18% Similarity=0.321 Sum_probs=36.2
Q ss_pred hcCCCCCchhHHHHHHhccc----cCceeEEEECCEeccCCcHHHHhcceEEEcCCchh
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY----DVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVL 203 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~----~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~ 203 (277)
..|++|+|||||+++|+|.. .+.+|.+..++.++........+..|.|++|...+
T Consensus 56 l~Gp~G~GKTTLa~~ia~~l~~~~~~~sg~~~~~~~~l~~~~~~~~~~~v~~iDE~~~l 114 (334)
T 1in4_A 56 LAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILTSLERGDVLFIDEIHRL 114 (334)
T ss_dssp EESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHHHHHHHHHCCTTCEEEEETGGGC
T ss_pred EECCCCCcHHHHHHHHHHHhCCCEEEEechHhcCHHHHHHHHHHccCCCEEEEcchhhc
Confidence 47999999999999999987 55566665554433211111123469999986433
No 234
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=95.93 E-value=0.00025 Score=64.39 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=31.5
Q ss_pred eeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHH
Q psy18009 58 TLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTK 95 (277)
Q Consensus 58 ~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~ 95 (277)
.-..+||||+||+++|++...+|+|||+|||++++|+.
T Consensus 131 y~~~~sgGq~~R~~~a~~~~~~~~IlIlEG~~~~ld~~ 168 (290)
T 1odf_A 131 YDKSQFKGEGDRCPTGQKIKLPVDIFILEGWFLGFNPI 168 (290)
T ss_dssp EETTHHHHTCEECSSCEEEESSCSEEEEEESSTTCCCC
T ss_pred CccccCCccccccccccceEcCCCEEEEeCccccCCcc
Confidence 34569999999999984333399999999999999985
No 235
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=95.91 E-value=0.0014 Score=54.08 Aligned_cols=17 Identities=47% Similarity=0.757 Sum_probs=14.7
Q ss_pred hcCCCCCchhHHHHHHh
Q psy18009 149 QVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~ 165 (277)
.+|+||||||||+++++
T Consensus 14 l~G~nGsGKSTl~~~~~ 30 (171)
T 4gp7_A 14 LIGSSGSGKSTFAKKHF 30 (171)
T ss_dssp EECCTTSCHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHc
Confidence 48999999999999644
No 236
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=95.85 E-value=0.022 Score=54.24 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=53.4
Q ss_pred ccCHHHHHHHHHHHHhc--cCCCEEEEecCCCCCCH--------HHHHHHHHHHHHHhc--CceEEEEec---------C
Q psy18009 61 LLSGGEKQRVAIARTLL--KAPQIVLLDEATSALDT--------KTERNIQSALNRVCA--SRTTIIVAH---------R 119 (277)
Q Consensus 61 ~LSgGqrQrv~IAral~--~~p~ilILDEPTa~LD~--------~~~~~l~~~l~~l~~--~~tiIiIsH---------~ 119 (277)
.+|+++.+ +.++.+. .+|+++|+|+++...+. .+...+.+.|+.+++ +.++|+++| +
T Consensus 295 ~~s~~~i~--~~~~~l~~~~~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~sql~r~~e~~~~ 372 (454)
T 2r6a_A 295 SIRVSDIR--AKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQD 372 (454)
T ss_dssp TCCHHHHH--HHHHHHHTTTCCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSTTC--
T ss_pred CCCHHHHH--HHHHHHHHHcCCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecCCcccccCCC
Confidence 47888876 5666665 68999999999998742 344566667777754 457888999 1
Q ss_pred --cc--------hhcc-CceEEEeeCcEE
Q psy18009 120 --LS--------TIIH-ADEILVMHAGEI 137 (277)
Q Consensus 120 --l~--------ev~~-~Drv~vL~dG~i 137 (277)
+. .+.. ||.|++|..++.
T Consensus 373 ~~p~lsdlr~Sg~ie~~aD~vi~l~r~~~ 401 (454)
T 2r6a_A 373 KRPMMSDIRESGSIEQDADIVAFLYRDDY 401 (454)
T ss_dssp -CCCTHHHHTTCSHHHHCSEEEEEEETTC
T ss_pred CCCcHHHhhccchhHhhCCEEEEEecccc
Confidence 22 3454 999999987654
No 237
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=95.84 E-value=0.0051 Score=51.08 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=28.9
Q ss_pred ehhcCCCCCchhHHHHHHhcccc-----------CceeEEEECCEec
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFYD-----------VESGDIFIDNQNI 182 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~~-----------~~~G~i~~~g~~~ 182 (277)
+..+|.+|+|||||++.|.|... +..|.+.++|+.+
T Consensus 8 v~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~ 54 (199)
T 2f9l_A 8 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 54 (199)
T ss_dssp EEEESSTTSSHHHHHHHHHHSCCCC---CCCSCEEEEEEEEETTEEE
T ss_pred EEEECcCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEE
Confidence 34579999999999999999742 2368899999765
No 238
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=95.81 E-value=0.00051 Score=58.40 Aligned_cols=54 Identities=24% Similarity=0.311 Sum_probs=38.6
Q ss_pred hhcCCCCCchhHHHHHHhccc---cCceeEEEE--------CCEeccC-CcHHHHhcceEEEcCCc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY---DVESGDIFI--------DNQNIKT-VSQASLRQAIGVVPQDT 201 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~---~~~~G~i~~--------~g~~~~~-~~~~~~~~~i~~vpqd~ 201 (277)
...|++||||||+++.|.+.+ .++.|.+.. +|.++.. .....+++.+++++|++
T Consensus 9 ~i~G~~GsGKSTl~~~L~~~~g~~~~d~g~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (227)
T 1cke_A 9 TIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVST 74 (227)
T ss_dssp EEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHTCCEEEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCcccCcceeehhhHHHHHcCCCccCHHHHHHHHHhCceeeecc
Confidence 347999999999999998765 567788776 5655432 22344666788888763
No 239
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=95.73 E-value=0.0011 Score=54.84 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=41.5
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEec
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAH 118 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH 118 (277)
+..+..+|+|++|+++++|++.++|+++ +|+...+.+++.++.+.....+++.++
T Consensus 104 ~~~~~~ls~~~~~~v~~~R~~~r~~~~l--------ld~~~~~~~~~~~~~l~~~~~~~i~t~ 158 (191)
T 1zp6_A 104 ARPLHYIVLRTTAAEAIERCLDRGGDSL--------SDPLVVADLHSQFADLGAFEHHVLPVS 158 (191)
T ss_dssp CSCEEEEEEECCHHHHHHHHHTTCTTSC--------CCHHHHHHHHHHTTCCGGGGGGEEECT
T ss_pred CCCeEEEEecCCHHHHHHHHHhcCCCcc--------CCHHHHHHHHHHHhccCcccccEEECC
Confidence 4457789999999999999999999876 688888878777766644333344444
No 240
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=95.58 E-value=0.0019 Score=54.27 Aligned_cols=47 Identities=28% Similarity=0.516 Sum_probs=35.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEE--EECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDI--FIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i--~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..|++||||||++++|.+... ..|.+ +++|..+.. .+..+++|.+++
T Consensus 30 l~G~sGsGKSTl~~~La~~l~-~~G~~~~~~d~d~~~~----~~~~~~~~~~~~ 78 (200)
T 3uie_A 30 VTGLSGSGKSTLACALNQMLY-QKGKLCYILDGDNVRH----GLNRDLSFKAED 78 (200)
T ss_dssp EECSTTSSHHHHHHHHHHHHH-HTTCCEEEEEHHHHTT----TTTTTCCSSHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH-hcCceEEEecCchhhh----HhhcccCcChHH
Confidence 479999999999999999887 56887 888876542 123456666665
No 241
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=95.55 E-value=0.0034 Score=59.86 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=44.1
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC-ceEEEEe
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVA 117 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~-~tiIiIs 117 (277)
..++..||+|++|+++++++|+..|.+|++ +.+|....+.+..+.+.+.+. .+++++|
T Consensus 247 ~~~~~~ls~g~~el~~la~aL~~~P~ILVl----NKlDl~~~~~~~~l~~~l~~~g~~vi~iS 305 (416)
T 1udx_A 247 DEPLKTLETLRKEVGAYDPALLRRPSLVAL----NKVDLLEEEAVKALADALAREGLAVLPVS 305 (416)
T ss_dssp SCHHHHHHHHHHHHHHHCHHHHHSCEEEEE----ECCTTSCHHHHHHHHHHHHTTTSCEEECC
T ss_pred cCCHHHHHHHHHHHHHHhHHhhcCCEEEEE----ECCChhhHHHHHHHHHHHHhcCCeEEEEE
Confidence 567788999999999999999999999999 899987664333333444443 4666655
No 242
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=95.47 E-value=0.0086 Score=61.22 Aligned_cols=72 Identities=17% Similarity=0.156 Sum_probs=55.8
Q ss_pred CCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCC-CCCHHHHHHHHHHHHHHhcCc-eEEE-EecCcchhcc-Cc
Q psy18009 56 GKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATS-ALDTKTERNIQSALNRVCASR-TTII-VAHRLSTIIH-AD 127 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa-~LD~~~~~~l~~~l~~l~~~~-tiIi-IsH~l~ev~~-~D 127 (277)
+..+..+|.|+.++..++++++.+++++|+|||.. +||......+++.+.....+. ++++ .||+.+.+.. ++
T Consensus 185 ~~~I~v~T~G~l~r~l~~~~~l~~~~~lIlDEah~R~ld~d~~~~~l~~l~~~~~~~~iIl~SAT~~~~~l~~~~~ 260 (773)
T 2xau_A 185 KTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN 260 (773)
T ss_dssp TCSEEEEEHHHHHHHHHHSTTCTTEEEEEECSGGGCCHHHHHHHHHHHHHHHHCTTCEEEEEESCSCCHHHHHHTT
T ss_pred CCCEEEECHHHHHHHHhhCccccCCCEEEecCccccccchHHHHHHHHHHHHhCCCceEEEEeccccHHHHHHHhc
Confidence 44566799999999999999999999999999996 999877666666666555444 5555 5898877653 44
No 243
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=95.41 E-value=0.0027 Score=54.10 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=27.5
Q ss_pred hcCCCCCchhHHHHHHhc--cccC-----ceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFR--FYDV-----ESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G--l~~~-----~~G~i~~~g~~ 181 (277)
..|++|+|||||++.|++ +.++ ..|.+++++..
T Consensus 29 i~G~~GsGKTtl~~~l~~~~~~~~~~g~~~~~~~~i~~~~ 68 (243)
T 1n0w_A 29 MFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEG 68 (243)
T ss_dssp EECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSS
T ss_pred EECCCCCcHHHHHHHHHHHHhCchhcCCCCCeEEEEECCC
Confidence 379999999999999999 4554 56889998875
No 244
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=95.31 E-value=0.00088 Score=58.28 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=28.0
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~ 183 (277)
..|++|+|||||+++|++... .|.+.++|.++.
T Consensus 54 l~G~~G~GKTtl~~~i~~~~~--~~~i~~~~~~~~ 86 (254)
T 1ixz_A 54 LVGPPGVGKTHLARAVAGEAR--VPFITASGSDFV 86 (254)
T ss_dssp EECCTTSSHHHHHHHHHHHTT--CCEEEEEHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhC--CCEEEeeHHHHH
Confidence 379999999999999999875 688999886653
No 245
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=95.28 E-value=0.0037 Score=58.33 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=27.2
Q ss_pred hcCCCCCchhHHHHHHhccccCc-eeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE-SGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~-~G~i~~~g~~~ 182 (277)
..|++|||||||+++|.|+.++. +|.|...+.++
T Consensus 128 I~GptGSGKTTlL~~l~g~~~~~~~~~i~t~ed~~ 162 (356)
T 3jvv_A 128 VTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPI 162 (356)
T ss_dssp EECSTTSCHHHHHHHHHHHHHHHCCCEEEEEESSC
T ss_pred EECCCCCCHHHHHHHHHhcccCCCCcEEEEccCcH
Confidence 46999999999999999999887 57765544443
No 246
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=95.21 E-value=0.0016 Score=54.89 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=27.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
..|++|+|||||++.|++...+.+|.+.+.+.+
T Consensus 28 i~G~~GsGKTtl~~~l~~~~~~~~~~v~~~~~~ 60 (235)
T 2w0m_A 28 LTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTE 60 (235)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHTCCEEEEESS
T ss_pred EEcCCCCCHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 379999999999999998877777887776543
No 247
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=95.21 E-value=0.001 Score=58.95 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=28.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~ 183 (277)
..|++|+|||||+++|++... .|.+.+++.++.
T Consensus 78 l~Gp~GtGKTtl~~~i~~~~~--~~~i~~~~~~~~ 110 (278)
T 1iy2_A 78 LVGPPGVGKTHLARAVAGEAR--VPFITASGSDFV 110 (278)
T ss_dssp EECCTTSSHHHHHHHHHHHTT--CCEEEEEHHHHH
T ss_pred EECCCcChHHHHHHHHHHHcC--CCEEEecHHHHH
Confidence 379999999999999999875 688999887653
No 248
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=95.20 E-value=0.0045 Score=52.16 Aligned_cols=38 Identities=18% Similarity=0.147 Sum_probs=30.8
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS 186 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~ 186 (277)
..|.+||||||+++.|.+..++.+|.+.+.+.+.....
T Consensus 27 i~G~~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~~~ 64 (201)
T 1rz3_A 27 IDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVE 64 (201)
T ss_dssp EEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGCCC
T ss_pred EECCCCCCHHHHHHHHHHHHhhcCCeEEEeccCcccCC
Confidence 37999999999999999998877888887765554433
No 249
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=95.16 E-value=0.0048 Score=53.20 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=35.0
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccC------CcHHH----HhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT------VSQAS----LRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~------~~~~~----~~~~i~~vpqd~ 201 (277)
..|.+||||||+++.|.|. .|.|.+.+++... ..... ..+.+++++|+.
T Consensus 25 i~G~~GsGKSTl~~~L~~~----~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 83 (230)
T 2vp4_A 25 IEGNIGSGKTTYLNHFEKY----KNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSY 83 (230)
T ss_dssp EECSTTSCHHHHHHTTGGG----TTTEEEECCTHHHHTCBTTBCHHHHHHHSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhc----cCCeEEEecCHHHhhcccCCChHHHHHhChHhhhhhhHHH
Confidence 4799999999999999997 6889888876532 11111 134577888864
No 250
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=95.03 E-value=0.0051 Score=52.81 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=28.4
Q ss_pred hcCCCCCchhHHHHHHhcccc-------------CceeEEEECCEeccCCcHHH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD-------------VESGDIFIDNQNIKTVSQAS 189 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~-------------~~~G~i~~~g~~~~~~~~~~ 189 (277)
.+|++|+|||||++.|.+..+ |..|+ ++|.+....+...
T Consensus 24 l~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE--~~G~~y~fvs~~~ 75 (197)
T 3ney_A 24 LIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSE--EDGKEYHFISTEE 75 (197)
T ss_dssp EECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTC--CTTSSCEECCHHH
T ss_pred EECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCe--eccccceeccHHH
Confidence 379999999999999998765 44455 5676665545433
No 251
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=94.98 E-value=0.014 Score=54.03 Aligned_cols=34 Identities=32% Similarity=0.537 Sum_probs=28.5
Q ss_pred hcCCCCCchhHHHHHHhccc--cCce----eE-EEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY--DVES----GD-IFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~--~~~~----G~-i~~~g~~~ 182 (277)
..|++|||||||++.+++.. +++. |. ++++++..
T Consensus 136 I~G~~GsGKTTL~~~l~~~~~~~~~~Gg~~G~vi~i~~e~~ 176 (349)
T 1pzn_A 136 VFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENT 176 (349)
T ss_dssp EEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSC
T ss_pred EECCCCCCHHHHHHHHHHHhccchhcCCCCCeEEEEeCCCC
Confidence 47999999999999999987 5555 67 89998764
No 252
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=94.95 E-value=0.0055 Score=49.74 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.9
Q ss_pred hcCCCCCchhHHHHHHhccccCcee--EEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG--DIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G--~i~~~g~~~~ 183 (277)
..|++|+|||+|++++++...+ .| .+++++.++.
T Consensus 41 l~G~~G~GKTtL~~~i~~~~~~-~g~~~~~~~~~~~~ 76 (149)
T 2kjq_A 41 VWGEEGAGKSHLLQAWVAQALE-AGKNAAYIDAASMP 76 (149)
T ss_dssp EESSSTTTTCHHHHHHHHHHHT-TTCCEEEEETTTSC
T ss_pred EECCCCCCHHHHHHHHHHHHHh-cCCcEEEEcHHHhh
Confidence 4799999999999999998876 47 7788776543
No 253
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=94.89 E-value=0.076 Score=47.82 Aligned_cols=55 Identities=15% Similarity=0.201 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHhccCCCEEEEecC-CCCCCHHHHHHHHHHHHHHhcCceEEEEe
Q psy18009 63 SGGEKQRVAIARTLLKAPQIVLLDEA-TSALDTKTERNIQSALNRVCASRTTIIVA 117 (277)
Q Consensus 63 SgGqrQrv~IAral~~~p~ilILDEP-Ta~LD~~~~~~l~~~l~~l~~~~tiIiIs 117 (277)
...+.++.+|+++...+++++|+||| +.++|......+.++.+.+....+++++.
T Consensus 164 ~p~~l~~~~l~~~~~~~~D~viiDtpp~~~~d~~~~~~l~~~~~~~~~~~~~lv~~ 219 (295)
T 1ls1_A 164 SPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLD 219 (295)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCccccHHHHHHHHHHhhhcCCCEEEEEEe
Confidence 44566788999988899999999999 99999988888888887775555554444
No 254
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=94.82 E-value=0.0081 Score=49.18 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=21.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGD 174 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~ 174 (277)
.+|+||||||||+++|.++..+..|.
T Consensus 31 i~G~NGsGKStll~ai~~~l~~~~~~ 56 (182)
T 3kta_A 31 IVGANGSGKSNIGDAILFVLGGLSAK 56 (182)
T ss_dssp EEECTTSSHHHHHHHHHHHTTCCCTG
T ss_pred EECCCCCCHHHHHHHHHHHHcCCccc
Confidence 47999999999999999887665443
No 255
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=94.81 E-value=0.0079 Score=49.75 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=22.4
Q ss_pred hcCCCCCchhHHHHHHhccccC-ceeEEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV-ESGDIF 176 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~-~~G~i~ 176 (277)
.+|++|||||||++.|.+..++ ..|.|.
T Consensus 10 i~GpsGsGKSTL~~~L~~~~~~~~~~~i~ 38 (180)
T 1kgd_A 10 LLGAHGVGRRHIKNTLITKHPDRFAYPIP 38 (180)
T ss_dssp EECCTTSSHHHHHHHHHHHCTTTEECCCC
T ss_pred EECCCCCCHHHHHHHHHhhCCccEEEeee
Confidence 4799999999999999998763 445543
No 256
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=94.73 E-value=0.0072 Score=49.19 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=25.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~ 183 (277)
..|++||||||+++.|.+.. |.+++++..+.
T Consensus 13 l~G~~GsGKSTl~~~l~~~~----g~~~i~~d~~~ 43 (175)
T 1knq_A 13 LMGVSGSGKSAVASEVAHQL----HAAFLDGDFLH 43 (175)
T ss_dssp EECSTTSCHHHHHHHHHHHH----TCEEEEGGGGC
T ss_pred EEcCCCCCHHHHHHHHHHhh----CcEEEeCcccc
Confidence 47999999999999999864 77888876553
No 257
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=94.69 E-value=0.016 Score=48.57 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=18.6
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|.+||||||+++.|.+..+
T Consensus 26 i~G~~GsGKSTl~~~L~~~~~ 46 (207)
T 2qt1_A 26 ISGVTNSGKTTLAKNLQKHLP 46 (207)
T ss_dssp EEESTTSSHHHHHHHHHTTST
T ss_pred EECCCCCCHHHHHHHHHHhcC
Confidence 479999999999999998753
No 258
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=94.69 E-value=0.009 Score=53.13 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=25.8
Q ss_pred hcCCCCCchhHHHHHHhccccCcee-EEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG-DIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G-~i~~~g 179 (277)
..|++|+|||||++.|+|...+..| .+.+.+
T Consensus 40 i~G~~G~GKTTl~~~ia~~~~~~~G~~v~~~~ 71 (296)
T 1cr0_A 40 VTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71 (296)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 3799999999999999999988767 665443
No 259
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=94.62 E-value=0.00049 Score=57.72 Aligned_cols=49 Identities=12% Similarity=0.128 Sum_probs=35.4
Q ss_pred ccCHHHHHHHHHHHHhccCCCEE-------EEecCC---CCCCHHHHHHHHHHHHHHhc
Q psy18009 61 LLSGGEKQRVAIARTLLKAPQIV-------LLDEAT---SALDTKTERNIQSALNRVCA 109 (277)
Q Consensus 61 ~LSgGqrQrv~IAral~~~p~il-------ILDEPT---a~LD~~~~~~l~~~l~~l~~ 109 (277)
.|||||+||++||||++.+|++. +=|.|. -.+|..+.+.+.+++.+...
T Consensus 103 glSgGq~qri~lARall~~p~i~~~~~~a~~~~~~~~~~~~f~~~~~~~~a~~i~~~~~ 161 (171)
T 2f1r_A 103 GFSKAGKDRIVVVKKPEEVEHFRQGRILAVVCDERVDGHKWFRRDEVERIAEFILSLLR 161 (171)
T ss_dssp SCGGGCCCEEEECSSGGGGGGGCSSCEEEEECSSCCSSSCEECTTCHHHHHHHHHHHHT
T ss_pred CcCCCCCcEEEEEecccCCCccCccceEEEEecCCcccCcccCcccHHHHHHHHHHHHh
Confidence 39999999999999999998763 224443 23455667788888765543
No 260
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=94.39 E-value=0.0082 Score=57.21 Aligned_cols=49 Identities=24% Similarity=0.270 Sum_probs=28.2
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..+|.||+|||||+++|+|...+..| .+|..+... .......++|++|+
T Consensus 35 ~lvG~sGaGKSTLln~L~g~~~~~~~---~~~~~~~~~-~t~~~~~i~~v~q~ 83 (418)
T 2qag_C 35 MVVGESGLGKSTLINSLFLTDLYSPE---YPGPSHRIK-KTVQVEQSKVLIKE 83 (418)
T ss_dssp EEECCTTSSHHHHHHHHTTCCCCCCC---CCSCC------CCEEEEEECC---
T ss_pred EEECCCCCcHHHHHHHHhCCCCCCCC---CCCcccCCc-cceeeeeEEEEEec
Confidence 45799999999999999999875444 123222110 11112457888875
No 261
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=94.37 E-value=0.014 Score=53.52 Aligned_cols=52 Identities=17% Similarity=0.318 Sum_probs=39.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH----HHH-----hcceEEE-cCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ----ASL-----RQAIGVV-PQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~----~~~-----~~~i~~v-pqd 200 (277)
.+|++|+||||++..|++...+.+|++.+.+.+...... ... +.++.++ +|.
T Consensus 110 ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r~~a~~ql~~~~~~~~~~~l~vip~~~ 171 (320)
T 1zu4_A 110 LVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANK 171 (320)
T ss_dssp EESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSCHHHHHHHHHHHTTTSCTTEEEECCSS
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHhccccCCceEEeCCC
Confidence 368999999999999999998888999988776643221 122 5679999 554
No 262
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=94.27 E-value=0.011 Score=52.40 Aligned_cols=28 Identities=21% Similarity=0.254 Sum_probs=9.5
Q ss_pred ceEEEeee-eeeeCchHHhhcccCccccc
Q psy18009 28 GAVEFRNV-SFSYTPERAILKNISFTVPA 55 (277)
Q Consensus 28 g~i~~~nv-sf~Y~~~~~vL~~l~l~i~~ 55 (277)
.+++++|+ +|+|.....+|+++++++.+
T Consensus 16 ~~l~~~~~~~~~~~~~~~~l~~~~~~i~~ 44 (250)
T 3nwj_A 16 ALLETGSLLHSPFDEEQQILKKKAEEVKP 44 (250)
T ss_dssp ----------------CHHHHHHHHTTHH
T ss_pred CceEEcceeeEEecCcchhhhhhhhhhhh
Confidence 36899999 99994445688888887543
No 263
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=94.16 E-value=0.01 Score=58.46 Aligned_cols=33 Identities=36% Similarity=0.458 Sum_probs=28.4
Q ss_pred cCCCCCchhHHHHHHhccccCcee-EE-EECCEec
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESG-DI-FIDNQNI 182 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G-~i-~~~g~~~ 182 (277)
+|.||||||||+++|.|...+.+| .+ +++|..+
T Consensus 375 iG~sGSGKSTLar~La~~L~~~~G~~i~~lDgD~~ 409 (552)
T 3cr8_A 375 TGLSGAGKSTLARALAARLMEMGGRCVTLLDGDIV 409 (552)
T ss_dssp EESSCHHHHHHHHHHHHHHHTTCSSCEEEESSHHH
T ss_pred ECCCCChHHHHHHHHHHhhcccCCceEEEECCcHH
Confidence 589999999999999999988876 67 4888655
No 264
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=94.09 E-value=0.0072 Score=50.21 Aligned_cols=29 Identities=28% Similarity=0.318 Sum_probs=18.8
Q ss_pred hcCCCCCchhHHHHHHhccc-----cCceeEEEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY-----DVESGDIFI 177 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~-----~~~~G~i~~ 177 (277)
.+|.+|+|||||+++|.|.. .+..|.+.+
T Consensus 31 lvG~~g~GKSTLl~~l~g~~~~~~~~~~~G~~~~ 64 (210)
T 1pui_A 31 FAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQL 64 (210)
T ss_dssp EEECTTSSHHHHHTTTCCC-------------CC
T ss_pred EECCCCCCHHHHHHHHhCCCccccccCCCcccee
Confidence 47999999999999999988 666676543
No 265
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=94.06 E-value=0.02 Score=54.21 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=29.8
Q ss_pred ehhcCCCCCchhHHHHHHhcccc------------CceeEEEECCEecc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFYD------------VESGDIFIDNQNIK 183 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~~------------~~~G~i~~~g~~~~ 183 (277)
+..+|.+|+|||||+++|.|... +..|.+.++|+.+.
T Consensus 183 vaivG~~gvGKSTLln~l~g~~~~~v~~~~gtT~d~~~~~i~~~g~~~~ 231 (439)
T 1mky_A 183 VAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV 231 (439)
T ss_dssp EEEECSTTSSHHHHHHHHHTSTTEEECCCC------CCEEEEETTEEEE
T ss_pred EEEECCCCCCHHHHHHHHhCCcccccCCCCCCcCCceEEEEEECCEEEE
Confidence 34579999999999999999853 55689999998664
No 266
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=94.03 E-value=0.15 Score=49.37 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=51.9
Q ss_pred CCeeeccCHHHHHHHHHHHH--hcc---------------CCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEec
Q psy18009 56 GKTLALLSGGEKQRVAIART--LLK---------------APQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAH 118 (277)
Q Consensus 56 ~~~v~~LSgGqrQrv~IAra--l~~---------------~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH 118 (277)
.+..+.+||||+|-.-+|.+ ++. .-++++|||+ +-+|.+..+..+++++++ +--+|+++=
T Consensus 374 s~~~g~~SGGE~qp~Yv~i~As~~~~y~~~~~~~~~~~~~~~rlvvlDEA-~kmD~~~~~~~~~l~~~l--glQliiatP 450 (483)
T 3euj_A 374 RAESSALSTGEAIGTGMSILLMVVQSWEEESRRMRAKDILPCRLLFLDQA-ARLDAMSINTLFELCERL--DMQLLIAAP 450 (483)
T ss_dssp ECCGGGSCHHHHHHHHHHHHHHHHHHHHHHTSSSSCSSCCCCCEEEESSG-GGSCHHHHHHHHHHHHHT--TCEEEEEES
T ss_pred ecccCCCCCccccHHHHHHHHHHHHHhcccccccccCCCCceeEEEEecc-ccCCHHHHHHHHHHHHHc--CCEEEEECc
Confidence 33456799999996444433 222 2368999999 999999999999999977 335566665
Q ss_pred Ccchhc-cCceEEEee
Q psy18009 119 RLSTII-HADEILVMH 133 (277)
Q Consensus 119 ~l~ev~-~~Drv~vL~ 133 (277)
. .+. .+|.++.+-
T Consensus 451 ~--~i~p~v~~~~~~~ 464 (483)
T 3euj_A 451 E--NISPERGTTYKLV 464 (483)
T ss_dssp S--SCCCSSSEEEECC
T ss_pred c--hhhhccCceEEEE
Confidence 5 443 478877763
No 267
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=94.02 E-value=0.015 Score=54.98 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=26.1
Q ss_pred hcCCCCCchhHHHHH--HhccccCce-----eEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRL--LFRFYDVES-----GDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~--l~Gl~~~~~-----G~i~~~g~~~ 182 (277)
..|++|+|||||++. +.++.++.. +.++++++..
T Consensus 183 I~G~sGsGKTTLl~~la~~~~~p~~~Gg~~~~viyid~E~~ 223 (400)
T 3lda_A 183 LFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGT 223 (400)
T ss_dssp EEESTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSC
T ss_pred EEcCCCCChHHHHHHHHHHhccCcccCCCCCcEEEEeCCCc
Confidence 479999999999994 457766543 4889988763
No 268
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=93.98 E-value=0.012 Score=48.32 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=21.7
Q ss_pred hcCCCCCchhHHHHHHhccccCcee
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG 173 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G 173 (277)
..|++|+|||||++++++...+..|
T Consensus 43 l~G~~G~GKTtL~~~i~~~~~~~~g 67 (180)
T 3ec2_A 43 FVGSPGVGKTHLAVATLKAIYEKKG 67 (180)
T ss_dssp ECCSSSSSHHHHHHHHHHHHHHHSC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHcC
Confidence 3799999999999999998876555
No 269
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=93.96 E-value=0.029 Score=52.99 Aligned_cols=31 Identities=29% Similarity=0.447 Sum_probs=27.4
Q ss_pred hcCCCCCchhHHHHHHhc------------cccCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFR------------FYDVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G------------l~~~~~G~i~~~g 179 (277)
.+|++|+|||||+++|.| ...|..|.+.+.|
T Consensus 25 iVG~pnaGKSTL~n~Ltg~~~a~~~~~p~tTi~p~~G~v~v~~ 67 (392)
T 1ni3_A 25 IVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPD 67 (392)
T ss_dssp EEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCTTEEEEEECC
T ss_pred EECCCCCCHHHHHHHHHCCCcccccCCCceeecceeeeeeeCC
Confidence 479999999999999999 4568889999987
No 270
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=93.95 E-value=0.047 Score=47.10 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=37.0
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc
Q psy18009 73 ARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH 125 (277)
Q Consensus 73 Aral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~ 125 (277)
+..++..++++||| ||+.....+.+.+. ++.++++++|+++++..
T Consensus 101 v~~~l~~G~illLD-----LD~~~~~~i~~~l~---~~~tI~i~th~~~~l~~ 145 (219)
T 1s96_A 101 IEQVLATGVDVFLD-----IDWQGAQQIRQKMP---HARSIFILPPSKIELDR 145 (219)
T ss_dssp HHHHHTTTCEEEEE-----CCHHHHHHHHHHCT---TCEEEEEECSSHHHHHH
T ss_pred HHHHHhcCCeEEEE-----ECHHHHHHHHHHcc---CCEEEEEECCCHHHHHH
Confidence 34455678999999 99999999998876 45688889999998865
No 271
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=93.89 E-value=0.018 Score=56.32 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=28.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
..|++|+|||||+++|++...+..|.+.+.|...........+..+++.++.
T Consensus 113 l~Gp~GtGKTtlar~ia~~l~~~~~~i~~~~~~~~~~~~g~~~~~ig~~~~~ 164 (543)
T 3m6a_A 113 LAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGR 164 (543)
T ss_dssp EESSSSSSHHHHHHHHHHHHTCEEEEECCCC--------------------C
T ss_pred EECCCCCCHHHHHHHHHHhcCCCeEEEEecccchhhhhhhHHHHHhccCchH
Confidence 4799999999999999999988889888777432111111223446666654
No 272
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=93.87 E-value=0.029 Score=50.68 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=47.0
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHh---cCceEEEE--ecCcchhcc-CceEEEeeCcEEEE
Q psy18009 67 KQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVC---ASRTTIIV--AHRLSTIIH-ADEILVMHAGEIVE 139 (277)
Q Consensus 67 rQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~---~~~tiIiI--sH~l~ev~~-~Drv~vL~dG~iv~ 139 (277)
..+.+|++ +.+++++|+| |+++|+.....+.++.+-+. ...+++++ +|..+++.. ++++..+..+.++.
T Consensus 172 ~l~~al~~--~~~~dlvIiD--T~G~~~~~~~~~~el~~~l~~~~~~~~~lVl~at~~~~~~~~~~~~~~~l~~~giVl 246 (296)
T 2px0_A 172 EFQQAKEL--FSEYDHVFVD--TAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQYIF 246 (296)
T ss_dssp HHHHHHHH--GGGSSEEEEE--CCCCCTTSHHHHHHHHHHSCCCTTEEEEEEEETTBCHHHHHHHTTTTSSSCCCEEEE
T ss_pred HHHHHHHH--hcCCCEEEEe--CCCCChhhHHHHHHHHHHHhhcCCCeEEEEEECCCCHHHHHHHHHHHhcCCCCEEEE
Confidence 34556664 3899999999 99999877665555544443 22344555 899888876 88776666666654
No 273
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=93.71 E-value=0.011 Score=57.27 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=37.3
Q ss_pred hcCCCCCchhHHHHHHhcc----------------------c----------------cCceeEEEECCEeccCCcHH-H
Q psy18009 149 QVGQSGAGKSTIIRLLFRF----------------------Y----------------DVESGDIFIDNQNIKTVSQA-S 189 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl----------------------~----------------~~~~G~i~~~g~~~~~~~~~-~ 189 (277)
.+|.||||||+|+++|..+ . ....+.++++|++++..... .
T Consensus 65 i~G~NGaGKS~lleAl~~llg~r~~~~~i~~g~~~a~v~~~f~~~~~~~~~~i~r~~~~~g~~~~~ing~~v~~~~l~~~ 144 (517)
T 4ad8_A 65 FTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWGDGDESEADSASRRLSSAGRGAARLSGEVVSVRELQEW 144 (517)
T ss_dssp EEESHHHHHHHHTHHHHHHTCSCCCGGGBCTTCSEEEEEEEC--------CEEEEEEETTSCCEEESSSSBCCHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHhcCCcHHHHhcCCCCcEEEEEEEEecCCCCeEEEEEEEecCCCcEEEECCEECCHHHHHHH
Confidence 4799999999999999544 2 12246788888887654433 3
Q ss_pred HhcceEEEcCC
Q psy18009 190 LRQAIGVVPQD 200 (277)
Q Consensus 190 ~~~~i~~vpqd 200 (277)
....+.+++|+
T Consensus 145 ~~~li~i~~q~ 155 (517)
T 4ad8_A 145 AQGRLTIHWQH 155 (517)
T ss_dssp HTTTEEEESGG
T ss_pred hhhheEEeCCc
Confidence 45568889986
No 274
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=93.55 E-value=0.024 Score=45.72 Aligned_cols=22 Identities=50% Similarity=0.566 Sum_probs=19.0
Q ss_pred hcCCCCCchhHHHHHHhccccC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV 170 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~ 170 (277)
..|++||||||+++.|.+...+
T Consensus 9 l~G~~GsGKSTl~~~La~~l~~ 30 (173)
T 1kag_A 9 LVGPMGAGKSTIGRQLAQQLNM 30 (173)
T ss_dssp EECCTTSCHHHHHHHHHHHTTC
T ss_pred EECCCCCCHHHHHHHHHHHhCC
Confidence 4799999999999999987643
No 275
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=93.49 E-value=0.034 Score=54.94 Aligned_cols=48 Identities=23% Similarity=0.318 Sum_probs=37.1
Q ss_pred hcCCCCCchhHHHHHHhccccCce-eEEEECCEeccCCcHHHHhcceEEEcCCc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVES-GDIFIDNQNIKTVSQASLRQAIGVVPQDT 201 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~-G~i~~~g~~~~~~~~~~~~~~i~~vpqd~ 201 (277)
..|++|+|||||+++|.++.++.. |.+.+.+.+.... ...++|+|+..
T Consensus 65 l~Gp~GtGKTtlar~ia~~l~~~~~~~~~~~~~~~~~~-----~p~i~~~p~g~ 113 (604)
T 3k1j_A 65 LIGEPGTGKSMLGQAMAELLPTETLEDILVFPNPEDEN-----MPRIKTVPACQ 113 (604)
T ss_dssp EECCTTSSHHHHHHHHHHTSCCSSCEEEEEECCTTCTT-----SCEEEEEETTH
T ss_pred EEeCCCCCHHHHHHHHhccCCcccCCeEEEeCCccccc-----CCcEEEEecch
Confidence 379999999999999999998876 8888877655422 23478887753
No 276
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=93.37 E-value=0.019 Score=52.36 Aligned_cols=52 Identities=19% Similarity=0.283 Sum_probs=38.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcH-H-----HHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ-A-----SLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~-~-----~~~~~i~~vpqd 200 (277)
.+|++|+||||++..|++...+.+|++.+.+.+...... . ..+.++.++++.
T Consensus 109 ivG~~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r~~a~eqL~~~~~~~gl~~~~~~ 166 (306)
T 1vma_A 109 VVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHS 166 (306)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCS
T ss_pred EEcCCCChHHHHHHHHHHHHHhcCCEEEEEccccccHHHHHHHHHHHHHcCCcEEecC
Confidence 479999999999999999998888899998876643221 1 113467888774
No 277
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=93.36 E-value=0.03 Score=47.31 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=20.0
Q ss_pred hcCCCCCchhHHHHHHhccccC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV 170 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~ 170 (277)
..|++|||||||++.|.+..++
T Consensus 13 l~GpsGsGKsTl~~~L~~~~~~ 34 (208)
T 3tau_A 13 LSGPSGVGKGTVREAVFKDPET 34 (208)
T ss_dssp EECCTTSCHHHHHHHHHHSTTC
T ss_pred EECcCCCCHHHHHHHHHhhCCC
Confidence 3799999999999999998875
No 278
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=93.35 E-value=0.029 Score=51.59 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=21.8
Q ss_pred hcCCCCCchhHHHHHHhccccC--ceeEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV--ESGDI 175 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~--~~G~i 175 (277)
..|++|||||||++.|.++... ..|.+
T Consensus 97 I~GpsGSGKSTl~~~L~~ll~~~~~~~~v 125 (321)
T 3tqc_A 97 IAGSVAVGKSTTSRVLKALLSRWPDHPNV 125 (321)
T ss_dssp EECCTTSSHHHHHHHHHHHHTTSTTCCCE
T ss_pred EECCCCCCHHHHHHHHHHHhcccCCCCeE
Confidence 4799999999999999998763 44443
No 279
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=93.07 E-value=0.16 Score=49.15 Aligned_cols=60 Identities=20% Similarity=0.294 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhccCCCEEEEecCCC----------CCCHHHHHHHHHHHHHHh----cCceE-EEEecCcchh
Q psy18009 64 GGEKQRVAIARTLLKAPQIVLLDEATS----------ALDTKTERNIQSALNRVC----ASRTT-IIVAHRLSTI 123 (277)
Q Consensus 64 gGqrQrv~IAral~~~p~ilILDEPTa----------~LD~~~~~~l~~~l~~l~----~~~ti-IiIsH~l~ev 123 (277)
+++++|-.+++|....|.+|++||+.+ +.|+...+.+.+++..+. ..+.+ |.+||+.+.+
T Consensus 93 ~~~~~r~lf~~A~~~~p~ILfIDEid~l~~~r~~~~~g~~~~~~~~l~~LL~~ld~~~~~~~viVIaaTn~~~~L 167 (476)
T 2ce7_A 93 GAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDIL 167 (476)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEETGGGTCCC---------CHHHHHHHHHHHHHHHSCGGGTEEEEEEESCGGGS
T ss_pred cHHHHHHHHHHHHhcCCCEEEEechhhhhhhcccccCcCcHHHHHHHHHHHHHHhccCCCCCEEEEEecCChhhh
Confidence 677888889999999999999999944 556665566666666553 23444 4488987543
No 280
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=92.89 E-value=0.026 Score=47.65 Aligned_cols=33 Identities=30% Similarity=0.280 Sum_probs=27.8
Q ss_pred cCCCCCchhHHHHHHhccccCcee--EEEECCEec
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESG--DIFIDNQNI 182 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G--~i~~~g~~~ 182 (277)
.|.+||||||+++.|.+...+..| .++++|..+
T Consensus 31 ~G~~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d~~ 65 (211)
T 1m7g_A 31 TGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 65 (211)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhccccCCcEEEECChHH
Confidence 699999999999999998876677 788886443
No 281
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=92.75 E-value=0.024 Score=52.38 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=27.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
.+|.+|||||||++.|.|...+.+|+|.+-+.+
T Consensus 79 lvG~pgaGKSTLln~L~~~~~~~~~~v~V~~~d 111 (349)
T 2www_A 79 LSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVD 111 (349)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEcCCCCCHHHHHHHHHHHhhhcCCeEEEEeec
Confidence 489999999999999999887777877766543
No 282
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=92.68 E-value=0.0011 Score=56.05 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=42.3
Q ss_pred HHH-HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcCceEEEEecCcchhccCceEEEeeC
Q psy18009 72 IAR-TLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHA 134 (277)
Q Consensus 72 IAr-al~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~~Drv~vL~d 134 (277)
+++ +++.+|.+++|||+|+++|..+.+.+.+.|..+..+ +.++| .. ..+|+|+++++
T Consensus 116 ~~~~~~l~~p~~~ilde~~~~~d~~~e~~i~~~l~~~~~~---~~~a~--~~-~~~D~iivnd~ 173 (198)
T 1lvg_A 116 CPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTD---MESSK--EP-GLFDLVIINDD 173 (198)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTCSCHHHHHHHHHHHHHH---TTGGG--ST-TTCSEEEECSS
T ss_pred CcEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHH---HHHhh--cc-CCceEEEECCC
Confidence 455 677788888889999999998888888888776543 23456 22 45999988764
No 283
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=92.68 E-value=0.082 Score=49.16 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=28.8
Q ss_pred hhcCCCCCchhHHHHHHhcccc-----------CceeEEEECCEecc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYD-----------VESGDIFIDNQNIK 183 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~-----------~~~G~i~~~g~~~~ 183 (277)
..+|.+|+|||||+++|.|... +..|.+.++|.++.
T Consensus 183 ~lvG~~naGKSTLln~L~~~~~~~~~~~~~T~d~~~~~i~~~g~~v~ 229 (364)
T 2qtf_A 183 GIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIM 229 (364)
T ss_dssp EEECBTTSSHHHHHHHHHCC-----------CCSCEEEEEETTEEEE
T ss_pred EEECCCCCCHHHHHHHHHCCCccccCCcccccCCEEEEEEECCEEEE
Confidence 3579999999999999999865 46689999987664
No 284
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=92.46 E-value=0.02 Score=57.56 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=39.0
Q ss_pred hcCCCCCchhHHHHHHhccccC--ceeEEEECCEeccCCcHHHHhcceEEEcCC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV--ESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd 200 (277)
.+|.+|+|||||++.|.+...+ ..|+| .+|..+....+...+++|.+.++.
T Consensus 14 IiG~~gaGKTTLl~~L~~~~~~~~~~G~V-~~g~~~~d~~~~e~~~giti~~~~ 66 (665)
T 2dy1_A 14 LVGHAGSGKTTLTEALLYKTGAKERRGRV-EEGTTTTDYTPEAKLHRTTVRTGV 66 (665)
T ss_dssp EEESTTSSHHHHHHHHHHHTTSSSSCCCG-GGTCCSSCCSHHHHHTTSCCSCEE
T ss_pred EECCCCChHHHHHHHHHHhcCCCCcccee-cCCcccccCCHHHHhcCCeEEecc
Confidence 4799999999999999976554 56777 677777666666677777776664
No 285
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=92.46 E-value=0.072 Score=50.90 Aligned_cols=50 Identities=6% Similarity=0.088 Sum_probs=42.7
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHH-HhcCc-eEEEEecC
Q psy18009 70 VAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNR-VCASR-TTIIVAHR 119 (277)
Q Consensus 70 v~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~-l~~~~-tiIiIsH~ 119 (277)
++|+++|..+++++++|+|+..|++.+...+++.+++ +...+ .++.+|.+
T Consensus 167 ieilk~L~~~~~vI~Vi~KtD~Lt~~E~~~l~~~I~~~L~~~gi~I~~is~~ 218 (427)
T 2qag_B 167 LVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTD 218 (427)
T ss_dssp HHHHHHTCSCSEEEEEESCGGGSCHHHHHHHHHHHHHHHBTTBCCCCCCC--
T ss_pred HHHHHHHhhCCCEEEEEcchhccchHHHHHHHHHHHHHHHHcCCcEEecCCC
Confidence 8999999999999999999999999999999999997 77665 55557754
No 286
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=92.46 E-value=0.3 Score=44.34 Aligned_cols=40 Identities=25% Similarity=0.405 Sum_probs=32.2
Q ss_pred hcccCcccccCCeeeccCHHHHHHH---HHHHHhccCCCEEEEecCCC
Q psy18009 46 LKNISFTVPAGKTLALLSGGEKQRV---AIARTLLKAPQIVLLDEATS 90 (277)
Q Consensus 46 L~~l~l~i~~~~~v~~LSgGqrQrv---~IAral~~~p~ilILDEPTa 90 (277)
++.+++.+ +..+|+|+.|++ +|++++..+++++|+|+|..
T Consensus 155 ~~~~gl~~-----~~~~s~~~~~~v~~~al~~a~~~~~dvvIiDtpg~ 197 (306)
T 1vma_A 155 GERVGATV-----ISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGR 197 (306)
T ss_dssp HHHHTCEE-----ECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCC
T ss_pred HHHcCCcE-----EecCCccCHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 44455543 345789999999 99999999999999999985
No 287
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=92.34 E-value=0.00029 Score=66.79 Aligned_cols=63 Identities=8% Similarity=0.180 Sum_probs=53.6
Q ss_pred CC--CEEEEecCCCCCCHHHHHHHHHHHHHH-hcCceEEEEecCcchhcc-CceEE-EeeCc-EEEEecC
Q psy18009 79 AP--QIVLLDEATSALDTKTERNIQSALNRV-CASRTTIIVAHRLSTIIH-ADEIL-VMHAG-EIVERGS 142 (277)
Q Consensus 79 ~p--~ilILDEPTa~LD~~~~~~l~~~l~~l-~~~~tiIiIsH~l~ev~~-~Drv~-vL~dG-~iv~~g~ 142 (277)
+| +++++|||++.+|+...+..++.++.+ ...+++| ++|.+.++.. ||++. +|.+| +++..++
T Consensus 139 dP~~di~ildeel~~~D~~~~~k~~~~l~~~~~~~g~ti-~sh~~~~~~~l~~~i~~~L~~G~~~~~~~~ 207 (392)
T 1ni3_A 139 DPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANTL-EMKAKKEEQAIIEKVYQYLTETKQPIRKGD 207 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCSS-SHHHHHHHHHHHHHHHHHHHTTCSCGGGSC
T ss_pred CcchhhhhchhhhHHHHHHHHHHHHHHHHHHHHhcCCcc-ccccHHHHHHHHHHHHHHhccCCceeecCC
Confidence 78 999999999999999999999999988 6655433 3999999987 99999 99999 8876554
No 288
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=92.13 E-value=0.27 Score=45.08 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=48.9
Q ss_pred eeeccCHHHHHHHHHHHHhccCCCEEEEe-cCCCCCCHHHHHHHHHHHHHHhcCceEEEEe--cCcc
Q psy18009 58 TLALLSGGEKQRVAIARTLLKAPQIVLLD-EATSALDTKTERNIQSALNRVCASRTTIIVA--HRLS 121 (277)
Q Consensus 58 ~v~~LSgGqrQrv~IAral~~~p~ilILD-EPTa~LD~~~~~~l~~~l~~l~~~~tiIiIs--H~l~ 121 (277)
....+|++++|.+. +.+...++-++++| +|++++|..+...+++.+..+..+..+|++. ||+.
T Consensus 228 ~~~~~~~~~~~~~~-~~~~~ad~illV~D~s~~~~~~~~~~~~~~~~i~~~~~~~piilV~NK~Dl~ 293 (357)
T 2e87_A 228 PISERNEIEKQAIL-ALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPFLVVINKIDVA 293 (357)
T ss_dssp CSTTSCHHHHHHHH-GGGGTCSEEEEEECTTCTTSSCHHHHHHHHHHHHHHTTTSCEEEEECCTTTC
T ss_pred chhhhhHHHHHHHH-HHHhcCCEEEEEEeCCccccCCHHHHHHHHHHHHHhcCCCCEEEEEECcccC
Confidence 44568999998876 55555677889999 9999999999888888887765555677777 6664
No 289
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=92.05 E-value=0.11 Score=41.80 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=26.3
Q ss_pred ehhcCCCCCchhHHHHHHhccc-----------cCceeEEEECCEec
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY-----------DVESGDIFIDNQNI 182 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~-----------~~~~G~i~~~g~~~ 182 (277)
+..+|.+|+|||||++.|.|.. .+..+.+.++|..+
T Consensus 10 i~lvG~~gvGKStL~~~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 56 (188)
T 2wjg_A 10 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKF 56 (188)
T ss_dssp EEEECSTTSSHHHHHHHHHTTCEEEEECTTSCCEEEEEEEEETTEEE
T ss_pred EEEECCCCCCHHHHHHHHhCCCccccCCCCeeccceEEEEEeCCcEE
Confidence 3457999999999999999842 23456677766544
No 290
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=91.96 E-value=0.036 Score=45.21 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=25.2
Q ss_pred hcCCCCCchhHHHHHHhccccCcee--EEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG--DIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G--~i~~~g~~~ 182 (277)
..|.+||||||+++.|.+..++ .| .+.+++..+
T Consensus 10 l~G~~GsGKST~~~~L~~~l~~-~g~~~i~~d~~~~ 44 (179)
T 2pez_A 10 LTGLSGAGKTTVSMALEEYLVC-HGIPCYTLDGDNI 44 (179)
T ss_dssp EECCTTSSHHHHHHHHHHHHHH-TTCCEEEEEHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHhh-CCCcEEEECChHH
Confidence 4799999999999999987654 35 566666444
No 291
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=91.79 E-value=0.15 Score=41.18 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=26.8
Q ss_pred ehhcCCCCCchhHHHHHHhccccC------------ceeEEEECCEec
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFYDV------------ESGDIFIDNQNI 182 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~~~------------~~G~i~~~g~~~ 182 (277)
+..+|.+|+|||||++.|.|...+ ..+.+.++|..+
T Consensus 7 i~ivG~~g~GKStLl~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 54 (172)
T 2gj8_A 7 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPL 54 (172)
T ss_dssp EEEEESTTSSHHHHHHHHHTSCCSCCCSSTTCCCSCEEEEEEETTEEE
T ss_pred EEEECCCCCCHHHHHHHHhCCCcceeeCCCCceeceeeEEEEECCeEE
Confidence 345799999999999999986421 246777887654
No 292
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=91.69 E-value=0.056 Score=50.90 Aligned_cols=24 Identities=29% Similarity=0.490 Sum_probs=19.9
Q ss_pred hcCCCCCchhHHHHHHhccccCce
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVES 172 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~ 172 (277)
.+|+||||||||+++|+++..+.+
T Consensus 31 i~G~nG~GKstll~ai~~~~~~~~ 54 (430)
T 1w1w_A 31 IIGPNGSGKSNMMDAISFVLGVRS 54 (430)
T ss_dssp EECSTTSSHHHHHHHHHHHTTC--
T ss_pred EECCCCCCHHHHHHHHHhhhcccc
Confidence 479999999999999999876644
No 293
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=91.69 E-value=0.11 Score=44.54 Aligned_cols=70 Identities=24% Similarity=0.236 Sum_probs=47.4
Q ss_pred HHHHHHHHHhc--cCCCEEEEecCCCC--CCHHHHHHHHHHHHHHhcCceEEEEecCcch-hcc-CceEEEeeCcE
Q psy18009 67 KQRVAIARTLL--KAPQIVLLDEATSA--LDTKTERNIQSALNRVCASRTTIIVAHRLST-IIH-ADEILVMHAGE 136 (277)
Q Consensus 67 rQrv~IAral~--~~p~ilILDEPTa~--LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~e-v~~-~Drv~vL~dG~ 136 (277)
+..+..++..+ .+.++|||||.+.+ ++.-..+.++++|.+......+|+++..... +.. ||-|+-|+.-+
T Consensus 106 ~~~l~~a~~~l~~~~yDlvILDEi~~al~~g~l~~~ev~~~l~~Rp~~~~vIlTGr~ap~~l~e~AD~VTem~~vk 181 (196)
T 1g5t_A 106 MAVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRPVK 181 (196)
T ss_dssp HHHHHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHCSEEEECCCSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCccccCCCCCHHHHHHHHHhCcCCCEEEEECCCCcHHHHHhCcceeeeccee
Confidence 44555566666 45799999999763 3444445688888765455567777776554 555 99999997643
No 294
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=91.56 E-value=0.013 Score=57.45 Aligned_cols=59 Identities=22% Similarity=0.220 Sum_probs=37.5
Q ss_pred cCHHHHHHH----------HHHHHhccCCC-EEEEecCCCCCCHHHHHHHHHHHHHHh----c-CceEEEEecCcc
Q psy18009 62 LSGGEKQRV----------AIARTLLKAPQ-IVLLDEATSALDTKTERNIQSALNRVC----A-SRTTIIVAHRLS 121 (277)
Q Consensus 62 LSgGqrQrv----------~IAral~~~p~-ilILDEPTa~LD~~~~~~l~~~l~~l~----~-~~tiIiIsH~l~ 121 (277)
+|+||+|+. ++++++...|. ++++||+++-++.. ...+.+.+.++. + +-++|++||+.+
T Consensus 269 ~s~G~~~~~~~~~pg~~~~~~a~~l~~lP~ivlvIDE~~~ll~~~-~~~~~~~l~~Lar~gRa~GI~LIlaTQrp~ 343 (512)
T 2ius_A 269 DRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTV-GKKVEELIARLAQKARAAGIHLVLATQRPS 343 (512)
T ss_dssp HHTTCCCBCTTC---------CCBCCCCCEEEEEEETHHHHHHHH-HHHHHHHHHHHHHHCGGGTEEEEEEESCCC
T ss_pred hhcCCcccccccccccchhccccccccCCcEEEEEeCHHHHHhhh-hHHHHHHHHHHHHHhhhCCcEEEEEecCCc
Confidence 566665542 35566677887 89999999988733 233444444442 2 336778999987
No 295
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=91.18 E-value=0.047 Score=57.57 Aligned_cols=22 Identities=36% Similarity=0.495 Sum_probs=18.9
Q ss_pred hhcCCCCCchhHHHHHHhccccC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDV 170 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~ 170 (277)
...|+||+|||||++.+ |+..+
T Consensus 793 ~ItGpNgsGKSTlLr~i-Gl~~~ 814 (1022)
T 2o8b_B 793 LVTGPNMGGKSTLMRQA-GLLAV 814 (1022)
T ss_dssp EEECCTTSSHHHHHHHH-HHHHH
T ss_pred EEECCCCCChHHHHHHH-HHHHH
Confidence 35799999999999999 98753
No 296
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=91.18 E-value=0.052 Score=49.01 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=26.5
Q ss_pred cCCCCCchhHHHHHHhccccCcee-EEEECCEec
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESG-DIFIDNQNI 182 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G-~i~~~g~~~ 182 (277)
+|++|+||||++..|++...+..| ++.+-+.+.
T Consensus 111 vG~~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~ 144 (296)
T 2px0_A 111 FGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDT 144 (296)
T ss_dssp EESTTSSHHHHHHHHHHHHHHTTCCCEEEEECCC
T ss_pred ECCCCCCHHHHHHHHHHHHHHhcCCEEEEEecCc
Confidence 799999999999999999887667 566554444
No 297
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=91.12 E-value=0.06 Score=44.15 Aligned_cols=31 Identities=29% Similarity=0.426 Sum_probs=24.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEE-EECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDI-FIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i-~~~g 179 (277)
..|.+||||||+++.|.+.....++.+ ++++
T Consensus 18 l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~ 49 (186)
T 2yvu_A 18 LTGLPGSGKTTIATRLADLLQKEGYRVEVLDG 49 (186)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeH
Confidence 379999999999999998776655554 4544
No 298
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=91.05 E-value=0.038 Score=53.76 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=28.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT 184 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~ 184 (277)
..|++|+|||+|+++|++... .+.+.++|.++..
T Consensus 69 L~GppGtGKTtLaraIa~~~~--~~~i~i~g~~~~~ 102 (499)
T 2dhr_A 69 LVGPPGVGKTHLARAVAGEAR--VPFITASGSDFVE 102 (499)
T ss_dssp EECSSSSSHHHHHHHHHHHTT--CCEEEEEGGGGTS
T ss_pred EECCCCCCHHHHHHHHHHHhC--CCEEEEehhHHHH
Confidence 479999999999999999764 6889999877643
No 299
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=90.75 E-value=0.23 Score=39.48 Aligned_cols=21 Identities=33% Similarity=0.360 Sum_probs=18.1
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||++.|.|..
T Consensus 7 ~lvG~~gvGKStL~~~l~~~~ 27 (165)
T 2wji_A 7 ALIGNPNVGKSTIFNALTGEN 27 (165)
T ss_dssp EEECSTTSSHHHHHHHHHCCS
T ss_pred EEECCCCCCHHHHHHHHhCCC
Confidence 347999999999999999853
No 300
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=90.75 E-value=0.088 Score=43.79 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=24.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
..|++|+|||||++.+++ ....+.++++...
T Consensus 25 i~G~~GsGKTtl~~~l~~--~~~~~v~~i~~~~ 55 (220)
T 2cvh_A 25 VYGPYASGKTTLALQTGL--LSGKKVAYVDTEG 55 (220)
T ss_dssp EECSTTSSHHHHHHHHHH--HHCSEEEEEESSC
T ss_pred EECCCCCCHHHHHHHHHH--HcCCcEEEEECCC
Confidence 479999999999999999 4444566776543
No 301
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=90.39 E-value=0.11 Score=43.19 Aligned_cols=19 Identities=37% Similarity=0.574 Sum_probs=17.1
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|.+||||||+++.|.++
T Consensus 7 l~G~~GsGKST~~~~La~l 25 (206)
T 1jjv_A 7 LTGGIGSGKTTIANLFTDL 25 (206)
T ss_dssp EECSTTSCHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHC
Confidence 4799999999999999883
No 302
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=90.03 E-value=0.12 Score=48.01 Aligned_cols=18 Identities=28% Similarity=0.621 Sum_probs=16.7
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
.+|+|||||||++++|++
T Consensus 31 i~G~nG~GKttll~ai~~ 48 (359)
T 2o5v_A 31 IYGENGAGKTNLLEAAYL 48 (359)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EECCCCCChhHHHHHHHH
Confidence 479999999999999987
No 303
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=90.02 E-value=0.12 Score=41.67 Aligned_cols=18 Identities=39% Similarity=0.842 Sum_probs=15.9
Q ss_pred hhcCCCCCchhHHHHHHh
Q psy18009 148 LQVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~ 165 (277)
...|+||||||+++++|.
T Consensus 27 ~I~G~NGsGKStil~Ai~ 44 (149)
T 1f2t_A 27 LIIGQNGSGKSSLLDAIL 44 (149)
T ss_dssp EEECCTTSSHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHH
Confidence 347999999999999985
No 304
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=89.77 E-value=0.3 Score=46.30 Aligned_cols=116 Identities=10% Similarity=0.165 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhccCCCEEEEecCCC-CCCHHHHHHHHHHHHHHhcCceEEEEecCcchhcc---CceEEEeeCcEEEEe
Q psy18009 65 GEKQRVAIARTLLKAPQIVLLDEATS-ALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIH---ADEILVMHAGEIVER 140 (277)
Q Consensus 65 GqrQrv~IAral~~~p~ilILDEPTa-~LD~~~~~~l~~~l~~l~~~~tiIiIsH~l~ev~~---~Drv~vL~dG~iv~~ 140 (277)
.+.+....+...+.+++++|+..... ++++.. ..+.+.+++ .+..+|++.++.+.... .....-+.-|.....
T Consensus 88 ~~~~~~~~~~~~~~~ad~il~VvD~~~~~~~~d-~~l~~~l~~--~~~pvilV~NK~D~~~~~~~~~e~~~lg~~~~~~i 164 (456)
T 4dcu_A 88 FLAQIRQQAEIAMDEADVIIFMVNGREGVTAAD-EEVAKILYR--TKKPVVLAVNKLDNTEMRANIYDFYSLGFGEPYPI 164 (456)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEESSSCSCHHH-HHHHHHHTT--CCSCEEEEEECC---------CCSGGGSSSSEEEC
T ss_pred HHHHHHHHHHhhHhhCCEEEEEEeCCCCCChHH-HHHHHHHHH--cCCCEEEEEECccchhhhhhHHHHHHcCCCceEEe
Confidence 37888888888888899888765544 455554 345555443 34567777777765421 111111122333211
Q ss_pred cC---------------------------ceeeehhcCCCCCchhHHHHHHhcccc------------CceeEEEECCEe
Q psy18009 141 GS---------------------------LFVSLLQVGQSGAGKSTIIRLLFRFYD------------VESGDIFIDNQN 181 (277)
Q Consensus 141 g~---------------------------~~~~~~~~G~~GsGkttL~~~l~Gl~~------------~~~G~i~~~g~~ 181 (277)
.. ....+..+|..|+|||+|++.+.|... ...+.+.++|..
T Consensus 165 SA~~g~gv~~L~~~i~~~l~~~~~~~~~~~~~ki~ivG~~~vGKSslin~l~~~~~~~~~~~~gtt~~~~~~~~~~~~~~ 244 (456)
T 4dcu_A 165 SGTHGLGLGDLLDAVAEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 244 (456)
T ss_dssp CTTTCTTHHHHHHHHHTTGGGSCSSCCCTTCEEEEEECSTTSSHHHHHHHHHTSTTEEECC------CTTSEEEEETTEE
T ss_pred ecccccchHHHHHHHHhhcccccccccccccceeEEecCCCCCHHHHHHHHhCCCccccCCCCCeEEEEEEEEEEECCce
Confidence 00 001122368899999999999997641 112456777776
Q ss_pred cc
Q psy18009 182 IK 183 (277)
Q Consensus 182 ~~ 183 (277)
+.
T Consensus 245 ~~ 246 (456)
T 4dcu_A 245 FV 246 (456)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 305
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=89.72 E-value=0.1 Score=48.43 Aligned_cols=17 Identities=35% Similarity=0.577 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHh
Q psy18009 149 QVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~ 165 (277)
..|+||||||||+++|+
T Consensus 28 i~G~NGaGKTTll~ai~ 44 (365)
T 3qf7_A 28 VEGPNGAGKSSLFEAIS 44 (365)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 48999999999999987
No 306
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=89.57 E-value=0.15 Score=48.49 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=25.2
Q ss_pred hcCCCCCchhHHHHHHhcc-----------ccCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRF-----------YDVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl-----------~~~~~G~i~~~g 179 (277)
.+|.+|||||||+++|+|. ..+..|.+.+++
T Consensus 162 LVG~~gAGKSTLL~~Lsg~~~~i~~~~ftTl~p~~G~V~~~~ 203 (416)
T 1udx_A 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSE 203 (416)
T ss_dssp EECCGGGCHHHHHHHHCSSCCEECCCTTCSSCCEEEEEECSS
T ss_pred EECCCCCcHHHHHHHHHcCCccccCcccceecceeeEEEecC
Confidence 4699999999999999998 345567777765
No 307
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=89.48 E-value=0.16 Score=41.67 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=34.5
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy18009 67 KQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRV 107 (277)
Q Consensus 67 rQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l 107 (277)
.+.+++|++++.+|+++++| ||++|....+.+++.|.+.
T Consensus 151 ~~~~~~a~~l~~~~~~~~ld--~Sald~~~v~~l~~~l~~~ 189 (191)
T 1oix_A 151 AVPTDEARAFAEKNGLSFIE--TSALDSTNVEAAFQTILTE 189 (191)
T ss_dssp CSCHHHHHHHHHHTTCEEEE--CCTTTCTTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCEEEE--EeCCCCCCHHHHHHHHHHH
Confidence 34578899999999999999 9999999999999988753
No 308
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=89.41 E-value=0.11 Score=42.97 Aligned_cols=19 Identities=32% Similarity=0.585 Sum_probs=17.0
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|.+||||||+++.|.++
T Consensus 6 i~G~~GsGKSTl~~~L~~~ 24 (204)
T 2if2_A 6 LTGNIGCGKSTVAQMFREL 24 (204)
T ss_dssp EEECTTSSHHHHHHHHHHT
T ss_pred EECCCCcCHHHHHHHHHHC
Confidence 4799999999999999983
No 309
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=89.10 E-value=0.14 Score=42.53 Aligned_cols=27 Identities=33% Similarity=0.492 Sum_probs=20.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g 179 (277)
..|.+||||||+++.|.+.. |...+++
T Consensus 23 l~G~~GsGKSTla~~L~~~l----g~~~i~~ 49 (202)
T 3t61_A 23 VMGVSGSGKSSVGEAIAEAC----GYPFIEG 49 (202)
T ss_dssp EECSTTSCHHHHHHHHHHHH----TCCEEEG
T ss_pred EECCCCCCHHHHHHHHHHHh----CCEEEeC
Confidence 47999999999999998654 3445544
No 310
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=88.66 E-value=0.89 Score=41.89 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=40.9
Q ss_pred eccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc---CceEEEEec
Q psy18009 60 ALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA---SRTTIIVAH 118 (277)
Q Consensus 60 ~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~---~~tiIiIsH 118 (277)
+.||.+++|++..|...+.+++++|.|+|..+ ...|...+++++. +..+|+|.|
T Consensus 108 g~Ls~~e~~~l~~a~~~l~~~~l~I~d~~~~s-----i~~i~~~ir~l~~~~gg~~lIVIDy 164 (338)
T 4a1f_A 108 GRLDDDQWENLAKCFDHLSQKKLFFYDKSYVR-----IEQIRLQLRKLKSQHKELGIAFIDY 164 (338)
T ss_dssp TCCCHHHHHHHHHHHHHHHHSCEEEECCTTCC-----HHHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcCCeEEeCCCCCc-----HHHHHHHHHHHHHhcCCCCEEEEec
Confidence 36999999999999999999999999998754 3356666666643 235666765
No 311
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=88.62 E-value=0.082 Score=54.09 Aligned_cols=27 Identities=30% Similarity=0.293 Sum_probs=22.4
Q ss_pred hcCCCCCchhHHHHHHhcccc-CceeEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD-VESGDI 175 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~-~~~G~i 175 (277)
..|+||||||||++.+.|+.. ++.|.+
T Consensus 581 I~GpNGsGKSTlLr~iagl~~~~~~G~~ 608 (765)
T 1ewq_A 581 ITGPNMAGKSTFLRQTALIALLAQVGSF 608 (765)
T ss_dssp EESCSSSSHHHHHHHHHHHHHHHTTTCC
T ss_pred EECCCCCChHHHHHHHHhhhhhcccCce
Confidence 479999999999999999864 556654
No 312
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=88.47 E-value=0.18 Score=40.65 Aligned_cols=20 Identities=45% Similarity=0.489 Sum_probs=17.2
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|++||||||+++.|....
T Consensus 8 l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 8 LNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EECCTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 37999999999999998644
No 313
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=88.38 E-value=0.17 Score=42.15 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=24.6
Q ss_pred hcCCCCCchhHHHHHHhccccC---ceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDV---ESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~---~~G~i~~~g~~ 181 (277)
..|.+|||||||++.|.+..+. .-|.+..++.+
T Consensus 11 i~G~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~ 46 (174)
T 1np6_A 11 FAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHD 46 (174)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEeCCCCCHHHHHHHHHHhccccCCceeEEeeCCCc
Confidence 4699999999999999987543 24677776544
No 314
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=88.04 E-value=0.2 Score=39.81 Aligned_cols=19 Identities=26% Similarity=0.076 Sum_probs=16.6
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|++||||||+++.|...
T Consensus 6 l~G~~GsGKsT~~~~L~~~ 24 (173)
T 3kb2_A 6 LEGPDCCFKSTVAAKLSKE 24 (173)
T ss_dssp EECSSSSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3699999999999999754
No 315
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=87.94 E-value=0.12 Score=47.35 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=25.6
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
.|.+|+|||||++.|.|...+.++++.+-+.+
T Consensus 62 ~G~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d 93 (341)
T 2p67_A 62 TGTPGAGKSTFLEAFGMLLIREGLKVAVIAVD 93 (341)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EcCCCCCHHHHHHHHHHHHHhcCCeEEEEeec
Confidence 79999999999999999877666666554433
No 316
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=87.68 E-value=0.29 Score=46.19 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=24.7
Q ss_pred hhcCCCCCchhHHHHHHhcc-----------ccCceeEEEECC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF-----------YDVESGDIFIDN 179 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl-----------~~~~~G~i~~~g 179 (277)
..+|.+|+|||||+++|.|. ..|..|.+.+.+
T Consensus 26 gIVG~pnvGKSTL~n~Ltg~~~~~~~~p~tTi~p~~g~v~v~~ 68 (396)
T 2ohf_A 26 GIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPD 68 (396)
T ss_dssp EEECCSSSSHHHHHHHHHC-------------CCSEEEEECCC
T ss_pred EEECCCCCCHHHHHHHHHCCCccccCCCccccCceeEEEEECC
Confidence 34799999999999999997 456677777665
No 317
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=87.65 E-value=0.21 Score=39.31 Aligned_cols=16 Identities=44% Similarity=0.721 Sum_probs=14.8
Q ss_pred hcCCCCCchhHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLL 164 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l 164 (277)
..|++||||||+++.|
T Consensus 6 l~G~~GsGKsT~a~~L 21 (179)
T 3lw7_A 6 ITGMPGSGKSEFAKLL 21 (179)
T ss_dssp EECCTTSCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 3699999999999999
No 318
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=87.34 E-value=0.25 Score=40.02 Aligned_cols=21 Identities=33% Similarity=0.700 Sum_probs=17.9
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||++.+.|..
T Consensus 6 ~ivG~~gvGKStLl~~l~~~~ 26 (184)
T 2zej_A 6 MIVGNTGSGKTTLLQQLMKTK 26 (184)
T ss_dssp EEESCTTSSHHHHHHHHTCC-
T ss_pred EEECCCCCCHHHHHHHHhcCC
Confidence 347999999999999999863
No 319
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=87.27 E-value=0.21 Score=41.50 Aligned_cols=20 Identities=35% Similarity=0.428 Sum_probs=17.4
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|++||||||+++.|.+..
T Consensus 30 l~G~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 30 LTGYMGAGKTTLGKAFARKL 49 (199)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 37999999999999998654
No 320
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=87.25 E-value=0.17 Score=44.00 Aligned_cols=32 Identities=38% Similarity=0.540 Sum_probs=24.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~ 182 (277)
..|++||||||+++.|..... .+.+.+++-.+
T Consensus 37 l~G~~GsGKSTla~~L~~~l~--~~~~~~~~D~~ 68 (253)
T 2p5t_B 37 LGGQSGAGKTTIHRIKQKEFQ--GNIVIIDGDSF 68 (253)
T ss_dssp EESCGGGTTHHHHHHHHHHTT--TCCEEECGGGG
T ss_pred EECCCCCCHHHHHHHHHHhcC--CCcEEEecHHH
Confidence 379999999999999987654 25677777554
No 321
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=87.18 E-value=0.22 Score=45.34 Aligned_cols=16 Identities=38% Similarity=0.823 Sum_probs=14.8
Q ss_pred hcCCCCCchhHHHHHH
Q psy18009 149 QVGQSGAGKSTIIRLL 164 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l 164 (277)
.+|+||||||+++++|
T Consensus 28 i~G~NGsGKS~lleAi 43 (339)
T 3qkt_A 28 IIGQNGSGKSSLLDAI 43 (339)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 4799999999999997
No 322
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=86.94 E-value=0.24 Score=41.26 Aligned_cols=20 Identities=35% Similarity=0.659 Sum_probs=17.4
Q ss_pred cCCCCCchhHHHHHHhcccc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~ 169 (277)
.|++||||||+++.|....+
T Consensus 18 ~G~sGsGKsTl~~~L~~~~~ 37 (204)
T 2qor_A 18 CGPSGVGKGTLIKKVLSEFP 37 (204)
T ss_dssp ECCTTSCHHHHHHHHHHHCT
T ss_pred ECCCCCCHHHHHHHHHHhCc
Confidence 79999999999999976553
No 323
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=86.91 E-value=0.25 Score=39.51 Aligned_cols=18 Identities=39% Similarity=0.586 Sum_probs=16.2
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|++||||||+++.|..
T Consensus 7 i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 7 TIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHh
Confidence 479999999999999985
No 324
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=86.58 E-value=0.12 Score=42.86 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=18.5
Q ss_pred cCCCCCchhHHHHHHhccccCc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVE 171 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~ 171 (277)
.|.+||||||+++.|.......
T Consensus 6 ~G~~GsGKsTl~~~L~~~l~~~ 27 (214)
T 1gtv_A 6 EGVDGAGKRTLVEKLSGAFRAA 27 (214)
T ss_dssp EEEEEEEHHHHHHHHHHHHHEE
T ss_pred EcCCCCCHHHHHHHHHHHHHhc
Confidence 6899999999999998766543
No 325
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=86.52 E-value=0.054 Score=45.86 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=21.7
Q ss_pred hcCCCCCchhHHHHHH-hccccCceeEEEECCE
Q psy18009 149 QVGQSGAGKSTIIRLL-FRFYDVESGDIFIDNQ 180 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l-~Gl~~~~~G~i~~~g~ 180 (277)
..|.+|+|||||+..+ .+..+...+.+++.+.
T Consensus 28 i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e 60 (247)
T 2dr3_A 28 LSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALE 60 (247)
T ss_dssp EEECTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EECCCCCCHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 3799999999997665 4444444455666654
No 326
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=86.41 E-value=0.27 Score=41.50 Aligned_cols=17 Identities=35% Similarity=0.813 Sum_probs=15.0
Q ss_pred hcCCCCCchhHHHHHHh
Q psy18009 149 QVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~ 165 (277)
..|+|||||||++.+|.
T Consensus 28 I~G~NgsGKStil~ai~ 44 (203)
T 3qks_A 28 IIGQNGSGKSSLLDAIL 44 (203)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHH
Confidence 47999999999999884
No 327
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=86.29 E-value=0.3 Score=45.04 Aligned_cols=22 Identities=50% Similarity=0.605 Sum_probs=18.8
Q ss_pred hhcCCCCCchhHHHHHHhcccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..+|.+|+|||||+++|+|...
T Consensus 41 ~vvG~~g~GKSTLln~L~~~~~ 62 (361)
T 2qag_A 41 MVVGESGLGKSTLINSLFLTDL 62 (361)
T ss_dssp EECCCTTSCHHHHHHHHTTCCC
T ss_pred EEEcCCCCCHHHHHHHHhCCCC
Confidence 3479999999999999988644
No 328
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=86.27 E-value=0.53 Score=38.41 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=26.1
Q ss_pred hcCCCCCchhHHHHHHhcc--------ccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF--------YDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl--------~~~~~G~i~~~g~~~~ 183 (277)
.+|.+|+|||+|++.+.+- ..+..+.+.++|..+.
T Consensus 28 ~vG~~~vGKSsli~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~ 70 (190)
T 1m2o_B 28 FLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT 70 (190)
T ss_dssp EEESTTSSHHHHHHHHHHSCCCCCCCCCSCEEEEEEETTEEEE
T ss_pred EECCCCCCHHHHHHHHhcCCCCccccCCCCCeEEEEECCEEEE
Confidence 4799999999999999872 2334577788875543
No 329
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=86.09 E-value=0.32 Score=41.79 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=25.1
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~ 182 (277)
..|++|+|||+++++|++.... -.+.+++.++
T Consensus 50 l~G~~GtGKT~la~~la~~~~~--~~~~i~~~~~ 81 (257)
T 1lv7_A 50 MVGPPGTGKTLLAKAIAGEAKV--PFFTISGSDF 81 (257)
T ss_dssp EECCTTSCHHHHHHHHHHHHTC--CEEEECSCSS
T ss_pred EECcCCCCHHHHHHHHHHHcCC--CEEEEeHHHH
Confidence 4799999999999999987643 2477777655
No 330
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=86.04 E-value=0.54 Score=38.68 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=25.4
Q ss_pred hcCCCCCchhHHHHHHhcc--------ccCceeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRF--------YDVESGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl--------~~~~~G~i~~~g~~~ 182 (277)
.+|.+|+|||||++.+.+- ..+..+.+.++|..+
T Consensus 30 lvG~~~vGKSsLi~~l~~~~~~~~~~t~~~~~~~~~~~~~~l 71 (198)
T 1f6b_A 30 FLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTF 71 (198)
T ss_dssp EEEETTSSHHHHHHHHSCC------CCCCCSCEEEEETTEEE
T ss_pred EECCCCCCHHHHHHHHhcCCCCccCCCCCceeEEEEECCEEE
Confidence 4799999999999999872 223457777777544
No 331
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=85.76 E-value=0.43 Score=40.58 Aligned_cols=26 Identities=27% Similarity=0.342 Sum_probs=21.0
Q ss_pred eehhcCCCCCchhHHHHHHhccccCc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFYDVE 171 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~~~~ 171 (277)
.+..+|.+|+|||||+++|.|.....
T Consensus 31 ~i~lvG~~g~GKStlin~l~g~~~~~ 56 (239)
T 3lxx_A 31 RIVLVGKTGAGKSATGNSILGRKVFH 56 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSCCSC
T ss_pred EEEEECCCCCCHHHHHHHHcCCCcCc
Confidence 34458999999999999999975543
No 332
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=85.67 E-value=0.31 Score=39.31 Aligned_cols=20 Identities=40% Similarity=0.513 Sum_probs=17.0
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|++||||||+++.|....
T Consensus 9 i~G~~GsGKsTla~~La~~l 28 (175)
T 1via_A 9 FIGFMGSGKSTLARALAKDL 28 (175)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 46999999999999997543
No 333
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=85.34 E-value=0.27 Score=43.12 Aligned_cols=21 Identities=33% Similarity=0.295 Sum_probs=18.3
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|++|+|||||+..+++...
T Consensus 35 i~G~~GsGKTtl~~~l~~~~~ 55 (279)
T 1nlf_A 35 LVSPGGAGKSMLALQLAAQIA 55 (279)
T ss_dssp EEESTTSSHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHh
Confidence 479999999999999998654
No 334
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=85.20 E-value=0.32 Score=41.91 Aligned_cols=28 Identities=25% Similarity=0.426 Sum_probs=22.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFI 177 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~ 177 (277)
..|++||||||+++.|...... .+.+..
T Consensus 31 i~G~~GsGKsT~~~~l~~~l~~-~~~~~~ 58 (229)
T 4eaq_A 31 FEGPEGSGKTTVINEVYHRLVK-DYDVIM 58 (229)
T ss_dssp EECCTTSCHHHHHHHHHHHHTT-TSCEEE
T ss_pred EEcCCCCCHHHHHHHHHHHHhc-CCCcee
Confidence 3699999999999999988776 555543
No 335
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=85.20 E-value=0.34 Score=39.09 Aligned_cols=19 Identities=26% Similarity=0.358 Sum_probs=16.4
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|.+||||||+++.|...
T Consensus 8 i~G~~GsGKsT~~~~L~~~ 26 (192)
T 1kht_A 8 VTGVPGVGSTTSSQLAMDN 26 (192)
T ss_dssp EECCTTSCHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3799999999999999753
No 336
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=85.10 E-value=0.35 Score=39.16 Aligned_cols=18 Identities=39% Similarity=0.479 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|.+||||||+++.|..
T Consensus 9 l~G~~GsGKST~~~~La~ 26 (186)
T 3cm0_A 9 FLGPPGAGKGTQASRLAQ 26 (186)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 379999999999999973
No 337
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=84.97 E-value=0.35 Score=39.44 Aligned_cols=19 Identities=42% Similarity=0.448 Sum_probs=16.6
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 5 i~G~~GsGKsT~~~~L~~~ 23 (205)
T 2jaq_A 5 IFGTVGAGKSTISAEISKK 23 (205)
T ss_dssp EECCTTSCHHHHHHHHHHH
T ss_pred EECCCccCHHHHHHHHHHh
Confidence 3699999999999999874
No 338
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=84.64 E-value=0.25 Score=47.06 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=30.2
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccC
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT 184 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~ 184 (277)
+|++|+||||++..|++...+.++++.+.+.+...
T Consensus 104 ~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 104 VGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp ECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred ECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 58999999999999999998888899887766543
No 339
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=84.57 E-value=0.34 Score=42.28 Aligned_cols=20 Identities=15% Similarity=0.155 Sum_probs=17.2
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|++|||||||++.|++..
T Consensus 6 I~G~~GSGKSTla~~La~~~ 25 (253)
T 2ze6_A 6 IYGPTCSGKTDMAIQIAQET 25 (253)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHhcC
Confidence 47999999999999998643
No 340
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=84.42 E-value=0.23 Score=44.57 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=30.9
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEeccCCcHHHHhcceEEEcCCchhhHHhH
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSI 208 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~vpqd~~~~n~~~ 208 (277)
..|.+|||||||++.|.++..+. | . . .+.+.+|+||+.+++.+.
T Consensus 36 I~G~sGsGKSTla~~L~~~l~~~-g------~--------~-~~~~~iv~~D~f~~~~~~ 79 (290)
T 1odf_A 36 FSGPQGSGKSFTSIQIYNHLMEK-Y------G--------G-EKSIGYASIDDFYLTHED 79 (290)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHH-H------G--------G-GSCEEEEEGGGGBCCHHH
T ss_pred EECCCCCCHHHHHHHHHHHhhhc-C------C--------C-CceEEEeccccccCChHH
Confidence 47999999999999999988764 2 0 0 233556699876555443
No 341
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=84.30 E-value=0.36 Score=39.15 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|.+||||||+++.|..
T Consensus 10 l~G~~GsGKST~~~~L~~ 27 (193)
T 2rhm_A 10 VTGHPATGKTTLSQALAT 27 (193)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999964
No 342
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=84.18 E-value=0.24 Score=44.70 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=29.7
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEECCEeccC
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT 184 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~~ 184 (277)
.|.+|+||||++..|++...+.++++.+.+.+...
T Consensus 104 ~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 104 VGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp ECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 68999999999999999988878888887766543
No 343
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=84.17 E-value=0.8 Score=37.13 Aligned_cols=37 Identities=27% Similarity=0.395 Sum_probs=26.1
Q ss_pred eehhcCCCCCchhHHHHHHhcc-----ccCcee----EEEECCEec
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF-----YDVESG----DIFIDNQNI 182 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl-----~~~~~G----~i~~~g~~~ 182 (277)
.+..+|..|+|||+|++.+.+- ..+..+ .+.++|+.+
T Consensus 22 ki~ivG~~~vGKSsL~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 67 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSY 67 (184)
T ss_dssp EEEEECCTTSCHHHHHHHHHHSSCCCCCCTTCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCcCCCcceEEEEEEECCEEE
Confidence 3345799999999999877653 234445 677888665
No 344
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=84.13 E-value=0.36 Score=38.89 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=16.9
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|..||||||+++.|....
T Consensus 6 i~G~~GsGKsT~~~~L~~~l 25 (194)
T 1nks_A 6 VTGIPGVGKSTVLAKVKEIL 25 (194)
T ss_dssp EEECTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 36999999999999997643
No 345
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=84.07 E-value=0.31 Score=50.04 Aligned_cols=20 Identities=30% Similarity=0.248 Sum_probs=18.1
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|+||||||||++++.|+.
T Consensus 612 ItGpNGsGKSTlLr~iagl~ 631 (800)
T 1wb9_A 612 ITGPNMGGKSTYMRQTALIA 631 (800)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCChHHHHHHHHHHH
Confidence 47999999999999999874
No 346
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=84.06 E-value=0.35 Score=44.19 Aligned_cols=27 Identities=30% Similarity=0.500 Sum_probs=21.6
Q ss_pred hcCCCCCchhHHHHHHhc--cccCceeEE
Q psy18009 149 QVGQSGAGKSTIIRLLFR--FYDVESGDI 175 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G--l~~~~~G~i 175 (277)
.+|..|||||||+++|.| +.+...|.+
T Consensus 39 vvG~~~sGKSSLln~l~g~~~lp~~~~~v 67 (360)
T 3t34_A 39 VVGGQSSGKSSVLESIVGKDFLPRGSGIV 67 (360)
T ss_dssp EECBTTSSHHHHHHHHHTSCCSCCCSSSC
T ss_pred EECCCCCcHHHHHHHHhCCCcCCCCCCcc
Confidence 479999999999999999 445555544
No 347
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=83.76 E-value=0.74 Score=37.80 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=25.9
Q ss_pred eehhcCCCCCchhHHHHHHhccccC-----------ceeEEEECCEec
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFYDV-----------ESGDIFIDNQNI 182 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~~~-----------~~G~i~~~g~~~ 182 (277)
.+..+|..|+|||+|++.+.|.... ..+.+.++|+.+
T Consensus 25 ki~vvG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEV 72 (195)
T ss_dssp EEEEECSTTSSHHHHHHHTCCEECCGGGTTTSCTTEEEEEEEETTEEE
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCccCCCCcccceEEEEEEECCEEE
Confidence 3445799999999999999764321 235567777654
No 348
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=83.48 E-value=0.45 Score=38.48 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=16.0
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|+.||||||+++.|..
T Consensus 10 l~G~~GsGKst~a~~La~ 27 (185)
T 3trf_A 10 LIGLMGAGKTSVGSQLAK 27 (185)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999964
No 349
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=83.15 E-value=0.39 Score=44.29 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=0.0
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEE
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFI 177 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~ 177 (277)
+|.+|||||++++.|.+......+.+.+
T Consensus 41 ~G~~G~GKs~~~~~~~~~~~~~~~~~~~ 68 (392)
T 4ag6_A 41 LAKPGAGKSFTAKMLLLREYMQGSRVII 68 (392)
T ss_dssp ECCTTSSHHHHHHHHHHHHHTTTCCEEE
T ss_pred EcCCCCCHHHHHHHHHHHHHHCCCEEEE
No 350
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=83.03 E-value=1.8 Score=40.89 Aligned_cols=62 Identities=15% Similarity=0.320 Sum_probs=41.6
Q ss_pred CCCEEEEecCCCCCCH-HHHHHHHHHHHHHhcC-ceEEEEecCc-chhcc-CceEEE-eeCcEEEEe
Q psy18009 79 APQIVLLDEATSALDT-KTERNIQSALNRVCAS-RTTIIVAHRL-STIIH-ADEILV-MHAGEIVER 140 (277)
Q Consensus 79 ~p~ilILDEPTa~LD~-~~~~~l~~~l~~l~~~-~tiIiIsH~l-~ev~~-~Drv~v-L~dG~iv~~ 140 (277)
++++|++||+..-.+. ...+.++..+..+.+. ..+|++||+. .++.. .+++.- +..|.++..
T Consensus 194 ~~~vL~IDEi~~l~~~~~~q~~l~~~l~~l~~~~~~iIitt~~~~~~l~~l~~~L~sR~~~g~~i~l 260 (440)
T 2z4s_A 194 KVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSEFQDRLVSRFQMGLVAKL 260 (440)
T ss_dssp TCSEEEEECGGGGSSCHHHHHHHHHHHHHHHTTTCEEEEEESSCGGGCSSCCHHHHHHHHSSBCCBC
T ss_pred CCCEEEEeCcccccCChHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHHHhhccCCeEEEe
Confidence 8999999999887764 6777899999888765 4677788874 33322 333332 345655543
No 351
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=82.97 E-value=0.58 Score=38.30 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=32.3
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy18009 70 VAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRV 107 (277)
Q Consensus 70 v~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l 107 (277)
...|++++.+|+++++| ||++|....+.+++.|.+.
T Consensus 130 ~~~a~~l~~~~~~~~~d--~Sal~~~~i~~l~~~l~~~ 165 (199)
T 2f9l_A 130 TDEARAFAEKNNLSFIE--TSALDSTNVEEAFKNILTE 165 (199)
T ss_dssp HHHHHHHHHHTTCEEEE--CCTTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEE--EeCCCCCCHHHHHHHHHHH
Confidence 46689999999999999 9999999999999988764
No 352
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=82.79 E-value=0.13 Score=52.82 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=25.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEecc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~~~ 183 (277)
..|++|+|||+|+++|+|..+.. .+.+++.++.
T Consensus 243 L~Gp~GtGKTtLarala~~l~~~--~i~v~~~~l~ 275 (806)
T 1ypw_A 243 LYGPPGTGKTLIARAVANETGAF--FFLINGPEIM 275 (806)
T ss_dssp ECSCTTSSHHHHHHHHHHTTTCE--EEEEEHHHHS
T ss_pred EECcCCCCHHHHHHHHHHHcCCc--EEEEEchHhh
Confidence 35999999999999999987643 4677765543
No 353
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=82.77 E-value=0.44 Score=39.22 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=18.5
Q ss_pred cCCCCCchhHHHHHHhccccCc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVE 171 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~ 171 (277)
.|++|+|||+|+++++......
T Consensus 60 ~G~~GtGKT~la~~i~~~~~~~ 81 (202)
T 2w58_A 60 HGSFGVGKTYLLAAIANELAKR 81 (202)
T ss_dssp ECSTTSSHHHHHHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHHHHHHc
Confidence 7999999999999998765443
No 354
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=82.68 E-value=0.51 Score=38.13 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=15.6
Q ss_pred hcCCCCCchhHHHHHHh
Q psy18009 149 QVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~ 165 (277)
..|.+||||||+++.|.
T Consensus 16 i~G~~GsGKst~~~~l~ 32 (180)
T 3iij_A 16 LTGTPGVGKTTLGKELA 32 (180)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHH
Confidence 47999999999999997
No 355
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=82.19 E-value=0.74 Score=48.08 Aligned_cols=24 Identities=29% Similarity=0.263 Sum_probs=19.5
Q ss_pred hcCCCCCchhHHHHHH--------hccccCce
Q psy18009 149 QVGQSGAGKSTIIRLL--------FRFYDVES 172 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l--------~Gl~~~~~ 172 (277)
..|+|||||||+++.+ .|..-|..
T Consensus 667 ItGpNGsGKSTlLr~ial~~~~aq~G~~vpa~ 698 (934)
T 3thx_A 667 ITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE 698 (934)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHHHHTCCBSEE
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhcCCccccc
Confidence 4799999999999999 67655543
No 356
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=82.17 E-value=0.54 Score=37.90 Aligned_cols=18 Identities=33% Similarity=0.473 Sum_probs=15.7
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 8 l~G~~GsGKsT~a~~L~~ 25 (196)
T 1tev_A 8 VLGGPGAGKGTQCARIVE 25 (196)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999864
No 357
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=81.93 E-value=0.56 Score=38.46 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=17.6
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|..||||||+++.|.....
T Consensus 9 i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 9 FEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp EECCTTSSHHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHHHHHHHh
Confidence 379999999999999976444
No 358
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=81.91 E-value=0.41 Score=39.15 Aligned_cols=27 Identities=37% Similarity=0.459 Sum_probs=20.8
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeEEEECC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g 179 (277)
...|..||||||+++.|... |..+++.
T Consensus 12 ~i~G~~GsGKST~~~~La~~-----g~~~id~ 38 (203)
T 1uf9_A 12 GITGNIGSGKSTVAALLRSW-----GYPVLDL 38 (203)
T ss_dssp EEEECTTSCHHHHHHHHHHT-----TCCEEEH
T ss_pred EEECCCCCCHHHHHHHHHHC-----CCEEEcc
Confidence 34799999999999999864 5555553
No 359
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=81.88 E-value=0.49 Score=44.26 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=21.2
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEE
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFI 177 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~ 177 (277)
..|++|+|||||+++|.|.. .|.+..
T Consensus 174 l~G~~GsGKSTl~~~l~~~~---~g~~~~ 199 (377)
T 1svm_A 174 FKGPIDSGKTTLAAALLELC---GGKALN 199 (377)
T ss_dssp EECSTTSSHHHHHHHHHHHH---CCEEEC
T ss_pred EECCCCCCHHHHHHHHHhhc---CCcEEE
Confidence 37999999999999999853 566654
No 360
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=81.88 E-value=0.45 Score=41.71 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=24.3
Q ss_pred hhcCCCCCchhHHHHHHhccccCceeE-EEECC
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYDVESGD-IFIDN 179 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~~~~G~-i~~~g 179 (277)
...|++|+|||+++++|++......+. +.++.
T Consensus 51 ll~G~~GtGKt~la~~la~~~~~~~~~~~~~~~ 83 (311)
T 4fcw_A 51 LFLGPTGVGKTELAKTLAATLFDTEEAMIRIDM 83 (311)
T ss_dssp EEESCSSSSHHHHHHHHHHHHHSCGGGEEEEEG
T ss_pred EEECCCCcCHHHHHHHHHHHHcCCCcceEEeec
Confidence 347999999999999999887665553 44443
No 361
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=81.80 E-value=0.57 Score=38.03 Aligned_cols=19 Identities=47% Similarity=0.726 Sum_probs=16.5
Q ss_pred cCCCCCchhHHHHHHhccc
Q psy18009 150 VGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~ 168 (277)
.|..||||||+++.|....
T Consensus 6 ~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 6 EGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
Confidence 6999999999999997644
No 362
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=81.52 E-value=6.3 Score=36.23 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=45.9
Q ss_pred HHHHHHHHHhc--cCCCEEEEecCCCCCCHHH-------------HHHHHHHHHHH----hc-CceEEEEecCcch----
Q psy18009 67 KQRVAIARTLL--KAPQIVLLDEATSALDTKT-------------ERNIQSALNRV----CA-SRTTIIVAHRLST---- 122 (277)
Q Consensus 67 rQrv~IAral~--~~p~ilILDEPTa~LD~~~-------------~~~l~~~l~~l----~~-~~tiIiIsH~l~e---- 122 (277)
.|..++++.+. .+++++|+|.+++-....+ .+.+.+.+++| ++ +.++|+++|-...
T Consensus 127 e~~~~~~~~l~~~~~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~~~~VI~~nq~~~~~~~~ 206 (356)
T 1u94_A 127 EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVM 206 (356)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEEEEC--------
T ss_pred HHHHHHHHHHHhccCCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHhCCEEEEEeccccccCcc
Confidence 45567777774 5799999999999875322 12344455554 23 4577778875322
Q ss_pred ------------hcc-CceEEEeeCcEEEEec
Q psy18009 123 ------------IIH-ADEILVMHAGEIVERG 141 (277)
Q Consensus 123 ------------v~~-~Drv~vL~dG~iv~~g 141 (277)
+.. +|-++.++..+....+
T Consensus 207 fg~~~~~~gG~~l~~~advrl~l~r~~~~k~g 238 (356)
T 1u94_A 207 FGNPETTTGGNALKFYASVRLDIRRIGAVKEG 238 (356)
T ss_dssp ------CTTCSHHHHHCSEEEEEEEEEEEESS
T ss_pred cCCCcccCCCcceeeeccEEEEEEEeeeeccC
Confidence 233 8888888877655444
No 363
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=81.45 E-value=0.68 Score=36.82 Aligned_cols=22 Identities=36% Similarity=0.540 Sum_probs=18.3
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.|.+-
T Consensus 6 ki~v~G~~~~GKSsli~~l~~~ 27 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTIQLIQN 27 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3445799999999999999864
No 364
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=81.37 E-value=0.69 Score=42.96 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=26.4
Q ss_pred hcCCCCCchhHHHHHHhccccCceeE-EEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGD-IFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~-i~~~g~~~ 182 (277)
..|++|+|||||+..+++...+..|. +++++...
T Consensus 66 I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 46999999999999999877666665 47766543
No 365
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=81.35 E-value=0.62 Score=37.07 Aligned_cols=18 Identities=44% Similarity=0.589 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 7 l~G~~GsGKsT~a~~La~ 24 (173)
T 1e6c_A 7 MVGARGCGMTTVGRELAR 24 (173)
T ss_dssp EESCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999964
No 366
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=81.29 E-value=0.61 Score=37.62 Aligned_cols=19 Identities=32% Similarity=0.609 Sum_probs=16.2
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 5 l~G~~GsGKsT~~~~L~~~ 23 (195)
T 2pbr_A 5 FEGIDGSGKTTQAKKLYEY 23 (195)
T ss_dssp EECSTTSCHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3699999999999999753
No 367
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=81.13 E-value=0.56 Score=41.79 Aligned_cols=29 Identities=34% Similarity=0.508 Sum_probs=21.7
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g 179 (277)
..|++||||||+++.|....+ .+.+.+++
T Consensus 38 l~G~sGsGKSTla~~L~~~~~--~~~~~Is~ 66 (287)
T 1gvn_B 38 LGGQPGSGKTSLRSAIFEETQ--GNVIVIDN 66 (287)
T ss_dssp EECCTTSCTHHHHHHHHHHTT--TCCEEECT
T ss_pred EECCCCCCHHHHHHHHHHHhC--CCeEEEec
Confidence 379999999999999975332 25566665
No 368
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=81.10 E-value=0.48 Score=38.12 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=11.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 10 l~G~~GsGKST~a~~La~ 27 (183)
T 2vli_A 10 INGPFGVGKTHTAHTLHE 27 (183)
T ss_dssp EECCC----CHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 379999999999999974
No 369
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=80.93 E-value=0.6 Score=37.20 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=18.1
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||+|++.+.+-
T Consensus 12 ki~v~G~~~~GKSsli~~l~~~ 33 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIEK 33 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3445799999999999999764
No 370
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=80.85 E-value=0.64 Score=39.10 Aligned_cols=19 Identities=47% Similarity=0.704 Sum_probs=16.2
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|++|+||+||++.|...
T Consensus 6 i~GPSG~GK~Tl~~~L~~~ 24 (186)
T 1ex7_A 6 ISGPSGTGKSTLLKKLFAE 24 (186)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 3799999999999998643
No 371
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=80.76 E-value=0.59 Score=39.08 Aligned_cols=18 Identities=33% Similarity=0.468 Sum_probs=16.4
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|.+||||||+++.|..
T Consensus 9 i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 9 LTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999986
No 372
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=80.72 E-value=0.67 Score=36.75 Aligned_cols=18 Identities=44% Similarity=0.482 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 5 l~G~~GsGKsT~a~~L~~ 22 (168)
T 2pt5_A 5 LIGFMCSGKSTVGSLLSR 22 (168)
T ss_dssp EESCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999965
No 373
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=80.72 E-value=0.55 Score=43.19 Aligned_cols=17 Identities=41% Similarity=0.874 Sum_probs=15.3
Q ss_pred hcCCCCCchhHHHHHHh
Q psy18009 149 QVGQSGAGKSTIIRLLF 165 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~ 165 (277)
..|.||||||+++.+|+
T Consensus 30 i~G~NGaGKT~ileAI~ 46 (371)
T 3auy_A 30 IIGENGSGKSSIFEAVF 46 (371)
T ss_dssp EEECTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 47999999999999985
No 374
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=80.55 E-value=0.66 Score=41.52 Aligned_cols=21 Identities=33% Similarity=0.444 Sum_probs=18.4
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||+++|.|..
T Consensus 12 aIvG~~nvGKSTLln~L~g~~ 32 (301)
T 1ega_A 12 AIVGRPNVGKSTLLNKLLGQK 32 (301)
T ss_dssp EEECSSSSSHHHHHHHHHTCS
T ss_pred EEECCCCCCHHHHHHHHHCCC
Confidence 347999999999999999863
No 375
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=80.49 E-value=1.1 Score=39.08 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=25.5
Q ss_pred hcCCCCCchhHHHHHHhcccc-----------CceeEEEECCEec
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD-----------VESGDIFIDNQNI 182 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~-----------~~~G~i~~~g~~~ 182 (277)
.+|..|+|||||+++|.|... ...|.+.++|..+
T Consensus 6 lvG~~n~GKSTL~n~L~g~~~~v~~~pg~Tv~~~~~~~~~~~~~~ 50 (256)
T 3iby_A 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLLGEHLI 50 (256)
T ss_dssp EEESTTSSHHHHHHHHHTTSEEEEECTTSSSEEEEEEEEETTEEE
T ss_pred EECCCCCCHHHHHHHHHCCCCCccCCCCceEEEEEEEEEECCeEE
Confidence 479999999999999999732 2346677777654
No 376
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=80.47 E-value=3.6 Score=35.69 Aligned_cols=60 Identities=18% Similarity=0.314 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHhccCCCEEEEecCCCCCCHH----------HHHHHHHHHHHHhc----CceEEE-EecCcch
Q psy18009 63 SGGEKQRVAIARTLLKAPQIVLLDEATSALDTK----------TERNIQSALNRVCA----SRTTII-VAHRLST 122 (277)
Q Consensus 63 SgGqrQrv~IAral~~~p~ilILDEPTa~LD~~----------~~~~l~~~l~~l~~----~~tiIi-IsH~l~e 122 (277)
+++++.+..+..+...+|.+|++||+.+.++.. ....++..+..+.. ...+|+ +|++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~v~vi~~tn~~~~ 171 (297)
T 3b9p_A 97 DGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQE 171 (297)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEETGGGTSBCC-----CCSHHHHHHHHHHHHHCC------CEEEEEEESCGGG
T ss_pred hHHHHHHHHHHHHHHcCCcEEEeccHHHhccccccCcchHHHHHHHHHHHHHhcccccCCCCcEEEEeecCChhh
Confidence 467777888888888899999999998776532 23334455544422 234444 7887543
No 377
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=80.17 E-value=0.71 Score=37.33 Aligned_cols=18 Identities=56% Similarity=0.663 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 7 l~G~~GsGKsT~a~~La~ 24 (184)
T 2iyv_A 7 LVGLPGSGKSTIGRRLAK 24 (184)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999964
No 378
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=80.14 E-value=0.71 Score=37.75 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=16.4
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 15 l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 15 ITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4799999999999999753
No 379
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=80.11 E-value=0.63 Score=40.59 Aligned_cols=21 Identities=33% Similarity=0.441 Sum_probs=18.4
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||+++|.|..
T Consensus 7 ~lvG~~g~GKTTL~n~l~g~~ 27 (271)
T 3k53_A 7 ALVGNPNVGKTTIFNALTGLR 27 (271)
T ss_dssp EEEECSSSSHHHHHHHHHTTC
T ss_pred EEECCCCCCHHHHHHHHhCCC
Confidence 347999999999999999974
No 380
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=80.10 E-value=0.51 Score=45.04 Aligned_cols=28 Identities=32% Similarity=0.444 Sum_probs=0.0
Q ss_pred cCCCCCchhHHHHHHhccccCceeEEEE
Q psy18009 150 VGQSGAGKSTIIRLLFRFYDVESGDIFI 177 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~~~~G~i~~ 177 (277)
+|++|+||||++..|++.....++++.+
T Consensus 103 vG~~GsGKTTt~~kLA~~l~~~G~kVll 130 (433)
T 3kl4_A 103 VGVQGSGKTTTAGKLAYFYKKRGYKVGL 130 (433)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHcCCeEEE
No 381
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=79.87 E-value=0.56 Score=40.93 Aligned_cols=28 Identities=29% Similarity=0.392 Sum_probs=20.3
Q ss_pred hhcCCCCCchhHHHHHHh---ccccCceeEE
Q psy18009 148 LQVGQSGAGKSTIIRLLF---RFYDVESGDI 175 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~---Gl~~~~~G~i 175 (277)
...|++||||||+++.|. |+.-.+.|.+
T Consensus 13 ~i~G~~GsGKsTla~~la~~lg~~~~d~g~~ 43 (233)
T 3r20_A 13 AVDGPAGTGKSSVSRGLARALGARYLDTGAM 43 (233)
T ss_dssp EEECCTTSSHHHHHHHHHHHHTCEEEEHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCcccCCcH
Confidence 347999999999999997 4433344443
No 382
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=79.79 E-value=0.54 Score=39.05 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.7
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|.+|||||||+..|.+..+
T Consensus 9 i~G~sGsGKTTl~~~L~~~l~ 29 (169)
T 1xjc_A 9 VVGYKHSGKTTLMEKWVAAAV 29 (169)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhhH
Confidence 368999999999999987654
No 383
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=79.76 E-value=0.73 Score=38.27 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=15.6
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|+.||||||+++.|..
T Consensus 5 l~G~~GsGKsT~a~~L~~ 22 (216)
T 3fb4_A 5 LMGLPGAGKGTQAEQIIE 22 (216)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999954
No 384
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=79.75 E-value=0.66 Score=37.62 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 14 l~G~~GsGKsT~~~~La~ 31 (196)
T 2c95_A 14 VVGGPGSGKGTQCEKIVQ 31 (196)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 379999999999999964
No 385
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=79.63 E-value=0.7 Score=35.87 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 8 i~v~G~~~~GKssl~~~l~~~ 28 (168)
T 1z2a_A 8 MVVVGNGAVGKSSMIQRYCKG 28 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECcCCCCHHHHHHHHHcC
Confidence 345799999999999999864
No 386
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=79.54 E-value=0.75 Score=37.61 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=17.2
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|..||||||+++.|....
T Consensus 9 l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 9 FEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp EECCTTSSHHHHHHHHHHTS
T ss_pred EEcCCCCCHHHHHHHHHHHH
Confidence 37999999999999998654
No 387
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=79.53 E-value=0.69 Score=37.23 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=18.2
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||||++.|.+..
T Consensus 52 ~vvG~~g~GKSsll~~l~~~~ 72 (193)
T 2ged_A 52 IIAGPQNSGKTSLLTLLTTDS 72 (193)
T ss_dssp EEECCTTSSHHHHHHHHHHSS
T ss_pred EEECCCCCCHHHHHHHHhcCC
Confidence 347999999999999998864
No 388
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=79.41 E-value=0.84 Score=40.53 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=24.3
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECCEe
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g~~ 181 (277)
..|++|+|||+|++++++... .+.+.+++..
T Consensus 54 L~Gp~GtGKT~la~ala~~~~--~~~i~v~~~~ 84 (301)
T 3cf0_A 54 FYGPPGCGKTLLAKAIANECQ--ANFISIKGPE 84 (301)
T ss_dssp EECSSSSSHHHHHHHHHHHTT--CEEEEECHHH
T ss_pred EECCCCcCHHHHHHHHHHHhC--CCEEEEEhHH
Confidence 379999999999999998653 4567777544
No 389
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=79.39 E-value=0.65 Score=35.73 Aligned_cols=20 Identities=35% Similarity=0.524 Sum_probs=17.0
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+-
T Consensus 7 ~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 7 VVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEESTTSSHHHHHHHHHHS
T ss_pred EEECCCCCCHHHHHHHHHhC
Confidence 34789999999999999764
No 390
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=79.32 E-value=0.69 Score=38.06 Aligned_cols=18 Identities=39% Similarity=0.429 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 15 l~G~~GsGKST~~~~L~~ 32 (212)
T 2wwf_A 15 FEGLDRSGKSTQSKLLVE 32 (212)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHH
Confidence 379999999999999974
No 391
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=79.31 E-value=0.73 Score=35.88 Aligned_cols=21 Identities=33% Similarity=0.525 Sum_probs=17.5
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||+|++.+.|..
T Consensus 6 ~~vG~~~~GKSsli~~l~~~~ 26 (166)
T 3q72_A 6 LLLGAPGVGKSALARIFGGVE 26 (166)
T ss_dssp EEEESTTSSHHHHHHHHCCC-
T ss_pred EEECCCCCCHHHHHHHHcCcc
Confidence 347999999999999998754
No 392
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=79.30 E-value=0.82 Score=35.54 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=17.3
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+-
T Consensus 7 ~v~G~~~~GKssli~~l~~~ 26 (172)
T 2erx_A 7 AVFGAGGVGKSSLVLRFVKG 26 (172)
T ss_dssp EEECCTTSSHHHHHHHHHTC
T ss_pred EEECCCCCCHHHHHHHHHcC
Confidence 34799999999999999873
No 393
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=79.29 E-value=0.71 Score=37.80 Aligned_cols=19 Identities=32% Similarity=0.357 Sum_probs=16.6
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|.+||||||+++.|.+.
T Consensus 7 i~G~~GsGKst~~~~la~~ 25 (208)
T 3ake_A 7 IDGPSASGKSSVARRVAAA 25 (208)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4699999999999999764
No 394
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=79.26 E-value=0.73 Score=35.58 Aligned_cols=20 Identities=30% Similarity=0.492 Sum_probs=17.3
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+|..|+|||||++.+.+-.
T Consensus 6 v~G~~~~GKSsli~~l~~~~ 25 (161)
T 2dyk_A 6 IVGRPNVGKSSLFNRLLKKR 25 (161)
T ss_dssp EECCTTSSHHHHHHHHHHCC
T ss_pred EECCCCCCHHHHHHHHhCCC
Confidence 47999999999999998753
No 395
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=79.19 E-value=0.82 Score=41.74 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=39.9
Q ss_pred eccCHHHHHHHHHHHHhcc------CCCEEEEecCCCCCCHHHHHHHHHHHHHHhc
Q psy18009 60 ALLSGGEKQRVAIARTLLK------APQIVLLDEATSALDTKTERNIQSALNRVCA 109 (277)
Q Consensus 60 ~~LSgGqrQrv~IAral~~------~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~ 109 (277)
..+|+|++|+++.+.+++. +|+++. +|++|....+.|++.|.++.+
T Consensus 209 ~~~s~~~~~~l~~a~~l~~~~~~~~~~~vl~----~Sal~g~gi~~L~~~I~~~~~ 260 (337)
T 2qm8_A 209 ERRASAAASEYRAALHILTPPSATWTPPVVT----ISGLHGKGLDSLWSRIEDHRS 260 (337)
T ss_dssp HHHHHHHHHHHHHHHTTBCCSBTTBCCCEEE----EBTTTTBSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccccccCCCCCEEE----EeCCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999887 688876 999999999999999988643
No 396
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=79.14 E-value=0.71 Score=37.53 Aligned_cols=19 Identities=32% Similarity=0.424 Sum_probs=16.2
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 17 l~G~~GsGKsT~a~~L~~~ 35 (199)
T 2bwj_A 17 IIGGPGSGKGTQCEKLVEK 35 (199)
T ss_dssp EEECTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3699999999999999653
No 397
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=79.13 E-value=0.83 Score=35.78 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=18.1
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||+|++.+.|-.
T Consensus 7 i~i~G~~~vGKSsl~~~l~~~~ 28 (175)
T 2nzj_A 7 VVLLGDPGVGKTSLASLFAGKQ 28 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHCC-
T ss_pred EEEECCCCccHHHHHHHHhcCC
Confidence 3457999999999999998754
No 398
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=79.10 E-value=0.75 Score=35.53 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=17.2
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+-
T Consensus 8 ~v~G~~~~GKssl~~~l~~~ 27 (168)
T 1u8z_A 8 IMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEECSTTSSHHHHHHHHHHS
T ss_pred EEECCCCCCHHHHHHHHHhC
Confidence 34799999999999999864
No 399
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=78.93 E-value=0.99 Score=42.03 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=24.1
Q ss_pred hcCCCCCchhHHHHHHhccc-----------cCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY-----------DVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~-----------~~~~G~i~~~g 179 (277)
.+|.+|+|||||+++|.|.. .|..|.+.+.+
T Consensus 7 IVG~pnvGKSTL~n~Lt~~~~~v~~~p~tTi~p~~g~v~~~~ 48 (363)
T 1jal_A 7 IVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPD 48 (363)
T ss_dssp EECCTTSSHHHHHHHHHHTC------CCCCCCCCSSEEECCC
T ss_pred EECCCCCCHHHHHHHHHCCCCcccCCCCceECceEEEEecCC
Confidence 47999999999999999832 34557777665
No 400
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=78.70 E-value=0.86 Score=35.84 Aligned_cols=21 Identities=38% Similarity=0.581 Sum_probs=18.1
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.|.+-
T Consensus 12 i~v~G~~~~GKssl~~~l~~~ 32 (181)
T 3tw8_B 12 LLIIGDSGVGKSSLLLRFADN 32 (181)
T ss_dssp EEEECCTTSCHHHHHHHHCSC
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 345799999999999999875
No 401
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=78.67 E-value=0.85 Score=36.34 Aligned_cols=18 Identities=33% Similarity=0.420 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+.+.|..
T Consensus 12 l~G~~GsGKSTva~~La~ 29 (168)
T 1zuh_A 12 LIGFMGSGKSSLAQELGL 29 (168)
T ss_dssp EESCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999964
No 402
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=78.59 E-value=0.83 Score=37.98 Aligned_cols=18 Identities=33% Similarity=0.412 Sum_probs=15.7
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|+.||||||+++.|..
T Consensus 5 l~G~~GsGKsT~a~~L~~ 22 (216)
T 3dl0_A 5 LMGLPGAGKGTQGERIVE 22 (216)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999964
No 403
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=78.56 E-value=0.77 Score=36.92 Aligned_cols=18 Identities=33% Similarity=0.514 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 11 l~G~~GsGKsT~~~~L~~ 28 (194)
T 1qf9_A 11 VLGGPGSGKGTQCANIVR 28 (194)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 469999999999999964
No 404
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=78.54 E-value=2.4 Score=38.06 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=39.3
Q ss_pred cCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--Cce--EEEEecC
Q psy18009 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRT--TIIVAHR 119 (277)
Q Consensus 62 LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~t--iIiIsH~ 119 (277)
||.++++++..|...+.++++++.|+|..+ ...+...++++.. +.. +|+|.|-
T Consensus 134 l~~~~~~~l~~a~~~l~~~~i~i~d~~~~~-----~~~i~~~i~~l~~~~~~~~~lVVID~l 190 (315)
T 3bh0_A 134 FASEDWGKLSMAIGEISNSNINIFDKAGQS-----VNYIWSKTRQTKRKNPGKRVIVMIDYL 190 (315)
T ss_dssp HCSSCHHHHHHHHHHHHTSCEEEECCSCCB-----HHHHHHHHHHHHHTSSSCCEEEEEECG
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEECCCCCC-----HHHHHHHHHHHHHhcCCCCeEEEEeCc
Confidence 899999999999998889999999998744 3345666666643 234 6667663
No 405
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=78.10 E-value=1 Score=35.53 Aligned_cols=23 Identities=26% Similarity=0.379 Sum_probs=18.6
Q ss_pred eehhcCCCCCchhHHHHHHhccc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+..+|..|+|||||++.+.+-.
T Consensus 12 ~i~v~G~~~~GKssli~~l~~~~ 34 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKDGA 34 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 34457999999999999997643
No 406
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=78.03 E-value=0.95 Score=35.29 Aligned_cols=20 Identities=40% Similarity=0.564 Sum_probs=17.1
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+.
T Consensus 6 ~ivG~~~~GKSsli~~l~~~ 25 (169)
T 3q85_A 6 MLVGESGVGKSTLAGTFGGL 25 (169)
T ss_dssp EEECSTTSSHHHHHHHHHCC
T ss_pred EEECCCCCCHHHHHHHHHhc
Confidence 34799999999999999764
No 407
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=78.01 E-value=0.89 Score=37.32 Aligned_cols=18 Identities=39% Similarity=0.558 Sum_probs=15.7
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 20 l~G~~GsGKsT~~~~L~~ 37 (203)
T 1ukz_A 20 VLGGPGAGKGTQCEKLVK 37 (203)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 469999999999999863
No 408
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=78.00 E-value=0.84 Score=35.50 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=18.4
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.+.+-.
T Consensus 9 i~v~G~~~~GKSsli~~l~~~~ 30 (170)
T 1z0j_A 9 VCLLGDTGVGKSSIMWRFVEDS 30 (170)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 3457999999999999998754
No 409
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=77.96 E-value=0.87 Score=39.61 Aligned_cols=19 Identities=37% Similarity=0.515 Sum_probs=16.5
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|.+||||||+++.|...
T Consensus 9 l~G~pGSGKSTla~~La~~ 27 (260)
T 3a4m_A 9 LTGLPGVGKSTFSKNLAKI 27 (260)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHH
Confidence 4799999999999999753
No 410
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=77.95 E-value=0.85 Score=35.37 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=17.5
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||||++.+.+-.
T Consensus 7 ~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1ek0_A 7 VLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEECSTTSSHHHHHHHHHHSC
T ss_pred EEECCCCCCHHHHHHHHhcCC
Confidence 347999999999999997643
No 411
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=77.89 E-value=0.83 Score=36.48 Aligned_cols=21 Identities=38% Similarity=0.550 Sum_probs=18.1
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||||++.+.+-.
T Consensus 27 ~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 3pqc_A 27 AFVGRSNVGKSSLLNALFNRK 47 (195)
T ss_dssp EEEEBTTSSHHHHHHHHHTSC
T ss_pred EEECCCCCCHHHHHHHHHcCc
Confidence 347999999999999998864
No 412
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=77.86 E-value=0.61 Score=42.00 Aligned_cols=25 Identities=28% Similarity=0.230 Sum_probs=20.4
Q ss_pred hcCCCCCchhHHHHHHhccccCcee
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESG 173 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G 173 (277)
..|++|+||||+++++++......+
T Consensus 51 l~Gp~G~GKTtla~~la~~l~~~~~ 75 (340)
T 1sxj_C 51 FYGPPGTGKTSTIVALAREIYGKNY 75 (340)
T ss_dssp EECSSSSSHHHHHHHHHHHHHTTSH
T ss_pred EECCCCCCHHHHHHHHHHHHcCCCc
Confidence 3799999999999999987654443
No 413
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=77.73 E-value=0.83 Score=37.60 Aligned_cols=18 Identities=44% Similarity=0.398 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 14 l~G~~GsGKsT~~~~L~~ 31 (215)
T 1nn5_A 14 LEGVDRAGKSTQSRKLVE 31 (215)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 379999999999999974
No 414
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=77.73 E-value=0.84 Score=36.69 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=17.6
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||||++.|.+-.
T Consensus 27 ~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 1svi_A 27 ALAGRSNVGKSSFINSLINRK 47 (195)
T ss_dssp EEEEBTTSSHHHHHHHHHTC-
T ss_pred EEECCCCCCHHHHHHHHhCCC
Confidence 347999999999999998753
No 415
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=77.72 E-value=0.87 Score=35.28 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=17.1
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+-
T Consensus 7 ~v~G~~~~GKssli~~l~~~ 26 (167)
T 1c1y_A 7 VVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEECSTTSSHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHcC
Confidence 34799999999999999763
No 416
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=77.67 E-value=2.4 Score=38.06 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=33.3
Q ss_pred HHHHHHHHHhc---cCCCEEEEecCCCCCCH--------HH----HHHHHHHHHHHhc--CceEEEEecCc
Q psy18009 67 KQRVAIARTLL---KAPQIVLLDEATSALDT--------KT----ERNIQSALNRVCA--SRTTIIVAHRL 120 (277)
Q Consensus 67 rQrv~IAral~---~~p~ilILDEPTa~LD~--------~~----~~~l~~~l~~l~~--~~tiIiIsH~l 120 (277)
.+.++.++.++ .+++++|+|+.++-+.. .+ ...+...|+.+.+ +.++|++.|-.
T Consensus 188 ~~~l~~l~~~~~~~~~~~lvVIDsl~~l~~~~~~~~g~~~~r~~~~~~~l~~L~~la~~~~~~Vi~~nq~~ 258 (324)
T 2z43_A 188 IAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVM 258 (324)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEETTTTHHHHHHSCTTTSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEC-
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCcHHHhhhhhcCcccHHHHHHHHHHHHHHHHHHHHHhCCEEEEEccee
Confidence 35677777777 57999999999987643 12 2233334444433 45677777754
No 417
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=77.67 E-value=0.51 Score=49.20 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=16.4
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|+||||||||++.+.++
T Consensus 678 ItGPNGaGKSTlLr~i~~i 696 (918)
T 3thx_B 678 ITGPNMGGKSSYIKQVALI 696 (918)
T ss_dssp EESCCCHHHHHHHHHHHHH
T ss_pred EECCCCCchHHHHHHHHHH
Confidence 4699999999999998753
No 418
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=77.48 E-value=0.7 Score=38.31 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=17.3
Q ss_pred cCCCCCchhHHHHHHhcccc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~ 169 (277)
.|+.|+|||+|++++.....
T Consensus 58 ~G~~G~GKT~la~~l~~~~~ 77 (242)
T 3bos_A 58 WGPVKSGRTHLIHAACARAN 77 (242)
T ss_dssp ECSTTSSHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHH
Confidence 79999999999999976543
No 419
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=77.47 E-value=0.89 Score=35.05 Aligned_cols=20 Identities=25% Similarity=0.400 Sum_probs=16.9
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||||++.+.+-
T Consensus 7 ~v~G~~~~GKSsli~~l~~~ 26 (167)
T 1kao_A 7 VVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEECCTTSSHHHHHHHHHHS
T ss_pred EEECCCCCCHHHHHHHHHcC
Confidence 34799999999999999753
No 420
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=77.44 E-value=0.85 Score=38.25 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|+.||||||+++.|..
T Consensus 10 l~G~~GsGKsT~~~~La~ 27 (222)
T 1zak_A 10 ISGAPASGKGTQCELIKT 27 (222)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999974
No 421
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=77.41 E-value=0.94 Score=37.25 Aligned_cols=18 Identities=39% Similarity=0.446 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 25 l~G~~GsGKST~a~~La~ 42 (201)
T 2cdn_A 25 LLGPPGAGKGTQAVKLAE 42 (201)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999964
No 422
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=77.19 E-value=0.91 Score=35.73 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 11 i~v~G~~~~GKSsli~~l~~~ 31 (182)
T 1ky3_A 11 VIILGDSGVGKTSLMHRYVND 31 (182)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 345799999999999999764
No 423
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=77.11 E-value=1 Score=35.39 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=24.7
Q ss_pred hhcCCCCCchhHHHHHHhcccc-----------CceeEEEECCEecc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFYD-----------VESGDIFIDNQNIK 183 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~~-----------~~~G~i~~~g~~~~ 183 (277)
..+|..|+|||||++.+.+-.. .....+.++|..+.
T Consensus 12 ~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (178)
T 2lkc_A 12 TIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKIT 58 (178)
T ss_dssp EEESCTTTTHHHHHHHHHTTCSSCSSCCSSSTTCCCCEEEETTEEEE
T ss_pred EEECCCCCCHHHHHHHHhCCccccCCCCceeEeeeEEEEEeCCceEE
Confidence 3479999999999999976321 11244667776553
No 424
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=77.06 E-value=0.97 Score=37.82 Aligned_cols=19 Identities=37% Similarity=0.387 Sum_probs=16.3
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 9 l~G~~GsGKsT~a~~La~~ 27 (220)
T 1aky_A 9 LIGPPGAGKGTQAPNLQER 27 (220)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3699999999999999653
No 425
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=77.02 E-value=0.88 Score=38.36 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=15.9
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 12 l~G~~GsGKsT~a~~La~ 29 (227)
T 1zd8_A 12 IMGAPGSGKGTVSSRITT 29 (227)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999974
No 426
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=76.96 E-value=0.93 Score=35.31 Aligned_cols=21 Identities=14% Similarity=0.341 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 9 i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1z08_A 9 VVLLGEGCVGKTSLVLRYCEN 29 (170)
T ss_dssp EEEECCTTSCHHHHHHHHHHC
T ss_pred EEEECcCCCCHHHHHHHHHcC
Confidence 345799999999999999864
No 427
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=76.92 E-value=1 Score=39.31 Aligned_cols=22 Identities=55% Similarity=0.726 Sum_probs=18.6
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||+++|+|..
T Consensus 11 I~vvG~~g~GKSTLin~L~~~~ 32 (274)
T 3t5d_A 11 LMVVGESGLGKSTLINSLFLTD 32 (274)
T ss_dssp EEEEECTTSSHHHHHHHHSSSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 3457999999999999998754
No 428
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=76.92 E-value=0.83 Score=35.91 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=17.8
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 12 i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 12 LVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 345799999999999999865
No 429
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=76.62 E-value=0.87 Score=35.39 Aligned_cols=22 Identities=32% Similarity=0.508 Sum_probs=18.0
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.+.+-.
T Consensus 6 i~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1g16_A 6 ILLIGDSGVGKSCLLVRFVEDK 27 (170)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 3447999999999999998653
No 430
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=76.60 E-value=0.96 Score=36.03 Aligned_cols=20 Identities=40% Similarity=0.351 Sum_probs=17.4
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+|..|+|||||++.+.+-.
T Consensus 6 v~G~~~~GKSsli~~l~~~~ 25 (190)
T 2cxx_A 6 FAGRSNVGKSTLIYRLTGKK 25 (190)
T ss_dssp EEEBTTSSHHHHHHHHHSCC
T ss_pred EECCCCCCHHHHHHHHhCcC
Confidence 47899999999999998853
No 431
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=76.42 E-value=1.1 Score=35.38 Aligned_cols=20 Identities=30% Similarity=0.521 Sum_probs=17.1
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|+.|+|||++++.++...
T Consensus 48 l~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 48 LIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 37999999999999997654
No 432
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=76.38 E-value=0.98 Score=36.36 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=18.5
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|.+|+|||||++.+.+-.
T Consensus 19 i~ivG~~~vGKSsL~~~l~~~~ 40 (181)
T 1fzq_A 19 ILLLGLDNAGKTTLLKQLASED 40 (181)
T ss_dssp EEEEESTTSSHHHHHHHHCCSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 3457999999999999998763
No 433
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=76.31 E-value=0.99 Score=35.49 Aligned_cols=21 Identities=24% Similarity=0.526 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 10 i~v~G~~~~GKSsli~~l~~~ 30 (177)
T 1wms_A 10 VILLGDGGVGKSSLMNRYVTN 30 (177)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 345799999999999999864
No 434
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=76.27 E-value=1 Score=34.92 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=17.2
Q ss_pred ehhcCCCCCchhHHHHHHhc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~G 166 (277)
+..+|..|+|||||++.+.+
T Consensus 9 i~v~G~~~~GKssli~~l~~ 28 (170)
T 1r2q_A 9 LVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 34579999999999999986
No 435
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=76.10 E-value=1 Score=38.37 Aligned_cols=18 Identities=28% Similarity=0.551 Sum_probs=16.1
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|.+||||||+++.|.+
T Consensus 21 i~G~~gsGKst~~~~l~~ 38 (236)
T 1q3t_A 21 IDGPASSGKSTVAKIIAK 38 (236)
T ss_dssp EECSSCSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999975
No 436
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=76.00 E-value=0.8 Score=40.77 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=18.2
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|++|+|||+|++++.+...
T Consensus 42 l~G~~GtGKT~la~~i~~~~~ 62 (324)
T 1l8q_A 42 IYGSVGTGKTHLLQAAGNEAK 62 (324)
T ss_dssp EECSSSSSHHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHHH
Confidence 379999999999999987654
No 437
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=75.83 E-value=1 Score=35.88 Aligned_cols=21 Identities=33% Similarity=0.444 Sum_probs=18.1
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.|.+-
T Consensus 10 i~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 10 TVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 345799999999999999875
No 438
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=75.60 E-value=1.3 Score=38.11 Aligned_cols=23 Identities=35% Similarity=0.466 Sum_probs=19.4
Q ss_pred eehhcCCCCCchhHHHHHHhccc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+..+|..|+|||||+++|.|..
T Consensus 23 ~I~lvG~~g~GKSSlin~l~~~~ 45 (247)
T 3lxw_A 23 RLILVGRTGAGKSATGNSILGQR 45 (247)
T ss_dssp EEEEESSTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCcHHHHHHHHhCCC
Confidence 34458999999999999999864
No 439
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=75.46 E-value=1.1 Score=35.15 Aligned_cols=23 Identities=22% Similarity=0.404 Sum_probs=18.6
Q ss_pred eehhcCCCCCchhHHHHHHhccc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+..+|..|+|||||++.+.+-.
T Consensus 17 ~i~v~G~~~~GKSsli~~l~~~~ 39 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLHQFTEKK 39 (179)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 34457999999999999998643
No 440
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=75.44 E-value=1.1 Score=37.79 Aligned_cols=18 Identities=33% Similarity=0.409 Sum_probs=15.7
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 5 l~G~~GsGKsT~a~~La~ 22 (223)
T 2xb4_A 5 IFGPNGSGKGTQGNLVKD 22 (223)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999964
No 441
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=75.44 E-value=1.1 Score=35.96 Aligned_cols=21 Identities=38% Similarity=0.563 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.|.+-
T Consensus 24 i~vvG~~~~GKSsli~~l~~~ 44 (190)
T 3con_A 24 LVVVGAGGVGKSALTIQLIQN 44 (190)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHHcC
Confidence 345799999999999999764
No 442
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=75.40 E-value=1.1 Score=39.22 Aligned_cols=18 Identities=39% Similarity=0.586 Sum_probs=16.1
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|.+||||||+++.|..
T Consensus 7 l~G~~GsGKST~a~~L~~ 24 (301)
T 1ltq_A 7 TIGCPGSGKSTWAREFIA 24 (301)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999999974
No 443
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=75.38 E-value=1 Score=39.27 Aligned_cols=20 Identities=25% Similarity=0.368 Sum_probs=17.6
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|++|+|||++++++++..
T Consensus 59 l~Gp~GtGKT~la~~la~~~ 78 (297)
T 3b9p_A 59 LFGPPGNGKTLLARAVATEC 78 (297)
T ss_dssp EESSSSSCHHHHHHHHHHHT
T ss_pred EECcCCCCHHHHHHHHHHHh
Confidence 47999999999999998754
No 444
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=75.34 E-value=1.7 Score=39.02 Aligned_cols=43 Identities=14% Similarity=0.082 Sum_probs=32.8
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc----CceEEEEecCcc
Q psy18009 78 KAPQIVLLDEATSALDTKTERNIQSALNRVCA----SRTTIIVAHRLS 121 (277)
Q Consensus 78 ~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~----~~tiIiIsH~l~ 121 (277)
.+|.+|+|||+... |+.....|.+++..+.. +..+|+++|+.+
T Consensus 124 ~~~~vlilDE~~~l-~~~~~~~L~~~~~~~~~~~~~~~~iI~~~~~~~ 170 (389)
T 1fnn_A 124 DLYMFLVLDDAFNL-APDILSTFIRLGQEADKLGAFRIALVIVGHNDA 170 (389)
T ss_dssp TCCEEEEEETGGGS-CHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTH
T ss_pred CCeEEEEEECcccc-chHHHHHHHHHHHhCCCCCcCCEEEEEEECCch
Confidence 45789999999876 88888888888766554 346666899874
No 445
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=75.27 E-value=1.2 Score=34.97 Aligned_cols=21 Identities=14% Similarity=0.398 Sum_probs=17.8
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||+|++.+.+-
T Consensus 9 i~v~G~~~~GKssl~~~l~~~ 29 (178)
T 2hxs_A 9 IVVLGDGASGKTSLTTCFAQE 29 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHGG
T ss_pred EEEECcCCCCHHHHHHHHHhC
Confidence 345799999999999999864
No 446
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=75.07 E-value=1.1 Score=34.84 Aligned_cols=20 Identities=45% Similarity=0.620 Sum_probs=17.1
Q ss_pred ehhcCCCCCchhHHHHHHhc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~G 166 (277)
+..+|..|+|||+|++.+.+
T Consensus 10 i~v~G~~~~GKssl~~~l~~ 29 (171)
T 1upt_A 10 ILILGLDGAGKTTILYRLQV 29 (171)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 34579999999999999975
No 447
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=75.03 E-value=1.3 Score=35.36 Aligned_cols=23 Identities=17% Similarity=0.345 Sum_probs=19.2
Q ss_pred ehhcCCCCCchhHHHHHHhcccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~~ 169 (277)
+..+|..|+|||+|++.+.|...
T Consensus 17 i~vvG~~~~GKssL~~~l~~~~~ 39 (198)
T 3t1o_A 17 IVYYGPGLSGKTTNLKWIYSKVP 39 (198)
T ss_dssp EEEECSTTSSHHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHHhhcc
Confidence 44579999999999999988654
No 448
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=75.03 E-value=0.02 Score=55.57 Aligned_cols=60 Identities=12% Similarity=0.167 Sum_probs=44.3
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhcC--ceEEEEecCcchh--cc-CceEEEeeCcEEEE
Q psy18009 74 RTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS--RTTIIVAHRLSTI--IH-ADEILVMHAGEIVE 139 (277)
Q Consensus 74 ral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~~--~tiIiIsH~l~ev--~~-~Drv~vL~dG~iv~ 139 (277)
|||..| +|||| ||++.+||. ...+. .++.+. .++.+++|.|+++ .. +|++..+..+.++.
T Consensus 28 ralt~d-dvlLm-p~~s~~~p~-~v~l~---~eLt~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gii~ 92 (514)
T 1jcn_A 28 DDLTYN-DFLIL-PGFIDFIAD-EVDLT---SALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIH 92 (514)
T ss_dssp SCCCGG-GEEEC-CCCCCSCGG-GCBCC---EESSSSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEEEC
T ss_pred cccccC-cEEec-cCccCCCcc-eeEEE---eeccCCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeEEe
Confidence 799999 99999 999999994 32221 123232 3567899999998 44 89998888777764
No 449
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=75.02 E-value=1.1 Score=37.42 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=15.6
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 5 l~G~~GsGKsT~a~~L~~ 22 (214)
T 1e4v_A 5 LLGAPVAGKGTQAQFIME 22 (214)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 368999999999999964
No 450
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=74.79 E-value=1.1 Score=35.45 Aligned_cols=22 Identities=27% Similarity=0.481 Sum_probs=18.3
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.+.+-
T Consensus 13 ki~v~G~~~~GKSsli~~l~~~ 34 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLYQYTDG 34 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 3445799999999999999864
No 451
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=74.46 E-value=0.93 Score=35.94 Aligned_cols=20 Identities=45% Similarity=0.614 Sum_probs=17.1
Q ss_pred ehhcCCCCCchhHHHHHHhc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~G 166 (277)
+..+|..|+|||||++.+.+
T Consensus 21 i~v~G~~~~GKssli~~l~~ 40 (183)
T 1moz_A 21 ILILGLDGAGKTTILYRLQI 40 (183)
T ss_dssp EEEEEETTSSHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 34479999999999999985
No 452
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=74.39 E-value=1.2 Score=34.48 Aligned_cols=18 Identities=44% Similarity=0.482 Sum_probs=16.1
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
.+|..|+|||+|++.+.+
T Consensus 5 ~~G~~~~GKssl~~~l~~ 22 (164)
T 1r8s_A 5 MVGLDAAGKTTILYKLKL 22 (164)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHc
Confidence 479999999999999975
No 453
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=74.22 E-value=1.2 Score=35.81 Aligned_cols=22 Identities=27% Similarity=0.588 Sum_probs=18.3
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.|.+-
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~~ 48 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLSRFTRN 48 (193)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 3445799999999999999874
No 454
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=74.10 E-value=1.5 Score=39.36 Aligned_cols=31 Identities=26% Similarity=0.635 Sum_probs=23.9
Q ss_pred hcCCCCCchhHHHHHHhccccCc--eeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE--SGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~--~G~i~~~g 179 (277)
..|++|+|||+|++.+++..... ...++++.
T Consensus 49 i~G~~G~GKTtl~~~l~~~~~~~~~~~~~~i~~ 81 (389)
T 1fnn_A 49 LLGRPGTGKTVTLRKLWELYKDKTTARFVYING 81 (389)
T ss_dssp EECCTTSSHHHHHHHHHHHHTTSCCCEEEEEET
T ss_pred EECCCCCCHHHHHHHHHHHHhhhcCeeEEEEeC
Confidence 37999999999999999877654 24556653
No 455
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=73.99 E-value=1.2 Score=35.07 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.1
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.|.+-
T Consensus 20 ki~v~G~~~~GKSsli~~l~~~ 41 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTLQFMYD 41 (187)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 3445799999999999999864
No 456
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=73.94 E-value=1.3 Score=39.08 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=18.3
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||++.|.|..
T Consensus 7 ~lvG~~nvGKSTL~n~L~g~~ 27 (272)
T 3b1v_A 7 ALIGNPNSGKTSLFNLITGHN 27 (272)
T ss_dssp EEECCTTSSHHHHHHHHHCCC
T ss_pred EEECCCCCCHHHHHHHHHCCC
Confidence 347999999999999999963
No 457
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=73.89 E-value=1.4 Score=35.07 Aligned_cols=22 Identities=36% Similarity=0.448 Sum_probs=18.4
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||+|++.+.+-.
T Consensus 21 i~v~G~~~~GKssl~~~l~~~~ 42 (186)
T 1ksh_A 21 LLMLGLDNAGKTTILKKFNGED 42 (186)
T ss_dssp EEEECSTTSSHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 3457999999999999998744
No 458
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=73.82 E-value=1.5 Score=35.73 Aligned_cols=21 Identities=29% Similarity=0.610 Sum_probs=17.9
Q ss_pred eehhcCCCCCchhHHHHHHhc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~G 166 (277)
.+..+|.+|+|||+|++.+.|
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~ 28 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAG 28 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 345589999999999999986
No 459
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=73.66 E-value=1 Score=40.13 Aligned_cols=31 Identities=16% Similarity=0.486 Sum_probs=23.3
Q ss_pred hcCCCCCchhHHHHHHhccccCc----eeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVE----SGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~----~G~i~~~g 179 (277)
..|++|+|||+|++.+++..... ...+++++
T Consensus 50 i~G~~G~GKTtl~~~l~~~~~~~~~~~~~~~~i~~ 84 (386)
T 2qby_A 50 IYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYINT 84 (386)
T ss_dssp EEECTTSSHHHHHHHHHHHHHHHTCSSCEEEEEEH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhcCCceEEEEEC
Confidence 37999999999999999876442 34566654
No 460
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=73.30 E-value=2.9 Score=38.71 Aligned_cols=50 Identities=10% Similarity=0.017 Sum_probs=37.1
Q ss_pred HhhcccCcccccCCeeeccCHHHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc
Q psy18009 44 AILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA 109 (277)
Q Consensus 44 ~vL~~l~l~i~~~~~v~~LSgGqrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~ 109 (277)
++++.+++.-..+.....|| ||+||++||+++ +++.-.+...++++++.+
T Consensus 297 e~l~~~gl~~f~~~~~~~lS-G~~~r~ala~gl---------------i~~~R~~~y~~l~~e~~~ 346 (358)
T 2rcn_A 297 EFHDYLGHCKYRDCKHDADP-GCAIREAVENGA---------------IAETRFENYHRILESMAQ 346 (358)
T ss_dssp GGGGGTTCSSSTTCCSSSCT-TCHHHHHHHHTS---------------SCHHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCchhcCCCcccCC-HHHHHHHHHhcC---------------CCHHHHHHHHHHHHHHHh
Confidence 46777788767788889999 999999999886 355555556666666643
No 461
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=73.21 E-value=1.2 Score=34.89 Aligned_cols=21 Identities=24% Similarity=0.453 Sum_probs=17.6
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 17 i~v~G~~~~GKssli~~l~~~ 37 (179)
T 2y8e_A 17 LVFLGEQSVGKTSLITRFMYD 37 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 345799999999999999753
No 462
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=73.07 E-value=1.3 Score=37.98 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=17.3
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
...|++|+|||+|+++++..
T Consensus 48 ll~G~~GtGKT~la~~la~~ 67 (268)
T 2r62_A 48 LLVGPPGTGKTLLAKAVAGE 67 (268)
T ss_dssp CCBCSSCSSHHHHHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHHH
Confidence 34799999999999999864
No 463
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=72.98 E-value=1.3 Score=34.83 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=18.2
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.+.+-
T Consensus 14 ki~v~G~~~~GKSsli~~l~~~ 35 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVKD 35 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 3445799999999999999864
No 464
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=72.93 E-value=1.3 Score=36.39 Aligned_cols=22 Identities=23% Similarity=0.445 Sum_probs=18.4
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.|.+-.
T Consensus 15 i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 15 IIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 3457999999999999998754
No 465
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=72.80 E-value=1.4 Score=35.67 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=17.6
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.+.+-
T Consensus 17 i~v~G~~~~GKSsli~~l~~~ 37 (206)
T 2bov_A 17 VIMVGSGGVGKSALTLQFMYD 37 (206)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 345799999999999999764
No 466
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=72.56 E-value=1.5 Score=35.43 Aligned_cols=22 Identities=18% Similarity=0.433 Sum_probs=17.6
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.|.+-.
T Consensus 29 i~vvG~~~~GKSsLi~~l~~~~ 50 (192)
T 2il1_A 29 VIIIGSRGVGKTSLMERFTDDT 50 (192)
T ss_dssp EEEECSTTSSHHHHHHHHCC--
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 4457999999999999998753
No 467
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=72.47 E-value=1.5 Score=37.72 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=16.3
Q ss_pred hhcCCCCCchhHHHHHHhc
Q psy18009 148 LQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~G 166 (277)
...|..||||||+++.|..
T Consensus 26 ~I~G~~GSGKST~a~~L~~ 44 (252)
T 1uj2_A 26 GVSGGTASGKSSVCAKIVQ 44 (252)
T ss_dssp EEECSTTSSHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH
Confidence 3479999999999999965
No 468
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=72.39 E-value=1.2 Score=43.28 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=25.9
Q ss_pred hhcCCCCCchhHHHHHHhc--cccCceeEEEECCEecc
Q psy18009 148 LQVGQSGAGKSTIIRLLFR--FYDVESGDIFIDNQNIK 183 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~G--l~~~~~G~i~~~g~~~~ 183 (277)
+..|.+|||||+++++|.. +..+..+++.+.+.+.+
T Consensus 171 LIaG~TGSGKSt~L~~li~sLl~~~~p~~v~l~liDpK 208 (512)
T 2ius_A 171 LVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMIDPK 208 (512)
T ss_dssp EEECCTTSSHHHHHHHHHHHHHTTCCTTTEEEEEECCS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHhCCCceEEEEEECCc
Confidence 4479999999999999875 45555566666555544
No 469
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=72.38 E-value=4.1 Score=37.08 Aligned_cols=66 Identities=17% Similarity=0.082 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHHhc--CceEEEEecCcchh---------cc-CceEEEee
Q psy18009 66 EKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHRLSTI---------IH-ADEILVMH 133 (277)
Q Consensus 66 qrQrv~IAral~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~~--~~tiIiIsH~l~ev---------~~-~Drv~vL~ 133 (277)
..+.-.|++++..++.+++||.+|. +.+.+.++.+.+ +.++|++||.-... .. .-.|..+.
T Consensus 230 ~~eL~~i~ral~~de~llvLDa~t~-------~~~~~~~~~~~~~~~it~iilTKlD~~a~~G~~l~~~~~~~~pi~~i~ 302 (328)
T 3e70_C 230 MDEMKKIARVTKPNLVIFVGDALAG-------NAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVG 302 (328)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEGGGT-------THHHHHHHHHHHHSCCCEEEEECGGGCSCCHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEecHHH-------HHHHHHHHHHHHhcCCCEEEEeCcCCccchhHHHHHHHHHCCCEEEEe
Confidence 3455668999998989999996665 345555566553 45788999943211 11 34566666
Q ss_pred CcEEE
Q psy18009 134 AGEIV 138 (277)
Q Consensus 134 dG~iv 138 (277)
.|+.+
T Consensus 303 ~Ge~v 307 (328)
T 3e70_C 303 VGQGY 307 (328)
T ss_dssp CSSST
T ss_pred CCCCc
Confidence 66554
No 470
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=72.19 E-value=1.4 Score=35.66 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=18.2
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.|.+-.
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (207)
T 1vg8_A 11 VIILGDSGVGKTSLMNQYVNKK 32 (207)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 3457999999999999998643
No 471
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=72.12 E-value=1.6 Score=35.62 Aligned_cols=15 Identities=53% Similarity=0.877 Sum_probs=0.0
Q ss_pred CCCCCchhHHHHHHh
Q psy18009 151 GQSGAGKSTIIRLLF 165 (277)
Q Consensus 151 G~~GsGkttL~~~l~ 165 (277)
|+.|+|||++++.+.
T Consensus 52 G~~G~GKT~l~~~~~ 66 (250)
T 1njg_A 52 GTRGVGKTSIARLLA 66 (250)
T ss_dssp CSTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
No 472
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=72.01 E-value=1.5 Score=34.37 Aligned_cols=31 Identities=26% Similarity=0.404 Sum_probs=21.6
Q ss_pred hcCCCCCchhHHHHHHhccccCceeEEEECC
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~~~~G~i~~~g 179 (277)
..|..|+|||+++++|........+.+.++.
T Consensus 29 l~G~~GtGKt~lA~~i~~~~~~~~~~~v~~~ 59 (145)
T 3n70_A 29 LYGAPGTGRMTGARYLHQFGRNAQGEFVYRE 59 (145)
T ss_dssp EESSTTSSHHHHHHHHHHSSTTTTSCCEEEE
T ss_pred EECCCCCCHHHHHHHHHHhCCccCCCEEEEC
Confidence 4799999999999999876443333322543
No 473
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=71.87 E-value=1.4 Score=36.89 Aligned_cols=18 Identities=28% Similarity=0.562 Sum_probs=15.8
Q ss_pred hcCCCCCchhHHHHHHhc
Q psy18009 149 QVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~G 166 (277)
..|..||||||+++.|..
T Consensus 10 l~G~~GsGKsT~a~~La~ 27 (217)
T 3be4_A 10 LIGAPGSGKGTQCEFIKK 27 (217)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 369999999999999964
No 474
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=71.76 E-value=1.4 Score=38.01 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=18.0
Q ss_pred hcCCCCCchhHHHHHHhcccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~~ 169 (277)
..|+.|+|||+|+++++....
T Consensus 56 l~G~~GtGKT~la~~la~~~~ 76 (285)
T 3h4m_A 56 LYGPPGTGKTLLAKAVATETN 76 (285)
T ss_dssp EESSSSSSHHHHHHHHHHHTT
T ss_pred EECCCCCcHHHHHHHHHHHhC
Confidence 379999999999999987653
No 475
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=71.76 E-value=1.7 Score=35.26 Aligned_cols=22 Identities=23% Similarity=0.307 Sum_probs=18.4
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.+.+-.
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (203)
T 1zbd_A 11 ILIIGNSSVGKTSFLFRYADDS 32 (203)
T ss_dssp EEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 4457999999999999998753
No 476
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=71.74 E-value=1.6 Score=37.58 Aligned_cols=17 Identities=35% Similarity=0.462 Sum_probs=15.4
Q ss_pred cCCCCCchhHHHHHHhc
Q psy18009 150 VGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~G 166 (277)
.|+.||||||+++.|..
T Consensus 35 ~G~~GsGKsT~a~~L~~ 51 (243)
T 3tlx_A 35 LGAPGSGKGTQSLNLKK 51 (243)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 79999999999999963
No 477
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=71.70 E-value=1.5 Score=34.60 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=16.9
Q ss_pred ehhcCCCCCchhHHHHHHhc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~G 166 (277)
+..+|..|+|||||++.+.+
T Consensus 8 i~~~G~~~~GKssl~~~l~~ 27 (186)
T 1mh1_A 8 CVVVGDGAVGKTCLLISYTT 27 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 34579999999999999975
No 478
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=71.70 E-value=1.2 Score=41.30 Aligned_cols=61 Identities=13% Similarity=0.215 Sum_probs=43.2
Q ss_pred HhhcccCccccc----CCeeeccCHHHHHHHHHH----HHh-ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHh
Q psy18009 44 AILKNISFTVPA----GKTLALLSGGEKQRVAIA----RTL-LKAPQIVLLDEATSALDTKTERNIQSALNRVC 108 (277)
Q Consensus 44 ~vL~~l~l~i~~----~~~v~~LSgGqrQrv~IA----ral-~~~p~ilILDEPTa~LD~~~~~~l~~~l~~l~ 108 (277)
.+|+.+++.-.+ ..++..+|++++|+++++ +++ ..++++ +|+|++|....+.+++.|.++.
T Consensus 283 ~~L~~l~~~~~p~ilV~NK~Dl~~~~~~~~~~~~~~l~~~l~~~~~~~----~~~SA~~g~gi~~L~~~I~~~l 352 (364)
T 2qtf_A 283 EILREIGVSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDV----IPISALKRTNLELLRDKIYQLA 352 (364)
T ss_dssp HHHHHHTCCSCCEEEEEECGGGCCSCHHHHHHHHHHHHHHHCSCEEEE----EECBTTTTBSHHHHHHHHHHHH
T ss_pred HHHHHhCcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHhcCCCCcE----EEEECCCCcCHHHHHHHHHHHh
Confidence 345555543223 445667898888888877 555 334444 8999999999999999998764
No 479
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=71.67 E-value=1.6 Score=37.00 Aligned_cols=19 Identities=37% Similarity=0.428 Sum_probs=16.3
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+++.|...
T Consensus 21 l~G~~GsGKsT~a~~La~~ 39 (233)
T 1ak2_A 21 LLGPPGAGKGTQAPKLAKN 39 (233)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 3699999999999999743
No 480
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=71.54 E-value=1.5 Score=34.71 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=18.1
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.+.+-
T Consensus 20 ki~v~G~~~~GKSsl~~~l~~~ 41 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTIQFFQK 41 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3445799999999999999854
No 481
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=71.45 E-value=1.6 Score=36.47 Aligned_cols=19 Identities=37% Similarity=0.517 Sum_probs=16.3
Q ss_pred hcCCCCCchhHHHHHHhcc
Q psy18009 149 QVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl 167 (277)
..|..||||||+.+.|...
T Consensus 17 ltG~~GSGKSTva~~L~~~ 35 (192)
T 2grj_A 17 VTGKIGTGKSTVCEILKNK 35 (192)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4799999999999999743
No 482
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=71.41 E-value=0.02 Score=48.26 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=24.0
Q ss_pred ccCHHHHHHHHHH-HHhccCCCEEEEecCC
Q psy18009 61 LLSGGEKQRVAIA-RTLLKAPQIVLLDEAT 89 (277)
Q Consensus 61 ~LSgGqrQrv~IA-ral~~~p~ilILDEPT 89 (277)
.+|+||+|+++++ ++++.++.++++|||.
T Consensus 111 ~~~~g~~~~v~~~~~~~i~eg~~~l~de~~ 140 (208)
T 3c8u_A 111 DIAIAGAAEVGPECRVAIIEGNYLLFDAPG 140 (208)
T ss_dssp TEEEEEEEEECTTCCEEEEEESSTTBCSTT
T ss_pred cCCCCCceEEcCCCcEEEECCceeccCCch
Confidence 4799999999987 7888888888888874
No 483
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=71.35 E-value=1.4 Score=35.48 Aligned_cols=21 Identities=38% Similarity=0.414 Sum_probs=18.3
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|..|+|||+|++.+.+..
T Consensus 25 ~v~G~~~~GKSsli~~l~~~~ 45 (190)
T 2h57_A 25 LCLGLDNSGKTTIINKLKPSN 45 (190)
T ss_dssp EEEECTTSSHHHHHHHTSCGG
T ss_pred EEECCCCCCHHHHHHHHhcCC
Confidence 347999999999999998865
No 484
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=71.27 E-value=1.7 Score=34.83 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=18.3
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||+|++.+.+-.
T Consensus 20 i~v~G~~~~GKSsl~~~l~~~~ 41 (199)
T 4bas_A 20 VVMCGLDNSGKTTIINQVKPAQ 41 (199)
T ss_dssp EEEECCTTSCHHHHHHHHSCCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 3457999999999999998743
No 485
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=71.26 E-value=1.6 Score=35.00 Aligned_cols=22 Identities=36% Similarity=0.510 Sum_probs=18.4
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||||++.|.+-
T Consensus 18 ki~v~G~~~~GKSsli~~l~~~ 39 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFADD 39 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 3445799999999999999874
No 486
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=71.18 E-value=1.6 Score=35.08 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=18.2
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.+.+-.
T Consensus 25 i~vvG~~~~GKSsli~~l~~~~ 46 (189)
T 2gf9_A 25 LLLIGNSSVGKTSFLFRYADDS 46 (189)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 3457999999999999998653
No 487
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=71.07 E-value=1.4 Score=35.37 Aligned_cols=20 Identities=25% Similarity=0.592 Sum_probs=17.3
Q ss_pred ehhcCCCCCchhHHHHHHhc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFR 166 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~G 166 (277)
+..+|..|+|||||++.|.+
T Consensus 11 i~vvG~~~~GKSsli~~l~~ 30 (199)
T 2gf0_A 11 VVVFGAGGVGKSSLVLRFVK 30 (199)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHc
Confidence 34579999999999999986
No 488
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=70.96 E-value=1.3 Score=34.94 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=17.2
Q ss_pred hcCCCCCchhHHHHHHhccc
Q psy18009 149 QVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 149 ~~G~~GsGkttL~~~l~Gl~ 168 (277)
..|+.|+|||++++.+....
T Consensus 48 l~G~~G~GKT~la~~~~~~~ 67 (187)
T 2p65_A 48 LLGDPGVGKTAIVEGLAIKI 67 (187)
T ss_dssp EESCGGGCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 37999999999999997654
No 489
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=70.75 E-value=1.6 Score=35.00 Aligned_cols=22 Identities=18% Similarity=0.333 Sum_probs=17.9
Q ss_pred eehhcCCCCCchhHHHHHHhcc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl 167 (277)
.+..+|..|+|||+|++.+.+-
T Consensus 22 ki~v~G~~~~GKSsli~~l~~~ 43 (189)
T 1z06_A 22 KIIVIGDSNVGKTCLTYRFCAG 43 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3445799999999999999753
No 490
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=70.75 E-value=0.36 Score=45.92 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=31.5
Q ss_pred ccceEEEEeeeeeeecccceee--------------ceeEeecCCCcCC
Q psy18009 243 AQGAVEFRNVSFSYTPERAILK--------------NISFTVPAGKTLA 277 (277)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 277 (277)
..+.|+|+||+|.|..++..|. |++++|.+|++++
T Consensus 130 ~~~ri~Fe~ltp~yP~er~~Le~~~~~~~~tGiraID~~~pi~rGQr~~ 178 (422)
T 3ice_A 130 ARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGL 178 (422)
T ss_dssp HTTSCCTTTSCEESCCSBCCCCCTTCCTTHHHHHHHHHHSCCBTTCEEE
T ss_pred hcCCceeccccccCCCCccccccCCCCcccccceeeeeeeeecCCcEEE
Confidence 3577999999999999999999 9999999999763
No 491
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=70.52 E-value=1.9 Score=37.24 Aligned_cols=20 Identities=30% Similarity=0.436 Sum_probs=13.9
Q ss_pred cCCCCCchhHHHHHHhcccc
Q psy18009 150 VGQSGAGKSTIIRLLFRFYD 169 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl~~ 169 (277)
.|..||||||+++.|.....
T Consensus 31 eG~~GsGKsT~~~~l~~~l~ 50 (227)
T 3v9p_A 31 EGIDGAGKTTHLQWFCDRLQ 50 (227)
T ss_dssp ECCC---CHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHH
Confidence 69999999999999976543
No 492
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=70.46 E-value=1.9 Score=36.11 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.2
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||||++.|.+-
T Consensus 32 I~vvG~~~vGKSsLin~l~~~ 52 (228)
T 2qu8_A 32 IILSGAPNVGKSSFMNIVSRA 52 (228)
T ss_dssp EEEECSTTSSHHHHHHHHTTT
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 345799999999999999875
No 493
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=70.44 E-value=1.7 Score=39.55 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=18.5
Q ss_pred hhcCCCCCchhHHHHHHhccc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl~ 168 (277)
..+|.+|+|||||++.|.|..
T Consensus 171 ~lvG~~gvGKSTLin~L~~~~ 191 (357)
T 2e87_A 171 VIAGHPNVGKSTLLKALTTAK 191 (357)
T ss_dssp EEECSTTSSHHHHHHHHCSSC
T ss_pred EEECCCCCCHHHHHHHHhCCC
Confidence 347999999999999999865
No 494
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=70.35 E-value=2 Score=34.57 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=17.8
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||+|++.+.+-
T Consensus 24 i~v~G~~~~GKSsli~~l~~~ 44 (191)
T 2a5j_A 24 YIIIGDTGVGKSCLLLQFTDK 44 (191)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHhcC
Confidence 445799999999999999864
No 495
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=70.35 E-value=1.5 Score=35.09 Aligned_cols=21 Identities=24% Similarity=0.532 Sum_probs=17.7
Q ss_pred ehhcCCCCCchhHHHHHHhcc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl 167 (277)
+..+|..|+|||+|++.+.+-
T Consensus 10 i~v~G~~~vGKSsli~~l~~~ 30 (184)
T 1m7b_A 10 IVVVGDSQCGKTALLHVFAKD 30 (184)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 345799999999999999864
No 496
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=70.20 E-value=1.7 Score=34.77 Aligned_cols=20 Identities=35% Similarity=0.405 Sum_probs=17.0
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||+|++.+.+-
T Consensus 20 ~v~G~~~~GKssl~~~l~~~ 39 (187)
T 1zj6_A 20 IIVGLDNAGKTTILYQFSMN 39 (187)
T ss_dssp EEEESTTSSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHhcC
Confidence 34799999999999999853
No 497
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=70.14 E-value=2.3 Score=34.83 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=18.4
Q ss_pred ehhcCCCCCchhHHHHHHhccc
Q psy18009 147 LLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 147 ~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
+..+|..|+|||||++.|.+-.
T Consensus 28 i~vvG~~~~GKSsLi~~l~~~~ 49 (217)
T 2f7s_A 28 LLALGDSGVGKTTFLYRYTDNK 49 (217)
T ss_dssp EEEESCTTSSHHHHHHHHHCSC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 4457999999999999998753
No 498
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=70.02 E-value=1.6 Score=34.91 Aligned_cols=20 Identities=35% Similarity=0.405 Sum_probs=17.3
Q ss_pred hhcCCCCCchhHHHHHHhcc
Q psy18009 148 LQVGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 148 ~~~G~~GsGkttL~~~l~Gl 167 (277)
..+|..|+|||+|++.+.+-
T Consensus 25 ~v~G~~~~GKSsli~~l~~~ 44 (181)
T 2h17_A 25 IIVGLDNAGKTTILYQFSMN 44 (181)
T ss_dssp EEEEETTSSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHhcC
Confidence 44799999999999999864
No 499
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=70.01 E-value=1.5 Score=36.20 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=16.0
Q ss_pred cCCCCCchhHHHHHHhcc
Q psy18009 150 VGQSGAGKSTIIRLLFRF 167 (277)
Q Consensus 150 ~G~~GsGkttL~~~l~Gl 167 (277)
+|..|+|||||+..|.+.
T Consensus 36 ~G~~g~GKTTl~~~l~~~ 53 (221)
T 2wsm_A 36 MGAIGSGKTLLIERTIER 53 (221)
T ss_dssp EECTTSCHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHH
Confidence 689999999999999764
No 500
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=69.98 E-value=1.5 Score=35.38 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=18.6
Q ss_pred eehhcCCCCCchhHHHHHHhccc
Q psy18009 146 SLLQVGQSGAGKSTIIRLLFRFY 168 (277)
Q Consensus 146 ~~~~~G~~GsGkttL~~~l~Gl~ 168 (277)
.+..+|..|+|||+|++.+.+-.
T Consensus 25 ki~vvG~~~~GKSsli~~l~~~~ 47 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVCRFVQDH 47 (192)
T ss_dssp EEEEEECTTSSHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 34457999999999999997643
Done!