RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18009
(277 letters)
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 125 bits (316), Expect = 2e-35
Identities = 49/81 (60%), Positives = 68/81 (83%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR LL+ I++LDEATSALDT++ER IQ+AL+ + +RT++++AHRLS
Sbjct: 153 LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 212
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI ADEI+V+ G IVERG+
Sbjct: 213 TIEQADEIVVVEDGIIVERGT 233
Score = 65.6 bits (160), Expect = 3e-13
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNS 207
VG+SG+GKSTI L+ RFYD++ G I +D +++ + ASLR + +V Q+ LFN++
Sbjct: 47 VGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDT 104
Score = 50.6 bits (121), Expect = 4e-08
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 26 AQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLALL--SGGEK 67
A G +EFRNV+F+Y E L+NI+ +PAGKT+AL+ SG K
Sbjct: 10 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGK 54
Score = 48.3 bits (115), Expect = 3e-07
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 243 AQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLA 277
A G +EFRNV+F+Y E L+NI+ +PAGKT+A
Sbjct: 10 ATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVA 45
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 120 bits (303), Expect = 1e-33
Identities = 49/81 (60%), Positives = 63/81 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG+KQR++IAR L P I++LDEATSALD ++E IQ AL+ + RTT+IVAHRLS
Sbjct: 155 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLS 214
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI HAD+I+V+ G IVE G+
Sbjct: 215 TITHADKIVVIENGHIVETGT 235
Score = 75.6 bits (186), Expect = 9e-17
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+E+G V+ VG SG GKST+I L+ RFYDV SG I ID NIK SLR IG+V
Sbjct: 41 IEKGE-TVAF--VGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV 97
Query: 198 PQDTVLFNNSIK 209
QD +LF++++K
Sbjct: 98 QQDNILFSDTVK 109
Score = 55.6 bits (134), Expect = 8e-10
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 14 VIDIPQAPMLCVAQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLALL--SGGEKQRV 70
+ + A + + QG ++ +VSF Y E ILK+I+ ++ G+T+A + SGG K
Sbjct: 1 IKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKS-- 58
Query: 71 AIARTLLKAPQIVLLDEATS 90
TL+ I + TS
Sbjct: 59 ----TLINL--IPRFYDVTS 72
Score = 53.3 bits (128), Expect = 5e-09
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 231 VIDIPQAPMLCVAQGAVEFRNVSFSYTP-ERAILKNISFTVPAGKTLA 277
+ + A + + QG ++ +VSF Y E ILK+I+ ++ G+T+A
Sbjct: 1 IKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVA 48
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 113 bits (285), Expect = 5e-31
Identities = 39/81 (48%), Positives = 62/81 (76%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
+SGG++QR+AIAR L+ P+I++LDEAT++LD+++E +Q AL+ + RTT+++AHRLS
Sbjct: 140 ISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLS 199
Query: 122 TIIHADEILVMHAGEIVERGS 142
TI+ AD+I + G+I G
Sbjct: 200 TIVDADKIYFIEKGQITGSGK 220
Score = 75.3 bits (185), Expect = 1e-16
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+ S ++ G SG GKSTI LL RFY +G+I ID Q I +S + R IG V
Sbjct: 25 AQPNS-IIAF--AGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFV 81
Query: 198 PQDTVLFNNSIKAIQKNFVDMENMFDLLQETCDV 231
QD+ + +I+ ++ + + L + D+
Sbjct: 82 SQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDL 115
Score = 52.6 bits (126), Expect = 9e-09
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLDE 87
+ R+V F+Y IL++ISF +A SGG K T+ + +
Sbjct: 2 LSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGK------STIFSL--LERFYQ 53
Query: 88 ATS 90
T+
Sbjct: 54 PTA 56
Score = 48.7 bits (116), Expect = 1e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
+ R+V F+Y IL++ISF +A
Sbjct: 2 LSARHVDFAYDDSEQILRDISFEAQPNSIIA 32
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 111 bits (278), Expect = 4e-30
Identities = 44/81 (54%), Positives = 63/81 (77%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
LSGG++QR+AIAR L+ P+I++ DEATSALD ++E I ++++C RT II+AHRLS
Sbjct: 140 LSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLS 199
Query: 122 TIIHADEILVMHAGEIVERGS 142
T+ +AD I+VM G+IVE+G
Sbjct: 200 TVKNADRIIVMEKGKIVEQGK 220
Score = 71.5 bits (175), Expect = 2e-15
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+SG+GKST+ +L+ RFY E+G + ID ++ LR+ +GVV QD VL N SI
Sbjct: 35 VGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII 94
Score = 48.4 bits (115), Expect = 2e-07
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 30 VEFRNVSFSYTP-ERAILKNISFTVPAGKTLALL--SGGEK 67
+ FRN+ F Y P IL NI+ ++ G+ + ++ SG K
Sbjct: 2 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGK 42
Score = 46.1 bits (109), Expect = 1e-06
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 247 VEFRNVSFSYTP-ERAILKNISFTVPAGKTLA 277
+ FRN+ F Y P IL NI+ ++ G+ +
Sbjct: 2 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIG 33
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 108 bits (270), Expect = 2e-28
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI-QSALNRVCASRTTIIVAHRL 120
LSGG++ R+++AR + K + LLD LD TE + +S + ++ A++T I+V ++
Sbjct: 159 LSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKM 218
Query: 121 STIIHADEILVMHAGEIVERGS 142
+ AD+IL++H G G+
Sbjct: 219 EHLRKADKILILHQGSSYFYGT 240
Score = 61.9 bits (150), Expect = 7e-12
Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 16/72 (22%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+E+G +++ G +G+GK++++ L+ + G I + +
Sbjct: 59 IEKGE-MLAI--TGSTGSGKTSLLMLILGELEASEGIIKHSGR-------------VSFC 102
Query: 198 PQDTVLFNNSIK 209
Q + + +IK
Sbjct: 103 SQFSWIMPGTIK 114
Score = 44.9 bits (106), Expect = 4e-06
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 27 QGAVEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVL 84
+ V F ++ P +LKNI+ + G+ LA+ +G K +LL I+
Sbjct: 36 ENNVSFSHLCLVGNP---VLKNINLNIEKGEMLAITGSTGSGKT------SLLML--ILG 84
Query: 85 LDEATS 90
EA+
Sbjct: 85 ELEASE 90
Score = 41.8 bits (98), Expect = 4e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 244 QGAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
+ V F ++ P +LKNI+ + G+ LA
Sbjct: 36 ENNVSFSHLCLVGNP---VLKNINLNIEKGEMLA 66
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 104 bits (262), Expect = 1e-27
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCA--SRTTIIVAHR 119
LSGG++Q VA+AR L++ P +++LD+ATSALD ++ ++ L SR+ +++
Sbjct: 152 LSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQH 211
Query: 120 LSTIIHADEILVMHAGEIVERGS 142
LS + AD IL + G I E G+
Sbjct: 212 LSLVEQADHILFLEGGAIREGGT 234
Score = 76.9 bits (189), Expect = 3e-17
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG +G+GKST+ LL Y G + +D + + L + + V Q+ +F S++
Sbjct: 46 VGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQ 105
Score = 51.8 bits (124), Expect = 2e-08
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 27 QGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLALL--SGGEK 67
+G V+F++VSF+Y P+ +L+ ++FT+ G+ AL+ +G K
Sbjct: 9 EGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGK 53
Score = 49.5 bits (118), Expect = 8e-08
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 244 QGAVEFRNVSFSY--TPERAILKNISFTVPAGKTLA 277
+G V+F++VSF+Y P+ +L+ ++FT+ G+ A
Sbjct: 9 EGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTA 44
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 93.0 bits (231), Expect = 3e-23
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR--TTIIVAHR 119
LSGG++QRVAIAR L P I+L D+ T ALD+KT I L ++ T ++V H
Sbjct: 146 LSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD 205
Query: 120 LSTIIHADEILVMHAGEIVERGSL 143
++ + I+ + GE+ L
Sbjct: 206 INVARFGERIIYLKDGEVEREEKL 229
Score = 53.3 bits (128), Expect = 4e-09
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQA---- 193
++ G FVS+ +G SG+GKST++ ++ G+++IDN + L +
Sbjct: 28 IKEGE-FVSI--MGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDK 84
Query: 194 IGVVPQDTVLFNN 206
IG V Q L
Sbjct: 85 IGFVFQQFNLIPL 97
Score = 35.2 bits (81), Expect = 0.006
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 13/66 (19%)
Query: 30 VEFRNVSFSY---TPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVL 84
++ +NV+ +Y LKN++ + G+ ++++ SG K T+L
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKS------TMLNII--GC 53
Query: 85 LDEATS 90
LD+ T
Sbjct: 54 LDKPTE 59
Score = 31.3 bits (71), Expect = 0.094
Identities = 7/34 (20%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 247 VEFRNVSFSY---TPERAILKNISFTVPAGKTLA 277
++ +NV+ +Y LKN++ + G+ ++
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVS 35
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 79.8 bits (197), Expect = 2e-18
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR--TTIIVAHR 119
LSGG++QRVA+AR ++ P ++L+DE S LD K +++ + ++ TTI V H
Sbjct: 137 LSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHD 196
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
+ D I VM+ G++++ GS
Sbjct: 197 QVEAMTMGDRIAVMNRGQLLQIGS 220
Score = 52.9 bits (127), Expect = 7e-09
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
++ G F+ L +G SG GK+T +R++ + G I+ ++++ + + I +V
Sbjct: 29 IKDGE-FLVL--LGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK--DRNISMV 83
Query: 198 PQDTVLFNN 206
Q ++ +
Sbjct: 84 FQSYAVWPH 92
Score = 37.8 bits (88), Expect = 6e-04
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Query: 29 AVEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLD 86
V+ N++ + + ++ T+ G+ L LL SG K T L+ I L+
Sbjct: 6 EVKLENLTKRF-GNFTAVNKLNLTIKDGEFLVLLGPSGCGKT------TTLRM--IAGLE 56
Query: 87 EATS 90
E T
Sbjct: 57 EPTE 60
Score = 32.8 bits (75), Expect = 0.031
Identities = 5/32 (15%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 246 AVEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
V+ N++ + + ++ T+ G+ L
Sbjct: 6 EVKLENLTKRF-GNFTAVNKLNLTIKDGEFLV 36
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 78.1 bits (192), Expect = 1e-17
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 102
IL+ + + + LSGG+ + V I R L+ P+++++DE + + +I +
Sbjct: 132 FKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFN 191
Query: 103 ALNRVCASRTTII-VAHRLSTIIH-ADEILVMHAGEIVERGS 142
+ + A T + + HRL +++ D + VM G+I+ G
Sbjct: 192 HVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGR 233
Score = 47.7 bits (113), Expect = 4e-07
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASL-RQAIGV 196
V +G + +G +G+GKST+I ++ F + G ++ +N++I A L I
Sbjct: 27 VNKGD-VTLI--IGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVR 83
Query: 197 VPQDTVLFNN 206
Q
Sbjct: 84 TFQTPQPLKE 93
Score = 34.6 bits (79), Expect = 0.007
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLDE 87
+ N+ + E L +S +V G ++ +G K TL+ I +
Sbjct: 5 LRTENIVKYF-GEFKALDGVSISVNKGDVTLIIGPNGSGKS------TLINV--ITGFLK 55
Query: 88 ATS 90
A
Sbjct: 56 ADE 58
Score = 30.7 bits (69), Expect = 0.17
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
+ N+ + E L +S +V G
Sbjct: 5 LRTENIVKYF-GEFKALDGVSISVNKGDVTL 34
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 78.1 bits (192), Expect = 1e-17
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR--TTIIVAHR 119
LSGG++QRVA+ R +++ PQ+ L+DE S LD K +++ L ++ TTI V H
Sbjct: 140 LSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHD 199
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
+ D I VM+ G + + GS
Sbjct: 200 QVEAMTMGDRIAVMNRGVLQQVGS 223
Score = 43.8 bits (103), Expect = 7e-06
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQA---- 193
V+ G F+ L +G SG GK+T +R++ + G I+I ++ + +
Sbjct: 26 VKDGE-FMIL--LGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRD 82
Query: 194 IGVVPQDTVLFNNSIKAIQKNFVDM 218
I +V Q L+ + F
Sbjct: 83 IAMVFQSYALYPHMTVYDNIAFPLK 107
Score = 37.6 bits (87), Expect = 9e-04
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 29 AVEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLD 86
V +V + A ++ +S V G+ + LL SG K T L+ I L+
Sbjct: 3 GVRLVDVWKVFGEVTA-VREMSLEVKDGEFMILLGPSGCGKT------TTLRM--IAGLE 53
Query: 87 EATS 90
E +
Sbjct: 54 EPSR 57
Score = 33.4 bits (76), Expect = 0.022
Identities = 6/32 (18%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 246 AVEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
V +V + A ++ +S V G+ +
Sbjct: 3 GVRLVDVWKVFGEVTA-VREMSLEVKDGEFMI 33
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 77.6 bits (191), Expect = 1e-17
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS--RTTIIVAHR 119
LSGG+KQRVAIAR L P+++L DEATSALD T R+I L + T +++ H
Sbjct: 141 LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHE 200
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
+ + D + V+ GE++E+ +
Sbjct: 201 MDVVKRICDCVAVISNGELIEQDT 224
Score = 52.6 bits (126), Expect = 7e-09
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS---QASLRQAI 194
V G + +G SGAGKST+IR + G + +D Q + T+S R+ I
Sbjct: 28 VPAGQ-IYGV--IGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQI 84
Query: 195 GVVPQDTVLFNN 206
G++ Q L ++
Sbjct: 85 GMIFQHFNLLSS 96
Score = 36.4 bits (84), Expect = 0.002
Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 8/119 (6%)
Query: 30 VEFRNVSFSY---TPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAP---Q 81
++ N++ + T L N+S VPAG+ ++ SG K + LL+ P
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 82 IVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVER 140
+++ + + L + + + + + E+ E+ R
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRR 120
Score = 31.4 bits (71), Expect = 0.089
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 247 VEFRNVSFSY---TPERAILKNISFTVPAGKTLA 277
++ N++ + T L N+S VPAG+
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYG 35
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 77.3 bits (190), Expect = 2e-17
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 43 RAILKNISFTVPAGKTLALLSGGEKQRVAIARTLLK-------APQIVLLDEATSALDTK 95
+ ++ G++ LSGGE QRV +A +L+ A Q++LLDE ++LD
Sbjct: 107 NDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVA 166
Query: 96 TERNIQSALNRVCASRTTII-VAHRLSTII-HADEILVMHAGEIVERGS 142
+ + L+ +C I+ +H L+ + HA ++ G+++ G
Sbjct: 167 QQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGR 215
Score = 52.2 bits (125), Expect = 1e-08
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
V G + L VG +GAGKST++ + G I Q ++ S L +
Sbjct: 22 VRAGE-ILHL--VGPNGAGKSTLLARMAGMTS-GKGSIQFAGQPLEAWSATKLALHRAYL 77
Query: 198 PQ-DTVLFNNSI 208
Q T F +
Sbjct: 78 SQQQTPPFATPV 89
Score = 33.8 bits (77), Expect = 0.014
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 13/52 (25%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKA 79
++ ++V+ S L +S V AG+ L L+ +G K TLL
Sbjct: 4 MQLQDVAEST-----RLGPLSGEVRAGEILHLVGPNGAGKS------TLLAR 44
Score = 30.7 bits (69), Expect = 0.13
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
++ ++V+ S L +S V AG+ L
Sbjct: 4 MQLQDVAEST-----RLGPLSGEVRAGEILH 29
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 76.1 bits (187), Expect = 4e-17
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII-VAHRL 120
LSGGE+Q +AI R L+ P+++++DE + L + + ++ TTI+ V
Sbjct: 140 LSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNA 199
Query: 121 STIIH-ADEILVMHAGEIVERGS 142
+ A V+ G+IV G
Sbjct: 200 LGALKVAHYGYVLETGQIVLEGK 222
Score = 35.7 bits (82), Expect = 0.004
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS-QASLRQAIGV 196
V RG V+L+ G +GAGK+T + + + G I + Q+I R I +
Sbjct: 29 VPRGQ-IVTLI--GANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIAL 85
Query: 197 VPQDTVLFNN 206
VP+ +F
Sbjct: 86 VPEGRRIFPE 95
Score = 33.3 bits (76), Expect = 0.019
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 31 EFRNVSFSYTPERAILKNISFTVPAGKTLALL 62
E +++ Y +K I VP G+ + L+
Sbjct: 8 EVQSLHVYY-GAIHAIKGIDLKVPRGQIVTLI 38
Score = 30.7 bits (69), Expect = 0.15
Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 248 EFRNVSFSYTPERAILKNISFTVPAGKTLA 277
E +++ Y +K I VP G+ +
Sbjct: 8 EVQSLHVYY-GAIHAIKGIDLKVPRGQIVT 36
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 76.0 bits (187), Expect = 6e-17
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII-VAHRL 120
LSGG++QRV+IAR L P ++L DE TSALD + + + ++ T++ V H +
Sbjct: 150 LSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEM 209
Query: 121 STIIH-ADEILVMHAGEIVERGS 142
H + ++ +H G+I E G
Sbjct: 210 GFARHVSSHVIFLHQGKIEEEGD 232
Score = 56.0 bits (135), Expect = 7e-10
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 16/82 (19%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS----------- 186
G +S+ +G SG+GKST +R + G I ++ QNI V
Sbjct: 25 ARAGD-VISI--IGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADK 81
Query: 187 --QASLRQAIGVVPQDTVLFNN 206
LR + +V Q L+++
Sbjct: 82 NQLRLLRTRLTMVFQHFNLWSH 103
Score = 39.1 bits (91), Expect = 3e-04
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 11/63 (17%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLDE 87
+ ++ Y +LK +S AG ++++ SG K T L+ I L++
Sbjct: 3 LHVIDLHKRY-GGHEVLKGVSLQARAGDVISIIGSSGSGKS------TFLRC--INFLEK 53
Query: 88 ATS 90
+
Sbjct: 54 PSE 56
Score = 32.9 bits (75), Expect = 0.033
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
+ ++ Y +LK +S AG ++
Sbjct: 3 LHVIDLHKRY-GGHEVLKGVSLQARAGDVIS 32
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 69.2 bits (169), Expect = 7e-15
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 57 KTLALLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIV 116
K L LS G +RV +A TLL +I +LD+ A+D ++ + ++ + + +I+
Sbjct: 121 KKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVII 180
Query: 117 AHRLSTIIHADEILVMH 133
+ R + + D +H
Sbjct: 181 SSR-EELSYCDVNENLH 196
Score = 48.4 bits (115), Expect = 2e-07
Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+E+G+ V+ G +G GK+T+++ + + G+I + I ++ I +
Sbjct: 24 IEKGN-VVNF--HGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT-----KVKGKIFFL 75
Query: 198 PQDTVLFNN 206
P++ ++
Sbjct: 76 PEEIIVPRK 84
Score = 42.2 bits (99), Expect = 2e-05
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 10/51 (19%)
Query: 31 EFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKA 79
E R++S Y ++ +L+ I+ T+ G + +G K TLLK
Sbjct: 4 EIRDLSVGY--DKPVLERITMTIEKGNVVNFHGPNGIGKT------TLLKT 46
Score = 38.4 bits (89), Expect = 4e-04
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 248 EFRNVSFSYTPERAILKNISFTVPAGKTLA 277
E R++S Y ++ +L+ I+ T+ G +
Sbjct: 4 EIRDLSVGY--DKPVLERITMTIEKGNVVN 31
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 68.5 bits (167), Expect = 2e-14
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTII-VAHRL 120
S G +++ IAR L+ P++ +LDE TS LD R ++ L + TI+ +H +
Sbjct: 134 YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNM 193
Query: 121 STIIH-ADEILVMHAGEIVERGS 142
+ D I ++H G IVE G+
Sbjct: 194 LEVEFLCDRIALIHNGTIVETGT 216
Score = 48.1 bits (114), Expect = 2e-07
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+E G L+ G +GAGK+T +R++ SG + + +N+ +R+ I +
Sbjct: 25 IEEGE-IFGLI--GPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHE-VRKLISYL 80
Query: 198 PQDTVLFNN 206
P++ + N
Sbjct: 81 PEEAGAYRN 89
Score = 40.4 bits (94), Expect = 9e-05
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 28 GAVEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLL 85
GAV +++ ++ ILK ISF + G+ L+ +G K T L+ I L
Sbjct: 1 GAVVVKDLRKRI-GKKEILKGISFEIEEGEIFGLIGPNGAGKT------TTLRI--ISTL 51
Query: 86 DEATS 90
+ +S
Sbjct: 52 IKPSS 56
Score = 36.9 bits (85), Expect = 0.001
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 245 GAVEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
GAV +++ ++ ILK ISF + G+
Sbjct: 1 GAVVVKDLRKRI-GKKEILKGISFEIEEGEIFG 32
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 68.4 bits (167), Expect = 3e-14
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRV--CASRTTIIVAHR 119
LSGG++QRVAI RTL+ P + LLDE S LD ++ ++R+ RT I V H
Sbjct: 131 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHD 190
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
+ AD+I+V+ AG + + G
Sbjct: 191 QVEAMTLADKIVVLDAGRVAQVGK 214
Score = 47.3 bits (112), Expect = 5e-07
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
+ G FV VG SG GKST++R++ + SGD+FI + + A + +G+V
Sbjct: 23 IHEGE-FVVF--VGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPA--ERGVGMV 77
Query: 198 PQDTVLF 204
Q L+
Sbjct: 78 FQSYALY 84
Score = 39.5 bits (92), Expect = 2e-04
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLDE 87
V+ +NV+ ++ E + K+I+ + G+ + + SG K TLL+ I L+
Sbjct: 1 VQLQNVTKAW-GEVVVSKDINLDIHEGEFVVFVGPSGCGKS------TLLRM--IAGLET 51
Query: 88 ATS 90
TS
Sbjct: 52 ITS 54
Score = 35.3 bits (81), Expect = 0.004
Identities = 7/31 (22%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
V+ +NV+ ++ E + K+I+ + G+ +
Sbjct: 1 VQLQNVTKAW-GEVVVSKDINLDIHEGEFVV 30
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 58.9 bits (142), Expect = 6e-11
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASR--TTIIVAHR 119
LSG ++QRVA+AR L+K P ++LLDE S LD + + ++ + V + T ++V+H
Sbjct: 141 LSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHD 200
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
+ I AD + V+ G++V+ G
Sbjct: 201 PADIFAIADRVGVLVKGKLVQVGK 224
Score = 48.5 bits (115), Expect = 2e-07
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLR---QAI 194
+E G + +G SGAGK+T +R++ +G+++ D++ + + + + + I
Sbjct: 28 IENGE-RFGI--LGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKI 84
Query: 195 GVVPQDTVL------FNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQ 244
G+V Q L F N + + E + ++E ++DI +
Sbjct: 85 GMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRE 140
Score = 38.9 bits (90), Expect = 3e-04
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 29 AVEFRNVSFSYTP-ERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLL 85
+ +NVS + + L N++ + G+ +L SG K T ++ I L
Sbjct: 3 RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKT------TFMRI--IAGL 54
Query: 86 DEATS 90
D ++
Sbjct: 55 DVPST 59
Score = 33.5 bits (76), Expect = 0.018
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 246 AVEFRNVSFSYTP-ERAILKNISFTVPAGKTLA 277
+ +NVS + + L N++ + G+
Sbjct: 3 RIIVKNVSKVFKKGKVVALDNVNINIENGERFG 35
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 58.1 bits (140), Expect = 1e-10
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 21 PMLCVAQGAVEFRNVSFSYTPERA--ILKNISFTVPAGKTLALLSGGEKQRVAIARTLLK 78
P + V + + P+R +++ + LSGGE+QRVA+AR L+
Sbjct: 85 PHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVT 144
Query: 79 APQIVLLDEATSALDTKTERNIQSALNRV--CASRTTIIVAHRLSTIIH-ADEILVMHAG 135
P+I+LLDE SALD +T+ N + L+ + T + + H + AD I V+ G
Sbjct: 145 NPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDG 204
Query: 136 EIVERGS 142
++++ G
Sbjct: 205 KLIQVGK 211
Score = 45.8 bits (108), Expect = 1e-06
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
VE G + + +G +GAGK+ + L+ F+ +SG I +D +++ +S + I V
Sbjct: 23 VESGE-YFVI--LGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE--KHDIAFV 77
Query: 198 PQDTVLFNN 206
Q+ LF +
Sbjct: 78 YQNYSLFPH 86
Score = 36.2 bits (83), Expect = 0.002
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 30 VEFRNVSFSYTPERAILKNISFTVPAGKTLALL--SGGEKQRVAIARTLLKAPQIVLLDE 87
+E ++S + + L N+S V +G+ +L +G K L+ I
Sbjct: 2 IEIESLSRKW--KNFSLDNLSLKVESGEYFVILGPTGAGKT------LFLEL--IAGFHV 51
Query: 88 ATS 90
S
Sbjct: 52 PDS 54
Score = 32.0 bits (72), Expect = 0.058
Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 247 VEFRNVSFSYTPERAILKNISFTVPAGKTLA 277
+E ++S + + L N+S V +G+
Sbjct: 2 IEIESLSRKW--KNFSLDNLSLKVESGEYFV 30
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 58.3 bits (139), Expect = 2e-10
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 64 GGEKQRV------AIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIV 116
GGE+ + A++ L +++LDE T LD + R + + + R I+V
Sbjct: 281 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILV 340
Query: 117 AHRLSTIIHADEILVM 132
+H AD ++ +
Sbjct: 341 SHDEELKDAADHVIRI 356
Score = 28.3 bits (61), Expect = 1.3
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 150 VGQSGAGKSTIIR-LLFRFYDVESGDIFIDNQNIK 183
+GQ+G+GKS+++ +L Y ++ K
Sbjct: 29 IGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTK 63
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 56.9 bits (137), Expect = 3e-10
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 138 VERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVV 197
E G + L +G +GAGKS + L+ + G++ ++ +I + R+ IG V
Sbjct: 20 FEMGRDYCVL--LGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPE--RRGIGFV 75
Query: 198 PQDTVLF 204
PQD LF
Sbjct: 76 PQDYALF 82
Score = 54.6 bits (131), Expect = 2e-09
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRV--CASRTTIIVAHR 119
LSGGE+QRVA+AR L+ P+++LLDE SA+D KT+ + L V + V H
Sbjct: 127 LSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHD 186
Query: 120 LSTIIH-ADEILVMHAGEIVERGS 142
L ADE+ VM G IVE+G
Sbjct: 187 LIEAAMLADEVAVMLNGRIVEKGK 210
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 56.7 bits (135), Expect = 4e-10
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 64 GGEKQRV------AIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIV 116
GGE+ + A++ L +++LDE T LD + R + + + R I+V
Sbjct: 204 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILV 263
Query: 117 AHRLSTIIHADEILVM------HAGEIV 138
+H AD ++ + E+V
Sbjct: 264 SHDEELKDAADHVIRISLENGSSKVEVV 291
Score = 30.1 bits (66), Expect = 0.25
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 150 VGQSGAGKSTIIRLLFR 166
+GQ+G+GKS+++ +
Sbjct: 29 IGQNGSGKSSLLDAILV 45
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 52.7 bits (125), Expect = 4e-09
Identities = 6/80 (7%), Positives = 17/80 (21%)
Query: 62 LSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVAHRLS 121
A +++++DE + + +
Sbjct: 82 ELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRD 141
Query: 122 TIIHADEILVMHAGEIVERG 141
EI + ++E
Sbjct: 142 VHPLVKEIRRLPGAVLIELT 161
Score = 48.8 bits (115), Expect = 9e-08
Identities = 7/92 (7%), Positives = 29/92 (31%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
G+ G GK+T+++ + + + + + + + I + + +
Sbjct: 6 TGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFT 65
Query: 210 AIQKNFVDMENMFDLLQETCDVIDIPQAPMLC 241
+ + N+ + +++
Sbjct: 66 SKKLVGSYGVNVQYFEELAIPILERAYREAKK 97
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 34.7 bits (78), Expect = 0.012
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 59 LALLSGGEKQRVAIARTL----LKAPQIVLLDEATSALDTKTERNIQSALNRVCASRT-T 113
+ LSGGEK A+A + +LDE +ALD + I + + R
Sbjct: 330 MEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQF 389
Query: 114 IIVAHRLSTIIHADEIL 130
I+++ + + +D ++
Sbjct: 390 IVISLKNTMFEKSDALV 406
Score = 25.8 bits (55), Expect = 6.6
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 150 VGQSGAGKSTII 161
+G +G+GKS ++
Sbjct: 31 IGPNGSGKSNMM 42
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 33.5 bits (75), Expect = 0.015
Identities = 10/97 (10%), Positives = 20/97 (20%), Gaps = 9/97 (9%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
G G GK+T+I + + + + +
Sbjct: 7 TGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGL 66
Query: 210 AIQ---------KNFVDMENMFDLLQETCDVIDIPQA 237
+ VD+ + L D
Sbjct: 67 EPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSG 103
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 32.9 bits (74), Expect = 0.019
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 147 LLQVGQSGAGKSTIIRLLFRF--YDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF 204
++ VG GAGKST I+ Y + D Q + QA+LRQ VV +T
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTNPD 76
Query: 205 NNSIKAIQK 213
S +
Sbjct: 77 VPSRARYIQ 85
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 32.6 bits (73), Expect = 0.030
Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 4/42 (9%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVE----SGDIFIDNQNIKTVSQ 187
G G+GKSTI L V D +
Sbjct: 10 SGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDP 51
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 32.4 bits (72), Expect = 0.034
Identities = 7/33 (21%), Positives = 10/33 (30%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 182
G +GK I R L + + G
Sbjct: 12 TGYMNSGKDAIARALQVTLNQQGGRSVSLLLGD 44
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 31.4 bits (70), Expect = 0.063
Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 7/126 (5%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKTVSQASLRQAI--GVVPQDTVLF 204
+G AGK T + + + + +GD+ + + + G + D ++
Sbjct: 6 LGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVI 65
Query: 205 NNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPERAILK 264
+ I + D N F L + + V +V +R +
Sbjct: 66 ALVKERIAQE--DCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVKD 123
Query: 265 NISFTV 270
+ TV
Sbjct: 124 DQEETV 129
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 31.2 bits (69), Expect = 0.083
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 9/37 (24%)
Query: 139 ERGSLFVSLLQVGQSGAGKSTIIRLL-----FRFYDV 170
E+ ++F+ VG GAGKSTI R L FYD
Sbjct: 1 EKRNIFL----VGPMGAGKSTIGRQLAQQLNMEFYDS 33
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.9 bits (66), Expect = 0.18
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Query: 150 VGQSGAGKSTIIRLL-----FRFYDV 170
+G G+GKST+ R L F D
Sbjct: 6 IGFMGSGKSTLARALAKDLDLVFLDS 31
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.1 bits (66), Expect = 0.18
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 183
+L +G G GKS + R+ D + +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRS 40
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.0 bits (66), Expect = 0.20
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 150 VGQSGAGKSTIIRLLFRFYD---VESGDIFID 178
G +G GKST + L D GDI
Sbjct: 8 TGPAGVGKSTTCKRLAAQLDNSAYIEGDIINH 39
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 29.6 bits (65), Expect = 0.23
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 5/27 (18%)
Query: 150 VGQSGAGKSTIIRLL-----FRFYDVE 171
VG G+GKSTI R L D +
Sbjct: 7 VGLPGSGKSTIGRRLAKALGVGLLDTD 33
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 29.6 bits (65), Expect = 0.27
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 182
G SGAGK+T+ L + + + +
Sbjct: 25 TGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDN 57
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 29.6 bits (65), Expect = 0.33
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 150 VGQSGAGKSTIIRLLFRFYD 169
G S GKST++R L
Sbjct: 8 SGPSAVGKSTVVRCLRERIP 27
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 29.2 bits (64), Expect = 0.33
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179
G S AGKS I+R L +D+
Sbjct: 9 NGGSSAGKSGIVRCLQSVLPEPWLAFGVDS 38
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 29.6 bits (65), Expect = 0.34
Identities = 8/29 (27%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 151 GQSGAGKSTIIRLL---FRFYDVESGDIF 176
G + +GKST+ +++ F F +++G ++
Sbjct: 10 GPASSGKSTVAKIIAKDFGFTYLDTGAMY 38
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 29.6 bits (65), Expect = 0.35
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 151 GQSGAGKSTIIRLL---FRFYDVESGDIF 176
G SGAGK T+ + + +++ ++SG I+
Sbjct: 10 GPSGAGKGTLCKAMAEALQWHLLDSGAIY 38
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 29.1 bits (64), Expect = 0.36
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 184
+G GAGK T + + + +GD+F T
Sbjct: 6 MGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGT 43
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 29.2 bits (64), Expect = 0.40
Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 15/122 (12%)
Query: 145 VSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFID---------------NQNIKTVSQAS 189
V LL +G +GKSTI++ + ++ +G + ++ +
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHC 62
Query: 190 LRQAIGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEF 249
++ + + + A + M L C+ ++ F
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLF 122
Query: 250 RN 251
Sbjct: 123 EE 124
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 28.9 bits (63), Expect = 0.43
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 150 VGQSGAGKSTIIRLLFR 166
+G G+GKST R
Sbjct: 8 IGCPGSGKSTWAREFIA 24
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 28.8 bits (63), Expect = 0.44
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 150 VGQSGAGKSTIIRLL-----FRFYDVESGDIFIDNQNI 182
VG G G +T+ R L + F D + +
Sbjct: 8 VGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTV 45
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 28.9 bits (63), Expect = 0.44
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 142 SLFVSLLQVGQSGAGKSTIIRLLFR 166
S FV++ VG+ GKST++ L
Sbjct: 5 SGFVAI--VGKPNVGKSTLLNNLLG 27
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 28.8 bits (63), Expect = 0.51
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 150 VGQSGAGKSTIIRLLFRFYD 169
G SG GKST+++ LF Y
Sbjct: 7 SGPSGTGKSTLLKKLFAEYP 26
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.7 bits (63), Expect = 0.55
Identities = 5/17 (29%), Positives = 7/17 (41%)
Query: 150 VGQSGAGKSTIIRLLFR 166
+G G G+ I L
Sbjct: 9 LGAHGVGRRHIKNTLIT 25
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 29.2 bits (64), Expect = 0.55
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 57 KTLALLSGGEKQRVAI----ARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCASRT 112
K + +SGGEK A+ A K L DE + LD + + +
Sbjct: 220 KRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQ 279
Query: 113 TIIVAHRLSTIIHADEI 129
I++ R + +AD+I
Sbjct: 280 FIVITLRDVMMANADKI 296
Score = 25.3 bits (54), Expect = 8.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 150 VGQSGAGKSTII 161
VG +G+GKS I
Sbjct: 32 VGANGSGKSNIG 43
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 28.5 bits (62), Expect = 0.59
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 150 VGQSGAGKSTIIRLLFR 166
+G SG+GKS + +
Sbjct: 12 MGVSGSGKSAVASEVAH 28
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 28.4 bits (62), Expect = 0.73
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 143 LFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFID 178
L ++L G G GK+T+ + L ++ +I+
Sbjct: 3 LLPNILLTGTPGVGKTTLGKELASKSGLK----YIN 34
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 28.3 bits (62), Expect = 0.75
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
LL +G SG GK+T + R ++ + + K V + V
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 67
Query: 206 NSIKAIQKNFVDMENMF 222
A Q+ F + F
Sbjct: 68 LWDTAGQERFRSLTTAF 84
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.3 bits (62), Expect = 0.79
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 150 VGQSGAGKSTIIRLLFR 166
SGAGKS++I+ L +
Sbjct: 8 SAPSGAGKSSLIQALLK 24
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 28.1 bits (61), Expect = 0.79
Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF---NN 206
VG AGKS+++ + R + + F + + + D +
Sbjct: 7 VGYPNAGKSSLLAAMTRAHPKIAPYPFTTLS--PNLGVVEVSEEERFTLADIPGIIEGAS 64
Query: 207 SIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCV 242
K + F+ +L D D P + +
Sbjct: 65 EGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETL 100
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.0 bits (61), Expect = 0.87
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 150 VGQSGAGKSTIIRLLFR 166
G SGAGKST+++ LF+
Sbjct: 6 SGPSGAGKSTLLKKLFQ 22
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 28.0 bits (61), Expect = 0.97
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 184
+G GAGK T L F + +GD+ +
Sbjct: 9 LGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGS 46
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 1.1
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 184
+G GAGK T L F + +GD+ T
Sbjct: 8 IGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGT 45
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 28.2 bits (61), Expect = 1.1
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 137 IVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179
+ G + +G+ G GK+ +R L+ Y ++ F+
Sbjct: 36 LRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYI 78
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.7 bits (60), Expect = 1.1
Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 150 VGQSGAGKSTIIRLLFRFYDV----ESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFN 205
+G +GKS ++ L ++ E G F+ + + +
Sbjct: 13 LGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRYID 72
Query: 206 NSIKAIQKNFVDMENMFDLL 225
+++ K +
Sbjct: 73 YAVRHSHKIAFIDTDFITTQ 92
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 27.5 bits (60), Expect = 1.2
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 184
+G GAGK T + + + +GD+F T
Sbjct: 6 MGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGT 43
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.1 bits (61), Expect = 1.2
Identities = 13/106 (12%), Positives = 28/106 (26%), Gaps = 2/106 (1%)
Query: 151 GQSGAGKSTIIRLLF-RFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
G AGKST + +L D E + +Q + + +
Sbjct: 9 GNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYE 68
Query: 210 AIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFS 255
++ + L + + + + F +S
Sbjct: 69 KPERWSFTFQTYA-CLSRIRAQLASLNGKLKDAEKPVLFFERSVYS 113
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 28.0 bits (61), Expect = 1.2
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 7/34 (20%)
Query: 150 VGQSGAGKSTIIRLLFRFY-------DVESGDIF 176
VG GK+ I + L R+ + +
Sbjct: 8 VGLPARGKTYISKKLTRYLNFIGVPTREFNVGQY 41
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 27.6 bits (60), Expect = 1.3
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFI 177
G G G +T +L E + +
Sbjct: 7 TGVPGVGSTTSSQLAMDNLRKEGVNYKM 34
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 27.7 bits (60), Expect = 1.3
Identities = 8/44 (18%), Positives = 13/44 (29%), Gaps = 8/44 (18%)
Query: 150 VGQSGAGKSTIIRLL--------FRFYDVESGDIFIDNQNIKTV 185
G G GKST++ + + GD +
Sbjct: 7 TGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGY 50
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 27.8 bits (61), Expect = 1.4
Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNS-I 208
G SG GKS+++ + + ++ Q + + + + +
Sbjct: 101 AGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHT---TTTAQLLKFDFGGYVVDTPGF 157
Query: 209 KAIQKNFVDMENMFDLLQETCD 230
++ N ++ E + +E D
Sbjct: 158 ANLEINDIEPEELKHYFKEFGD 179
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 28.1 bits (62), Expect = 1.5
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAI 194
G+SGAGK+ + + + + + ++ + SL I
Sbjct: 128 GESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQI 171
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.5 bits (60), Expect = 1.5
Identities = 16/137 (11%), Positives = 47/137 (34%), Gaps = 29/137 (21%)
Query: 147 LLQVGQSGAGKSTIIRLL-----------FRFYDVESGDIFIDNQNIK------------ 183
++ +G +G GK+ ++R D + I+ + +K
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERF 67
Query: 184 -TVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENM-----FDLLQETCDVIDIPQA 237
+++Q+ R A ++ + S + + + ++E +L + +
Sbjct: 68 RSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERRE 127
Query: 238 PMLCVAQGAVEFRNVSF 254
A+ E +++ +
Sbjct: 128 VSQQRAEEFSEAQDMYY 144
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 27.3 bits (59), Expect = 1.6
Identities = 8/89 (8%), Positives = 24/89 (26%), Gaps = 6/89 (6%)
Query: 150 VGQSGAGKSTIIRLL------FRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVL 203
G G GK+++ ++ F+ +V + +
Sbjct: 11 TGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRLLDF 70
Query: 204 FNNSIKAIQKNFVDMENMFDLLQETCDVI 232
+ + + VD + + ++
Sbjct: 71 MEPIMVSRGNHVVDYHSSELFPERWFHMV 99
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 27.4 bits (59), Expect = 1.6
Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 144 FVSLLQVGQSGAGKSTIIRLLFR 166
F+++ VG+ GKST++ L
Sbjct: 7 FIAI--VGRPNVGKSTLLNKLLG 27
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 27.2 bits (59), Expect = 1.8
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 18/104 (17%)
Query: 141 GSLFVSLLQ-------------VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQ-NIKTVS 186
G++F S+ +G GAGK+T +L+R E N++T+S
Sbjct: 1 GNIFSSMFDKLWGSNKELRILILGLDGAGKTT---ILYRLQIGEVVTTKPTIGFNVETLS 57
Query: 187 QASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENMFDLLQETCD 230
+L+ + + T + + + + D +
Sbjct: 58 YKNLKLNVWDLGGQTS-IRPYWRCYYADTAAVIFVVDSTDKDRM 100
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 27.4 bits (59), Expect = 1.8
Identities = 8/49 (16%), Positives = 15/49 (30%)
Query: 136 EIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKT 184
+ G +LL G G +I L R+ + + +
Sbjct: 16 ASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 27.2 bits (59), Expect = 1.9
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQN 181
+G GAGK T + + + + +G++ D +
Sbjct: 7 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERK 41
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 1.9
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 142 SLF----VSLLQVGQSGAGKSTIIRLLFRFYDVESGDIF 176
+F + +L +G AGK+TI+ L V +
Sbjct: 6 KIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTV 44
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 26.9 bits (58), Expect = 2.0
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN 206
LL +G AGK+TI++ +F + I + + +
Sbjct: 5 LLMLGLDNAGKTTILK---KFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRS 61
Query: 207 SIKAIQKNFVDMENMFD 223
+ ++ + + D
Sbjct: 62 YWRNYFESTDGLIWVVD 78
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 26.9 bits (58), Expect = 2.0
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQ 180
++ VG AGK+TI+ V + N
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNV 51
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 26.8 bits (58), Expect = 2.1
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN 206
+G GAGK T L + +G++F N T ++ + N
Sbjct: 6 LGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTN 65
Query: 207 SIKAIQKNFVDMENMF 222
+ + N D N F
Sbjct: 66 ELVDDRLNNPDAANGF 81
>d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 415
Score = 27.4 bits (60), Expect = 2.2
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 11/98 (11%)
Query: 160 IIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDME 219
I+ R++ E G +D Q +K + + + V N++ + M
Sbjct: 115 ILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMV 174
Query: 220 -----------NMFDLLQETCDVIDIPQAPMLCVAQGA 246
+ L+ ++ P P L + GA
Sbjct: 175 GFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGA 212
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 27.4 bits (60), Expect = 2.3
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKA 210
G+SGAGK+ + R++ SG N K ++ + ++IG T +NS +
Sbjct: 101 GESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAK--TTRNDNSSRF 158
Query: 211 IQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSY 256
+ + + + ++ ++ V Q E F
Sbjct: 159 GKYIEIGFDKRYRIIG--ANMRTYLLEKSRVVFQAEEERNYHIFYQ 202
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 27.4 bits (60), Expect = 2.3
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNS 207
G+SGAGK+ + + +F S + + + I + S T+ +NS
Sbjct: 93 GESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNS 149
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 26.9 bits (58), Expect = 2.6
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQN 181
+G G+GK T + F + + +GD+ Q
Sbjct: 12 LGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQ 46
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 26.6 bits (57), Expect = 2.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 150 VGQSGAGKSTIIRLLFR 166
G+S GKST+I L
Sbjct: 6 AGRSNVGKSTLIYRLTG 22
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.3 bits (57), Expect = 2.9
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQN 181
+G G+GK T+ + F + SGD+ DN
Sbjct: 12 MGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNML 46
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 26.7 bits (58), Expect = 3.1
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 128 EILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDI 175
L+ G + + +++L +G+ G GKS+ + + V
Sbjct: 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPF 63
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.4 bits (57), Expect = 3.1
Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTV 185
+L +G S GK++ + R + + +KT+
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI 47
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 26.4 bits (57), Expect = 3.1
Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKTVSQASLRQAIGV-VPQDTVLFN 205
G +GK T L+ ++ + +GD+ + + ++ + +
Sbjct: 9 SGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVV 68
Query: 206 NSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEF 249
N +K + EN + L L +
Sbjct: 69 NMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFIL 112
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 26.6 bits (57), Expect = 3.1
Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Query: 150 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 209
VG+ GKST+ + I ++ + V + + ++
Sbjct: 14 VGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVE 73
Query: 210 AIQKNFVDMENMFDLLQETCDVI 232
+ D +++ DV+
Sbjct: 74 PRTVEKYSNYRVVDSIEK-ADVV 95
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 27.0 bits (59), Expect = 3.2
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAI 194
S+L G+SGAGK+ + + +++ + + Q +L I
Sbjct: 125 SILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 173
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 26.2 bits (56), Expect = 3.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 147 LLQVGQSGAGKSTIIRLL 164
+L +G GAGK+TI+ L
Sbjct: 8 ILILGLDGAGKTTILYRL 25
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 26.1 bits (57), Expect = 3.5
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 128 EILVMHAGEIVERGSLFVSLLQVGQSGAGKSTI-IRLLFRFYDVESGD 174
+ +H + G V +L G+SG GKS + L+ + + D
Sbjct: 2 TVAQIHGVLLEVFG---VGVLLTGRSGIGKSECALDLINKNHLFVGDD 46
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.2 bits (56), Expect = 3.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 147 LLQVGQSGAGKSTIIRLL 164
LL +G AGK+T++ +L
Sbjct: 3 LLFLGLDNAGKTTLLHML 20
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 26.3 bits (56), Expect = 3.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 150 VGQSGAGKSTIIRLLFR 166
VG+ GKST+ L +
Sbjct: 6 VGRPNVGKSTLFNKLVK 22
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 26.2 bits (56), Expect = 3.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 150 VGQSGAGKSTIIRLL 164
G+ AGKS+++ L
Sbjct: 7 AGRPNAGKSSLLNAL 21
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 26.3 bits (57), Expect = 3.7
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 151 GQSGAGKSTIIRLLFRFY 168
G S +GKST+ L
Sbjct: 31 GLSASGKSTLAVELEHQL 48
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.3 bits (56), Expect = 3.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDI 175
++ +G+ G GKST+ + +D D
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDC 34
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.2 bits (56), Expect = 3.9
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTV 185
+ +G GKS++ V+S D I+N K +
Sbjct: 7 IAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLI 45
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 26.2 bits (56), Expect = 4.0
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 147 LLQVGQSGAGKSTIIR 162
L+ +G AGK+T++
Sbjct: 16 LVFLGLDNAGKTTLLH 31
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 25.9 bits (56), Expect = 4.0
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTV 185
LL +G SG GK+ ++ R ++ + I+T+
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI 48
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 25.8 bits (55), Expect = 4.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 147 LLQVGQSGAGKSTIIRLL 164
L VG +GK+T + ++
Sbjct: 5 LTLVGLQYSGKTTFVNVI 22
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 26.0 bits (56), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTVS 186
+L +G+SG GKS+++ R +D E + +KT+S
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIS 50
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 26.0 bits (56), Expect = 4.6
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 150 VGQSGAGKSTIIRLL---------FRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQD 200
VG GKST++ ++ + F + ++ + ++ A L I Q
Sbjct: 7 VGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQG 66
Query: 201 TVLFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLC 241
L + ++ I++ V + + E D D
Sbjct: 67 VGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQE 107
>d1u0la1 b.40.4.5 (A:3-68) Probable GTPase EngC (YjeQ), N-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 66
Score = 24.4 bits (53), Expect = 4.6
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Query: 157 KSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLR-QAIGVVPQDTVLF 204
+ ++ VE + + I + R Q + + D V +
Sbjct: 4 RGIVVSFHSNMVTVEDEE---TGERILCKLRGKFRLQNLKIYVGDRVEY 49
>d1pn2a1 d.38.1.4 (A:4-151) 2-enoyl-coa hydratase domain of
multifunctional peroxisomal
hydratase-dehydrogenase-epimerase {Yeast (Candida
tropicalis) [TaxId: 5482]}
Length = 148
Score = 25.6 bits (56), Expect = 4.9
Identities = 10/61 (16%), Positives = 26/61 (42%)
Query: 120 LSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 179
++H + L +H+ G + + + + G + +I + D +SG++ N
Sbjct: 65 PMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSN 124
Query: 180 Q 180
+
Sbjct: 125 E 125
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 25.8 bits (55), Expect = 4.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 151 GQSGAGKSTIIRLL 164
G G+GK+T +
Sbjct: 16 GNIGSGKTTYLNHF 29
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 25.9 bits (55), Expect = 5.1
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
Query: 119 RLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFID 178
L+ + H +E+ + ++ LL G +G GK T L
Sbjct: 9 SLNALSHNEEL-TNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI 67
Query: 179 NQNIKTVSQASLRQAIGVVPQDTVLFNNSIKAIQKNFVDMENM 221
+ + + V + S V E +
Sbjct: 68 DVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELL 110
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 25.7 bits (55), Expect = 5.1
Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 8/117 (6%)
Query: 150 VGQSGAGKSTIIRLL---FRFYDVESGDIF---IDNQNIKTVSQASLRQAIGVVPQDTVL 203
VG G+GK T + + + + +GD+ + + + + + + + +VP +TV
Sbjct: 14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETV- 72
Query: 204 FNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRNVSFSYTPER 260
+ ++ VD F + +V + + + + +R
Sbjct: 73 -LDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKR 128
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 25.7 bits (55), Expect = 5.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 154 GAGKSTIIRLL 164
AGKST R L
Sbjct: 13 RAGKSTQSRKL 23
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 25.7 bits (55), Expect = 5.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 145 VSLLQVGQSGAGKSTIIRLL 164
V +L +G AGK+T+++ L
Sbjct: 17 VRILLLGLDNAGKTTLLKQL 36
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 25.6 bits (55), Expect = 5.4
Identities = 4/14 (28%), Positives = 8/14 (57%)
Query: 154 GAGKSTIIRLLFRF 167
GK+T +L++
Sbjct: 13 RTGKTTQCNILYKK 26
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 25.6 bits (55), Expect = 5.5
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTVS 186
LL +G SG GKS ++ R Y + + IKTV
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVE 49
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 25.8 bits (55), Expect = 5.6
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 143 LFVSLLQVGQSGAGKSTIIRLL 164
+ +++ G GAGK T++ L
Sbjct: 1 MLIAI--EGVDGAGKRTLVEKL 20
>d1lm8v_ b.3.3.1 (V:) VHL {Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 25.6 bits (56), Expect = 5.6
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 10/68 (14%)
Query: 45 ILKNISFTVPAGKTLALLSGGEKQRVAIARTLLKAPQIVLLDEATS-ALDTKTERNIQSA 103
I NI+ V K L + R+L+K LD S D + N+Q
Sbjct: 88 IFANITLPVYTLKERCLQ---------VVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKD 138
Query: 104 LNRVCASR 111
L R+ R
Sbjct: 139 LERLTQER 146
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 25.5 bits (55), Expect = 5.7
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTV 185
+L +G SG GKS ++ R + ++ + IKTV
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV 44
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 25.4 bits (54), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 147 LLQVGQSGAGKSTIIR 162
+L VG AGK+TI+
Sbjct: 3 ILMVGLDAAGKTTILY 18
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 25.9 bits (55), Expect = 5.7
Identities = 12/109 (11%), Positives = 33/109 (30%), Gaps = 8/109 (7%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVP--------QDTV 202
G S +GK+T+ L + + + + + + V +A
Sbjct: 29 GLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYYLQWDVEW 88
Query: 203 LFNNSIKAIQKNFVDMENMFDLLQETCDVIDIPQAPMLCVAQGAVEFRN 251
L + + ++ + +D +T + + + V +
Sbjct: 89 LTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQR 137
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.9 bits (56), Expect = 5.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 147 LLQVGQSGAGKSTIIRLLF 165
LL +G +GKSTI++ +
Sbjct: 9 LLLLGAGESGKSTIVKQMR 27
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 25.7 bits (55), Expect = 5.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 150 VGQSGAGKSTIIRLL 164
SG GK+T+++ L
Sbjct: 8 AAWSGTGKTTLLKKL 22
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId:
5759]}
Length = 77
Score = 24.2 bits (52), Expect = 5.9
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 84 LLDEATSALDTKTERNIQSALNRVC 108
L++ + L TK ++ ++ +C
Sbjct: 11 LINTLENLLTTKGADKVKDYISSLC 35
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 24.1 bits (52), Expect = 6.5
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 84 LLDEATSALDTKTERNIQSALNRVC 108
++ + +D T+R++ +A RVC
Sbjct: 10 IVQKLKKMVDKPTQRSVSNAATRVC 34
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 25.5 bits (54), Expect = 6.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 150 VGQSGAGKSTIIRLLFRFYDV 170
G+S GKS+ I L ++
Sbjct: 29 AGRSNVGKSSFINSLINRKNL 49
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 25.4 bits (54), Expect = 7.0
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 145 VSLLQVGQSGAGKSTIIR 162
+ ++ VG GKS++I+
Sbjct: 3 IKMVVVGNGAVGKSSMIQ 20
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 25.8 bits (56), Expect = 7.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 146 SLLQVGQSGAGKSTIIRLLFRF 167
SLL G+SGAGK+ + + ++
Sbjct: 127 SLLITGESGAGKTENTKKVIQY 148
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 25.3 bits (54), Expect = 7.1
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 7/35 (20%)
Query: 147 LLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQN 181
++ VG G GKS + +F D F+++
Sbjct: 7 VIMVGSGGVGKSALTL---QF----MYDEFVEDYE 34
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.2 bits (54), Expect = 7.6
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 145 VSLLQVGQSGAGKSTIIRLLFRFYDVES 172
V +L +G +GKST ++ + +
Sbjct: 3 VKILLLGAGESGKSTFLK---QMRIIHG 27
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 25.3 bits (54), Expect = 7.7
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 150 VGQSGAGKSTIIRLLFR----FYDVESGDIF 176
GQ G+GK+++ +F V D F
Sbjct: 38 GGQPGSGKTSLRSAIFEETQGNVIVIDNDTF 68
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 25.4 bits (54), Expect = 7.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 150 VGQSGAGKSTII 161
VG +G+GKS II
Sbjct: 30 VGPNGSGKSNII 41
Score = 25.4 bits (54), Expect = 8.3
Identities = 10/44 (22%), Positives = 15/44 (34%)
Query: 86 DEATSALDTKTERNIQSALNRVCASRTTIIVAHRLSTIIHADEI 129
DE S LD + L I++ H + AD +
Sbjct: 248 DEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLL 291
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 25.4 bits (54), Expect = 7.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 154 GAGKSTIIRLL 164
GKST ++LL
Sbjct: 12 AVGKSTFVKLL 22
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.3 bits (54), Expect = 8.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 145 VSLLQVGQSGAGKSTIIR 162
+ LL +G +GKST I+
Sbjct: 3 LKLLLLGTGESGKSTFIK 20
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 25.2 bits (54), Expect = 8.2
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 147 LLQVGQSGAGKSTII-RLLFRFYDVESGDIFIDNQNIKTV 185
++ +G SG GKS ++ R +++ES +++
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 46
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 25.3 bits (54), Expect = 8.2
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 151 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQ 187
G + +GKS++ + + D + + +SQ
Sbjct: 9 GGTASGKSSVCAKIVQLLGQNEVD--YRQKQVVILSQ 43
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 24.9 bits (53), Expect = 8.5
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 141 GSLFVSLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTV 185
G+L + + VG GK+ ++ E + + +V
Sbjct: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSV 50
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 25.0 bits (53), Expect = 8.7
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 147 LLQVGQSGAGKSTIIR 162
++ +G S GK+ +
Sbjct: 5 IIVIGDSNVGKTCLTY 20
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 24.9 bits (54), Expect = 9.5
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 128 EILVMHAGEIVERGSLFVSLLQVGQSGAGKSTI-IRLLFRFYDVESGDI 175
E MH + G + +L G SG GKS + L+ R + + + D
Sbjct: 1 ERRSMHGVLVDIYG---LGVLITGDSGVGKSETALELVQRGHRLIADDR 46
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 25.1 bits (53), Expect = 9.8
Identities = 7/49 (14%), Positives = 16/49 (32%)
Query: 118 HRLSTIIHADEILVMHAGEIVERGSLFVSLLQVGQSGAGKSTIIRLLFR 166
R I + + + +G+ G GK+T+ + +
Sbjct: 20 VRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVK 68
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.135 0.374
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 955,159
Number of extensions: 41773
Number of successful extensions: 403
Number of sequences better than 10.0: 1
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 203
Length of query: 277
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 193
Effective length of database: 1,254,276
Effective search space: 242075268
Effective search space used: 242075268
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)