Query psy18011
Match_columns 163
No_of_seqs 230 out of 1748
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:14:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18011.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18011hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rle_A Golgi reassembly-stacki 100.0 6.3E-27 2.1E-31 175.0 18.9 158 1-159 23-207 (209)
2 4a8c_A Periplasmic PH-dependen 99.6 4.4E-14 1.5E-18 115.8 16.9 131 1-136 270-432 (436)
3 3id1_A Regulator of sigma E pr 99.6 3.4E-15 1.2E-19 98.0 7.9 78 1-81 9-94 (95)
4 3gsl_A Disks large homolog 4; 99.5 3.2E-13 1.1E-17 98.6 14.2 117 1-124 42-192 (196)
5 3pv2_A DEGQ; trypsin fold, PDZ 99.5 1.7E-13 5.7E-18 112.8 13.9 124 1-131 289-450 (451)
6 1w9e_A Syntenin 1; cell adhesi 99.5 8.6E-15 3E-19 105.1 3.3 120 1-133 34-164 (166)
7 1p1d_A PDZ45, glutamate recept 99.5 6.7E-13 2.3E-17 97.6 12.5 114 1-121 43-194 (196)
8 3r0h_A INAD, inactivation-NO-a 99.5 1.3E-12 4.5E-17 96.4 13.5 119 1-123 52-197 (206)
9 3i18_A LMO2051 protein; alpha- 99.4 5.7E-13 1.9E-17 88.0 8.2 75 1-80 14-90 (100)
10 2kjp_A Uncharacterized protein 99.4 1.3E-13 4.5E-18 89.7 4.3 74 1-79 8-84 (91)
11 2zpm_A Regulator of sigma E pr 99.4 1.2E-12 4.1E-17 84.7 8.1 61 1-65 11-71 (91)
12 2i6v_A General secretion pathw 99.4 6E-13 2.1E-17 85.7 5.8 58 2-63 27-85 (87)
13 2qt5_A Glutamate receptor-inte 99.4 1.3E-11 4.3E-16 90.9 13.7 112 1-121 40-194 (200)
14 3rle_A Golgi reassembly-stacki 99.4 2E-12 6.8E-17 96.2 9.2 80 1-82 119-198 (209)
15 2l97_A HTRA, putative serine p 99.4 3.6E-12 1.2E-16 88.5 9.1 61 1-66 64-125 (134)
16 2kl1_A YLBL protein; structure 99.4 2.2E-12 7.5E-17 84.3 7.2 74 1-79 12-88 (94)
17 1ky9_A Protease DO, DEGP, HTRA 99.3 1.9E-13 6.5E-18 112.4 2.1 123 1-130 293-446 (448)
18 2i4s_A General secretion pathw 99.3 3.7E-12 1.3E-16 84.8 7.5 58 2-63 45-103 (105)
19 2pkt_A PDZ and LIM domain prot 99.3 7.6E-12 2.6E-16 80.9 5.9 52 1-54 34-86 (91)
20 2vsp_A PDZ domain-containing p 99.2 1.2E-11 4.2E-16 80.0 6.1 51 1-54 34-86 (91)
21 3cyy_A Tight junction protein 99.2 1.1E-11 3.9E-16 80.1 5.9 58 1-63 30-90 (92)
22 2hga_A Conserved protein MTH13 99.2 2.8E-11 9.4E-16 83.2 7.6 73 1-80 32-105 (125)
23 2pa1_A PDZ and LIM domain prot 99.2 2.1E-11 7.1E-16 78.2 6.2 51 1-54 33-85 (87)
24 2pzd_A Serine protease HTRA2; 99.2 3.1E-11 1E-15 81.2 7.3 60 1-66 42-101 (113)
25 2uzc_A Human pdlim5, PDZ and L 99.2 2.8E-11 9.5E-16 77.7 6.6 52 1-54 34-86 (88)
26 2v90_A PDZ domain-containing p 99.2 1.3E-11 4.5E-16 80.6 5.1 54 1-56 37-91 (96)
27 2eaq_A LIM domain only protein 99.2 9.9E-12 3.4E-16 80.2 4.0 52 1-54 35-89 (90)
28 2w4f_A Protein LAP4; structura 99.2 3.3E-11 1.1E-15 78.7 6.5 53 1-54 41-93 (97)
29 2p3w_A Probable serine proteas 99.2 2.8E-11 9.6E-16 81.3 5.9 60 1-66 42-101 (112)
30 1wf7_A Enigma homologue protei 99.2 1.6E-11 5.5E-16 81.2 4.5 62 1-66 36-98 (103)
31 1qau_A Neuronal nitric oxide s 99.2 7.7E-11 2.6E-15 79.0 7.5 60 1-62 33-95 (112)
32 1vb7_A PDZ and LIM domain 2; P 99.2 4.9E-11 1.7E-15 77.6 6.3 51 1-54 37-89 (94)
33 3tsv_A Tight junction protein 99.2 6.7E-11 2.3E-15 81.0 7.1 53 1-54 58-112 (124)
34 2vz5_A TAX1-binding protein 3; 99.2 3.7E-11 1.3E-15 83.9 5.7 54 1-56 71-126 (139)
35 2eeg_A PDZ and LIM domain prot 99.2 8.6E-11 2.9E-15 76.4 7.0 52 1-54 39-91 (94)
36 1m5z_A GRIP, AMPA receptor int 99.1 8.6E-11 2.9E-15 75.8 6.5 51 1-53 39-90 (91)
37 2vsv_A Rhophilin-2; scaffold p 99.1 5.2E-11 1.8E-15 79.9 5.6 51 1-53 51-103 (109)
38 1ihj_A INAD; intermolecular di 99.1 8.1E-11 2.8E-15 77.0 6.4 52 1-54 44-97 (98)
39 2he4_A Na(+)/H(+) exchange reg 99.1 8.2E-11 2.8E-15 75.8 6.2 51 1-54 35-87 (90)
40 3suz_A Amyloid beta A4 precurs 99.1 4.4E-11 1.5E-15 96.7 5.9 113 1-120 239-372 (388)
41 2kv8_A RGS12, regulator of G-p 99.1 1.2E-10 4E-15 74.0 6.7 50 1-53 30-81 (83)
42 3stj_A Protease DEGQ; serine p 99.1 7.5E-11 2.5E-15 93.9 7.1 61 1-65 270-331 (345)
43 2jil_A GRIP1 protein, glutamat 99.1 6.2E-11 2.1E-15 77.4 5.5 51 1-54 39-92 (97)
44 1v5l_A PDZ and LIM domain 3; a 99.1 4.1E-11 1.4E-15 79.3 4.6 52 1-55 36-89 (103)
45 1x5q_A LAP4 protein; PDZ domai 99.1 1.1E-10 3.7E-15 78.1 6.7 54 1-55 53-106 (110)
46 1rgw_A ZAsp protein; PDZ, cyph 99.1 9.2E-11 3.1E-15 74.7 5.9 52 1-54 32-84 (85)
47 2yub_A LIMK-2, LIM domain kina 99.1 3.8E-11 1.3E-15 81.6 4.1 53 1-56 51-107 (118)
48 2i04_A Membrane-associated gua 99.1 1.2E-10 4.2E-15 74.2 6.3 51 1-52 32-85 (85)
49 3khf_A Microtubule-associated 99.1 9.5E-11 3.2E-15 76.9 5.8 52 1-55 41-94 (99)
50 2q3g_A PDZ and LIM domain prot 99.1 1.1E-10 3.7E-15 75.1 5.9 52 1-54 34-86 (89)
51 2rcz_A Tight junction protein 99.1 9.8E-11 3.3E-15 73.7 5.4 50 1-53 28-80 (81)
52 1whd_A RGS3, regulator of G-pr 99.1 1.6E-10 5.6E-15 76.0 6.7 52 1-54 43-95 (100)
53 2opg_A Multiple PDZ domain pro 99.1 2.2E-10 7.6E-15 74.9 7.2 53 1-55 37-91 (98)
54 1y8t_A Hypothetical protein RV 99.1 1.5E-10 5.3E-15 91.2 7.5 61 1-65 249-311 (324)
55 1n7e_A AMPA receptor interacti 99.1 2E-10 6.7E-15 75.1 6.7 52 1-54 37-90 (97)
56 1wh1_A KIAA1095 protein; PDZ d 99.1 6.1E-11 2.1E-15 81.1 4.1 52 1-54 55-107 (124)
57 2jxo_A Ezrin-radixin-moesin-bi 99.1 2.9E-11 1E-15 79.2 2.4 52 1-54 40-93 (98)
58 1kwa_A Hcask/LIN-2 protein; PD 99.1 1.3E-10 4.6E-15 74.7 5.5 51 1-54 32-85 (88)
59 2awx_A Synapse associated prot 99.1 1.9E-10 6.6E-15 76.3 6.4 61 1-65 40-102 (105)
60 4amh_A Disks large homolog 1; 99.1 4.1E-10 1.4E-14 74.9 8.1 62 1-64 39-103 (106)
61 2dls_A PDZ-rhogef, RHO guanine 99.1 2.4E-10 8.1E-15 74.2 6.7 51 1-54 36-87 (93)
62 1te0_A Protease DEGS; two doma 99.1 1.6E-10 5.4E-15 90.9 6.9 61 1-65 251-312 (318)
63 1vae_A Rhophilin 2, rhophilin, 99.1 9.3E-11 3.2E-15 78.9 4.7 51 1-53 43-95 (111)
64 3qik_A Phosphatidylinositol 3, 99.1 7.6E-11 2.6E-15 77.6 4.2 49 1-51 46-98 (101)
65 2f5y_A Regulator of G-protein 99.1 2.6E-10 9E-15 73.6 6.7 52 1-54 31-83 (91)
66 2fcf_A Multiple PDZ domain pro 99.1 1.6E-10 5.5E-15 76.2 5.8 51 1-54 46-99 (103)
67 3bpu_A Membrane-associated gua 99.1 2.5E-10 8.6E-15 73.2 6.5 49 3-54 35-86 (88)
68 1b8q_A Protein (neuronal nitri 99.1 1.4E-10 4.8E-15 79.5 5.6 61 1-65 40-103 (127)
69 2h2b_A Tight junction protein 99.1 2.2E-10 7.7E-15 76.1 6.4 52 1-54 46-97 (107)
70 3r68_A Na(+)/H(+) exchange reg 99.1 3.5E-10 1.2E-14 73.4 7.2 51 1-54 36-88 (95)
71 2ego_A General receptor for ph 99.1 2.9E-10 9.8E-15 74.2 6.7 51 1-53 44-95 (96)
72 2jre_A C60-1 PDZ domain peptid 99.1 2.1E-10 7E-15 76.4 6.1 52 1-54 51-104 (108)
73 1uit_A Human discs large 5 pro 99.1 1.2E-10 4E-15 78.8 4.9 53 1-54 49-101 (117)
74 2kom_A Partitioning defective 99.1 3E-10 1E-14 77.4 6.9 53 1-54 65-120 (121)
75 2vwr_A Ligand of NUMB protein 99.1 2E-10 6.9E-15 74.7 5.7 52 1-54 36-89 (95)
76 2edp_A Fragment, shroom family 99.1 3.1E-10 1.1E-14 74.7 6.4 52 1-54 42-94 (100)
77 3sfj_A TAX1-binding protein 3; 99.1 2.8E-10 9.5E-15 75.2 6.1 51 1-52 52-103 (104)
78 2fe5_A Presynaptic protein SAP 99.1 3.7E-10 1.3E-14 73.2 6.6 52 1-54 40-93 (94)
79 3ngh_A PDZ domain-containing p 99.1 2.9E-10 1E-14 75.4 6.0 52 1-54 33-85 (106)
80 2koj_A Partitioning defective 99.1 4.2E-10 1.4E-14 75.2 6.8 53 1-54 46-101 (111)
81 3cbz_A Dishevelled-2; PDZ doma 99.0 8.8E-11 3E-15 78.5 3.3 52 1-54 40-96 (108)
82 1uf1_A KIAA1526 protein; PDZ d 99.0 1.6E-10 5.6E-15 79.3 4.7 53 1-56 53-106 (128)
83 2o2t_A Multiple PDZ domain pro 99.0 1.5E-10 5.2E-15 78.2 4.4 52 1-55 56-111 (117)
84 1v5q_A GRIP1 homolog, glutamat 99.0 1.6E-10 5.6E-15 78.7 4.6 52 1-54 52-107 (122)
85 2eeh_A PDZ domain-containing p 99.0 3.9E-10 1.3E-14 74.1 6.2 51 1-54 43-94 (100)
86 2qkv_A Inactivation-NO-after-p 99.0 3E-10 1E-14 74.2 5.6 51 1-53 38-90 (96)
87 2ejy_A 55 kDa erythrocyte memb 99.0 2.4E-10 8.3E-15 75.0 5.1 50 1-53 43-95 (97)
88 2q9v_A Membrane-associated gua 99.0 1.7E-10 5.7E-15 74.3 4.2 51 1-53 34-88 (90)
89 4fln_A Protease DO-like 2, chl 99.0 4.1E-09 1.4E-13 88.2 13.6 117 1-119 284-470 (539)
90 3i4w_A Disks large homolog 4; 99.0 5.3E-10 1.8E-14 73.8 6.7 52 1-54 42-95 (104)
91 2d90_A PDZ domain containing p 99.0 4.3E-10 1.5E-14 74.1 6.1 52 1-54 37-89 (102)
92 1y7n_A Amyloid beta A4 precurs 99.0 3.2E-10 1.1E-14 73.4 5.3 49 1-52 38-88 (90)
93 2djt_A Unnamed protein product 99.0 3.2E-10 1.1E-14 74.9 5.4 52 1-54 45-98 (104)
94 1wif_A RSGI RUH-020, riken cDN 99.0 2E-10 6.9E-15 78.9 4.3 51 1-53 56-110 (126)
95 1d5g_A Human phosphatase HPTP1 99.0 6.7E-10 2.3E-14 72.3 6.6 52 1-54 40-93 (96)
96 2qg1_A Multiple PDZ domain pro 99.0 4.4E-10 1.5E-14 72.6 5.7 52 1-54 36-89 (92)
97 2la8_A Inactivation-NO-after-p 99.0 4.9E-10 1.7E-14 74.6 6.1 52 1-54 32-85 (106)
98 1uez_A KIAA1526 protein; PDZ d 99.0 1.5E-10 5.1E-15 76.2 3.4 51 1-54 42-93 (101)
99 1tp5_A Presynaptic density pro 99.0 6.2E-10 2.1E-14 75.4 6.6 53 1-54 45-98 (119)
100 1g9o_A NHE-RF; PDZ domain, com 99.0 5.3E-10 1.8E-14 72.1 6.0 53 1-54 34-87 (91)
101 2edz_A PDZ domain-containing p 99.0 5.6E-10 1.9E-14 75.1 6.3 52 1-54 45-97 (114)
102 1q3o_A Shank1; PDZ, GKAP, pept 99.0 7E-10 2.4E-14 74.0 6.6 50 1-53 52-103 (109)
103 2dm8_A INAD-like protein; PDZ 99.0 7.8E-10 2.7E-14 74.5 6.8 52 1-54 50-103 (116)
104 2jik_A Synaptojanin-2 binding 99.0 6.1E-10 2.1E-14 73.2 6.1 52 1-54 44-97 (101)
105 1um1_A KIAA1849 protein, RSGI 99.0 8.8E-11 3E-15 78.5 2.0 62 1-66 43-106 (110)
106 2fne_A Multiple PDZ domain pro 99.0 5.6E-10 1.9E-14 75.6 6.0 51 1-54 60-113 (117)
107 1uep_A Membrane associated gua 99.0 2.4E-10 8.2E-15 75.6 4.1 52 1-54 41-96 (103)
108 2iwq_A Multiple PDZ domain pro 99.0 5E-10 1.7E-14 76.5 5.8 51 1-54 66-119 (123)
109 1wi2_A Riken cDNA 2700099C19; 99.0 4.7E-10 1.6E-14 74.3 5.3 50 1-54 48-99 (104)
110 1qav_A Alpha-1 syntrophin (res 99.0 1.1E-09 3.7E-14 70.5 6.9 50 1-52 37-88 (90)
111 1lcy_A HTRA2 serine protease; 99.0 7.5E-10 2.6E-14 87.3 7.2 60 1-66 263-322 (325)
112 1wfv_A Membrane associated gua 99.0 4.3E-10 1.5E-14 74.1 4.9 52 1-54 43-96 (103)
113 3qe1_A Sorting nexin-27, G pro 99.0 6.7E-10 2.3E-14 73.7 5.8 51 1-54 50-102 (107)
114 1ueq_A Membrane associated gua 99.0 9.4E-10 3.2E-14 75.0 6.5 53 1-54 51-106 (123)
115 3qo6_A Protease DO-like 1, chl 99.0 7.1E-10 2.4E-14 88.3 6.5 61 1-64 258-329 (348)
116 1wha_A KIAA0147 protein, scrib 99.0 7.6E-10 2.6E-14 73.3 5.6 51 1-54 45-98 (105)
117 2g5m_B Neurabin-2; spinophilin 99.0 1.6E-10 5.4E-15 77.6 2.3 52 1-54 42-95 (113)
118 2r4h_A Membrane-associated gua 99.0 9.9E-10 3.4E-14 73.7 6.2 52 1-54 56-109 (112)
119 2xkx_A Disks large homolog 4; 99.0 5.4E-09 1.8E-13 90.5 12.3 115 1-123 96-245 (721)
120 1r6j_A Syntenin 1; PDZ, membra 99.0 1.1E-09 3.8E-14 69.6 5.9 50 1-52 30-80 (82)
121 2i1n_A Discs, large homolog 3; 99.0 8.4E-10 2.9E-14 72.6 5.5 52 1-54 41-94 (102)
122 3o46_A Maguk P55 subfamily mem 99.0 7.8E-10 2.7E-14 71.7 5.2 51 1-54 35-88 (93)
123 1uew_A Membrane associated gua 99.0 7.7E-10 2.6E-14 74.4 5.2 52 1-54 50-103 (114)
124 2e7k_A Maguk P55 subfamily mem 99.0 5.8E-10 2E-14 72.2 4.4 50 1-53 36-87 (91)
125 3axa_A Afadin, nectin-3, prote 99.0 1.4E-09 4.9E-14 72.1 6.3 52 1-54 45-98 (106)
126 2iwo_A Multiple PDZ domain pro 98.9 6.6E-10 2.3E-14 75.6 4.5 53 1-55 60-114 (120)
127 1q7x_A PDZ2B domain of PTP-BAS 98.9 1.3E-09 4.5E-14 72.5 5.9 51 1-54 49-102 (108)
128 2iwn_A Multiple PDZ domain pro 98.9 1.4E-09 4.6E-14 70.7 5.8 52 1-54 40-93 (97)
129 3kzd_A TIAM-1, T-lymphoma inva 98.9 1.5E-09 5.1E-14 70.8 5.9 48 1-52 42-90 (94)
130 2kpk_A Membrane-associated gua 98.9 1.5E-09 5.3E-14 74.6 6.3 53 1-54 50-105 (129)
131 1wfg_A Regulating synaptic mem 98.9 1.8E-09 6E-14 74.6 6.5 53 1-54 72-127 (131)
132 2yt7_A Amyloid beta A4 precurs 98.9 9E-10 3.1E-14 72.5 4.8 51 1-53 44-98 (101)
133 1va8_A Maguk P55 subfamily mem 98.9 1.1E-09 3.9E-14 73.5 5.3 52 1-54 55-108 (113)
134 2dmz_A INAD-like protein; PDZ 98.9 6.6E-10 2.3E-14 76.3 4.2 52 1-55 53-107 (129)
135 1x6d_A Interleukin-16; PDZ dom 98.9 5E-10 1.7E-14 75.9 3.4 52 1-54 49-103 (119)
136 1wi4_A Synip, syntaxin binding 98.9 7.8E-10 2.7E-14 74.0 4.3 52 1-54 48-105 (109)
137 2d92_A INAD-like protein; PDZ 98.9 9.1E-10 3.1E-14 73.4 4.6 51 1-53 51-104 (108)
138 1v62_A KIAA1719 protein; struc 98.9 1.1E-09 3.7E-14 74.1 5.0 51 1-54 49-102 (117)
139 2yuy_A RHO GTPase activating p 98.9 5.1E-10 1.7E-14 76.7 3.4 51 1-54 68-120 (126)
140 2kjd_A Sodium/hydrogen exchang 98.9 4.5E-10 1.5E-14 77.0 3.0 52 1-54 40-93 (128)
141 2eei_A PDZ domain-containing p 98.9 1.3E-09 4.3E-14 72.3 5.1 52 1-54 39-91 (106)
142 2byg_A Channel associated prot 98.9 1.3E-09 4.4E-14 73.8 5.1 51 1-54 61-114 (117)
143 4a8c_A Periplasmic PH-dependen 98.9 3.3E-09 1.1E-13 86.8 8.5 61 1-66 370-430 (436)
144 3nfk_A Tyrosine-protein phosph 98.9 1.7E-09 5.7E-14 71.8 5.5 52 1-53 50-107 (107)
145 2gzv_A PRKCA-binding protein; 98.9 1.3E-09 4.4E-14 73.5 5.0 50 1-53 57-109 (114)
146 2dlu_A INAD-like protein; PDZ 98.9 1.5E-09 5.1E-14 72.5 5.2 52 1-54 45-98 (111)
147 2dkr_A LIN-7 homolog B; LIN-7B 98.9 1.8E-09 6.2E-14 69.7 5.4 52 1-54 37-90 (93)
148 1ujd_A KIAA0559 protein; PDZ d 98.9 2.3E-09 7.7E-14 72.5 6.0 52 1-54 56-109 (117)
149 1wf8_A Neurabin-I; PDZ domain, 98.9 1.4E-09 4.8E-14 72.3 4.9 52 1-54 47-100 (107)
150 2db5_A INAD-like protein; PDZ 98.9 2.1E-09 7.3E-14 73.7 5.8 51 1-54 61-115 (128)
151 3hpk_A Protein interacting wit 98.9 1.9E-09 6.5E-14 73.6 5.3 50 1-53 52-104 (125)
152 2d8i_A T-cell lymphoma invasio 98.9 1.4E-09 4.7E-14 73.4 4.5 50 1-54 51-101 (114)
153 3b76_A E3 ubiquitin-protein li 98.9 2.3E-09 7.7E-14 72.8 5.5 50 1-53 60-112 (118)
154 4e34_A Golgi-associated PDZ an 98.9 3.8E-09 1.3E-13 67.4 6.2 50 1-52 35-86 (87)
155 1nf3_C PAR-6B; semi-CRIB motif 98.9 2.8E-09 9.6E-14 73.2 5.8 51 1-54 72-125 (128)
156 3e17_A Tight junction protein 98.9 2.2E-09 7.6E-14 68.9 4.9 50 1-53 28-80 (88)
157 1um7_A Synapse-associated prot 98.9 4E-09 1.4E-13 70.5 6.1 52 1-54 46-99 (113)
158 3k1r_A Harmonin; protein-prote 98.9 3.2E-09 1.1E-13 77.7 6.0 50 1-54 117-168 (192)
159 2daz_A INAD-like protein; PDZ 98.9 2.1E-09 7.2E-14 73.3 4.7 52 1-54 58-111 (124)
160 1fc6_A Photosystem II D1 prote 98.9 6.4E-09 2.2E-13 83.9 8.2 64 1-65 106-171 (388)
161 1mfg_A ERB-B2 interacting prot 98.9 4.9E-09 1.7E-13 68.0 6.1 51 1-54 42-93 (95)
162 3gsl_A Disks large homolog 4; 98.9 3.2E-09 1.1E-13 77.2 5.7 52 1-55 137-191 (196)
163 2edv_A FERM and PDZ domain-con 98.9 3.2E-09 1.1E-13 69.2 5.1 51 1-54 38-89 (96)
164 3num_A Serine protease HTRA1; 98.8 3E-10 1E-14 89.9 0.0 60 1-66 261-320 (332)
165 1uhp_A Hypothetical protein KI 98.8 5.5E-09 1.9E-13 69.3 6.1 52 1-54 48-101 (107)
166 2eno_A Synaptojanin-2-binding 98.8 4.5E-09 1.5E-13 71.2 5.4 52 1-54 54-107 (120)
167 1ufx_A KIAA1526 protein; PDZ d 98.8 1.7E-09 5.8E-14 71.6 3.2 52 1-54 39-97 (103)
168 1i16_A Interleukin 16, LCF; cy 98.8 2.8E-09 9.5E-14 73.4 4.3 53 1-54 64-118 (130)
169 1n7t_A 99-MER peptide of densi 98.8 6.5E-09 2.2E-13 68.5 5.9 50 1-53 50-100 (103)
170 4fgm_A Aminopeptidase N family 98.8 1.1E-08 3.7E-13 86.8 8.6 61 1-66 503-564 (597)
171 2xkx_A Disks large homolog 4; 98.8 6.3E-08 2.2E-12 83.8 13.5 53 1-55 191-245 (721)
172 1wg6_A Hypothetical protein (r 98.8 2.9E-09 1E-13 73.0 4.2 53 1-54 62-122 (127)
173 2z17_A Pleckstrin homology SEC 98.8 2E-09 6.9E-14 71.1 3.1 47 1-50 55-103 (104)
174 1x5n_A Harmonin; PDZ domain, u 98.8 4.7E-09 1.6E-13 70.4 4.9 51 1-54 48-100 (114)
175 3l4f_D SH3 and multiple ankyri 98.8 6.6E-09 2.3E-13 71.7 5.5 52 1-54 72-124 (132)
176 3pv2_A DEGQ; trypsin fold, PDZ 98.8 8.3E-09 2.8E-13 84.8 6.7 58 1-63 393-450 (451)
177 1v6b_A Harmonin isoform A1; st 98.8 4E-09 1.4E-13 71.4 4.0 52 1-53 50-106 (118)
178 2dc2_A GOPC, golgi associated 98.8 1.2E-08 4.1E-13 67.3 6.2 51 1-54 42-95 (103)
179 2cs5_A Tyrosine-protein phosph 98.8 4E-09 1.4E-13 71.3 3.9 53 1-54 48-106 (119)
180 2ehr_A INAD-like protein; PDZ 98.8 7E-09 2.4E-13 69.9 5.0 52 1-54 57-110 (117)
181 2qt5_A Glutamate receptor-inte 98.8 6.7E-09 2.3E-13 76.2 5.1 51 1-54 142-195 (200)
182 2qbw_A PDZ-fibronectin fusion 98.8 2.8E-08 9.5E-13 72.4 7.9 60 1-63 31-94 (195)
183 3r0h_A INAD, inactivation-NO-a 98.7 1.6E-08 5.4E-13 74.3 5.7 52 1-54 143-196 (206)
184 1uju_A Scribble; PDZ domain, c 98.7 1.7E-09 5.8E-14 72.3 0.4 51 1-54 51-104 (111)
185 1ujv_A Membrane associated gua 98.7 4.5E-08 1.5E-12 63.8 6.8 48 6-54 42-91 (96)
186 3k50_A Putative S41 protease; 98.7 8.6E-09 2.9E-13 83.6 3.1 51 1-55 97-147 (403)
187 3tsz_A Tight junction protein 98.7 2.9E-08 1E-12 80.2 5.9 52 1-54 38-92 (391)
188 2csj_A TJP2 protein; PDZ domai 98.6 1.9E-08 6.5E-13 67.8 4.0 51 1-54 53-104 (117)
189 2krg_A Na(+)/H(+) exchange reg 98.6 9.5E-09 3.3E-13 76.7 1.0 51 1-54 40-93 (216)
190 2lob_A Golgi-associated PDZ an 98.0 6.9E-09 2.4E-13 69.7 0.0 48 1-51 60-110 (112)
191 3shw_A Tight junction protein 98.5 9.8E-08 3.3E-12 78.6 5.9 52 1-54 30-84 (468)
192 3soe_A Membrane-associated gua 98.5 3.4E-07 1.2E-11 61.5 7.3 49 6-55 44-94 (113)
193 1ky9_A Protease DO, DEGP, HTRA 98.5 1.7E-08 5.9E-13 82.9 0.0 51 1-54 390-440 (448)
194 1z87_A Alpha-1-syntrophin; pro 98.4 1.9E-07 6.5E-12 71.6 4.5 52 1-54 110-163 (263)
195 1k32_A Tricorn protease; prote 98.2 3E-06 1E-10 75.4 8.0 59 3-65 765-825 (1045)
196 3gge_A PDZ domain-containing p 98.2 5.6E-06 1.9E-10 53.7 6.8 52 1-53 35-89 (95)
197 3suz_A Amyloid beta A4 precurs 97.8 2.7E-06 9.3E-11 68.5 0.0 49 1-52 322-372 (388)
198 2kjp_A Uncharacterized protein 97.7 4.8E-05 1.6E-09 48.8 4.6 58 88-150 21-87 (91)
199 1p1d_A PDZ45, glutamate recept 97.5 0.00017 5.9E-09 52.3 5.8 54 1-54 142-195 (196)
200 3i18_A LMO2051 protein; alpha- 97.5 0.00067 2.3E-08 43.9 7.7 59 88-151 27-93 (100)
201 4fln_A Protease DO-like 2, chl 97.4 0.00025 8.4E-09 59.4 5.7 49 1-51 422-470 (539)
202 2kl1_A YLBL protein; structure 97.3 0.001 3.5E-08 42.6 6.8 56 88-148 25-89 (94)
203 2zpm_A Regulator of sigma E pr 97.2 0.0013 4.5E-08 41.5 6.4 56 88-148 25-89 (91)
204 2hga_A Conserved protein MTH13 96.5 0.0073 2.5E-07 40.8 6.4 56 88-150 45-107 (125)
205 2l97_A HTRA, putative serine p 96.2 0.017 5.9E-07 39.2 6.8 40 94-135 80-126 (134)
206 1uf1_A KIAA1526 protein; PDZ d 96.2 0.0032 1.1E-07 42.4 3.1 82 41-135 6-115 (128)
207 3id1_A Regulator of sigma E pr 95.6 0.035 1.2E-06 35.3 6.1 57 88-147 23-92 (95)
208 2i6v_A General secretion pathw 95.3 0.063 2.1E-06 33.4 6.3 40 88-132 40-86 (87)
209 2i4s_A General secretion pathw 95.1 0.083 2.8E-06 34.0 6.6 41 87-132 57-104 (105)
210 1qau_A Neuronal nitric oxide s 94.0 0.17 5.9E-06 32.7 6.2 39 93-133 50-96 (112)
211 1te0_A Protease DEGS; two doma 93.5 0.16 5.5E-06 39.3 6.1 40 93-134 267-313 (318)
212 1b8q_A Protein (neuronal nitri 93.4 0.13 4.4E-06 34.2 4.8 40 94-135 58-105 (127)
213 2pzd_A Serine protease HTRA2; 93.4 0.21 7.2E-06 32.3 5.8 41 88-135 56-102 (113)
214 3cyy_A Tight junction protein 93.1 0.12 4.2E-06 32.0 4.2 38 93-133 47-92 (92)
215 3stj_A Protease DEGQ; serine p 93.0 0.23 8E-06 39.0 6.4 41 93-135 286-333 (345)
216 2p3w_A Probable serine proteas 92.7 0.2 6.8E-06 32.4 4.9 41 88-135 56-102 (112)
217 3soe_A Membrane-associated gua 92.2 0.26 9E-06 32.5 5.0 33 88-123 53-94 (113)
218 1ujv_A Membrane associated gua 92.0 0.24 8.3E-06 31.2 4.5 30 93-122 53-91 (96)
219 2vz5_A TAX1-binding protein 3; 92.0 0.21 7.2E-06 33.9 4.4 38 93-132 87-132 (139)
220 3qo6_A Protease DO-like 1, chl 91.8 0.29 1E-05 38.3 5.7 40 93-134 285-331 (348)
221 4fgm_A Aminopeptidase N family 91.7 0.52 1.8E-05 39.9 7.4 41 93-135 519-565 (597)
222 2awx_A Synapse associated prot 90.5 0.41 1.4E-05 30.5 4.5 39 93-134 57-103 (105)
223 4amh_A Disks large homolog 1; 90.3 1.1 3.7E-05 28.6 6.5 40 93-133 56-104 (106)
224 1wi4_A Synip, syntaxin binding 90.2 0.48 1.6E-05 30.6 4.7 30 93-122 65-105 (109)
225 1wf7_A Enigma homologue protei 90.2 0.13 4.5E-06 32.8 1.9 41 88-134 50-98 (103)
226 1w9e_A Syntenin 1; cell adhesi 90.1 0.97 3.3E-05 31.2 6.5 52 93-150 50-109 (166)
227 2v90_A PDZ domain-containing p 90.0 0.25 8.7E-06 30.9 3.1 31 93-124 53-91 (96)
228 1r6j_A Syntenin 1; PDZ, membra 90.0 1.2 4E-05 27.5 6.1 27 93-120 46-80 (82)
229 2vsp_A PDZ domain-containing p 89.6 0.45 1.5E-05 29.4 4.0 29 93-122 50-86 (91)
230 1lcy_A HTRA2 serine protease; 89.5 0.66 2.3E-05 35.9 5.7 38 93-134 279-322 (325)
231 1wh1_A KIAA1095 protein; PDZ d 88.8 0.13 4.6E-06 34.0 1.2 36 93-130 72-113 (124)
232 2pkt_A PDZ and LIM domain prot 88.8 0.55 1.9E-05 29.0 4.0 29 93-122 50-86 (91)
233 1um1_A KIAA1849 protein, RSGI 88.7 0.096 3.3E-06 33.9 0.3 40 93-135 60-107 (110)
234 1kwa_A Hcask/LIN-2 protein; PD 88.7 0.62 2.1E-05 28.7 4.1 28 93-121 49-84 (88)
235 2pa1_A PDZ and LIM domain prot 87.9 0.93 3.2E-05 27.6 4.6 28 93-121 49-84 (87)
236 2jil_A GRIP1 protein, glutamat 87.9 0.62 2.1E-05 29.0 3.8 29 93-122 56-92 (97)
237 1y8t_A Hypothetical protein RV 87.6 1.1 3.7E-05 34.6 5.8 41 93-134 265-312 (324)
238 3bpu_A Membrane-associated gua 87.6 0.97 3.3E-05 27.6 4.6 29 93-121 48-85 (88)
239 1v5q_A GRIP1 homolog, glutamat 87.6 0.48 1.6E-05 31.2 3.3 30 93-122 69-107 (122)
240 1ihj_A INAD; intermolecular di 87.2 0.95 3.2E-05 28.2 4.4 28 93-121 61-96 (98)
241 1n7e_A AMPA receptor interacti 87.0 1.2 4.2E-05 27.7 4.9 29 93-122 54-90 (97)
242 1fc6_A Photosystem II D1 prote 86.7 1.6 5.4E-05 34.6 6.4 42 93-134 122-172 (388)
243 2yub_A LIMK-2, LIM domain kina 86.5 0.75 2.5E-05 30.3 3.8 32 88-123 67-106 (118)
244 2i04_A Membrane-associated gua 86.5 1.1 3.7E-05 27.1 4.3 28 93-120 49-85 (85)
245 3gge_A PDZ domain-containing p 86.3 4.6 0.00016 25.6 7.5 33 87-122 49-90 (95)
246 3khf_A Microtubule-associated 86.1 1.4 4.9E-05 27.4 4.9 31 93-124 57-95 (99)
247 1ueq_A Membrane associated gua 85.7 1.4 4.9E-05 28.8 4.9 29 93-121 68-105 (123)
248 2d92_A INAD-like protein; PDZ 85.5 0.98 3.4E-05 28.9 3.9 29 93-121 68-104 (108)
249 2yt7_A Amyloid beta A4 precurs 85.5 0.87 3E-05 28.7 3.6 28 93-120 61-97 (101)
250 2kom_A Partitioning defective 85.3 1.5 5.2E-05 28.7 4.8 29 93-121 82-119 (121)
251 1i16_A Interleukin 16, LCF; cy 85.2 1.3 4.5E-05 29.4 4.5 29 93-121 81-117 (130)
252 2koj_A Partitioning defective 85.2 1.6 5.5E-05 27.8 4.8 30 93-122 63-101 (111)
253 3sfj_A TAX1-binding protein 3; 85.1 1.3 4.6E-05 27.8 4.4 28 93-120 68-103 (104)
254 1wif_A RSGI RUH-020, riken cDN 84.9 1.2 4.2E-05 29.7 4.2 29 93-121 73-110 (126)
255 2fcf_A Multiple PDZ domain pro 84.9 1.5 5E-05 27.6 4.5 31 93-124 63-101 (103)
256 1uep_A Membrane associated gua 84.8 0.67 2.3E-05 29.4 2.8 30 93-122 58-96 (103)
257 3num_A Serine protease HTRA1; 84.7 0.18 6.2E-06 39.2 0.0 40 93-136 277-322 (332)
258 2he4_A Na(+)/H(+) exchange reg 84.5 1.7 5.8E-05 26.6 4.5 29 93-122 51-87 (90)
259 1wfg_A Regulating synaptic mem 84.4 1.5 5E-05 29.2 4.5 30 93-122 89-127 (131)
260 1vb7_A PDZ and LIM domain 2; P 84.4 1.6 5.3E-05 27.0 4.4 29 93-122 53-89 (94)
261 2uzc_A Human pdlim5, PDZ and L 84.2 1.9 6.4E-05 26.2 4.6 28 93-121 50-85 (88)
262 2kpk_A Membrane-associated gua 84.2 1.4 4.9E-05 29.1 4.4 29 93-121 67-104 (129)
263 3cbz_A Dishevelled-2; PDZ doma 84.2 1.3 4.3E-05 28.4 4.0 30 93-122 57-96 (108)
264 1v5l_A PDZ and LIM domain 3; a 84.0 0.97 3.3E-05 28.6 3.3 29 94-123 53-89 (103)
265 2vsv_A Rhophilin-2; scaffold p 83.6 1.6 5.6E-05 28.2 4.3 29 93-121 67-103 (109)
266 1wha_A KIAA0147 protein, scrib 83.4 2 6.9E-05 27.1 4.7 30 93-123 62-99 (105)
267 1uew_A Membrane associated gua 83.0 1.5 5E-05 28.3 3.9 28 93-121 67-102 (114)
268 2g5m_B Neurabin-2; spinophilin 82.9 0.3 1E-05 31.6 0.4 40 93-135 59-106 (113)
269 2dmz_A INAD-like protein; PDZ 82.4 1.7 5.9E-05 28.6 4.2 29 93-122 70-106 (129)
270 2djt_A Unnamed protein product 82.3 1.9 6.4E-05 27.1 4.2 29 93-122 62-98 (104)
271 2edv_A FERM and PDZ domain-con 82.0 2.7 9.4E-05 26.1 4.8 28 94-122 54-89 (96)
272 2eaq_A LIM domain only protein 81.6 0.96 3.3E-05 27.7 2.5 29 93-121 51-88 (90)
273 2jre_A C60-1 PDZ domain peptid 81.5 1.8 6.3E-05 27.4 3.9 29 93-122 68-104 (108)
274 2d90_A PDZ domain containing p 81.3 0.73 2.5E-05 29.1 1.9 29 93-122 53-89 (102)
275 1ujd_A KIAA0559 protein; PDZ d 81.3 2 6.7E-05 27.9 4.0 28 93-121 73-108 (117)
276 2opg_A Multiple PDZ domain pro 81.0 3.5 0.00012 25.5 5.1 29 93-122 54-90 (98)
277 1d5g_A Human phosphatase HPTP1 81.0 2.8 9.7E-05 25.8 4.6 28 93-121 57-92 (96)
278 2q3g_A PDZ and LIM domain prot 80.9 2.7 9.4E-05 25.5 4.5 29 93-122 50-86 (89)
279 2eeg_A PDZ and LIM domain prot 80.0 2.9 9.9E-05 25.8 4.4 28 93-121 55-90 (94)
280 1v62_A KIAA1719 protein; struc 79.9 2.4 8.1E-05 27.5 4.1 28 94-122 67-102 (117)
281 2rcz_A Tight junction protein 79.7 2.9 9.8E-05 24.6 4.2 27 93-120 45-79 (81)
282 1vae_A Rhophilin 2, rhophilin, 79.4 2 6.9E-05 27.7 3.6 28 93-120 59-94 (111)
283 2kjd_A Sodium/hydrogen exchang 79.4 0.14 4.8E-06 34.0 -2.2 40 93-134 56-105 (128)
284 2iwq_A Multiple PDZ domain pro 78.4 3.1 0.00011 27.3 4.3 30 93-123 83-120 (123)
285 2dls_A PDZ-rhogef, RHO guanine 78.4 3.6 0.00012 25.2 4.5 29 93-123 52-88 (93)
286 2iwo_A Multiple PDZ domain pro 78.2 1.6 5.6E-05 28.5 2.9 30 93-123 77-114 (120)
287 1wg6_A Hypothetical protein (r 78.2 2.4 8.3E-05 27.9 3.8 30 93-122 79-122 (127)
288 1x5q_A LAP4 protein; PDZ domai 78.0 4.2 0.00014 25.7 4.8 29 93-122 69-105 (110)
289 3b76_A E3 ubiquitin-protein li 77.5 2.7 9.1E-05 27.5 3.8 29 93-122 77-113 (118)
290 2iwn_A Multiple PDZ domain pro 77.2 2.4 8.1E-05 26.1 3.3 28 93-121 57-92 (97)
291 1wfv_A Membrane associated gua 76.7 2.1 7.3E-05 26.7 3.0 29 93-122 60-96 (103)
292 2i1n_A Discs, large homolog 3; 76.7 4 0.00014 25.4 4.4 29 93-122 58-94 (102)
293 1whd_A RGS3, regulator of G-pr 76.5 3.9 0.00013 25.5 4.3 28 93-121 59-94 (100)
294 1ufx_A KIAA1526 protein; PDZ d 76.4 2.3 8E-05 26.9 3.2 28 94-121 57-96 (103)
295 2jik_A Synaptojanin-2 binding 76.1 4 0.00014 25.3 4.3 29 93-122 61-97 (101)
296 1rgw_A ZAsp protein; PDZ, cyph 76.0 4.3 0.00015 24.2 4.3 27 94-121 49-83 (85)
297 3axa_A Afadin, nectin-3, prote 75.8 4.9 0.00017 25.2 4.6 29 93-122 62-98 (106)
298 2jxo_A Ezrin-radixin-moesin-bi 75.7 1.9 6.4E-05 26.8 2.5 29 93-121 56-92 (98)
299 2dlu_A INAD-like protein; PDZ 75.7 4 0.00014 25.9 4.2 31 93-124 62-100 (111)
300 1k32_A Tricorn protease; prote 75.3 4.7 0.00016 35.7 5.8 42 92-134 779-826 (1045)
301 3o46_A Maguk P55 subfamily mem 75.2 3.4 0.00012 25.3 3.7 28 93-121 52-87 (93)
302 2daz_A INAD-like protein; PDZ 75.1 1.1 3.8E-05 29.4 1.3 40 93-134 75-122 (124)
303 2w4f_A Protein LAP4; structura 74.9 4.8 0.00016 24.7 4.3 29 93-122 57-93 (97)
304 2fne_A Multiple PDZ domain pro 74.6 5.2 0.00018 25.9 4.6 28 93-121 77-112 (117)
305 2f5y_A Regulator of G-protein 74.4 6.2 0.00021 24.0 4.7 28 93-121 47-82 (91)
306 3tsv_A Tight junction protein 74.3 4.7 0.00016 26.4 4.4 29 93-121 74-111 (124)
307 2fe5_A Presynaptic protein SAP 74.3 5.8 0.0002 24.1 4.6 28 93-121 57-92 (94)
308 2dm8_A INAD-like protein; PDZ 74.1 5.3 0.00018 25.5 4.5 29 93-122 67-103 (116)
309 2eeh_A PDZ domain-containing p 74.1 5.4 0.00019 24.8 4.5 28 93-122 59-94 (100)
310 2vwr_A Ligand of NUMB protein 73.7 4.8 0.00017 24.7 4.1 29 93-122 53-89 (95)
311 2r4h_A Membrane-associated gua 73.6 4.4 0.00015 25.9 4.0 27 93-120 73-107 (112)
312 2edz_A PDZ domain-containing p 73.6 4.5 0.00015 25.9 4.1 38 93-133 61-106 (114)
313 2csj_A TJP2 protein; PDZ domai 73.6 1.4 4.9E-05 28.5 1.6 28 93-121 68-103 (117)
314 3qe1_A Sorting nexin-27, G pro 73.6 5.9 0.0002 24.9 4.6 29 93-122 66-102 (107)
315 2q9v_A Membrane-associated gua 73.5 2.2 7.5E-05 26.0 2.4 29 93-121 51-88 (90)
316 3ngh_A PDZ domain-containing p 73.5 4.2 0.00014 25.5 3.9 28 93-121 49-84 (106)
317 1v6b_A Harmonin isoform A1; st 73.4 4.1 0.00014 26.4 3.9 29 93-121 67-106 (118)
318 2yuy_A RHO GTPase activating p 73.4 2.6 9E-05 27.6 2.9 28 94-122 85-120 (126)
319 1wf8_A Neurabin-I; PDZ domain, 73.1 6 0.00021 24.9 4.6 29 93-122 64-100 (107)
320 1wi2_A Riken cDNA 2700099C19; 73.0 4.9 0.00017 25.2 4.1 27 93-121 64-98 (104)
321 1mfg_A ERB-B2 interacting prot 72.7 5.6 0.00019 24.3 4.3 28 93-121 57-92 (95)
322 2qg1_A Multiple PDZ domain pro 72.6 6.6 0.00022 23.8 4.5 28 93-121 53-88 (92)
323 2ejy_A 55 kDa erythrocyte memb 72.2 5.6 0.00019 25.0 4.2 27 93-120 60-94 (97)
324 3egg_C Spinophilin; PP1, serin 72.0 5.6 0.00019 27.8 4.5 27 93-120 135-169 (170)
325 2o2t_A Multiple PDZ domain pro 71.8 2.1 7.3E-05 27.5 2.1 29 93-122 73-110 (117)
326 1qav_A Alpha-1 syntrophin (res 71.6 7.6 0.00026 23.4 4.7 27 93-120 54-88 (90)
327 1va8_A Maguk P55 subfamily mem 71.6 5.5 0.00019 25.5 4.1 29 93-122 72-108 (113)
328 3hpk_A Protein interacting wit 71.6 5.2 0.00018 26.0 4.1 29 93-122 69-105 (125)
329 2byg_A Channel associated prot 71.6 6.4 0.00022 25.4 4.5 28 93-121 78-113 (117)
330 2qbw_A PDZ-fibronectin fusion 71.2 12 0.0004 26.1 6.1 42 88-133 44-94 (195)
331 1q7x_A PDZ2B domain of PTP-BAS 70.9 6.6 0.00023 24.7 4.4 29 93-122 66-102 (108)
332 1n7t_A 99-MER peptide of densi 70.4 7 0.00024 24.3 4.4 28 93-121 65-100 (103)
333 1g9o_A NHE-RF; PDZ domain, com 70.3 5.9 0.0002 24.0 3.9 28 93-120 50-85 (91)
334 2h2b_A Tight junction protein 70.0 5.4 0.00018 25.0 3.8 32 93-124 61-99 (107)
335 2ego_A General receptor for ph 69.7 7.3 0.00025 23.9 4.3 27 93-120 60-94 (96)
336 1x6d_A Interleukin-16; PDZ dom 69.3 6 0.0002 25.4 3.9 29 94-122 67-103 (119)
337 3qik_A Phosphatidylinositol 3, 68.7 5.5 0.00019 25.5 3.5 30 87-119 59-98 (101)
338 1uhp_A Hypothetical protein KI 68.5 8.1 0.00028 24.2 4.4 28 93-121 65-100 (107)
339 1nf3_C PAR-6B; semi-CRIB motif 67.9 7.8 0.00027 25.4 4.3 29 93-122 89-125 (128)
340 2db5_A INAD-like protein; PDZ 66.9 11 0.00039 24.4 5.0 28 94-122 79-115 (128)
341 3nfk_A Tyrosine-protein phosph 65.3 7.1 0.00024 24.5 3.6 28 93-120 68-106 (107)
342 3r68_A Na(+)/H(+) exchange reg 65.2 8.8 0.0003 23.3 4.0 28 93-121 52-87 (95)
343 3k1r_A Harmonin; protein-prote 64.8 8.3 0.00028 27.1 4.2 26 93-120 133-166 (192)
344 1q3o_A Shank1; PDZ, GKAP, pept 64.5 10 0.00034 23.9 4.3 27 93-120 68-102 (109)
345 2ehr_A INAD-like protein; PDZ 64.2 8.3 0.00028 24.6 3.8 29 93-122 74-110 (117)
346 2eno_A Synaptojanin-2-binding 61.3 10 0.00036 24.3 3.9 27 93-120 71-105 (120)
347 2dc2_A GOPC, golgi associated 61.1 12 0.00042 23.3 4.2 28 93-121 59-94 (103)
348 2qkv_A Inactivation-NO-after-p 61.1 13 0.00043 22.8 4.2 28 93-121 55-90 (96)
349 2la8_A Inactivation-NO-after-p 59.1 17 0.00058 22.9 4.6 28 93-121 49-84 (106)
350 3l4f_D SH3 and multiple ankyri 58.4 13 0.00045 24.5 4.1 28 93-121 88-123 (132)
351 3tsz_A Tight junction protein 49.2 20 0.00069 28.4 4.4 29 93-121 54-91 (391)
352 3dor_A Protein CT_858, CPAF; m 47.8 4.7 0.00016 33.9 0.5 22 10-32 108-129 (583)
353 1z87_A Alpha-1-syntrophin; pro 47.5 14 0.00048 27.7 3.1 29 93-122 127-163 (263)
354 1jw2_A Hemolysin expression mo 36.0 3.1 0.00011 24.9 -1.7 17 147-163 54-71 (72)
355 3k50_A Putative S41 protease; 32.9 18 0.00062 28.8 1.7 31 93-124 113-148 (403)
356 3shw_A Tight junction protein 31.4 53 0.0018 26.8 4.3 29 93-121 46-83 (468)
357 1eik_A RNA polymerase subunit 27.2 27 0.00092 21.2 1.4 18 4-22 42-60 (77)
358 3pei_A Cytosol aminopeptidase; 27.0 14 0.00047 30.4 0.1 24 3-28 305-328 (486)
359 1lam_A Leucine aminopeptidase; 25.7 14 0.00046 30.5 -0.2 24 3-28 304-327 (484)
360 1gyt_A Cytosol aminopeptidase; 25.2 13 0.00046 30.6 -0.3 24 3-28 324-347 (503)
361 3ij3_A Cytosol aminopeptidase; 24.2 14 0.00049 30.3 -0.3 24 3-28 304-327 (482)
362 4efd_A Aminopeptidase; structu 24.1 17 0.00059 30.1 0.2 23 3-27 344-366 (522)
363 1hmj_A RPB5, protein (subunit 23.9 29 0.00099 21.1 1.1 17 5-22 41-58 (78)
364 3h8g_F Cytosol aminopeptidase; 23.9 15 0.00053 30.2 -0.2 24 3-28 321-344 (497)
365 3jru_B Probable cytosol aminop 23.6 15 0.00051 30.3 -0.3 24 3-28 316-339 (490)
366 2jqt_A H-NS/STPA-binding prote 23.1 11 0.00038 22.4 -0.8 14 150-163 54-70 (71)
367 2l66_A SSO7C4, transcriptional 22.3 27 0.00092 19.1 0.7 13 6-19 20-32 (53)
368 3kzw_A Cytosol aminopeptidase; 22.2 16 0.00056 30.2 -0.3 24 3-28 337-360 (515)
369 2hc9_A Leucine aminopeptidase 21.3 21 0.0007 29.4 0.1 24 3-28 306-329 (491)
370 2j3t_D Trafficking protein par 20.9 91 0.0031 22.7 3.5 46 7-53 52-101 (219)
371 3kr4_A M17 leucyl aminopeptida 20.5 19 0.00065 29.9 -0.3 24 3-28 348-371 (528)
No 1
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.95 E-value=6.3e-27 Score=175.04 Aligned_cols=158 Identities=50% Similarity=0.851 Sum_probs=127.4
Q ss_pred CCCCChhhhcCCccCC-eEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccCCCCCCcceeeeEE
Q psy18011 1 VQDNSPGQKAGLEAFF-DFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSI 79 (163)
Q Consensus 1 V~~~SpA~~AGL~~~G-D~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl~~ 79 (163)
|.++|||++|||++ | |+|++|||+++.+|.+....++....++++.++|+|++..+..++++.|...|.....+|+.+
T Consensus 23 V~~~SpA~~AGL~~-G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~~~lGi~~ 101 (209)
T 3rle_A 23 VQENSPGHRAGLEP-FFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSI 101 (209)
T ss_dssp ECTTSHHHHTTCCT-TTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSSSSSCEEE
T ss_pred ECCCCHHHHCCCCc-CCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEcccccccccCccceEE
Confidence 57899999999999 9 999999999999998866677777778999999999766677788887654444456788877
Q ss_pred eeeccc---------------c----cc-cc-eEEEeeeCc-----hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEec
Q psy18011 80 RFCSFE---------------G----AN-EN-VWHILDQDN-----DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 133 (163)
Q Consensus 80 ~~~~~~---------------~----~~-~~-~~~I~~v~~-----~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p 133 (163)
...... + ++ .. +-.|+++|+ ++|.+++++++++++.|+|+|.+....++++++|
T Consensus 102 ~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~v~~~~~l~~~l~~~~g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 102 RFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp EEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSCCCSSSCHHHHHHHTTTSCEEEEEEETTTTEEEEEEECC
T ss_pred eecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCEeCCHHHHHHHHHhCCCCeEEEEEEECCceEEEEEEEEe
Confidence 631110 0 11 12 345888887 8899999988999999999996656789999999
Q ss_pred CCCCCCcceeceeecccccccccccc
Q psy18011 134 SNSWGGQGLLGVSIRFCSFEGANENV 159 (163)
Q Consensus 134 ~~~~~~~g~iG~~~~~~~~~~~~~~~ 159 (163)
...|++.|+|||.+++|+||++|.+=
T Consensus 182 ~~~~~g~g~lG~~~~~g~l~~~p~~~ 207 (209)
T 3rle_A 182 NSAWGGEGSLGCGIGYGYLHRIPTRP 207 (209)
T ss_dssp CTTSSSSSSSCEEEECSGGGCCCSCS
T ss_pred cCCCCCceeeeEEecCceeeeCCCCC
Confidence 87787899999999999999999863
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.60 E-value=4.4e-14 Score=115.80 Aligned_cols=131 Identities=14% Similarity=0.126 Sum_probs=86.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCceEEEEEEccCCCCCC---cceee
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQDVRTVNITPSNSWGG---QGLLG 76 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~---~~~lG 76 (163)
|.++|||++|||++ ||+|++|||++|.+|.+ +...+. ...++++.++|+|++.....++++........ ...+|
T Consensus 270 V~~~spA~~aGL~~-GD~I~~vnG~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~g 347 (436)
T 4a8c_A 270 VLPGSGSAKAGVKA-GDIITSLNGKPLNSFAE-LRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPA 347 (436)
T ss_pred ECCCChHHHCCCCC-CCEEEEECCEECCCHHH-HHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccccccccC
Confidence 56899999999999 99999999999999966 555554 45678999999998844333343322110000 01122
Q ss_pred eE-----------------Eeeecccc----cc-cceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEE
Q psy18011 77 VS-----------------IRFCSFEG----AN-ENVWHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRT 128 (163)
Q Consensus 77 l~-----------------~~~~~~~~----~~-~~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~ 128 (163)
+. +......+ ++ ..|-.|++||+ ++|.+++++.+ +++.|+|.| +++.+.
T Consensus 348 l~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~-~~v~l~v~R--~g~~~~ 424 (436)
T 4a8c_A 348 LEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKP-AIIALQIVR--GNESIY 424 (436)
T ss_pred ceeeecccccccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCC-CeEEEEEEE--CCEEEE
Confidence 22 11100001 11 11224999998 78999998754 489999998 678888
Q ss_pred EEEecCCC
Q psy18011 129 VNITPSNS 136 (163)
Q Consensus 129 v~v~p~~~ 136 (163)
++++|...
T Consensus 425 ~~~~~~~~ 432 (436)
T 4a8c_A 425 LLMRLEHH 432 (436)
T ss_pred EEEEeccc
Confidence 88888653
No 3
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.59 E-value=3.4e-15 Score=98.04 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=56.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCceEEEEEEccCCCCC-------Cc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQDVRTVNITPSNSWG-------GQ 72 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~-------~~ 72 (163)
|.++|||++|||++ ||+|++|||++|.+|++ +...+. ..+++++.++|.|++.....++++... .|. ..
T Consensus 9 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~d-~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~-~~~~~~~~~~~l 85 (95)
T 3id1_A 9 IAANSIAAEAQIAP-GTELKAVDGIETPDWDA-VRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLR-HWAFEPDKEDPV 85 (95)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECSSHHH-HHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECT-TCCCCTTTSCHH
T ss_pred eCCCCHHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcc-ccccCCCCCCHH
Confidence 46899999999999 99999999999999976 555554 444578999999986433344444433 221 12
Q ss_pred ceeeeEEee
Q psy18011 73 GLLGVSIRF 81 (163)
Q Consensus 73 ~~lGl~~~~ 81 (163)
..||+.++.
T Consensus 86 ~~lGl~p~~ 94 (95)
T 3id1_A 86 SSLGIRPRG 94 (95)
T ss_dssp HHTTEEECC
T ss_pred HHcCccCCC
Confidence 468998753
No 4
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.53 E-value=3.2e-13 Score=98.59 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=77.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCc--eEEEEEEccCCCCCCcceeee
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQ--DVRTVNITPSNSWGGQGLLGV 77 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~--~~~~v~~~~~~~~~~~~~lGl 77 (163)
|.|+|||++|| |++ ||+|++|||+++.+|.+.....+....+..+.+++.|.+.. ...++.+.... ..+|+
T Consensus 42 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~v~l~~~~-----~~lG~ 115 (196)
T 3gsl_A 42 IIPGGAAAQDGRLRV-NDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGP-----KGLGF 115 (196)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCCCEEEEEEEEEEBT-----TBSCE
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCCccccEEEEEecCC-----CCceE
Confidence 46899999999 999 99999999999999965443333445578899999986533 33344443221 13444
Q ss_pred EEee-----------------ecccc----cc--cceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 78 SIRF-----------------CSFEG----AN--ENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 78 ~~~~-----------------~~~~~----~~--~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
.+.. ....+ ++ ..|-.|++||+ +++.+++++ .++++.|+|.|++..
T Consensus 116 ~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 116 SIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAKPSNA 192 (196)
T ss_dssp EEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS-CCEEEEEEEEEESCC
T ss_pred EEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc-CCCeEEEEEeCCCCc
Confidence 4331 10011 11 11225999998 677788875 588999999995543
No 5
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.52 E-value=1.7e-13 Score=112.80 Aligned_cols=124 Identities=20% Similarity=0.266 Sum_probs=83.4
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCceEEEEEEccCCC--CC------C
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQDVRTVNITPSNS--WG------G 71 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~~~~~--~~------~ 71 (163)
|.++|||++|||++ ||+|++|||++|.+|.+ +...+. ...++++.++|+|++ +..++++.+... +. .
T Consensus 289 V~~~spA~~aGL~~-GDvI~~vnG~~v~~~~~-l~~~l~~~~~g~~v~l~V~R~g--~~~~~~v~l~~~~~~~~~~~~~~ 364 (451)
T 3pv2_A 289 VNPNSPAELAGLKA-GDIITQINDTKITQATQ-VKTTISLLRVGSTVKIIVERDN--KPLTLSAVVTDIKSHEQKLQSNN 364 (451)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECCSHHH-HHHHHHTSCTTCEEEEEEEETT--EEEEEEEECBCHHHHHHHHHHHS
T ss_pred cCCCChHHHcCCCC-CCEEEEECCEEcCCHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEEEEccCCcccccccccc
Confidence 46899999999999 99999999999999965 555555 467789999999988 445554443210 00 0
Q ss_pred cceeeeEEee--ec--------------c--cc-c---c-cceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 72 QGLLGVSIRF--CS--------------F--EG-A---N-ENVWHILDQDN------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 72 ~~~lGl~~~~--~~--------------~--~~-~---~-~~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
...+|+.+.. +. + .+ + + ..|-.|++||+ ++|.+++++ +++++.|+|+|
T Consensus 365 ~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R-- 441 (451)
T 3pv2_A 365 PFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLR-- 441 (451)
T ss_dssp TTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEE--
T ss_pred ccccccccccCChhHhcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEE--
Confidence 0122332211 00 0 01 0 0 11224999998 788999987 78899999998
Q ss_pred CCeEEEEEE
Q psy18011 123 TQDVRTVNI 131 (163)
Q Consensus 123 ~~~~~~v~v 131 (163)
+++.+.+++
T Consensus 442 ~g~~~~v~l 450 (451)
T 3pv2_A 442 GPGSMYLLV 450 (451)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEe
Confidence 666666665
No 6
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.49 E-value=8.6e-15 Score=105.15 Aligned_cols=120 Identities=20% Similarity=0.287 Sum_probs=76.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECCCceEEEEEEccCCCCCCcceeeeEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSI 79 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl~~ 79 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ ....++....+.++.++++|.+ +.+++++.+.. ...+|+.+
T Consensus 34 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~--~~~~v~l~~~~----~~~lG~~~ 106 (166)
T 1w9e_A 34 VQANSPASLVGLRF-GDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRP--FERTITMHKDS----TGHVGFIF 106 (166)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCT--TCEEEEEECCT----TSCCSEEE
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCC--CcEEEEEecCC----CCcEeEEE
Confidence 46899999999999 99999999999999987 4556666777789999995543 33566665431 34577765
Q ss_pred eee---cc--cc----cc-cceEEEeeeCchHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEec
Q psy18011 80 RFC---SF--EG----AN-ENVWHILDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 133 (163)
Q Consensus 80 ~~~---~~--~~----~~-~~~~~I~~v~~~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p 133 (163)
... .+ .+ ++ ..+-.|+++|+..+..+ +++++.+.+.| ++..+.++++|
T Consensus 107 ~~g~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~----~~~~v~~~v~r--~g~~~~l~v~~ 164 (166)
T 1w9e_A 107 KNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGL----KDSQIADILST--SGTVVTITIMP 164 (166)
T ss_dssp ETTEEEEECTTSHHHHTTCCSSEEEEEETTEECTTC----CHHHHHHHHHH--SCSEEEEEEEE
T ss_pred eCCEEEEEccCCHHHHcCCCCCCEEEEECCEECCCC----ChHHHHHHHhh--CCCEEEEEEEE
Confidence 311 00 01 11 12335999998322111 33444555555 44455556555
No 7
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.48 E-value=6.7e-13 Score=97.59 Aligned_cols=114 Identities=18% Similarity=0.295 Sum_probs=79.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCC-CCeEEEEEEECCCc------eEEEEEEccCCCCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGI-DKELKMAVYSSKTQ------DVRTVNITPSNSWG 70 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~-~~~v~l~v~r~~~~------~~~~v~~~~~~~~~ 70 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ +..++.... +.++.+++.|++.. ...++.+...
T Consensus 43 v~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~-~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~---- 116 (196)
T 1p1d_A 43 IEADSPAERCGVLQI-GDRVMAINGIPTEDSTFEE-ANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKK---- 116 (196)
T ss_dssp CCTTSHHHHTSCCCS-SCCEEEETTBCSTTSCHHH-HHHHHHTCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCC----
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCC----
Confidence 56899999999 999 9999999999999 5754 667777654 78999999997632 2244444321
Q ss_pred CcceeeeEEeeec--------c------cc----cc--cceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 71 GQGLLGVSIRFCS--------F------EG----AN--ENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 71 ~~~~lGl~~~~~~--------~------~~----~~--~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
....+|+.+.... . .+ ++ ..+-.|++||+ ++|.++++++ ++++.|+|+|+
T Consensus 117 ~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 194 (196)
T 1p1d_A 117 HSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKD 194 (196)
T ss_dssp SSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECC
T ss_pred CCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeC
Confidence 1234666553320 0 01 11 12335999998 6788888876 89999999984
No 8
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.47 E-value=1.3e-12 Score=96.43 Aligned_cols=119 Identities=16% Similarity=0.232 Sum_probs=76.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh---HHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccCCCCCCcceee
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN---DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLG 76 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~---d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lG 76 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++...++..+.|+|+|++......+++..... ....||
T Consensus 52 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~~--~~~~lG 128 (206)
T 3r0h_A 52 VYPEGQVAADKRLKI-FDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPPELEKFNVDLMKK--AGKELG 128 (206)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSCCEEEEEEEEECC--TTCCCC
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccCCCcEEEEEEecC--CCCccC
Confidence 46899999998 999 9999999999999932 2233445555555599999997655444444432211 123467
Q ss_pred eEEeeec-------c--cc----cc--cceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 77 VSIRFCS-------F--EG----AN--ENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 77 l~~~~~~-------~--~~----~~--~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
+.+.... + .+ ++ ..|-+|++||+ +++.+++++ +++++.|+|.|...
T Consensus 129 ~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 129 LSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRPKP 197 (206)
T ss_dssp EEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEECC
T ss_pred eEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 6654211 0 01 11 11234999998 456677765 67899999998543
No 9
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.43 E-value=5.7e-13 Score=88.05 Aligned_cols=75 Identities=17% Similarity=0.312 Sum_probs=55.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEEccCC-CCCCcceeeeE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPSN-SWGGQGLLGVS 78 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~~~~~-~~~~~~~lGl~ 78 (163)
|.++|||++ ||++ ||+|++|||+++.+|.+ +..++.. ..++++.+++.|++ +..++++.+.. .......+|+.
T Consensus 14 V~~~spA~~-GL~~-GD~I~~Ing~~v~~~~d-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~~~~~~~~~iGi~ 88 (100)
T 3i18_A 14 VKDDVPAAD-VLHA-GDLITEIDGNAFKSSQE-FIDYIHSKKVGDTVKINYKHGD--KNEQADIKLTAIDKKGTPGIGIT 88 (100)
T ss_dssp ECTTSGGGG-TCCT-TCEEEEETTBCCSSHHH-HHHHHHTSCTTCEEEEEEEETT--EEEEEEEECEECSTTCCEECSEE
T ss_pred eCCCCchHH-CCCC-CCEEEEECCEECCCHHH-HHHHHHhCCCCCEEEEEEEECC--EEEEEEEEEecCCCCCCcEEeEE
Confidence 468999995 9999 99999999999999965 6666664 46789999999987 44555554331 11234578887
Q ss_pred Ee
Q psy18011 79 IR 80 (163)
Q Consensus 79 ~~ 80 (163)
+.
T Consensus 89 ~~ 90 (100)
T 3i18_A 89 LV 90 (100)
T ss_dssp EG
T ss_pred Ee
Confidence 53
No 10
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.41 E-value=1.3e-13 Score=89.74 Aligned_cols=74 Identities=18% Similarity=0.286 Sum_probs=55.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhC-CCCeEEEEEEECCCceEEEEEEccCC--CCCCcceeee
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSN--SWGGQGLLGV 77 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~-~~~~v~l~v~r~~~~~~~~v~~~~~~--~~~~~~~lGl 77 (163)
|.++|||++ ||++ ||+|++|||+++.+|.+ +..++... +++++.++|.|++ +..++++.+.. ...+...||+
T Consensus 8 V~~~spA~~-GL~~-GD~I~~InG~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~~~~~~gr~~~~~ 82 (91)
T 2kjp_A 8 VVENMPAKG-KIEV-GDKIISADGKNYQSAEK-LIDYISSKKAGDKVTLKIEREE--KEKRVTLTLKQFPDEPDRAGIGV 82 (91)
T ss_dssp CCCSSCCSS-CCCS-SCEEEEETTBCCSSHHH-HHHHHSSCCSSCEECEEEESSS--CEECCCEECCCCTTCTTSCSCCS
T ss_pred ECCCChHHH-cCCC-CCEEEEECCEECCCHHH-HHHHHHcCCCCCEEEEEEEECC--EEEEEEEEEeccCCCCCcceeEE
Confidence 578999999 9999 99999999999999964 77777665 6789999999987 44555554432 1222355666
Q ss_pred EE
Q psy18011 78 SI 79 (163)
Q Consensus 78 ~~ 79 (163)
++
T Consensus 83 ~~ 84 (91)
T 2kjp_A 83 SL 84 (91)
T ss_dssp CC
T ss_pred ee
Confidence 53
No 11
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.40 E-value=1.2e-12 Score=84.73 Aligned_cols=61 Identities=28% Similarity=0.323 Sum_probs=51.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++....++.+.+++.|++ +..++.+.+
T Consensus 11 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~-~~~~l~~~~g~~v~l~v~R~g--~~~~~~v~~ 71 (91)
T 2zpm_A 11 VQPNSAASXAGLQA-GDRIVXVDGQPLTQWVT-FVMLVRDNPGXSLALEIERQG--SPLSLTLIP 71 (91)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECCCHHH-HHHHHHHCTTCCEEEEEEETT--EEEEEEECC
T ss_pred ECCCChHHhcCCCC-CCEEEEECCeEcCCHHH-HHHHHhcCCCCeEEEEEEECC--eEEEEEEEE
Confidence 46899999999999 99999999999999965 666666567788999999987 556666654
No 12
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.38 E-value=6e-13 Score=85.71 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=46.2
Q ss_pred CCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEE
Q psy18011 2 QDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNI 63 (163)
Q Consensus 2 ~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~ 63 (163)
.|+|||++|||++ ||+|++|||+++.+|.+ +..++.. ..++++.++++|++ +..++.+
T Consensus 27 ~~~s~A~~aGl~~-GD~I~~ing~~v~~~~d-~~~~~~~~~~g~~v~l~v~R~g--~~~~~~v 85 (87)
T 2i6v_A 27 KDPVLFESIGLQD-GDMAVALNGLDLTDPNV-MNTLFQSMNEMTEMSLTVERDG--QQHDVYI 85 (87)
T ss_dssp SCHHHHHHTTCCT-TCEEEEETTEETTCHHH-HHHHHHTGGGCSEEEEEEEETT--EEEEEEE
T ss_pred CCCCHHHHCCCCC-CCEEEEECCEECCCHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEE
Confidence 4556779999999 99999999999999965 5567764 35688999999987 4454443
No 13
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.38 E-value=1.3e-11 Score=90.91 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=74.9
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECCCc----------eEEEEEEccCC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSKTQ----------DVRTVNITPSN 67 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~~~----------~~~~v~~~~~~ 67 (163)
|.++|||++| ||++ ||+|++|||+++.+| .+ +..++.. .+.++.|+|.|++.. +..++++...
T Consensus 40 v~~~spA~~aggl~~-GD~I~~vng~~v~~~~~~~-~~~~~~~-~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~- 115 (200)
T 2qt5_A 40 LRQGGIAARSDQLDV-GDYIKAVNGINLAKFRHDE-IISLLKN-VGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKE- 115 (200)
T ss_dssp ECTTSHHHHTTSCCT-TCEEEEETTEECTTSCHHH-HHHHHHT-CCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECB-
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHh-CCCeEEEEEeccCCCcccCCCccceeEEEEEEecC-
Confidence 4689999999 9999 999999999999999 55 3355544 467899999986421 3344443221
Q ss_pred CCCCcceeeeEEeee----------------cccc----cc--cceEEEeeeCc--------hHHHHHHHccCCCeEEEE
Q psy18011 68 SWGGQGLLGVSIRFC----------------SFEG----AN--ENVWHILDQDN--------DTLKELLKNGIDKELKMA 117 (163)
Q Consensus 68 ~~~~~~~lGl~~~~~----------------~~~~----~~--~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~ 117 (163)
...+|+.+... ...+ ++ ..+-.|++||+ +++.+++++ +++++.|+
T Consensus 116 ----~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~ 190 (200)
T 2qt5_A 116 ----GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLL 190 (200)
T ss_dssp ----TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEE
T ss_pred ----CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEE
Confidence 12344443210 0001 11 11225999987 778888887 88999999
Q ss_pred EEeC
Q psy18011 118 VYSS 121 (163)
Q Consensus 118 v~r~ 121 (163)
|.|+
T Consensus 191 v~R~ 194 (200)
T 2qt5_A 191 IEYD 194 (200)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9983
No 14
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.38 E-value=2e-12 Score=96.20 Aligned_cols=80 Identities=39% Similarity=0.725 Sum_probs=67.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccCCCCCCcceeeeEEe
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSIR 80 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl~~~ 80 (163)
|.++|||++|||++.||+|++|||+ +.+|.+ +..++....++++.|+|+|.+..+.+++++.|...|...+.||+.+.
T Consensus 119 V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~-l~~~l~~~~g~~v~l~v~r~~~~~~~~v~l~p~~~~~g~g~lG~~~~ 196 (209)
T 3rle_A 119 VESNSPAALAGLRPHSDYIIGADTV-MNESED-LFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIG 196 (209)
T ss_dssp ECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC-HHHHHHHTTTSCEEEEEEETTTTEEEEEEECCCTTSSSSSSSCEEEE
T ss_pred eCCCChHHHCCCCCCCCEEEECCCE-eCCHHH-HHHHHHhCCCCeEEEEEEECCceEEEEEEEEecCCCCCceeeeEEec
Confidence 4689999999999956999999998 999965 77788777888999999997655678888888766766789999887
Q ss_pred ee
Q psy18011 81 FC 82 (163)
Q Consensus 81 ~~ 82 (163)
+.
T Consensus 197 ~g 198 (209)
T 3rle_A 197 YG 198 (209)
T ss_dssp CS
T ss_pred Cc
Confidence 54
No 15
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.36 E-value=3.6e-12 Score=88.52 Aligned_cols=61 Identities=30% Similarity=0.482 Sum_probs=50.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhC-CCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~-~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||+ |||++ ||+|++|||+++.+|.+ +..++... .++++.++|.|++ +..++++.+.
T Consensus 64 V~~~spA~-aGL~~-GD~I~~inG~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~ 125 (134)
T 2l97_A 64 VQSNMPAN-GHLEK-YDVITKVDDKEIASSTD-LQSALYNHSIGDTIKITYYRNG--KEETTSIKLN 125 (134)
T ss_dssp CSTTSGGG-TTSCS-SCEEEEETTEECCCHHH-HHHHHHHSSTTCEEEEEEEETT--EEEEEEEECC
T ss_pred ECCCCchH-HCCCC-CCEEEEECCEEcCCHHH-HHHHHHhCCCCCEEEEEEEECC--EEEEEEEEEc
Confidence 57899999 99999 99999999999999965 66666554 6789999999988 5666666654
No 16
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.35 E-value=2.2e-12 Score=84.31 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=55.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhC-CCCeEEEEEEECCCceEEEEEEccCCC--CCCcceeee
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSNS--WGGQGLLGV 77 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~-~~~~v~l~v~r~~~~~~~~v~~~~~~~--~~~~~~lGl 77 (163)
|.++|||++ ||++ ||+|++|||+++.+|.+ +..++... .++++.+++.|++ +..++++.+... ..+...+|+
T Consensus 12 V~~~spA~~-GL~~-GD~Il~InG~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~~~~~~~~~~~~~ 86 (94)
T 2kl1_A 12 VLPNMPAAG-RLEA-GDRIAAIDGQPINTSEQ-IVSYVREKQAGDRVRVTFIRDR--KQHEAELVLKPFPHHPNQIGLGV 86 (94)
T ss_dssp CCTTSTTBT-TBCT-TCEEEEETTBCCCCHHH-HHHHHHHSCTTCCEEEEEEETT--EEEEEEECCCBCSSCTTCBCCSC
T ss_pred ECCCChHHh-CCCC-CCEEEEECCEECCCHHH-HHHHHHhCCCCCEEEEEEEECC--EEEEEEEEEeeCCCCCCCcEEEE
Confidence 568999999 9999 99999999999999965 66677654 6789999999988 556666654321 122345665
Q ss_pred EE
Q psy18011 78 SI 79 (163)
Q Consensus 78 ~~ 79 (163)
.+
T Consensus 87 ~~ 88 (94)
T 2kl1_A 87 TL 88 (94)
T ss_dssp C-
T ss_pred Ee
Confidence 43
No 17
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.34 E-value=1.9e-13 Score=112.37 Aligned_cols=123 Identities=17% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEEccCCCCC--------C
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPSNSWG--------G 71 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~--------~ 71 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++.. ..++++.++|+|++ +..++++.+..... .
T Consensus 293 V~~gspA~~AGL~~-GDvI~~inG~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~~~~~~~~~~~~~ 368 (448)
T 1ky9_A 293 VLPNSSAAKAGIKA-GDVITSLNGKPISSFAA-LRAQVGTMPVGSKLTLGLLRDG--KQVNVNLELQQSSQNQVDSSSIF 368 (448)
T ss_dssp CTTCSSSTTTTCCT-TCEECBSSSSBCCSSHH-HHHHTTSSBTTCCCEEEEESSS--CEEECCCC---------------
T ss_pred eccCCHHHHcCCCC-CCEEEEECCEEcCCHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEEEEecCCCccccccccc
Confidence 57899999999999 99999999999999965 6666654 56788999999987 44554443321000 0
Q ss_pred cceeeeEEeee---------ccc--c-ccc----ceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEE
Q psy18011 72 QGLLGVSIRFC---------SFE--G-ANE----NVWHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTV 129 (163)
Q Consensus 72 ~~~lGl~~~~~---------~~~--~-~~~----~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v 129 (163)
...+|+.+... .+. + +.. .+-.|++||+ ++|.+++++.++ ++.|+|.| ++..+.+
T Consensus 369 ~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l~v~R--~g~~~~~ 445 (448)
T 1ky9_A 369 NGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLALNIQR--GDSTIYL 445 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEEEEEEE--CCEEEEE
Confidence 12345544210 000 1 111 1224899998 778888887655 89999988 4444444
Q ss_pred E
Q psy18011 130 N 130 (163)
Q Consensus 130 ~ 130 (163)
+
T Consensus 446 ~ 446 (448)
T 1ky9_A 446 L 446 (448)
T ss_dssp -
T ss_pred E
Confidence 4
No 18
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.33 E-value=3.7e-12 Score=84.81 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=46.3
Q ss_pred CCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEE
Q psy18011 2 QDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNI 63 (163)
Q Consensus 2 ~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~ 63 (163)
.|+|||++|||++ ||+|++|||++|.+|.+ +..++.. ..++++.++|+|++ +..++++
T Consensus 45 ~pas~A~~aGl~~-GDvI~~ing~~v~~~~d-~~~~~~~~~~g~~v~l~v~R~g--~~~~~~v 103 (105)
T 2i4s_A 45 KDPVLFESIGLQD-GDMAVALNGLDLTDPNV-MNTLFQSMNEMTEMSLTVERDG--QQHDVYI 103 (105)
T ss_dssp SCTHHHHHHTCCT-TCEEEEETTEETTSTTH-HHHHHHHHTTCSEEEEEEEETT--EEEEEEE
T ss_pred CCCCHHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHhcCCCCeEEEEEEECC--EEEEEEE
Confidence 3456679999999 99999999999999976 5566654 56789999999987 4455443
No 19
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.26 E-value=7.6e-12 Score=80.94 Aligned_cols=52 Identities=25% Similarity=0.219 Sum_probs=44.4
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++.. .+..++.. .++++.++|.|++
T Consensus 34 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g 86 (91)
T 2pkt_A 34 VTPGSKAALANLCI-GDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSE 86 (91)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEEC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 46899999999999 99999999999999961 25556666 7789999999976
No 20
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.24 E-value=1.2e-11 Score=79.99 Aligned_cols=51 Identities=24% Similarity=0.419 Sum_probs=43.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++. ++. .+..++... ++++.|+|.|.+
T Consensus 34 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~-~~~~~l~~~-g~~v~l~v~r~~ 86 (91)
T 2vsp_A 34 VQKGGPADLAGLED-EDVIIEVNGVNVLDEPYE-KVVDRIQSS-GKNVTLLVCGKK 86 (91)
T ss_dssp CCTTSHHHHTTCCT-TCEEEEETTEECTTSCHH-HHHHHHTTS-CSEEEEEEEC--
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHH-HHHHHHHcC-CCEEEEEEEeCC
Confidence 57899999999999 9999999999999 774 466777665 789999999865
No 21
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=80.08 Aligned_cols=58 Identities=21% Similarity=0.354 Sum_probs=41.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEE
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNI 63 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~ 63 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ +..++.... ..+.+++.|++ +..++.+
T Consensus 30 v~~~s~A~~aG~l~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~-~~v~l~v~r~g--~~~~~~v 90 (92)
T 3cyy_A 30 ISQDSLAARDGNIQE-GDVVLKINGTVTENMSLTD-AKTLIERSK-GKLKMVVQRDE--RATLLNV 90 (92)
T ss_dssp ECTTCHHHHSCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHTTT-TEEEEEEEC-----------
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcCC-CcEEEEEEeCC--ceeeeeC
Confidence 46899999999 999 9999999999999 8855 667776544 48999999976 4344444
No 22
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=99.23 E-value=2.8e-11 Score=83.15 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=54.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCceEEEEEEccCCCCCCcceeeeEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSI 79 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl~~ 79 (163)
|.++|||++| |++ ||+|++|||+++.+|.+ +..++. ...++++.++| |++ + .++++.+.........+|+.+
T Consensus 32 V~~~spA~~a-L~~-GD~Il~InG~~v~~~~d-l~~~l~~~~~g~~v~l~V-R~g--~-~~v~l~~~~~~~~~~~lGi~~ 104 (125)
T 2hga_A 32 VVPGSPASKV-LTP-GLVIESINGMPTSNLTT-YSAALKTISVGEVINITT-DQG--T-FHLKTGRNPNNSSRAYMGIRT 104 (125)
T ss_dssp ECSSSGGGGT-SCT-TCEEEEETTEECSSHHH-HHHHHTTCCTTCEEEEEE-TTE--E-EEEECCBCSSSCCSCBCCEEE
T ss_pred ECCCChHHHh-cCC-CCEEEEECCEEcCCHHH-HHHHHHhcCCCCEEEEEE-ECC--E-EEEEEeccCCCCCceEEEEEe
Confidence 4689999999 999 99999999999999965 666666 35678999999 876 4 555554321122245789876
Q ss_pred e
Q psy18011 80 R 80 (163)
Q Consensus 80 ~ 80 (163)
.
T Consensus 105 ~ 105 (125)
T 2hga_A 105 S 105 (125)
T ss_dssp E
T ss_pred c
Confidence 4
No 23
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.22 E-value=2.1e-11 Score=78.20 Aligned_cols=51 Identities=18% Similarity=0.254 Sum_probs=44.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+ +. .+..++.... +++.++|.|++
T Consensus 33 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~-~~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 33 VAERGKAKDADLRP-GDIIVAINGESAEGMLHA-EAQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp ECSSSHHHHTTCCT-TCEEEEETTEESTTCCHH-HHHHHHHTCC-SSEEEEEEECC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHH-HHHHHHHcCC-CeEEEEEEecC
Confidence 46899999999999 99999999999999 54 4677777665 88999999975
No 24
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.22 E-value=3.1e-11 Score=81.15 Aligned_cols=60 Identities=27% Similarity=0.443 Sum_probs=49.4
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||+++.++.+ +..++.. ++++.+++.|++ +..++.+.+.
T Consensus 42 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~-~~~~l~~--~~~v~l~v~R~g--~~~~~~v~~~ 101 (113)
T 2pzd_A 42 VILGSPAHRAGLRP-GDVILAIGEQMVQNAED-VYEAVRT--QSQLAVQIRRGR--ETLTLYVTPE 101 (113)
T ss_dssp EBTTSHHHHHTCCT-TCEEEEETTEECCSHHH-HHHHHHH--CSSEEEEEEETT--EEEEEEECCE
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHhC--CCeEEEEEEECC--EEEEEEEEEe
Confidence 46899999999999 99999999999999865 6666665 578999999987 5566666543
No 25
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.21 E-value=2.8e-11 Score=77.71 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=42.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +....++... ++++.++|.|++
T Consensus 34 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 34 LKDGGKAAQANVRI-GDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 46899999999999 9999999999999993 2244555544 788999999865
No 26
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.21 E-value=1.3e-11 Score=80.57 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=44.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC-hHHHHHHHHhCCCCeEEEEEEECCCc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD-NDTLKELLKNGIDKELKMAVYSSKTQ 56 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~-~d~~~~~l~~~~~~~v~l~v~r~~~~ 56 (163)
|.++|||++|||++ ||+|++|||+++.++ .+.+..++... ++++.|+|.|++..
T Consensus 37 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 37 VDPGLPAKKAGMQA-GDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDPEAD 91 (96)
T ss_dssp ECTTSHHHHTTCCT-TEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECCCTT
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECCCCc
Confidence 46899999999999 999999999999993 13466667664 78999999997643
No 27
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.20 E-value=9.9e-12 Score=80.18 Aligned_cols=52 Identities=25% Similarity=0.342 Sum_probs=43.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEec--CCChHHHHHHHHh-CCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRL--DQDNDTLKELLKN-GIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v--~~~~d~~~~~l~~-~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++ .+|.+ +..++.. ..++++.++|.|++
T Consensus 35 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 35 VEAGSPAEFSQLQV-DDEIIAINNTKFSYNDSKE-WEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECCTTCHHH-HHHHHHHHHHHTEEEEEEEEEC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEEccCCCHHH-HHHHHHhcCCCCEEEEEEEeCC
Confidence 46899999999999 999999999999 78855 6566654 35688999999865
No 28
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.20 E-value=3.3e-11 Score=78.70 Aligned_cols=53 Identities=17% Similarity=0.350 Sum_probs=43.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++.+..........+.++.++|.|++
T Consensus 41 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 93 (97)
T 2w4f_A 41 VSEEGPAARAGVRV-GDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRER 93 (97)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCS
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCC
Confidence 46899999999999 999999999999998653222222346789999999976
No 29
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.19 E-value=2.8e-11 Score=81.25 Aligned_cols=60 Identities=28% Similarity=0.432 Sum_probs=48.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +...+. .++++.+++.|++ +..++.+.+.
T Consensus 42 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~-~~~~l~--~g~~v~l~v~R~g--~~~~~~v~~~ 101 (112)
T 2p3w_A 42 VAPNSPSQRGGIQD-GDIIVKVNGRPLVDSSE-LQEAVL--TESPLLLEVRRGN--DDLLFSIAPE 101 (112)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECCSHHH-HHHHHH--HCSSEEEEEEETT--EEEEEEECCE
T ss_pred ECCCChHHHCCCCC-CCEEEEECCEECCCHHH-HHHHHh--CCCeEEEEEEECC--EEEEEEEEEe
Confidence 46899999999999 99999999999999965 555553 3578999999987 5566666543
No 30
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=1.6e-11 Score=81.25 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=46.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||+++.+|.. ....++... ++++.|+|.|++ +..++.+.|.
T Consensus 36 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g--~~~~~~v~p~ 98 (103)
T 1wf7_A 36 LKDGGKASQAHVRI-GDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRAS--AAAKSEPVSS 98 (103)
T ss_dssp CCTTCHHHHTTCCT-TCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCCS--CCCCCCCCCC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC--CcCCCCCCCC
Confidence 57899999999999 99999999999999832 233444443 678999999977 3344444443
No 31
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.17 E-value=7.7e-11 Score=79.01 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=49.1
Q ss_pred CCCCChhhhcCC-ccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCCceEEEEE
Q psy18011 1 VQDNSPGQKAGL-EAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKTQDVRTVN 62 (163)
Q Consensus 1 V~~~SpA~~AGL-~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~ 62 (163)
|.++|||++||| ++ ||+|++|||+++.+ +++ +..++....++++.+++.|++.....++.
T Consensus 33 v~~~spA~~aGll~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~g~~v~l~v~R~g~~~~~~~~ 95 (112)
T 1qau_A 33 LIRGGAAEQSGLIQA-GDIILAVNDRPLVDLSYDS-ALEVLRGIASETHVVLILRGPEGFTTHLE 95 (112)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEECTTSCHHH-HHHHHHHSCSSSEEEEEEECCTTSEEEEE
T ss_pred eCCCChHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCcEEEEEEeCCcccceEee
Confidence 468999999998 99 99999999999999 754 66777766778999999998755444443
No 32
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=4.9e-11 Score=77.60 Aligned_cols=51 Identities=20% Similarity=0.301 Sum_probs=43.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++ .+ +..++.... +++.++|+|++
T Consensus 37 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~-~~v~l~v~R~g 89 (94)
T 1vb7_A 37 VTERGKAEAADLRP-GDIIVAINGQSAENMLHAE-AQSKIRQSA-SPLRLQLDRSS 89 (94)
T ss_dssp BCTTSSHHHHTCCT-TCEEEEETTEECTTCCHHH-HHHHHHTCC-SSEEEEEECCC
T ss_pred ECCCCHHHHCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCC-CcEEEEEEECC
Confidence 46899999999999 999999999999997 55 556676655 88999999976
No 33
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.17 E-value=6.7e-11 Score=81.03 Aligned_cols=53 Identities=26% Similarity=0.371 Sum_probs=43.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+| .+....+.....++++.|+|.|++
T Consensus 58 V~~gspA~~aGL~~-GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 58 VLEDSPAAKEGLEE-GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp ECTTCHHHHTTCCT-TEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 46899999999999 999999999999999 554433444467789999999864
No 34
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.16 E-value=3.7e-11 Score=83.91 Aligned_cols=54 Identities=19% Similarity=0.322 Sum_probs=44.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCCc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKTQ 56 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~~ 56 (163)
|.++|||++|||++ ||+|++|||+++.+ +. .+..++....++++.++|.|++..
T Consensus 71 V~~~spA~~aGL~~-GD~I~~vng~~v~~~~~~-~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 71 VSEGGPAEIAGLQI-GDKIMQVNGWDMTMVTHD-QARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHH-HHHHHHCCTTCSEEEEEEEECC--
T ss_pred ECCCCHHHHCCCCC-CCEEEEECCEEcCCCCHH-HHHHHHHhCCCCEEEEEEEECCEE
Confidence 46899999999999 99999999999995 54 466777666678999999998733
No 35
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=8.6e-11 Score=76.44 Aligned_cols=52 Identities=23% Similarity=0.188 Sum_probs=42.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. .....++.. .++++.|+|.|++
T Consensus 39 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 91 (94)
T 2eeg_A 39 VHAGSKAALAALCP-GDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSGP 91 (94)
T ss_dssp CCSSSHHHHTTCCT-TCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECCS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 57899999999999 9999999999999973 223344444 5678999999865
No 36
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.15 E-value=8.6e-11 Score=75.84 Aligned_cols=51 Identities=16% Similarity=0.413 Sum_probs=40.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHH-HHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDT-LKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~-~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++.+|.+. ...++. ..++.+.++|.|+
T Consensus 39 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 39 IRPAGPGDLGGLKP-YDRLLQVNHVRTRDFDCCLVVPLIA-ESGNKLDLVISRN 90 (91)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHHHHHHHH-TSTTEEEEEEEEC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHH-cCCCEEEEEEEeC
Confidence 46899999999999 999999999999998532 223344 3467899999874
No 37
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.15 E-value=5.2e-11 Score=79.89 Aligned_cols=51 Identities=25% Similarity=0.283 Sum_probs=43.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++.+| .+ +..++...+++++.++|.|.
T Consensus 51 V~~gspA~~AGL~~-GD~Il~VnG~~v~~~~~~d-v~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 51 LDPYCSASVAGARE-GDYIVSIQLVDCKWLTLSE-VMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHH-HHHHHHTTTTSCEEEEEESC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCeEEEEEEEC
Confidence 46899999999999 999999999999955 44 56777776667799999875
No 38
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.14 E-value=8.1e-11 Score=77.00 Aligned_cols=52 Identities=17% Similarity=0.375 Sum_probs=42.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +.+..++.. .++++.|+|.|++
T Consensus 44 V~~~spA~~aG~L~~-GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g 97 (98)
T 1ihj_A 44 IVPDSPAHLCGRLKV-GDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTFD 97 (98)
T ss_dssp ECTTSHHHHHCSCCT-TCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC-
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999982 235556655 6789999999965
No 39
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.14 E-value=8.2e-11 Score=75.84 Aligned_cols=51 Identities=20% Similarity=0.380 Sum_probs=43.3
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++ .+ +..++... +..+.+++.|.+
T Consensus 35 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~-~~~v~l~v~r~~ 87 (90)
T 2he4_A 35 VDPGSPAARSGLRA-QDRLIEVNGQNVEGLRHAE-VVASIKAR-EDEARLLVVGPS 87 (90)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTSCHHH-HHHHHTTS-SSEEEEEEECCC
T ss_pred ECCCChHHHCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCcEEEEEEccC
Confidence 46899999999999 999999999999998 44 55666654 688999999864
No 40
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.14 E-value=4.4e-11 Score=96.65 Aligned_cols=113 Identities=21% Similarity=0.258 Sum_probs=45.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEECCCceEEEEEEccCCCCCCcceeee
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGV 77 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl 77 (163)
|.+||||++|| |++ ||+|++|||+++.+|. +....++... .+.++.+++.|.+.. .++.+.... ....||+
T Consensus 239 V~~gspA~~aG~L~~-GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~--~~v~l~~~~---~~~~lG~ 312 (388)
T 3suz_A 239 MMNGGPAARSGKLSI-GDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPV--TTVLIKRPD---LKYQLGF 312 (388)
T ss_dssp CCCSSHHHHTCCCCT-TCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSC--C------------------
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccccccc--ceeeEeecC---CCCccce
Confidence 57899999999 999 9999999999999994 2355666654 456799999997643 444432111 1235666
Q ss_pred EEeeeccc-----c-ccc----ceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 78 SIRFCSFE-----G-ANE----NVWHILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 78 ~~~~~~~~-----~-~~~----~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.+....+. + +.. .|-+|++||+ +++.+++++ .++.+.|+|..
T Consensus 313 ~i~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~-~~~~v~L~V~p 372 (388)
T 3suz_A 313 SVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN-SVGEIHMKTMP 372 (388)
T ss_dssp -------------------------------------------------------------
T ss_pred EEecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEe
Confidence 54321110 1 111 1224999998 445555554 45556666643
No 41
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=73.98 Aligned_cols=50 Identities=28% Similarity=0.417 Sum_probs=41.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++.+| .+ +..++... +..+.++|.|+
T Consensus 30 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~-~~~v~l~v~R~ 81 (83)
T 2kv8_A 30 VMRGSPADFVGLRA-GDQILAVNEINVKKASHED-VVKLIGKC-SGVLHMVIAEG 81 (83)
T ss_dssp CCTTSTTTTTTCCT-TCEEEEETTEECSSCCHHH-HHHHHTTC-SSCEEEEEECC
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhC-CCeEEEEEEcC
Confidence 56899999999999 999999999999999 44 44555443 45689999885
No 42
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.14 E-value=7.5e-11 Score=93.92 Aligned_cols=61 Identities=21% Similarity=0.283 Sum_probs=50.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
|.++|||++|||++ ||+|++|||++|.+|.| +..++.. .+++++.|+|.|++ +.+++++.+
T Consensus 270 V~~~spA~~aGL~~-GDvI~~ing~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~l 331 (345)
T 3stj_A 270 VLPGSGSAKAGVKA-GDIITSLNGKPLNSFAE-LRSRIATTEPGTKVKLGLLRNG--KPLEVEVTL 331 (345)
T ss_dssp ECTTSHHHHHTCCT-TCEECEETTEECSCHHH-HHHHHHTSCTTCEEEEEEEETT--EEEEEEEEC
T ss_pred eccCChHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEEEE
Confidence 46899999999999 99999999999999965 6666654 57899999999988 445555543
No 43
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.14 E-value=6.2e-11 Score=77.40 Aligned_cols=51 Identities=22% Similarity=0.380 Sum_probs=44.4
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +.+ +..++.. .++++.|+|.|++
T Consensus 39 V~~~spA~~aG~l~~-GD~I~~ing~~v~~~~~~~-~~~~l~~-~g~~v~l~v~R~~ 92 (97)
T 2jil_A 39 VRPGGPADREGTIKP-GDRLLSVDGIRLLGTTHAE-AMSILKQ-CGQEAALLIEYDV 92 (97)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECSSCCHHH-HHHHHHH-SCSEEEEEEEEEC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 99999999999999 744 6677766 7789999999965
No 44
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=4.1e-11 Score=79.30 Aligned_cols=52 Identities=23% Similarity=0.305 Sum_probs=45.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|||++ ||+|++|||+++.+ |.+ +..++... ++++.|+|.|++.
T Consensus 36 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~-g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 36 ITPGSKAAAANLCP-GDVILAIDGFGTESMTHAD-AQDRIKAA-SYQLCLKIDRAET 89 (103)
T ss_dssp BCTTSTTGGGTCCT-TCBEEEETTEECSSCCHHH-HHHHHTTC-CSEEECEECCCTT
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhC-CCeEEEEEEECCe
Confidence 46899999999999 99999999999999 754 66777665 7899999999763
No 45
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.1e-10 Score=78.05 Aligned_cols=54 Identities=17% Similarity=0.321 Sum_probs=42.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|||++ ||+|++|||+++.++.+..........+.++.|+|.|++.
T Consensus 53 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 53 VSEEGPAARAGVRV-GDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESG 106 (110)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCc
Confidence 46899999999999 9999999999999964422222223367899999999763
No 46
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.13 E-value=9.2e-11 Score=74.70 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=40.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +....++.. .++++.++|.|++
T Consensus 32 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 32 ITPGSKAAQSQLSQ-GDLVVAIDGVNTDTMTHLEAQNKIKS-ASYNLSLTLQKSK 84 (85)
T ss_dssp ECTTSHHHHSSCCC-CSBEEEETTEECTTCCHHHHHHHHTT-CSSCEEEEEESCC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCcCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999999 9999999999999983 123344443 3456999998864
No 47
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.12 E-value=3.8e-11 Score=81.65 Aligned_cols=53 Identities=15% Similarity=0.288 Sum_probs=45.0
Q ss_pred CCC--CChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECCCc
Q psy18011 1 VQD--NSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSKTQ 56 (163)
Q Consensus 1 V~~--~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~~~ 56 (163)
|.+ +|||++|||++ ||+|++|||+++.+| .+ +..++... ++++.|+|.|++..
T Consensus 51 V~~~~~spA~~aGL~~-GD~Il~Vng~~v~~~~~~d-l~~~l~~~-g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 51 VNRMHISPNNRNAIHP-GDRILEINGTPVRTLRVEE-VEDAIKQT-SQTLQLLIEHDPVP 107 (118)
T ss_dssp CCTTTSCTTHHHHCCT-TCCEEEESSSBTTTSCHHH-HHHHHHCC-SSCEEEEEEECSSC
T ss_pred ecCCCCChHHHcCCCC-CCEEEEECCEECCCcCHHH-HHHHHHhC-CCEEEEEEEECCEE
Confidence 346 99999999999 999999999999999 76 55666655 78899999997733
No 48
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.12 E-value=1.2e-10 Score=74.17 Aligned_cols=51 Identities=12% Similarity=0.235 Sum_probs=41.1
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCC-CCeEEEEEEE
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGI-DKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~-~~~v~l~v~r 52 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++.... ++++.++|.|
T Consensus 32 v~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 32 LVLDGPAALDGKMET-GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 46899999999 999 9999999999999652 33556776543 6788888865
No 49
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.12 E-value=9.5e-11 Score=76.85 Aligned_cols=52 Identities=31% Similarity=0.389 Sum_probs=43.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|||++ ||+|++|||+++. +|.+ +..++. ..++.+.+++.|++.
T Consensus 41 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~-~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 41 VEDGSPAQEAGLRA-GDLITHINGESVLGLVHMD-VVELLL-KSGNKISLRTTALEN 94 (99)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHH-HHHHHH-HSCSEEEEEEECSCS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHh-cCCCEEEEEEEECCC
Confidence 46899999999999 9999999999999 6644 555555 356889999999653
No 50
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.11 E-value=1.1e-10 Score=75.09 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=41.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +....++... ++++.++|.|++
T Consensus 34 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 86 (89)
T 2q3g_A 34 LTPGGKAAQAGVAV-GDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRAI 86 (89)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEEC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 46899999999999 9999999999999752 2244555543 678999999865
No 51
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.11 E-value=9.8e-11 Score=73.68 Aligned_cols=50 Identities=22% Similarity=0.356 Sum_probs=41.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ +..++.... ..+.+++.|+
T Consensus 28 v~~~s~A~~aG~l~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 28 ISQDSLAARDGNIQE-GDVVLKINGTVTENMSLTD-AKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp ECTTSHHHHHSSCCT-TCEEEEETTEECTTCCHHH-HHHHHHTST-TEEEEEEEC-
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHCCC-CeEEEEEEeC
Confidence 46899999999 999 9999999999999 8855 667776544 4889999875
No 52
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=1.6e-10 Score=76.00 Aligned_cols=52 Identities=17% Similarity=0.374 Sum_probs=42.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +.+..++...+ .++.|+|.|++
T Consensus 43 V~~~spA~~aGL~~-GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 95 (100)
T 1whd_A 43 VDSGGPAERAGLQQ-LDTVLQLNERPVEHWKCVELAHEIRSCP-SEIILLVWRVS 95 (100)
T ss_dssp CCTTSHHHHHTCCS-SCEEEEETTEECTTCCHHHHHHHHHHCS-SEEEEEEEECC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 57899999999999 9999999999999762 33556666544 45999999864
No 53
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.11 E-value=2.2e-10 Score=74.87 Aligned_cols=53 Identities=23% Similarity=0.394 Sum_probs=42.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++...+ +++.++|.|++.
T Consensus 37 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 91 (98)
T 2opg_A 37 VYEEGAACKDGRLWA-GDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRDEA 91 (98)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEECSS
T ss_pred ECCCChHHhCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcCCC
Confidence 46899999999 999 9999999999999874 23444555443 789999999763
No 54
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.10 E-value=1.5e-10 Score=91.15 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=50.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEE-CCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYS-SKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r-~~~~~~~~v~~~~ 65 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++.. .+++++.|+|+| ++ +.+++++.+
T Consensus 249 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~~g--~~~~~~v~~ 311 (324)
T 1y8t_A 249 VVAGGAAANAGVPK-GVVVTKVDDRPINSADA-LVAAVRSKAPGATVALTFQDPSG--GSRTVQVTL 311 (324)
T ss_dssp ECTTSTTTTTTCCT-TCEEEEETTEECCSHHH-HHHHHHTSCTTCEEEEEEECSSC--CEEEEEEEC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHhcCCCCEEEEEEEECCC--CEEEEEEEE
Confidence 46899999999999 99999999999999965 6666654 567899999999 87 445555543
No 55
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.10 E-value=2e-10 Score=75.08 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=42.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++. ..++.+.|+|.|++
T Consensus 37 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 37 LTKGGLAERTGAIHI-GDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQT 90 (97)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECCC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998652 33556665 46788999999876
No 56
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=6.1e-11 Score=81.10 Aligned_cols=52 Identities=21% Similarity=0.357 Sum_probs=45.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||++|.++.+ +..++....+..+.|+|.|++
T Consensus 55 V~~~spA~~aG~l~~-GD~I~~ing~~v~~~~~-~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 55 IDPNSIAAKDGRIRE-GDRIIQINGIEVQNREE-AVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp ECSSSHHHHTCCCCT-TCEEEEESSCBCCSHHH-HHHHHTCSSCCSCCEEEEECS
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCHHH-HHHHHHhCCCCEEEEEEEECC
Confidence 46899999999 999 99999999999999854 777777666788999999977
No 57
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.09 E-value=2.9e-11 Score=79.18 Aligned_cols=52 Identities=25% Similarity=0.427 Sum_probs=43.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+ +.+ +..++....+..+.+++.|++
T Consensus 40 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 40 VDPDSPAEASGLRA-QDRIVEVNGVCMEGKQHGD-VVSAIRAGGDETKLLVVDRET 93 (98)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHH-HHHHHHTTTTEEEEEECCHHH
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCcEEEEEEECCc
Confidence 46899999999999 99999999999998 754 667777666667778888754
No 58
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.3e-10 Score=74.74 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=43.7
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++ +||++ ||+|++|||+++. +|+ .+..++...++ ++.|++.|.+
T Consensus 32 V~~gspA~~~agL~~-GD~I~~Ing~~v~~~~~~-~~~~~l~~~~~-~v~l~v~r~~ 85 (88)
T 1kwa_A 32 IMHGGMIHRQGTLHV-GDEIREINGISVANQTVE-QLQKMLREMRG-SITFKIVPSY 85 (88)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEEGGGSCHH-HHHHHHHHCCE-EEEEEEECCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHH-HHHHHHhcCCC-cEEEEEECCc
Confidence 468999999 89999 9999999999999 785 47778877666 8999998864
No 59
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.09 E-value=1.9e-10 Score=76.25 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=41.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
|.++|||++|| |++ ||+|++|||+++.+... ....++.. .+..+.|+|.|++ ......+.|
T Consensus 40 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~--~~~~~~~~p 102 (105)
T 2awx_A 40 IIEGGAAHKDGKLQI-GDKLLAVNSVSLEEVTHEEAVTALKN-TSDFVYLKVAKPT--SMYISRHHH 102 (105)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCBHHHHHHHHHS-CCSEEEEEEECCC--C--------
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcCC--CCCCccccc
Confidence 46899999999 999 99999999999987432 23344443 3688999999976 334444443
No 60
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.09 E-value=4.1e-10 Score=74.90 Aligned_cols=62 Identities=18% Similarity=0.333 Sum_probs=45.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCC-ceEEEEEEc
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKT-QDVRTVNIT 64 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~-~~~~~v~~~ 64 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++.. .+.++.|+|.|++. ....++++.
T Consensus 39 V~~gspA~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~~~~~~v~l~ 103 (106)
T 4amh_A 39 IIEGGAAHKDGKLQI-GDKLLAVNNVALEEVTHEEAVTALKN-TSDFVYLKVAKPGSGEKIMEIKLI 103 (106)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECSSCCHHHHHHHHHS-CCSEEEEEEECCSSSCSEEEEEEE
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeCCCCCeEEEEEEe
Confidence 46899999999 999 9999999999997642 223444544 45689999999763 334455543
No 61
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.09 E-value=2.4e-10 Score=74.22 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=41.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++.+ . .++. ...++++.|+|+|++
T Consensus 36 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~-~-~~~~~~~~g~~v~l~v~R~~ 87 (93)
T 2dls_A 36 VRPGGAAMKAGVKE-GDRIIKVNGTMVTNSSH-L-EVVKLIKSGAYVALTLLGSS 87 (93)
T ss_dssp ECSSSTTTTTTCCS-SCEEEEETTEECSSSCH-H-HHHHHHTSSSEEEEEEECCC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCH-H-HHHHhhcCCCEEEEEEEECC
Confidence 46899999999999 99999999999999854 2 2332 235789999999865
No 62
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.09 E-value=1.6e-10 Score=90.94 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=50.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++.. .+++++.|+|+|++ +..++++.+
T Consensus 251 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~ 312 (318)
T 1te0_A 251 VSPDGPAANAGIQV-NDLIISVDNKPAISALE-TMDQVAEIRPGSVIPVVVMRDD--KQLTLQVTI 312 (318)
T ss_dssp ECTTSTTTTTCCCT-TCCEEEETTEECCCHHH-HHHHHHTSCTTCEEEEEEESSS--CEEEEEEEC
T ss_pred eCCCChHHHCCCCC-CCEEEEECCEEcCCHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEEEE
Confidence 46899999999999 99999999999999965 6677765 67889999999988 445555543
No 63
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=9.3e-11 Score=78.85 Aligned_cols=51 Identities=25% Similarity=0.331 Sum_probs=44.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++. +|.| +..++....++++.|+|.|.
T Consensus 43 V~~~spA~~aGL~~-GD~Il~InG~~v~~~~~~d-~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 43 LDPHCSASLAGAKE-GDYIVSIQGVDCKWLTVSE-VMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp CCTTSSHHHHHCCT-TCEEEEETTEECSSCCHHH-HHHHHHHTTTSEECEEEECE
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCceEEEEEEec
Confidence 56899999999999 9999999999999 8855 66788777777899999873
No 64
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.08 E-value=7.6e-11 Score=77.65 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=40.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHh--CCCCeEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKN--GIDKELKMAVY 51 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~--~~~~~v~l~v~ 51 (163)
|.+||||++|||++ ||+|++|||++|. +|+| +..++.. ..++++.|.|.
T Consensus 46 V~~gSpA~~AGL~~-GD~I~~Ing~~v~~~s~~d-v~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 46 VQRGSLAEVAGLQV-GRKIYSINEDLVFLRPFSE-VESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp ECTTSHHHHHTCCT-TCBEEEETTEESTTSCHHH-HHHHHHHHHHTTCCEEEEEE
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEEcCcCCHHH-HHHHHHHhhccCCeEEEEEe
Confidence 56899999999999 9999999999974 8855 6677765 46788888775
No 65
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=2.6e-10 Score=73.65 Aligned_cols=52 Identities=17% Similarity=0.378 Sum_probs=42.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +.+..++.. .+..+.++|.|.+
T Consensus 31 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 83 (91)
T 2f5y_A 31 VDSGGPAERAGLQQ-LDTVLQLNERPVEHWKCVELAHEIRS-CPSEIILLVWRMV 83 (91)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEECC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999999 9999999999999762 334555655 3457999999965
No 66
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=1.6e-10 Score=76.22 Aligned_cols=51 Identities=27% Similarity=0.370 Sum_probs=43.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +.+ +..++...++ .+.++|.|.+
T Consensus 46 V~~~spA~~aG~l~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~-~v~l~v~r~~ 99 (103)
T 2fcf_A 46 VLEDSPAGKNGTLKP-GDRIVEVDGMDLRDASHEQ-AVEAIRKAGN-PVVFMVQSII 99 (103)
T ss_dssp ECSSSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHTCCS-SEEEEEECCC
T ss_pred eCCCCcHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCC-cEEEEEEECC
Confidence 46899999999 999 99999999999998 644 6677776544 8999999865
No 67
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.08 E-value=2.5e-10 Score=73.22 Aligned_cols=49 Identities=22% Similarity=0.342 Sum_probs=39.3
Q ss_pred CCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHH-hCCCCeEEEEEEECC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLK-NGIDKELKMAVYSSK 54 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~-~~~~~~v~l~v~r~~ 54 (163)
++|||+ |||++ ||+|++|||+++.+| .+ +..++. ...++++.++|.|++
T Consensus 35 ~~spA~-aGl~~-GD~I~~vng~~v~~~~~~~-~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 35 VDSPRS-RGLKE-GDLIVEVNKKNVQALTHNQ-VVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp CC--CC-TTCCT-TCEEEEETTEECTTSCHHH-HHHHHHTSCTTCEEEEEEEEEC
T ss_pred cCChhH-hCCCC-CCEEEEECCEEcCCCCHHH-HHHHHHhCCCCCEEEEEEEeCC
Confidence 799999 99999 999999999999998 44 555565 356789999999865
No 68
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.08 E-value=1.4e-10 Score=79.51 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=50.0
Q ss_pred CCCCChhhhcCC-ccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 1 VQDNSPGQKAGL-EAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL-~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
|.++|||++||| ++ ||+|++|||+++.+ +.+ +..++....++.+.+++.|++. ..++.+.+
T Consensus 40 V~~~spA~~aGll~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~g~~v~l~v~R~g~--~~~~~~~~ 103 (127)
T 1b8q_A 40 LIRGGAAEQSGLIQA-GDIILAVNDRPLVDLSYDS-ALEVLRGIASETHVVLILRGPE--GFTTHLET 103 (127)
T ss_dssp CSSSSSHHHHSSCCT-TTCCCEETTEECSSSCHHH-HHHHHHSCCSSCEEEEEECCCC--SEEECCCC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCeEEEEEEeCCc--eEEEEEEE
Confidence 568999999999 99 99999999999998 754 6677776677899999999874 35555443
No 69
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.08 E-value=2.2e-10 Score=76.08 Aligned_cols=52 Identities=15% Similarity=0.260 Sum_probs=42.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||+ |||++ ||+|++|||+++.+|.+..........++++.++|.|++
T Consensus 46 V~~~spA~-agl~~-GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 46 VLKGGPAE-GQLQE-NDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKK 97 (107)
T ss_dssp ECTTSTTB-TTBCT-TCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEES
T ss_pred ECCCCchh-hCCCC-CCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECC
Confidence 46899999 99999 999999999999999653333333456788999999865
No 70
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.08 E-value=3.5e-10 Score=73.43 Aligned_cols=51 Identities=20% Similarity=0.424 Sum_probs=41.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+| .+ +..++.. .+..+.+.+.|.+
T Consensus 36 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~-~~~~~~~~~~r~~ 88 (95)
T 3r68_A 36 IEPGSPAEAAGLKN-NDLVVAVNGKSVEALDHDG-VVEMIRK-GGDQTTLLVLDKE 88 (95)
T ss_dssp CCTTSHHHHHTCCT-TEEEEEETTEECTTCCHHH-HHHHHHT-TTTEEEEEEEECC
T ss_pred ECCCCHHHHCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHh-CCCeEEEEEECCc
Confidence 57899999999999 999999999999998 44 5566666 3456666666654
No 71
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.08 E-value=2.9e-10 Score=74.20 Aligned_cols=51 Identities=22% Similarity=0.388 Sum_probs=41.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC-hHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD-NDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~-~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++.++ .+.+..++...+ .++.|+|.+.
T Consensus 44 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 44 VHESSPAQLAGLTP-GDTIASVNGLNVEGIRHREIVDIIKASG-NVLRLETLYG 95 (96)
T ss_dssp ECTTCHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEEECC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEEC
Confidence 46899999999999 999999999999995 244667777664 4899988763
No 72
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.08 E-value=2.1e-10 Score=76.40 Aligned_cols=52 Identities=17% Similarity=0.318 Sum_probs=43.1
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++.. .+..+.|+|.|++
T Consensus 51 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 104 (108)
T 2jre_A 51 LIPGSAAALDGRIEP-NDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRRL 104 (108)
T ss_dssp ECTTSHHHHHSSCCS-SEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEECC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999962 335556655 5688999999976
No 73
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=1.2e-10 Score=78.76 Aligned_cols=53 Identities=19% Similarity=0.210 Sum_probs=43.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|.+....+.....++++.|+|.|++
T Consensus 49 V~~~spA~~aGL~~-GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~ 101 (117)
T 1uit_A 49 VTVGSIAHQAGLEY-GDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNP 101 (117)
T ss_dssp ECTTSHHHHHTCCT-TCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46899999999999 999999999999999653333333456788999999876
No 74
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.07 E-value=3e-10 Score=77.37 Aligned_cols=53 Identities=15% Similarity=0.370 Sum_probs=44.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++... .+.++.|+|.|++
T Consensus 65 V~~gspA~~aG~L~~-GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 65 ILPRGAAIQDGRLKA-GDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp ECTTSHHHHHTCCCS-SSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 46899999999 999 9999999999999862 3455677664 4789999999865
No 75
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.07 E-value=2e-10 Score=74.72 Aligned_cols=52 Identities=12% Similarity=0.250 Sum_probs=41.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++.. ....++.. .+..+.+++.|++
T Consensus 36 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 36 LLEGGLAAQDGRLSS-NDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIARPG 89 (95)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEES
T ss_pred eCCCChHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 46899999999 999 99999999999987532 23334443 4688999999965
No 76
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=3.1e-10 Score=74.68 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=42.7
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++| ||++ ||+|++|||+++.++.+....++... ++.+.|+|.|++
T Consensus 42 V~~~spA~~agGL~~-GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~~ 94 (100)
T 2edp_A 42 IEDGGKAALSQKMRT-GDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRRRN 94 (100)
T ss_dssp CCTTSHHHHHTSCCT-TCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEECC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 5789999999 9999 99999999999998634355555543 578899999975
No 77
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.06 E-value=2.8e-10 Score=75.21 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=42.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++|||++ ||+|++|||+++.+.. +.+...+....++.+.++|.|
T Consensus 52 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 52 VSEGGPAEIAGLQI-GDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEE
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEc
Confidence 46899999999999 9999999999997642 235566666667889999987
No 78
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.06 E-value=3.7e-10 Score=73.19 Aligned_cols=52 Identities=23% Similarity=0.304 Sum_probs=41.1
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++... +..+.|+|.|++
T Consensus 40 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~g 93 (94)
T 2fe5_A 40 IIEGGAAQKDGRLQI-GDRLLAVNNTNLQDVRHEEAVASLKNT-SDMVYLKVAKPG 93 (94)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCBHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcCC
Confidence 46899999999 999 9999999999999873 2234445443 358999998864
No 79
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.05 E-value=2.9e-10 Score=75.40 Aligned_cols=52 Identities=23% Similarity=0.463 Sum_probs=43.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +.+..++.. .+.++.++|.|++
T Consensus 33 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 33 IEEGSPAEKAGLLD-GDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLDGD 85 (106)
T ss_dssp CCTTSHHHHTTCCT-TCEEEEETTEECTTSCHHHHHHHHHH-TTTEEEEEEECHH
T ss_pred eCCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEECC
Confidence 57899999999999 9999999999999985 135556653 5678999999865
No 80
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.05 E-value=4.2e-10 Score=75.25 Aligned_cols=53 Identities=15% Similarity=0.386 Sum_probs=43.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++... .+..+.|+|.|++
T Consensus 46 V~~~spA~~aG~l~~-GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 46 ILPRGAAIQDGRLKA-GDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp ECSSSHHHHHCSSCT-TCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECC
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998762 3355677654 4789999999976
No 81
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.05 E-value=8.8e-11 Score=78.45 Aligned_cols=52 Identities=13% Similarity=0.318 Sum_probs=42.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhC--CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNG--IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~--~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ |.+ ...++... ..+.+.|+|.|.+
T Consensus 40 V~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~~~~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 40 IMKGGAVAADGRIEP-GDMLLQVNDMNFENMSNDD-AVRVLRDIVHKPGPIVLTVAKSG 96 (108)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEETTSCCHHH-HHHHHHHHHTSSSCEEEEEECCC
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhcccCCCeEEEEEEeCC
Confidence 46899999999 999 99999999999998 644 55666544 3456999999865
No 82
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.6e-10 Score=79.32 Aligned_cols=53 Identities=17% Similarity=0.167 Sum_probs=42.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQ 56 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~ 56 (163)
|.++|||++|||++ ||+|++|||+++.++.+ ..++. ...++.+.|+|.|++..
T Consensus 53 V~~~spA~~aGL~~-GD~I~~vng~~v~~~~~--~~~~~~~~~~~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 53 VDPGSEAEGSGLKV-GDQILEVNGRSFLNILH--DEAVRLLKSSRHLILTVKDVGRL 106 (128)
T ss_dssp ECTTCHHHHHTCCT-TCEEEEETTEECSSCCH--HHHHHHHTTCSEEEEEEECCSCC
T ss_pred ECCCCHHHHCCCCC-CCEEEEECCEECCCCCH--HHHHHHHhcCCeEEEEEEECCcc
Confidence 46899999999999 99999999999999853 23332 23357899999998743
No 83
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.04 E-value=1.5e-10 Score=78.19 Aligned_cols=52 Identities=21% Similarity=0.388 Sum_probs=43.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC---CChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD---QDNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~---~~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ ...++.. .+..+.|+|.|++.
T Consensus 56 V~~~spA~~aG~l~~-GD~Il~ing~~v~~~~~~~~-~~~~l~~-~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 56 IQEGSVAHRDGRLKE-TDQILAINGQALDQTITHQQ-AISILQK-AKDTVQLVIARGSL 111 (117)
T ss_dssp CCTTSHHHHHCCCCT-TCEEEEETTEECCTTSCHHH-HHHHHHH-CCSEEEEEEESSCC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCCHHH-HHHHHHc-CCCEEEEEEEeCCc
Confidence 57899999999 999 9999999999998 7754 5566655 56789999999763
No 84
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=1.6e-10 Score=78.75 Aligned_cols=52 Identities=19% Similarity=0.406 Sum_probs=44.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCC-CCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGI-DKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~-~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ |.+ +..++.... ++++.|+|.|++
T Consensus 52 V~~~spA~~aG~L~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 52 IEADSPAERCGVLQI-GDRVMAINGIPTEDSTFEE-ANQLLRDSSITSKVTLEIEFDV 107 (122)
T ss_dssp ECTTSHHHHSCCCCT-TCCEEEETTEESSSSCHHH-HHHHHHHHTTTTCEEEEEEEEC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCCeEEEEEEECC
Confidence 46899999999 999 99999999999987 854 667776544 789999999965
No 85
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=3.9e-10 Score=74.11 Aligned_cols=51 Identities=24% Similarity=0.371 Sum_probs=41.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +.+...+.. +.++.|+|+|++
T Consensus 43 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g 94 (100)
T 2eeh_A 43 VEEGSSAERAGLCV-GDKITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRMG 94 (100)
T ss_dssp ECTTSHHHHHTCCS-SCEEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEECS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEECC
Confidence 46899999999999 9999999999999962 123333433 688999999976
No 86
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.04 E-value=3e-10 Score=74.19 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=40.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC-ChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ-DNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~-~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++.+ +.+....++. ..++++.|+|.|.
T Consensus 38 V~~~spA~~aG~L~~-GD~I~~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 38 LIQGQYPEIDSKLQR-GDIITKFNGDALEGLPFQVSYALFK-GANGKVSMEVTRP 90 (96)
T ss_dssp ECTTSCHHHHHHCCT-TCEEEEETTEECTTCCHHHHHHHHH-TCSSEEEEEEECC
T ss_pred eCCCChHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHh-cCCCcEEEEEEeC
Confidence 46899999999 999 99999999999987 4333333444 3456799999985
No 87
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.04 E-value=2.4e-10 Score=75.02 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=41.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++.+ |++ +..++... ++++.|+|.+.
T Consensus 43 V~~gspA~~aG~L~~-GD~Il~ING~~v~~~~~~~-~~~~l~~~-~~~v~L~V~~~ 95 (97)
T 2ejy_A 43 ILHGGMIHRQGSLHV-GDEILEINGTNVTNHSVDQ-LQKAMKET-KGMISLKVIPN 95 (97)
T ss_dssp ECSSSHHHHHTCCCT-TCEEEEETTBCCCSSCSHH-HHHHHHHC-CEEEEEEEECC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCeEEEEEEEC
Confidence 46899999999 999 99999999999996 854 66777765 46788888753
No 88
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.04 E-value=1.7e-10 Score=74.32 Aligned_cols=51 Identities=12% Similarity=0.240 Sum_probs=40.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCC-CCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGI-DKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~-~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ +..++.... +.++.++|.|.
T Consensus 34 V~~~spA~~aG~L~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 34 IVPLGAADTDGRLRS-GDELISVDGTPVIGKSHQL-VVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTSCHHH-HHHHHHHHHHHTEEEEEEEEC
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCCeEEEEEEec
Confidence 46899999999 999 9999999999995 4543 555665433 35899999885
No 89
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.03 E-value=4.1e-09 Score=88.21 Aligned_cols=117 Identities=19% Similarity=0.201 Sum_probs=78.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH---------HHHHHHH-hCCCCeEEEEEEECCCceEEEEEEccCCC--
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND---------TLKELLK-NGIDKELKMAVYSSKTQDVRTVNITPSNS-- 68 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d---------~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~~~~~-- 68 (163)
|.|+|||++| |++ ||+|++|||++|.+..+ .+..++. ..+|+++.++|+|+|+.++.++++.+...
T Consensus 284 V~~~spA~~a-l~~-GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~ 361 (539)
T 4fln_A 284 VEPTSDASKV-LKE-GDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLV 361 (539)
T ss_dssp ECTTSGGGGT-CCT-TCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSS
T ss_pred ccCCChHHhC-ccC-CCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCcccc
Confidence 5689999987 999 99999999999977543 1345554 57889999999999955555555543211
Q ss_pred ----CCC----cceeeeEEeeeccc---------------------------------------c----cc-cceEEEee
Q psy18011 69 ----WGG----QGLLGVSIRFCSFE---------------------------------------G----AN-ENVWHILD 96 (163)
Q Consensus 69 ----~~~----~~~lGl~~~~~~~~---------------------------------------~----~~-~~~~~I~~ 96 (163)
... ....|+........ + .+ .++..|++
T Consensus 362 ~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~ 441 (539)
T 4fln_A 362 PYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLK 441 (539)
T ss_dssp CSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEE
T ss_pred ccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEe
Confidence 000 12346554321100 0 00 12446888
Q ss_pred eCc------hHHHHHHHccCCCeEEEEEE
Q psy18011 97 QDN------DTLKELLKNGIDKELKMAVY 119 (163)
Q Consensus 97 v~~------~~l~~~v~~~~~~~v~l~v~ 119 (163)
||+ ++|.+++++..++.+.|...
T Consensus 442 vNg~~V~s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 442 FNGIPIRNIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp ETTEECCSHHHHHHHHHTCCSSEEEEEET
T ss_pred ECCEEcCCHHHHHHHHHHcCCCeEEEEEC
Confidence 888 89999999988888888763
No 90
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.03 E-value=5.3e-10 Score=73.79 Aligned_cols=52 Identities=15% Similarity=0.262 Sum_probs=40.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChHH-HHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDNDT-LKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d~-~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++... ....+. ..++.+.+++.|++
T Consensus 42 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 42 ILAGGPADLSGELRK-GDQILSVNGVDLRNASHEQAAIALK-NAGQTVTIIAQYKP 95 (104)
T ss_dssp ECTTSHHHHHCCCCT-TEEEEEETTEECTTCCHHHHHHHHH-TSCSEEEEEEEECH
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEECc
Confidence 46899999999 999 999999999999876532 222333 35678999999863
No 91
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.03 E-value=4.3e-10 Score=74.11 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=42.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +.+..++.. .+.++.+++.|.+
T Consensus 37 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 89 (102)
T 2d90_A 37 IEPGSPAEAAGLKN-NDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKE 89 (102)
T ss_dssp CCTTSTTTTTTCCT-TCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECSTT
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 56899999999999 9999999999999862 345556655 4678999998864
No 92
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=3.2e-10 Score=73.35 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=40.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++|||++ ||+|++|||+++. +|.+ +..++... ++.+.|+|.+
T Consensus 38 V~~~spA~~aGL~~-GD~Il~Ing~~v~~~~~~~-~~~~l~~~-g~~v~l~v~p 88 (90)
T 1y7n_A 38 LMRGGIAERGGVRV-GHRIIEINGQSVVATPHEK-IVHILSNA-VGEIHMKTMP 88 (90)
T ss_dssp ECTTSHHHHHTCCS-SCEEEEETTEECTTSCHHH-HHHHHHHC-CEEEEEEEEC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCeEEEEEEE
Confidence 46899999999999 9999999999994 6754 66777654 6788888875
No 93
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=3.2e-10 Score=74.93 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=42.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.. .+..+.|+|.|++
T Consensus 45 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 98 (104)
T 2djt_A 45 LLKDGPAQRCGRLEV-GDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRPL 98 (104)
T ss_dssp ECTTCHHHHHCSCCT-TCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 46899999999 999 9999999999999863 234455555 5688999999865
No 94
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=2e-10 Score=78.92 Aligned_cols=51 Identities=18% Similarity=0.360 Sum_probs=44.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHh-CCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKN-GIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~-~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ +..++.. ..++++.|+|.|+
T Consensus 56 V~~gspA~~aG~L~~-GD~Il~VnG~~v~~~s~~d-~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 56 LINKGAAASDGILQP-GDVLISVGHANVLGYTLRE-FLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp CCTTSSGGGCSSSCT-TCBEEEESSSCCTTCCHHH-HHHHHTSCCSSCEEEEEEESS
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEEcCCCCHHH-HHHHHhcCCCCCEEEEEEEEC
Confidence 57899999999 999 9999999999995 7754 6677775 4678999999986
No 95
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.02 E-value=6.7e-10 Score=72.27 Aligned_cols=52 Identities=15% Similarity=0.298 Sum_probs=41.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.. .+..+.|+|.|++
T Consensus 40 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 40 VIPQGAAESDGRIHK-GDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKGQ 93 (96)
T ss_dssp ECTTSHHHHTTCCCT-TCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECCS
T ss_pred eCCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 46899999999 999 9999999999999652 224455554 5688999999864
No 96
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.02 E-value=4.4e-10 Score=72.60 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=41.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+.. +....++.. .++++.|+|.|.+
T Consensus 36 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 36 IVKGGIADADGRLMQ-GDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGRIS 89 (92)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEccc
Confidence 46899999999 999 9999999999998742 334444544 4567999999864
No 97
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.02 E-value=4.9e-10 Score=74.63 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=40.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC-ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ-DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~-~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +.+....++. ..++++.++|.|..
T Consensus 32 V~~gspA~~aG~L~~-GD~Il~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 32 LIQGQYPEIDSKLQR-GDIITKFNGDALEGLPFQVCYALFK-GANGKVSMEVTRPK 85 (106)
T ss_dssp CCTTSCHHHHTTCCT-TCEEEEESSCBCSSSCHHHHHHHHH-SCBSCEEEEEEECC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHh-CCCCeEEEEEEeCC
Confidence 57899999999 999 99999999999987 3333333343 34467999999853
No 98
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.5e-10 Score=76.24 Aligned_cols=51 Identities=29% Similarity=0.353 Sum_probs=41.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ . .++. ...++++.++|.|++
T Consensus 42 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~-~-~~~~~~~~~~~v~l~v~R~g 93 (101)
T 1uez_A 42 VEPGSLAEKEGLRV-GDQILRVNDKSLARVTH-A-EAVKALKGSKKLVLSVYSAG 93 (101)
T ss_dssp ECTTSHHHHHTCCS-SCCEEEETTEECSSCCH-H-HHHHHSSSSSSCCEEECCCC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCcCH-H-HHHHhhcCCCeEEEEEEECC
Confidence 46899999999999 99999999999999965 3 3333 344567889998865
No 99
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.02 E-value=6.2e-10 Score=75.36 Aligned_cols=53 Identities=11% Similarity=0.236 Sum_probs=42.1
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|.+.....+....++.+.+++.|.+
T Consensus 45 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 45 ILAGGPADLSGELRK-GDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp ECTTSHHHHHSCCCT-TEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46899999999 999 999999999999999643322233345678999999854
No 100
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.02 E-value=5.3e-10 Score=72.08 Aligned_cols=53 Identities=21% Similarity=0.347 Sum_probs=39.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +.+..++...++..+.+.+.|++
T Consensus 34 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~~ 87 (91)
T 1g9o_A 34 VEPGSPAEKAGLLA-GDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET 87 (91)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred ECCCCHHHHCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCCc
Confidence 46899999999999 9999999999999842 33556666555444455555543
No 101
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.01 E-value=5.6e-10 Score=75.09 Aligned_cols=52 Identities=23% Similarity=0.477 Sum_probs=43.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +.+..++... ++++.|+|.|++
T Consensus 45 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 97 (114)
T 2edz_A 45 IEEGSPAEKAGLLD-GDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDGD 97 (114)
T ss_dssp CCTTCTTGGGTCCT-TCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECHH
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 57899999999999 9999999999999861 2355566553 789999999965
No 102
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.01 E-value=7e-10 Score=73.97 Aligned_cols=50 Identities=18% Similarity=0.371 Sum_probs=41.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCC--hHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQD--NDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~--~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|||++ ||+|++|||+++.+| .+ +..++... ++.+.|+|.|.
T Consensus 52 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~-~~~~l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 52 VDEGGVAWRAGLRM-GDFLIEVNGQNVVKVGHRQ-VVNMIRQG-GNTLMVKVVMV 103 (109)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHH-HHHHHHHT-TTEEEEEEEEE
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhC-CCEEEEEEEEC
Confidence 46899999999999 999999999999999 55 44566554 56788988874
No 103
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=7.8e-10 Score=74.47 Aligned_cols=52 Identities=19% Similarity=0.379 Sum_probs=42.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.... ..+.|+|.|++
T Consensus 50 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 103 (116)
T 2dm8_A 50 VYEEGAAARDGRLWA-GDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRDE 103 (116)
T ss_dssp CCSSSHHHHHTCCCT-TCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECCS
T ss_pred ECCCChHHhCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCC
Confidence 57899999999 999 9999999999999862 33445555444 78999999976
No 104
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.01 E-value=6.1e-10 Score=73.19 Aligned_cols=52 Identities=17% Similarity=0.261 Sum_probs=41.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.. .+..+.|+|.|++
T Consensus 44 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 97 (101)
T 2jik_A 44 IKENGAAALDGRLQE-GDKILSVNGQDLKNLLHQDAVDLFRN-AGYAVSLRVQHRL 97 (101)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECSSCCHHHHHHHHHT-CCSEEEEEEEEES
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999873 223345544 3678999999865
No 105
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=8.8e-11 Score=78.52 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=45.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|| |++ ||+|++|||+++.++. .....++.. .+..+.|+|.|++ +..++.+.|.
T Consensus 43 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~--~~~~~~v~~~ 106 (110)
T 1um1_A 43 LLPGSPAAADGRLSL-GDRILEVNGSSLLGLGYLRAVDLIRH-GGKKMRFLVAKSD--VETAKKIHSG 106 (110)
T ss_dssp ECTTSHHHHHSCCCT-TCEEEEESSCBCSSCCHHHHHHHHHT-CCSEEEEEEECCC--HHHHHHHSSC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC--cceeEEEEec
Confidence 46899999999 999 9999999999998642 223344444 4688999999976 3334444443
No 106
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=5.6e-10 Score=75.61 Aligned_cols=51 Identities=24% Similarity=0.334 Sum_probs=41.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ ...++...+ .++.|+|.|++
T Consensus 60 V~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~~~-~~v~l~v~R~g 113 (117)
T 2fne_A 60 VFAKGAASEDGRLKR-GDQIIAVNGQSLEGVTHEE-AVAILKRTK-GTVTLMVLSSD 113 (117)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHHCC-SSEEEEEEECS
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcCC-CeEEEEEEeCC
Confidence 46899999999 999 9999999999999 6643 556666544 45999999976
No 107
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=2.4e-10 Score=75.56 Aligned_cols=52 Identities=17% Similarity=0.286 Sum_probs=42.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCC-CCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGI-DKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~-~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +. .+..++.... +..+.|+|.|++
T Consensus 41 V~~~spA~~aG~L~~-GD~Il~ing~~v~~~~~~-~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 41 VIAMGSADRDGRLHP-GDELVYVDGIPVAGKTHR-YVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp ECTTSTTGGGTCCCT-TCEEEEETTEECTTSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred eCCCChHHhCCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHhCCCCCcEEEEEEeCC
Confidence 46899999999 999 99999999999976 53 3556665543 688999999865
No 108
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.00 E-value=5e-10 Score=76.53 Aligned_cols=51 Identities=27% Similarity=0.361 Sum_probs=42.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +.+ +..++...+ .++.|+|.|..
T Consensus 66 V~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~~~-~~v~l~v~r~~ 119 (123)
T 2iwq_A 66 VLEDSPAGKNGTLKP-GDRIVEVDGMDLRDASHEQ-AVEAIRKAG-NPVVFMVQSII 119 (123)
T ss_dssp ECSSSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHHCC-SSEEEEEECCC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcCC-CeEEEEEEECC
Confidence 46899999999 999 99999999999988 644 667776654 48999998864
No 109
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=4.7e-10 Score=74.26 Aligned_cols=50 Identities=26% Similarity=0.425 Sum_probs=42.3
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+ +.+ +..++.. ++.+.|+|.|+.
T Consensus 48 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~-~~~~l~~--~~~v~l~v~r~~ 99 (104)
T 1wi2_A 48 VIPDSDAHRAGLQE-GDQVLAVNDVDFQDIEHSK-AVEILKT--AREISMRVRFFS 99 (104)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECSSCCHHH-HHHHHHH--SSSEEEEEECCC
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHhC--CCEEEEEEEECC
Confidence 46899999999999 99999999999998 744 5566665 578999998854
No 110
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.00 E-value=1.1e-09 Score=70.46 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=39.2
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++| ||++ ||+|++|||+++.++.. ....++.. .+.++.++|.|
T Consensus 37 V~~~spA~~aggl~~-GD~I~~ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 88 (90)
T 1qav_A 37 IFKGLAADQTEALFV-GDAILSVNGEDLSSATHDEAVQALKK-TGKEVVLEVKY 88 (90)
T ss_dssp ECTTSHHHHTTCCCT-TEEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred ECCCCHHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE
Confidence 4689999999 9999 99999999999987532 23344444 35779999887
No 111
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.99 E-value=7.5e-10 Score=87.35 Aligned_cols=60 Identities=27% Similarity=0.443 Sum_probs=50.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||++|.+|.+ +...+.. ++++.|+|+|++ +.+++++.+.
T Consensus 263 V~~~spA~~aGl~~-GDvI~~ing~~v~~~~~-l~~~l~~--~~~v~l~v~R~g--~~~~~~v~~~ 322 (325)
T 1lcy_A 263 VILGSPAHRAGLRP-GDVILAIGEQMVQNAED-VYEAVRT--QSQLAVQIRRGR--ETLTLYVTPE 322 (325)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECCSHHH-HHHHHTT--CSSEEEEEEETT--EEEEEEECCE
T ss_pred eCcCChHHHCCCCC-CCEEEEECCEEcCCHHH-HHHHHhC--CCeEEEEEEECC--EEEEEEEEEe
Confidence 46899999999999 99999999999999965 6666654 478999999988 6667766543
No 112
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=4.3e-10 Score=74.11 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=41.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++. ..+..+.|+|.|++
T Consensus 43 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~~ 96 (103)
T 1wfv_A 43 LAEDGPAIRNGRMRV-GDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRGT 96 (103)
T ss_dssp BCTTSHHHHHCSSCT-TCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECTT
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEECC
Confidence 46899999999 999 9999999999999863 22334444 34678999999875
No 113
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.99 E-value=6.7e-10 Score=73.74 Aligned_cols=51 Identities=22% Similarity=0.413 Sum_probs=42.3
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++. +|.+ +..++.. .++.+.|++.|.+
T Consensus 50 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~-~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 50 VLPGGAADRAGVRK-GDRILEVNGVNVEGATHKQ-VVDLIRA-GEKELILTVLSVE 102 (107)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHH-HHHHHHH-CSSEEEEEEECSS
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHc-CCCEEEEEEEcCC
Confidence 46899999999999 9999999999999 6644 5566664 4678999999864
No 114
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=9.4e-10 Score=75.03 Aligned_cols=53 Identities=19% Similarity=0.337 Sum_probs=43.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +.+..++... .+..+.|+|.|++
T Consensus 51 V~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 51 VIPDGPAAQDGKMET-GDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp ECTTSHHHHTSCCCT-TCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998532 3466677665 3789999999964
No 115
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.98 E-value=7.1e-10 Score=88.27 Aligned_cols=61 Identities=21% Similarity=0.435 Sum_probs=49.4
Q ss_pred CCCCChhhhcCCccC----------CeEEEEECCEecCCChHHHHHHHH-hCCCCeEEEEEEECCCceEEEEEEc
Q psy18011 1 VQDNSPGQKAGLEAF----------FDFIVAIDNIRLDQDNDTLKELLK-NGIDKELKMAVYSSKTQDVRTVNIT 64 (163)
Q Consensus 1 V~~~SpA~~AGL~~~----------GD~I~~Ing~~v~~~~d~~~~~l~-~~~~~~v~l~v~r~~~~~~~~v~~~ 64 (163)
|.++|||++|||++. ||+|++|||++|.+|.| +...+. ..+++++.++|+|++.. +++++.
T Consensus 258 V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~d-l~~~l~~~~~g~~v~l~v~R~g~~--~~~~v~ 329 (348)
T 3qo6_A 258 APPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD-LYRILDQCKVGDEVTVEVLRGDHK--EKISVT 329 (348)
T ss_dssp CCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHH-HHHHHTTCCTTCEEEEEEECSSSE--EEEEEE
T ss_pred ecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHH-HHHHHHhCCCcCEEEEEEEECCEE--EEEEEE
Confidence 578999999999962 89999999999999965 666664 46678999999998844 454444
No 116
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=7.6e-10 Score=73.33 Aligned_cols=51 Identities=14% Similarity=0.338 Sum_probs=41.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ +. ....++... +..+.|+|.|++
T Consensus 45 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~-~~~~~l~~~-g~~v~l~v~R~~ 98 (105)
T 1wha_A 45 IAEGGAAHRAGTLQV-GDRVLSINGVDVTEARHD-HAVSLLTAA-SPTIALLLEREA 98 (105)
T ss_dssp CCTTSSHHHHSSCCT-TCEEEEESSCBCTTCCHH-HHHHHHTSC-CSCEEEEEEECC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHcC-CCeEEEEEEECC
Confidence 57899999999 999 99999999999988 53 344555544 677999999964
No 117
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.97 E-value=1.6e-10 Score=77.60 Aligned_cols=52 Identities=15% Similarity=0.338 Sum_probs=41.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++... +..+.|+|.|++
T Consensus 42 V~~~s~A~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 95 (113)
T 2g5m_B 42 VTEGGAAHRDGRIQV-NDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGRER 95 (113)
T ss_dssp CCTTSHHHHHTCSCT-TCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEECC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 57899999999 999 9999999999998643 2233445443 688999999976
No 118
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.97 E-value=9.9e-10 Score=73.70 Aligned_cols=52 Identities=17% Similarity=0.332 Sum_probs=41.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++.. .+.++.|+|.|++
T Consensus 56 V~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 56 LAEDGPAERSGKMRI-GDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKRGE 109 (112)
T ss_dssp ECTTSHHHHTTCCCT-TCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCE
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998863 223344444 5678999999864
No 119
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.97 E-value=5.4e-09 Score=90.45 Aligned_cols=115 Identities=18% Similarity=0.189 Sum_probs=74.1
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECCCc--eEEEEEEccCCCCCCcceee
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSKTQ--DVRTVNITPSNSWGGQGLLG 76 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~~~--~~~~v~~~~~~~~~~~~~lG 76 (163)
|.+||||++|| |++ ||+|++|||+++.+|.. ....++.. .+..+.|+|.|.+.. ..+++++... ...||
T Consensus 96 v~~gspA~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~~~~~~~~v~l~k~-----~~~lG 168 (721)
T 2xkx_A 96 IIPGGAAAQDGRLRV-NDSILFVNEVDVREVTHSAAVEALKE-AGSIVRLYVMRRKPPAEKVMEIKLIKG-----PKGLG 168 (721)
T ss_pred eCCCCHHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHhhc-cccccceEEEecccccccceeeeeeee-----cCCCc
Confidence 46899999999 999 99999999999999852 22344433 467899999987532 2344554422 11244
Q ss_pred eEEee-----------------ecccc----cc--cceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 77 VSIRF-----------------CSFEG----AN--ENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 77 l~~~~-----------------~~~~~----~~--~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
+.+.. ....+ ++ ..|-.|++||+ .++.++++. .++.+.|.|.|++.
T Consensus 169 ~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 169 FSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAKPSN 245 (721)
T ss_pred eeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 44321 00001 11 11235999998 456777765 57899999998543
No 120
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.96 E-value=1.1e-09 Score=69.62 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++|||++ ||+|++|||+.+.... +....++. ..+.++.|+|..
T Consensus 30 v~~gspA~~aGl~~-GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 30 IVKDSSAARNGLLT-EHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp ECTTSHHHHHTCCS-SEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred ecCCCHHHHcCCCC-CCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEEe
Confidence 46899999999999 9999999999997754 34556676 466788888864
No 121
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.96 E-value=8.4e-10 Score=72.63 Aligned_cols=52 Identities=13% Similarity=0.245 Sum_probs=41.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+.. +....++.. .+..+.|+|.|++
T Consensus 41 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 41 IIPGGAAAMDGRLGV-NDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRRQ 94 (102)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998732 224445544 5688999999965
No 122
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.96 E-value=7.8e-10 Score=71.65 Aligned_cols=51 Identities=8% Similarity=0.298 Sum_probs=42.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec--CCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL--DQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++ .+|.+ +..++....+ .+.|+|.+..
T Consensus 35 v~~gspA~~aG~L~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~-~v~l~v~~~~ 88 (93)
T 3o46_A 35 IMRGGAADRSGLIHV-GDELREVNGIPVEDKRPEE-IIQILAQSQG-AITFKIIPGS 88 (93)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEESTTSCHHH-HHHHHHHCCE-EEEEEEECC-
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCC-eEEEEEEeCC
Confidence 46899999999 999 999999999999 67754 6677776554 8899988753
No 123
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=7.7e-10 Score=74.40 Aligned_cols=52 Identities=19% Similarity=0.339 Sum_probs=44.0
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEecCCC-hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRLDQD-NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v~~~-~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++ |||++ ||+|++|||+++.++ .+.+..++.. .+..+.|+|.|.+
T Consensus 50 V~~~spA~~~agL~~-GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 103 (114)
T 1uew_A 50 IIDGSPADRCAKLKV-GDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQE 103 (114)
T ss_dssp ECTTCTTGGGSSCCT-TCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCCS
T ss_pred ECCCChHHHhCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 468999999 99999 999999999999985 2346677766 6789999999865
No 124
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=5.8e-10 Score=72.16 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=41.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec-CCChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL-DQDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v-~~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++ .+|.+ +..++... ++++.|+|.|.
T Consensus 36 V~~~spA~~ag~L~~-GD~I~~ing~~v~~~~~~-~~~~l~~~-~~~v~l~v~~~ 87 (91)
T 2e7k_A 36 ILHGGMVAQQGLLHV-GDIIKEVNGQPVGSDPRA-LQELLRNA-SGSVILKILSG 87 (91)
T ss_dssp ECSSSHHHHHCCCCT-TCEEEEETTEECTTCHHH-HHHHHHTC-CSSBCEEEECC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCHHH-HHHHHHcC-CCeEEEEEEEC
Confidence 46899999987 999 999999999999 88854 66777664 56788888874
No 125
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.95 E-value=1.4e-09 Score=72.07 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=41.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+.. +....++.. .++.+.|+|.|++
T Consensus 45 V~~~spA~~aG~L~~-GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 98 (106)
T 3axa_A 45 VVKGGAADVDGRLAA-GDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQG 98 (106)
T ss_dssp EBTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998632 223344444 5788999999976
No 126
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.94 E-value=6.6e-10 Score=75.59 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=41.9
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++| ||++ ||+|++|||+++.++. +....++... +.++.|+|.|++.
T Consensus 60 V~~~spA~~aggL~~-GD~Il~VnG~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 60 MHPTGVAAQTQKLRV-GDRIVTICGTSTEGMTHTQAVNLLKNA-SGSIEMQVVAGGD 114 (120)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEECTTCBHHHHHHHHHHC-CSEEEEEEECCTT
T ss_pred ECCCCHHHHhCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 4689999999 9999 9999999999998863 2234455554 4569999999763
No 127
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=1.3e-09 Score=72.47 Aligned_cols=51 Identities=16% Similarity=0.320 Sum_probs=42.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ ...++.. .+..+.|+|.|++
T Consensus 49 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~-~~~~~~~-~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 49 VIPQGAAESDGRIHK-GDRVLAVNGVSLEGATHKQ-AVETLRN-TGQVVHLLLEKGQ 102 (108)
T ss_dssp ECTTSTHHHHTCCCS-SCEEEEETTEECBSCTTSH-HHHHHHH-TTSEEEEEEECCC
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998 6644 4455555 3688999999975
No 128
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=70.72 Aligned_cols=52 Identities=17% Similarity=0.294 Sum_probs=41.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.. .+.++.|+|.|++
T Consensus 40 v~~~s~A~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~g 93 (97)
T 2iwn_A 40 ITKSSAVEHDGRIQI-GDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRRG 93 (97)
T ss_dssp ECTTCHHHHHCCCCT-TCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEEE
T ss_pred eCCCChHHhCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999873 223344444 6788999998864
No 129
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.94 E-value=1.5e-09 Score=70.80 Aligned_cols=48 Identities=33% Similarity=0.414 Sum_probs=37.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++|||++ ||+|++|||+++.+++ +++..++. +.++.++|..
T Consensus 42 V~~~spA~~aGL~~-GD~Il~vng~~v~~~~~~~l~~~l~---~~~l~ltV~~ 90 (94)
T 3kzd_A 42 VKETGLASKKGLKA-GDEILEINNRAADALNSSMLKDFLS---QPSLGLLVRT 90 (94)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEEGGGCCHHHHHHHHH---SSEEEEEEEE
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHh---CCeEEEEEEe
Confidence 46899999999999 9999999999999642 34555554 3567777754
No 130
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.94 E-value=1.5e-09 Score=74.57 Aligned_cols=53 Identities=11% Similarity=0.216 Sum_probs=43.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCC-CCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGI-DKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~-~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +.+..++.... ++.+.|+|.|+.
T Consensus 50 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 50 LVLDGPAALDGKMET-GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp ECTTSHHHHHSSCCT-TCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998642 34667776654 788999999964
No 131
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.94 E-value=1.8e-09 Score=74.56 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=43.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCC-hHHHHHHHHhC-CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQD-NDTLKELLKNG-IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~-~d~~~~~l~~~-~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+. .+.+..++... .+..+.|+|.|++
T Consensus 72 V~~gspA~~aG~L~~-GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 72 VKKGSLADTVGHLRP-GDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp ECTTSHHHHTSCCCT-TCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 46899999999 999 999999999999763 13466677654 6789999999865
No 132
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.93 E-value=9e-10 Score=72.53 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=42.6
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEec--CCChHHHHHHHHhC-CCCeEEEEEEEC
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRL--DQDNDTLKELLKNG-IDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~-~~~~v~l~v~r~ 53 (163)
|.++|||++ +||++ ||+|++|||+++ .+|.+ +..++... .+..+.|+|.|.
T Consensus 44 V~~~spA~~~ggl~~-GD~I~~Ing~~v~~~~~~~-~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 44 LLHGGPAERSGALSI-GDRLTAINGTSLVGLPLAA-CQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp ECTTSTTGGGSSCCT-TCEEEEESSCBCTTSCHHH-HHHHHHHTTTSSEEEEEECCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCCeEEEEEEeC
Confidence 468999999 67999 999999999999 78854 66777664 678899999874
No 133
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=1.1e-09 Score=73.52 Aligned_cols=52 Identities=19% Similarity=0.339 Sum_probs=41.9
Q ss_pred CCCCChhhhcCC-ccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGL-EAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL-~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++||| ++ ||+|++|||+++.++. +.+..++.... ..+.|+|.|.+
T Consensus 55 V~~~spA~~aGll~~-GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 108 (113)
T 1va8_A 55 IVKGGAAEKSGLLHE-GDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSS 108 (113)
T ss_dssp ECTTSHHHHHTCCCT-TCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 468999999999 99 9999999999999432 34666676544 57899999866
No 134
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.93 E-value=6.6e-10 Score=76.28 Aligned_cols=52 Identities=25% Similarity=0.427 Sum_probs=44.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|| |++ ||+|++|||+++.+ +. .+..++.. .+..+.|+|.|++.
T Consensus 53 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~-~~~~~l~~-~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 53 VIPGSAAYHNGHIQV-NDKIVAVDGVNIQGFANH-DVVEVLRN-AGQVVHLTLVRRKT 107 (129)
T ss_dssp ECTTSHHHHHTCCCS-SCBEEEETTBCCTTCCHH-HHHHHHHH-CCSSEEEEEEEESS
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHc-CCCeEEEEEEeCCc
Confidence 46899999999 999 99999999999998 64 46677766 77889999999763
No 135
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.93 E-value=5e-10 Score=75.86 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=43.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ |. ....++...++..+.+++.|++
T Consensus 49 V~~~spA~~aG~L~~-GD~Il~ing~~v~~~~~~-~~~~~l~~~~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 49 VFPNGLASQEGTIQK-GNEVLSINGKSLKGTTHH-DALAILRQAREPRQAVIVTRKL 103 (119)
T ss_dssp ECSSSHHHHHTSSCT-TCBCCEETTEECSSCCHH-HHHHHHHHTTSSSEEEEEEECC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHhCCCCeEEEEEEcCC
Confidence 46899999999 999 99999999999984 53 3556676667777788898876
No 136
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=7.8e-10 Score=73.96 Aligned_cols=52 Identities=19% Similarity=0.190 Sum_probs=44.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCC---CCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGI---DKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~---~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ |. ....++.... +.++.+++.|++
T Consensus 48 v~~~s~A~~aG~l~~-GD~Il~Vng~~~~~~~~~-~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 48 VIPGGDCYKDGRLKP-GDQLVSINKESMIGVSFE-EAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp ECTTSHHHHHCSCCT-TCBEEEETTSCCTTCCHH-HHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred eCCCChHHHCCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHccccCCCceEEEEEEeCC
Confidence 46899999999 999 99999999999987 64 4667777666 788999999865
No 137
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.92 E-value=9.1e-10 Score=73.39 Aligned_cols=51 Identities=20% Similarity=0.248 Sum_probs=42.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++.+ |. ....++...++..+.|+|.|.
T Consensus 51 v~~~spA~~aG~L~~-GD~Il~Vng~~v~~~~~~-~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 51 LVADGVAERSGGLLP-GDRLVSVNEYCLDNTSLA-EAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp ECTTCHHHHHTCCCT-TCEEEEESSCBCTTCCHH-HHHHHHHHSCSEEEEEEEECC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHhCCCCeEEEEEEcC
Confidence 46899999999 999 99999999999976 53 466777776666899999884
No 138
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.1e-09 Score=74.12 Aligned_cols=51 Identities=20% Similarity=0.338 Sum_probs=43.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec--CCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL--DQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++ .++.+ +..++.. .+..+.|+|.|++
T Consensus 49 V~~~spA~~aG~l~~-GD~Il~Ing~~v~~~~~~~-~~~~l~~-~g~~v~l~v~r~~ 102 (117)
T 1v62_A 49 IKPASVVDRSGALHP-GDHILSIDGTSMEHCSLLE-ATKLLAS-ISEKVRLEILPVP 102 (117)
T ss_dssp CCTTSHHHHHTCCCT-TCBEEEETTEETTSCCHHH-HHHHHHS-CSSEEEEEECCBT
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHh-CCCeEEEEEEECC
Confidence 57899999999 999 999999999999 56744 6667764 6789999999865
No 139
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=5.1e-10 Score=76.67 Aligned_cols=51 Identities=24% Similarity=0.385 Sum_probs=43.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++. ++.+ +..++... +..+.|+|.|.+
T Consensus 68 V~~~spA~~aGL~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~-g~~v~l~v~r~~ 120 (126)
T 2yuy_A 68 VKEGGPAFEAGLCT-GDRIIKVNGESVIGKTYSQ-VIALIQNS-DTTLELSVMPKD 120 (126)
T ss_dssp CCSSSHHHHHTCCS-SCCCCEETTEECSSCCHHH-HHHHHHTC-TTEEEEECCCCC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCEEEEEEEECC
Confidence 56899999999999 9999999999998 7744 66667654 788999998865
No 140
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.92 E-value=4.5e-10 Score=76.95 Aligned_cols=52 Identities=25% Similarity=0.427 Sum_probs=44.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+ +.+ +..++....+..+.+++.|++
T Consensus 40 V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~-~~~~l~~~~~~~~~l~v~R~g 93 (128)
T 2kjd_A 40 VDPDSPAEASGLRA-QDRIVEVNGVCMEGKQHGD-VVSAIRAGGDETKLLVVDRET 93 (128)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECTTCCHHH-HHHHHHTTCSEEEEEEECHHH
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCCCCEEEEEEEeCC
Confidence 46899999999999 99999999999999 754 667777666778889999876
No 141
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=1.3e-09 Score=72.26 Aligned_cols=52 Identities=12% Similarity=0.269 Sum_probs=40.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +....++.. .+..+.+++.|.+
T Consensus 39 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 91 (106)
T 2eei_A 39 ITPQGVAMRAGVLA-DDHLIEVNGENVEDASHEEVVEKVKK-SGSRVMFLLVDKE 91 (106)
T ss_dssp CCTTSHHHHHTCCS-SEEEEEETTEECTTCCHHHHHHHHHH-HCSEEEEEECCTT
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEcCc
Confidence 57899999999999 9999999999998763 223344443 3568899998865
No 142
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.3e-09 Score=73.80 Aligned_cols=51 Identities=24% Similarity=0.369 Sum_probs=41.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ ...++... +..+.|+|.|++
T Consensus 61 V~~gspA~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~~-g~~v~l~v~R~~ 114 (117)
T 2byg_A 61 IIDGGAAQKDGRLQV-GDRLLMVNNYSLEEVTHEE-AVAILKNT-SEVVYLKVGKPT 114 (117)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHTC-CSEEEEEEEEEE
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCeEEEEEEeCC
Confidence 46899999999 999 9999999999999 5533 45555543 688999999854
No 143
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.91 E-value=3.3e-09 Score=86.83 Aligned_cols=61 Identities=16% Similarity=0.304 Sum_probs=51.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||+++.+|.| +..++...+ +.+.|+|+|++ +.+.+.+.+.
T Consensus 370 V~~~spA~~aGL~~-GD~I~~vng~~v~~~~~-~~~~l~~~~-~~v~l~v~R~g--~~~~~~~~~~ 430 (436)
T 4a8c_A 370 VVKGSPAAQAGLQK-DDVIIGVNRDRVNSIAE-MRKVLAAKP-AIIALQIVRGN--ESIYLLMRLE 430 (436)
T ss_pred eCCCCHHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHhCC-CeEEEEEEECC--EEEEEEEEec
Confidence 46899999999999 99999999999999955 777777644 48999999987 6677776665
No 144
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.91 E-value=1.7e-09 Score=71.80 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=40.7
Q ss_pred CCCCChhhhcC--CccCCeEEEEECCEecCCChH-HHHHHHHhCC---CCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG--LEAFFDFIVAIDNIRLDQDND-TLKELLKNGI---DKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG--L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~---~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++.+|.. ....++.... +..+.|+|.|+
T Consensus 50 V~~~spA~~aG~rL~~-GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 50 VAPGTPADLCVPRLNE-GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp ECTTSHHHHSSSCCCT-TCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred ECCCCchHHcCCccCC-CCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 46899999999 999 99999999999998743 2344554433 35889998873
No 145
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.91 E-value=1.3e-09 Score=73.50 Aligned_cols=50 Identities=18% Similarity=0.278 Sum_probs=40.9
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec--CCChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL--DQDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++ .+|.+ +..++.... ..+.++|.+.
T Consensus 57 V~~gspA~~aG~L~~-GD~I~~Ing~~v~~~~~~~-~~~~l~~~~-~~v~l~v~~~ 109 (114)
T 2gzv_A 57 VFDNTPAALDGTVAA-GDEITGVNGRSIKGKTKVE-VAKMIQEVK-GEVTIHYNKL 109 (114)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHHCC-SEEEEEEECC
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcCC-CeEEEEEEec
Confidence 46899999999 999 999999999999 78855 667776554 4588888763
No 146
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=72.53 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=42.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +.+..++.. .++.+.|+|.|++
T Consensus 45 V~~~spA~~aG~l~~-GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 98 (111)
T 2dlu_A 45 IVPGGLADRDGRLQT-GDHILKIGGTNVQGMTSEQVAQVLRN-CGNSVRMLVARDP 98 (111)
T ss_dssp ECTTSSHHHHTCCCS-SCEEEEESSCCCTTSCHHHHHHHHHH-HCSEEEEEEEESC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999652 334455554 3578999999965
No 147
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=1.8e-09 Score=69.73 Aligned_cols=52 Identities=21% Similarity=0.360 Sum_probs=40.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++.... .++.|+|.|+.
T Consensus 37 V~~~spA~~aGgl~~-GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 90 (93)
T 2dkr_A 37 VIPGGVADRHGGLKR-GDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSGP 90 (93)
T ss_dssp ECTTSHHHHHCCCCT-TCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeCC
Confidence 46899999996 999 9999999999999752 33445555543 57899998754
No 148
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.3e-09 Score=72.48 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=42.0
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++.. .++.+.|+|.|++
T Consensus 56 v~~~s~A~~aG~L~~-GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 56 ILPGGSAEQTGKLME-GMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLDL 109 (117)
T ss_dssp ECTTCHHHHHSSCCT-TCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESSC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEECC
Confidence 46899999999 999 9999999999998742 334455554 5678999999865
No 149
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=1.4e-09 Score=72.26 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=41.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++.. .+.++.|+|.|++
T Consensus 47 V~~~spA~~aG~L~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 47 VTEGGAAQRDGRIQV-NDQIVEVDGISLVGVTQNFAATVLRN-TKGNVRFVIGREK 100 (107)
T ss_dssp ECTTCHHHHHCSSCT-TCBEEEETTEECBSCCHHHHHHHHHH-CCSEEEEEEEEEC
T ss_pred eCCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999998642 223344544 3688999999864
No 150
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=73.66 Aligned_cols=51 Identities=27% Similarity=0.347 Sum_probs=42.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC---CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD---QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~---~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ ...++.. .+..+.|+|.|+.
T Consensus 61 V~~~spA~~aG~L~~-GD~Il~ing~~v~~~~~~~~-~~~~l~~-~~~~v~l~v~r~~ 115 (128)
T 2db5_A 61 VQPGSVADRDQRLKE-NDQILAINHTPLDQNISHQQ-AIALLQQ-TTGSLRLIVAREP 115 (128)
T ss_dssp CCTTSHHHHTCCCCS-SCBEEEESSCBCSTTSCHHH-HHHHHHH-CCSEEEEEEEECC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCCHHH-HHHHHHc-CCCeEEEEEEcCC
Confidence 57899999999 999 9999999999998 6644 5566665 5688999999964
No 151
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.89 E-value=1.9e-09 Score=73.62 Aligned_cols=50 Identities=18% Similarity=0.267 Sum_probs=40.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.+||||++|| |++ ||+|++|||+++. +|. ....++...++ .+.++|.|.
T Consensus 52 v~~gspA~~aG~L~~-GD~Il~ing~~v~~~~~~-~~~~~l~~~~~-~v~l~v~r~ 104 (125)
T 3hpk_A 52 VFDNTPAALDGTVAA-GDEITGVNGRSIKGKTKV-EVAKMIQEVKG-EVTIHYNKL 104 (125)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHH-HHHHHHHHSCS-EEEEEEEEE
T ss_pred eCCCCHHHHCCCCCC-CCEEEEECCEECCCCCHH-HHHHHHHcCCC-eEEEEEEEC
Confidence 46899999999 999 9999999999998 453 45566766544 599999883
No 152
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.4e-09 Score=73.44 Aligned_cols=50 Identities=32% Similarity=0.381 Sum_probs=40.5
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|. +.+..++. +..+.|+|.|..
T Consensus 51 V~~~spA~~aGL~~-GD~Il~Ing~~v~~~~~~~~~~~l~---~~~v~l~v~R~p 101 (114)
T 2d8i_A 51 VKETGLASKKGLKA-GDEILEINNRAADALNSSMLKDFLS---QPSLGLLVRTYP 101 (114)
T ss_dssp CCTTSSHHHHTCCT-TCCEEEESSCBGGGCCHHHHHHHHT---SSEEEEEEEECC
T ss_pred eCCCCHHHHcCCCC-CCEEEEECCEECCCcCHHHHHHHHh---CCcEEEEEEECC
Confidence 57899999999999 9999999999999862 33555554 348899998853
No 153
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.89 E-value=2.3e-09 Score=72.77 Aligned_cols=50 Identities=16% Similarity=0.320 Sum_probs=41.2
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ ...++... +.++.|+|.|.
T Consensus 60 V~~gspA~~aG~L~~-GD~Il~VNg~~v~~~~~~~-~~~~l~~~-~~~v~L~v~R~ 112 (118)
T 3b76_A 60 VEPGGVISRDGRIKT-GDILLNVDGVELTEVSRSE-AVALLKRT-SSSIVLKALEV 112 (118)
T ss_dssp ECTTSHHHHHCSSCT-TCEEEEETTEEGGGSCHHH-HHHHHHSC-CSEEEEEEEEE
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCeEEEEEEEC
Confidence 46899999999 999 9999999999999 6644 55666654 57799999884
No 154
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.88 E-value=3.8e-09 Score=67.39 Aligned_cols=50 Identities=20% Similarity=0.393 Sum_probs=37.8
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||++ |||++ ||+|++|||+++.++. +....++.. .+.++.|+|.+
T Consensus 35 V~~gspA~~~agl~~-GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~~ 86 (87)
T 4e34_A 35 IHPGQPADRCGGLHV-GDAILAVNGVNLRDTKHKEAVTILSQ-QRGEIEFEVVY 86 (87)
T ss_dssp ECTTSHHHHHSCCCT-TEEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred ECCCCHHHhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 468999999 79999 9999999999997652 224455554 44578887764
No 155
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.88 E-value=2.8e-09 Score=73.17 Aligned_cols=51 Identities=14% Similarity=0.317 Sum_probs=41.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec--CCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL--DQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++ .++.+ +..++... +..+.|+|.|++
T Consensus 72 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~-~~~~l~~~-~~~v~l~v~r~~ 125 (128)
T 1nf3_C 72 LVPGGLAQSTGLLAV-NDEVLEVNGIEVSGKSLDQ-VTDMMIAN-SRNLIITVRPAN 125 (128)
T ss_dssp ECTTCHHHHHTCCCT-TCEEEEETTEESTTCCHHH-HHHHHHHT-TTSEEEEEECCC
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcC-CCeEEEEEEECC
Confidence 46899999999 999 999999999999 56643 55666654 356999999865
No 156
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.88 E-value=2.2e-09 Score=68.94 Aligned_cols=50 Identities=20% Similarity=0.288 Sum_probs=40.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEec--CCChHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRL--DQDNDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v--~~~~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++|| |++ ||+|++|||+++ .+|++ ...++.... .++.|++.+.
T Consensus 28 V~~gspA~~aG~L~~-GD~Il~ing~~v~~~~~~~-~~~~i~~~~-~~v~L~v~~~ 80 (88)
T 3e17_A 28 MTRTGLATKDGNLHE-GDIILKINGTVTENMSLTD-ARKLIEKSR-GKLQLVVLRD 80 (88)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHHTT-TEEEEEECCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHcCC-CeEEEEEeCC
Confidence 46899999999 999 999999999999 66744 567776654 4788887653
No 157
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=4e-09 Score=70.53 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=41.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+|.. ....++. ..++.+.|+|.|++
T Consensus 46 V~~~s~A~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 46 ILAGGPADLSGELRR-GDRILSVNGVNLRNATHEQAAAALK-RAGQSVTIVAQYRP 99 (113)
T ss_dssp BCSSSHHHHTTCCCT-TCEEEEESSCBCTTCCHHHHHHHHH-SCCSEEEEEEECCH
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHH-hCCCcEEEEEEECc
Confidence 46899999999 999 99999999999999842 2333444 35678999998854
No 158
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.86 E-value=3.2e-09 Score=77.72 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=42.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.+||||++|||++ ||+|++|||+++.+ |.+ ...++.. ++.+.|+|.|++
T Consensus 117 V~~gspA~~aGL~~-GD~Il~vng~~v~~~~~~~-~~~~l~~--~~~v~l~v~r~g 168 (192)
T 3k1r_A 117 LIKGGQADSVGLQV-GDEIVRINGYSISSCTHEE-VINLIRT--EKTVSIKVRHIG 168 (192)
T ss_dssp ECTTSHHHHTTCCT-TEEEEEETTEECTTCCHHH-HHHHHTS--SSEEEEEEEECC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHcC--CCeEEEEEEECC
Confidence 46899999999999 99999999999998 744 5556655 789999999976
No 159
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.86 E-value=2.1e-09 Score=73.33 Aligned_cols=52 Identities=15% Similarity=0.301 Sum_probs=40.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++.. ....++... +..+.|+|.|++
T Consensus 58 V~~~spA~~aG~L~~-GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 111 (124)
T 2daz_A 58 INPEGPAAADGRMRI-GDELLEINNQILYGRSHQNASAIIKTA-PSKVKLVFIRNE 111 (124)
T ss_dssp ECTTSHHHHHTCCCT-TCEECEESSCBCTTSCHHHHHHHHHHS-CSEEEEEEEECT
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 46899999999 999 99999999999977432 233445444 458999999975
No 160
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.86 E-value=6.4e-09 Score=83.88 Aligned_cols=64 Identities=23% Similarity=0.384 Sum_probs=50.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCCc-eEEEEEEcc
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKTQ-DVRTVNITP 65 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~~-~~~~v~~~~ 65 (163)
|.++|||++|||++ ||+|++|||+++.+|. +.+..++....+.++.|+|.|++.. +.+++++.+
T Consensus 106 v~~~spA~~aGl~~-GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r 171 (388)
T 1fc6_A 106 PAPGGPAEKAGARA-GDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTR 171 (388)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEEC
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEE
Confidence 46899999999999 9999999999999983 3455677666778999999997731 145566543
No 161
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.86 E-value=4.9e-09 Score=68.01 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=39.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++ ||++ ||+|++|||+++.++.. ....++. ..++++.|+|.|+.
T Consensus 42 V~~~spA~~-gL~~-GD~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 42 VQPEGPASK-LLQP-GDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVREV 93 (95)
T ss_dssp ECTTSTTTT-TCCT-TCEEEEETTEECTTCBHHHHHHHHH-HCCSEEEEEEEEEC
T ss_pred ECCCCchhh-CCCC-CCEEEEECCEEcCCCCHHHHHHHhh-cCCCeEEEEEEeCC
Confidence 468999999 9999 99999999999988532 2333344 34688999998853
No 162
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.85 E-value=3.2e-09 Score=77.18 Aligned_cols=52 Identities=23% Similarity=0.347 Sum_probs=43.3
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|| |++ ||+|++|||+++.+ |.+ ...++.. .++.+.|+|.|++.
T Consensus 137 V~~gs~A~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~-~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 137 IIEGGAAHKDGRLQI-GDKILAVNSVGLEDVMHED-AVAALKN-TYDVVYLKVAKPSN 191 (196)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECSSCBHHH-HHHHHHS-CCEEEEEEEEEESC
T ss_pred ECCCChHHhcCCCCC-CCEEEEECCCcCCCCCHHH-HHHHHHc-CCCeEEEEEeCCCC
Confidence 46899999999 999 99999999999998 754 5566654 46789999999763
No 163
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=3.2e-09 Score=69.23 Aligned_cols=51 Identities=16% Similarity=0.246 Sum_probs=40.2
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||+ |||++ ||+|++|||+++.+.. +....++.. .++++.|+|.|++
T Consensus 38 V~~~spA~-agL~~-GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 38 VTAGGSAH-GKLFP-GDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp BCSSSSST-TTSCT-TCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred ECCCCchh-hCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 46899996 99999 9999999999998742 223344444 5788999999965
No 164
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.85 E-value=3e-10 Score=89.87 Aligned_cols=60 Identities=23% Similarity=0.478 Sum_probs=0.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++.. ++++.++|+|++ +..++++.|.
T Consensus 261 v~~~spA~~aGl~~-GD~I~~ing~~v~~~~~-~~~~l~~--~~~v~l~v~R~g--~~~~~~v~p~ 320 (332)
T 3num_A 261 VIPDTPAEAGGLKE-NDVIISINGQSVVSAND-VSDVIKR--ESTLNMVVRRGN--EDIMITVIPE 320 (332)
T ss_dssp ------------------------------------------------------------------
T ss_pred eccCCChHHcCCCC-CCEEEEECCEECCCHHH-HHHHHhC--CCeEEEEEEECC--EEEEEEEEEe
Confidence 46899999999999 99999999999999965 6566653 677999999987 5566666665
No 165
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=5.5e-09 Score=69.35 Aligned_cols=52 Identities=23% Similarity=0.410 Sum_probs=40.6
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++| ||++ ||+|++|||+++.+.. +....++.. .+..+.|+|.|.+
T Consensus 48 V~~~spA~~aggL~~-GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 48 IVDSGPAAKEGGLQI-HDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLRRT 101 (107)
T ss_dssp ECSSSHHHHTTCCCS-SCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEECC
T ss_pred eCCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEeCC
Confidence 4689999999 9999 9999999999997642 223344544 4578999998864
No 166
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=4.5e-09 Score=71.22 Aligned_cols=52 Identities=17% Similarity=0.270 Sum_probs=41.4
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.++. +....++... +..+.|+|.|++
T Consensus 54 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 107 (120)
T 2eno_A 54 IKENGAAALDGRLQE-GDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRL 107 (120)
T ss_dssp ECSSSHHHHSCCSCT-TCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEEEE
T ss_pred ECCCChHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 46899999999 999 9999999999999974 1233444433 678999999854
No 167
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=1.7e-09 Score=71.60 Aligned_cols=52 Identities=12% Similarity=0.256 Sum_probs=41.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCC--ChHHHHHHHHhC----CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQ--DNDTLKELLKNG----IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~----~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+ |.+ ...++... .++++.+.|.|.+
T Consensus 39 v~~~s~A~~aG~L~~-GD~Il~Vng~~v~~~~~~~-~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 39 IQRGGSAHNCGQLKV-GHVILEVNGLTLRGKEHRE-AARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp ECTTSHHHHHCSSCT-TCBCCEETTEECTTCBHHH-HHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred eCCCChHHHCCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHHhcccCCCCeEEEEEEEcc
Confidence 46899999999 999 99999999999976 754 55566543 5678889888854
No 168
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.83 E-value=2.8e-09 Score=73.41 Aligned_cols=53 Identities=8% Similarity=0.093 Sum_probs=44.2
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCC-hHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQD-NDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~-~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++| ||++ ||+|++|||+++.++ .+....++...++..+.++|.|.+
T Consensus 64 V~~gs~A~~aggL~~-GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 64 IFKGAASEQSETVQP-GDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp ECSSCCCSSSCCCCT-TCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 4689999999 9999 999999999999874 134667777777788999999854
No 169
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.82 E-value=6.5e-09 Score=68.47 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=39.4
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~ 53 (163)
|.++|||++ ||++ ||+|++|||+++.++.. ....++. ..+.++.|+|.|+
T Consensus 50 V~~~spA~~-gL~~-GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 50 VQPEGPASK-LLQP-GDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVRE 100 (103)
T ss_dssp BSSSSTTSS-SCCT-TCEEEEETTEECSSCCHHHHHHHHH-HCCSEEEEEEECC
T ss_pred ECCCCchHH-CCCC-CCEEEEECCEECCCCCHHHHHHHhh-cCCCeEEEEEEec
Confidence 468999999 9999 99999999999987532 2334444 3468899999885
No 170
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.82 E-value=1.1e-08 Score=86.78 Aligned_cols=61 Identities=23% Similarity=0.367 Sum_probs=50.3
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHh-CCCCeEEEEEEECCCceEEEEEEccC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPS 66 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~-~~~~~v~l~v~r~~~~~~~~v~~~~~ 66 (163)
|.+||||++|||++ ||+|++|||++| ++.+ +..++.. .+++++.++|.|++ +.+++++.+.
T Consensus 503 V~~~spA~~AGL~~-GD~I~aInG~~v-~~~~-l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~l~ 564 (597)
T 4fgm_A 503 VYHDESAYHAGLSA-GDKIIAIDHLQA-TEQS-VKRILERYIPGDTVTIHAFRRD--ELMTLELTWQ 564 (597)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEEC-CTTT-HHHHHTTCCTTCEEEEEEEETT--EEEEEEEECC
T ss_pred eCCCChHHHCCCCC-CCEEEEECCEEC-CHHH-HHHHHHhcCCCCEEEEEEEECC--EEEEEEEEec
Confidence 46899999999999 999999999999 5644 7777765 57789999999988 5566666554
No 171
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.82 E-value=6.3e-08 Score=83.76 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=42.4
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.++|||++|| |++ ||+|++|||+++.+|. +....++.. .++.+.|+|.|++.
T Consensus 191 V~~gs~A~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 191 IIEGGAAHKDGRLQI-GDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAKPSN 245 (721)
T ss_pred eCCCCchhhcCCCCC-CCEEEEECCeeCCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 46899999999 999 9999999999999984 224444543 35689999999763
No 172
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.82 E-value=2.9e-09 Score=73.03 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=42.7
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC------CCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG------IDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~------~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+.. +....++... .+..+.|+|.|.+
T Consensus 62 V~~gspA~~aG~L~~-GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 62 IIHGGAAFKDGRLRM-NDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp CCSSSSTHHHHTSCS-CCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred ECCCCHHHHCCCCCC-CCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 57899999999 999 9999999999998743 2355566543 4688999999965
No 173
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.81 E-value=2e-09 Score=71.13 Aligned_cols=47 Identities=23% Similarity=0.452 Sum_probs=38.3
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAV 50 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v 50 (163)
|.++|||++|||++ ||+|++|||+++. ++.+ +..++...++ ++.|+|
T Consensus 55 V~~~spA~~aGl~~-GD~I~~vng~~v~~~~~~~-~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 55 IQEDSPAHCAGLQA-GDVLANINGVSTEGFTYKQ-VVDLIRSSGN-LLTIET 103 (104)
T ss_dssp ECTTSHHHHHTCCT-TCBCCEETTEECTTCCHHH-HHHHHHHTTT-EEEEEC
T ss_pred ECCCChHHHcCCCC-CCEEEEECCEEcCCCCHHH-HHHHHHhCCC-cEEEEE
Confidence 46899999999999 9999999999999 6644 6677776654 777664
No 174
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.81 E-value=4.7e-09 Score=70.41 Aligned_cols=51 Identities=22% Similarity=0.368 Sum_probs=40.8
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHH-HHHHHHhCCCCeEEEEEEEC-C
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDT-LKELLKNGIDKELKMAVYSS-K 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~-~~~~l~~~~~~~v~l~v~r~-~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|.+. ...++... +.+.++|.|+ +
T Consensus 48 V~~~s~A~~aGL~~-GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~~g 100 (114)
T 1x5n_A 48 VKPGSLSAEVGLEI-GDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAAAG 100 (114)
T ss_dssp ECTTSTTTTTTCCT-TCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSSTT
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcCCC
Confidence 46899999999999 999999999999999531 33444433 5789999987 5
No 175
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.80 E-value=6.6e-09 Score=71.75 Aligned_cols=52 Identities=15% Similarity=0.280 Sum_probs=41.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.++. +....++.. .+..+.|+|.|..
T Consensus 72 V~~gspA~~aGL~~-GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 72 VDEGGVAWRAGLRM-GDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVMVT 124 (132)
T ss_dssp ECTTSGGGGGTCCT-TCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEECCC
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 46899999999999 9999999999999643 234455555 5678999998754
No 176
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.79 E-value=8.3e-09 Score=84.83 Aligned_cols=58 Identities=21% Similarity=0.322 Sum_probs=48.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNI 63 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~ 63 (163)
|.++|||++|||++ ||+|++|||++|.+|.| +..++.. .++.+.|+|+|++ +.+.+.+
T Consensus 393 V~~gspA~~aGL~~-GD~I~~Vng~~v~~~~~-~~~~l~~-~~~~v~l~v~R~g--~~~~v~l 450 (451)
T 3pv2_A 393 ASENSAGWRAGIRP-GDIIISANKKPVTDVKS-LQTIAQE-KKKELLVQVLRGP--GSMYLLV 450 (451)
T ss_dssp ECTTSHHHHHTCCT-TCEEEEETTEECCSHHH-HHHHTTS-SCSCEEEEEEETT--EEEEEEE
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHhc-CCCeEEEEEEECC--EEEEEEe
Confidence 46899999999999 99999999999999954 7677766 5678999999987 4455543
No 177
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=4e-09 Score=71.38 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=41.3
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCCCh-HHHHHHHHhC---CCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQDN-DTLKELLKNG---IDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~---~~~~v~l~v~r~ 53 (163)
|.++|||++| ||++ ||+|++|||+++.++. +....++... .++++.|+|.|.
T Consensus 50 V~~gspA~~aggL~~-GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 50 VYEGGAAERHGGVVK-GDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp CCTTSHHHHHCSSCT-TCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 5789999999 9999 9999999999999853 2344455432 368899999984
No 178
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=67.32 Aligned_cols=51 Identities=20% Similarity=0.386 Sum_probs=40.5
Q ss_pred CCCCChhhhc-CCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKA-GLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~A-GL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++| ||++ ||+|++|||+++.+ +.+ ...++...+ .++.|++.+..
T Consensus 42 V~~~s~A~~a~gL~~-GD~Il~Ing~~v~~~~~~~-~~~~l~~~~-~~v~l~v~~~~ 95 (103)
T 2dc2_A 42 IHPGQPADRCGGLHV-GDAILAVNGVNLRDTKHKE-AVTILSQQR-GEIEFEVVYVA 95 (103)
T ss_dssp ECTTSHHHHHTCCCS-SEEEEEETTEESTTSCHHH-HHHHHHHCC-SEEEEEEEECC
T ss_pred ECCCCHHHHhCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhCC-CcEEEEEEecC
Confidence 4689999995 9999 99999999999976 533 455665544 48999998854
No 179
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=4e-09 Score=71.32 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=41.2
Q ss_pred CCCCChhhhc--CCccCCeEEEEECCEecCCCh-HHHHHHHHhCC---CCeEEEEEEECC
Q psy18011 1 VQDNSPGQKA--GLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGI---DKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~A--GL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~---~~~v~l~v~r~~ 54 (163)
|.++|||++| ||++ ||+|++|||+++.++. +....++...+ ..++.|+|.|+.
T Consensus 48 V~~~spA~~a~gGL~~-GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 48 VAPGTPADLCVPRLNE-GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp ECSSSTTTSSSSCCCT-TCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred ECCCCHHHHhhcCCCC-CCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 4689999999 9999 9999999999998752 22445554433 258999999864
No 180
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.77 E-value=7e-09 Score=69.91 Aligned_cols=52 Identities=25% Similarity=0.342 Sum_probs=40.4
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++.+.. +....++.. .++.+.|+|.|..
T Consensus 57 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 57 VLEDSPAGKTNALKT-GDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSLS 110 (117)
T ss_dssp ECSSSTTTSSCSCCT-TCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCBS
T ss_pred eCCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 46899999999 999 9999999999998743 223344443 4678999998754
No 181
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.77 E-value=6.7e-09 Score=76.17 Aligned_cols=51 Identities=22% Similarity=0.390 Sum_probs=44.5
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. ++.+ +..++.. .++.+.|+|+|++
T Consensus 142 v~~~s~A~~aG~l~~-GD~I~~ing~~v~~~~~~~-~~~~l~~-~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 142 VRPGGPADREGTIKP-GDRLLSVDGIRLLGTTHAE-AMSILKQ-CGQEATLLIEYDV 195 (200)
T ss_dssp ECTTSHHHHHCCCCT-TCEEEEETTEECTTCCHHH-HHHHHHT-TCSEEEEEEEEEE
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHc-CCCeEEEEEEECC
Confidence 46899999999 999 9999999999999 8854 6677776 7789999999965
No 182
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.75 E-value=2.8e-08 Score=72.44 Aligned_cols=60 Identities=18% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEE---CCCceEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYS---SKTQDVRTVNI 63 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r---~~~~~~~~v~~ 63 (163)
|.++|||++ ||++ ||+|++|||+++.+... ....++... +..+.|+|.| ++.....++.+
T Consensus 31 v~~~spA~~-gl~~-GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~~~~G~~~~~~v~~ 94 (195)
T 2qbw_A 31 VQPEGPASK-LLQP-GDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELIIVREVGNGAKQEIRVRV 94 (195)
T ss_dssp ECTTSTTTT-TCCT-TCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEEEECSSSCEEEEEEEE
T ss_pred ECCCChHHh-CCCC-CCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEcCCCCCCceeEeEe
Confidence 468999999 9999 99999999999998642 233344444 3589999999 66443444444
No 183
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.72 E-value=1.6e-08 Score=74.32 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=41.6
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||++|.+|. +....++.. .++.+.|+|.|..
T Consensus 143 V~~gs~A~~aG~L~~-GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 143 LIQGQYPEIDSKLQR-GDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRPK 196 (206)
T ss_dssp ECTTSCHHHHHHCCT-TCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEEC
T ss_pred ECCCChHHHcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 46899999999 999 9999999999999873 224455544 4578999999853
No 184
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.7e-09 Score=72.33 Aligned_cols=51 Identities=16% Similarity=0.235 Sum_probs=40.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|| |++ ||+|++|||+++. +|.+ ...++.. .+..+.|+|.|+.
T Consensus 51 V~~~spA~~aG~L~~-GD~Il~vng~~v~~~~~~~-~~~~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 51 VSPTGAAGRDGRLRV-GLRLLEVNQQSLLGLTHGE-AVQLLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp ECTTSHHHHHSSCCT-TCBCCBBSSCBCTTSCHHH-HHHHHSS-CSSEEEECCCCCC
T ss_pred ECCCCHHHHcCCCCC-CCEEEEECCEECCCCCHHH-HHHHHHc-CCCeEEEEEEECC
Confidence 46899999999 999 9999999999999 4543 4455544 5678999998854
No 185
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=4.5e-08 Score=63.78 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=39.6
Q ss_pred hhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhCC-CCeEEEEEEECC
Q psy18011 6 PGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGI-DKELKMAVYSSK 54 (163)
Q Consensus 6 pA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~-~~~v~l~v~r~~ 54 (163)
+|++|||++ ||+|++|||+++.++. +.+..++...+ ++++.|+|.|++
T Consensus 42 ~a~~aGL~~-GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 42 IQGCPGLCE-GDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp GGGSTTCCS-SCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCS
T ss_pred ccccCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 478999999 9999999999998751 34667777654 789999999975
No 186
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.66 E-value=8.6e-09 Score=83.58 Aligned_cols=51 Identities=25% Similarity=0.431 Sum_probs=43.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKT 55 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~ 55 (163)
|.+||||++|||++ ||+|++|||++|.+| + +..++.. .+.++.|++.|++.
T Consensus 97 V~~gsPA~~AGL~~-GD~I~~InG~~v~~~-~-~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 97 VVPGSPAEEAGLQR-GHWIMMMNGDYITKK-V-ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp ECTTSHHHHTTCCT-TCEEEEETTBCBCTT-T-GGGGTSC-SCEEEEEEEEEEEC
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEEccch-h-HHHHhhC-CCCEEEEEEEeCCc
Confidence 46899999999999 999999999999999 4 4455555 77899999999754
No 187
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.65 E-value=2.9e-08 Score=80.17 Aligned_cols=52 Identities=25% Similarity=0.391 Sum_probs=44.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHh-CCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKN-GIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~-~~~~~v~l~v~r~~ 54 (163)
|.+||||++|||++ ||+|++|||+++.+ +.+ +..++.. ..++.+.|++.|++
T Consensus 38 V~~gspA~~aGL~~-GD~Il~VnG~~v~~~~~~e-~~~~l~~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 38 VLEDSPAAKEGLEE-GDQILRVNNVDFTNIIREE-AVLFLLDLPKGEEVTILAQKKK 92 (391)
T ss_dssp ECTTCHHHHTTCCT-TEEEEEETTEECTTCCHHH-HHHHHHHSCTTSEEEEEEEECH
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhhcCCCeEEEEEeeCC
Confidence 57899999999999 99999999999986 644 5566665 67889999999964
No 188
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.65 E-value=1.9e-08 Score=67.79 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=40.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChH-HHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDND-TLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d-~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||+ +||++ ||+|++|||+++.++.. ....++.. .++.+.|+|.|.+
T Consensus 53 V~~~spA~-~gL~~-GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 104 (117)
T 2csj_A 53 VLPGGPAD-GLLQE-NDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRPR 104 (117)
T ss_dssp ECTTSSHH-HHBCT-TCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEEE
T ss_pred ECCCCccc-ccCCC-CCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEECC
Confidence 46899997 99999 99999999999987632 23344444 4678999999854
No 189
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.58 E-value=9.5e-09 Score=76.71 Aligned_cols=51 Identities=27% Similarity=0.483 Sum_probs=43.1
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecC--CChHHHHHHHHhCCCCeE-EEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLD--QDNDTLKELLKNGIDKEL-KMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~--~~~d~~~~~l~~~~~~~v-~l~v~r~~ 54 (163)
|.+||||++|||++ ||+|++|||++|. +|.+ +..++... +..+ .++|.|++
T Consensus 40 V~~gSpA~~aGL~~-GD~Il~VNG~~V~~~s~~d-l~~~l~~~-g~~v~~l~V~R~g 93 (216)
T 2krg_A 40 VDPDSPAEASGLRA-QDRIVEVNGVCMEGKQHGD-VVSAIRAG-GDETKLLVVDRET 93 (216)
T ss_dssp ECTTSHHHHHTCCT-TCBCCEETTEECTTCCTHH-HHHHHHHH-CSEEEEEECCHHH
T ss_pred eCCCChHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhc-CCeEEEEEEEECC
Confidence 46899999999999 9999999999999 8865 55666654 6778 89988865
No 190
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.99 E-value=6.9e-09 Score=69.69 Aligned_cols=48 Identities=21% Similarity=0.432 Sum_probs=35.0
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEE
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVY 51 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~ 51 (163)
|.++|||++ |||++ ||+|++|||+++.+ +.+ ...++...+ ..+.|+|.
T Consensus 60 V~~~spA~~~aGL~~-GD~Il~ING~~v~~~~~~~-~~~~l~~~~-~~v~l~V~ 110 (112)
T 2lob_A 60 IHPGQPADRCGGLHV-GDAILAVNGVNLRDTKHKE-AVTILSQQR-GEIEFEVV 110 (112)
Confidence 468999999 99999 99999999999954 543 444554333 34666553
No 191
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.53 E-value=9.8e-08 Score=78.65 Aligned_cols=52 Identities=25% Similarity=0.391 Sum_probs=43.7
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHh-CCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKN-GIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~-~~~~~v~l~v~r~~ 54 (163)
|.+||||++|||++ ||+|++|||+++.+ +.+ +..++.. ..+..+.|+|.|++
T Consensus 30 V~~gspA~~aGL~~-GD~Il~VNG~~v~~~t~~e-~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 30 VLEDSPAAKEGLEE-GDQILRVNNVDFTNIIREE-AVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp ECSSSHHHHTTCCT-TEEEEEETTEECTTCCHHH-HHHHHHHSCTTSEEEEEEEECH
T ss_pred ECCCCHHHHcCCCC-CCEEEEECCEECCCCCHHH-HHHHHHhcCCCCEEEEEEEECC
Confidence 46899999999999 99999999999987 544 5566655 46789999999964
No 192
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.52 E-value=3.4e-07 Score=61.46 Aligned_cols=49 Identities=16% Similarity=0.165 Sum_probs=40.4
Q ss_pred hhhhcCCccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEECCC
Q psy18011 6 PGQKAGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSSKT 55 (163)
Q Consensus 6 pA~~AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~~~ 55 (163)
||+.|||++ ||+|++|||+++.+.. +++..++... .+.++.|+|.|++.
T Consensus 44 ~~~~aGL~~-GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 44 SQWCQGLQK-GDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp GGGSTTCCT-TCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred hHHhCCCCC-CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 688999999 9999999999999653 3466777754 47899999999773
No 193
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.47 E-value=1.7e-08 Score=82.89 Aligned_cols=51 Identities=18% Similarity=0.350 Sum_probs=0.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++|||++ ||+|++|||+++.+|.+ +..++....+ .+.|+|.|++
T Consensus 390 V~~gspA~~aGL~~-GDiI~~vng~~v~~~~~-l~~~l~~~~~-~v~l~v~R~g 440 (448)
T 1ky9_A 390 VKTGTPAAQIGLKK-GDVIIGANQQAVKNIAE-LRKVLDSKPS-VLALNIQRGD 440 (448)
T ss_dssp ------------------------------------------------------
T ss_pred ecCCCHHHHcCCCC-CCEEEEECCEECCCHHH-HHHHHHcCCC-eEEEEEEECC
Confidence 46899999999999 99999999999999965 6677765544 8899999976
No 194
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.41 E-value=1.9e-07 Score=71.56 Aligned_cols=52 Identities=21% Similarity=0.226 Sum_probs=42.0
Q ss_pred CCCCChhhh-cCCccCCeEEEEECCEecCCCh-HHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQK-AGLEAFFDFIVAIDNIRLDQDN-DTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~-AGL~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.+||||++ |||++ ||+|++|||+++.++. +....++... ++.+.|+|.|.+
T Consensus 110 V~~gspA~~~aGL~~-GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~~V~L~V~R~~ 163 (263)
T 1z87_A 110 IFKGLAADQTEALFV-GDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKYMK 163 (263)
T ss_dssp CCTTSHHHHCTTCCS-SCEEEEESSCBCTTSCHHHHHHHHHHC-CSCCCEEEECCS
T ss_pred ECCCCHHHHhCCCCC-CCEEEEECCEECCCcCHHHHHHHHhcC-CCeEEEEEEeCc
Confidence 578999999 79999 9999999999999863 2344556554 567999999864
No 195
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.21 E-value=3e-06 Score=75.43 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=48.5
Q ss_pred CCChhhhcC--CccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECCCceEEEEEEcc
Q psy18011 3 DNSPGQKAG--LEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 65 (163)
Q Consensus 3 ~~SpA~~AG--L~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~~~~~~~v~~~~ 65 (163)
++|||++|| |+ ||+|++|||+++.++.+ +..++....+.++.|+|.|++ .+.+++++.+
T Consensus 765 ~~spa~~ag~~l~--GD~I~~i~g~~~~~~~~-~~~~~~~~~g~~v~l~v~r~~-~~~~~~~~~~ 825 (1045)
T 1k32_A 765 EKSPIFEYGIDPT--GYLIEDIDGETVGAGSN-IYRVLSEKAGTSARIRLSGKG-GDKRDLMIDI 825 (1045)
T ss_dssp CBCGGGGGTCCCT--TCEEEEETTEECBTTBC-HHHHHHTTTTSEEEEEEECSS-SCEEEEEEEC
T ss_pred CCChHHHCCCCcC--CCEEEEECCEEccchhh-HHHhhcCCCCCEEEEEEECCC-CceEEEEEEE
Confidence 359999999 88 99999999999999965 667787778899999999975 2445666654
No 196
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.18 E-value=5.6e-06 Score=53.73 Aligned_cols=52 Identities=13% Similarity=0.083 Sum_probs=40.8
Q ss_pred CCCCChhhhcC-CccCCeEEEEECCEecCCCh-HHHHHHHHhC-CCCeEEEEEEEC
Q psy18011 1 VQDNSPGQKAG-LEAFFDFIVAIDNIRLDQDN-DTLKELLKNG-IDKELKMAVYSS 53 (163)
Q Consensus 1 V~~~SpA~~AG-L~~~GD~I~~Ing~~v~~~~-d~~~~~l~~~-~~~~v~l~v~r~ 53 (163)
+.++|||++.| |+. ||.|++|||+.+..|. +...+++... .+.++.|.+.+.
T Consensus 35 I~~gg~a~r~g~L~v-GD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 35 IKDGGVIDSVKTICV-GDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp ECTTSHHHHCTTCCT-TCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EcCCChHHhcCCCCC-CCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 36899999998 899 9999999999999885 3455667654 456788887664
No 197
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.81 E-value=2.7e-06 Score=68.54 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=0.0
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCC--ChHHHHHHHHhCCCCeEEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQ--DNDTLKELLKNGIDKELKMAVYS 52 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~--~~d~~~~~l~~~~~~~v~l~v~r 52 (163)
|.++|||+++||++ ||+|++|||+++.+ +. .+..++.. .++.+.+++.+
T Consensus 322 V~~gs~A~~aGL~~-GD~Il~VNg~~v~~~s~~-~~~~~l~~-~~~~v~L~V~p 372 (388)
T 3suz_A 322 LMRGGIAERGGVRV-GHRIIEINGQSVVATAHE-KIVQALSN-SVGEIHMKTMP 372 (388)
T ss_dssp ------------------------------------------------------
T ss_pred eecCCHHHHcCCCC-CCEEEEECCEECCCCCHH-HHHHHHHh-CCCeEEEEEEe
Confidence 46899999999999 99999999999974 43 34455544 34556676654
No 198
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.70 E-value=4.8e-05 Score=48.77 Aligned_cols=58 Identities=14% Similarity=0.277 Sum_probs=45.2
Q ss_pred ccceEEEeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEecCCC--CCCcceeceeeccc
Q psy18011 88 NENVWHILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSNS--WGGQGLLGVSIRFC 150 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~p~~~--~~~~g~iG~~~~~~ 150 (163)
+|. |++||+ .+|.++++.. +|+++.|+|.| +++.++++++|... +.+.+.||+++.-.
T Consensus 21 GD~---I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~~~~~~~~~gr~~~~~~~~~~ 87 (91)
T 2kjp_A 21 GDK---IISADGKNYQSAEKLIDYISSKKAGDKVTLKIER--EEKEKRVTLTLKQFPDEPDRAGIGVSLEHH 87 (91)
T ss_dssp SCE---EEEETTBCCSSHHHHHHHHSSCCSSCEECEEEES--SSCEECCCEECCCCTTCTTSCSCCSCCCTT
T ss_pred CCE---EEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEE--CCEEEEEEEEEeccCCCCCcceeEEeeecc
Confidence 566 999998 7888888876 69999999998 66778888888652 34567889887543
No 199
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.50 E-value=0.00017 Score=52.28 Aligned_cols=54 Identities=22% Similarity=0.283 Sum_probs=34.6
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEEECC
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVYSSK 54 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~r~~ 54 (163)
|.++|||++||--.-||+|++|||+++.++.-.-..-+-...++.+.|+|+|++
T Consensus 142 V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 142 IKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp CCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred ECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 568999999990000999999999999981000000000001788999999864
No 200
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.46 E-value=0.00067 Score=43.93 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=44.7
Q ss_pred ccceEEEeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEecCCC-CCCcceeceeecccc
Q psy18011 88 NENVWHILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSNS-WGGQGLLGVSIRFCS 151 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~p~~~-~~~~g~iG~~~~~~~ 151 (163)
+|. |++||+ ++|.+++... +++++.|++.| ++..+++++++... ..+.+.||+.+....
T Consensus 27 GD~---I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~~~~~~~~~~~~iGi~~~~~~ 93 (100)
T 3i18_A 27 GDL---ITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKH--GDKNEQADIKLTAIDKKGTPGIGITLVDDL 93 (100)
T ss_dssp TCE---EEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEE--TTEEEEEEEECEECSTTCCEECSEEEGGGC
T ss_pred CCE---EEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE--CCEEEEEEEEEecCCCCCCcEEeEEEecCC
Confidence 566 999998 7888888864 68999999998 66777777777532 235678999886544
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.36 E-value=0.00025 Score=59.41 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=42.4
Q ss_pred CCCCChhhhcCCccCCeEEEEECCEecCCChHHHHHHHHhCCCCeEEEEEE
Q psy18011 1 VQDNSPGQKAGLEAFFDFIVAIDNIRLDQDNDTLKELLKNGIDKELKMAVY 51 (163)
Q Consensus 1 V~~~SpA~~AGL~~~GD~I~~Ing~~v~~~~d~~~~~l~~~~~~~v~l~v~ 51 (163)
|.|+|+|+.+|+++ ||+|++|||++|.+..+ +.+++....++-+.|+..
T Consensus 422 V~~~s~a~~~g~~~-gdiI~~vNg~~V~s~~~-l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 422 VLANEVNIGYEDMN-NQQVLKFNGIPIRNIHH-LAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp ECCCGGGTTCSSCC-SEEEEEETTEECCSHHH-HHHHHHTCCSSEEEEEET
T ss_pred ecCCchhhhcCCCC-CCEEEeECCEEcCCHHH-HHHHHHHcCCCeEEEEEC
Confidence 46899999999999 99999999999999954 888998877777777654
No 202
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.27 E-value=0.001 Score=42.55 Aligned_cols=56 Identities=11% Similarity=0.198 Sum_probs=41.8
Q ss_pred ccceEEEeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEecCCC--CCCcceeceeec
Q psy18011 88 NENVWHILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSNS--WGGQGLLGVSIR 148 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~p~~~--~~~~g~iG~~~~ 148 (163)
+|. |++||+ .+|.++++.. +|+++.|++.| +++.++++++|... +.+..++|+.+.
T Consensus 25 GD~---Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~~~~~~~~~~~~~~~~~~~ 89 (94)
T 2kl1_A 25 GDR---IAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIR--DRKQHEAELVLKPFPHHPNQIGLGVTLE 89 (94)
T ss_dssp TCE---EEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEE--TTEEEEEEECCCBCSSCTTCBCCSCC--
T ss_pred CCE---EEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE--CCEEEEEEEEEeeCCCCCCCcEEEEEee
Confidence 566 999998 7888888875 79999999998 67788888888643 234567777654
No 203
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.16 E-value=0.0013 Score=41.46 Aligned_cols=56 Identities=16% Similarity=0.333 Sum_probs=41.5
Q ss_pred ccceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCCC--CC-Ccceeceeec
Q psy18011 88 NENVWHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNS--WG-GQGLLGVSIR 148 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~~--~~-~~g~iG~~~~ 148 (163)
+|. |+++|+ ++|.+++..++++++.|++.| ++..++++++|... .+ ..|++|+.+.
T Consensus 25 GD~---I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R--~g~~~~~~v~~~~~~~~~~~~g~~g~~~~ 89 (91)
T 2zpm_A 25 GDR---IVXVDGQPLTQWVTFVMLVRDNPGXSLALEIER--QGSPLSLTLIPESXPGNGXAIGFVGIEPX 89 (91)
T ss_dssp TCE---EEEETTEECCCHHHHHHHHHHCTTCCEEEEEEE--TTEEEEEEECCEEECCSSSCEEECCEECC
T ss_pred CCE---EEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEE--CCeEEEEEEEEeeecCCCceEEEEEEEEe
Confidence 555 999998 788888887788999999998 66778888887531 11 1467887653
No 204
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.53 E-value=0.0073 Score=40.75 Aligned_cols=56 Identities=9% Similarity=0.119 Sum_probs=38.8
Q ss_pred ccceEEEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEecCCCCCCcceeceeeccc
Q psy18011 88 NENVWHILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSIRFC 150 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~p~~~~~~~g~iG~~~~~~ 150 (163)
+|. |++||+ ++|.++++. .+++++.|+| | +++ +.+++.+...+.+.++||+.+...
T Consensus 45 GD~---Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R--~g~-~~v~l~~~~~~~~~~~lGi~~~~~ 107 (125)
T 2hga_A 45 GLV---IESINGMPTSNLTTYSAALKTISVGEVINITT-D--QGT-FHLKTGRNPNNSSRAYMGIRTSNH 107 (125)
T ss_dssp TCE---EEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-T--TEE-EEEECCBCSSSCCSCBCCEEEECC
T ss_pred CCE---EEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-E--CCE-EEEEEeccCCCCCceEEEEEecCC
Confidence 455 999998 778888874 5789999999 7 555 555554432223456899987654
No 205
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=96.20 E-value=0.017 Score=39.21 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=34.0
Q ss_pred EeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 94 ILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 94 I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
|+++|+ .+|.+++... +|+++.|+|.| +++.++++++|..
T Consensus 80 I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~~~~ 126 (134)
T 2l97_A 80 ITKVDDKEIASSTDLQSALYNHSIGDTIKITYYR--NGKEETTSIKLNK 126 (134)
T ss_dssp EEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEE--TTEEEEEEEECCC
T ss_pred EEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEE--CCEEEEEEEEEcc
Confidence 999998 6788888775 79999999998 6788899998854
No 206
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=96.20 E-value=0.0032 Score=42.37 Aligned_cols=82 Identities=21% Similarity=0.276 Sum_probs=48.1
Q ss_pred CCCCeEEEEEEECCCceEEEEEEccCCCCCCcceeeeEEeee------------cccc--------cccceEEEeeeCc-
Q psy18011 41 GIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSIRFC------------SFEG--------ANENVWHILDQDN- 99 (163)
Q Consensus 41 ~~~~~v~l~v~r~~~~~~~~v~~~~~~~~~~~~~lGl~~~~~------------~~~~--------~~~~~~~I~~v~~- 99 (163)
.+++++.++|+|++ +.+++.+.... ...+|+.+... ...+ ++|. |++||+
T Consensus 6 ~~g~~v~l~v~R~g--~~~~v~v~~~~----~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~---I~~vng~ 76 (128)
T 1uf1_A 6 SGDRRSTLHLLQGG--DEKKVNLVLGD----GRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQ---ILEVNGR 76 (128)
T ss_dssp STTTSCCSCCCCCS--SEEEEEEECCS----SCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCE---EEEETTE
T ss_pred CCCCEEEEEEEeCC--cEEEEEEEECC----CCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCE---EEEECCE
Confidence 35677888898887 44555554331 12355544321 0001 2344 999998
Q ss_pred -------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 100 -------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 100 -------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
.++.+.++ .++++.|+|.| ++...+++++|..
T Consensus 77 ~v~~~~~~~~~~~~~--~~~~v~l~v~R--~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 77 SFLNILHDEAVRLLK--SSRHLILTVKD--VGRLPHARTTVDE 115 (128)
T ss_dssp ECSSCCHHHHHHHHT--TCSEEEEEEEC--CSCCSSCSCCCCS
T ss_pred ECCCCCHHHHHHHHh--cCCeEEEEEEE--CCccccccccccc
Confidence 23444444 36799999998 5555666667653
No 207
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=95.63 E-value=0.035 Score=35.28 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=38.7
Q ss_pred ccceEEEeeeCc------hHHHHHHHccC-CCeEEEEEEeCCCCeEEEEEEecCC---CCC--C-cceeceee
Q psy18011 88 NENVWHILDQDN------DTLKELLKNGI-DKELKMAVYSSKTQDVRTVNITPSN---SWG--G-QGLLGVSI 147 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~~-~~~v~l~v~r~~~~~~~~v~v~p~~---~~~--~-~g~iG~~~ 147 (163)
+|. |++||+ ++|...+..+. ++++.|+|.|++.+..+++++.... +.. . ...||+.+
T Consensus 23 GD~---I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~~~~~~~~~~~l~~lGl~p 92 (95)
T 3id1_A 23 GTE---LKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRP 92 (95)
T ss_dssp TCE---EEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTTCCCCTTTSCHHHHTTEEE
T ss_pred CCE---EEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccccccCCCCCCHHHHcCccC
Confidence 556 999998 78888887665 4899999999765455666666543 111 1 34577765
No 208
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=95.32 E-value=0.063 Score=33.36 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=30.8
Q ss_pred ccceEEEeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEe
Q psy18011 88 NENVWHILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNIT 132 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~ 132 (163)
+|. |++||+ .+|.++++.. +++++.|+|.| +++.++++++
T Consensus 40 GD~---I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R--~g~~~~~~v~ 86 (87)
T 2i6v_A 40 GDM---AVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER--DGQQHDVYIQ 86 (87)
T ss_dssp TCE---EEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEE--TTEEEEEEEE
T ss_pred CCE---EEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE--CCEEEEEEEE
Confidence 556 999998 6788888764 68899999998 5666666654
No 209
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=95.06 E-value=0.083 Score=34.04 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=31.7
Q ss_pred cccceEEEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEe
Q psy18011 87 ANENVWHILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNIT 132 (163)
Q Consensus 87 ~~~~~~~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~ 132 (163)
++|. |++||+ .+|.++++. .+++++.|+|.| +++.++++++
T Consensus 57 ~GDv---I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R--~g~~~~~~v~ 104 (105)
T 2i4s_A 57 DGDM---AVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER--DGQQHDVYIQ 104 (105)
T ss_dssp TTCE---EEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEE--TTEEEEEEEE
T ss_pred CCCE---EEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEE--CCEEEEEEEe
Confidence 3566 999998 778888876 468999999998 5666666654
No 210
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=94.02 E-value=0.17 Score=32.68 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=29.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEec
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 133 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p 133 (163)
.|++||+ +++.++++..+++++.|.+.|++... .+++.|
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~--~~~~~~ 96 (112)
T 1qau_A 50 IILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF--TTHLET 96 (112)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCTTS--EEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCccc--ceEeee
Confidence 4999987 67888888778899999999965544 444444
No 211
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=93.46 E-value=0.16 Score=39.27 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=32.9
Q ss_pred EEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|+++|+ .+|.++++. .+|+++.|+|.| +++.++++++|.
T Consensus 267 ~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~~~ 313 (318)
T 1te0_A 267 LIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR--DDKQLTLQVTIQ 313 (318)
T ss_dssp CEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEES--SSCEEEEEEECE
T ss_pred EEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEE--CCEEEEEEEEEc
Confidence 3899988 788888886 589999999998 667778888774
No 212
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=93.39 E-value=0.13 Score=34.18 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=31.0
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
|++||+ +++.++++..+++++.|.+.| ++..+.+++++..
T Consensus 58 I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R--~g~~~~~~~~~~~ 105 (127)
T 1b8q_A 58 ILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR--GPEGFTTHLETTF 105 (127)
T ss_dssp CCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEEC--CCCSEEECCCCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEe--CCceEEEEEEEEe
Confidence 888887 678888888788999999998 4455666666643
No 213
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=93.37 E-value=0.21 Score=32.34 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=32.7
Q ss_pred ccceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 88 NENVWHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
+|. |+++|+ .+|.++++. ++++.|+|.| ++..++++++|..
T Consensus 56 GD~---I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R--~g~~~~~~v~~~~ 102 (113)
T 2pzd_A 56 GDV---ILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRR--GRETLTLYVTPEV 102 (113)
T ss_dssp TCE---EEEETTEECCSHHHHHHHHHH--CSSEEEEEEE--TTEEEEEEECCEE
T ss_pred CCE---EEEECCEECCCHHHHHHHHhC--CCeEEEEEEE--CCEEEEEEEEEee
Confidence 566 999988 677888875 6889999998 6777888888753
No 214
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=93.15 E-value=0.12 Score=32.03 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=21.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEec
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 133 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p 133 (163)
.|++||+ +++.++++.. +.++.|+|.| ++....+++.|
T Consensus 47 ~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r--~g~~~~~~v~p 92 (92)
T 3cyy_A 47 VVLKINGTVTENMSLTDAKTLIERS-KGKLKMVVQR--DERATLLNVPD 92 (92)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEEC-------------
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEe--CCceeeeeCCC
Confidence 4999988 5777778764 4589999998 55556666554
No 215
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=92.96 E-value=0.23 Score=38.97 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=33.7
Q ss_pred EEeeeCc------hHHHHHHHcc-CCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 93 HILDQDN------DTLKELLKNG-IDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~~-~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
.|+++|+ .+|.+++... +|+++.|+|.| +++.+++++++..
T Consensus 286 vI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~l~~ 333 (345)
T 3stj_A 286 IITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLR--NGKPLEVEVTLDT 333 (345)
T ss_dssp EECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEE--TTEEEEEEEECEE
T ss_pred EEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE--CCEEEEEEEEEcc
Confidence 4888888 7888888774 79999999999 6777888887753
No 216
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=92.73 E-value=0.2 Score=32.44 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=32.0
Q ss_pred ccceEEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 88 NENVWHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 88 ~~~~~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
+|. |+++|+ .+|.++++ +++++.|+|.| ++..++++++|..
T Consensus 56 GD~---I~~ing~~v~~~~~~~~~l~--~g~~v~l~v~R--~g~~~~~~v~~~~ 102 (112)
T 2p3w_A 56 GDI---IVKVNGRPLVDSSELQEAVL--TESPLLLEVRR--GNDDLLFSIAPEV 102 (112)
T ss_dssp TCE---EEEETTEECCSHHHHHHHHH--HCSSEEEEEEE--TTEEEEEEECCEE
T ss_pred CCE---EEEECCEECCCHHHHHHHHh--CCCeEEEEEEE--CCEEEEEEEEEee
Confidence 566 999998 67777774 47889999998 6677888888753
No 217
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=92.23 E-value=0.26 Score=32.48 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=27.0
Q ss_pred ccceEEEeeeCc--------hHHHHHHHccC-CCeEEEEEEeCCC
Q psy18011 88 NENVWHILDQDN--------DTLKELLKNGI-DKELKMAVYSSKT 123 (163)
Q Consensus 88 ~~~~~~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~~~ 123 (163)
+|. |++||+ ++++++|++.+ |.++.|+|.|++.
T Consensus 53 GD~---Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 53 GDI---IKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp TCE---EEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred CCE---EEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 455 999998 68999999765 8899999999554
No 218
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=92.03 E-value=0.24 Score=31.23 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=24.9
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++..+ ++++.|+|.|++
T Consensus 53 ~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 53 LIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCS
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 3999988 67888998875 899999999843
No 219
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=91.97 E-value=0.21 Score=33.94 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=25.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNIT 132 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~ 132 (163)
.|++||+ +++.++++..+|+++.|+|.|+ +....+.++
T Consensus 87 ~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~--g~~~~v~~~ 132 (139)
T 2vz5_A 87 KIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ--SLQKAVQQS 132 (139)
T ss_dssp EEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEEC--C-------C
T ss_pred EEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEEC--CEEEEEEEe
Confidence 3999988 5788888877789999999994 444444443
No 220
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=91.78 E-value=0.29 Score=38.32 Aligned_cols=40 Identities=15% Similarity=0.271 Sum_probs=31.7
Q ss_pred EEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|++||+ ++|.+++.. .+|+++.|+|.| +++.+++++++.
T Consensus 285 vI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~l~ 331 (348)
T 3qo6_A 285 IITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLR--GDHKEKISVTLE 331 (348)
T ss_dssp EECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEEC--SSSEEEEEEECE
T ss_pred EEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEE--CCEEEEEEEEEc
Confidence 4999998 788888865 479999999998 556667777664
No 221
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=91.72 E-value=0.52 Score=39.86 Aligned_cols=41 Identities=15% Similarity=0.321 Sum_probs=34.8
Q ss_pred EEeeeCc-----hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 93 HILDQDN-----DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 93 ~I~~v~~-----~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
.|++||+ .+|.++++. .+|+++.|+|.| +++.+++++++..
T Consensus 519 ~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R--~g~~~~~~v~l~~ 565 (597)
T 4fgm_A 519 KIIAIDHLQATEQSVKRILERYIPGDTVTIHAFR--RDELMTLELTWQE 565 (597)
T ss_dssp EEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEE--TTEEEEEEEECCC
T ss_pred EEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEE--CCEEEEEEEEecC
Confidence 4999998 689999986 579999999999 6788888888865
No 222
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=90.52 E-value=0.41 Score=30.50 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=22.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|++||+ .++...++. .+.++.|+|.| ++....+.++|.
T Consensus 57 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R--~~~~~~~~~~p~ 103 (105)
T 2awx_A 57 KLLAVNSVSLEEVTHEEAVTALKN-TSDFVYLKVAK--PTSMYISRHHHH 103 (105)
T ss_dssp EEEEETTEECTTCBHHHHHHHHHS-CCSEEEEEEEC--CCC---------
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc--CCCCCCcccccc
Confidence 4999998 455566665 47899999998 555566666663
No 223
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=90.34 E-value=1.1 Score=28.62 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=28.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC-CeEEEEEEec
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKT-QDVRTVNITP 133 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~-~~~~~v~v~p 133 (163)
.|++||+ .++..+++. ++.++.|+|.|++. ....+++++.
T Consensus 56 ~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~~~~~~v~l~~ 104 (106)
T 4amh_A 56 KLLAVNNVALEEVTHEEAVTALKN-TSDFVYLKVAKPGSGEKIMEIKLIK 104 (106)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHS-CCSEEEEEEECCSSSCSEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeCCCCCeEEEEEEec
Confidence 3999998 456667765 56799999999653 4566666653
No 224
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=90.21 E-value=0.48 Score=30.61 Aligned_cols=30 Identities=10% Similarity=0.275 Sum_probs=25.1
Q ss_pred EEeeeCc--------hHHHHHHHccC---CCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGI---DKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~---~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++|++.+ ++++.|.+.|.+
T Consensus 65 ~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 65 QLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp BEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 3999998 68889998877 889999999854
No 225
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=90.21 E-value=0.13 Score=32.82 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=29.2
Q ss_pred ccceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 88 NENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 88 ~~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
+|. |++||+ .++..+++. .++++.|+|.| ++...+++++|.
T Consensus 50 GD~---I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R--~g~~~~~~v~p~ 98 (103)
T 1wf7_A 50 GDV---VLSIDGISAQGMTHLEAQNKIKA-CTGSLNMTLQR--ASAAAKSEPVSS 98 (103)
T ss_dssp TCB---EEEETTEECSSCCHHHHHHHHHH-CSSEEEEEECC--CSCCCCCCCCCC
T ss_pred CCE---EEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe--CCCcCCCCCCCC
Confidence 455 999998 445566665 47899999988 555566777774
No 226
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=90.12 E-value=0.97 Score=31.21 Aligned_cols=52 Identities=15% Similarity=0.334 Sum_probs=33.8
Q ss_pred EEeeeCc------hH-H-HHHHHccCCCeEEEEEEeCCCCeEEEEEEecCCCCCCcceeceeeccc
Q psy18011 93 HILDQDN------DT-L-KELLKNGIDKELKMAVYSSKTQDVRTVNITPSNSWGGQGLLGVSIRFC 150 (163)
Q Consensus 93 ~I~~v~~------~~-l-~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~~~~~~g~iG~~~~~~ 150 (163)
.|++||+ .+ + ..+++..+++++.|+|.| .++.+++++++.. .+.+|+.+..+
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~--~~~~~~v~l~~~~----~~~lG~~~~~g 109 (166)
T 1w9e_A 50 QVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRD--RPFERTITMHKDS----TGHVGFIFKNG 109 (166)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEEC--CTTCEEEEEECCT----TSCCSEEEETT
T ss_pred EEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEc--CCCcEEEEEecCC----CCcEeEEEeCC
Confidence 3999998 33 4 456666678899999943 3355777777632 23467766533
No 227
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=89.97 E-value=0.25 Score=30.89 Aligned_cols=31 Identities=3% Similarity=0.144 Sum_probs=24.7
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
.|++||+ +++.++++.. ++++.|+|.|++..
T Consensus 53 ~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 53 RLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDPEAD 91 (96)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECCCTT
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECCCCc
Confidence 4999998 6778888874 89999999985543
No 228
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=89.97 E-value=1.2 Score=27.47 Aligned_cols=27 Identities=7% Similarity=0.289 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ ++..++|+ .++..++|+|..
T Consensus 46 ~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 46 NICEINGQNVIGLKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp EEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred EEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEEe
Confidence 3999998 78889999 578889998863
No 229
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=89.55 E-value=0.45 Score=29.40 Aligned_cols=29 Identities=14% Similarity=0.368 Sum_probs=22.9
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. ++++.|+|.|.+
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~ 86 (91)
T 2vsp_A 50 VIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGKK 86 (91)
T ss_dssp EEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC--
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeCC
Confidence 3999987 6788888876 899999999843
No 230
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=89.48 E-value=0.66 Score=35.93 Aligned_cols=38 Identities=18% Similarity=0.358 Sum_probs=31.2
Q ss_pred EEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|+++|+ ++|.++++. ++++.|+|.| +++.++++++|.
T Consensus 279 vI~~ing~~v~~~~~l~~~l~~--~~~v~l~v~R--~g~~~~~~v~~~ 322 (325)
T 1lcy_A 279 VILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRR--GRETLTLYVTPE 322 (325)
T ss_dssp EEEEETTEECCSHHHHHHHHTT--CSSEEEEEEE--TTEEEEEEECCE
T ss_pred EEEEECCEEcCCHHHHHHHHhC--CCeEEEEEEE--CCEEEEEEEEEe
Confidence 4888887 788888875 6899999998 678888888874
No 231
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.82 E-value=0.13 Score=34.03 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=27.9
Q ss_pred EEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEE
Q psy18011 93 HILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVN 130 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~ 130 (163)
.|++||+ ++|.++++..+++++.|+|.| ++..+...
T Consensus 72 ~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R--~g~~~~~~ 113 (124)
T 1wh1_A 72 RIIQINGIEVQNREEAVALLTSEENKNFSLLIAR--PELQLDEG 113 (124)
T ss_dssp EEEEESSCBCCSHHHHHHHHTCSSCCSCCEEEEE--CSSCCCCC
T ss_pred EEEEECCEECCCHHHHHHHHHhCCCCEEEEEEEE--CCEEeecc
Confidence 4999998 788899988778999999998 44434433
No 232
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=88.77 E-value=0.55 Score=28.96 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=24.4
Q ss_pred EEeeeCc------h--HHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN------D--TLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~------~--~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ . ++.++++. +++++.|+|.|++
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g 86 (91)
T 2pkt_A 50 VITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSE 86 (91)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 3999998 3 78888887 8999999999844
No 233
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.71 E-value=0.096 Score=33.86 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=28.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
.|++||+ .++..+++. .++++.|.|.| ++....++++|..
T Consensus 60 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R--~~~~~~~~v~~~~ 107 (110)
T 1um1_A 60 RILEVNGSSLLGLGYLRAVDLIRH-GGKKMRFLVAK--SDVETAKKIHSGP 107 (110)
T ss_dssp EEEEESSCBCSSCCHHHHHHHHHT-CCSEEEEEEEC--CCHHHHHHHSSCS
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe--CCcceeEEEEecC
Confidence 4999998 455566665 58899999998 5555666666653
No 234
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=88.66 E-value=0.62 Score=28.74 Aligned_cols=28 Identities=14% Similarity=0.341 Sum_probs=23.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.+++++.++ ++.|+|.|.
T Consensus 49 ~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~ 84 (88)
T 1kwa_A 49 EIREINGISVANQTVEQLQKMLREMRG-SITFKIVPS 84 (88)
T ss_dssp EEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEECC
Confidence 3999998 778899988776 899999874
No 235
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=87.92 E-value=0.93 Score=27.60 Aligned_cols=28 Identities=7% Similarity=0.144 Sum_probs=23.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++..+ +++.|+|.|+
T Consensus 49 ~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 84 (87)
T 2pa1_A 49 IIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRI 84 (87)
T ss_dssp EEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEec
Confidence 3999987 67888888766 8999999984
No 236
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=87.86 E-value=0.62 Score=29.04 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=24.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. +++++.|+|.|++
T Consensus 56 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 92 (97)
T 2jil_A 56 RLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEYDV 92 (97)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4999998 678888887 8999999999854
No 237
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=87.64 E-value=1.1 Score=34.59 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=31.1
Q ss_pred EEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|++||+ .+|.+++.. .+|+++.|+|.|. +++.++++++|.
T Consensus 265 ~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~-~g~~~~~~v~~~ 312 (324)
T 1y8t_A 265 VVTKVDDRPINSADALVAAVRSKAPGATVALTFQDP-SGGSRTVQVTLG 312 (324)
T ss_dssp EEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECS-SCCEEEEEEECE
T ss_pred EEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEEC-CCCEEEEEEEEc
Confidence 4999998 678888876 4799999999871 345567777764
No 238
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=87.64 E-value=0.97 Score=27.57 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=23.2
Q ss_pred EEeeeCc--------hHHHHHHHc-cCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKN-GIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~-~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. .+++++.|+|.|+
T Consensus 48 ~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 48 LIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQ 85 (88)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEE
T ss_pred EEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeC
Confidence 3999998 577778874 4789999999984
No 239
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=87.62 E-value=0.48 Score=31.18 Aligned_cols=30 Identities=7% Similarity=0.276 Sum_probs=24.6
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++..+ ++++.|+|.|+.
T Consensus 69 ~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 69 RVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDV 107 (122)
T ss_dssp CEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECC
Confidence 3899987 67888888765 899999999844
No 240
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=87.21 E-value=0.95 Score=28.20 Aligned_cols=28 Identities=18% Similarity=0.401 Sum_probs=23.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++. +++++.|+|.|+
T Consensus 61 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 96 (98)
T 1ihj_A 61 RILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTF 96 (98)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeC
Confidence 4999998 567778876 899999999984
No 241
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=86.96 E-value=1.2 Score=27.66 Aligned_cols=29 Identities=14% Similarity=0.221 Sum_probs=23.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++ .+++++.|+|.|++
T Consensus 54 ~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 54 RILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQT 90 (97)
T ss_dssp EEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeCC
Confidence 4999998 56777777 57899999999844
No 242
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=86.71 E-value=1.6 Score=34.65 Aligned_cols=42 Identities=19% Similarity=0.363 Sum_probs=31.9
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC-eEEEEEEecC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ-DVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~-~~~~v~v~p~ 134 (163)
.|++||+ +++.++++..+|+++.|+|.|.+.. ..+++++++.
T Consensus 122 ~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 122 VIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp EEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred EEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 4999998 4677888877899999999984321 2778888764
No 243
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=86.54 E-value=0.75 Score=30.25 Aligned_cols=32 Identities=13% Similarity=0.383 Sum_probs=25.5
Q ss_pred ccceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 88 NENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 88 ~~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
+|. |++||+ ++|.++++.. ++++.|+|.|++.
T Consensus 67 GD~---Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~g~ 106 (118)
T 2yub_A 67 GDR---ILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHDPV 106 (118)
T ss_dssp TCC---EEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEECSS
T ss_pred CCE---EEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEECCE
Confidence 455 999998 5788888877 8899999998443
No 244
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=86.53 E-value=1.1 Score=27.10 Aligned_cols=28 Identities=4% Similarity=0.173 Sum_probs=22.2
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r 120 (163)
.|++||+ +++.++++..+ ++++.|+|.|
T Consensus 49 ~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 49 VIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 4999998 57778888754 8899999865
No 245
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=86.31 E-value=4.6 Score=25.57 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=25.9
Q ss_pred cccceEEEeeeCc--------hHHHHHHHccC-CCeEEEEEEeCC
Q psy18011 87 ANENVWHILDQDN--------DTLKELLKNGI-DKELKMAVYSSK 122 (163)
Q Consensus 87 ~~~~~~~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~~ 122 (163)
.+|. |++||+ +++++++++.+ +.+++|.+.+..
T Consensus 49 vGD~---I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~ 90 (95)
T 3gge_A 49 VGDH---IESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPK 90 (95)
T ss_dssp TTCE---EEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred CCCE---EEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECcc
Confidence 4566 999998 89999999865 678888887643
No 246
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=86.12 E-value=1.4 Score=27.43 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=24.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
.|++||+ +++..+++ .+++++.|++.|.++.
T Consensus 57 ~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 57 LITHINGESVLGLVHMDVVELLL-KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEECSCSS
T ss_pred EEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEECCCc
Confidence 3999988 66777777 4789999999985443
No 247
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=85.69 E-value=1.4 Score=28.81 Aligned_cols=29 Identities=7% Similarity=0.169 Sum_probs=24.2
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++..+ ++++.|+|.|+
T Consensus 68 ~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 105 (123)
T 1ueq_A 68 VIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRG 105 (123)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEES
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4999998 67888888764 89999999984
No 248
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=85.54 E-value=0.98 Score=28.87 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=24.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++..++.++.|+|.|.
T Consensus 68 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 68 RLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp EEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 3999998 6788888887778999999874
No 249
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=85.48 E-value=0.87 Score=28.74 Aligned_cols=28 Identities=0% Similarity=0.156 Sum_probs=23.7
Q ss_pred EEeeeCc--------hHHHHHHHcc-CCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNG-IDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~-~~~~v~l~v~r 120 (163)
.|++||+ +++.++++.. ++.++.|+|.|
T Consensus 61 ~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 97 (101)
T 2yt7_A 61 RLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVH 97 (101)
T ss_dssp EEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 4999998 7888999875 78999999976
No 250
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=85.34 E-value=1.5 Score=28.68 Aligned_cols=29 Identities=10% Similarity=0.454 Sum_probs=23.5
Q ss_pred EEeeeCc--------hHHHHHHHcc-CCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNG-IDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~-~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++.. +++++.|+|.|+
T Consensus 82 ~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 82 RLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred EEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 4999998 5777888875 489999999984
No 251
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=85.20 E-value=1.3 Score=29.37 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=24.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++..+++++.|+|.|.
T Consensus 81 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~ 117 (130)
T 1i16_A 81 EILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRK 117 (130)
T ss_dssp CEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeC
Confidence 3999998 6778888887888999999884
No 252
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=85.17 E-value=1.6 Score=27.82 Aligned_cols=30 Identities=10% Similarity=0.452 Sum_probs=24.2
Q ss_pred EEeeeCc--------hHHHHHHHcc-CCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNG-IDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~-~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. +++++.|+|.|++
T Consensus 63 ~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 63 RLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4999998 5778888875 5899999999843
No 253
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=85.12 E-value=1.3 Score=27.81 Aligned_cols=28 Identities=14% Similarity=0.312 Sum_probs=23.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.+.++..+++++.|.|.|
T Consensus 68 ~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 68 KIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp EEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEc
Confidence 3999998 478888887788999999987
No 254
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=84.89 E-value=1.2 Score=29.68 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=24.1
Q ss_pred EEeeeCc--------hHHHHHHHc-cCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKN-GIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~-~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. .+|+++.|+|.|+
T Consensus 73 ~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 73 VLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp BEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred EEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 3999998 678888887 4699999999983
No 255
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=84.86 E-value=1.5 Score=27.55 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=24.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
.|++||+ +++.++++..+ .++.|+|.|.+.+
T Consensus 63 ~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~~ 101 (103)
T 2fcf_A 63 RIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSIIST 101 (103)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCCC
Confidence 4999998 57888888764 4899999985543
No 256
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=84.80 E-value=0.67 Score=29.37 Aligned_cols=30 Identities=10% Similarity=0.256 Sum_probs=23.9
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++..+ +.++.|+|.|++
T Consensus 58 ~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 58 ELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCC
Confidence 4999998 57778887754 889999999843
No 257
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=84.74 E-value=0.18 Score=39.21 Aligned_cols=40 Identities=15% Similarity=0.365 Sum_probs=0.0
Q ss_pred EEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCCC
Q psy18011 93 HILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSNS 136 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~~ 136 (163)
.|+++|+ ++|.++++. ++++.|+|.| +++.++++++|...
T Consensus 277 ~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R--~g~~~~~~v~p~~~ 322 (332)
T 3num_A 277 VIISINGQSVVSANDVSDVIKR--ESTLNMVVRR--GNEDIMITVIPEEI 322 (332)
T ss_dssp --------------------------------------------------
T ss_pred EEEEECCEECCCHHHHHHHHhC--CCeEEEEEEE--CCEEEEEEEEEeee
Confidence 4888888 667777764 7889999998 66778888998753
No 258
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=84.47 E-value=1.7 Score=26.56 Aligned_cols=29 Identities=10% Similarity=0.294 Sum_probs=23.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. +.++.|+|.|.+
T Consensus 51 ~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~ 87 (90)
T 2he4_A 51 RLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGPS 87 (90)
T ss_dssp EEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEccC
Confidence 3999987 5788888875 889999999843
No 259
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=84.42 E-value=1.5 Score=29.24 Aligned_cols=30 Identities=10% Similarity=0.308 Sum_probs=24.6
Q ss_pred EEeeeCc--------hHHHHHHHcc-CCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNG-IDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~-~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. +++.+.|+|.|.+
T Consensus 89 ~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 89 EVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 4999998 6788888876 6899999999843
No 260
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=84.41 E-value=1.6 Score=27.05 Aligned_cols=29 Identities=10% Similarity=0.207 Sum_probs=23.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++..+ +++.|+|.|++
T Consensus 53 ~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g 89 (94)
T 1vb7_A 53 IIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRSS 89 (94)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECC
Confidence 3999997 67788888765 88999999843
No 261
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=84.24 E-value=1.9 Score=26.19 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=21.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++.. ++++.|+|.|+
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 85 (88)
T 2uzc_A 50 VVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRE 85 (88)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 3999998 4666777754 88999999884
No 262
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=84.20 E-value=1.4 Score=29.10 Aligned_cols=29 Identities=3% Similarity=0.172 Sum_probs=24.2
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++..+ ++++.|+|.|+
T Consensus 67 ~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 104 (129)
T 2kpk_A 67 VIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRG 104 (129)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4999998 57888888765 89999999984
No 263
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=84.19 E-value=1.3 Score=28.40 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=23.7
Q ss_pred EEeeeCc--------hHHHHHHHcc--CCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNG--IDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~--~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. +++++.|+|.|..
T Consensus 57 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 57 MLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSG 96 (108)
T ss_dssp EEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCC
Confidence 4999998 6788888876 4567999999843
No 264
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=84.05 E-value=0.97 Score=28.60 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=23.7
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
|++||+ +++.++++.. ++++.|+|.|++.
T Consensus 53 I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 53 ILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAET 89 (103)
T ss_dssp EEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTT
T ss_pred EEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCe
Confidence 999987 6778888876 8999999998543
No 265
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=83.60 E-value=1.6 Score=28.17 Aligned_cols=29 Identities=28% Similarity=0.250 Sum_probs=23.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.+++++.+++++.|+|.|.
T Consensus 67 ~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 67 YIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 3999997 5788888877777799999874
No 266
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=83.42 E-value=2 Score=27.12 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=23.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
.|++||+ .++.++++.. +.++.|+|.|...
T Consensus 62 ~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 99 (105)
T 1wha_A 62 RVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLEREAG 99 (105)
T ss_dssp EEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCC
Confidence 4999998 5667777754 7889999998543
No 267
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=83.05 E-value=1.5 Score=28.30 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=23.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. +++++.|+|.|.
T Consensus 67 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 102 (114)
T 1uew_A 67 RILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQ 102 (114)
T ss_dssp BEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 3999998 678888886 889999999884
No 268
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=82.86 E-value=0.3 Score=31.61 Aligned_cols=40 Identities=8% Similarity=0.155 Sum_probs=27.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPSN 135 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~~ 135 (163)
.|++||+ .++..+++. +++++.|.|.|+ +...+++++|..
T Consensus 59 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~--~~~~~~~v~p~~ 106 (113)
T 2g5m_B 59 LLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGRE--RPGEQSEVAQLI 106 (113)
T ss_dssp BEEEETTEECSSCCHHHHHHHHHH-SCSSCEEEEEEC--CCCTTSSCSSCC
T ss_pred EEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeC--CCCCcchhhhhh
Confidence 3999998 455566665 588999999984 444555666643
No 269
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=82.36 E-value=1.7 Score=28.57 Aligned_cols=29 Identities=21% Similarity=0.395 Sum_probs=24.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. ++.++.|.|.|++
T Consensus 70 ~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 70 KIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVRRK 106 (129)
T ss_dssp BEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEEES
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4999997 678888887 8899999999854
No 270
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.34 E-value=1.9 Score=27.15 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. +++++.|+|.|++
T Consensus 62 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 98 (104)
T 2djt_A 62 LVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRPL 98 (104)
T ss_dssp BEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 3999998 456666665 7899999998843
No 271
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.01 E-value=2.7 Score=26.09 Aligned_cols=28 Identities=21% Similarity=0.462 Sum_probs=21.7
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
|++||+ .++..+++. +++++.|+|.|+.
T Consensus 54 Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 54 ILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp EEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred EEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 999998 445566665 7899999999854
No 272
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=81.62 E-value=0.96 Score=27.69 Aligned_cols=29 Identities=21% Similarity=0.219 Sum_probs=23.0
Q ss_pred EEeeeCc--------hHHHHHHHc-cCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKN-GIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~-~~~~~v~l~v~r~ 121 (163)
.|++||+ ++|.++++. .+++++.|+|.|+
T Consensus 51 ~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 51 EIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp EEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 3889887 677888876 3688999999984
No 273
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=81.53 E-value=1.8 Score=27.38 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=23.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. +++++.|+|.|.+
T Consensus 68 ~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 104 (108)
T 2jre_A 68 KILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRRL 104 (108)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 5999998 567777776 7889999999843
No 274
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=81.35 E-value=0.73 Score=29.07 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. +++++.|+|.|.+
T Consensus 53 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 89 (102)
T 2d90_A 53 LVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKE 89 (102)
T ss_dssp EEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECSTT
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 3999998 467777776 5889999998743
No 275
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=81.25 E-value=2 Score=27.88 Aligned_cols=28 Identities=11% Similarity=0.329 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++. +++++.|+|.|+
T Consensus 73 ~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 108 (117)
T 1ujd_A 73 QVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLD 108 (117)
T ss_dssp EEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESS
T ss_pred EEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEEC
Confidence 4999998 566777776 788999999984
No 276
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=81.02 E-value=3.5 Score=25.48 Aligned_cols=29 Identities=17% Similarity=0.507 Sum_probs=21.7
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. .++++.|+|.|++
T Consensus 54 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 90 (98)
T 2opg_A 54 QILEVNGIDLRKATHDEAINVLRQ-TPQRVRLTLYRDE 90 (98)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEECS
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEcCC
Confidence 4999998 456666665 4589999999854
No 277
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=81.01 E-value=2.8 Score=25.79 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=22.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++. +++++.|+|.|+
T Consensus 57 ~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 92 (96)
T 1d5g_A 57 RVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKG 92 (96)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcC
Confidence 4999998 566677775 688999999884
No 278
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=80.86 E-value=2.7 Score=25.49 Aligned_cols=29 Identities=10% Similarity=0.199 Sum_probs=21.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. .++++.|+|.|++
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 50 WVLSIDGENAGSLTHIEAQNKIRA-CGERLSLGLSRAI 86 (89)
T ss_dssp EEEEETTEEGGGCCHHHHHHHHHT-CTTEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEeCC
Confidence 3999998 455566665 4788999999843
No 279
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.04 E-value=2.9 Score=25.76 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=21.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++...++. +++++.|+|.|+
T Consensus 55 ~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (94)
T 2eeg_A 55 LIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSG 90 (94)
T ss_dssp EEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 3999998 345566665 788999999884
No 280
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=79.86 E-value=2.4 Score=27.48 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=23.5
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
|++||+ +++.++++. ++..+.|+|.|..
T Consensus 67 Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (117)
T 1v62_A 67 ILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILPVP 102 (117)
T ss_dssp EEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECCBT
T ss_pred EEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEECC
Confidence 999998 778888884 7899999998843
No 281
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=79.73 E-value=2.9 Score=24.64 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=20.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++.+++++.. .++.|+|.|
T Consensus 45 ~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R 79 (81)
T 2rcz_A 45 VVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQR 79 (81)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEe
Confidence 4888887 67777887644 489999987
No 282
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=79.40 E-value=2 Score=27.75 Aligned_cols=28 Identities=29% Similarity=0.290 Sum_probs=23.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.++++...++++.|+|.|
T Consensus 59 ~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 59 YIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 3999987 678888887778889999976
No 283
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=79.38 E-value=0.14 Score=33.99 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEE--EEEecC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRT--VNITPS 134 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~--v~v~p~ 134 (163)
.|++||+ +++.++++..++..+.|.+.|+ +.... ++++|.
T Consensus 56 ~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~--g~~~~~~~~l~~~ 105 (128)
T 2kjd_A 56 RIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE--TDEFFKKCRVIPS 105 (128)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHH--HHHHHHHHTCCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeC--CcceEEEEEEEec
Confidence 3999987 6788888887888899999884 44344 566664
No 284
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=78.41 E-value=3.1 Score=27.31 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=23.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
.|++||+ +++.++++.. +.++.|+|.|.+.
T Consensus 83 ~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 83 RIVEVDGMDLRDASHEQAVEAIRKA-GNPVVFMVQSIIS 120 (123)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHC-CSSEEEEEECCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 4999998 6788888865 4589999998544
No 285
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=78.41 E-value=3.6 Score=25.25 Aligned_cols=29 Identities=14% Similarity=0.257 Sum_probs=20.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
.|++||+ .++.+.++ +++++.|+|.|+..
T Consensus 52 ~I~~ing~~v~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 52 RIIKVNGTMVTNSSHLEVVKLIK--SGAYVALTLLGSSS 88 (93)
T ss_dssp EEEEETTEECSSSCHHHHHHHHT--SSSEEEEEEECCCC
T ss_pred EEEEECCEECCCCCHHHHHHhhc--CCCEEEEEEEECCC
Confidence 3999998 33344444 68999999998543
No 286
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=78.23 E-value=1.6 Score=28.52 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=22.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKT 123 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~ 123 (163)
.|++||+ .+...+++.. +..+.|+|.|++.
T Consensus 77 ~Il~VnG~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 77 RIVTICGTSTEGMTHTQAVNLLKNA-SGSIEMQVVAGGD 114 (120)
T ss_dssp EEEEETTEECTTCBHHHHHHHHHHC-CSEEEEEEECCTT
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 4999998 5666777764 5679999998543
No 287
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=78.19 E-value=2.4 Score=27.93 Aligned_cols=30 Identities=10% Similarity=0.286 Sum_probs=23.7
Q ss_pred EEeeeCc--------hHHHHHHHcc------CCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNG------IDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~------~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++.. ++.++.|+|.|..
T Consensus 79 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 79 QLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp BEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred EEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 3999998 5788888864 5889999999843
No 288
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=78.02 E-value=4.2 Score=25.75 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=20.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .+....++. +++++.|+|.|++
T Consensus 69 ~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 105 (110)
T 1x5q_A 69 KLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRES 105 (110)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEECS
T ss_pred EEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEECC
Confidence 3999998 223344444 7999999999943
No 289
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=77.45 E-value=2.7 Score=27.46 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=23.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. .+.++.|+|.|.+
T Consensus 77 ~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~v~R~~ 113 (118)
T 3b76_A 77 ILLNVDGVELTEVSRSEAVALLKR-TSSSIVLKALEVK 113 (118)
T ss_dssp EEEEETTEEGGGSCHHHHHHHHHS-CCSEEEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4999998 677888886 4778999998843
No 290
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=77.21 E-value=2.4 Score=26.06 Aligned_cols=28 Identities=14% Similarity=0.332 Sum_probs=21.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++. ++.++.|+|.|+
T Consensus 57 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~ 92 (97)
T 2iwn_A 57 QIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRR 92 (97)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 4999998 455666665 789999999884
No 291
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=76.71 E-value=2.1 Score=26.73 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++ .+++++.|+|.|++
T Consensus 60 ~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~~ 96 (103)
T 1wfv_A 60 QIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRGT 96 (103)
T ss_dssp EEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECTT
T ss_pred EEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEECC
Confidence 4999998 45666666 46889999999843
No 292
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=76.67 E-value=4 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=22.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. ++.++.|.|.|++
T Consensus 58 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 58 CVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRRQ 94 (102)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4999998 456666765 6899999999844
No 293
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=76.54 E-value=3.9 Score=25.53 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=21.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++.. +..+.|+|.|.
T Consensus 59 ~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 94 (100)
T 1whd_A 59 TVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRV 94 (100)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 3999998 5677778764 45599999884
No 294
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=76.45 E-value=2.3 Score=26.94 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=22.5
Q ss_pred EeeeCc--------hHHHHHHHcc----CCCeEEEEEEeC
Q psy18011 94 ILDQDN--------DTLKELLKNG----IDKELKMAVYSS 121 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~----~~~~v~l~v~r~ 121 (163)
|++||+ +++.++++.. +++++.+.|.|.
T Consensus 57 Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 57 ILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEF 96 (103)
T ss_dssp CCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCC
T ss_pred EEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEc
Confidence 899998 6677888764 688999999873
No 295
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=76.12 E-value=4 Score=25.35 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. .++++.|+|.|.+
T Consensus 61 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 97 (101)
T 2jik_A 61 KILSVNGQDLKNLLHQDAVDLFRN-AGYAVSLRVQHRL 97 (101)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHT-CCSEEEEEEEEES
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeCC
Confidence 4999998 456667765 5788999998843
No 296
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=76.00 E-value=4.3 Score=24.22 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=19.8
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
|++||+ .++...++. +++++.|+|.|+
T Consensus 49 I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 83 (85)
T 1rgw_A 49 VVAIDGVNTDTMTHLEAQNKIKS-ASYNLSLTLQKS 83 (85)
T ss_dssp EEEETTEECTTCCHHHHHHHHTT-CSSCEEEEEESC
T ss_pred EEEECCEECCCcCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 999998 455566654 466799999873
No 297
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=75.82 E-value=4.9 Score=25.25 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. +++++.|+|.|++
T Consensus 62 ~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 98 (106)
T 3axa_A 62 QLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQG 98 (106)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4999998 455666665 7899999999843
No 298
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=75.74 E-value=1.9 Score=26.83 Aligned_cols=29 Identities=14% Similarity=0.252 Sum_probs=23.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++..+++.+.|+|.|+
T Consensus 56 ~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (98)
T 2jxo_A 56 RIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (98)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHH
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 3999988 6788888887788888998873
No 299
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=75.65 E-value=4 Score=25.89 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=23.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
.|++||+ +++.++++. .++.+.|+|.|+...
T Consensus 62 ~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 62 HILKIGGTNVQGMTSEQVAQVLRN-CGNSVRMLVARDPAG 100 (111)
T ss_dssp EEEEESSCCCTTSCHHHHHHHHHH-HCSEEEEEEEESCTT
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeCCCC
Confidence 4999998 567777775 578999999985433
No 300
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=75.26 E-value=4.7 Score=35.70 Aligned_cols=42 Identities=17% Similarity=0.216 Sum_probs=34.0
Q ss_pred EEEeeeCc------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 92 WHILDQDN------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 92 ~~I~~v~~------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
-.|++||+ .++.++++..+|+++.|+|.|.+ +..++++++|.
T Consensus 779 D~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r~~-~~~~~~~~~~~ 826 (1045)
T 1k32_A 779 YLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSGKG-GDKRDLMIDIL 826 (1045)
T ss_dssp CEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEECSS-SCEEEEEEECB
T ss_pred CEEEEECCEEccchhhHHHhhcCCCCCEEEEEEECCC-CceEEEEEEEc
Confidence 34999998 57788898888999999999854 46678888873
No 301
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=75.23 E-value=3.4 Score=25.30 Aligned_cols=28 Identities=4% Similarity=0.273 Sum_probs=22.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.+++++..+ ++.|+|.+.
T Consensus 52 ~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~~ 87 (93)
T 3o46_A 52 ELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIPG 87 (93)
T ss_dssp EEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEeC
Confidence 3999988 788888887554 899998863
No 302
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=75.05 E-value=1.1 Score=29.41 Aligned_cols=40 Identities=18% Similarity=0.377 Sum_probs=25.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEecC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITPS 134 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p~ 134 (163)
.|++||+ .++..+++. .+.++.|+|.|.+ .....++++|.
T Consensus 75 ~Il~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~-~~~~~~~~~P~ 122 (124)
T 2daz_A 75 ELLEINNQILYGRSHQNASAIIKT-APSKVKLVFIRNE-DAVNQMASGPS 122 (124)
T ss_dssp EECEESSCBCTTSCHHHHHHHHHH-SCSEEEEEEEECT-THHHHBCCCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC-CcccccccCCC
Confidence 4999998 445566665 4569999999843 22234555553
No 303
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=74.86 E-value=4.8 Score=24.71 Aligned_cols=29 Identities=17% Similarity=0.416 Sum_probs=20.2
Q ss_pred EEeeeCc------hHH--HHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN------DTL--KELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~------~~l--~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++ ...++. ++.++.|+|.|++
T Consensus 57 ~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 93 (97)
T 2w4f_A 57 KLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRER 93 (97)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEECCS
T ss_pred EEEEECCEECCCcCHHHHHHHHhC-CCCeEEEEEEeCC
Confidence 3999998 333 333343 7999999999843
No 304
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=74.59 E-value=5.2 Score=25.87 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=21.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++.. +.++.|+|.|+
T Consensus 77 ~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 112 (117)
T 2fne_A 77 QIIAVNGQSLEGVTHEEAVAILKRT-KGTVTLMVLSS 112 (117)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHC-CSSEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 4999998 5677777764 45699999984
No 305
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=74.40 E-value=6.2 Score=24.00 Aligned_cols=28 Identities=14% Similarity=0.286 Sum_probs=21.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++. .+..+.|+|.|.
T Consensus 47 ~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 82 (91)
T 2f5y_A 47 TVLQLNERPVEHWKCVELAHEIRS-CPSEIILLVWRM 82 (91)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 3999998 466777775 466899999984
No 306
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=74.35 E-value=4.7 Score=26.41 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=23.1
Q ss_pred EEeeeCc--------hHHHHHHHc-cCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKN-GIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~-~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.+++.. .+++++.|+|.|.
T Consensus 74 ~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 74 QILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 4999998 567777765 5789999999984
No 307
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=74.31 E-value=5.8 Score=24.15 Aligned_cols=28 Identities=21% Similarity=0.268 Sum_probs=20.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++..+++. .+.++.|+|.|+
T Consensus 57 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 92 (94)
T 2fe5_A 57 RLLAVNNTNLQDVRHEEAVASLKN-TSDMVYLKVAKP 92 (94)
T ss_dssp EEEEETTEECTTCBHHHHHHHHHT-CCSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcC
Confidence 4999998 455666665 456899999873
No 308
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=74.13 E-value=5.3 Score=25.50 Aligned_cols=29 Identities=17% Similarity=0.460 Sum_probs=21.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. .++++.|+|.|++
T Consensus 67 ~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 103 (116)
T 2dm8_A 67 QILEVNGVDLRNSSHEEAITALRQ-TPQKVRLVVYRDE 103 (116)
T ss_dssp EEEEETTEECSSSCHHHHHHHHHT-CCSEEEEEEECCS
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeCC
Confidence 4999998 566677775 4488999999843
No 309
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.12 E-value=5.4 Score=24.75 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=20.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.+.++. ++++.|+|.|++
T Consensus 59 ~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g 94 (100)
T 2eeh_A 59 KITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRMG 94 (100)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEECS
T ss_pred EEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEECC
Confidence 4999998 345555554 789999999843
No 310
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=73.66 E-value=4.8 Score=24.66 Aligned_cols=29 Identities=3% Similarity=0.258 Sum_probs=21.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .+....++. +++++.|.|.|++
T Consensus 53 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 53 RVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIARPG 89 (95)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEES
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 4999998 344555554 6899999999854
No 311
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=73.65 E-value=4.4 Score=25.87 Aligned_cols=27 Identities=22% Similarity=0.364 Sum_probs=21.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++.+.++. +++++.|+|.|
T Consensus 73 ~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R 107 (112)
T 2r4h_A 73 EILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKR 107 (112)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe
Confidence 4999998 455666665 68899999987
No 312
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=73.64 E-value=4.5 Score=25.85 Aligned_cols=38 Identities=11% Similarity=0.206 Sum_probs=26.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCCCCeEEEEEEec
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSKTQDVRTVNITP 133 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~~~~~~~v~v~p 133 (163)
.|++||+ .++.++++. +++++.|+|.| ++...+++++|
T Consensus 61 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R--~~~~~~~~~~~ 106 (114)
T 2edz_A 61 RVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLD--GDSYEKAVKNQ 106 (114)
T ss_dssp EEEEESSSBCSSSCHHHHHHHHHH-TCSEEEEEEEC--HHHHHHHHHHT
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE--CCcceehhhcC
Confidence 3999998 567777876 58999999998 44434444443
No 313
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=73.63 E-value=1.4 Score=28.49 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=21.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++..+++. +++++.|+|.|.
T Consensus 68 ~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 103 (117)
T 2csj_A 68 RVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRP 103 (117)
T ss_dssp EEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEE
T ss_pred EEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEEC
Confidence 3999998 455666665 688999999984
No 314
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=73.59 E-value=5.9 Score=24.86 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=23.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. +++.+.|+|.|..
T Consensus 66 ~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 66 RILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSVE 102 (107)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECSS
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 3999988 677788875 6889999999844
No 315
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=73.54 E-value=2.2 Score=25.97 Aligned_cols=29 Identities=10% Similarity=0.343 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccC-CCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGI-DKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~-~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++..+ +.++.|+|.|.
T Consensus 51 ~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 51 ELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp EEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 4999998 56777787654 45899999883
No 316
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=73.47 E-value=4.2 Score=25.50 Aligned_cols=28 Identities=14% Similarity=0.311 Sum_probs=22.9
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.++++ .+++++.|+|.|+
T Consensus 49 ~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 49 RVLRINGVFVDKEEHAQVVELVR-KSGNSVTLLVLDG 84 (106)
T ss_dssp EEEEETTEECTTSCHHHHHHHHH-HTTTEEEEEEECH
T ss_pred EEEEECCEECCCCCHHHHHHHHH-hCCCEEEEEEEEC
Confidence 3999998 47888888 4788999999873
No 317
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=73.45 E-value=4.1 Score=26.40 Aligned_cols=29 Identities=10% Similarity=0.130 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHcc---CCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNG---IDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~---~~~~v~l~v~r~ 121 (163)
+|++||+ +++.++++.. +++++.|+|.|.
T Consensus 67 ~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 67 EIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp EEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 3999998 5677777653 488999999983
No 318
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.44 E-value=2.6 Score=27.63 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=22.8
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
|++||+ +++.++++. .++++.|+|.|.+
T Consensus 85 I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 85 IIKVNGESVIGKTYSQVIALIQN-SDTTLELSVMPKD 120 (126)
T ss_dssp CCEETTEECSSCCHHHHHHHHHT-CTTEEEEECCCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 888887 678888886 4899999998743
No 319
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=73.11 E-value=6 Score=24.87 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=21.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. .+.++.|+|.|.+
T Consensus 64 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 64 QIVEVDGISLVGVTQNFAATVLRN-TKGNVRFVIGREK 100 (107)
T ss_dssp BEEEETTEECBSCCHHHHHHHHHH-CCSEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCC
Confidence 3999998 455566665 5899999999854
No 320
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=72.98 E-value=4.9 Score=25.22 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=21.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. ++++.|+|.|.
T Consensus 64 ~I~~ing~~v~~~~~~~~~~~l~~--~~~v~l~v~r~ 98 (104)
T 1wi2_A 64 QVLAVNDVDFQDIEHSKAVEILKT--AREISMRVRFF 98 (104)
T ss_dssp EEEEETTEECSSCCHHHHHHHHHH--SSSEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHhC--CCEEEEEEEEC
Confidence 3999998 677778876 78899999874
No 321
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=72.75 E-value=5.6 Score=24.35 Aligned_cols=28 Identities=14% Similarity=0.332 Sum_probs=20.9
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++..+++ .+++++.|+|.|+
T Consensus 57 ~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 57 KIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVRE 92 (95)
T ss_dssp EEEEETTEECTTCBHHHHHHHHH-HCCSEEEEEEEEE
T ss_pred EEEEECCEEcCCCCHHHHHHHhh-cCCCeEEEEEEeC
Confidence 3999998 34555565 4689999999984
No 322
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=72.61 E-value=6.6 Score=23.82 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=20.9
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++..+++. +++++.|+|.|.
T Consensus 53 ~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 88 (92)
T 2qg1_A 53 QILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGRI 88 (92)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcc
Confidence 4999998 455566664 678899999983
No 323
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=72.23 E-value=5.6 Score=24.96 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=21.6
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.++++.. ++++.|+|.+
T Consensus 60 ~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~ 94 (97)
T 2ejy_A 60 EILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIP 94 (97)
T ss_dssp EEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 3999987 7788888874 6788888875
No 324
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=71.97 E-value=5.6 Score=27.77 Aligned_cols=27 Identities=11% Similarity=0.270 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++.++++. .+..+.|+|.|
T Consensus 135 ~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R 169 (170)
T 3egg_C 135 LLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGR 169 (170)
T ss_dssp EEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEe
Confidence 3999998 677788886 77899999987
No 325
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=71.85 E-value=2.1 Score=27.55 Aligned_cols=29 Identities=10% Similarity=0.278 Sum_probs=22.0
Q ss_pred EEeeeCc---------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN---------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~---------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.++++. +++++.|+|.|++
T Consensus 73 ~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 73 QILAINGQALDQTITHQQAISILQK-AKDTVQLVIARGS 110 (117)
T ss_dssp EEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESSC
T ss_pred EEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeCC
Confidence 3888887 456666765 6889999999843
No 326
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=71.64 E-value=7.6 Score=23.44 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=20.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++..+++. .+.++.|+|.|
T Consensus 54 ~I~~ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 88 (90)
T 1qav_A 54 AILSVNGEDLSSATHDEAVQALKK-TGKEVVLEVKY 88 (90)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE
Confidence 4999998 455566665 57889999987
No 327
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=71.64 E-value=5.5 Score=25.46 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=22.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++... .++.|+|.|.+
T Consensus 72 ~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 108 (113)
T 1va8_A 72 EVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSS 108 (113)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 3999998 57888887644 68999998743
No 328
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=71.61 E-value=5.2 Score=26.00 Aligned_cols=29 Identities=7% Similarity=0.113 Sum_probs=22.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++.+++++.. ..+.|+|.|.+
T Consensus 69 ~Il~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 105 (125)
T 3hpk_A 69 EITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNKLQ 105 (125)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4999998 66788888754 45999998743
No 329
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=71.58 E-value=6.4 Score=25.41 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=22.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. .+.++.|+|.|.
T Consensus 78 ~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 113 (117)
T 2byg_A 78 RLLMVNNYSLEEVTHEEAVAILKN-TSEVVYLKVGKP 113 (117)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 4999998 567777775 478999999983
No 330
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=71.22 E-value=12 Score=26.11 Aligned_cols=42 Identities=10% Similarity=0.275 Sum_probs=26.7
Q ss_pred ccceEEEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC-CCeEEEEEEec
Q psy18011 88 NENVWHILDQDN--------DTLKELLKNGIDKELKMAVYSSK-TQDVRTVNITP 133 (163)
Q Consensus 88 ~~~~~~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~-~~~~~~v~v~p 133 (163)
+|. |++||+ .+....++. .+..+.|.|.|.. ++....+.+.+
T Consensus 44 GD~---I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~~~G~~~~~~v~~ 94 (195)
T 2qbw_A 44 GDK---IIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREVGNGAKQEIRVRV 94 (195)
T ss_dssp TCE---EEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCE---EEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEcCCCCCCceeEeEe
Confidence 555 899998 455566665 4568999999832 34444444443
No 331
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=70.94 E-value=6.6 Score=24.69 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=22.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. +++++.|+|.|++
T Consensus 66 ~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 66 RVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKGQ 102 (108)
T ss_dssp EEEEETTEECBSCTTSHHHHHHHH-TTSEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4999998 567777776 5899999999843
No 332
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=70.43 E-value=7 Score=24.33 Aligned_cols=28 Identities=14% Similarity=0.332 Sum_probs=21.0
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++...++ .+++++.|+|.|+
T Consensus 65 ~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 65 KIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVRE 100 (103)
T ss_dssp EEEEETTEECSSCCHHHHHHHHH-HCCSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHhh-cCCCeEEEEEEec
Confidence 3999998 44556666 4689999999984
No 333
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=70.25 E-value=5.9 Score=23.99 Aligned_cols=28 Identities=4% Similarity=0.192 Sum_probs=18.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++.++++..+++.+.+.+.|
T Consensus 50 ~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r 85 (91)
T 1g9o_A 50 RLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP 85 (91)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcC
Confidence 3999998 567778887655555555544
No 334
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=69.95 E-value=5.4 Score=25.04 Aligned_cols=32 Identities=9% Similarity=0.064 Sum_probs=21.7
Q ss_pred EEeeeCc------hHHHHHHHc-cCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN------DTLKELLKN-GIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~------~~l~~~v~~-~~~~~v~l~v~r~~~~ 124 (163)
.|++||+ .++..++.. .+++++.|+|.|++..
T Consensus 61 ~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 61 RVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred EEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 4999998 344443332 4789999999985443
No 335
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=69.67 E-value=7.3 Score=23.92 Aligned_cols=27 Identities=11% Similarity=0.286 Sum_probs=21.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.++++.. +.++.|+|.+
T Consensus 60 ~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~ 94 (96)
T 2ego_A 60 TIASVNGLNVEGIRHREIVDIIKAS-GNVLRLETLY 94 (96)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE
Confidence 3999988 6788888876 4589999876
No 336
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=69.29 E-value=6 Score=25.43 Aligned_cols=29 Identities=10% Similarity=0.166 Sum_probs=22.6
Q ss_pred EeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 94 ILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 94 I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
|++||+ .++.++++..+++.+.+.+.|.+
T Consensus 67 Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 67 VLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKL 103 (119)
T ss_dssp CCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECC
T ss_pred EEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 889988 56777888777787888888843
No 337
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=68.65 E-value=5.5 Score=25.55 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=24.3
Q ss_pred cccceEEEeeeCc--------hHHHHHHHc--cCCCeEEEEEE
Q psy18011 87 ANENVWHILDQDN--------DTLKELLKN--GIDKELKMAVY 119 (163)
Q Consensus 87 ~~~~~~~I~~v~~--------~~l~~~v~~--~~~~~v~l~v~ 119 (163)
++|. |++||+ +++.++++. ..++++.|.|.
T Consensus 59 ~GD~---I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 59 VGRK---IYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTCB---EEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCE---EEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 4566 999998 578888887 47999999985
No 338
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=68.46 E-value=8.1 Score=24.24 Aligned_cols=28 Identities=18% Similarity=0.323 Sum_probs=21.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++..+++. +++++.|+|.|.
T Consensus 65 ~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 100 (107)
T 1uhp_A 65 RIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLRR 100 (107)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEeC
Confidence 4999998 455566665 678899999884
No 339
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=67.88 E-value=7.8 Score=25.36 Aligned_cols=29 Identities=14% Similarity=0.392 Sum_probs=22.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ +++.++++. .+..+.|+|.|.+
T Consensus 89 ~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 89 EVLEVNGIEVSGKSLDQVTDMMIA-NSRNLIITVRPAN 125 (128)
T ss_dssp EEEEETTEESTTCCHHHHHHHHHH-TTTSEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4999998 678888875 4567999999843
No 340
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=66.90 E-value=11 Score=24.39 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=21.9
Q ss_pred EeeeCc---------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 94 ILDQDN---------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 94 I~~v~~---------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
|++||+ .++.++++. .+..+.|+|.|+.
T Consensus 79 Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 115 (128)
T 2db5_A 79 ILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAREP 115 (128)
T ss_dssp EEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEECC
T ss_pred EEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 888887 456677776 6889999999843
No 341
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=65.33 E-value=7.1 Score=24.46 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=21.1
Q ss_pred EEeeeCc--------hHHHHHHHccC---CCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGI---DKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~---~~~v~l~v~r 120 (163)
.|++||+ .++..+++... ++.+.|+|.|
T Consensus 68 ~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 68 QVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 4999998 56677777644 3589999986
No 342
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=65.20 E-value=8.8 Score=23.32 Aligned_cols=28 Identities=11% Similarity=0.268 Sum_probs=20.7
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ +++.++++. .+..+.+.+.|.
T Consensus 52 ~I~~ing~~v~~~~~~~~~~~l~~-~~~~~~~~~~r~ 87 (95)
T 3r68_A 52 LVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDK 87 (95)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEECC
Confidence 4999998 678888887 456677777763
No 343
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=64.81 E-value=8.3 Score=27.13 Aligned_cols=26 Identities=15% Similarity=0.399 Sum_probs=21.8
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.++++. ++++.|+|.|
T Consensus 133 ~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r 166 (192)
T 3k1r_A 133 EIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRH 166 (192)
T ss_dssp EEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEE
Confidence 4999998 667777776 8999999998
No 344
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=64.49 E-value=10 Score=23.87 Aligned_cols=27 Identities=7% Similarity=0.249 Sum_probs=21.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ +++.++++. .++++.|+|.|
T Consensus 68 ~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~~ 102 (109)
T 1q3o_A 68 FLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVM 102 (109)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHH-TTTEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEE
Confidence 3999998 567777876 47889998876
No 345
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=64.23 E-value=8.3 Score=24.63 Aligned_cols=29 Identities=24% Similarity=0.264 Sum_probs=22.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. +++++.|+|.|.+
T Consensus 74 ~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 74 KILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSLS 110 (117)
T ss_dssp EEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCBS
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4999998 456666765 6889999998744
No 346
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.35 E-value=10 Score=24.29 Aligned_cols=27 Identities=19% Similarity=0.325 Sum_probs=21.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEe
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYS 120 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r 120 (163)
.|++||+ .++..+++. .+..+.|+|.|
T Consensus 71 ~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R 105 (120)
T 2eno_A 71 KILSVNGQDLKNLLHQDAVDLFRN-AGYAVSLRVQH 105 (120)
T ss_dssp EEEEETTEECCSCCHHHHHHHHHH-HCSEEEEEEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe
Confidence 4999998 466777775 47889999998
No 347
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=61.10 E-value=12 Score=23.26 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=21.3
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .++.+++++. +..+.|++.|.
T Consensus 59 ~Il~Ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 94 (103)
T 2dc2_A 59 AILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVVYV 94 (103)
T ss_dssp EEEEETTEESTTSCHHHHHHHHHHC-CSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEec
Confidence 4999998 5677777764 45899999874
No 348
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=61.05 E-value=13 Score=22.85 Aligned_cols=28 Identities=21% Similarity=0.274 Sum_probs=19.5
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .+...+++ .+++++.|+|.|.
T Consensus 55 ~I~~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 55 IITKFNGDALEGLPFQVSYALFK-GANGKVSMEVTRP 90 (96)
T ss_dssp EEEEETTEECTTCCHHHHHHHHH-TCSSEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHh-cCCCcEEEEEEeC
Confidence 4999998 23334444 4667899999884
No 349
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=59.15 E-value=17 Score=22.89 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=19.4
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
.|++||+ .+...+++ .+++++.|+|.|.
T Consensus 49 ~Il~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 84 (106)
T 2la8_A 49 IITKFNGDALEGLPFQVCYALFK-GANGKVSMEVTRP 84 (106)
T ss_dssp EEEEESSCBCSSSCHHHHHHHHH-SCBSCEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHh-CCCCeEEEEEEeC
Confidence 4999998 33344444 4667899999884
No 350
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=58.41 E-value=13 Score=24.49 Aligned_cols=28 Identities=7% Similarity=0.228 Sum_probs=22.1
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~ 121 (163)
+|++||+ +++.++++. .++.+.|+|.|.
T Consensus 88 ~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~~ 123 (132)
T 3l4f_D 88 FLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVMV 123 (132)
T ss_dssp EEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEEC
Confidence 3999998 567777776 778999999873
No 351
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=49.20 E-value=20 Score=28.38 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=24.4
Q ss_pred EEeeeCc--------hHHHHHHHc-cCCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKN-GIDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~-~~~~~v~l~v~r~ 121 (163)
.|++||+ +++..+++. .+|+++.|+|.|+
T Consensus 54 ~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 54 QILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeC
Confidence 3999998 677888886 6899999999985
No 352
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=47.78 E-value=4.7 Score=33.94 Aligned_cols=22 Identities=9% Similarity=0.119 Sum_probs=18.6
Q ss_pred cCCccCCeEEEEECCEecCCChH
Q psy18011 10 AGLEAFFDFIVAIDNIRLDQDND 32 (163)
Q Consensus 10 AGL~~~GD~I~~Ing~~v~~~~d 32 (163)
+++.. ||+|++|||+++..|-+
T Consensus 108 s~I~v-GdEIlsING~pv~e~Le 129 (583)
T 3dor_A 108 SEIRV-GDELLEVDGAPVQDVLA 129 (583)
T ss_dssp CSSCT-TCEEEEETTEEHHHHHH
T ss_pred cCCCC-CCEEEEECCccHHHHHH
Confidence 37999 99999999999876543
No 353
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=47.52 E-value=14 Score=27.72 Aligned_cols=29 Identities=31% Similarity=0.339 Sum_probs=23.2
Q ss_pred EEeeeCc--------hHHHHHHHccCCCeEEEEEEeCC
Q psy18011 93 HILDQDN--------DTLKELLKNGIDKELKMAVYSSK 122 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~~~~~v~l~v~r~~ 122 (163)
.|++||+ .++..+++. .++++.|+|.|.+
T Consensus 127 ~Il~VNG~~v~~~t~~e~v~~l~~-~g~~V~L~V~R~~ 163 (263)
T 1z87_A 127 AILSVNGEDLSSATHDEAVQALKK-TGKEVVLEVKYMK 163 (263)
T ss_dssp EEEEESSCBCTTSCHHHHHHHHHH-CCSCCCEEEECCS
T ss_pred EEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEeCc
Confidence 4999998 667788886 4788999999854
No 354
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=36.04 E-value=3.1 Score=24.93 Aligned_cols=17 Identities=12% Similarity=0.434 Sum_probs=11.7
Q ss_pred ecccccc-cccccceeeC
Q psy18011 147 IRFCSFE-GANENVWHIL 163 (163)
Q Consensus 147 ~~~~~~~-~~~~~~~~~~ 163 (163)
+.+|.|+ .||..|||.+
T Consensus 54 L~~~klyDkvP~sVW~~V 71 (72)
T 1jw2_A 54 LTMNKLYDKIPSSVWKFI 71 (72)
T ss_dssp HHSSSCCSCCCHHHHHHC
T ss_pred HHhCchHhhCCHHHhHhc
Confidence 4456666 8888888753
No 355
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=32.90 E-value=18 Score=28.85 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=23.8
Q ss_pred EEeeeCc-----hHHHHHHHccCCCeEEEEEEeCCCC
Q psy18011 93 HILDQDN-----DTLKELLKNGIDKELKMAVYSSKTQ 124 (163)
Q Consensus 93 ~I~~v~~-----~~l~~~v~~~~~~~v~l~v~r~~~~ 124 (163)
+|++||+ .++.++++. ++.++.|++.|++..
T Consensus 113 ~I~~InG~~v~~~~~~~~l~~-~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 113 WIMMMNGDYITKKVESELLQG-STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEETTBCBCTTTGGGGTSC-SCEEEEEEEEEEEC-
T ss_pred EEEEECCEEccchhHHHHhhC-CCCEEEEEEEeCCcc
Confidence 4999998 346667776 899999999996543
No 356
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=31.36 E-value=53 Score=26.76 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=24.1
Q ss_pred EEeeeCc--------hHHHHHHHcc-CCCeEEEEEEeC
Q psy18011 93 HILDQDN--------DTLKELLKNG-IDKELKMAVYSS 121 (163)
Q Consensus 93 ~I~~v~~--------~~l~~~v~~~-~~~~v~l~v~r~ 121 (163)
.|++||+ +++..+|+.. +|.++.|.|.|+
T Consensus 46 ~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~ 83 (468)
T 3shw_A 46 QILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 83 (468)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred EEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 3999998 6788888874 789999999984
No 357
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=27.16 E-value=27 Score=21.16 Aligned_cols=18 Identities=33% Similarity=0.405 Sum_probs=10.9
Q ss_pred CChhhhc-CCccCCeEEEEE
Q psy18011 4 NSPGQKA-GLEAFFDFIVAI 22 (163)
Q Consensus 4 ~SpA~~A-GL~~~GD~I~~I 22 (163)
.-|++++ |+++ ||.|.=+
T Consensus 42 ~DPvar~~G~k~-GdVvkI~ 60 (77)
T 1eik_A 42 TDPVAKAIGAKR-GDIVKII 60 (77)
T ss_dssp TSHHHHGGGCCT-TCEEEEE
T ss_pred cCHhhHHhCCCC-CCEEEEE
Confidence 3455555 8888 8865433
No 358
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=26.99 E-value=14 Score=30.43 Aligned_cols=24 Identities=13% Similarity=0.331 Sum_probs=15.4
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 305 ENm~sg~A-~rP-gDVits~~G~TVE 328 (486)
T 3pei_A 305 ENAVDARS-YRP-GDVLKSMKGITVE 328 (486)
T ss_dssp EC-------CCT-TEEEECTTCCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 56777777 999 9999999998654
No 359
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=25.68 E-value=14 Score=30.47 Aligned_cols=24 Identities=25% Similarity=0.292 Sum_probs=19.4
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|+|...| .+| ||+|++-||+.|.
T Consensus 304 ENm~sg~A-~rP-gDVits~~GkTVE 327 (484)
T 1lam_A 304 ENMPSGKA-NKP-GDVVRARNGKTIQ 327 (484)
T ss_dssp EECCSTTS-CCT-TEEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 46677776 899 9999999998653
No 360
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=25.24 E-value=13 Score=30.64 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=19.5
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 324 ENm~sg~A-~rP-gDVits~~GkTVE 347 (503)
T 1gyt_A 324 ENMPGGRA-YRP-GDVLTTMSGQTVE 347 (503)
T ss_dssp EECCSTTC-CCT-TCEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 46677776 899 9999999998764
No 361
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=24.21 E-value=14 Score=30.26 Aligned_cols=24 Identities=13% Similarity=0.264 Sum_probs=19.4
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 304 ENm~sg~A-~rP-gDVits~~GkTVE 327 (482)
T 3ij3_A 304 ENAIGSRS-YRP-GDVVQTRARKTIE 327 (482)
T ss_dssp EECCSTTC-CCT-TCEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCCEEE
Confidence 46666666 899 9999999998754
No 362
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=24.11 E-value=17 Score=30.08 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=18.6
Q ss_pred CCChhhhcCCccCCeEEEEECCEec
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRL 27 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v 27 (163)
+|.|...| .+| ||+|++-||+.|
T Consensus 344 ENm~sg~A-~rP-gDVits~~GkTV 366 (522)
T 4efd_A 344 ENAIGPKS-YRN-DDIIVMKSGKTV 366 (522)
T ss_dssp ECCC-CCS-TTT-TEEEECTTSCEE
T ss_pred ccCCCCCC-CCC-CCEEEecCCcEE
Confidence 46777776 899 999999999865
No 363
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=23.90 E-value=29 Score=21.07 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=10.2
Q ss_pred Chhhhc-CCccCCeEEEEE
Q psy18011 5 SPGQKA-GLEAFFDFIVAI 22 (163)
Q Consensus 5 SpA~~A-GL~~~GD~I~~I 22 (163)
-|++++ |+++ ||.|.=+
T Consensus 41 DPvar~~G~k~-GdVvkI~ 58 (78)
T 1hmj_A 41 DPVIQEIGAKE-GDVVRVI 58 (78)
T ss_pred CHhhHHhCCCC-CCEEEEE
Confidence 344444 8888 8865443
No 364
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=23.86 E-value=15 Score=30.25 Aligned_cols=24 Identities=17% Similarity=0.318 Sum_probs=19.5
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|+|...| .+| ||+|++-||+.|.
T Consensus 321 ENm~~g~A-~rP-gDVit~~~G~TVE 344 (497)
T 3h8g_F 321 ENMPSGGA-TRP-GDIVTTMSGQTVE 344 (497)
T ss_dssp EECCSTTS-CCT-TEEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 46677766 899 9999999998654
No 365
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=23.63 E-value=15 Score=30.25 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=19.4
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 316 ENm~sg~A-~rP-gDVit~~~G~TVE 339 (490)
T 3jru_B 316 ENAIDGNA-YRP-SDVITSMSGKTIE 339 (490)
T ss_dssp EECCSTTC-CCT-TCEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEecCCcEEE
Confidence 46677766 899 9999999998653
No 366
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=23.08 E-value=11 Score=22.39 Aligned_cols=14 Identities=21% Similarity=0.498 Sum_probs=1.9
Q ss_pred cccc---cccccceeeC
Q psy18011 150 CSFE---GANENVWHIL 163 (163)
Q Consensus 150 ~~~~---~~~~~~~~~~ 163 (163)
|.|+ ++|..|||.+
T Consensus 54 gkLyD~~kVP~~VW~yV 70 (71)
T 2jqt_A 54 GRLFDLGQVPKSVWHYV 70 (71)
T ss_dssp CCCC-------------
T ss_pred CcccccccCCHHHhhhc
Confidence 4444 6888888753
No 367
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=22.27 E-value=27 Score=19.10 Aligned_cols=13 Identities=23% Similarity=0.217 Sum_probs=6.8
Q ss_pred hhhhcCCccCCeEE
Q psy18011 6 PGQKAGLEAFFDFI 19 (163)
Q Consensus 6 pA~~AGL~~~GD~I 19 (163)
..++.||++ ||.+
T Consensus 20 ir~~lgi~~-Gd~v 32 (53)
T 2l66_A 20 VRQKFQIKE-GDLV 32 (53)
T ss_dssp HHHHSCCCT-TCEE
T ss_pred HHHHcCcCC-CCEE
Confidence 344555555 5554
No 368
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=22.22 E-value=16 Score=30.19 Aligned_cols=24 Identities=13% Similarity=0.260 Sum_probs=19.3
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 337 ENm~sg~A-~rP-gDVits~~GkTVE 360 (515)
T 3kzw_A 337 ENMINEAS-MKP-DDVFTALSGETVE 360 (515)
T ss_dssp EECCCTTC-CCT-TCEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCCEEE
Confidence 46666666 899 9999999998653
No 369
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=21.32 E-value=21 Score=29.45 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=19.5
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|+|...| .+| ||+|++-||+.|.
T Consensus 306 ENm~sg~A-~rP-gDVits~~GkTVE 329 (491)
T 2hc9_A 306 ENNVSPIA-NKP-DDIIKMLSGKTVE 329 (491)
T ss_dssp EECCSTTS-CCT-TCEEECTTSCEEE
T ss_pred ecCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 46677766 899 9999999998763
No 370
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=20.94 E-value=91 Score=22.71 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=33.2
Q ss_pred hhhcCCccCCeEEEEECCEecCCC----hHHHHHHHHhCCCCeEEEEEEEC
Q psy18011 7 GQKAGLEAFFDFIVAIDNIRLDQD----NDTLKELLKNGIDKELKMAVYSS 53 (163)
Q Consensus 7 A~~AGL~~~GD~I~~Ing~~v~~~----~d~~~~~l~~~~~~~v~l~v~r~ 53 (163)
+++-|+.. |...+++||.++.-- ......++....+.++-+...+.
T Consensus 52 ~~~d~~~~-~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~~ 101 (219)
T 2j3t_D 52 GQRDGIRV-GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRP 101 (219)
T ss_dssp CCCTTCCT-TCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEECC
T ss_pred cccCCccc-cceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecCC
Confidence 67889999 999999999998742 12355666555667777776653
No 371
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=20.54 E-value=19 Score=29.90 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=19.1
Q ss_pred CCChhhhcCCccCCeEEEEECCEecC
Q psy18011 3 DNSPGQKAGLEAFFDFIVAIDNIRLD 28 (163)
Q Consensus 3 ~~SpA~~AGL~~~GD~I~~Ing~~v~ 28 (163)
+|.|...| .+| ||+|++-||+.|.
T Consensus 348 ENm~sg~A-~rP-gDVit~~~GkTVE 371 (528)
T 3kr4_A 348 ENMVSKNS-YRP-GDIITASNGKTIE 371 (528)
T ss_dssp EECCSTTS-CCT-TCEEECTTSCEEE
T ss_pred ccCCCCCC-CCC-CCEEEeCCCcEEE
Confidence 45666666 899 9999999998753
Done!