BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18014
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8I0G5|COPG_DROME Coatomer subunit gamma OS=Drosophila melanogaster GN=gammaCop PE=2
SV=1
Length = 883
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/303 (76%), Positives = 267/303 (88%), Gaps = 2/303 (0%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
N +QNL+KT+VLQE RTFN+TPVNP+KC HILTKILYLINQGEQL +EATD FFAMTKL
Sbjct: 22 NAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKL 81
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQSKDV+LRRMVYLGIKELS+IAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD TM
Sbjct: 82 FQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTM 141
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QA+ERYMKQ IVD+N+AVS AA+VS + + D+VKRW NE QEALNS+N+MVQYHA
Sbjct: 142 LQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYHA 201
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYHIRKSD+LAV+KLV KLT+ ++KSPYA CMLIRI CKLIE+++ S + S+SP
Sbjct: 202 LGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIACKLIEEEDIPSEE--LSDSP 259
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LF ++E+CLRHKSE V+YEAAHAIVNL+ T+ R L+PA S+LQLFCSSPK LRFAAVRT
Sbjct: 260 LFTFIESCLRHKSEMVIYEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPKATLRFAAVRT 319
Query: 321 LNK 323
LNK
Sbjct: 320 LNK 322
>sp|Q29AE5|COPG_DROPS Coatomer subunit gamma OS=Drosophila pseudoobscura pseudoobscura
GN=gammaCop PE=3 SV=1
Length = 878
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/303 (75%), Positives = 265/303 (87%), Gaps = 2/303 (0%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
N +QNL+KT+VLQE RTFN+TPVN +KC HILTKILYLINQGE L +EATD FFAMTKL
Sbjct: 17 NAYQNLEKTSVLQETRTFNETPVNARKCIHILTKILYLINQGETLVPREATDCFFAMTKL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQSKDV+LRRMVYLGIKELS++AEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD TM
Sbjct: 77 FQSKDVVLRRMVYLGIKELSSVAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDHTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QA+ERYMKQ IVD+N+AVS AA+VS + + D+VKRW NE QEA+NS+N+MVQYHA
Sbjct: 137 LQAVERYMKQCIVDKNAAVSCAALVSSLRLATTAGDVVKRWANEAQEAMNSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYHIRKSD+LAV+KLV KLT+ ++KSPYA CMLIRI CKLIE+++ S + S+SP
Sbjct: 197 LGLLYHIRKSDRLAVSKLVNKLTRSSLKSPYAVCMLIRIACKLIEEEDIPSEE--LSDSP 254
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LF ++ETCLRHKSE V+YEAAHAIVNL+ T+ R L+PA S+LQLFCSSPK LRFAAVRT
Sbjct: 255 LFTFIETCLRHKSEMVIYEAAHAIVNLKNTNHRMLSPAFSILQLFCSSPKATLRFAAVRT 314
Query: 321 LNK 323
LNK
Sbjct: 315 LNK 317
>sp|Q7PVF6|COPG_ANOGA Coatomer subunit gamma OS=Anopheles gambiae GN=gammaCop PE=3 SV=2
Length = 868
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/304 (73%), Positives = 266/304 (87%), Gaps = 2/304 (0%)
Query: 20 GNPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTK 79
GNP+QNL+KT+VLQE R FN+TPVN +KCTHILTKILYL+NQGE LGT+EAT+ FFAMTK
Sbjct: 16 GNPWQNLEKTSVLQETRMFNETPVNARKCTHILTKILYLLNQGEVLGTREATECFFAMTK 75
Query: 80 LFQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTT 139
LFQSKDV++RRMVYLGIKELS IA+DVIIVTSSLTKDMTGKEDLYRA AIRALCSITD+T
Sbjct: 76 LFQSKDVVMRRMVYLGIKELSPIADDVIIVTSSLTKDMTGKEDLYRAPAIRALCSITDST 135
Query: 140 MIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYH 199
M+QA+ERYMKQ IVDRN+ VSS A+VS H+ + ++VKRW NE QEALNS+N+MVQYH
Sbjct: 136 MLQAVERYMKQCIVDRNAPVSSGALVSSLHLASTAGEVVKRWANEAQEALNSDNIMVQYH 195
Query: 200 ALGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNS 259
LGLLYHIRK+D+LAVTKLV KLT+ ++SPYATC LIRI CK++E+++A+ T +S
Sbjct: 196 GLGLLYHIRKADRLAVTKLVNKLTRQHLRSPYATCFLIRIACKIMEEEDASGNAT--EDS 253
Query: 260 PLFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVR 319
PLF+++E CLR+KSE VVYEAAHA+VNL+RT+ REL+ AVS+LQLFC S K LRFAAVR
Sbjct: 254 PLFNFVECCLRNKSEMVVYEAAHAVVNLKRTNPRELSTAVSILQLFCGSSKATLRFAAVR 313
Query: 320 TLNK 323
T+NK
Sbjct: 314 TMNK 317
>sp|Q9I8E6|COPG2_TAKRU Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1
Length = 873
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 257/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQNL+K+AVLQEAR FN+TP+NP++C HILTKI+YL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQNLEKSAVLQEARIFNETPINPRRCLHILTKIIYLLNQGEHFGTTEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++NI+EDVIIVTSSLTKDMTGKED+YR AIRALC ITDTTM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDTTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ +VSS+A+VS HM K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVPSVSSSALVSSLHMVKMSYDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAVTK++ K TK +KSP+A CMLIRI KL+++ A +SP
Sbjct: 197 LGLLYHLRKNDRLAVTKMLNKFTKSGLKSPFAYCMLIRIASKLLDETEAG------HDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K+E VVYEAA AIV++ +ARELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKNEMVVYEAASAIVHMPNCTARELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q9PUE4|COPG2_DANRE Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 PE=2 SV=2
Length = 873
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 255/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP++C HILTKI+YL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQHLEKSAVLQEARIFNETPINPRRCLHILTKIIYLLNQGEHFGTTEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++NI+EDVIIVTSSLTKDMTGKED+YR AIRALC ITDTTM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDTTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ +VSS+A+VS HM K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVPSVSSSALVSSLHMVKMSFDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAVTK++ K TK +KSP+A CM+IRI KL+E+ +SP
Sbjct: 197 LGLLYHLRKNDRLAVTKMLNKFTKSGLKSPFAYCMMIRIASKLLEETEGG------HDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E VVYEAA AIV++ +ARELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVVYEAASAIVHMPNCTARELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q66JI9|COPG2_XENTR Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1
Length = 872
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 256/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP++C HILTKILYL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQHLEKSAVLQEARLFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++NI+EDVIIVTSSLTKDMTGKED+YR AIRALC ITD TM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDATM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+Q IERYMKQAIVD+ S+VSS+A+VS HMTK S D+VKRW+NE QEA +S+N+MVQYHA
Sbjct: 137 LQGIERYMKQAIVDKVSSVSSSALVSSLHMTKISYDVVKRWINEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLY++RK+D+LAV+K++ K TK +KSP+A CMLIRI +L+E+ NSP
Sbjct: 197 LGLLYNLRKNDRLAVSKMLNKFTKSGLKSPFAYCMLIRIASRLLEESEEG------HNSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E V+YEAA AI++L +ARELAPAVSVLQLFCSSPKP LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|P53620|COPG1_BOVIN Coatomer subunit gamma-1 OS=Bos taurus GN=COPG1 PE=1 SV=1
Length = 874
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 257/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP+KC HILTKILYLINQGE LGT EAT+AFFAMTKL
Sbjct: 17 NPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE+S IAEDVIIVTSSLTKDMTGKED YR A+RALC ITD+TM
Sbjct: 77 FQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDSYRGPAVRALCQITDSTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ +VSS+A+VS H+ K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAV+K+++K T+ +KSP+A CM+IR+ + +ED++ + +SP
Sbjct: 197 LGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASRQLEDEDGS------RDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E VVYEAA AIVNL SA+ELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q9Y678|COPG1_HUMAN Coatomer subunit gamma-1 OS=Homo sapiens GN=COPG1 PE=1 SV=1
Length = 874
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 257/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP+KC HILTKILYLINQGE LGT EAT+AFFAMTKL
Sbjct: 17 NPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE+S IAEDVIIVTSSLTKDMTGKED YR A+RALC ITD+TM
Sbjct: 77 FQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ +VSS+A+VS H+ K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAV K+++K+T+ +KSP+A CM+IR+ K +E+++ + +SP
Sbjct: 197 LGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGS------RDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E VVYEAA AIVNL SA+ELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q9QZE5|COPG1_MOUSE Coatomer subunit gamma-1 OS=Mus musculus GN=Copg1 PE=2 SV=1
Length = 874
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 256/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NP Q+L+K+AVLQEAR FN+TP+NP+KC HILTKILYLINQGE LGT EAT+AFFAMTKL
Sbjct: 17 NPLQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE+S IAEDVIIVTSSLTKDMTGKED YR A+RALC ITD+TM
Sbjct: 77 FQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QA+ERYMKQAIVD+ +VSS+A+VS H+ K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAV+K+++K T+ +KSP+A CM+IR+ K +E+++ + +SP
Sbjct: 197 LGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASKQLEEEDGS------RDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E VVYEAA AIVNL SA+ELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q4AEF8|COPG1_RAT Coatomer subunit gamma-1 OS=Rattus norvegicus GN=Copg1 PE=2 SV=1
Length = 874
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 256/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NP Q+L+K+AVLQEAR FN+TP+NP+KC HILTKILYLINQGE LGT EAT+AFFAMTKL
Sbjct: 17 NPLQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE+S IAEDVIIVTSSLTKDMTGKED YR A+RALC ITD+TM
Sbjct: 77 FQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QA+ERYMKQAIVD+ +VSS+A+VS H+ K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLYH+RK+D+LAV+K+++K T+ +KSP+A CM+IR+ K +E+++ + +SP
Sbjct: 197 LGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASKQLEEEDGS------RDSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E VVYEAA AIVNL SA+ELAPAVSVLQLFCSSPK LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q6DKD7|COPG2_XENLA Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1
Length = 872
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 255/303 (84%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP++C HILTKILYL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQHLEKSAVLQEARLFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++NI+EDVIIVTSSLTKDMTGKED+YR AIRALC ITD TM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDATM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+Q IERYMKQAIVD+ +VSS+A+VS +MTK S D+VKRW+NE QEA +S+N+MVQYHA
Sbjct: 137 LQGIERYMKQAIVDKIPSVSSSALVSSLNMTKISYDVVKRWINEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LGLLY+++K+D+LAV+K++ K TK +KSP+A CMLIRI +L+E+ NSP
Sbjct: 197 LGLLYNLKKNDRLAVSKMLNKYTKSGVKSPFAYCMLIRIASRLLEESEEG------HNSP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E V+YEAA AI++L +ARELAPAVSVLQLFCSSPKP LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q9UBF2|COPG2_HUMAN Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1
Length = 871
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 254/303 (83%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP++C HILTKILYL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++ I+EDVIIVTSSLTKDMTGKED+YR AIRALC ITD TM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ S+VSS+A+VS HM K S D+VKRW+NE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LG+LYH+RK+D+LAV+K++ K TK +KS +A CMLIRI +L+++ + SP
Sbjct: 197 LGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKETE------DGHESP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E V+YEAA AI++L +ARELAPAVSVLQLFCSSPKP LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q9QXK3|COPG2_MOUSE Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1
Length = 871
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/303 (67%), Positives = 254/303 (83%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPFQ+L+K+AVLQEAR FN+TP+NP++C HILTKILYL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++ I+EDVIIVTSSLTKDMTGKED+YR AIRALC ITD TM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QA+ERYMKQAIVD+ S+V+S+A+VS HM K S D+VKRW+NE QEA +S+N+MVQYHA
Sbjct: 137 LQAVERYMKQAIVDKVSSVASSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LG+LYH+RK+D+LAV+K++ K TK +KS +A CMLIRI +L+++ + SP
Sbjct: 197 LGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKESE------DGHESP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
LFD++E+CLR+K E V+YEAA AI++L +ARELAPAVSVLQLFCSSPKP LR+AAVRT
Sbjct: 251 LFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|A2VE21|COPG2_BOVIN Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1
Length = 871
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/303 (67%), Positives = 253/303 (83%), Gaps = 6/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
NPF++L+K+AVLQEAR FN+TP+NP++C HILTKILYL+NQGE GT EAT+AFFAMT+L
Sbjct: 17 NPFRHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRL 76
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQS D LRRM YL IKE++ I+EDVIIVTSSLTKDMTGKED+YR AIRALC ITD TM
Sbjct: 77 FQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTM 136
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+QAIERYMKQAIVD+ S+VSS+A+VS HM K S D+VKRWVNE QEA +S+N+MVQYHA
Sbjct: 137 LQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWVNEAQEAASSDNIMVQYHA 196
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
LG+LYH++K+D+LAV+K++ K TK +KS +A CMLIRI +L+++ SP
Sbjct: 197 LGVLYHLKKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKENEEG------HESP 250
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
+FD++E+CLR+K E V+YEAA AI++L +ARELAPAVSVLQLFCSSPKP LR+AAVRT
Sbjct: 251 VFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRT 310
Query: 321 LNK 323
LNK
Sbjct: 311 LNK 313
>sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorhabditis elegans
GN=T14G10.5 PE=2 SV=1
Length = 870
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 244/304 (80%), Gaps = 7/304 (2%)
Query: 20 GNPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTK 79
GN + +LDKT+VLQEAR FN+TP+N +KC IL+K++Y+I QGE +G EAT+AFF +TK
Sbjct: 12 GNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTK 71
Query: 80 LFQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTT 139
L+QSKDV LRRMVYL +KEL+ +++DVIIVTSSLTKDMTG+EDLYRAAAIRALC ITDT
Sbjct: 72 LWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTG 131
Query: 140 MIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYH 199
M+Q IERYMKQAIVDRNSA+SS+A+VS H+ + S ++V+RW NEVQEA++S+N MVQYH
Sbjct: 132 MLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYH 191
Query: 200 ALGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNS 259
AL LLY IR +D+LAV KLV K +K ++SPYA C LIRI + + D + +S
Sbjct: 192 ALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIATRCLVDD-------DQPDS 244
Query: 260 PLFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVR 319
+F ++E+CLRHKSE VVYEAA AIV+L +T+ E+ PA++ LQ+ C+SPK +RFAAVR
Sbjct: 245 SVFTFIESCLRHKSEMVVYEAARAIVSLPQTTPSEIQPAITALQMCCTSPKAAVRFAAVR 304
Query: 320 TLNK 323
TLNK
Sbjct: 305 TLNK 308
>sp|Q0WW26|COPG_ARATH Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1
SV=2
Length = 886
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 232/305 (76%), Gaps = 7/305 (2%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
+PF ++K AVLQEAR FND V+P++C+ ++TK+LYL+NQGE EAT+ FF++TKL
Sbjct: 19 SPFMGIEKGAVLQEARVFNDPQVDPRRCSQVITKLLYLLNQGESFTKVEATEVFFSVTKL 78
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQSKD LRRMVYL IKELS +++VIIVTSSL KDM K D+YRA AIR LC I D T+
Sbjct: 79 FQSKDTGLRRMVYLIIKELSPSSDEVIIVTSSLMKDMNSKIDMYRANAIRVLCRIIDGTL 138
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+ IERY+KQAIVD+N VSSAA+VS H+ K +P++VKRW NEVQE + S + +VQ+HA
Sbjct: 139 LTQIERYLKQAIVDKNPVVSSAALVSGLHLLKTNPEIVKRWSNEVQEGIQSRSALVQFHA 198
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIED--QNAASGDTNWSN 258
L LL+ IR++D+LAV+KLV LT+ +++SP A C+LIR ++I D + SG+
Sbjct: 199 LALLHQIRQNDRLAVSKLVGSLTRGSVRSPLAQCLLIRYTSQVIRDMANHGQSGE----- 253
Query: 259 SPLFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAV 318
P +++LE+CLRHK+E V+ EAA AI L ++REL PA++VLQLF SSP+PVLRFAAV
Sbjct: 254 RPFYEFLESCLRHKAEMVILEAARAITELDGVTSRELTPAITVLQLFLSSPRPVLRFAAV 313
Query: 319 RTLNK 323
RTLNK
Sbjct: 314 RTLNK 318
>sp|Q8H852|COPG1_ORYSJ Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica
GN=Os03g0227000 PE=2 SV=2
Length = 884
Score = 357 bits (917), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 232/303 (76%), Gaps = 4/303 (1%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
+PF ++K AVLQEAR F+D ++ +KC+ ++TK+LYL+NQGE EAT+ FFA+TKL
Sbjct: 18 SPFYGIEKGAVLQEARAFHDPQLDARKCSQVITKLLYLLNQGETFTKVEATEVFFAVTKL 77
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQSKD LRR+VYL IKELS +++VIIVTSSL KDM K D+YRA AIR LC I D T+
Sbjct: 78 FQSKDAGLRRLVYLMIKELSPSSDEVIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDGTL 137
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+ IERY+KQAIVD+N V+SAA+VS H+ + +P++VKRW NEVQEA+ S +VQ+H
Sbjct: 138 LTQIERYLKQAIVDKNPVVASAALVSGIHLLQANPEIVKRWSNEVQEAVQSRFALVQFHG 197
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
L LL+ IR++D+LA++K+V+ LT+ +++SP A C+LIR ++I + +S +T S+ P
Sbjct: 198 LALLHQIRQNDRLAISKMVSGLTRGSVRSPLAQCLLIRYTSQVIRE---SSMNTQTSDRP 254
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
FDYLE+CLRHKSE V+ EAA I + TS RELAPA++VLQLF SS KPVLRFAAVRT
Sbjct: 255 FFDYLESCLRHKSEMVILEAARKIAEMDVTS-RELAPAITVLQLFLSSSKPVLRFAAVRT 313
Query: 321 LNK 323
LNK
Sbjct: 314 LNK 316
>sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica
GN=Os07g0201100 PE=2 SV=1
Length = 889
Score = 353 bits (907), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 172/303 (56%), Positives = 230/303 (75%), Gaps = 3/303 (0%)
Query: 21 NPFQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKL 80
+PF ++K AVLQEAR F+D ++ ++C ++TK+LYL+NQG+ EAT+ FFA TKL
Sbjct: 20 SPFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKL 79
Query: 81 FQSKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTM 140
FQSKD LRRMVYL IKELS A++VIIVTSSL KDM K D+YRA AIR LC I D+T+
Sbjct: 80 FQSKDAGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDSTL 139
Query: 141 IQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHA 200
+ IERY+KQAIVD+N V+SAA+VS ++ + SP++VKRW NEVQEA+ S +VQ+HA
Sbjct: 140 LTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVVKRWSNEVQEAVQSRAALVQFHA 199
Query: 201 LGLLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSP 260
L LL+ IR++D+LAV+KLV LT+ +++SP A C+LIR ++I + +S ++ + P
Sbjct: 200 LALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTSQVIRE---SSMNSQGGDRP 256
Query: 261 LFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRT 320
FD+LE+CLR+K+E V+ EAA AI L ++REL PA++VLQLF SS KPVLRFAAVRT
Sbjct: 257 FFDFLESCLRNKAEMVILEAARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRT 316
Query: 321 LNK 323
LNK
Sbjct: 317 LNK 319
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/301 (53%), Positives = 224/301 (74%), Gaps = 7/301 (2%)
Query: 23 FQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKLFQ 82
F+NLDK V+QE R FN++P++P+KC+ ++++ LYL+++G+ EATD FFA TKLFQ
Sbjct: 17 FENLDKGQVIQEKRAFNESPIHPRKCSLVISQFLYLLSRGDSFTKTEATDIFFAATKLFQ 76
Query: 83 SKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQ 142
SKD+ LRR++YL +KELS I++D IIV SSLTKDM+ K +LYRA AIR LC ITD++++
Sbjct: 77 SKDIPLRRLMYLLLKELSTISQDAIIVISSLTKDMSHKIELYRANAIRILCKITDSSILP 136
Query: 143 AIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHALG 202
IERY KQ+IV+++ VSSAA+VS H+ K P++VKRW NEVQEA+++++ MVQYHAL
Sbjct: 137 QIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIVKRWANEVQEAISNKSNMVQYHALA 196
Query: 203 LLYHIRKSDQLAVTKLVAKLTKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSPLF 262
LL+ I++ D+LAV+KLV+ L K +++SPYA LIR ++IE +TN +
Sbjct: 197 LLHRIKQHDRLAVSKLVSNLIKNSLRSPYAQSYLIRCCVEVIE-------ETNTEDRIFR 249
Query: 263 DYLETCLRHKSETVVYEAAHAIVNLRRTSARELAPAVSVLQLFCSSPKPVLRFAAVRTLN 322
+Y+E+CLR K+E V YEAA +I + S +E+ AV VLQ F +S KP LRFAAVRTLN
Sbjct: 250 EYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNFLNSTKPTLRFAAVRTLN 309
Query: 323 K 323
K
Sbjct: 310 K 310
>sp|P87140|COPG_SCHPO Probable coatomer subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec21 PE=1 SV=1
Length = 905
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 195/326 (59%), Gaps = 32/326 (9%)
Query: 23 FQNLDKTAVLQEARTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKLFQ 82
F N+++ V Q+AR FN + ++P+K +L+KI YLI GE ++AT+ FF +TKLFQ
Sbjct: 15 FANVNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQEKQATELFFGITKLFQ 74
Query: 83 SKDVILRRMVYLGIKELSNIAEDVIIVTSSLTKDM-TGKEDLYRAAAIRALCSITDTTMI 141
KD LR+ VY+ IKELS +AEDVI++TSS+ KD TG+E +YR AIR+L + D +
Sbjct: 75 HKDPSLRQFVYIIIKELSVVAEDVIMITSSIMKDTATGRETIYRPNAIRSLIRVIDANTV 134
Query: 142 QAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENV------- 194
AIER + IVD SAV+SAA+VS +H+ + D+V RW NEVQ+A+ S NV
Sbjct: 135 PAIERILTTGIVDPISAVASAALVSAYHLYPVAKDIVSRWNNEVQDAVTSHNVGRKVASS 194
Query: 195 ---------------MVQYHALGLLYHIRKSDQLAVTKLVAKLTK--FTMKSPYATCMLI 237
+ QYHALGLLY IR+ D +A+ KL+ L T+ + +A MLI
Sbjct: 195 PFFTSTLGYTPNASGISQYHALGLLYRIRRHDSIAMNKLLQLLVSNLGTVSNSHAFVMLI 254
Query: 238 RIVCKLIEDQNAASGDTNWSNSPLFDYLETCLRHKSETVVYEAAHAIVNLRRTSARELAP 297
R + L+ DQN D + +L L+ K + V E A +V L+ S +L P
Sbjct: 255 RYISSLM-DQNTQFRDQ------MVPFLHGWLKSKGDMVNLEVARNMVRLKNISDDDLQP 307
Query: 298 AVSVLQLFCSSPKPVLRFAAVRTLNK 323
VSVL++F SS + RF+A+RTLN+
Sbjct: 308 VVSVLKIFLSSHRSATRFSAIRTLNE 333
>sp|P32074|COPG_YEAST Coatomer subunit gamma OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC21 PE=1 SV=2
Length = 935
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 186/324 (57%), Gaps = 38/324 (11%)
Query: 27 DKTAVLQEA-RTFNDTPVNPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKD 85
DK + Q+ TFN++PVN K+C +++++L L+ QGE EAT FF+++KLFQ ++
Sbjct: 19 DKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQN 78
Query: 86 VILRRMVYLGIKELSNIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIE 145
LR+ VYL IKELS I+EDV++ TSS+ KD+ DL + AIR+L + D + + E
Sbjct: 79 DPLRQAVYLAIKELSGISEDVLMATSSIMKDVQNGSDLIKPDAIRSLTYVLDESTAFSAE 138
Query: 146 RYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEAL-----------NSE-- 192
R +K A+V R+ ++SSAA+ + +H+ S ++R+ NE QEA+ NSE
Sbjct: 139 RLLKSAVVSRHPSISSAALCTSYHLLPISEVTIRRFTNETQEAVLDLKQFPNQHGNSEYY 198
Query: 193 ---NVMVQYHALGLLYHIRKSDQLAVTKLVAKLTK-FTMKSPYATCMLIRIVCKLIEDQN 248
+ QYHALGLLY ++K+D++A+ KLV ++ +MK+ A L++IV LI
Sbjct: 199 PNSTYISQYHALGLLYQLKKTDKMALLKLVRHFSENNSMKNQLAKVELVKIVNDLI---- 254
Query: 249 AASGDTNWSNSPLFD----YLETCLRHKSETVVYEAAHAIVNLRRTSARELAP-----AV 299
+ + LF L L +K E+V E A I + ++R +AP A+
Sbjct: 255 -------YRDPQLFSQFRPLLSDWLSNKFESVQLETAKLITSFATRNSRLVAPELYAAAI 307
Query: 300 SVLQLFCSSPKPVLRFAAVRTLNK 323
S LQ + P+ RFAA+R LN+
Sbjct: 308 SALQSLLTVPRVSSRFAALRILNR 331
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 44 NPKKCTHILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIA 103
N K IL +I+Y + G + + F + + S D+I++++VYL I S
Sbjct: 39 NADKIKDILQRIIYYMTIG-----MDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSN 93
Query: 104 EDVII-VTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSA 162
D+++ V ++L +D + + R A+R+LCS+ ++ + +++ D + V
Sbjct: 94 PDLLLLVVNTLRRDCIDRNPIIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKT 153
Query: 163 AVVS---IFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHALGLLYHIRKSDQLAVTKLV 219
A++ ++H++K + DL + ++ + + ++ V +A+ L I+ +
Sbjct: 154 ALLGLAKLYHLSKEAFDL-DIIIPKIFDMIMDQDPQVIVNAVSTLNEIKPGWSFTFDLVQ 212
Query: 220 AKLTKFTMKSPYATCMLIRIVCK 242
+ KF + ++ C+++ + +
Sbjct: 213 HLMIKFKEFNEWSQCIILECLSR 235
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 46 KKCTHILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAED 105
+K + +++Y+ E LG +A+ + K+ +++L+R YL + N D
Sbjct: 64 RKMKEYIIRLVYI----EMLG-HDASFGYIYAVKMTHDDNLLLKRTGYLAVTLFLNEDHD 118
Query: 106 VII-VTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
+II + +++ KD+ L AA+ A+C + + I A+ + + + + AV A+
Sbjct: 119 LIILIVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAI 178
Query: 165 VSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHALGLLYHIRKSD----QLAVTKLVA 220
+++ + SP V V+ ++ L + V L L+ + D + V+ V+
Sbjct: 179 MALHRFHRKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLISEDVNSYKDLVSSFVS 238
Query: 221 KLTKFT------------MKSPYATCMLIRIVCKLIEDQNAASGDTNWSN 258
L + T M +P+ L++I+ L SGD N S+
Sbjct: 239 ILKQVTERRLPKSYDYHQMPAPFIQIKLLKIMALL------GSGDKNASD 282
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 69 EATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRAA 127
+ +D F M K + D++ +++VYL + + + D+ ++ ++L KD + + R
Sbjct: 45 DMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 104
Query: 128 AIRALCSITDTTMIQAIERYMKQAIV----DRNSAVSSAAVVSI--FHMTKHSPDLVKRW 181
A+R++CS+ + ++ Y++Q +V D+ S V AV+ H ++
Sbjct: 105 ALRSMCSLR----MPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGAL 160
Query: 182 VNEVQEALNSENVMVQYHALGLLYHIRKSD 211
VNE+ L ++ +V + L L I K +
Sbjct: 161 VNELYSLLRDQDPIVVVNCLRSLEEILKQE 190
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 69 EATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT-SSLTKDMTGKEDLYRAA 127
+ + F M + D++L++M YL + + D+ ++T + L +D ++ + R
Sbjct: 60 DVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDPMIRGL 119
Query: 128 AIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSP 175
A+R+LCS+ +++ + + + D NS V + AV + + SP
Sbjct: 120 ALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISP 167
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 50 HILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-II 108
+++ +++ + QG + + F M K + D++ +++VYL + + + D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDM-----SGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 109 VTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIV----DRNSAVSSAAV 164
++L KD + + R A+R++CS+ + ++ Y++Q I+ D+ S V AV
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLR----MPGVQEYIQQPILNGLRDKASYVRRVAV 141
Query: 165 VSI--FHMTKHSPDLVKRWVNEVQEALNSENVMVQYHALGLLYHIRKSD 211
+ H ++ VNE+ L ++ +V + L L I K +
Sbjct: 142 LGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE 190
>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium discoideum GN=copb PE=2 SV=2
Length = 912
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 55 ILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRM--VYLGIKE---LSNIAEDVIIV 109
ILY IN GE + + M S D ++++ +Y + E L + ++I+V
Sbjct: 51 ILYTIN-GEPIPQLLMPIILYVMP----SNDHTIKKLLLIYWEVIEKTHLGKLKSEMILV 105
Query: 110 TSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFH 169
+SL D+ + R + +R LC + + +++ + ++ + +R++ AV++I++
Sbjct: 106 CNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYN 165
Query: 170 MTKH-------SPDLVKRWVNEVQEALNSENVMVQYHALGLLYHIRKSDQLAVTKLVAKL 222
+ H +P+L+ ++ L ++ + +A +L++ A K V L
Sbjct: 166 IYSHFDYLIPDAPELIYNFL------LQEKDASCKRNAFIMLFN------CAPEKAVEYL 213
Query: 223 TKFTMKSPYATCMLIRIVCKLIEDQNAASGDTNWSNSPLFDYLETCLRHKSETVVYEAAH 282
+ + P ML IV +LI S S + T L S V YE+A
Sbjct: 214 SSVLDEVPSFGDMLQFIVVELIRKVCKTSPS---ERSKYIKCIFTLLNSSSPAVKYESAG 270
Query: 283 AIVNLRRTSARELAPAVSVLQLFCS 307
+++L A + + L C+
Sbjct: 271 TLLSLSSAPTAVRGAASAYIDLLCN 295
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 89 RRMVYLGIKELSNIAEDVI-IVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERY 147
+R+ YLGI L + +V+ +VT+ L DM A+ +I M + +
Sbjct: 84 KRLGYLGIMLLLDENTEVLTLVTNGLKNDMEHSNMYVCGLALCTFANIASEEMSRDLCNE 143
Query: 148 MKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQYHALGLLYHI 207
+++ + N+ + A + + + PDL+ +V+ Q+ L+ +N V A+ L I
Sbjct: 144 IEKLMGSSNTYIRRKAAICAMRIVRKVPDLIDHFVDRTQQLLSDKNHGVLLCAVTLAIEI 203
Query: 208 RKSDQLAVTK-------LVAKLTKFT------------MKSPYATCMLIRIVCKLIEDQN 248
+ D A+T LV L + P+ ++R++ +++ +N
Sbjct: 204 CRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHDVSGITDPFLQVKILRLL-RILGKEN 262
Query: 249 AASGDTNWSNSPLFDYLETCL------RHKSETVVYEAAHAIVNLRRTSARELAPAVSVL 302
A + +T + D L ++ +++YE I+ + + + A+++L
Sbjct: 263 AQASET------MNDILAQVATNTEASKNVGNSILYETVLTILEIDADNGLRVM-AINIL 315
Query: 303 QLFCSSPKPVLRFAAVRTLNK 323
F S+ +R+ A+ TL+K
Sbjct: 316 GKFLSNRDNNIRYVALNTLSK 336
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 49 THILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGI----KELSNIAE 104
T L K++ +I GE+L T F + Q + +V+ I + +
Sbjct: 39 TEALKKVIIMILNGEKLPGLLMTIIRFVLP--LQDHTIKKLLLVFWEIVPKTTPDGKLLQ 96
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + ++ +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 49 THILTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSN----IAE 104
T L K++ +I GE+L T F + Q + +V+ I + + +
Sbjct: 39 TEALKKVIIMILNGEKLPGLLMTIIRFVLP--LQDHTIKKLLLVFWEIVPKTTPDGRLLQ 96
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRW-VNEVQEALNSENVMVQYHA 200
++I+ H+ +P+L+ + VNE + M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHA 200
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNI-AEDVIIVTSSLTKDMTGKEDLYRA 126
++ + F + K + DV +++VYL + + E I+ ++ D L R
Sbjct: 58 KDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNPLIRC 117
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRW--VNE 184
AIR + I +++ IE +++ + D N+ V AV+ + + + + DL V +
Sbjct: 118 MAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELGVVED 177
Query: 185 VQEALNSENVMVQYHALGLLYHIRKSDQLAV 215
+ AL+ N +V +A L I D AV
Sbjct: 178 LVNALDDSNPLVIANATAALIEIHNMDMDAV 208
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 52 LTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT- 110
+ +I+ +I +G + A++ F A+ K SK++ ++++VY+ + + +D+ +++
Sbjct: 63 MKRIVGMIAKG-----KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSI 117
Query: 111 SSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHM 170
S+ + + L RA+A+R L SI ++ + +K+A D + V A +I +
Sbjct: 118 STFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKL 177
Query: 171 TKHSPDLVKRWVNEVQEALNSENVMV 196
P+ + + +++ L ++ +V
Sbjct: 178 YSLDPEQKEMLIEVIEKLLKDKSTLV 203
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 52 LTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT- 110
+ +I+ +I +G + A++ F A+ K SK++ ++++VY+ + + +D+ +++
Sbjct: 63 MKRIVGMIAKG-----KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSI 117
Query: 111 SSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHM 170
S+ + + L RA+A+R L SI ++ + +K+A D + V A +I +
Sbjct: 118 STFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKL 177
Query: 171 TKHSPDLVKRWVNEVQEALNSENVMV 196
P+ + + +++ L ++ +V
Sbjct: 178 YSLDPEQKEMLIEVIEKLLKDKSTLV 203
>sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1
Length = 953
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 165 VSIF-------HMTKHSPDLVKRWVNEVQEALNSENV-MVQYHA 200
++I+ H+ +P+L+ ++ + ++A N M+ HA
Sbjct: 157 LAIYTIYRNFEHLIPDAPELIHDFLVDEKDASCKRNAFMMLIHA 200
>sp|Q84K16|AP1G1_ARATH AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana GN=GAMMA-ADR
PE=1 SV=1
Length = 876
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 79 KLFQSKDVILRRMVYLGIKELSNIAEDVI-IVTSSLTKDMTGKEDLYRAAAIRALCSITD 137
KL S +R+ YLG+ L + ++V+ +VT+SL +D+ A+ AL +I
Sbjct: 75 KLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQYVVGLALCALGNICS 134
Query: 138 TTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLVKRWVNEVQEALNSENVMVQ 197
M + + +++ I R+ + A + + + PDL + +VN L ++ V
Sbjct: 135 AEMARDLAPEVERLIQFRDPNIRKKAALCSTRIIRKVPDLAENFVNAAASLLKEKHHGVL 194
Query: 198 YHALGLLYHIRKSDQLAVTKLVAKLTKFTMKS 229
+ L Y + + A+ K T+ +K+
Sbjct: 195 ITGVQLCYELCTINDEALEYFRTKCTEGLIKT 226
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 104 EDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAA 163
+++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V A
Sbjct: 93 QEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNA 152
Query: 164 VVSIFHMTKH-------SPDLVKRWVNEVQE 187
V++IF + K+ P+L+ +++ Q+
Sbjct: 153 VLAIFTIYKNFDWLVPDGPELIANFLDTQQD 183
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 52 LTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT- 110
+ +I+ +I +G + A++ F A+ K SK++ ++++VY+ + + +D+ +++
Sbjct: 63 MKRIVGMIAKG-----KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSI 117
Query: 111 SSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHM 170
S+ + + L RA+A+R L SI ++ + +K+A D + V A +I +
Sbjct: 118 STFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKL 177
Query: 171 TKHSPDLVKRWVNEVQEALNSENVMV 196
P+ + + +++ L ++ +V
Sbjct: 178 YSLDPEQKEMLIEVIEKLLKDKSTLV 203
>sp|Q9NFU6|COPB_TRYBB Coatomer subunit beta OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 982
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 47/89 (52%)
Query: 105 DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAV 164
++I++ S L +D+ + R A+R +C + + +++ + + Q + R + V AV
Sbjct: 96 EMILICSFLREDLLHPNEYIRGLALRFMCKVKERELVEPLVSSVVQNLTHRVTYVRRNAV 155
Query: 165 VSIFHMTKHSPDLVKRWVNEVQEALNSEN 193
+++ + K P+L+ V++ ++ EN
Sbjct: 156 LAVHRIFKRFPELLPDAAELVEKFISEEN 184
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=2
SV=2
Length = 964
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 104 EDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAA 163
+++I+V + KD+ + R + +R LC + + +++ + ++ + R+S V A
Sbjct: 94 QEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNA 153
Query: 164 VVSIFHMTKH-------SPDLVKRWVNEVQE 187
V++IF + K+ P+L+ +++ Q+
Sbjct: 154 VLAIFTIYKNFDWLVPDGPELIASFLDTQQD 184
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRA 126
++ + F + K ++D+ L+++VYL + + D+ I+ ++ KD RA
Sbjct: 49 KDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNPTLRA 108
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLV--KRWVNE 184
AIR + I +I + +++A+ D + V AA V + M + ++ +
Sbjct: 109 LAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNGFIEQ 168
Query: 185 VQEALNSENVMVQYHALGLLYHIRKSD 211
+Q ++ N +V +A+ L I D
Sbjct: 169 LQALVSDPNPVVVANAVRSLAEIHDQD 195
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 52 LTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT- 110
+ +I+ +I +G + A++ F A+ K SK++ ++++VY+ + + +D+ +++
Sbjct: 63 MKRIVGMIAKG-----KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSI 117
Query: 111 SSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHM 170
S+ + + L RA+A+R L SI ++ + +K+A D + V A +I +
Sbjct: 118 STFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKL 177
Query: 171 TKHSPDLVKRWVNEVQEALNSENVMV 196
P+ + + +++ L ++ +V
Sbjct: 178 YSLDPEQKEMLIEIIEKLLKDKSTLV 203
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRA 126
++ + F + Q+ ++ L+++VYL + + D+ I+ +S KD L RA
Sbjct: 45 KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRA 104
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLV--KRWVNE 184
A+R + I + + + +++ + D + V A V + + + +V + +++
Sbjct: 105 LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDS 164
Query: 185 VQEALNSENVMVQYHALGLLYHIRKS 210
+++ + N MV +A+ L I +S
Sbjct: 165 LRDLIADSNPMVVANAVAALSEISES 190
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRA 126
++ + F + Q+ ++ L+++VYL + + D+ I+ +S KD L RA
Sbjct: 45 KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRA 104
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLV--KRWVNE 184
A+R + I + + + +++ + D + V A V + + + +V + +++
Sbjct: 105 LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDS 164
Query: 185 VQEALNSENVMVQYHALGLLYHIRKS 210
+++ + N MV +A+ L I +S
Sbjct: 165 LRDLIADSNPMVVANAVAALSEISES 190
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRA 126
++ + F + Q+ ++ L+++VYL + + D+ I+ +S KD L RA
Sbjct: 45 KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRA 104
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLV--KRWVNE 184
A+R + I + + + +++ + D + V A V + + + +V + +++
Sbjct: 105 LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDS 164
Query: 185 VQEALNSENVMVQYHALGLLYHIRKS 210
+++ + N MV +A+ L I +S
Sbjct: 165 LRDLIADSNPMVVANAVAALSEISES 190
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 68 QEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDV-IIVTSSLTKDMTGKEDLYRA 126
++ + F + Q+ ++ L+++VYL + + D+ I+ +S KD L RA
Sbjct: 45 KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRA 104
Query: 127 AAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHMTKHSPDLV--KRWVNE 184
A+R + I + + + +++ + D + V A V + + + +V + +++
Sbjct: 105 LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDS 164
Query: 185 VQEALNSENVMVQYHALGLLYHIRKS 210
+++ + N MV +A+ L I +S
Sbjct: 165 LRDLIADSNPMVVANAVAALSEISES 190
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 52 LTKILYLINQGEQLGTQEATDAFFAMTKLFQSKDVILRRMVYLGIKELSNIAEDVIIVT- 110
+ +I+ +I +G + A+D F A+ K K++ ++++VY+ + + +D+ +++
Sbjct: 58 MKRIVAMIARG-----KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSI 112
Query: 111 SSLTKDMTGKEDLYRAAAIRALCSITDTTMIQAIERYMKQAIVDRNSAVSSAAVVSIFHM 170
S+ + + L RA+A+R L SI ++ + +K+A D + V A +I +
Sbjct: 113 STFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKL 172
Query: 171 TKHSPDLVKRWVNEVQEALNSENVMV 196
D + + +++ L + +V
Sbjct: 173 YSLDSDQKDQLIEVIEKLLADKTTLV 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,904,352
Number of Sequences: 539616
Number of extensions: 3856775
Number of successful extensions: 9640
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 9531
Number of HSP's gapped (non-prelim): 113
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)