Query psy18021
Match_columns 230
No_of_seqs 196 out of 1567
Neff 10.9
Searched_HMMs 46136
Date Fri Aug 16 20:29:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18021.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18021hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4391|consensus 100.0 4.5E-33 9.8E-38 195.4 11.2 199 1-206 49-284 (300)
2 PLN02298 hydrolase, alpha/beta 99.9 2E-25 4.3E-30 175.9 20.6 200 2-205 28-318 (330)
3 PLN02385 hydrolase; alpha/beta 99.9 1.1E-24 2.5E-29 172.7 21.1 197 4-205 59-346 (349)
4 PRK13604 luxD acyl transferase 99.9 1.3E-24 2.7E-29 165.0 18.3 189 7-205 10-260 (307)
5 KOG1455|consensus 99.9 2.7E-25 5.8E-30 164.6 13.7 195 5-204 26-312 (313)
6 PHA02857 monoglyceride lipase; 99.9 6.4E-24 1.4E-28 163.3 18.7 186 11-204 5-273 (276)
7 KOG1552|consensus 99.9 4.6E-23 9.9E-28 149.9 15.0 184 6-206 35-254 (258)
8 PLN02652 hydrolase; alpha/beta 99.9 1.2E-21 2.6E-26 156.5 20.9 197 6-206 110-389 (395)
9 PRK10749 lysophospholipase L2; 99.9 4.8E-22 1E-26 156.4 17.0 190 7-204 31-329 (330)
10 COG2267 PldB Lysophospholipase 99.9 2.8E-21 6E-26 149.0 18.5 194 5-205 8-295 (298)
11 PRK05077 frsA fermentation/res 99.9 4.6E-21 9.9E-26 154.3 19.6 194 2-205 164-413 (414)
12 TIGR02240 PHA_depoly_arom poly 99.9 2.1E-21 4.6E-26 149.3 17.0 179 15-205 10-267 (276)
13 PRK00870 haloalkane dehalogena 99.9 2.7E-21 5.8E-26 150.6 17.5 191 6-204 21-301 (302)
14 TIGR03343 biphenyl_bphD 2-hydr 99.9 5E-21 1.1E-25 147.6 17.5 163 35-202 30-281 (282)
15 PLN02511 hydrolase 99.9 1.3E-20 2.8E-25 151.0 19.2 204 4-212 69-373 (388)
16 TIGR03611 RutD pyrimidine util 99.9 3.5E-21 7.7E-26 146.0 13.8 162 35-202 13-256 (257)
17 COG1506 DAP2 Dipeptidyl aminop 99.9 1.2E-20 2.7E-25 159.1 17.9 199 5-206 364-618 (620)
18 COG1647 Esterase/lipase [Gener 99.9 4.8E-21 1E-25 135.7 10.5 163 35-202 15-242 (243)
19 PRK03592 haloalkane dehalogena 99.9 9E-20 2E-24 141.6 18.1 179 15-206 15-291 (295)
20 PRK10349 carboxylesterase BioH 99.9 3.4E-20 7.3E-25 141.1 15.2 162 35-202 13-254 (256)
21 PLN03087 BODYGUARD 1 domain co 99.8 1.6E-19 3.4E-24 146.5 18.7 182 15-203 184-478 (481)
22 PLN02824 hydrolase, alpha/beta 99.8 7.2E-20 1.6E-24 142.1 16.1 163 35-203 29-293 (294)
23 PLN02679 hydrolase, alpha/beta 99.8 1.6E-19 3.4E-24 143.7 17.6 164 35-204 88-357 (360)
24 TIGR01250 pro_imino_pep_2 prol 99.8 2.2E-19 4.8E-24 138.2 18.0 163 35-202 25-288 (288)
25 PLN02965 Probable pheophorbida 99.8 9.8E-20 2.1E-24 138.5 15.6 163 37-204 5-253 (255)
26 TIGR01738 bioH putative pimelo 99.8 3.5E-20 7.6E-25 139.3 13.0 161 35-201 4-245 (245)
27 KOG4178|consensus 99.8 1.2E-19 2.5E-24 136.8 14.7 187 9-204 24-320 (322)
28 KOG4409|consensus 99.8 1.1E-19 2.5E-24 137.4 14.2 192 3-203 62-363 (365)
29 PRK10566 esterase; Provisional 99.8 2.9E-19 6.3E-24 135.5 16.1 163 35-204 27-248 (249)
30 PRK06489 hypothetical protein; 99.8 2.2E-19 4.7E-24 143.1 16.1 165 36-205 70-358 (360)
31 TIGR03056 bchO_mg_che_rel puta 99.8 4.3E-19 9.2E-24 136.4 17.2 178 13-202 12-278 (278)
32 TIGR02427 protocat_pcaD 3-oxoa 99.8 8.2E-20 1.8E-24 137.7 12.8 161 35-201 13-250 (251)
33 PLN03084 alpha/beta hydrolase 99.8 4.2E-19 9.1E-24 141.2 17.0 188 2-202 100-382 (383)
34 PRK10673 acyl-CoA esterase; Pr 99.8 2.2E-19 4.8E-24 136.5 13.9 163 35-203 16-254 (255)
35 PLN02578 hydrolase 99.8 1.6E-18 3.5E-23 137.7 18.8 161 35-202 86-353 (354)
36 PRK10985 putative hydrolase; P 99.8 4.3E-18 9.3E-23 133.7 19.5 197 5-205 30-321 (324)
37 KOG1454|consensus 99.8 1.6E-18 3.4E-23 135.1 16.1 194 7-204 26-324 (326)
38 PRK03204 haloalkane dehalogena 99.8 2.7E-18 6E-23 132.6 16.7 184 3-201 11-285 (286)
39 PRK11126 2-succinyl-6-hydroxy- 99.8 8.6E-19 1.9E-23 132.2 13.5 156 35-203 2-241 (242)
40 PLN02894 hydrolase, alpha/beta 99.8 6.4E-18 1.4E-22 136.0 18.9 169 35-209 105-390 (402)
41 PRK07581 hypothetical protein; 99.8 5.5E-18 1.2E-22 134.1 16.4 70 135-206 267-338 (339)
42 TIGR03695 menH_SHCHC 2-succiny 99.8 3E-18 6.6E-23 128.9 13.9 159 36-201 2-250 (251)
43 PF12697 Abhydrolase_6: Alpha/ 99.8 8.7E-19 1.9E-23 130.0 10.5 149 38-192 1-223 (228)
44 TIGR01607 PST-A Plasmodium sub 99.8 1.1E-17 2.4E-22 131.6 17.2 187 11-202 2-331 (332)
45 TIGR01249 pro_imino_pep_1 prol 99.8 1.2E-17 2.7E-22 130.2 16.9 185 6-204 4-305 (306)
46 PRK14875 acetoin dehydrogenase 99.8 5.9E-18 1.3E-22 135.5 14.2 160 35-203 131-370 (371)
47 TIGR03100 hydr1_PEP hydrolase, 99.8 7.5E-17 1.6E-21 123.8 17.9 188 7-202 3-273 (274)
48 PF05448 AXE1: Acetyl xylan es 99.8 2.6E-17 5.5E-22 127.8 14.6 188 5-203 55-319 (320)
49 PRK08775 homoserine O-acetyltr 99.8 1.3E-17 2.9E-22 132.0 13.2 66 139-205 273-340 (343)
50 PF12695 Abhydrolase_5: Alpha/ 99.7 2.5E-17 5.4E-22 114.5 11.8 116 37-185 1-145 (145)
51 PLN02211 methyl indole-3-aceta 99.7 1.2E-16 2.6E-21 122.5 15.6 163 35-203 18-269 (273)
52 KOG4667|consensus 99.7 4E-17 8.7E-22 115.3 11.8 187 6-203 10-257 (269)
53 PRK10115 protease 2; Provision 99.7 5.3E-16 1.1E-20 132.2 17.5 201 4-206 414-677 (686)
54 PLN02872 triacylglycerol lipas 99.7 4.6E-17 1E-21 129.9 10.3 202 2-205 40-390 (395)
55 TIGR01392 homoserO_Ac_trn homo 99.7 1.3E-16 2.7E-21 126.9 12.7 65 136-202 281-351 (351)
56 PRK05855 short chain dehydroge 99.7 2.1E-16 4.6E-21 133.6 14.1 183 12-205 8-293 (582)
57 PRK11071 esterase YqiA; Provis 99.7 1.1E-16 2.4E-21 115.9 10.7 154 36-202 2-189 (190)
58 COG0429 Predicted hydrolase of 99.7 5E-16 1.1E-20 117.2 14.0 197 4-206 47-342 (345)
59 KOG2984|consensus 99.7 4.2E-17 9.2E-22 114.1 6.9 189 2-203 17-275 (277)
60 PLN02980 2-oxoglutarate decarb 99.7 1.4E-15 3E-20 140.0 18.5 166 35-205 1371-1640(1655)
61 COG3458 Acetyl esterase (deace 99.7 1.4E-15 3.1E-20 111.2 13.6 187 7-204 57-317 (321)
62 PRK00175 metX homoserine O-ace 99.7 1.9E-15 4.1E-20 121.2 15.4 70 136-205 302-375 (379)
63 PF00326 Peptidase_S9: Prolyl 99.7 1.3E-16 2.8E-21 118.1 6.4 151 54-206 5-211 (213)
64 COG2945 Predicted hydrolase of 99.7 5.5E-15 1.2E-19 102.9 13.3 163 4-202 2-205 (210)
65 PLN02442 S-formylglutathione h 99.6 1E-14 2.2E-19 112.3 15.7 190 4-205 16-274 (283)
66 KOG1838|consensus 99.6 1.2E-13 2.5E-18 108.1 17.8 203 3-206 90-390 (409)
67 PF01738 DLH: Dienelactone hyd 99.6 6.8E-14 1.5E-18 103.9 15.7 154 20-204 2-217 (218)
68 TIGR01836 PHA_synth_III_C poly 99.6 3.5E-14 7.6E-19 112.8 14.0 166 35-203 62-349 (350)
69 PF06500 DUF1100: Alpha/beta h 99.6 5.8E-14 1.3E-18 110.4 14.2 192 3-205 162-410 (411)
70 TIGR02821 fghA_ester_D S-formy 99.6 2.3E-13 4.9E-18 104.6 16.4 195 2-203 9-273 (275)
71 PRK11460 putative hydrolase; P 99.6 1.6E-13 3.5E-18 102.7 14.2 139 35-206 16-210 (232)
72 PF02273 Acyl_transf_2: Acyl t 99.5 1E-12 2.2E-17 95.1 16.6 174 8-187 4-239 (294)
73 PF02230 Abhydrolase_2: Phosph 99.5 1.1E-12 2.3E-17 97.4 14.4 98 79-204 115-215 (216)
74 PRK10162 acetyl esterase; Prov 99.5 8.8E-12 1.9E-16 97.7 19.7 193 6-205 57-316 (318)
75 TIGR03101 hydr2_PEP hydrolase, 99.5 6.1E-13 1.3E-17 100.8 11.8 102 8-115 2-143 (266)
76 KOG2100|consensus 99.5 2.4E-12 5.2E-17 110.5 16.1 189 15-206 506-749 (755)
77 COG0412 Dienelactone hydrolase 99.5 9.7E-12 2.1E-16 92.9 16.7 166 7-205 3-234 (236)
78 PLN00021 chlorophyllase 99.4 5.6E-12 1.2E-16 98.0 15.1 173 18-209 38-288 (313)
79 KOG2382|consensus 99.4 2.5E-12 5.5E-17 97.5 12.1 166 35-204 52-313 (315)
80 TIGR01838 PHA_synth_I poly(R)- 99.4 1.1E-11 2.4E-16 102.1 15.4 52 136-189 408-459 (532)
81 PRK06765 homoserine O-acetyltr 99.4 2E-11 4.4E-16 97.7 14.8 68 136-203 316-387 (389)
82 TIGR01840 esterase_phb esteras 99.4 6.9E-12 1.5E-16 92.8 11.3 134 35-171 13-196 (212)
83 TIGR00976 /NonD putative hydro 99.4 3.2E-11 7E-16 101.3 16.6 93 11-108 1-134 (550)
84 PF12146 Hydrolase_4: Putative 99.4 2.7E-12 5.8E-17 78.9 6.5 59 16-79 1-59 (79)
85 PF12715 Abhydrolase_7: Abhydr 99.3 1E-11 2.3E-16 96.4 10.0 169 3-181 85-343 (390)
86 KOG2564|consensus 99.3 3.6E-11 7.7E-16 88.8 12.2 188 7-205 51-328 (343)
87 COG4757 Predicted alpha/beta h 99.3 3E-11 6.4E-16 86.9 10.1 185 8-201 7-280 (281)
88 PF00561 Abhydrolase_1: alpha/ 99.3 4E-12 8.6E-17 94.8 5.8 60 136-197 168-228 (230)
89 PRK07868 acyl-CoA synthetase; 99.3 8.7E-11 1.9E-15 105.0 14.9 70 138-209 292-366 (994)
90 PF06342 DUF1057: Alpha/beta h 99.3 2.4E-10 5.2E-15 85.1 14.6 157 7-170 7-239 (297)
91 PF06821 Ser_hydrolase: Serine 99.3 1.1E-10 2.3E-15 82.9 11.6 141 38-202 1-170 (171)
92 KOG2281|consensus 99.3 2.1E-10 4.5E-15 93.6 13.6 193 7-203 614-866 (867)
93 COG0596 MhpC Predicted hydrola 99.2 6.2E-10 1.3E-14 83.9 14.1 162 36-201 22-279 (282)
94 PF02129 Peptidase_S15: X-Pro 99.2 7.5E-10 1.6E-14 85.0 14.4 166 15-185 1-271 (272)
95 COG0400 Predicted esterase [Ge 99.2 3.3E-10 7.1E-15 82.4 10.4 95 79-204 109-205 (207)
96 KOG3043|consensus 99.2 5.1E-10 1.1E-14 80.3 10.2 73 133-205 154-241 (242)
97 PRK05371 x-prolyl-dipeptidyl a 99.1 2.1E-09 4.6E-14 92.9 14.8 153 54-209 270-524 (767)
98 KOG2624|consensus 99.1 1.8E-09 4E-14 85.8 13.2 197 2-204 44-398 (403)
99 KOG1515|consensus 99.1 1.3E-08 2.8E-13 79.4 16.0 190 12-204 67-335 (336)
100 COG0657 Aes Esterase/lipase [L 99.0 5.1E-08 1.1E-12 76.5 16.4 183 16-202 61-308 (312)
101 PF05728 UPF0227: Uncharacteri 99.0 1E-08 2.2E-13 73.7 10.2 153 38-201 2-186 (187)
102 PF12740 Chlorophyllase2: Chlo 98.9 4.9E-08 1.1E-12 73.0 13.4 141 35-191 17-211 (259)
103 COG3571 Predicted hydrolase of 98.9 8.6E-08 1.9E-12 65.4 12.3 128 36-187 15-183 (213)
104 PF07859 Abhydrolase_3: alpha/ 98.9 1.6E-08 3.4E-13 74.7 9.8 146 38-186 1-209 (211)
105 TIGR01849 PHB_depoly_PhaZ poly 98.8 1.2E-07 2.5E-12 75.9 12.9 66 138-203 332-405 (406)
106 KOG4627|consensus 98.8 3E-08 6.4E-13 70.4 8.0 151 35-190 67-252 (270)
107 COG1505 Serine proteases of th 98.8 6.4E-08 1.4E-12 79.0 10.6 198 3-205 391-647 (648)
108 PF03096 Ndr: Ndr family; Int 98.8 5.8E-07 1.3E-11 67.9 14.8 184 9-203 2-278 (283)
109 TIGR01839 PHA_synth_II poly(R) 98.8 3E-07 6.5E-12 75.9 14.2 46 138-185 436-481 (560)
110 KOG2551|consensus 98.7 5.1E-07 1.1E-11 65.1 12.7 103 79-206 114-222 (230)
111 KOG1553|consensus 98.7 1.3E-08 2.8E-13 77.7 4.8 146 7-160 215-400 (517)
112 PF10503 Esterase_phd: Esteras 98.7 1.6E-07 3.5E-12 69.1 9.8 129 35-170 16-196 (220)
113 COG4099 Predicted peptidase [G 98.7 3.6E-07 7.7E-12 68.7 11.4 128 15-171 170-343 (387)
114 COG2021 MET2 Homoserine acetyl 98.7 1.9E-06 4.1E-11 67.0 15.5 67 136-203 299-367 (368)
115 KOG2112|consensus 98.7 3.4E-07 7.4E-12 65.4 10.7 58 143-203 144-203 (206)
116 PF05677 DUF818: Chlamydia CHL 98.7 1.4E-06 3E-11 67.1 14.5 142 6-153 112-300 (365)
117 KOG2931|consensus 98.7 3.6E-06 7.8E-11 63.3 16.2 189 6-205 22-307 (326)
118 PF09752 DUF2048: Uncharacteri 98.7 6.5E-07 1.4E-11 69.4 12.8 163 35-202 92-347 (348)
119 COG1073 Hydrolases of the alph 98.7 2.8E-07 6E-12 71.3 10.4 72 134-205 222-298 (299)
120 PF03403 PAF-AH_p_II: Platelet 98.6 3.5E-07 7.7E-12 73.2 10.3 39 35-74 100-138 (379)
121 PF08538 DUF1749: Protein of u 98.6 2E-06 4.4E-11 65.7 13.4 167 35-201 33-302 (303)
122 PF03959 FSH1: Serine hydrolas 98.6 1.2E-07 2.7E-12 70.0 6.1 49 139-189 157-205 (212)
123 KOG2565|consensus 98.5 1.4E-06 3E-11 67.5 10.9 85 15-102 132-260 (469)
124 cd00707 Pancreat_lipase_like P 98.5 4.2E-07 9.1E-12 69.8 7.2 69 35-105 36-146 (275)
125 PF08840 BAAT_C: BAAT / Acyl-C 98.5 5.5E-08 1.2E-12 71.8 2.1 129 74-205 27-211 (213)
126 KOG2237|consensus 98.5 2E-06 4.4E-11 70.9 10.8 200 5-206 440-707 (712)
127 TIGR03230 lipo_lipase lipoprot 98.4 9.3E-07 2E-11 71.5 7.9 69 35-105 41-153 (442)
128 COG3208 GrsT Predicted thioest 98.4 4.5E-06 9.8E-11 61.4 10.8 160 35-202 7-234 (244)
129 PF07224 Chlorophyllase: Chlor 98.4 6.8E-06 1.5E-10 61.0 11.2 139 35-189 46-234 (307)
130 COG3545 Predicted esterase of 98.4 7.2E-06 1.6E-10 57.2 10.6 145 36-203 3-178 (181)
131 COG3243 PhaC Poly(3-hydroxyalk 98.4 3.4E-06 7.3E-11 66.7 10.0 68 137-206 324-401 (445)
132 COG2936 Predicted acyl esteras 98.4 1.1E-05 2.4E-10 66.6 12.5 97 6-107 19-160 (563)
133 KOG3847|consensus 98.3 3.3E-05 7E-10 58.8 12.8 43 35-78 118-160 (399)
134 PF04083 Abhydro_lipase: Parti 98.3 3.9E-06 8.5E-11 48.8 5.7 50 2-51 8-59 (63)
135 COG4188 Predicted dienelactone 98.3 2.9E-06 6.3E-11 66.1 6.7 56 136-191 244-300 (365)
136 TIGR03502 lipase_Pla1_cef extr 98.3 2E-06 4.4E-11 74.0 6.4 42 35-77 449-490 (792)
137 COG3509 LpqC Poly(3-hydroxybut 98.2 7.5E-05 1.6E-09 56.5 13.5 94 8-106 37-179 (312)
138 PF12048 DUF3530: Protein of u 98.2 0.00024 5.2E-09 55.6 16.2 173 7-204 63-309 (310)
139 PF08386 Abhydrolase_4: TAP-li 98.2 9.5E-06 2.1E-10 52.6 6.5 59 143-203 34-93 (103)
140 PF00975 Thioesterase: Thioest 98.1 0.00012 2.6E-09 54.6 12.8 160 37-200 2-228 (229)
141 PF10142 PhoPQ_related: PhoPQ- 98.1 4.7E-05 1E-09 60.3 10.7 128 79-212 182-328 (367)
142 COG1770 PtrB Protease II [Amin 98.1 0.00012 2.5E-09 61.2 12.7 188 6-196 419-667 (682)
143 PF03583 LIP: Secretory lipase 98.0 0.00013 2.8E-09 56.5 11.5 65 143-209 219-286 (290)
144 PF06057 VirJ: Bacterial virul 97.9 0.00012 2.5E-09 52.3 8.9 148 36-202 3-190 (192)
145 PF10340 DUF2424: Protein of u 97.9 0.00029 6.2E-09 55.8 11.2 175 21-202 108-364 (374)
146 PRK04940 hypothetical protein; 97.9 0.00023 5.1E-09 50.5 9.4 107 79-202 70-178 (180)
147 KOG3253|consensus 97.8 0.00035 7.6E-09 57.9 10.6 53 136-189 297-349 (784)
148 PF10230 DUF2305: Uncharacteri 97.8 0.0018 3.9E-08 49.7 13.9 72 35-106 2-122 (266)
149 PF06028 DUF915: Alpha/beta hy 97.8 9.5E-05 2.1E-09 55.9 6.4 60 143-202 184-253 (255)
150 PRK10439 enterobactin/ferric e 97.7 0.00099 2.1E-08 54.3 12.5 93 79-188 298-394 (411)
151 PF05705 DUF829: Eukaryotic pr 97.7 0.00053 1.1E-08 51.7 10.1 60 142-201 177-240 (240)
152 KOG3975|consensus 97.3 0.019 4.1E-07 42.8 13.1 63 137-200 236-299 (301)
153 PRK10252 entF enterobactin syn 97.2 0.0039 8.5E-08 58.4 11.2 165 35-205 1068-1294(1296)
154 PF00756 Esterase: Putative es 97.2 0.00064 1.4E-08 51.5 4.7 100 79-187 125-238 (251)
155 PF11339 DUF3141: Protein of u 97.0 0.032 6.9E-07 46.1 12.4 56 137-192 291-355 (581)
156 cd00312 Esterase_lipase Estera 96.8 0.0017 3.7E-08 54.4 4.7 38 35-72 95-134 (493)
157 COG3150 Predicted esterase [Ge 96.7 0.035 7.6E-07 38.8 9.5 113 79-202 69-187 (191)
158 COG2382 Fes Enterochelin ester 96.7 0.042 9.1E-07 42.2 10.8 106 79-199 187-294 (299)
159 PF00151 Lipase: Lipase; Inte 96.6 0.0046 1E-07 48.9 5.5 40 35-74 71-115 (331)
160 KOG3101|consensus 96.6 0.013 2.7E-07 42.6 7.0 50 22-72 32-83 (283)
161 PF11144 DUF2920: Protein of u 96.6 0.27 5.8E-06 39.7 15.0 37 144-180 294-332 (403)
162 PF05990 DUF900: Alpha/beta hy 96.5 0.038 8.2E-07 41.5 9.6 44 35-78 18-63 (233)
163 PF07519 Tannase: Tannase and 96.2 0.02 4.3E-07 47.7 7.0 64 142-205 352-428 (474)
164 KOG1551|consensus 96.2 0.095 2.1E-06 39.6 9.7 57 146-205 309-367 (371)
165 PF06850 PHB_depo_C: PHB de-po 96.1 0.011 2.3E-07 42.4 4.3 64 140-203 130-201 (202)
166 PF01674 Lipase_2: Lipase (cla 96.0 0.0067 1.5E-07 44.9 3.1 40 37-76 3-45 (219)
167 COG4814 Uncharacterized protei 95.9 0.23 4.9E-06 37.4 10.3 61 143-203 216-286 (288)
168 PF07819 PGAP1: PGAP1-like pro 95.8 0.067 1.5E-06 40.0 7.7 72 35-106 4-123 (225)
169 PF06441 EHN: Epoxide hydrolas 95.6 0.028 6E-07 36.9 4.4 34 15-52 76-109 (112)
170 PF00135 COesterase: Carboxyle 95.5 0.038 8.1E-07 46.7 6.2 38 35-72 125-165 (535)
171 PTZ00472 serine carboxypeptida 95.4 0.27 5.8E-06 41.0 10.4 61 143-203 364-458 (462)
172 KOG4840|consensus 95.1 0.4 8.8E-06 35.4 9.3 72 37-108 38-146 (299)
173 COG3319 Thioesterase domains o 94.7 0.085 1.8E-06 40.1 5.3 70 36-107 1-104 (257)
174 COG2272 PnbA Carboxylesterase 94.2 0.075 1.6E-06 43.7 4.3 36 35-72 94-134 (491)
175 PF00450 Peptidase_S10: Serine 94.1 0.69 1.5E-05 37.8 9.8 60 143-202 330-414 (415)
176 PF05577 Peptidase_S28: Serine 93.5 0.32 6.9E-06 40.2 6.9 70 35-107 29-149 (434)
177 PF04301 DUF452: Protein of un 93.5 2.3 5.1E-05 31.4 11.2 37 147-188 169-205 (213)
178 PTZ00472 serine carboxypeptida 93.1 0.25 5.5E-06 41.2 5.7 60 16-78 60-137 (462)
179 PLN02213 sinapoylglucose-malat 92.6 0.47 1E-05 37.5 6.4 60 143-203 233-316 (319)
180 COG0627 Predicted esterase [Ge 92.6 0.89 1.9E-05 35.9 7.7 121 79-205 162-312 (316)
181 COG0529 CysC Adenylylsulfate k 92.0 1.8 3.8E-05 31.0 7.7 79 35-117 22-118 (197)
182 COG4287 PqaA PhoPQ-activated p 91.6 0.24 5.2E-06 39.3 3.5 47 140-187 326-372 (507)
183 PF00450 Peptidase_S10: Serine 90.9 0.39 8.4E-06 39.3 4.4 66 10-78 15-101 (415)
184 PLN03016 sinapoylglucose-malat 88.5 1.9 4.1E-05 35.7 6.5 60 143-203 347-430 (433)
185 KOG1282|consensus 88.4 2.2 4.8E-05 35.4 6.8 61 144-204 364-448 (454)
186 PLN02209 serine carboxypeptida 87.0 2.6 5.6E-05 35.0 6.5 60 143-203 351-434 (437)
187 KOG2521|consensus 85.6 17 0.00037 29.2 12.7 66 143-208 225-294 (350)
188 COG1075 LipA Predicted acetylt 85.4 1.8 3.8E-05 34.6 4.7 71 37-108 61-166 (336)
189 COG4947 Uncharacterized protei 85.2 4 8.8E-05 29.0 5.7 102 79-185 111-215 (227)
190 KOG3967|consensus 85.1 5.9 0.00013 29.3 6.7 24 79-102 200-223 (297)
191 PF05576 Peptidase_S37: PS-10 84.4 0.74 1.6E-05 37.3 2.1 66 35-105 63-168 (448)
192 PLN02633 palmitoyl protein thi 83.8 19 0.00042 28.3 11.2 67 37-104 27-129 (314)
193 PF10605 3HBOH: 3HB-oligomer h 82.8 1.1 2.3E-05 38.2 2.5 46 143-188 555-606 (690)
194 KOG2182|consensus 82.0 6.2 0.00013 33.0 6.4 44 35-78 86-133 (514)
195 COG4782 Uncharacterized protei 81.2 10 0.00022 30.5 7.1 42 35-76 116-159 (377)
196 PLN02733 phosphatidylcholine-s 79.6 2.9 6.2E-05 34.7 4.0 54 49-105 107-200 (440)
197 PF06309 Torsin: Torsin; Inte 77.9 3.3 7.2E-05 27.8 3.1 24 35-58 52-76 (127)
198 KOG2541|consensus 77.6 13 0.00028 28.6 6.4 66 37-104 25-126 (296)
199 COG4822 CbiK Cobalamin biosynt 76.7 6.8 0.00015 28.9 4.6 37 35-71 138-175 (265)
200 PF06792 UPF0261: Uncharacteri 76.1 42 0.00092 27.6 11.2 41 35-77 185-225 (403)
201 KOG2183|consensus 75.1 11 0.00025 30.8 5.9 67 36-104 81-200 (492)
202 smart00824 PKS_TE Thioesterase 73.3 13 0.00028 26.6 5.7 47 141-189 151-198 (212)
203 COG4553 DepA Poly-beta-hydroxy 72.4 46 0.00099 26.2 10.4 63 143-205 339-408 (415)
204 KOG4388|consensus 72.2 4.1 8.9E-05 34.8 3.0 41 35-78 396-442 (880)
205 PF07519 Tannase: Tannase and 72.0 30 0.00066 29.2 8.1 32 79-112 125-156 (474)
206 PF01583 APS_kinase: Adenylyls 70.5 9.6 0.00021 26.7 4.1 79 35-117 1-97 (156)
207 KOG1282|consensus 69.2 12 0.00025 31.3 5.0 37 10-48 48-86 (454)
208 COG3946 VirJ Type IV secretory 68.6 4.6 9.9E-05 32.9 2.4 42 35-77 260-302 (456)
209 TIGR00632 vsr DNA mismatch end 67.1 14 0.00031 24.5 4.1 13 57-69 101-113 (117)
210 cd01523 RHOD_Lact_B Member of 65.9 11 0.00024 23.7 3.5 27 35-66 62-88 (100)
211 TIGR02884 spore_pdaA delta-lac 63.4 10 0.00022 28.3 3.4 35 36-70 187-221 (224)
212 PLN02606 palmitoyl-protein thi 62.6 47 0.001 26.2 6.8 26 79-104 105-130 (306)
213 PLN02209 serine carboxypeptida 59.1 30 0.00065 28.9 5.6 31 16-48 51-81 (437)
214 COG1087 GalE UDP-glucose 4-epi 59.0 31 0.00066 27.2 5.2 37 39-78 3-39 (329)
215 KOG1516|consensus 58.7 8.3 0.00018 33.0 2.5 38 35-72 112-153 (545)
216 PF05057 DUF676: Putative seri 56.1 13 0.00028 27.6 2.9 17 35-51 4-20 (217)
217 cd01521 RHOD_PspE2 Member of t 55.8 32 0.00069 22.1 4.4 33 35-70 65-97 (110)
218 COG2819 Predicted hydrolase of 55.3 96 0.0021 24.0 8.3 24 79-104 147-170 (264)
219 COG0607 PspE Rhodanese-related 54.1 21 0.00045 22.7 3.3 28 35-67 62-89 (110)
220 KOG2872|consensus 53.8 13 0.00029 28.8 2.5 29 35-71 252-280 (359)
221 TIGR03707 PPK2_P_aer polyphosp 53.4 25 0.00053 26.5 3.9 38 35-72 30-68 (230)
222 PLN03016 sinapoylglucose-malat 52.9 44 0.00096 27.9 5.7 31 16-48 49-79 (433)
223 COG0218 Predicted GTPase [Gene 52.9 90 0.002 23.0 10.1 111 66-203 72-198 (200)
224 TIGR02764 spore_ybaN_pdaB poly 51.6 15 0.00033 26.4 2.6 35 36-70 152-188 (191)
225 cd01520 RHOD_YbbB Member of th 50.9 24 0.00053 23.5 3.3 31 35-70 87-118 (128)
226 TIGR03709 PPK2_rel_1 polyphosp 50.5 28 0.00061 26.8 3.9 38 35-72 55-93 (264)
227 KOG2170|consensus 49.7 21 0.00045 28.1 3.0 17 35-51 109-125 (344)
228 PF03976 PPK2: Polyphosphate k 49.4 17 0.00037 27.3 2.6 38 35-72 30-68 (228)
229 cd01518 RHOD_YceA Member of th 46.6 24 0.00053 22.2 2.7 31 35-70 62-93 (101)
230 PF10686 DUF2493: Protein of u 45.3 31 0.00068 20.5 2.8 38 35-75 31-71 (71)
231 PF02089 Palm_thioest: Palmito 43.6 40 0.00086 26.2 3.8 25 79-104 90-114 (279)
232 PRK13230 nitrogenase reductase 42.6 61 0.0013 25.0 4.8 40 37-77 3-43 (279)
233 PF03853 YjeF_N: YjeF-related 41.8 30 0.00066 24.5 2.8 35 35-70 25-59 (169)
234 cd03818 GT1_ExpC_like This fam 41.4 54 0.0012 26.6 4.6 36 38-76 2-37 (396)
235 PF07082 DUF1350: Protein of u 40.1 1.7E+02 0.0037 22.4 14.6 58 144-205 164-233 (250)
236 cd01533 4RHOD_Repeat_2 Member 40.1 46 0.00099 21.3 3.3 31 35-70 67-99 (109)
237 TIGR02873 spore_ylxY probable 40.0 33 0.00072 26.5 2.9 34 36-70 231-264 (268)
238 PF00326 Peptidase_S9: Prolyl 39.8 46 0.001 24.2 3.7 42 35-76 144-187 (213)
239 TIGR02798 ligK_PcmE 4-carboxy- 38.5 1.7E+02 0.0037 22.0 8.1 98 61-170 74-185 (222)
240 cd01534 4RHOD_Repeat_3 Member 38.4 49 0.0011 20.5 3.1 27 35-66 57-83 (95)
241 PF01656 CbiA: CobQ/CobB/MinD/ 37.2 66 0.0014 22.8 4.1 34 39-72 2-36 (195)
242 PF05576 Peptidase_S37: PS-10 36.9 52 0.0011 27.2 3.6 46 140-189 348-393 (448)
243 PF12694 MoCo_carrier: Putativ 36.8 1.2E+02 0.0026 21.0 4.8 62 136-205 83-144 (145)
244 PRK09262 hypothetical protein; 35.9 1.9E+02 0.0041 21.8 7.5 95 65-170 79-187 (225)
245 TIGR01281 DPOR_bchL light-inde 35.2 73 0.0016 24.3 4.2 33 43-75 7-40 (268)
246 COG3727 Vsr DNA G:T-mismatch r 34.7 64 0.0014 21.9 3.2 13 35-47 57-69 (150)
247 PRK13255 thiopurine S-methyltr 34.5 43 0.00094 24.9 2.7 28 36-71 40-67 (218)
248 PF13207 AAA_17: AAA domain; P 33.9 43 0.00093 21.7 2.5 31 38-71 1-32 (121)
249 TIGR03840 TMPT_Se_Te thiopurin 33.8 46 0.001 24.7 2.8 28 36-71 37-64 (213)
250 cd01525 RHOD_Kc Member of the 33.7 69 0.0015 20.1 3.3 31 35-70 66-97 (105)
251 TIGR03371 cellulose_yhjQ cellu 33.7 82 0.0018 23.5 4.2 39 37-75 3-42 (246)
252 COG0859 RfaF ADP-heptose:LPS h 33.1 2.5E+02 0.0055 22.4 8.2 105 35-157 175-284 (334)
253 COG3640 CooC CO dehydrogenase 32.5 87 0.0019 23.9 3.9 35 38-72 2-38 (255)
254 cd02117 NifH_like This family 32.3 1E+02 0.0023 22.5 4.5 34 43-76 7-41 (212)
255 PF00581 Rhodanese: Rhodanese- 32.2 1E+02 0.0022 19.3 4.0 12 59-70 92-104 (113)
256 cd02032 Bchl_like This family 31.8 77 0.0017 24.2 3.8 33 43-75 7-40 (267)
257 KOG3724|consensus 30.6 1.1E+02 0.0024 27.8 4.7 38 36-73 90-142 (973)
258 PRK00889 adenylylsulfate kinas 30.3 1.2E+02 0.0025 21.3 4.4 37 35-71 3-40 (175)
259 PF00578 AhpC-TSA: AhpC/TSA fa 30.2 1.5E+02 0.0033 19.0 4.8 60 4-71 3-67 (124)
260 TIGR01287 nifH nitrogenase iro 30.2 1.1E+02 0.0025 23.4 4.6 36 42-77 6-42 (275)
261 PRK13236 nitrogenase reductase 30.1 1.1E+02 0.0024 24.0 4.4 41 38-78 8-49 (296)
262 cd02036 MinD Bacterial cell di 29.9 98 0.0021 21.6 3.9 35 38-72 2-37 (179)
263 PRK01415 hypothetical protein; 29.7 79 0.0017 24.2 3.4 39 35-86 172-211 (247)
264 cd02040 NifH NifH gene encodes 29.6 1.3E+02 0.0028 22.9 4.7 40 37-77 3-43 (270)
265 PLN03050 pyridoxine (pyridoxam 29.4 1E+02 0.0022 23.6 4.0 33 37-70 62-94 (246)
266 PF02230 Abhydrolase_2: Phosph 29.3 95 0.0021 22.7 3.9 43 35-77 155-199 (216)
267 PF03205 MobB: Molybdopterin g 29.2 1.2E+02 0.0025 20.7 4.0 41 38-78 2-43 (140)
268 PRK13256 thiopurine S-methyltr 28.9 46 0.00099 25.0 2.1 14 58-71 60-73 (226)
269 KOG1470|consensus 28.9 3.1E+02 0.0067 22.0 6.7 42 64-107 151-197 (324)
270 COG1255 Uncharacterized protei 27.7 60 0.0013 21.6 2.1 22 51-72 24-45 (129)
271 cd01526 RHOD_ThiF Member of th 27.5 83 0.0018 20.6 3.0 31 35-70 73-105 (122)
272 cd02037 MRP-like MRP (Multiple 27.4 1.1E+02 0.0023 21.4 3.7 38 38-75 2-40 (169)
273 PRK13185 chlL protochlorophyll 27.2 1.5E+02 0.0032 22.6 4.7 39 37-76 4-43 (270)
274 PHA02518 ParA-like protein; Pr 26.9 1.8E+02 0.004 20.9 5.0 40 37-76 2-42 (211)
275 TIGR02016 BchX chlorophyllide 26.8 1.3E+02 0.0028 23.6 4.3 37 38-75 3-40 (296)
276 cd01528 RHOD_2 Member of the R 26.8 1.1E+02 0.0023 19.2 3.3 31 35-70 59-90 (101)
277 TIGR03708 poly_P_AMP_trns poly 26.4 1.2E+02 0.0026 25.9 4.3 40 35-74 39-79 (493)
278 CHL00175 minD septum-site dete 26.3 1.4E+02 0.003 23.0 4.4 38 36-73 16-54 (281)
279 PRK06696 uridine kinase; Valid 26.3 1.5E+02 0.0033 21.9 4.5 37 35-71 21-58 (223)
280 COG1506 DAP2 Dipeptidyl aminop 26.2 1.2E+02 0.0026 26.7 4.4 42 35-76 551-594 (620)
281 PRK03846 adenylylsulfate kinas 26.1 1.5E+02 0.0032 21.5 4.3 36 35-70 23-59 (198)
282 COG0622 Predicted phosphoester 26.0 1.1E+02 0.0024 21.8 3.5 33 37-69 83-115 (172)
283 cd01983 Fer4_NifH The Fer4_Nif 25.8 1.4E+02 0.0031 17.8 3.8 30 41-70 4-34 (99)
284 COG2939 Carboxypeptidase C (ca 25.6 1.4E+02 0.0031 25.4 4.5 29 19-49 87-115 (498)
285 PRK09072 short chain dehydroge 25.6 1.1E+02 0.0025 23.0 3.8 32 38-72 7-38 (263)
286 cd01519 RHOD_HSP67B2 Member of 25.3 56 0.0012 20.6 1.8 31 35-70 67-98 (106)
287 PRK13705 plasmid-partitioning 25.3 1.5E+02 0.0033 24.4 4.6 41 36-76 107-149 (388)
288 TIGR01969 minD_arch cell divis 25.1 1.5E+02 0.0032 22.1 4.4 38 37-74 2-40 (251)
289 cd07561 Peptidase_S41_CPP_like 25.1 1.5E+02 0.0033 22.7 4.4 40 37-76 67-106 (256)
290 TIGR01007 eps_fam capsular exo 24.8 1.9E+02 0.004 20.9 4.7 37 37-73 19-56 (204)
291 PRK00652 lpxK tetraacyldisacch 24.7 2E+02 0.0043 23.0 5.0 28 49-77 65-92 (325)
292 PF01075 Glyco_transf_9: Glyco 24.6 1.4E+02 0.0029 22.3 4.0 105 35-154 105-213 (247)
293 PRK12828 short chain dehydroge 24.5 1.2E+02 0.0026 22.2 3.7 31 38-71 9-39 (239)
294 cd01532 4RHOD_Repeat_1 Member 24.4 1.5E+02 0.0034 18.1 3.7 30 35-67 51-81 (92)
295 TIGR00455 apsK adenylylsulfate 24.0 1.6E+02 0.0035 20.8 4.2 36 35-70 17-53 (184)
296 PF02610 Arabinose_Isome: L-ar 23.8 1.9E+02 0.0042 23.5 4.7 62 136-205 90-168 (359)
297 cd01524 RHOD_Pyr_redox Member 23.8 1.1E+02 0.0023 18.6 2.8 31 35-70 52-82 (90)
298 KOG0407|consensus 23.7 2.2E+02 0.0047 18.5 4.6 56 35-90 38-110 (139)
299 PRK11460 putative hydrolase; P 23.6 1.8E+02 0.0039 21.7 4.5 41 35-75 148-190 (232)
300 cd01444 GlpE_ST GlpE sulfurtra 23.6 1.5E+02 0.0032 18.1 3.5 29 35-68 57-86 (96)
301 PRK08177 short chain dehydroge 23.5 1.4E+02 0.0031 21.8 3.9 33 38-73 3-35 (225)
302 COG4221 Short-chain alcohol de 23.4 1.4E+02 0.003 22.8 3.7 33 37-72 7-39 (246)
303 cd01447 Polysulfide_ST Polysul 23.2 90 0.0019 19.4 2.5 31 35-70 62-93 (103)
304 PHA02519 plasmid partition pro 23.1 2E+02 0.0044 23.7 4.9 40 37-76 108-149 (387)
305 PRK08245 hypothetical protein; 23.1 3.4E+02 0.0074 20.6 8.5 97 64-170 88-198 (240)
306 cd01527 RHOD_YgaP Member of th 22.7 1.6E+02 0.0035 18.2 3.6 31 35-70 55-86 (99)
307 PRK10037 cell division protein 22.7 1.7E+02 0.0036 22.1 4.2 39 37-75 3-42 (250)
308 PRK10964 ADP-heptose:LPS hepto 22.6 3.8E+02 0.0083 21.0 9.2 104 35-156 178-285 (322)
309 TIGR00223 panD L-aspartate-alp 22.6 2.5E+02 0.0055 18.9 4.6 36 4-45 39-75 (126)
310 PRK05786 fabG 3-ketoacyl-(acyl 22.4 1.3E+02 0.0028 22.2 3.5 31 38-71 7-37 (238)
311 PF05724 TPMT: Thiopurine S-me 22.1 1.2E+02 0.0026 22.6 3.2 37 37-87 39-75 (218)
312 PRK07326 short chain dehydroge 22.0 1.5E+02 0.0033 21.7 3.9 31 38-71 8-38 (237)
313 PRK07523 gluconate 5-dehydroge 22.0 1.4E+02 0.003 22.3 3.7 32 38-72 12-43 (255)
314 TIGR01968 minD_bact septum sit 22.0 1.9E+02 0.0041 21.7 4.4 37 37-73 3-40 (261)
315 PRK13235 nifH nitrogenase redu 21.9 2.1E+02 0.0046 21.9 4.7 39 37-76 3-42 (274)
316 KOG2585|consensus 21.9 1.5E+02 0.0032 24.8 3.8 35 35-70 266-300 (453)
317 PF07859 Abhydrolase_3: alpha/ 21.9 1.5E+02 0.0032 21.3 3.7 40 35-74 166-205 (211)
318 cd01529 4RHOD_Repeats Member o 21.9 99 0.0022 19.1 2.4 31 35-70 57-88 (96)
319 PRK03094 hypothetical protein; 21.8 78 0.0017 19.4 1.8 20 51-70 9-28 (80)
320 cd01448 TST_Repeat_1 Thiosulfa 21.8 1.3E+02 0.0029 19.4 3.2 32 35-70 80-112 (122)
321 PF11187 DUF2974: Protein of u 21.6 64 0.0014 24.2 1.7 32 74-105 89-122 (224)
322 PRK13232 nifH nitrogenase redu 21.5 1.9E+02 0.0042 22.1 4.4 40 38-78 4-44 (273)
323 PLN02733 phosphatidylcholine-s 21.5 46 0.001 27.8 1.0 52 147-203 370-421 (440)
324 PRK08703 short chain dehydroge 21.5 1.6E+02 0.0036 21.7 4.0 32 38-72 8-39 (239)
325 PF10432 bact-PGI_C: Bacterial 21.5 2E+02 0.0044 20.0 4.1 56 35-90 72-137 (155)
326 COG0482 TrmU Predicted tRNA(5- 21.4 94 0.002 25.2 2.6 37 35-76 4-40 (356)
327 PRK08643 acetoin reductase; Va 21.4 1.6E+02 0.0034 22.0 3.9 32 38-72 4-35 (256)
328 PRK05449 aspartate alpha-decar 21.3 2.7E+02 0.0059 18.8 4.6 36 4-45 39-75 (126)
329 PRK07933 thymidylate kinase; V 21.1 2.5E+02 0.0053 20.8 4.7 41 38-78 2-43 (213)
330 TIGR01425 SRP54_euk signal rec 21.0 1.8E+02 0.0038 24.4 4.2 37 35-71 99-136 (429)
331 PF04763 DUF562: Protein of un 20.8 2.9E+02 0.0063 19.0 4.6 39 35-73 17-61 (146)
332 PRK13869 plasmid-partitioning 20.8 2.9E+02 0.0063 22.9 5.4 40 36-75 122-162 (405)
333 PRK08339 short chain dehydroge 20.5 1.7E+02 0.0037 22.1 3.9 31 38-71 10-40 (263)
334 PRK07667 uridine kinase; Provi 20.5 2.6E+02 0.0056 20.2 4.6 40 35-74 16-56 (193)
335 PRK06953 short chain dehydroge 20.5 1.8E+02 0.004 21.2 4.0 32 38-72 3-34 (222)
336 KOG1201|consensus 20.4 1.8E+02 0.004 22.9 3.9 36 37-75 39-74 (300)
337 cd02033 BchX Chlorophyllide re 20.4 2.4E+02 0.0051 22.7 4.7 39 37-75 32-71 (329)
338 PF07521 RMMBL: RNA-metabolisi 20.2 96 0.0021 16.1 1.7 8 36-43 33-40 (43)
339 PRK05717 oxidoreductase; Valid 20.2 1.6E+02 0.0035 22.0 3.7 31 38-71 12-42 (255)
No 1
>KOG4391|consensus
Probab=100.00 E-value=4.5e-33 Score=195.41 Aligned_cols=199 Identities=45% Similarity=0.756 Sum_probs=180.0
Q ss_pred CCCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC--
Q psy18021 1 MHGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-- 78 (230)
Q Consensus 1 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-- 78 (230)
|++++++++.+++.|..+|.+|++.... + .|+++++||..++.++......-.+...+++|+.++|||+|.|.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E~-S----~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSES-S----RPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecccC-C----CceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 6899999999999999999999988433 2 78999999999998888887777788889999999999999998
Q ss_pred -----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhccc
Q psy18021 79 -----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRK 123 (230)
Q Consensus 79 -----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (230)
||++|+.+|+.. .+++.++|+.++|.++..+.-........++
T Consensus 124 psE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~--~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~ 201 (300)
T KOG4391|consen 124 PSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN--SDRISAIIVENTFLSIPHMAIPLVFPFPMKY 201 (300)
T ss_pred ccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc--hhheeeeeeechhccchhhhhheeccchhhH
Confidence 999999999998 7899999999999999766655443344578
Q ss_pred ccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 124 MPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
++.++.++.|.+...+++.+.|.|++.|.+|.+||+.+++++++..++..+++..||++.|+..+..+.+++.|.+||.+
T Consensus 202 i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 202 IPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAE 281 (300)
T ss_pred HHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hcc
Q psy18021 204 AND 206 (230)
Q Consensus 204 ~~~ 206 (230)
...
T Consensus 282 ~~~ 284 (300)
T KOG4391|consen 282 VVK 284 (300)
T ss_pred hcc
Confidence 764
No 2
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=2e-25 Score=175.85 Aligned_cols=200 Identities=16% Similarity=0.203 Sum_probs=142.3
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--- 78 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--- 78 (230)
.+++.++..+.+.||.++.++.+.+....+ . +++|||+||++.+....+..+...|.++||+|+++|+||||.|.
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~-~-~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~ 105 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSSP-P-RALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR 105 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCCC-C-ceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc
Confidence 466777888999999999987765543211 1 67899999998764333455566678889999999999999885
Q ss_pred --------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH----------
Q psy18021 79 --------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD---------- 110 (230)
Q Consensus 79 --------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~---------- 110 (230)
||.+++.++..+ |.+++++|+++|+.....
T Consensus 106 ~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 183 (330)
T PLN02298 106 AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLAN--PEGFDGAVLVAPMCKISDKIRPPWPIPQ 183 (330)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcC--cccceeEEEecccccCCcccCCchHHHH
Confidence 999999999887 889999999998643211
Q ss_pred H---HHHhhhhhhc-c---ccccc---------cccc--Ccc-----------------cHHhhhcCCCCEEEEEecCCc
Q psy18021 111 M---ALILLKWNVL-R---KMPLF---------CFKN--KFL-----------------SHWKIERVSNPTFFIVGLNDH 155 (230)
Q Consensus 111 ~---~~~~~~~~~~-~---~~~~~---------~~~~--~~~-----------------~~~~~~~i~~Pvl~i~g~~D~ 155 (230)
. .......... . ..... ...+ .+. ....+.++++|+|++||++|.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 263 (330)
T PLN02298 184 ILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADV 263 (330)
T ss_pred HHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCC
Confidence 0 0000000000 0 00000 0000 000 123456789999999999999
Q ss_pred ccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-----HHHHHHHHHHHhc
Q psy18021 156 LVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-----YYHTISQFLAKAN 205 (230)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-----~~~~i~~fl~~~~ 205 (230)
++|++.++.+++.++.++++++++++++|..+.+.++ +.+.|.+||.+.+
T Consensus 264 ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 264 VTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred CCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998876568999999999999887662 5677888988875
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=1.1e-24 Score=172.67 Aligned_cols=197 Identities=20% Similarity=0.285 Sum_probs=142.7
Q ss_pred CCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
+.+++..+.+.||.++.+..+.+.+..+ +++|||+||++++...++..+...|+++||+|+++|+||||.|.
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~---~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENSRP---KAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCCCC---CeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 4466777788899999887776643221 67999999999885555667777788889999999999999886
Q ss_pred ------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH------HH----
Q psy18021 79 ------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD------MA---- 112 (230)
Q Consensus 79 ------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~------~~---- 112 (230)
||.+++.++..+ |.+++++|+++|.....+ ..
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~--p~~v~glVLi~p~~~~~~~~~~~~~~~~~~ 213 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ--PNAWDGAILVAPMCKIADDVVPPPLVLQIL 213 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC--cchhhheeEecccccccccccCchHHHHHH
Confidence 999999999988 889999999998543210 00
Q ss_pred ---HHhh-hhhhc--cccccccc----------------cc--C-----------cccHHhhhcCCCCEEEEEecCCccc
Q psy18021 113 ---LILL-KWNVL--RKMPLFCF----------------KN--K-----------FLSHWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 113 ---~~~~-~~~~~--~~~~~~~~----------------~~--~-----------~~~~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
.... ..... ........ .. . .+....+.++++|+|++||++|.++
T Consensus 214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv 293 (349)
T PLN02385 214 ILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVT 293 (349)
T ss_pred HHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCcc
Confidence 0000 00000 00000000 00 0 0112345678999999999999999
Q ss_pred ChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-----HHHHHHHHHHHhc
Q psy18021 158 PPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-----YYHTISQFLAKAN 205 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-----~~~~i~~fl~~~~ 205 (230)
|++.++.+++.+..++++++++++++|....+.++ +.+.|.+||++..
T Consensus 294 ~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 294 DPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred ChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 99999999998875568999999999999887773 6778899998765
No 4
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=1.3e-24 Score=164.99 Aligned_cols=189 Identities=14% Similarity=0.133 Sum_probs=140.8
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC-cCCC-------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY-GKSQ------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~-G~s~------- 78 (230)
.+..+.+.||..|.+|+.+|.+...++ .++||++||++++. ..+..+++.|+++||.|+.||+||+ |.|+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~-~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t 87 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKK-NNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFT 87 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCC-CCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCc
Confidence 456788999999999999987432222 68999999999984 4578888889999999999999988 8886
Q ss_pred ------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhh----cccc
Q psy18021 79 ------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNV----LRKM 124 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~----~~~~ 124 (230)
||.+++.+|... +++++|+.+|+.++.+.+........ ....
T Consensus 88 ~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~l 163 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDTLERALGYDYLSLPIDEL 163 (307)
T ss_pred ccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHHHHHhhhcccccCccccc
Confidence 899987666644 59999999999998877764332200 0011
Q ss_pred cc------------ccccc----C----cccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCC
Q psy18021 125 PL------------FCFKN----K----FLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSH 184 (230)
Q Consensus 125 ~~------------~~~~~----~----~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H 184 (230)
+. .+... . ..+.+.++++++|+|+|||+.|.+||++.++++++.+++.++++++++|++|
T Consensus 164 p~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H 243 (307)
T PRK13604 164 PEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSH 243 (307)
T ss_pred ccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcc
Confidence 00 11111 1 1223567788999999999999999999999999998765799999999999
Q ss_pred CCcCCCCcHHHHHHHHHHHhc
Q psy18021 185 NDTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 185 ~~~~~~~~~~~~i~~fl~~~~ 205 (230)
.....- -.+.+|...+.
T Consensus 244 ~l~~~~----~~~~~~~~~~~ 260 (307)
T PRK13604 244 DLGENL----VVLRNFYQSVT 260 (307)
T ss_pred ccCcch----HHHHHHHHHHH
Confidence 765432 23455655544
No 5
>KOG1455|consensus
Probab=99.93 E-value=2.7e-25 Score=164.62 Aligned_cols=195 Identities=18% Similarity=0.240 Sum_probs=147.8
Q ss_pred CceeEEEEccCCCEEEEEEecCCCc-ccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDV-KAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
.+.+..+.+.+|..+.+..+.+... .+ +..|+++||+++.....+..++..|+..||.|+++|++|||.|+
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~p---r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~y 102 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEP---RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAY 102 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCC---ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCccc
Confidence 3456677888999998888877543 22 56899999999997677887888899999999999999999998
Q ss_pred ------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHH----------
Q psy18021 79 ------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMA---------- 112 (230)
Q Consensus 79 ------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~---------- 112 (230)
||++++.++... |...+++|+++|...+.+..
T Consensus 103 i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~--p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l 180 (313)
T KOG1455|consen 103 VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD--PNFWDGAILVAPMCKISEDTKPHPPVISIL 180 (313)
T ss_pred CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC--CcccccceeeecccccCCccCCCcHHHHHH
Confidence 999999999987 89999999999865432110
Q ss_pred ----HHhhhhhhcccc--ccccccc-----------------------------CcccHHhhhcCCCCEEEEEecCCccc
Q psy18021 113 ----LILLKWNVLRKM--PLFCFKN-----------------------------KFLSHWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 113 ----~~~~~~~~~~~~--~~~~~~~-----------------------------~~~~~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
.....|+..+.- .....++ ..+..+.+.++++|++++||++|.++
T Consensus 181 ~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VT 260 (313)
T KOG1455|consen 181 TLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVT 260 (313)
T ss_pred HHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCccc
Confidence 111111100000 0000000 01124567788999999999999999
Q ss_pred ChHHHHHHHHHhCCCcceEEEeCCCCCCCcC-CCC---c-HHHHHHHHHHHh
Q psy18021 158 PPSMMVKLHENSGGILKQIVLFESGSHNDTW-KCS---G-YYHTISQFLAKA 204 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~---~-~~~~i~~fl~~~ 204 (230)
.++.++++++...+.++++.+|||+-|.... +.+ + +...|.+||++.
T Consensus 261 Dp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 261 DPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999989999999999999886 333 2 778899999874
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=6.4e-24 Score=163.30 Aligned_cols=186 Identities=14% Similarity=0.155 Sum_probs=135.3
Q ss_pred EEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------
Q psy18021 11 VKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------ 78 (230)
Q Consensus 11 ~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------ 78 (230)
+...||..|.+.++.+...+ +++|+++||++++ ...+..+.+.|++.||.|+++|+||||.|.
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~----~~~v~llHG~~~~-~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~ 79 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYP----KALVFISHGAGEH-SGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVY 79 (276)
T ss_pred eecCCCCEEEEEeccCCCCC----CEEEEEeCCCccc-cchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHH
Confidence 34568999999887775322 6788888999988 445666777888889999999999999886
Q ss_pred ---------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH-----HHHHh-----hhhhhc
Q psy18021 79 ---------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD-----MALIL-----LKWNVL 121 (230)
Q Consensus 79 ---------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~-----~~~~~~ 121 (230)
||.+++.++... |++++++|+++|...... ..... ......
T Consensus 80 ~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~--p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T PHA02857 80 VRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN--PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIV 157 (276)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC--ccccceEEEeccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 999999999887 889999999999654211 00000 000000
Q ss_pred c-ccccccc----------ccC-------------------cccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC
Q psy18021 122 R-KMPLFCF----------KNK-------------------FLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG 171 (230)
Q Consensus 122 ~-~~~~~~~----------~~~-------------------~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~ 171 (230)
. ..+.+.. .+. .+....+.++++|+|+++|++|.++|++.++++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~ 237 (276)
T PHA02857 158 GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC 237 (276)
T ss_pred CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC
Confidence 0 0000000 000 011245678899999999999999999999999998864
Q ss_pred CcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHHh
Q psy18021 172 ILKQIVLFESGSHNDTWKCS----GYYHTISQFLAKA 204 (230)
Q Consensus 172 ~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~ 204 (230)
++++.+++++||....+.+ ++++.|.+||++.
T Consensus 238 -~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 238 -NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred -CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 5899999999999998765 3778889999875
No 7
>KOG1552|consensus
Probab=99.91 E-value=4.6e-23 Score=149.88 Aligned_cols=184 Identities=27% Similarity=0.400 Sum_probs=151.2
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
.+-+.+++..|..+.+.++.+.... .+++|++||...+...+...+..+-...+++++.+||+|+|.|.
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~~----~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n 110 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEAA----HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERN 110 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcccc----ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccccc
Confidence 3456677888888888888777653 57999999998887777777776655568999999999999998
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhccccccccc
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCF 129 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (230)
|...++.+|++. | ++++|+.+|+++..+.+....... ..
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~--~--~~alVL~SPf~S~~rv~~~~~~~~--------~~ 178 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY--P--LAAVVLHSPFTSGMRVAFPDTKTT--------YC 178 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC--C--cceEEEeccchhhhhhhccCcceE--------Ee
Confidence 888889999998 4 999999999999877665532110 11
Q ss_pred ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhcc
Q psy18021 130 KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAND 206 (230)
Q Consensus 130 ~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~ 206 (230)
-+.|...+.++.+++|||++||++|++++..+..++++..+.+ .+..+++|+||......+++.+.+..|+.....
T Consensus 179 ~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~-~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 179 FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK-VEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred eccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc-CCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 1234447788899999999999999999999999999999975 789999999999999889999999999988663
No 8
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=1.2e-21 Score=156.47 Aligned_cols=197 Identities=15% Similarity=0.202 Sum_probs=138.2
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
..+..+...++..+.+..+.+....+ +++||++||++++ ...+..++..|+++||.|+++|+||||.|.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~---~~~Vl~lHG~~~~-~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 185 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEM---RGILIIIHGLNEH-SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVP 185 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCC---ceEEEEECCchHH-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCc
Confidence 45567778888888887776643221 6799999999988 444566677788889999999999999876
Q ss_pred --------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH------HH----HHhh
Q psy18021 79 --------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD------MA----LILL 116 (230)
Q Consensus 79 --------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~------~~----~~~~ 116 (230)
||.+++.++...+.++++.++|+.+|+..... .. ....
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 89998877754322358999999999754321 00 0000
Q ss_pred hhhhcccc----------cccc---cccCc-------------------ccHHhhhcCCCCEEEEEecCCcccChHHHHH
Q psy18021 117 KWNVLRKM----------PLFC---FKNKF-------------------LSHWKIERVSNPTFFIVGLNDHLVPPSMMVK 164 (230)
Q Consensus 117 ~~~~~~~~----------~~~~---~~~~~-------------------~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~ 164 (230)
........ +... ..+.. .....+.++++|+|++||++|.++|++.+++
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 00000000 0000 00000 0123456789999999999999999999999
Q ss_pred HHHHhCCCcceEEEeCCCCCCCcCCC-C-cHHHHHHHHHHHhcc
Q psy18021 165 LHENSGGILKQIVLFESGSHNDTWKC-S-GYYHTISQFLAKAND 206 (230)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~H~~~~~~-~-~~~~~i~~fl~~~~~ 206 (230)
+++.+...+++++++++++|....+. + ++++.|.+||...+.
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 99998765689999999999987763 3 499999999998764
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=4.8e-22 Score=156.44 Aligned_cols=190 Identities=16% Similarity=0.164 Sum_probs=132.7
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC--------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-------- 78 (230)
++..+...||..+.+..+.+... +++||++||++++.. .+..++..+.+.||+|+++|+||||.|.
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~-----~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHH-----DRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCC-----CcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 56677778899998877765422 568999999998844 4444555567789999999999999873
Q ss_pred ------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH-----HHHH---H
Q psy18021 79 ------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP-----DMAL---I 114 (230)
Q Consensus 79 ------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~-----~~~~---~ 114 (230)
||.+++.++..+ |++++++|+.+|..... .... .
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~--p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 182 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH--PGVFDAIALCAPMFGIVLPLPSWMARRILN 182 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC--CCCcceEEEECchhccCCCCCcHHHHHHHH
Confidence 999999999888 89999999999864311 0000 0
Q ss_pred hhh---------------hhhccccccc--------------ccccCc-------------------ccHHhhhcCCCCE
Q psy18021 115 LLK---------------WNVLRKMPLF--------------CFKNKF-------------------LSHWKIERVSNPT 146 (230)
Q Consensus 115 ~~~---------------~~~~~~~~~~--------------~~~~~~-------------------~~~~~~~~i~~Pv 146 (230)
... +........+ ...+.. .....+.++++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 262 (330)
T PRK10749 183 WAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPL 262 (330)
T ss_pred HHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCE
Confidence 000 0000000000 000000 0023356789999
Q ss_pred EEEEecCCcccChHHHHHHHHHhCC-----CcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHHh
Q psy18021 147 FFIVGLNDHLVPPSMMVKLHENSGG-----ILKQIVLFESGSHNDTWKCS----GYYHTISQFLAKA 204 (230)
Q Consensus 147 l~i~g~~D~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~ 204 (230)
|+++|++|.+++++.++.+++.++. .+++++++++++|..+.+.+ ++++.|.+||++.
T Consensus 263 Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 263 LLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999999999989887742 34689999999999998775 3778888998763
No 10
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.89 E-value=2.8e-21 Score=148.95 Aligned_cols=194 Identities=20% Similarity=0.257 Sum_probs=143.7
Q ss_pred CceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCC--C----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKS--Q---- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s--~---- 78 (230)
...+-.+...||..+.+..+.+.... +.+||++||.+.+... +..++..|..+||.|+++|+||||.| .
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~----~g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPP----KGVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCC----CcEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC
Confidence 34667788889999998888777653 4699999999999554 45566667888999999999999999 3
Q ss_pred ----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH--HHH--Hhhhhh-
Q psy18021 79 ----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD--MAL--ILLKWN- 119 (230)
Q Consensus 79 ----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~--~~~--~~~~~~- 119 (230)
||.+++.++..+ +.+++++|+.+|...... ... ......
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~--~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY--PPRIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC--CccccEEEEECccccCChhHHHHHHHHHhccc
Confidence 999999999999 789999999999877652 111 100000
Q ss_pred hccccc--------------ccccccC----------c--------------------ccHHhhhcCCCCEEEEEecCCc
Q psy18021 120 VLRKMP--------------LFCFKNK----------F--------------------LSHWKIERVSNPTFFIVGLNDH 155 (230)
Q Consensus 120 ~~~~~~--------------~~~~~~~----------~--------------------~~~~~~~~i~~Pvl~i~g~~D~ 155 (230)
..+..+ .+..++. . .......++++|+|+++|++|.
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~ 240 (298)
T COG2267 161 LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDR 240 (298)
T ss_pred ccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCc
Confidence 000111 1111100 0 0112234568999999999999
Q ss_pred ccC-hHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHHhc
Q psy18021 156 LVP-PSMMVKLHENSGGILKQIVLFESGSHNDTWKCS----GYYHTISQFLAKAN 205 (230)
Q Consensus 156 ~v~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~~ 205 (230)
+++ .+...++++++..+++++.+++|+.|..+.+.+ ++++.+.+|+.+..
T Consensus 241 vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 241 VVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 999 799999999999888899999999999998776 37788888887754
No 11
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=4.6e-21 Score=154.32 Aligned_cols=194 Identities=12% Similarity=0.031 Sum_probs=134.8
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--- 78 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--- 78 (230)
++.+.+++.|+..||..+.+++..|.... + .|+||++||+.+.....+..+++.|+++||+|+++|+||+|.|.
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~--~-~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDG--P-FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCC--C-ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 35568899999998888999887665321 1 67888888877764455666777788999999999999999885
Q ss_pred ----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCH----HHHHHHhhh--h
Q psy18021 79 ----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSI----PDMALILLK--W 118 (230)
Q Consensus 79 ----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~----~~~~~~~~~--~ 118 (230)
||.+++.+|... |++++++|++++.... ......... .
T Consensus 241 ~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~--p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~ 318 (414)
T PRK05077 241 LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE--PPRLKAVACLGPVVHTLLTDPKRQQQVPEMYL 318 (414)
T ss_pred ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC--CcCceEEEEECCccchhhcchhhhhhchHHHH
Confidence 999999999887 7899999999886531 000000000 0
Q ss_pred ----hhccc--cc-ccccc--cCcc--cHHhh-hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCC
Q psy18021 119 ----NVLRK--MP-LFCFK--NKFL--SHWKI-ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHND 186 (230)
Q Consensus 119 ----~~~~~--~~-~~~~~--~~~~--~~~~~-~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 186 (230)
..+.. .. ..+.. ..+. ....+ .++++|+|+|+|++|.++|++.++.+.+..+ +.++++++++.
T Consensus 319 ~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~--~~~l~~i~~~~--- 393 (414)
T PRK05077 319 DVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA--DGKLLEIPFKP--- 393 (414)
T ss_pred HHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC--CCeEEEccCCC---
Confidence 00000 00 00000 0111 11112 5689999999999999999999998887766 58999999862
Q ss_pred cCCCC-cHHHHHHHHHHHhc
Q psy18021 187 TWKCS-GYYHTISQFLAKAN 205 (230)
Q Consensus 187 ~~~~~-~~~~~i~~fl~~~~ 205 (230)
..+.+ ++.+.|.+||.+.+
T Consensus 394 ~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 394 VYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred ccCCHHHHHHHHHHHHHHHh
Confidence 33444 58899999998764
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.88 E-value=2.1e-21 Score=149.31 Aligned_cols=179 Identities=18% Similarity=0.213 Sum_probs=126.6
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------- 78 (230)
+|.++.++.....+. .++|||+||++++...| ..+.+.|.+ +|+|+++|+||||.|.
T Consensus 10 ~~~~~~~~~~~~~~~-----~~plvllHG~~~~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 10 DGQSIRTAVRPGKEG-----LTPLLIFNGIGANLELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred CCcEEEEEEecCCCC-----CCcEEEEeCCCcchHHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 677887666533221 45799999999996544 444555655 6999999999999985
Q ss_pred ------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH------HHHHHhhh-hh---------h-ccc
Q psy18021 79 ------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP------DMALILLK-WN---------V-LRK 123 (230)
Q Consensus 79 ------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~------~~~~~~~~-~~---------~-~~~ 123 (230)
||.+++.+|..+ |++++++|++++..... ........ .. . ...
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDY--PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDI 160 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHC--HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhh
Confidence 999999999998 89999999998754210 00000000 00 0 000
Q ss_pred c-------ccc-------ccc-------------cCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceE
Q psy18021 124 M-------PLF-------CFK-------------NKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQI 176 (230)
Q Consensus 124 ~-------~~~-------~~~-------------~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~ 176 (230)
. +.. ... ..++....+.++++|+|+++|++|.++|++.++++.+.++ +.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~--~~~~ 238 (276)
T TIGR02240 161 YGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP--NAEL 238 (276)
T ss_pred ccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC--CCEE
Confidence 0 000 000 0011234578899999999999999999999999998887 4788
Q ss_pred EEeCCCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 177 VLFESGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 177 ~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
+++++ ||+.+.+.++ +++.|.+|+++.-
T Consensus 239 ~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 239 HIIDD-GHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred EEEcC-CCchhhccHHHHHHHHHHHHHHhh
Confidence 88985 9999998884 9999999998754
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=2.7e-21 Score=150.62 Aligned_cols=191 Identities=15% Similarity=0.174 Sum_probs=125.5
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
...+.+...||......+....... .|+|||+||++++.. .|..+...|.+.||+|+++|+||||.|.
T Consensus 21 ~~~~~~~~~~~~~~~i~y~~~G~~~----~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYVDEGPAD----GPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred ceeEeecCCCCceEEEEEEecCCCC----CCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 3445555444554443344332211 568999999998844 4556666677779999999999999885
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH-----HHHHHhhh-------
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP-----DMALILLK------- 117 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~-----~~~~~~~~------- 117 (230)
||.+++.++..+ |.++.++|++++..... .....+..
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH--PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPV 173 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC--hhheeEEEEeCCCCCCccccchHHHhhhhcccccCch
Confidence 999999999988 89999999988632110 00000000
Q ss_pred --------hhhccccc-----cc---------------c---cc-cC----c----ccHHhhhcCCCCEEEEEecCCccc
Q psy18021 118 --------WNVLRKMP-----LF---------------C---FK-NK----F----LSHWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 118 --------~~~~~~~~-----~~---------------~---~~-~~----~----~~~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
........ .+ . .. .. . .....+.++++|+++|+|++|.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 253 (302)
T PRK00870 174 LPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPIT 253 (302)
T ss_pred hhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcc
Confidence 00000000 00 0 00 00 0 012346788999999999999999
Q ss_pred ChHHHHHHHHHhCCC-cceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 158 PPSMMVKLHENSGGI-LKQIVLFESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
|... +++.+.+++. ...+.+++++||+...+.++ +.+.|.+|++++
T Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 254 GGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 9866 7787777742 12478999999999998885 889999999763
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.88 E-value=5e-21 Score=147.62 Aligned_cols=163 Identities=20% Similarity=0.286 Sum_probs=116.4
Q ss_pred CcEEEEEcCCCCCchhhH---HHHHHhhccCCceEEEEeccCCcCCC---------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRL---HNVAGLHSMLKCNVLMVEYRGYGKSQ--------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~---~~~~~~~~~~g~~vi~~d~rG~G~s~--------------------------------- 78 (230)
.|+||++||++.+...|. ..+. .+.+.||+|+++|+||||.|.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~-~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~ 108 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIG-PFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVGN 108 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHH-HHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEEE
Confidence 467999999988754332 2233 345669999999999999996
Q ss_pred --cHHHHHHHHhCCCCccccceEEEecCCCCH---------H---HHHHH-----------hhhhhhc-c-cc-------
Q psy18021 79 --GGAVAIDLLARPEYASKIWCLIVENTFTSI---------P---DMALI-----------LLKWNVL-R-KM------- 124 (230)
Q Consensus 79 --Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~---------~---~~~~~-----------~~~~~~~-~-~~------- 124 (230)
||.+++.++..+ |++++++|++++.... . ..... ....... . ..
T Consensus 109 S~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (282)
T TIGR03343 109 SMGGATALNFALEY--PDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQG 186 (282)
T ss_pred CchHHHHHHHHHhC--hHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHh
Confidence 999999999988 8999999998763210 0 00000 0000000 0 00
Q ss_pred --------cc----ccc------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCC
Q psy18021 125 --------PL----FCF------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHND 186 (230)
Q Consensus 125 --------~~----~~~------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 186 (230)
+. +.. ...++....++++++|+|+++|++|.+++++.++++.+.++ +.++++++++||+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~--~~~~~~i~~agH~~ 264 (282)
T TIGR03343 187 RWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP--DAQLHVFSRCGHWA 264 (282)
T ss_pred HHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC--CCEEEEeCCCCcCC
Confidence 00 000 00122344578899999999999999999999999998887 58999999999999
Q ss_pred cCCCCc-HHHHHHHHHH
Q psy18021 187 TWKCSG-YYHTISQFLA 202 (230)
Q Consensus 187 ~~~~~~-~~~~i~~fl~ 202 (230)
..+.++ +.+.|.+||+
T Consensus 265 ~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 265 QWEHADAFNRLVIDFLR 281 (282)
T ss_pred cccCHHHHHHHHHHHhh
Confidence 999985 8899999986
No 15
>PLN02511 hydrolase
Probab=99.87 E-value=1.3e-20 Score=150.98 Aligned_cols=204 Identities=15% Similarity=0.155 Sum_probs=134.2
Q ss_pred CCceeEEEEccCCCEEEEEEecCCC-cccCCCCcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCCC---
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIPQPD-VKAKCETMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKSQ--- 78 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~~~~-~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s~--- 78 (230)
+.+++..+.+.||..+...+..... ..+.. +|+||++||++++... +...+...+.+.||+|+++|+||||.|.
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~-~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPAD-APVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCC-CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 4567778999999888765543221 11122 7899999999876443 4444545556779999999999999885
Q ss_pred -----------------------------------cHHHHHHHHhCCCCccc--cceEEEecCCCCHHH-----------
Q psy18021 79 -----------------------------------GGAVAIDLLARPEYASK--IWCLIVENTFTSIPD----------- 110 (230)
Q Consensus 79 -----------------------------------Gg~~a~~~a~~~~~~~~--i~~~i~~~~~~~~~~----------- 110 (230)
||.+++.++... +++ +.+++++++......
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~--~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~ 225 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEE--GENCPLSGAVSLCNPFDLVIADEDFHKGFNN 225 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhc--CCCCCceEEEEECCCcCHHHHHHHHhccHHH
Confidence 999999999887 555 788887766443210
Q ss_pred H----HH-Hh---hh--hhhcccccc---------------c---ccc--c----------CcccHHhhhcCCCCEEEEE
Q psy18021 111 M----AL-IL---LK--WNVLRKMPL---------------F---CFK--N----------KFLSHWKIERVSNPTFFIV 150 (230)
Q Consensus 111 ~----~~-~~---~~--~~~~~~~~~---------------~---~~~--~----------~~~~~~~~~~i~~Pvl~i~ 150 (230)
. +. .. .. ...+..++. + +.. . ..+....+.+|++|+|+|+
T Consensus 226 ~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~ 305 (388)
T PLN02511 226 VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQ 305 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEE
Confidence 0 00 00 00 000000000 0 000 0 1122456788999999999
Q ss_pred ecCCcccChHHH-HHHHHHhCCCcceEEEeCCCCCCCcCCCCc-------HHHHHHHHHHHhcccCCCCC
Q psy18021 151 GLNDHLVPPSMM-VKLHENSGGILKQIVLFESGSHNDTWKCSG-------YYHTISQFLAKANDFLPTPP 212 (230)
Q Consensus 151 g~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-------~~~~i~~fl~~~~~~~~~~~ 212 (230)
|++|.++|.+.. ....+..+ +.++++++++||..+.+.++ +.+.+.+||+...+...+.+
T Consensus 306 g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~~~~~ 373 (388)
T PLN02511 306 AANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGKSSTP 373 (388)
T ss_pred cCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhccccc
Confidence 999999997654 33444444 68999999999999988774 36889999998886554443
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.87 E-value=3.5e-21 Score=145.98 Aligned_cols=162 Identities=19% Similarity=0.288 Sum_probs=116.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------------c
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------------G 79 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------------G 79 (230)
.|+||++||++++...| ......+.+ +|+|+++|+||||.|. |
T Consensus 13 ~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~G 90 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYW-APQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALG 90 (257)
T ss_pred CCEEEEEcCCCcchhHH-HHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence 67899999999995544 444555554 7999999999999885 9
Q ss_pred HHHHHHHHhCCCCccccceEEEecCCCCHHHH----HHH---hhh-h---------hhccccccccc-------------
Q psy18021 80 GAVAIDLLARPEYASKIWCLIVENTFTSIPDM----ALI---LLK-W---------NVLRKMPLFCF------------- 129 (230)
Q Consensus 80 g~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~----~~~---~~~-~---------~~~~~~~~~~~------------- 129 (230)
|.+++.++... |++++++|+++++...... ... ... . ........|..
T Consensus 91 g~~a~~~a~~~--~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (257)
T TIGR03611 91 GLIGLQLALRY--PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHA 168 (257)
T ss_pred HHHHHHHHHHC--hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhc
Confidence 99999999987 7899999998875432110 000 000 0 00000000000
Q ss_pred ----------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-
Q psy18021 130 ----------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG- 192 (230)
Q Consensus 130 ----------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~- 192 (230)
...++....+.++++|+++++|++|.++|++.++++++.++ +.+++.++++||....+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~ 246 (257)
T TIGR03611 169 LAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP--NAQLKLLPYGGHASNVTDPET 246 (257)
T ss_pred ccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC--CceEEEECCCCCCccccCHHH
Confidence 00122345567889999999999999999999999998877 47889999999999888875
Q ss_pred HHHHHHHHHH
Q psy18021 193 YYHTISQFLA 202 (230)
Q Consensus 193 ~~~~i~~fl~ 202 (230)
+.+.|.+||+
T Consensus 247 ~~~~i~~fl~ 256 (257)
T TIGR03611 247 FNRALLDFLK 256 (257)
T ss_pred HHHHHHHHhc
Confidence 8899999985
No 17
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=159.13 Aligned_cols=199 Identities=16% Similarity=0.125 Sum_probs=146.9
Q ss_pred CceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
+.|.+++++.||.++.+|++.|.+..++++.|+||++||++.... ..+....+.|+.+||.|+.+|+||.+...
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 468899999999999999999887665433699999999986542 23444555688999999999999865532
Q ss_pred ---------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhh---
Q psy18021 79 ---------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILL--- 116 (230)
Q Consensus 79 ---------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~--- 116 (230)
||.+++.++... + ++++.+...+..+...+.....
T Consensus 444 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~--~-~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKT--P-RFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred hhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcC--c-hhheEEeccCcchhhhhccccchhh
Confidence 999999999998 4 7888888777555433321111
Q ss_pred --hhhhcccccc--cccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCC
Q psy18021 117 --KWNVLRKMPL--FCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKC 190 (230)
Q Consensus 117 --~~~~~~~~~~--~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~ 190 (230)
........+. .......++.....++++|+|+|||++|..||.+++++++++++. .+++++++|+.+|......
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~ 600 (620)
T COG1506 521 RFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPE 600 (620)
T ss_pred cCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCch
Confidence 0000001000 001123456777889999999999999999999999999998874 3689999999999888744
Q ss_pred C--cHHHHHHHHHHHhcc
Q psy18021 191 S--GYYHTISQFLAKAND 206 (230)
Q Consensus 191 ~--~~~~~i~~fl~~~~~ 206 (230)
. +..+.+.+|+++.+.
T Consensus 601 ~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 601 NRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 3 377889999998764
No 18
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=4.8e-21 Score=135.70 Aligned_cols=163 Identities=15% Similarity=0.176 Sum_probs=122.7
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
+.+||++||++|+ ..-...+++.|.++||+|.+|.|||||...
T Consensus 15 ~~AVLllHGFTGt-~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGT-PRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCC-cHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 4589999999999 445677788899999999999999999988
Q ss_pred -cHHHHHHHHhCCCCccccceEEEecCCCCHHH-------HHHHhhhhhhccccc-ccc------ccc------------
Q psy18021 79 -GGAVAIDLLARPEYASKIWCLIVENTFTSIPD-------MALILLKWNVLRKMP-LFC------FKN------------ 131 (230)
Q Consensus 79 -Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~------~~~------------ 131 (230)
||-+++.+|..+ .++++|..|+...... ........+...... ... ..+
T Consensus 94 mGGv~alkla~~~----p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~ 169 (243)
T COG1647 94 MGGVFALKLAYHY----PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKL 169 (243)
T ss_pred chhHHHHHHHhhC----CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 999999999999 3899998888655211 111110000000000 000 000
Q ss_pred CcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC--cHHHHHHHHHH
Q psy18021 132 KFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS--GYYHTISQFLA 202 (230)
Q Consensus 132 ~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~ 202 (230)
.-+....+..|..|+++++|.+|+.+|.+.+..+++...+.++++.+++++||....+.. ++.+.|..||+
T Consensus 170 i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 170 IKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 011244567789999999999999999999999999999888999999999999987765 48899999986
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=9e-20 Score=141.59 Aligned_cols=179 Identities=16% Similarity=0.174 Sum_probs=120.8
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------- 78 (230)
+|.++.+.... . .|+|||+||++++.. .|..+.+.|.+.+ +|+++|+||||.|+
T Consensus 15 ~g~~i~y~~~G--~------g~~vvllHG~~~~~~-~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~ 84 (295)
T PRK03592 15 LGSRMAYIETG--E------GDPIVFLHGNPTSSY-LWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLD 84 (295)
T ss_pred CCEEEEEEEeC--C------CCEEEEECCCCCCHH-HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 67777654332 1 458999999999854 4455566677755 99999999999996
Q ss_pred ------------------cHHHHHHHHhCCCCccccceEEEecCCCCH------HH----HHHHhhhhh-----------
Q psy18021 79 ------------------GGAVAIDLLARPEYASKIWCLIVENTFTSI------PD----MALILLKWN----------- 119 (230)
Q Consensus 79 ------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~------~~----~~~~~~~~~----------- 119 (230)
||.+++.++..+ |++++++|++++.... .. .........
T Consensus 85 ~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
T PRK03592 85 AWFDALGLDDVVLVGHDWGSALGFDWAARH--PDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENV 162 (295)
T ss_pred HHHHHhCCCCeEEEEECHHHHHHHHHHHhC--hhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhh
Confidence 999999999998 9999999999874221 00 011000000
Q ss_pred -hccccccccc-----------c----c-----------------Cc---------ccHHhhhcCCCCEEEEEecCCccc
Q psy18021 120 -VLRKMPLFCF-----------K----N-----------------KF---------LSHWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 120 -~~~~~~~~~~-----------~----~-----------------~~---------~~~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
.......... . + .. +....+.++++|+|+|+|++|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 242 (295)
T PRK03592 163 FIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAIL 242 (295)
T ss_pred HHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCccc
Confidence 0000000000 0 0 00 001235678999999999999999
Q ss_pred ChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhcc
Q psy18021 158 PPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKAND 206 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~~ 206 (230)
++....++...... +.++.+++++||+.+.+.++ +.+.|.+|+++...
T Consensus 243 ~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 243 TTGAIRDWCRSWPN-QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CcHHHHHHHHHhhh-hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 66555555544332 58999999999999999885 88999999987653
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=3.4e-20 Score=141.12 Aligned_cols=162 Identities=19% Similarity=0.233 Sum_probs=115.7
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------cHHHHHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------GGAVAID 85 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------Gg~~a~~ 85 (230)
.|+|||+||++++...|. .+...|.+ .|+|+++|+||||.|. ||.+++.
T Consensus 13 ~~~ivllHG~~~~~~~w~-~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~~~~~~~~lvGhS~Gg~ia~~ 90 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWR-CIDEELSS-HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQ 90 (256)
T ss_pred CCeEEEECCCCCChhHHH-HHHHHHhc-CCEEEEecCCCCCCCCCCCCCCHHHHHHHHHhcCCCCeEEEEECHHHHHHHH
Confidence 357999999999965554 45556665 5999999999999886 9999999
Q ss_pred HHhCCCCccccceEEEecCCCCH---------H-HH-------H--------HHhhhhhhcccc--c----cc----cc-
Q psy18021 86 LLARPEYASKIWCLIVENTFTSI---------P-DM-------A--------LILLKWNVLRKM--P----LF----CF- 129 (230)
Q Consensus 86 ~a~~~~~~~~i~~~i~~~~~~~~---------~-~~-------~--------~~~~~~~~~~~~--~----~~----~~- 129 (230)
+|... |.+++++|++++.... . .. . ..+......... . .+ ..
T Consensus 91 ~a~~~--p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (256)
T PRK10349 91 IALTH--PERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLAL 168 (256)
T ss_pred HHHhC--hHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhcc
Confidence 99988 9999999998763110 0 00 0 000000000000 0 00 00
Q ss_pred --------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HH
Q psy18021 130 --------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YY 194 (230)
Q Consensus 130 --------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~ 194 (230)
....+....+.++++|+|+++|++|.++|.+.++.+.+.++ +.++.+++++||+...+.|+ +.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~--~~~~~~i~~~gH~~~~e~p~~f~ 246 (256)
T PRK10349 169 PMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFISHPAEFC 246 (256)
T ss_pred CCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHHHH
Confidence 01123445678899999999999999999998888888877 58999999999999999985 88
Q ss_pred HHHHHHHH
Q psy18021 195 HTISQFLA 202 (230)
Q Consensus 195 ~~i~~fl~ 202 (230)
+.+.+|-.
T Consensus 247 ~~l~~~~~ 254 (256)
T PRK10349 247 HLLVALKQ 254 (256)
T ss_pred HHHHHHhc
Confidence 88887754
No 21
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.85 E-value=1.6e-19 Score=146.48 Aligned_cols=182 Identities=12% Similarity=0.143 Sum_probs=122.8
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhc---cCCceEEEEeccCCcCCC-------------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHS---MLKCNVLMVEYRGYGKSQ------------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~---~~g~~vi~~d~rG~G~s~------------- 78 (230)
.+.++++....+...+. +|+|||+||++++...|...+...+. +.+|+|+++|+||||.|+
T Consensus 184 ~~~~l~~~~~gp~~~~~---k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a 260 (481)
T PLN03087 184 SNESLFVHVQQPKDNKA---KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHL 260 (481)
T ss_pred CCeEEEEEEecCCCCCC---CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHH
Confidence 34678766665544221 56899999999996555443333333 468999999999999876
Q ss_pred -----------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH--------HHHHH-------------
Q psy18021 79 -----------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP--------DMALI------------- 114 (230)
Q Consensus 79 -----------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~--------~~~~~------------- 114 (230)
||.+++.++..+ |++++++|++++..... .....
T Consensus 261 ~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~--Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (481)
T PLN03087 261 EMIERSVLERYKVKSFHIVAHSLGCILALALAVKH--PGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFG 338 (481)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhC--hHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccc
Confidence 999999999988 99999999998632100 00000
Q ss_pred -----hhh---hh----------hccc---------cccccc--------ccCc---------------ccH-HhhhcCC
Q psy18021 115 -----LLK---WN----------VLRK---------MPLFCF--------KNKF---------------LSH-WKIERVS 143 (230)
Q Consensus 115 -----~~~---~~----------~~~~---------~~~~~~--------~~~~---------------~~~-~~~~~i~ 143 (230)
++. .. .+.. ...... ...+ +.. ....+++
T Consensus 339 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~ 418 (481)
T PLN03087 339 ASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLK 418 (481)
T ss_pred hhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCC
Confidence 000 00 0000 000000 0000 001 1122689
Q ss_pred CCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcC-CCC-cHHHHHHHHHHH
Q psy18021 144 NPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTW-KCS-GYYHTISQFLAK 203 (230)
Q Consensus 144 ~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~-~~~~~i~~fl~~ 203 (230)
+|+|+++|++|.++|++.++.+.+.++ +.++++++++||..+. +.+ ++++.|.+|...
T Consensus 419 vPtLII~Ge~D~ivP~~~~~~la~~iP--~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 419 CDVAIFHGGDDELIPVECSYAVKAKVP--RARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHhCC--CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 999999999999999999999999987 5899999999999885 666 488999998854
No 22
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=7.2e-20 Score=142.09 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+|||+||++++...|. .+...|.++ |+|+++|+||||.|.
T Consensus 29 ~~~vlllHG~~~~~~~w~-~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~l 106 (294)
T PLN02824 29 GPALVLVHGFGGNADHWR-KNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFV 106 (294)
T ss_pred CCeEEEECCCCCChhHHH-HHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEE
Confidence 458999999999965444 445566664 799999999999873
Q ss_pred -----cHHHHHHHHhCCCCccccceEEEecCCCCH----------HHH---HHHhh----------hh--------hh--
Q psy18021 79 -----GGAVAIDLLARPEYASKIWCLIVENTFTSI----------PDM---ALILL----------KW--------NV-- 120 (230)
Q Consensus 79 -----Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~----------~~~---~~~~~----------~~--------~~-- 120 (230)
||.+++.++..+ |++++++|++++.... ... ..... .. ..
T Consensus 107 vGhS~Gg~va~~~a~~~--p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (294)
T PLN02824 107 ICNSVGGVVGLQAAVDA--PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILC 184 (294)
T ss_pred EEeCHHHHHHHHHHHhC--hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHH
Confidence 999999999998 9999999998864310 000 00000 00 00
Q ss_pred --cc---ccc-cc--------------------cc-ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCc
Q psy18021 121 --LR---KMP-LF--------------------CF-KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGIL 173 (230)
Q Consensus 121 --~~---~~~-~~--------------------~~-~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~ 173 (230)
+. ... .. .. .........+.++++|+|+|+|++|.+++.+.++.+.+..+ +
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~ 262 (294)
T PLN02824 185 QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA--V 262 (294)
T ss_pred HhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC--c
Confidence 00 000 00 00 00001234578899999999999999999998888666544 4
Q ss_pred ceEEEeCCCCCCCcCCCCc-HHHHHHHHHHH
Q psy18021 174 KQIVLFESGSHNDTWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 174 ~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~ 203 (230)
.++++++++||+...+.++ +.+.|.+|+++
T Consensus 263 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 263 EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 7899999999999999985 88999999975
No 23
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=1.6e-19 Score=143.70 Aligned_cols=164 Identities=17% Similarity=0.197 Sum_probs=111.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------------c
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------------G 79 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------------G 79 (230)
.|+|||+||++++...|...+ ..|.+ +|+|+++|+||||.|. |
T Consensus 88 gp~lvllHG~~~~~~~w~~~~-~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~G 165 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNI-GVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVG 165 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHH-HHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHH
Confidence 478999999999965555544 45665 7999999999999885 8
Q ss_pred HHHHHHHHh-CCCCccccceEEEecCCCCH------HHH-H----------HH----------hhhh----hhc------
Q psy18021 80 GAVAIDLLA-RPEYASKIWCLIVENTFTSI------PDM-A----------LI----------LLKW----NVL------ 121 (230)
Q Consensus 80 g~~a~~~a~-~~~~~~~i~~~i~~~~~~~~------~~~-~----------~~----------~~~~----~~~------ 121 (230)
|.+++.++. .+ |++++++|++++.... ... . .. .+.. ...
T Consensus 166 g~ia~~~a~~~~--P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (360)
T PLN02679 166 SLACVIAASEST--RDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLS 243 (360)
T ss_pred HHHHHHHHHhcC--hhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHH
Confidence 999988776 45 7899999998864211 000 0 00 0000 000
Q ss_pred --cc---cc-cc---c----------------cc--cCcccHHhhhcCCCCEEEEEecCCcccChHHH-----HHHHHHh
Q psy18021 122 --RK---MP-LF---C----------------FK--NKFLSHWKIERVSNPTFFIVGLNDHLVPPSMM-----VKLHENS 169 (230)
Q Consensus 122 --~~---~~-~~---~----------------~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~-----~~~~~~~ 169 (230)
.. .. .+ . .. ...+....+.++++|+|+++|++|.++|++.. .++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i 323 (360)
T PLN02679 244 VYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL 323 (360)
T ss_pred hccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC
Confidence 00 00 00 0 00 01122345778899999999999999988632 2333444
Q ss_pred CCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 170 GGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 170 ~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
+ +.++++++++||+.+.+.|+ +.+.|.+||++.
T Consensus 324 p--~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 324 P--NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred C--ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 4 58999999999999999985 889999999864
No 24
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=2.2e-19 Score=138.20 Aligned_cols=163 Identities=23% Similarity=0.328 Sum_probs=116.6
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
+++|||+||++++...++..+...+.+.||.|+++|+||+|.|.
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S 104 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHS 104 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 56899999987776667777777777779999999999999875
Q ss_pred -cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHH------hhh---------hh------------hc-ccc-----
Q psy18021 79 -GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALI------LLK---------WN------------VL-RKM----- 124 (230)
Q Consensus 79 -Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~------~~~---------~~------------~~-~~~----- 124 (230)
||.+++.++..+ |.+++++|+.++.......... ... .. .. ...
T Consensus 105 ~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
T TIGR01250 105 WGGMLAQEYALKY--GQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLC 182 (288)
T ss_pred hHHHHHHHHHHhC--ccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhc
Confidence 999999999988 8999999998875432111000 000 00 00 000
Q ss_pred -----cccc-------c------------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcc
Q psy18021 125 -----PLFC-------F------------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILK 174 (230)
Q Consensus 125 -----~~~~-------~------------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~ 174 (230)
+... . ...++....+.++++|+++++|++|.+ +++.++.+.+.++ +.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~--~~ 259 (288)
T TIGR01250 183 RTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA--GS 259 (288)
T ss_pred ccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc--CC
Confidence 0000 0 001223456778899999999999985 6677888877776 47
Q ss_pred eEEEeCCCCCCCcCCCCc-HHHHHHHHHH
Q psy18021 175 QIVLFESGSHNDTWKCSG-YYHTISQFLA 202 (230)
Q Consensus 175 ~~~~~~~~~H~~~~~~~~-~~~~i~~fl~ 202 (230)
++++++++||+.+.+.++ +.+.|.+||+
T Consensus 260 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 260 RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 899999999999998874 8888988873
No 25
>PLN02965 Probable pheophorbidase
Probab=99.84 E-value=9.8e-20 Score=138.51 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=116.7
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------cH
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------GG 80 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------Gg 80 (230)
+|||+||++.+... |..+...|++.||+|+++|+||||.|. ||
T Consensus 5 ~vvllHG~~~~~~~-w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWC-WYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCc-HHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 69999999988544 555555677779999999999999885 99
Q ss_pred HHHHHHHhCCCCccccceEEEecCCCC-----HHHHHHH-hh----hhhh-----c--c---------cccccccc----
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENTFTS-----IPDMALI-LL----KWNV-----L--R---------KMPLFCFK---- 130 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~~~~-----~~~~~~~-~~----~~~~-----~--~---------~~~~~~~~---- 130 (230)
.+++.++..+ |++|+++|++++... ....... .. .+.. . . ........
T Consensus 84 ~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PLN02965 84 GSVTEALCKF--TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL 161 (255)
T ss_pred HHHHHHHHhC--chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH
Confidence 9999999988 999999999887521 0111100 00 0000 0 0 00000000
Q ss_pred ------------cCcc-------cHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC
Q psy18021 131 ------------NKFL-------SHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS 191 (230)
Q Consensus 131 ------------~~~~-------~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 191 (230)
.... ....+..+++|+++++|++|.++|++..+.+.+.++ +.++++++++||+.+.+.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~--~a~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP--PAQTYVLEDSDHSAFFSVP 239 (255)
T ss_pred HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC--cceEEEecCCCCchhhcCH
Confidence 0000 011334689999999999999999999999999888 4789999999999999999
Q ss_pred c-HHHHHHHHHHHh
Q psy18021 192 G-YYHTISQFLAKA 204 (230)
Q Consensus 192 ~-~~~~i~~fl~~~ 204 (230)
+ +.+.|.+|++..
T Consensus 240 ~~v~~~l~~~~~~~ 253 (255)
T PLN02965 240 TTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHHHh
Confidence 5 999999998764
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.84 E-value=3.5e-20 Score=139.29 Aligned_cols=161 Identities=19% Similarity=0.293 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------cHHHHHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------GGAVAID 85 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------Gg~~a~~ 85 (230)
+|+|||+||++++.. .+..+...|.+ +|+|+++|+||+|.|. ||.+++.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~ 81 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQAPDPAIWLGWSLGGLVALH 81 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhCCCCeEEEEEcHHHHHHHH
Confidence 478999999999855 44555566665 7999999999999986 9999999
Q ss_pred HHhCCCCccccceEEEecCCCCH------H-----HHHHH---------------hhhhhhccc--ccc----c---cc-
Q psy18021 86 LLARPEYASKIWCLIVENTFTSI------P-----DMALI---------------LLKWNVLRK--MPL----F---CF- 129 (230)
Q Consensus 86 ~a~~~~~~~~i~~~i~~~~~~~~------~-----~~~~~---------------~~~~~~~~~--~~~----~---~~- 129 (230)
++..+ |+++.++|++++.... . ..... +........ ... + ..
T Consensus 82 ~a~~~--p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (245)
T TIGR01738 82 IAATH--PDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLA 159 (245)
T ss_pred HHHHC--HHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhc
Confidence 99988 8899999988664211 0 00000 000000000 000 0 00
Q ss_pred ---------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-H
Q psy18021 130 ---------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-Y 193 (230)
Q Consensus 130 ---------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~ 193 (230)
....+....+.++++|+++++|++|.++|++..+.+.+.++ +.++++++++||+.+.+.++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~ 237 (245)
T TIGR01738 160 RPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIFAKAAHAPFLSHAEAF 237 (245)
T ss_pred cCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHHH
Confidence 00112234567899999999999999999999888888877 58999999999999999885 8
Q ss_pred HHHHHHHH
Q psy18021 194 YHTISQFL 201 (230)
Q Consensus 194 ~~~i~~fl 201 (230)
.+.|.+||
T Consensus 238 ~~~i~~fi 245 (245)
T TIGR01738 238 CALLVAFK 245 (245)
T ss_pred HHHHHhhC
Confidence 88888885
No 27
>KOG4178|consensus
Probab=99.84 E-value=1.2e-19 Score=136.78 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=124.9
Q ss_pred EEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------
Q psy18021 9 IFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------- 78 (230)
Q Consensus 9 ~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------- 78 (230)
..+.+-+|..+. +....... .|+|+++||++..+-.|..++. .|+.+||+|+++|+||+|.|+
T Consensus 24 hk~~~~~gI~~h--~~e~g~~~----gP~illlHGfPe~wyswr~q~~-~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 24 HKFVTYKGIRLH--YVEGGPGD----GPIVLLLHGFPESWYSWRHQIP-GLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred eeeEEEccEEEE--EEeecCCC----CCEEEEEccCCccchhhhhhhh-hhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 444455564443 44333222 7899999999999666666655 578889999999999999998
Q ss_pred --------------------------cHHHHHHHHhCCCCccccceEEEecCCCC-----HHHHHHH-------------
Q psy18021 79 --------------------------GGAVAIDLLARPEYASKIWCLIVENTFTS-----IPDMALI------------- 114 (230)
Q Consensus 79 --------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~-----~~~~~~~------------- 114 (230)
|+.+|..++..+ |++++++|+.+.... ..+....
T Consensus 97 ~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~--Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFY--PERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred HHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhC--hhhcceEEEecCCCCCcccchhhhhccccCccceeEeccc
Confidence 999999999999 999999998765322 0000000
Q ss_pred -------------------hhhhhh--cccc-------cccccc-----------------------c---Cc-ccHHhh
Q psy18021 115 -------------------LLKWNV--LRKM-------PLFCFK-----------------------N---KF-LSHWKI 139 (230)
Q Consensus 115 -------------------~~~~~~--~~~~-------~~~~~~-----------------------~---~~-~~~~~~ 139 (230)
...... .... +.|+.. + .+ .....+
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccc
Confidence 000000 0000 001100 0 01 113345
Q ss_pred hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 140 ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 140 ~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
.++++|+++++|++|.+.++....+.+++.-....+.++++++||+...++|+ +.+.|..|+++.
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 67899999999999999888744444444332224788899999999999995 999999999874
No 28
>KOG4409|consensus
Probab=99.84 E-value=1.1e-19 Score=137.36 Aligned_cols=192 Identities=19% Similarity=0.293 Sum_probs=128.4
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
..+++...+...++..+........... ++++||+||++.....|...+..+ ++ ..+|+++|++|+|+|+
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~~~~~~~~----~~plVliHGyGAg~g~f~~Nf~~L-a~-~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTITVSNESAN----KTPLVLIHGYGAGLGLFFRNFDDL-AK-IRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred CCCcceeeeecCCCceeEEEeecccccC----CCcEEEEeccchhHHHHHHhhhhh-hh-cCceEEecccCCCCCCCCCC
Confidence 3455555666666565544444433322 678999999999988788888764 44 7899999999999998
Q ss_pred ----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHH-------------
Q psy18021 79 ----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDM------------- 111 (230)
Q Consensus 79 ----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~------------- 111 (230)
||+++..+|..+ |++|+.+|+++|+.-..+.
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKy--PerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w 213 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKY--PERVEKLILVSPWGFPEKPDSEPEFTKPPPEW 213 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhC--hHhhceEEEecccccccCCCcchhhcCCChHH
Confidence 999999999999 9999999999995422110
Q ss_pred HHHhh-------hhhhcc-------------------cccccccc----------c-----------------Cc---cc
Q psy18021 112 ALILL-------KWNVLR-------------------KMPLFCFK----------N-----------------KF---LS 135 (230)
Q Consensus 112 ~~~~~-------~~~~~~-------------------~~~~~~~~----------~-----------------~~---~~ 135 (230)
..... +...++ .++..... + .+ ..
T Consensus 214 ~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm 293 (365)
T KOG4409|consen 214 YKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPM 293 (365)
T ss_pred HhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhH
Confidence 00000 000000 00000000 0 00 11
Q ss_pred HHhhhcCC--CCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHH
Q psy18021 136 HWKIERVS--NPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 136 ~~~~~~i~--~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~ 203 (230)
.+.+..++ +|+++|+|++|.+- .....++...+....++.+++|++||....++|+ |++.|..++++
T Consensus 294 ~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 294 IQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred HHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 33444454 99999999999764 4455555555444458999999999999999997 88888888765
No 29
>PRK10566 esterase; Provisional
Probab=99.83 E-value=2.9e-19 Score=135.45 Aligned_cols=163 Identities=16% Similarity=0.153 Sum_probs=108.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+||++||++++. ..+..++..|+++||.|+++|+||||.+.
T Consensus 27 ~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 27 LPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred CCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 68999999999884 44566777788899999999999998630
Q ss_pred -----------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcc------cccc-cccccCcccHHhhh
Q psy18021 79 -----------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLR------KMPL-FCFKNKFLSHWKIE 140 (230)
Q Consensus 79 -----------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~ 140 (230)
||.+++.++... | ++.+.+.+.+...........+...... .... +.....++....+.
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARH--P-WVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLE 182 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhC--C-CeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhh
Confidence 999999888876 4 4554443322111111111111000000 0000 00011233344566
Q ss_pred cC-CCCEEEEEecCCcccChHHHHHHHHHhCCC----cceEEEeCCCCCCCcCCCCcHHHHHHHHHHHh
Q psy18021 141 RV-SNPTFFIVGLNDHLVPPSMMVKLHENSGGI----LKQIVLFESGSHNDTWKCSGYYHTISQFLAKA 204 (230)
Q Consensus 141 ~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 204 (230)
++ ++|+|++||++|.++|++.++++++.++.. +.+++.+++++|... ++..+.+.+||++.
T Consensus 183 ~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~ 248 (249)
T PRK10566 183 QLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAFFRQH 248 (249)
T ss_pred hcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHHHHhh
Confidence 66 799999999999999999999999988653 357788999999753 46778899999875
No 30
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=2.2e-19 Score=143.06 Aligned_cols=165 Identities=19% Similarity=0.262 Sum_probs=114.3
Q ss_pred cEEEEEcCCCCCchhhH-HHHHHhh-------ccCCceEEEEeccCCcCCC-----------------------------
Q psy18021 36 MTLVYLHGNAGNIGHRL-HNVAGLH-------SMLKCNVLMVEYRGYGKSQ----------------------------- 78 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~-~~~~~~~-------~~~g~~vi~~d~rG~G~s~----------------------------- 78 (230)
|+|||+||++++...|+ ..+...+ ...+|+|+++|+||||.|.
T Consensus 70 pplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~ 149 (360)
T PRK06489 70 NAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEG 149 (360)
T ss_pred CeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 57999999999855554 2333322 2458999999999999772
Q ss_pred --------------cHHHHHHHHhCCCCccccceEEEecCCCC--------HHHHHHHhhh----h---h----------
Q psy18021 79 --------------GGAVAIDLLARPEYASKIWCLIVENTFTS--------IPDMALILLK----W---N---------- 119 (230)
Q Consensus 79 --------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~--------~~~~~~~~~~----~---~---------- 119 (230)
||.+|+.++..+ |++++++|++++... .......... + .
T Consensus 150 lgi~~~~~lvG~SmGG~vAl~~A~~~--P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
T PRK06489 150 LGVKHLRLILGTSMGGMHAWMWGEKY--PDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKR 227 (360)
T ss_pred cCCCceeEEEEECHHHHHHHHHHHhC--chhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 999999999998 999999999876421 0000000000 0 0
Q ss_pred ---hc-------------cccc-----ccc--------------------cccCcccHHhhhcCCCCEEEEEecCCcccC
Q psy18021 120 ---VL-------------RKMP-----LFC--------------------FKNKFLSHWKIERVSNPTFFIVGLNDHLVP 158 (230)
Q Consensus 120 ---~~-------------~~~~-----~~~--------------------~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~ 158 (230)
.. .... .+. ....++..+.+.+|++|+|+|+|++|.++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p 307 (360)
T PRK06489 228 ANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNP 307 (360)
T ss_pred HHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccC
Confidence 00 0000 000 000123345678899999999999999999
Q ss_pred hHHH--HHHHHHhCCCcceEEEeCCC----CCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 159 PSMM--VKLHENSGGILKQIVLFESG----SHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 159 ~~~~--~~~~~~~~~~~~~~~~~~~~----~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
++.+ +++.+.++ +.++++++++ ||..+ +.|+ +.+.|.+||+++.
T Consensus 308 ~~~~~~~~la~~ip--~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 308 PETGVMEAALKRVK--HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hhhHHHHHHHHhCc--CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 9875 77888877 5899999996 99987 6774 9999999998753
No 31
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.83 E-value=4.3e-19 Score=136.39 Aligned_cols=178 Identities=14% Similarity=0.156 Sum_probs=120.5
Q ss_pred ccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC--------------
Q psy18021 13 SLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-------------- 78 (230)
Q Consensus 13 ~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-------------- 78 (230)
..++.++.+....+.+ .|+|||+||++++...|. .+...+++ +|+|+++|+||||.|.
T Consensus 12 ~~~~~~~~~~~~g~~~------~~~vv~~hG~~~~~~~~~-~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 12 TVGPFHWHVQDMGPTA------GPLLLLLHGTGASTHSWR-DLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred eECCEEEEEEecCCCC------CCeEEEEcCCCCCHHHHH-HHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 3366776644332211 568999999999855544 44455655 6999999999999886
Q ss_pred ---------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH--------HHHHh----------hhh-
Q psy18021 79 ---------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD--------MALIL----------LKW- 118 (230)
Q Consensus 79 ---------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~--------~~~~~----------~~~- 118 (230)
||.+++.++... |.+++++|++++...... ..... ...
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~--p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDG--PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhC--CcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh
Confidence 999999999988 888999998876432100 00000 000
Q ss_pred ----hhcc-c-------cc----ccc---ccc------------Cc---ccHHhhhcCCCCEEEEEecCCcccChHHHHH
Q psy18021 119 ----NVLR-K-------MP----LFC---FKN------------KF---LSHWKIERVSNPTFFIVGLNDHLVPPSMMVK 164 (230)
Q Consensus 119 ----~~~~-~-------~~----~~~---~~~------------~~---~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~ 164 (230)
.... . .. .+. ... .+ .....++++++|+++++|++|.++|.+.++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~ 241 (278)
T TIGR03056 162 AADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR 241 (278)
T ss_pred cccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH
Confidence 0000 0 00 000 000 00 0123456789999999999999999999999
Q ss_pred HHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHH
Q psy18021 165 LHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLA 202 (230)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~ 202 (230)
+.+.++ +.++..++++||+.+.+.++ +.+.|.+|++
T Consensus 242 ~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 242 AATRVP--TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHhcc--CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 888877 47899999999999988874 8899999873
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.83 E-value=8.2e-20 Score=137.67 Aligned_cols=161 Identities=20% Similarity=0.264 Sum_probs=114.5
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------------------------------cH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----------------------------------GG 80 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----------------------------------Gg 80 (230)
+|+||++||++.+.. .+..+.+.+. .||+|+++|+||||.|. ||
T Consensus 13 ~~~li~~hg~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg 90 (251)
T TIGR02427 13 APVLVFINSLGTDLR-MWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGG 90 (251)
T ss_pred CCeEEEEcCcccchh-hHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchH
Confidence 679999999998854 4455555565 58999999999999986 99
Q ss_pred HHHHHHHhCCCCccccceEEEecCCCCHHH--HH----------------HHhh-hhhhcccc---c-------cccc--
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENTFTSIPD--MA----------------LILL-KWNVLRKM---P-------LFCF-- 129 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~--~~----------------~~~~-~~~~~~~~---~-------~~~~-- 129 (230)
.+++.+|... |++++++|++++...... .. .... .+....+. . ..+.
T Consensus 91 ~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (251)
T TIGR02427 91 LIAQGLAARR--PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQ 168 (251)
T ss_pred HHHHHHHHHC--HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhc
Confidence 9999999987 889999998876432100 00 0000 00000000 0 0000
Q ss_pred -----------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHH
Q psy18021 130 -----------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTI 197 (230)
Q Consensus 130 -----------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i 197 (230)
....+....+.++++|+++++|++|.++|.+..+.+.+.++ +.++++++++||..+.+.++ +.+.|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 169 PPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP--GARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred CHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--CceEEEECCCCCcccccChHHHHHHH
Confidence 00112235567889999999999999999999988888877 47899999999999988885 88888
Q ss_pred HHHH
Q psy18021 198 SQFL 201 (230)
Q Consensus 198 ~~fl 201 (230)
.+|+
T Consensus 247 ~~fl 250 (251)
T TIGR02427 247 RDFL 250 (251)
T ss_pred HHHh
Confidence 8886
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.83 E-value=4.2e-19 Score=141.20 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=124.6
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--- 78 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--- 78 (230)
|++++..-.....++.++.+....+.+ .|+|||+||++++...|.. +...|++ +|+|+++|+||||.|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~y~~~G~~~------~~~ivllHG~~~~~~~w~~-~~~~L~~-~~~Via~DlpG~G~S~~p~ 171 (383)
T PLN03084 100 FGLKMGAQSQASSDLFRWFCVESGSNN------NPPVLLIHGFPSQAYSYRK-VLPVLSK-NYHAIAFDWLGFGFSDKPQ 171 (383)
T ss_pred ccccccceeEEcCCceEEEEEecCCCC------CCeEEEECCCCCCHHHHHH-HHHHHhc-CCEEEEECCCCCCCCCCCc
Confidence 455554333345667777644332221 5689999999998655544 4555665 8999999999999764
Q ss_pred -----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCH-----HHHHH-----
Q psy18021 79 -----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSI-----PDMAL----- 113 (230)
Q Consensus 79 -----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~-----~~~~~----- 113 (230)
||.+++.++..+ |+++.++|++++.... .....
T Consensus 172 ~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~--P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~ 249 (383)
T PLN03084 172 PGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH--PDKIKKLILLNPPLTKEHAKLPSTLSEFSNF 249 (383)
T ss_pred ccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC--hHhhcEEEEECCCCccccccchHHHHHHHHH
Confidence 899999999988 9999999999976321 11000
Q ss_pred ---Hhhh---hh----hc-cc----cc---------ccc--------c----c---cCc-ccHHhh------hcCCCCEE
Q psy18021 114 ---ILLK---WN----VL-RK----MP---------LFC--------F----K---NKF-LSHWKI------ERVSNPTF 147 (230)
Q Consensus 114 ---~~~~---~~----~~-~~----~~---------~~~--------~----~---~~~-~~~~~~------~~i~~Pvl 147 (230)
..+. .. .. .. .. .+. . . ... .....+ .++++|++
T Consensus 250 l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 250 LLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPIT 329 (383)
T ss_pred HhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEE
Confidence 0000 00 00 00 00 000 0 0 000 000111 24689999
Q ss_pred EEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHH
Q psy18021 148 FIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLA 202 (230)
Q Consensus 148 ~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~ 202 (230)
+++|+.|.+++.+.++++.+.. +.++.+++++||+...+.++ +.+.|.+|+.
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 9999999999999888887763 47999999999999999985 8899999986
No 34
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.83 E-value=2.2e-19 Score=136.47 Aligned_cols=163 Identities=17% Similarity=0.214 Sum_probs=114.0
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGA 81 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~ 81 (230)
+|+|||+||++++.. .+..+...|.+ +|+|+++|+||||.|. ||.
T Consensus 16 ~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 16 NSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 678999999999954 44445555654 7999999999999887 999
Q ss_pred HHHHHHhCCCCccccceEEEecCC--CC-H---HHHHHHhhh--------h----hhc-cccc---------cccccc--
Q psy18021 82 VAIDLLARPEYASKIWCLIVENTF--TS-I---PDMALILLK--------W----NVL-RKMP---------LFCFKN-- 131 (230)
Q Consensus 82 ~a~~~a~~~~~~~~i~~~i~~~~~--~~-~---~~~~~~~~~--------~----~~~-~~~~---------~~~~~~-- 131 (230)
+++.++... |++|+++|++++. .. . ......... . ..+ .... ......
T Consensus 94 va~~~a~~~--~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (255)
T PRK10673 94 AVMALTALA--PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEW 171 (255)
T ss_pred HHHHHHHhC--HhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCccee
Confidence 999999988 8999999997531 11 0 000000000 0 000 0000 000000
Q ss_pred ------------CcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHH
Q psy18021 132 ------------KFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTIS 198 (230)
Q Consensus 132 ------------~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~ 198 (230)
.......++++++|+|+|+|++|..++.+..+.+.+.++ +.++.+++++||....+.++ +.+.|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~l~ 249 (255)
T PRK10673 172 RFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP--QARAHVIAGAGHWVHAEKPDAVLRAIR 249 (255)
T ss_pred EeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCeeeccCHHHHHHHHH
Confidence 000112345678999999999999999999988888877 58999999999999998885 889999
Q ss_pred HHHHH
Q psy18021 199 QFLAK 203 (230)
Q Consensus 199 ~fl~~ 203 (230)
+||.+
T Consensus 250 ~fl~~ 254 (255)
T PRK10673 250 RYLND 254 (255)
T ss_pred HHHhc
Confidence 99975
No 35
>PLN02578 hydrolase
Probab=99.82 E-value=1.6e-18 Score=137.73 Aligned_cols=161 Identities=16% Similarity=0.223 Sum_probs=114.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------------------------------cH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----------------------------------GG 80 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----------------------------------Gg 80 (230)
.|+||++||++++...|... ...|++ +|+|+++|+||||.|. ||
T Consensus 86 g~~vvliHG~~~~~~~w~~~-~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg 163 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYN-IPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGG 163 (354)
T ss_pred CCeEEEECCCCCCHHHHHHH-HHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHH
Confidence 45699999999985555444 445554 6999999999999987 99
Q ss_pred HHHHHHHhCCCCccccceEEEecCCCCH------------------HH-HHHH---hhh--------hh-----------
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENTFTSI------------------PD-MALI---LLK--------WN----------- 119 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~~~~~------------------~~-~~~~---~~~--------~~----------- 119 (230)
.+++.+|..+ |++++++|++++.... .. .... ... +.
T Consensus 164 ~ia~~~A~~~--p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (354)
T PLN02578 164 FTALSTAVGY--PELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVL 241 (354)
T ss_pred HHHHHHHHhC--hHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999998 9999999998652110 00 0000 000 00
Q ss_pred --hccc---cccc-------------------------c-cccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHH
Q psy18021 120 --VLRK---MPLF-------------------------C-FKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN 168 (230)
Q Consensus 120 --~~~~---~~~~-------------------------~-~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~ 168 (230)
.+.. ...+ . ....++..+.+.++++|+++|+|++|.+++.+.++++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~ 321 (354)
T PLN02578 242 KSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAF 321 (354)
T ss_pred HHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHh
Confidence 0000 0000 0 0011223456788899999999999999999999999888
Q ss_pred hCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHH
Q psy18021 169 SGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLA 202 (230)
Q Consensus 169 ~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~ 202 (230)
++ +.+++++ ++||+...+.++ +.+.|.+|++
T Consensus 322 ~p--~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 322 YP--DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CC--CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 87 4788888 589999999985 8899999985
No 36
>PRK10985 putative hydrolase; Provisional
Probab=99.82 E-value=4.3e-18 Score=133.73 Aligned_cols=197 Identities=14% Similarity=0.127 Sum_probs=126.9
Q ss_pred CceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
+++...+.++||..+...+...+... .. +|+||++||++++... +...++..|.++||+|+++|+||||.+.
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~-~~-~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQA-RH-KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccC-CC-CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 44555678889987765554322211 12 6899999999887433 4455667788899999999999998763
Q ss_pred ---------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHH-------HHhhhh
Q psy18021 79 ---------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMA-------LILLKW 118 (230)
Q Consensus 79 ---------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~-------~~~~~~ 118 (230)
||.+++.+++.......+.++|++++........ ...+..
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~ 187 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQR 187 (324)
T ss_pred eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHH
Confidence 8888777776651122488888888765432110 000000
Q ss_pred --------------hhccc-c---cccc-------------ccc------------CcccHHhhhcCCCCEEEEEecCCc
Q psy18021 119 --------------NVLRK-M---PLFC-------------FKN------------KFLSHWKIERVSNPTFFIVGLNDH 155 (230)
Q Consensus 119 --------------~~~~~-~---~~~~-------------~~~------------~~~~~~~~~~i~~Pvl~i~g~~D~ 155 (230)
..+.. . .... ... ..+....++++++|+++|+|++|.
T Consensus 188 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~ 267 (324)
T PRK10985 188 YLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDP 267 (324)
T ss_pred HHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCC
Confidence 00000 0 0000 000 112345678899999999999999
Q ss_pred ccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC----Cc--HHHHHHHHHHHhc
Q psy18021 156 LVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC----SG--YYHTISQFLAKAN 205 (230)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----~~--~~~~i~~fl~~~~ 205 (230)
+++++....+.+..+ +.++.+++++||+.+.+. +. ..+.+.+|++...
T Consensus 268 ~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 268 FMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 999887776654443 588899999999988764 23 4467888887654
No 37
>KOG1454|consensus
Probab=99.81 E-value=1.6e-18 Score=135.09 Aligned_cols=194 Identities=18% Similarity=0.146 Sum_probs=129.9
Q ss_pred eeEEEEccCCC-EEEEEEecCCC---cccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 7 ESIFVKSLDGT-KIHLYFIPQPD---VKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 7 ~~~~~~~~dg~-~l~~~~~~~~~---~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
+...++...|. .....+++... .+.+..+|+||++||++++...|...+..+....|+.|+++|++|+|.+.
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~ 105 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR 105 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCC
Confidence 45566666663 44444443331 01001167899999999987767666665545557999999999999444
Q ss_pred --------------------------------cHHHHHHHHhCCCCccccceEE---EecCCCCHH--------HHHHHh
Q psy18021 79 --------------------------------GGAVAIDLLARPEYASKIWCLI---VENTFTSIP--------DMALIL 115 (230)
Q Consensus 79 --------------------------------Gg~~a~~~a~~~~~~~~i~~~i---~~~~~~~~~--------~~~~~~ 115 (230)
||.+|+.+|+.+ |+.++++| +.++..... ......
T Consensus 106 ~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~--P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (326)
T KOG1454|consen 106 GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY--PETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKF 183 (326)
T ss_pred CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC--cccccceeeecccccccccCCcchhHHHHhhhhh
Confidence 999999999998 99999999 544422110 000000
Q ss_pred ----hhhhh-ccccc-c--------------------------cccc--------------------cCcccHHhhhcCC
Q psy18021 116 ----LKWNV-LRKMP-L--------------------------FCFK--------------------NKFLSHWKIERVS 143 (230)
Q Consensus 116 ----~~~~~-~~~~~-~--------------------------~~~~--------------------~~~~~~~~~~~i~ 143 (230)
..+.. ....+ . ...+ ........++++.
T Consensus 184 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 263 (326)
T KOG1454|consen 184 LSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIW 263 (326)
T ss_pred ccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhcccc
Confidence 00000 00000 0 0000 0012234556775
Q ss_pred -CCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 144 -NPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 144 -~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
+|+|+++|++|.++|.+.++.+.+.++ +.++++++++||....+.|+ ++..|..|+...
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999998884 69999999999999998885 999999999875
No 38
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.81 E-value=2.7e-18 Score=132.59 Aligned_cols=184 Identities=15% Similarity=0.227 Sum_probs=119.3
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
.+++++..+++ +|.++++.. ... .|+|||+||++.+.. .|..+...|.+ +|+|+++|+||||.|+
T Consensus 11 ~~~~~~~~~~~-~~~~i~y~~--~G~------~~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~ 79 (286)
T PRK03204 11 LYPFESRWFDS-SRGRIHYID--EGT------GPPILLCHGNPTWSF-LYRDIIVALRD-RFRCVAPDYLGFGLSERPSG 79 (286)
T ss_pred cccccceEEEc-CCcEEEEEE--CCC------CCEEEEECCCCccHH-HHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc
Confidence 34555666666 456665332 221 468999999987743 44555556655 6999999999999876
Q ss_pred -------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCH----H-HHHHHhhh-----
Q psy18021 79 -------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSI----P-DMALILLK----- 117 (230)
Q Consensus 79 -------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~----~-~~~~~~~~----- 117 (230)
||.+++.++..+ |++++++|+.++.... . ........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T PRK03204 80 FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVER--ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ 157 (286)
T ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhC--hhheeEEEEECccccCCCchhHHHHHHHhccccch
Confidence 999999999988 8999999987764310 0 00000000
Q ss_pred ----------hhhcc-----ccc----ccccc---------------cCcc-cH---Hh----hhc--CCCCEEEEEecC
Q psy18021 118 ----------WNVLR-----KMP----LFCFK---------------NKFL-SH---WK----IER--VSNPTFFIVGLN 153 (230)
Q Consensus 118 ----------~~~~~-----~~~----~~~~~---------------~~~~-~~---~~----~~~--i~~Pvl~i~g~~ 153 (230)
..... ... ..... ..+. .. .. +.+ +++|+++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~ 237 (286)
T PRK03204 158 YAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMK 237 (286)
T ss_pred hhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCC
Confidence 00000 000 00000 0000 00 11 111 279999999999
Q ss_pred CcccChH-HHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHH
Q psy18021 154 DHLVPPS-MMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFL 201 (230)
Q Consensus 154 D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl 201 (230)
|.++++. ..+.+.+.++ +.++++++++||+.+.+.|+ +.+.|.+|+
T Consensus 238 D~~~~~~~~~~~~~~~ip--~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 238 DVAFRPKTILPRLRATFP--DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CcccCcHHHHHHHHHhcC--CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9998655 5677777777 58999999999999999996 888899886
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.81 E-value=8.6e-19 Score=132.23 Aligned_cols=156 Identities=18% Similarity=0.261 Sum_probs=105.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGA 81 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~ 81 (230)
.|+|||+||++++...|. .+...| + +|+|+++|+||||.|. ||.
T Consensus 2 ~p~vvllHG~~~~~~~w~-~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ-PVGEAL-P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChHHHH-HHHHHc-C-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999965554 444556 3 6999999999999986 999
Q ss_pred HHHHHHhCCCCccc-cceEEEecCCCCH---HHHHHH------h---hh----------h---hhcccc-cc----ccc-
Q psy18021 82 VAIDLLARPEYASK-IWCLIVENTFTSI---PDMALI------L---LK----------W---NVLRKM-PL----FCF- 129 (230)
Q Consensus 82 ~a~~~a~~~~~~~~-i~~~i~~~~~~~~---~~~~~~------~---~~----------~---~~~~~~-~~----~~~- 129 (230)
+++.++..+ +++ ++++++.++.... ...... + +. + ...... .. +..
T Consensus 79 va~~~a~~~--~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (242)
T PRK11126 79 IAMYYACQG--LAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAK 156 (242)
T ss_pred HHHHHHHhC--CcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHh
Confidence 999999987 554 9999998764321 100000 0 00 0 000000 00 000
Q ss_pred ------------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC
Q psy18021 130 ------------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS 191 (230)
Q Consensus 130 ------------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 191 (230)
....+..+.+.++++|+++++|++|..+. .+.+.. +.++++++++||+.+.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~~~~~~i~~~gH~~~~e~p 228 (242)
T PRK11126 157 RSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL---ALPLHVIPNAGHNAHRENP 228 (242)
T ss_pred cccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh---cCeEEEeCCCCCchhhhCh
Confidence 00112235677889999999999998652 222222 4899999999999999998
Q ss_pred c-HHHHHHHHHHH
Q psy18021 192 G-YYHTISQFLAK 203 (230)
Q Consensus 192 ~-~~~~i~~fl~~ 203 (230)
+ +.+.|.+|+.+
T Consensus 229 ~~~~~~i~~fl~~ 241 (242)
T PRK11126 229 AAFAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 5 88999999975
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=6.4e-18 Score=136.03 Aligned_cols=169 Identities=17% Similarity=0.142 Sum_probs=116.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
+|+|||+||++++...|...+. .|.+ +|+|+++|+||||.|.
T Consensus 105 ~p~vvllHG~~~~~~~~~~~~~-~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvG 182 (402)
T PLN02894 105 APTLVMVHGYGASQGFFFRNFD-ALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLG 182 (402)
T ss_pred CCEEEEECCCCcchhHHHHHHH-HHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 6899999999988655555554 4554 6999999999999875
Q ss_pred ---cHHHHHHHHhCCCCccccceEEEecCCCCHH------HHHHH----h------------------------------
Q psy18021 79 ---GGAVAIDLLARPEYASKIWCLIVENTFTSIP------DMALI----L------------------------------ 115 (230)
Q Consensus 79 ---Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~------~~~~~----~------------------------------ 115 (230)
||.+++.++..+ |++++++|+++|..... +.... +
T Consensus 183 hS~GG~la~~~a~~~--p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 183 HSFGGYVAAKYALKH--PEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred ECHHHHHHHHHHHhC--chhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999998 89999999988742110 00000 0
Q ss_pred --hhhhhcc-c-----cc----c----cc-----------------c----ccCcccHHhhhcCCCCEEEEEecCCcccC
Q psy18021 116 --LKWNVLR-K-----MP----L----FC-----------------F----KNKFLSHWKIERVSNPTFFIVGLNDHLVP 158 (230)
Q Consensus 116 --~~~~~~~-~-----~~----~----~~-----------------~----~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~ 158 (230)
+....+. . +. . +. . ....+....+.++++|+++|+|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 0000000 0 00 0 00 0 00112234567789999999999998765
Q ss_pred hHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhcccCC
Q psy18021 159 PSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKANDFLP 209 (230)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~~~~~ 209 (230)
....++.+.... ..++++++++||+...+.++ +.+.|.+|++..++...
T Consensus 341 -~~~~~~~~~~~~-~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 341 -EGAVEARKRMKV-PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred -HHHHHHHHHcCC-CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 556666666543 47899999999999999985 99999999998886543
No 41
>PRK07581 hypothetical protein; Validated
Probab=99.79 E-value=5.5e-18 Score=134.07 Aligned_cols=70 Identities=14% Similarity=0.021 Sum_probs=61.1
Q ss_pred cHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCC-CCCCCcCCCC-cHHHHHHHHHHHhcc
Q psy18021 135 SHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFES-GSHNDTWKCS-GYYHTISQFLAKAND 206 (230)
Q Consensus 135 ~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~-~~~~~i~~fl~~~~~ 206 (230)
....+.++++|+|+|+|++|.++|++.++.+.+.++ +.+++++++ +||....+.+ ++...|.+||++.+.
T Consensus 267 ~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip--~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 267 LAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP--NAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 345677899999999999999999999999888887 489999998 8999988877 588999999998763
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.79 E-value=3e-18 Score=128.91 Aligned_cols=159 Identities=18% Similarity=0.248 Sum_probs=109.8
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------------------------------------
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------- 78 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------- 78 (230)
|+||++||++++... +..+...|+ .||.|+++|+||+|.|.
T Consensus 2 ~~vv~~hG~~~~~~~-~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD-WQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CEEEEEcCCCCchhh-HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 689999999998554 445555666 69999999999999886
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHH-------------HH------------hhhhhhccc---cccccc-
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMA-------------LI------------LLKWNVLRK---MPLFCF- 129 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~-------------~~------------~~~~~~~~~---~~~~~~- 129 (230)
||.+++.++..+ |..+.+++++++........ .. +.....+.. ......
T Consensus 80 Gg~ia~~~a~~~--~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR03695 80 GGRIALYYALQY--PERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQ 157 (251)
T ss_pred HHHHHHHHHHhC--chheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhH
Confidence 999999999998 88999999988753321100 00 000000000 000000
Q ss_pred -----------------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCC
Q psy18021 130 -----------------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHND 186 (230)
Q Consensus 130 -----------------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 186 (230)
....+....+.++++|+++++|++|..++ +..+.+.+..+ +.+++.++++||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~ 234 (251)
T TIGR03695 158 ALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP--NLTLVIIANAGHNI 234 (251)
T ss_pred HHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC--CCcEEEEcCCCCCc
Confidence 00011234467789999999999998764 45555665554 58999999999999
Q ss_pred cCCCCc-HHHHHHHHH
Q psy18021 187 TWKCSG-YYHTISQFL 201 (230)
Q Consensus 187 ~~~~~~-~~~~i~~fl 201 (230)
..+.++ +.+.|.+||
T Consensus 235 ~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 235 HLENPEAFAKILLAFL 250 (251)
T ss_pred CccChHHHHHHHHHHh
Confidence 988885 888888887
No 43
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.79 E-value=8.7e-19 Score=130.01 Aligned_cols=149 Identities=23% Similarity=0.327 Sum_probs=108.7
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------cHH
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------GGA 81 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------Gg~ 81 (230)
|||+||++++.. .+..+.+.|+ +||+|+++|+||+|.|. ||.
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccc
Confidence 799999999964 4444555665 69999999999999986 999
Q ss_pred HHHHHHhCCCCccccceEEEecCCCCHHHHH---------HHhhhh-----------hhccccc-----ccccc------
Q psy18021 82 VAIDLLARPEYASKIWCLIVENTFTSIPDMA---------LILLKW-----------NVLRKMP-----LFCFK------ 130 (230)
Q Consensus 82 ~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~---------~~~~~~-----------~~~~~~~-----~~~~~------ 130 (230)
+++.++..+ |++++++|++++........ ...... ....... .....
T Consensus 79 ~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (228)
T PF12697_consen 79 IALRLAARY--PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALA 156 (228)
T ss_dssp HHHHHHHHS--GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ccccccccc--ccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 999999988 88999999999988543211 111000 0000000 00000
Q ss_pred -------cCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc
Q psy18021 131 -------NKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG 192 (230)
Q Consensus 131 -------~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 192 (230)
...+....++++++|+++++|++|.+++.+..+++.+.++ ++++++++++||+...+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 157 EYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp HHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTHHHHSHH
T ss_pred cccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCccHHHCHH
Confidence 1122345678889999999999999999999999988877 58999999999999888774
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.79 E-value=1.1e-17 Score=131.58 Aligned_cols=187 Identities=17% Similarity=0.164 Sum_probs=123.8
Q ss_pred EEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhh-------------------------HHHHHHhhccCCce
Q psy18021 11 VKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHR-------------------------LHNVAGLHSMLKCN 65 (230)
Q Consensus 11 ~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~-------------------------~~~~~~~~~~~g~~ 65 (230)
|++.||..|.++.+.+.+. +.+|+++||.+++.... ...+++.|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~~~-----kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNA-----IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeeccCC-----eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 5677999998888876532 66999999999986421 13467788889999
Q ss_pred EEEEeccCCcCCC--------------------------------------------------------------cHHHH
Q psy18021 66 VLMVEYRGYGKSQ--------------------------------------------------------------GGAVA 83 (230)
Q Consensus 66 vi~~d~rG~G~s~--------------------------------------------------------------Gg~~a 83 (230)
|+++|+||||+|. ||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 9999999999765 66666
Q ss_pred HHHHhCCCC------ccccceEEEecCCCCHH-----------H----HHHHhhhh-hhccccc-cccc----------c
Q psy18021 84 IDLLARPEY------ASKIWCLIVENTFTSIP-----------D----MALILLKW-NVLRKMP-LFCF----------K 130 (230)
Q Consensus 84 ~~~a~~~~~------~~~i~~~i~~~~~~~~~-----------~----~~~~~~~~-~~~~~~~-~~~~----------~ 130 (230)
+.++..... ...++++|+.+|...+. . ........ +...... .+.. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKF 236 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhc
Confidence 666543210 12578888777753211 0 01000000 0000000 0000 0
Q ss_pred cC--cc-------------c----HHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 131 NK--FL-------------S----HWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 131 ~~--~~-------------~----~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
+. ++ . ...+.++ ++|+|+++|++|.+++++.++.+++.+..+++++.++++++|..+.+
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 00 00 0 1233455 68999999999999999999999988776568999999999999987
Q ss_pred CC--cHHHHHHHHHH
Q psy18021 190 CS--GYYHTISQFLA 202 (230)
Q Consensus 190 ~~--~~~~~i~~fl~ 202 (230)
.. ++.+.|.+||.
T Consensus 317 ~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCHHHHHHHHHHHhh
Confidence 64 48888999985
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.79 E-value=1.2e-17 Score=130.21 Aligned_cols=185 Identities=16% Similarity=0.203 Sum_probs=122.4
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
..+-++...||.++.+.....++ .++|||+||++++... . .+...+...+|+|+++|+||||.|.
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~~------~~~lvllHG~~~~~~~-~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 75 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNPD------GKPVVFLHGGPGSGTD-P-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE 75 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCCC------CCEEEEECCCCCCCCC-H-HHHhccCccCCEEEEECCCCCCCCCCCCCccc
Confidence 34567777788888754432221 3579999998877332 2 2333444568999999999999886
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH----------------HHH
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD----------------MAL 113 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~----------------~~~ 113 (230)
||.+++.++..+ |++++++|+.+++..... ...
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTH--PEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQ 153 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHC--hHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHH
Confidence 999999999988 889999999876542100 000
Q ss_pred Hhhhh---hh-------------cccc-----------cccc----cc---c---------------C-----------c
Q psy18021 114 ILLKW---NV-------------LRKM-----------PLFC----FK---N---------------K-----------F 133 (230)
Q Consensus 114 ~~~~~---~~-------------~~~~-----------~~~~----~~---~---------------~-----------~ 133 (230)
..... .. .... ..|. .+ . . .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T TIGR01249 154 RFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFL 233 (306)
T ss_pred HHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchh
Confidence 00000 00 0000 0000 00 0 0 0
Q ss_pred c----cHHhhhcC-CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHh
Q psy18021 134 L----SHWKIERV-SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKA 204 (230)
Q Consensus 134 ~----~~~~~~~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 204 (230)
+ ....+.++ ++|+|++||++|.++|.+.++++++.++ +.++++++++||... .++..+.|.+|+.+.
T Consensus 234 ~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~gH~~~--~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 234 DVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP--EAELKVTNNAGHSAF--DPNNLAALVHALETY 305 (306)
T ss_pred cCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCCCC--ChHHHHHHHHHHHHh
Confidence 0 12234556 5899999999999999999999999887 589999999999875 445677788888764
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.78 E-value=5.9e-18 Score=135.49 Aligned_cols=160 Identities=21% Similarity=0.300 Sum_probs=110.6
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----------------------------------cH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----------------------------------GG 80 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----------------------------------Gg 80 (230)
.|+|||+||++++...|..... .|.+ +|+|+++|+||||.|. ||
T Consensus 131 ~~~vl~~HG~~~~~~~~~~~~~-~l~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg 208 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWLFNHA-ALAA-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGG 208 (371)
T ss_pred CCeEEEECCCCCccchHHHHHH-HHhc-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHH
Confidence 5689999999999665554444 4555 5999999999999983 99
Q ss_pred HHHHHHHhCCCCccccceEEEecCCCCHHH----H------------HHHhhhhhh--------------cccc--c---
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENTFTSIPD----M------------ALILLKWNV--------------LRKM--P--- 125 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~----~------------~~~~~~~~~--------------~~~~--~--- 125 (230)
.+++.++..+ |.++.++|++++...... . +........ .... .
T Consensus 209 ~~a~~~a~~~--~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T PRK14875 209 AVALRLAARA--PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVD 286 (371)
T ss_pred HHHHHHHHhC--chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHH
Confidence 9999999887 889999999887532110 0 000000000 0000 0
Q ss_pred -------ccccc---cCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HH
Q psy18021 126 -------LFCFK---NKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YY 194 (230)
Q Consensus 126 -------~~~~~---~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~ 194 (230)
..... ...+....+.++++|+|+++|++|.++|++.++.+ .. +.++.+++++||+...+.++ +.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~-~~~~~~~~~~gH~~~~e~p~~~~ 361 (371)
T PRK14875 287 DALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PD-GVAVHVLPGAGHMPQMEAAADVN 361 (371)
T ss_pred HHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cC-CCeEEEeCCCCCChhhhCHHHHH
Confidence 00000 01233446778899999999999999998776543 22 48899999999999998885 88
Q ss_pred HHHHHHHHH
Q psy18021 195 HTISQFLAK 203 (230)
Q Consensus 195 ~~i~~fl~~ 203 (230)
+.|.+||++
T Consensus 362 ~~i~~fl~~ 370 (371)
T PRK14875 362 RLLAEFLGK 370 (371)
T ss_pred HHHHHHhcc
Confidence 888888864
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.77 E-value=7.5e-17 Score=123.77 Aligned_cols=188 Identities=14% Similarity=0.077 Sum_probs=120.3
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc---hhhHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI---GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~---~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
+.+.+.. +|..+.+++..|.+.. ++.||++||++... ...+..+++.|+++||.|+++|+||||.|.
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~~----~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~ 77 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGASH----TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLG 77 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCCC----CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 4566765 4677888877765432 45688888776432 122345667788899999999999999986
Q ss_pred --------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH-----HHHHhhhhh--
Q psy18021 79 --------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD-----MALILLKWN-- 119 (230)
Q Consensus 79 --------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~~~~~-- 119 (230)
||.+++.++... .+++++|+++|+....+ .....+...
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~---~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD---LRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLL 154 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC---CCccEEEEECCccCCcccchHHHHHHHHHHHHh
Confidence 888888887653 68999999999854211 111111000
Q ss_pred ---hcc-ccc-c----------------ccccc--------CcccHHhhhcCCCCEEEEEecCCcccChHH-----HHHH
Q psy18021 120 ---VLR-KMP-L----------------FCFKN--------KFLSHWKIERVSNPTFFIVGLNDHLVPPSM-----MVKL 165 (230)
Q Consensus 120 ---~~~-~~~-~----------------~~~~~--------~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~-----~~~~ 165 (230)
.+. ..+ . +.... .-+....+.++++|+++++|..|...+.-. ..+.
T Consensus 155 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~ 234 (274)
T TIGR03100 155 SADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAW 234 (274)
T ss_pred ChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhh
Confidence 000 000 0 00000 001124566789999999999998864211 1344
Q ss_pred HHHhCCCcceEEEeCCCCCCCcCCCC--cHHHHHHHHHH
Q psy18021 166 HENSGGILKQIVLFESGSHNDTWKCS--GYYHTISQFLA 202 (230)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~ 202 (230)
.+.+..++++++.+++++|+...+.. ++.+.|.+||+
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 44454456899999999998755544 48899999985
No 48
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.76 E-value=2.6e-17 Score=127.79 Aligned_cols=188 Identities=20% Similarity=0.284 Sum_probs=121.1
Q ss_pred CceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcC-CC-----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGK-SQ----- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~-s~----- 78 (230)
...++.|.+.+|..+.+++..|.....+ .|+||.+||+++....+...+ .++..||.|+.+|.||+|. +.
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~~~~--~Pavv~~hGyg~~~~~~~~~~--~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNAKGK--LPAVVQFHGYGGRSGDPFDLL--PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-SSSS--EEEEEEE--TT--GGGHHHHH--HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEEccCCCEEEEEEEecCCCCCC--cCEEEEecCCCCCCCCccccc--ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 3467889998999999999988743222 899999999999855444433 2577899999999999993 32
Q ss_pred ------------------------------------------------------cHHHHHHHHhCCCCccccceEEEecC
Q psy18021 79 ------------------------------------------------------GGAVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 79 ------------------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
||.+++.+|+.. ++|++++...|
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd---~rv~~~~~~vP 207 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD---PRVKAAAADVP 207 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS---ST-SEEEEESE
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC---ccccEEEecCC
Confidence 999999988877 68999999988
Q ss_pred CCCH-HHHHHHhhhhhhcccccccc---------------cccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHH
Q psy18021 105 FTSI-PDMALILLKWNVLRKMPLFC---------------FKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN 168 (230)
Q Consensus 105 ~~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~ 168 (230)
+..- ...+........+..+..++ .-.-+|.....++|++|+++-.|-.|.++|+......++.
T Consensus 208 ~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~ 287 (320)
T PF05448_consen 208 FLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNA 287 (320)
T ss_dssp SSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC
T ss_pred CccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhc
Confidence 7653 32222211000000000111 0113566778889999999999999999999999999999
Q ss_pred hCCCcceEEEeCCCCCCCcCCCCcH-HHHHHHHHHH
Q psy18021 169 SGGILKQIVLFESGSHNDTWKCSGY-YHTISQFLAK 203 (230)
Q Consensus 169 ~~~~~~~~~~~~~~~H~~~~~~~~~-~~~i~~fl~~ 203 (230)
++.+ ++++++|..+|.. .+++ .+...+||.+
T Consensus 288 i~~~-K~l~vyp~~~He~---~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 288 IPGP-KELVVYPEYGHEY---GPEFQEDKQLNFLKE 319 (320)
T ss_dssp --SS-EEEEEETT--SST---THHHHHHHHHHHHHH
T ss_pred cCCC-eeEEeccCcCCCc---hhhHHHHHHHHHHhc
Confidence 9975 9999999999933 3344 6778888876
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.76 E-value=1.3e-17 Score=132.04 Aligned_cols=66 Identities=23% Similarity=0.261 Sum_probs=57.8
Q ss_pred hhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCC-CCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 139 IERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFES-GSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 139 ~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
+.++++|+|+++|+.|.++|++.++++.+.+.. +.+++++++ +||....+.|+ +.+.|.+||.+.-
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p-~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP-RGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC-CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 567899999999999999999999998888743 489999985 99999999995 9999999998754
No 50
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.75 E-value=2.5e-17 Score=114.49 Aligned_cols=116 Identities=28% Similarity=0.477 Sum_probs=95.1
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------cHHHHHHHH
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------GGAVAIDLL 87 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------Gg~~a~~~a 87 (230)
+||++||++++.. .+..+++.++++||.|+.+|+|++|.+. ||.+++.++
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~ 79 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLA 79 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHh
Confidence 5999999999844 4667777888899999999999999887 777777777
Q ss_pred hCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHH
Q psy18021 88 ARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHE 167 (230)
Q Consensus 88 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~ 167 (230)
... ++++++|+++++ ...+.+.+.++|+++++|++|.+++++..+++++
T Consensus 80 ~~~---~~v~~~v~~~~~----------------------------~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~ 128 (145)
T PF12695_consen 80 ARN---PRVKAVVLLSPY----------------------------PDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYE 128 (145)
T ss_dssp HHS---TTESEEEEESES----------------------------SGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHH
T ss_pred hhc---cceeEEEEecCc----------------------------cchhhhhccCCcEEEEEECCCCcCCHHHHHHHHH
Confidence 754 577888887772 1245566788899999999999999999999999
Q ss_pred HhCCCcceEEEeCCCCCC
Q psy18021 168 NSGGILKQIVLFESGSHN 185 (230)
Q Consensus 168 ~~~~~~~~~~~~~~~~H~ 185 (230)
.++. +.+++++++++|+
T Consensus 129 ~~~~-~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 129 ALPG-PKELYIIPGAGHF 145 (145)
T ss_dssp HHCS-SEEEEEETTS-TT
T ss_pred HcCC-CcEEEEeCCCcCc
Confidence 9994 5999999999995
No 51
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.74 E-value=1.2e-16 Score=122.49 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=111.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
+|+|||+||++.+.. .|..+...|.+.||+|+++|+||||.|.
T Consensus 18 ~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~ 96 (273)
T PLN02211 18 PPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSA 96 (273)
T ss_pred CCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 678999999999854 5566666787789999999999999763
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCC-----HH-HHHHHhhhh----hh----ccc----------c-----ccccc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTS-----IP-DMALILLKW----NV----LRK----------M-----PLFCF 129 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~-----~~-~~~~~~~~~----~~----~~~----------~-----~~~~~ 129 (230)
||.+++.++..+ |++++++|+++++.. .. ......... .. ... . ..++.
T Consensus 97 GG~v~~~~a~~~--p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
T PLN02211 97 GGLSVTQAIHRF--PKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILY 174 (273)
T ss_pred hHHHHHHHHHhC--hhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHh
Confidence 999999999877 889999999977432 11 110000000 00 000 0 00000
Q ss_pred c-------------------cCc---ccHHhhhcC-CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCC
Q psy18021 130 K-------------------NKF---LSHWKIERV-SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHND 186 (230)
Q Consensus 130 ~-------------------~~~---~~~~~~~~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 186 (230)
. ..+ +......++ ++|+++|.|++|.++|++..+.+.+.++. .+++.++ +||..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~--~~~~~l~-~gH~p 251 (273)
T PLN02211 175 QMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP--SQVYELE-SDHSP 251 (273)
T ss_pred cCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc--cEEEEEC-CCCCc
Confidence 0 000 001112344 78999999999999999999999988874 5888887 79999
Q ss_pred cCCCCc-HHHHHHHHHHH
Q psy18021 187 TWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 187 ~~~~~~-~~~~i~~fl~~ 203 (230)
+.+.|+ +.+.|.+....
T Consensus 252 ~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 252 FFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 999985 76766666543
No 52
>KOG4667|consensus
Probab=99.74 E-value=4e-17 Score=115.30 Aligned_cols=187 Identities=16% Similarity=0.126 Sum_probs=130.8
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------ 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------ 78 (230)
.+.+.++...+..+.+.....+. ..+||++||+-++.. .....++..+++.||.++.+|++|.|+|.
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~tgs------~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G 83 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHETGS------TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG 83 (269)
T ss_pred eeEEEeccCCCchhhcceeccCC------ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC
Confidence 45667777667777664444333 458999999998863 45667788899999999999999999998
Q ss_pred -------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHh---------hhh
Q psy18021 79 -------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALIL---------LKW 118 (230)
Q Consensus 79 -------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~---------~~~ 118 (230)
||.+++.++..+ ..+.-+|-.++.......+... ...
T Consensus 84 n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~---~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~ 160 (269)
T KOG4667|consen 84 NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKY---HDIRNVINCSGRYDLKNGINERLGEDYLERIKEQ 160 (269)
T ss_pred cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhh---cCchheEEcccccchhcchhhhhcccHHHHHHhC
Confidence 999999999998 3477888877755544333211 110
Q ss_pred hhccccc-------ccccc---c--CcccHHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCC
Q psy18021 119 NVLRKMP-------LFCFK---N--KFLSHWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSH 184 (230)
Q Consensus 119 ~~~~~~~-------~~~~~---~--~~~~~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H 184 (230)
..+...+ .|... + .-+..+...+| +||||-+||..|.+||.+.+.++++.+++ ..+.+++|+.|
T Consensus 161 Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n--H~L~iIEgADH 238 (269)
T KOG4667|consen 161 GFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN--HKLEIIEGADH 238 (269)
T ss_pred CceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC--CceEEecCCCc
Confidence 0000000 01000 0 01123334445 69999999999999999999999999994 89999999999
Q ss_pred CCcCCCCcHHHHHHHHHHH
Q psy18021 185 NDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 185 ~~~~~~~~~~~~i~~fl~~ 203 (230)
+....+.+.......|..-
T Consensus 239 nyt~~q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 239 NYTGHQSQLVSLGLEFIKT 257 (269)
T ss_pred CccchhhhHhhhcceeEEe
Confidence 9887766666655555543
No 53
>PRK10115 protease 2; Provisional
Probab=99.72 E-value=5.3e-16 Score=132.15 Aligned_cols=201 Identities=14% Similarity=0.107 Sum_probs=138.3
Q ss_pred CCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
+..+.+++++.||.+++++++.++.....++.|+||++||+.+... ..+......+.++||.|+.+++||-|.-.
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 4568899999999999986665333211122799999999887742 23333344677889999999999976655
Q ss_pred ----------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHH--hh
Q psy18021 79 ----------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALI--LL 116 (230)
Q Consensus 79 ----------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~--~~ 116 (230)
||.++..++... |++++++|...|+.++...+.. ..
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~--Pdlf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR--PELFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC--hhheeEEEecCCchhHhhhcccCCCC
Confidence 999999888888 8999999999999887654311 00
Q ss_pred -hhhh---cc--cccc-cccccCcccHHhhhcCCCC-EEEEEecCCcccChHHHHHHHHHhCCC--cceEEEe---CCCC
Q psy18021 117 -KWNV---LR--KMPL-FCFKNKFLSHWKIERVSNP-TFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLF---ESGS 183 (230)
Q Consensus 117 -~~~~---~~--~~~~-~~~~~~~~~~~~~~~i~~P-vl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~---~~~~ 183 (230)
.+.. +. ..+. ......+++...+.+++.| +|+++|.+|..||+.++.++.++++.. +.+++++ +++|
T Consensus 572 ~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~G 651 (686)
T PRK10115 572 LTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSG 651 (686)
T ss_pred CChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 0000 00 0000 0111246677778888889 567799999999999999999988652 4567777 8999
Q ss_pred CCCcCCCCcH---HHHHHHHHHHhcc
Q psy18021 184 HNDTWKCSGY---YHTISQFLAKAND 206 (230)
Q Consensus 184 H~~~~~~~~~---~~~i~~fl~~~~~ 206 (230)
|.......+. ......||-..+.
T Consensus 652 Hg~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 652 HGGKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHhC
Confidence 9843322222 2345667766654
No 54
>PLN02872 triacylglycerol lipase
Probab=99.72 E-value=4.6e-17 Score=129.87 Aligned_cols=202 Identities=13% Similarity=0.132 Sum_probs=131.5
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcc--cCCCCcEEEEEcCCCCCchhhH-----HHHHHhhccCCceEEEEeccCC
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVK--AKCETMTLVYLHGNAGNIGHRL-----HNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~--~~~~~p~vv~~HG~~~~~~~~~-----~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
++++.|+..++++||..|....+++.... ..+ +|+||++||+..+...|. ..++..|+++||+|+++|+||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~-~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQR-GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCC-CCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 57899999999999999998888644321 122 678999999987754432 2355567889999999999998
Q ss_pred cCCC-----------------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCC
Q psy18021 75 GKSQ-----------------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTS 107 (230)
Q Consensus 75 G~s~-----------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~ 107 (230)
+.|. ||.+++.++...+....++.+++.+|...
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhh
Confidence 6431 88888755543212236777777777432
Q ss_pred HHH--------HH----HHh---hhhhh-------cc----cc---c--------ccccc--------------------
Q psy18021 108 IPD--------MA----LIL---LKWNV-------LR----KM---P--------LFCFK-------------------- 130 (230)
Q Consensus 108 ~~~--------~~----~~~---~~~~~-------~~----~~---~--------~~~~~-------------------- 130 (230)
+.. .. ... +.... .. .+ . .+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagt 278 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPS 278 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcc
Confidence 100 00 000 00000 00 00 0 00000
Q ss_pred -----------------cCcc---------------cHHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCCCcceE
Q psy18021 131 -----------------NKFL---------------SHWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQI 176 (230)
Q Consensus 131 -----------------~~~~---------------~~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~ 176 (230)
..|+ +.-.++++ ++|+++++|++|.+++++.++++.+.++.. .++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-~~l 357 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSK-PEL 357 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCc-cEE
Confidence 0011 12245666 589999999999999999999999999853 688
Q ss_pred EEeCCCCCCCc---CCCCc-HHHHHHHHHHHhc
Q psy18021 177 VLFESGSHNDT---WKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 177 ~~~~~~~H~~~---~~~~~-~~~~i~~fl~~~~ 205 (230)
+.+++.+|..+ .+.++ +.+.|.+|+++..
T Consensus 358 ~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 358 LYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 88999999744 34454 8899999998754
No 55
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.72 E-value=1.3e-16 Score=126.86 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=54.9
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEE-----EeCCCCCCCcCCCCc-HHHHHHHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV-----LFESGSHNDTWKCSG-YYHTISQFLA 202 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~H~~~~~~~~-~~~~i~~fl~ 202 (230)
.+.+++|++|+|+|+|++|.++|++.++++.+.+++ .++. +++++||..+.+.++ +.+.|.+||+
T Consensus 281 ~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~--~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 281 TEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA--AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh--cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 356778899999999999999999999999999985 3333 457899999998885 8899999973
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=99.71 E-value=2.1e-16 Score=133.63 Aligned_cols=183 Identities=21% Similarity=0.193 Sum_probs=116.0
Q ss_pred EccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------------
Q psy18021 12 KSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------- 78 (230)
Q Consensus 12 ~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------- 78 (230)
...||..+.++...+++ .|+|||+||++++...| ..+.+.| ..||+|+++|+||||.|.
T Consensus 8 ~~~~g~~l~~~~~g~~~------~~~ivllHG~~~~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 8 VSSDGVRLAVYEWGDPD------RPTVVLVHGYPDNHEVW-DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EeeCCEEEEEEEcCCCC------CCeEEEEcCCCchHHHH-HHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 34578888766553322 57899999999985544 4455556 458999999999999985
Q ss_pred ------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH------------------HHHHHhh
Q psy18021 79 ------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP------------------DMALILL 116 (230)
Q Consensus 79 ------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~------------------~~~~~~~ 116 (230)
||.+++.++.....+.++..++..++..... .......
T Consensus 80 a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (582)
T PRK05855 80 ADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLL 159 (582)
T ss_pred HHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHh
Confidence 8888887776653455666555544321100 0000000
Q ss_pred hhh----------------------h---cccccccccc--------cC-c-------------ccHHhhhcCCCCEEEE
Q psy18021 117 KWN----------------------V---LRKMPLFCFK--------NK-F-------------LSHWKIERVSNPTFFI 149 (230)
Q Consensus 117 ~~~----------------------~---~~~~~~~~~~--------~~-~-------------~~~~~~~~i~~Pvl~i 149 (230)
... . .......... .. . .....+..+++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 239 (582)
T PRK05855 160 RSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLI 239 (582)
T ss_pred hhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEE
Confidence 000 0 0000000000 00 0 0001133478999999
Q ss_pred EecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 150 VGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 150 ~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
+|++|.++|++..+.+.+.++ ..++++++ +||+.+.+.++ +.+.|.+|+.+..
T Consensus 240 ~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 240 VPTGDPYVRPALYDDLSRWVP--RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred EeCCCcccCHHHhccccccCC--cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 999999999998888877665 46777776 69999998886 8899999998754
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.71 E-value=1.1e-16 Score=115.94 Aligned_cols=154 Identities=16% Similarity=0.114 Sum_probs=104.0
Q ss_pred cEEEEEcCCCCCchhhHH-HHHHhhcc--CCceEEEEeccCCcCCC-----------------------cHHHHHHHHhC
Q psy18021 36 MTLVYLHGNAGNIGHRLH-NVAGLHSM--LKCNVLMVEYRGYGKSQ-----------------------GGAVAIDLLAR 89 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~-~~~~~~~~--~g~~vi~~d~rG~G~s~-----------------------Gg~~a~~~a~~ 89 (230)
|+||++||++++...+.. .+...+.+ .+|.|+++|+|||+... ||.+++.++..
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHH
Confidence 579999999999766553 34455544 37999999999997543 99999999998
Q ss_pred CCCccccceEEEecCCCCHHHHHHHhhhhhhccccc-ccccc-c------CcccHHhhhcCCCCEEEEEecCCcccChHH
Q psy18021 90 PEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMP-LFCFK-N------KFLSHWKIERVSNPTFFIVGLNDHLVPPSM 161 (230)
Q Consensus 90 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~ 161 (230)
. |. .+|+++|.....+............+.+ .+... . .++ ...+. ..+|++++||++|+++|++.
T Consensus 82 ~--~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~i~-~~~~v~iihg~~De~V~~~~ 154 (190)
T PRK11071 82 F--ML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQ-IDPLE-SPDLIWLLQQTGDEVLDYRQ 154 (190)
T ss_pred c--CC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcC-CccCC-ChhhEEEEEeCCCCcCCHHH
Confidence 8 52 3578888766444444333221111111 11110 0 011 11122 56788999999999999999
Q ss_pred HHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 162 MVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
+.++++. ++.++++|++|..... .++++.|.+|+.
T Consensus 155 a~~~~~~-----~~~~~~~ggdH~f~~~-~~~~~~i~~fl~ 189 (190)
T PRK11071 155 AVAYYAA-----CRQTVEEGGNHAFVGF-ERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHh-----cceEEECCCCcchhhH-HHhHHHHHHHhc
Confidence 9999984 4566789999977433 458888888874
No 58
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.71 E-value=5e-16 Score=117.18 Aligned_cols=197 Identities=20% Similarity=0.203 Sum_probs=126.2
Q ss_pred CCceeEEEEccCCCEEEEEEec-CCCcccCCCCcEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC---
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIP-QPDVKAKCETMTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--- 78 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~-~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--- 78 (230)
+.++...+.++||..+...+.. +.... +|.||++||..|+. ..+...+.+.+.++||.++++++|||+.+.
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~----~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAK----KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccC----CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC
Confidence 4455567888887655554444 33332 68999999999886 346677777888999999999999999887
Q ss_pred -----------------------------------cH-HHHHHHHhCCCCccccceEEEecCCCCHHHHHHHh-------
Q psy18021 79 -----------------------------------GG-AVAIDLLARPEYASKIWCLIVENTFTSIPDMALIL------- 115 (230)
Q Consensus 79 -----------------------------------Gg-~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~------- 115 (230)
|| +++.+++.....+ .+.+.+.++...++......+
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~-~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDL-PLDAAVAVSAPFDLEACAYRLDSGFSLR 201 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCc-ccceeeeeeCHHHHHHHHHHhcCchhhh
Confidence 77 6666666655333 445555544433321110000
Q ss_pred -hh------------h--hhc-cccccc------------ccc-----------------cCcccHHhhhcCCCCEEEEE
Q psy18021 116 -LK------------W--NVL-RKMPLF------------CFK-----------------NKFLSHWKIERVSNPTFFIV 150 (230)
Q Consensus 116 -~~------------~--~~~-~~~~~~------------~~~-----------------~~~~~~~~~~~i~~Pvl~i~ 150 (230)
+. . ..+ ...+.. -+. ...++...+.+|.+|+|+||
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~ 281 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIIN 281 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEe
Confidence 00 0 000 001100 000 01234567889999999999
Q ss_pred ecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC----Cc--HHHHHHHHHHHhcc
Q psy18021 151 GLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC----SG--YYHTISQFLAKAND 206 (230)
Q Consensus 151 g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----~~--~~~~i~~fl~~~~~ 206 (230)
+.+|++++++..-+.... .++++.+.+.+.+||...... +. ..+.+.+|++..++
T Consensus 282 A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 282 AKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999999998766555443 334688999999999887663 23 23678899987654
No 59
>KOG2984|consensus
Probab=99.70 E-value=4.2e-17 Score=114.12 Aligned_cols=189 Identities=18% Similarity=0.268 Sum_probs=128.4
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC--
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-- 78 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-- 78 (230)
++..+.+-++.. +|.+|.+....... -.|+++.|..++.. ++...+..++....++++++|-||+|.|.
T Consensus 17 ~~~~~te~kv~v-ng~ql~y~~~G~G~-------~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP 88 (277)
T KOG2984|consen 17 TQSDYTESKVHV-NGTQLGYCKYGHGP-------NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP 88 (277)
T ss_pred ccchhhhheeee-cCceeeeeecCCCC-------ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC
Confidence 444454444544 35777654443322 26999999988764 45566666666666999999999999998
Q ss_pred -----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHH---HHH----HHhh
Q psy18021 79 -----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIP---DMA----LILL 116 (230)
Q Consensus 79 -----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~---~~~----~~~~ 116 (230)
||.+|+..|+.. ++.|..+|+..+-.-.. .++ +...
T Consensus 89 ~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~--~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~ 166 (277)
T KOG2984|consen 89 ERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKG--KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVN 166 (277)
T ss_pred cccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccC--hhhhhhheeecccceecchhHHHHhchHHHh
Confidence 999999999998 88999999877632211 110 0000
Q ss_pred hhhhcc-------c----cc----cccc---------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCC
Q psy18021 117 KWNVLR-------K----MP----LFCF---------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGI 172 (230)
Q Consensus 117 ~~~~~~-------~----~~----~~~~---------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~ 172 (230)
.|.... + ++ .|.. ...+ ..-.+.+++||+|++||++|++++-.++-.+....+
T Consensus 167 kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-- 243 (277)
T KOG2984|consen 167 KWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-- 243 (277)
T ss_pred hhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc--
Confidence 010000 0 00 0000 0011 345678899999999999999999888877766666
Q ss_pred cceEEEeCCCCCCCcCCCC-cHHHHHHHHHHH
Q psy18021 173 LKQIVLFESGSHNDTWKCS-GYYHTISQFLAK 203 (230)
Q Consensus 173 ~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 203 (230)
..++.++|.++|+....-+ +|++.+.+|++.
T Consensus 244 ~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 244 LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred cceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 4899999999999987666 699999999975
No 60
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.70 E-value=1.4e-15 Score=139.97 Aligned_cols=166 Identities=16% Similarity=0.225 Sum_probs=115.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+|||+||++++...|.. +...|.+ +|+|+++|+||||.|.
T Consensus 1371 ~~~vVllHG~~~s~~~w~~-~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWIP-IMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCeEEEECCCCCCHHHHHH-HHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999665544 4455554 6999999999999762
Q ss_pred ------cHHHHHHHHhCCCCccccceEEEecCCCCHHH----------------HH---------HHhhhhhhccc---c
Q psy18021 79 ------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD----------------MA---------LILLKWNVLRK---M 124 (230)
Q Consensus 79 ------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~----------------~~---------~~~~~~~~~~~---~ 124 (230)
||.+++.++..+ |++++++|++++...... .. ..++....+.. .
T Consensus 1449 LvGhSmGG~iAl~~A~~~--P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1526 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRF--SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNH 1526 (1655)
T ss_pred EEEECHHHHHHHHHHHhC--hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccC
Confidence 999999999988 899999999876321100 00 00000000000 0
Q ss_pred cc---cc----c----------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCC---------
Q psy18021 125 PL---FC----F----------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGI--------- 172 (230)
Q Consensus 125 ~~---~~----~----------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--------- 172 (230)
+. +. . ....+..+.+.++++|+|+|+|++|.+++ +.+.++.+.+++.
T Consensus 1527 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~ 1605 (1655)
T PLN02980 1527 PHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGK 1605 (1655)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccc
Confidence 00 00 0 00112235688899999999999999875 5667777766541
Q ss_pred -cceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 173 -LKQIVLFESGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 173 -~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
..++++++++||..+.+.|+ +.+.|.+||.+.-
T Consensus 1606 ~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1606 EIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred cceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 25899999999999999985 9999999999754
No 61
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=1.4e-15 Score=111.19 Aligned_cols=187 Identities=21% Similarity=0.260 Sum_probs=133.1
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC--------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-------- 78 (230)
=+++|+..+|.++.+|++-|...+.+ .|.||-.||+++....+-..+ .++..||.|+.+|-||.|.|.
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~~~~~--~P~vV~fhGY~g~~g~~~~~l--~wa~~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRHEKGK--LPAVVQFHGYGGRGGEWHDML--HWAVAGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEEeccCCceEEEEEEeecccCCc--cceEEEEeeccCCCCCccccc--cccccceeEEEEecccCCCccccCCCCCC
Confidence 45778888999999999988765422 899999999999965443433 246679999999999999884
Q ss_pred -----------------------------------------------------cHHHHHHHHhCCCCccccceEEEecCC
Q psy18021 79 -----------------------------------------------------GGAVAIDLLARPEYASKIWCLIVENTF 105 (230)
Q Consensus 79 -----------------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~ 105 (230)
||++++..++.. ++|++++.+-|+
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~---~rik~~~~~~Pf 209 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD---PRIKAVVADYPF 209 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC---hhhhcccccccc
Confidence 999999888887 799999999997
Q ss_pred CCHHHH------------HHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCc
Q psy18021 106 TSIPDM------------ALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGIL 173 (230)
Q Consensus 106 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~ 173 (230)
.+-... +..++....-.....+-.-+-++......++++|+|+..|--|+++|+......++++...
T Consensus 210 l~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~- 288 (321)
T COG3458 210 LSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTS- 288 (321)
T ss_pred cccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCC-
Confidence 752211 1111111000000000001124556667889999999999999999999999999999974
Q ss_pred ceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 174 KQIVLFESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 174 ~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
++..+++--+|.. .+. ..+.+..|++..
T Consensus 289 K~i~iy~~~aHe~---~p~~~~~~~~~~l~~l 317 (321)
T COG3458 289 KTIEIYPYFAHEG---GPGFQSRQQVHFLKIL 317 (321)
T ss_pred ceEEEeecccccc---CcchhHHHHHHHHHhh
Confidence 8888888767843 333 334466777654
No 62
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.68 E-value=1.9e-15 Score=121.18 Aligned_cols=70 Identities=14% Similarity=0.143 Sum_probs=59.6
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCC--cceEEEeC-CCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLFE-SGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~-~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
...+.+|++|+|+|+|+.|.++|++.++++.+.+++. +.++.+++ ++||....+.++ +.+.|.+||.+..
T Consensus 302 ~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 302 AAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 4567789999999999999999999999999999742 13677775 899999999985 8999999998864
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.66 E-value=1.3e-16 Score=118.11 Aligned_cols=151 Identities=19% Similarity=0.193 Sum_probs=103.3
Q ss_pred HHHHhhccCCceEEEEeccCCcCCC--------------------------------------------cHHHHHHHHhC
Q psy18021 54 NVAGLHSMLKCNVLMVEYRGYGKSQ--------------------------------------------GGAVAIDLLAR 89 (230)
Q Consensus 54 ~~~~~~~~~g~~vi~~d~rG~G~s~--------------------------------------------Gg~~a~~~a~~ 89 (230)
...++|+++||.|+.+|+||.+... ||.+++.++..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4456788999999999999987544 99999999996
Q ss_pred CCCccccceEEEecCCCCHHHHHHHh--hhh-hhcccccccccc---cCcccHHhhhc--CCCCEEEEEecCCcccChHH
Q psy18021 90 PEYASKIWCLIVENTFTSIPDMALIL--LKW-NVLRKMPLFCFK---NKFLSHWKIER--VSNPTFFIVGLNDHLVPPSM 161 (230)
Q Consensus 90 ~~~~~~i~~~i~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~---~~~~~~~~~~~--i~~Pvl~i~g~~D~~v~~~~ 161 (230)
. |++++++|..+|+.++....... +.. ........+... ...++...+.+ +++|+|++||++|..||+.+
T Consensus 85 ~--~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~ 162 (213)
T PF00326_consen 85 H--PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQ 162 (213)
T ss_dssp T--CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHH
T ss_pred c--ceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHH
Confidence 6 89999999999977654332221 100 000000000000 11233444555 78999999999999999999
Q ss_pred HHHHHHHhCC--CcceEEEeCCCCCCCcCCCC--cHHHHHHHHHHHhcc
Q psy18021 162 MVKLHENSGG--ILKQIVLFESGSHNDTWKCS--GYYHTISQFLAKAND 206 (230)
Q Consensus 162 ~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~~~~~ 206 (230)
+.++++.+.. .+.+++++|+++|....... +..+.+.+|+++.+.
T Consensus 163 s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 163 SLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 9999988865 25899999999995553332 478889999998874
No 64
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.66 E-value=5.5e-15 Score=102.91 Aligned_cols=163 Identities=18% Similarity=0.211 Sum_probs=113.5
Q ss_pred CCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc----hhhHHHHHHhhccCCceEEEEeccCCcCCC-
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI----GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ- 78 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~----~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~- 78 (230)
+.+.++.|..+-| .+.+.+.+++... .|+.|.+|.-+-.. ......++..|.++||.++.||+||-|+|.
T Consensus 2 ~~~~~v~i~Gp~G-~le~~~~~~~~~~----~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G 76 (210)
T COG2945 2 LHMPTVIINGPAG-RLEGRYEPAKTPA----APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQG 76 (210)
T ss_pred CCCCcEEecCCcc-cceeccCCCCCCC----CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccC
Confidence 3456777776654 4666666665332 78999998554222 335566777789999999999999999998
Q ss_pred ------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcc
Q psy18021 79 ------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLR 122 (230)
Q Consensus 79 ------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 122 (230)
|+.+++.+|... +.+...|.++|..+
T Consensus 77 ~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~---~e~~~~is~~p~~~--------------- 138 (210)
T COG2945 77 EFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR---PEILVFISILPPIN--------------- 138 (210)
T ss_pred cccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhc---ccccceeeccCCCC---------------
Confidence 444444444443 12233333333211
Q ss_pred cccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 123 KMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
. .....+....+|.++|+|+.|++++.....++++..+ .+++.+++++|+....-..+.+.|.+|+.
T Consensus 139 ---------~-~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~---~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 139 ---------A-YDFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK---ITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred ---------c-hhhhhccCCCCCceeEecChhhhhcHHHHHHhhcCCC---CceEEecCCCceecccHHHHHHHHHHHhh
Confidence 1 1233455668899999999999999998888887733 78899999999888777778899999985
No 65
>PLN02442 S-formylglutathione hydrolase
Probab=99.65 E-value=1e-14 Score=112.32 Aligned_cols=190 Identities=12% Similarity=0.016 Sum_probs=116.7
Q ss_pred CCceeEEEEccC-CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhH--HHHHHhhccCCceEEEEeccCCc-----
Q psy18021 4 LPYESIFVKSLD-GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRL--HNVAGLHSMLKCNVLMVEYRGYG----- 75 (230)
Q Consensus 4 ~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~g~~vi~~d~rG~G----- 75 (230)
-..+.+++.++- +..+.+..+.|+....++ .|+|+++||++++...+. ..+.+.+...|+.|+.+|..++|
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~-~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPASDSGK-VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCcccCCC-CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 344556666542 455666555444332233 899999999998854332 22345667789999999976543
Q ss_pred ----------CC-------------C--------------------------------cHHHHHHHHhCCCCccccceEE
Q psy18021 76 ----------KS-------------Q--------------------------------GGAVAIDLLARPEYASKIWCLI 100 (230)
Q Consensus 76 ----------~s-------------~--------------------------------Gg~~a~~~a~~~~~~~~i~~~i 100 (230)
.+ . ||..|+.++..+ |+++++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~--p~~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN--PDKYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC--chhEEEEE
Confidence 00 1 999999999988 89999999
Q ss_pred EecCCCCHHHH--HHHhhhhhhccccc-ccccccCcccHHhhhcCCCCEEEEEecCCcccChH-HHHHHHHHhCC--Ccc
Q psy18021 101 VENTFTSIPDM--ALILLKWNVLRKMP-LFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPS-MMVKLHENSGG--ILK 174 (230)
Q Consensus 101 ~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~-~~~~~~~~~~~--~~~ 174 (230)
..++....... ....... .+.... .|...+.......+.+.++|+++++|++|.+++.. .++.+++.++. .++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~ 251 (283)
T PLN02442 173 AFAPIANPINCPWGQKAFTN-YLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPV 251 (283)
T ss_pred EECCccCcccCchhhHHHHH-HcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCe
Confidence 99987542210 0000000 000000 11111223334445567899999999999999863 34455444432 258
Q ss_pred eEEEeCCCCCCCcCCCCcHHHHHHHHHHHhc
Q psy18021 175 QIVLFESGSHNDTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 175 ~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 205 (230)
+++++++.+|... .+.+||++.+
T Consensus 252 ~~~~~pg~~H~~~--------~~~~~i~~~~ 274 (283)
T PLN02442 252 TLRLQPGYDHSYF--------FIATFIDDHI 274 (283)
T ss_pred EEEEeCCCCccHH--------HHHHHHHHHH
Confidence 9999999999644 5556665554
No 66
>KOG1838|consensus
Probab=99.61 E-value=1.2e-13 Score=108.06 Aligned_cols=203 Identities=18% Similarity=0.258 Sum_probs=130.4
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcc---cCCCCcEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVK---AKCETMTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~---~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
...++...++++||..+..-+..+.... .....|+||++||.+++. ..+...+...+.+.||+++.++.||+|.+.
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 3567888999999988887666443331 111269999999999875 446666777788899999999999999998
Q ss_pred --------------------------------------cHHHHHHHHhCCCC-ccccceEEEecCCCCH--HHHHH----
Q psy18021 79 --------------------------------------GGAVAIDLLARPEY-ASKIWCLIVENTFTSI--PDMAL---- 113 (230)
Q Consensus 79 --------------------------------------Gg~~a~~~a~~~~~-~~~i~~~i~~~~~~~~--~~~~~---- 113 (230)
||.+...+.+.... .+-+.++.+.+||... .+...
T Consensus 170 LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~ 249 (409)
T KOG1838|consen 170 LTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLY 249 (409)
T ss_pred cCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccc
Confidence 88888876665432 4456666677776632 11100
Q ss_pred -Hhhhhhhcccccc--------c---------cc-------------------------ccCcccHHhhhcCCCCEEEEE
Q psy18021 114 -ILLKWNVLRKMPL--------F---------CF-------------------------KNKFLSHWKIERVSNPTFFIV 150 (230)
Q Consensus 114 -~~~~~~~~~~~~~--------~---------~~-------------------------~~~~~~~~~~~~i~~Pvl~i~ 150 (230)
..+.......+.. + .. ...-++...+.+|++|+|+|+
T Consensus 250 ~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~in 329 (409)
T KOG1838|consen 250 RRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCIN 329 (409)
T ss_pred hHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEe
Confidence 0000000000000 0 00 011244677889999999999
Q ss_pred ecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC---C-c-HHHH-HHHHHHHhcc
Q psy18021 151 GLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC---S-G-YYHT-ISQFLAKAND 206 (230)
Q Consensus 151 g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---~-~-~~~~-i~~fl~~~~~ 206 (230)
+.+|+++|.+. .-..+...+++.-+++...+||..+.+. . . +.+. +.+|+.....
T Consensus 330 a~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 330 AADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred cCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 99999999752 2333334445667777778999887665 2 2 4455 7788876653
No 67
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.61 E-value=6.8e-14 Score=103.95 Aligned_cols=154 Identities=17% Similarity=0.189 Sum_probs=96.7
Q ss_pred EEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcC---CC------------------
Q psy18021 20 HLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGK---SQ------------------ 78 (230)
Q Consensus 20 ~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~---s~------------------ 78 (230)
.++...|.... + .|.||++|+..+-. .....+++.|++.||.|+++|+-+-.. +.
T Consensus 2 ~ay~~~P~~~~-~--~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 2 DAYVARPEGGG-P--RPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEEEEETTSS-S--EEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred eEEEEeCCCCC-C--CCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 45566555541 1 78999999999873 566677888899999999999744333 11
Q ss_pred ------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccc
Q psy18021 79 ------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFC 128 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (230)
||.+++.++... +++++.+...|.
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~----------------------- 131 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGG----------------------- 131 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-S-----------------------
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCC-----------------------
Confidence 555555555443 345555554440
Q ss_pred cccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhC--CCcceEEEeCCCCCCCcCCCC---------cHHHHH
Q psy18021 129 FKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSG--GILKQIVLFESGSHNDTWKCS---------GYYHTI 197 (230)
Q Consensus 129 ~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~~~---------~~~~~i 197 (230)
...........++++|+++++|++|..++.+..+++.+.+. +.+.++++|+|++|....... +.++.+
T Consensus 132 -~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~ 210 (218)
T PF01738_consen 132 -SPPPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRT 210 (218)
T ss_dssp -SSGGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHH
T ss_pred -CCCCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHH
Confidence 01122355678899999999999999999998888888773 236899999999998875432 256778
Q ss_pred HHHHHHh
Q psy18021 198 SQFLAKA 204 (230)
Q Consensus 198 ~~fl~~~ 204 (230)
.+|++++
T Consensus 211 ~~ff~~~ 217 (218)
T PF01738_consen 211 LAFFKRH 217 (218)
T ss_dssp HHHHCC-
T ss_pred HHHHHhc
Confidence 8888765
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.59 E-value=3.5e-14 Score=112.82 Aligned_cols=166 Identities=15% Similarity=0.138 Sum_probs=111.1
Q ss_pred CcEEEEEcCCCCCchhh----HHHHHHhhccCCceEEEEeccCCcCCC--------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHR----LHNVAGLHSMLKCNVLMVEYRGYGKSQ-------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~----~~~~~~~~~~~g~~vi~~d~rG~G~s~-------------------------------- 78 (230)
+++||++||...+...+ ...+++.|.++||+|+++|+||+|.+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 34699999976442111 235667788899999999999999764
Q ss_pred ----cHHHHHHHHhCCCCccccceEEEecCCCCHHHH----------------H-----------HHhhh-hhh----cc
Q psy18021 79 ----GGAVAIDLLARPEYASKIWCLIVENTFTSIPDM----------------A-----------LILLK-WNV----LR 122 (230)
Q Consensus 79 ----Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~----------------~-----------~~~~~-~~~----~~ 122 (230)
||.+++.+++.. |++++++|++++....... . ...+. ... +.
T Consensus 142 GhS~GG~i~~~~~~~~--~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~ 219 (350)
T TIGR01836 142 GICQGGTFSLCYAALY--PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQ 219 (350)
T ss_pred EECHHHHHHHHHHHhC--chheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhH
Confidence 999999988887 7889999998875432100 0 00000 000 00
Q ss_pred ---------ccc----------cccc-------------------ccCc--------ccHHhhhcCCCCEEEEEecCCcc
Q psy18021 123 ---------KMP----------LFCF-------------------KNKF--------LSHWKIERVSNPTFFIVGLNDHL 156 (230)
Q Consensus 123 ---------~~~----------~~~~-------------------~~~~--------~~~~~~~~i~~Pvl~i~g~~D~~ 156 (230)
..+ .|.. .+.. .....+.++++|+++++|++|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i 299 (350)
T TIGR01836 220 KYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHL 299 (350)
T ss_pred HHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCc
Confidence 000 0000 0000 00123667899999999999999
Q ss_pred cChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHH
Q psy18021 157 VPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS----GYYHTISQFLAK 203 (230)
Q Consensus 157 v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~ 203 (230)
+|++.++.+.+.+++.++++++++ +||......+ +++..|.+||.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 300 VPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999886667888887 5787765443 488899999875
No 69
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.59 E-value=5.8e-14 Score=110.43 Aligned_cols=192 Identities=17% Similarity=0.101 Sum_probs=113.9
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
+.+.+++.|+..+ ..+.+++..|.... . .|+||++-|.-+....++..+.+.++.+|+.++++|.||.|.|.
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~~~--p-~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSGEK--P-YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSSSS----EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCCCC--C-CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 4567889999876 77888776555322 1 67888888877776777778888889999999999999999986
Q ss_pred ---------------------------------cHHHHHHHHhCCCCccccceEEEecCCCC-HHHHHHHhhhhhh----
Q psy18021 79 ---------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTS-IPDMALILLKWNV---- 120 (230)
Q Consensus 79 ---------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~---- 120 (230)
||+.|..+|... ++|++++|..++... +-.........+.
T Consensus 238 ~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le--~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d 315 (411)
T PF06500_consen 238 TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE--DPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLD 315 (411)
T ss_dssp -S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT--TTT-SEEEEES---SCGGH-HHHHTTS-HHHHH
T ss_pred CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc--ccceeeEeeeCchHhhhhccHHHHhcCCHHHHH
Confidence 999999999765 689999999888532 1110000000000
Q ss_pred -----cccc--c--ccc-cccCcccHH--hh--hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCC-CC
Q psy18021 121 -----LRKM--P--LFC-FKNKFLSHW--KI--ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGS-HN 185 (230)
Q Consensus 121 -----~~~~--~--~~~-~~~~~~~~~--~~--~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-H~ 185 (230)
+... . .+. .-..|+... .+ .+..+|+|.+.+++|.+.|.+..+-+...-. +.+...++... |.
T Consensus 316 ~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~--~gk~~~~~~~~~~~ 393 (411)
T PF06500_consen 316 VLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST--DGKALRIPSKPLHM 393 (411)
T ss_dssp HHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT--T-EEEEE-SSSHHH
T ss_pred HHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC--CCceeecCCCcccc
Confidence 0000 0 000 001222211 23 5678999999999999999998877766544 35666666433 31
Q ss_pred CcCCCCcHHHHHHHHHHHhc
Q psy18021 186 DTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 186 ~~~~~~~~~~~i~~fl~~~~ 205 (230)
. -++-...+.+||++.+
T Consensus 394 g---y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 394 G---YPQALDEIYKWLEDKL 410 (411)
T ss_dssp H---HHHHHHHHHHHHHHHH
T ss_pred c---hHHHHHHHHHHHHHhc
Confidence 1 1246678899998753
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.58 E-value=2.3e-13 Score=104.60 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=116.8
Q ss_pred CCCCceeEEEEccC-CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHH--HHHHhhccCCceEEEEec--cCCcC
Q psy18021 2 HGLPYESIFVKSLD-GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLH--NVAGLHSMLKCNVLMVEY--RGYGK 76 (230)
Q Consensus 2 ~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~--~~~~~~~~~g~~vi~~d~--rG~G~ 76 (230)
|+-..+..++.+.- +..+.+.++.|+....++ .|+|+++||++++...+.. .+..++++.|+.|+++|. ||+|.
T Consensus 9 ~~~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~-~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~ 87 (275)
T TIGR02821 9 FGGTQGFYRHKSETCGVPMTFGVFLPPQAAAGP-VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGI 87 (275)
T ss_pred cCCEEEEEEEeccccCCceEEEEEcCCCccCCC-CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCC
Confidence 34445556666553 456666666554322222 7899999999988554432 234455667999999998 55431
Q ss_pred C---------------------------C-------------------------------cHHHHHHHHhCCCCccccce
Q psy18021 77 S---------------------------Q-------------------------------GGAVAIDLLARPEYASKIWC 98 (230)
Q Consensus 77 s---------------------------~-------------------------------Gg~~a~~~a~~~~~~~~i~~ 98 (230)
+ . ||.+++.++..+ |+.+++
T Consensus 88 ~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~--p~~~~~ 165 (275)
T TIGR02821 88 AGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN--PDRFKS 165 (275)
T ss_pred CCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC--cccceE
Confidence 0 0 999999999988 899999
Q ss_pred EEEecCCCCHHHHH--HHhhhhhhcccccccccccCcccHHhhh--cCCCCEEEEEecCCcccCh-HHHHHHHHHhCC--
Q psy18021 99 LIVENTFTSIPDMA--LILLKWNVLRKMPLFCFKNKFLSHWKIE--RVSNPTFFIVGLNDHLVPP-SMMVKLHENSGG-- 171 (230)
Q Consensus 99 ~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~Pvl~i~g~~D~~v~~-~~~~~~~~~~~~-- 171 (230)
+++.+|........ ..... ..+...+... ...+....+. ....|+++++|+.|..++. .....+.+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g 242 (275)
T TIGR02821 166 VSAFAPIVAPSRCPWGQKAFS-AYLGADEAAW--RSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAG 242 (275)
T ss_pred EEEECCccCcccCcchHHHHH-HHhcccccch--hhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcC
Confidence 99988875432100 00000 0000000000 0112222222 2467999999999999998 455566655543
Q ss_pred CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 172 ILKQIVLFESGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 172 ~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
.++++..+||++|....... +.....+|..+
T Consensus 243 ~~v~~~~~~g~~H~f~~~~~-~~~~~~~~~~~ 273 (275)
T TIGR02821 243 QALTLRRQAGYDHSYYFIAS-FIADHLRHHAE 273 (275)
T ss_pred CCeEEEEeCCCCccchhHHH-hHHHHHHHHHh
Confidence 24789999999997765433 33334444443
No 71
>PRK11460 putative hydrolase; Provisional
Probab=99.56 E-value=1.6e-13 Score=102.66 Aligned_cols=139 Identities=14% Similarity=0.055 Sum_probs=93.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+||++||++++... +..+.+.+.+.++.+..+.++|...+.
T Consensus 16 ~~~vIlLHG~G~~~~~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 16 QQLLLLFHGVGDNPVA-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CcEEEEEeCCCCChHH-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 6799999999999544 444555666656555555555531100
Q ss_pred ------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhh
Q psy18021 79 ------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIE 140 (230)
Q Consensus 79 ------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (230)
||.+++.++... |..+.+++..++... ......
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~--~~~~~~vv~~sg~~~---------------------------~~~~~~ 145 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAE--PGLAGRVIAFSGRYA---------------------------SLPETA 145 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhC--CCcceEEEEeccccc---------------------------cccccc
Confidence 677776666555 455555555544210 000112
Q ss_pred cCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhcc
Q psy18021 141 RVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAND 206 (230)
Q Consensus 141 ~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~ 206 (230)
....|++++||++|.++|++.++++.+.++. .+++++.+++++|... ++..+.+.+||.+.+.
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~---~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID---PRLMQFALDRLRYTVP 210 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC---HHHHHHHHHHHHHHcc
Confidence 3478999999999999999999999988764 2478889999999653 4566778888887773
No 72
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.55 E-value=1e-12 Score=95.13 Aligned_cols=174 Identities=18% Similarity=0.212 Sum_probs=106.7
Q ss_pred eEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC-cCCC--------
Q psy18021 8 SIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY-GKSQ-------- 78 (230)
Q Consensus 8 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~-G~s~-------- 78 (230)
+..+...+|..+..|...|....++. +++||+..|++..+. .+..++.+|+..||+|+.||.-.| |.|+
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~-~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKR-NNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS----S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCccc-CCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch
Confidence 45678889999999998887766554 789999999998844 456677788899999999999876 7776
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhccc----cc
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRK----MP 125 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~ 125 (230)
.|.+|...++.. .+..+|...+..+++..+........... +|
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp 157 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLP 157 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCC
Confidence 677777777754 58888888899999888877665544331 11
Q ss_pred cc----------------ccccCccc----HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCC
Q psy18021 126 LF----------------CFKNKFLS----HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHN 185 (230)
Q Consensus 126 ~~----------------~~~~~~~~----~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 185 (230)
.- +....|+. ...++++++|++.+++++|..|......++...+.+..++++.++|+.|.
T Consensus 158 ~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 158 EDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred CcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 10 11223433 45678889999999999999999999999999888888999999999996
Q ss_pred Cc
Q psy18021 186 DT 187 (230)
Q Consensus 186 ~~ 187 (230)
..
T Consensus 238 L~ 239 (294)
T PF02273_consen 238 LG 239 (294)
T ss_dssp TT
T ss_pred hh
Confidence 55
No 73
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.51 E-value=1.1e-12 Score=97.36 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=69.9
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcC-CCCEEEEEecCCccc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERV-SNPTFFIVGLNDHLV 157 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~v 157 (230)
||.+++.++..+ |.++.++|..+++.... ... ....... +.|++++||+.|+++
T Consensus 115 Ga~~al~~~l~~--p~~~~gvv~lsG~~~~~---------------------~~~--~~~~~~~~~~pi~~~hG~~D~vv 169 (216)
T PF02230_consen 115 GAAMALYLALRY--PEPLAGVVALSGYLPPE---------------------SEL--EDRPEALAKTPILIIHGDEDPVV 169 (216)
T ss_dssp HHHHHHHHHHCT--SSTSSEEEEES---TTG---------------------CCC--HCCHCCCCTS-EEEEEETT-SSS
T ss_pred HHHHHHHHHHHc--CcCcCEEEEeecccccc---------------------ccc--cccccccCCCcEEEEecCCCCcc
Confidence 999999999998 88999999999854210 000 1111111 789999999999999
Q ss_pred ChHHHHHHHHHhCCC--cceEEEeCCCCCCCcCCCCcHHHHHHHHHHHh
Q psy18021 158 PPSMMVKLHENSGGI--LKQIVLFESGSHNDTWKCSGYYHTISQFLAKA 204 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 204 (230)
|.+.+++..+.+... +++++.+++.||... ++..+.+.+||++.
T Consensus 170 p~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 170 PFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---PEELRDLREFLEKH 215 (216)
T ss_dssp THHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---HHHHHHHHHHHhhh
Confidence 999999988888763 579999999999553 45777899999875
No 74
>PRK10162 acetyl esterase; Provisional
Probab=99.50 E-value=8.8e-12 Score=97.69 Aligned_cols=193 Identities=16% Similarity=0.127 Sum_probs=117.6
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch--hhHHHHHHhhcc-CCceEEEEeccCCcCCC----
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG--HRLHNVAGLHSM-LKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~-~g~~vi~~d~rG~G~s~---- 78 (230)
.+++.+++.+| .+.+.++.|.... .|+||++||++.... ..+..+...+++ .|+.|+++|||...+..
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~~~----~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~ 131 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQPDS----QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQA 131 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCCCC----CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCc
Confidence 56778887776 4667666664332 689999999985432 223333444544 69999999999877654
Q ss_pred --------------------------------cHHHHHHHHhCCC----CccccceEEEecCCCCHHHHHH-Hhhhhhh-
Q psy18021 79 --------------------------------GGAVAIDLLARPE----YASKIWCLIVENTFTSIPDMAL-ILLKWNV- 120 (230)
Q Consensus 79 --------------------------------Gg~~a~~~a~~~~----~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~- 120 (230)
||.+++.++.... .+.++.++|+++|.....+... ......+
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~ 211 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWD 211 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCcc
Confidence 9999988775321 1357899999988765421110 0000000
Q ss_pred ------cccccccccc------cCc-cc-HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCC
Q psy18021 121 ------LRKMPLFCFK------NKF-LS-HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSH 184 (230)
Q Consensus 121 ------~~~~~~~~~~------~~~-~~-~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H 184 (230)
+.++...+.. +.+ .+ ...+...-.|+++++|+.|.+.+ .++.+.+++.. .++++++++|..|
T Consensus 212 ~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H 289 (318)
T PRK10162 212 GLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLH 289 (318)
T ss_pred ccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCce
Confidence 0000000000 011 11 12222234799999999999864 56677776654 3589999999999
Q ss_pred CCcCCCC------cHHHHHHHHHHHhc
Q psy18021 185 NDTWKCS------GYYHTISQFLAKAN 205 (230)
Q Consensus 185 ~~~~~~~------~~~~~i~~fl~~~~ 205 (230)
......+ +.++.+.+||.+.+
T Consensus 290 ~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 290 AFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred ehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 8754322 36677888887765
No 75
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.48 E-value=6.1e-13 Score=100.76 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=77.6
Q ss_pred eEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc---hhhHHHHHHhhccCCceEEEEeccCCcCCC------
Q psy18021 8 SIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI---GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------ 78 (230)
Q Consensus 8 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~---~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------ 78 (230)
.+.++...|... +++..+....+ +|+||++||+++.. ...+..+++.|+++||.|+++|+||||.|.
T Consensus 2 ~~~l~~~~g~~~-~~~~~p~~~~~---~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~ 77 (266)
T TIGR03101 2 PFFLDAPHGFRF-CLYHPPVAVGP---RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAA 77 (266)
T ss_pred CEEecCCCCcEE-EEEecCCCCCC---ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccC
Confidence 456777666645 55555543321 57999999998753 234455667788899999999999999985
Q ss_pred -------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHh
Q psy18021 79 -------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALIL 115 (230)
Q Consensus 79 -------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 115 (230)
||.+++.++..+ |++++++|+.+|..+....++.+
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~--p~~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPL--AAKCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhC--ccccceEEEeccccchHHHHHHH
Confidence 999999999887 88999999999988876666554
No 76
>KOG2100|consensus
Probab=99.47 E-value=2.4e-12 Score=110.54 Aligned_cols=189 Identities=16% Similarity=0.146 Sum_probs=133.3
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc----hhhHHHHHHhhccCCceEEEEeccCCcCCC------------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI----GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------ 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~----~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------ 78 (230)
||....+....|+.-.++++.|++|.+||++++. .....+-.......|+.|+.+|.||.|...
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 7888888888776654444489999999999743 112223333467889999999999988776
Q ss_pred --------------------------------cHHHHHHHHhCCCCc-cccceEEEecCCCCHHHHHHHhhhhhhccccc
Q psy18021 79 --------------------------------GGAVAIDLLARPEYA-SKIWCLIVENTFTSIPDMALILLKWNVLRKMP 125 (230)
Q Consensus 79 --------------------------------Gg~~a~~~a~~~~~~-~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (230)
||.+++.++... + .-+++.+.++|.+++. .....+...++....
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~--~~~~fkcgvavaPVtd~~-~yds~~terymg~p~ 662 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESD--PGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPS 662 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhC--cCceEEEEEEecceeeee-eecccccHhhcCCCc
Confidence 999999999887 6 4566669999988876 433333222211111
Q ss_pred cccc-ccCcccHHhhhcCCCCE-EEEEecCCcccChHHHHHHHHHhCCC--cceEEEeCCCCCCCcCCCC--cHHHHHHH
Q psy18021 126 LFCF-KNKFLSHWKIERVSNPT-FFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLFESGSHNDTWKCS--GYYHTISQ 199 (230)
Q Consensus 126 ~~~~-~~~~~~~~~~~~i~~Pv-l~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~--~~~~~i~~ 199 (230)
.... .........+..++.|. |++||+.|..|+.+++.+++++++.. +.+++++|+..|....... .+...+..
T Consensus 663 ~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~ 742 (755)
T KOG2100|consen 663 ENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDR 742 (755)
T ss_pred cccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHH
Confidence 1110 11122334455555555 99999999999999999999888753 5799999999999887664 58888999
Q ss_pred HHHHhcc
Q psy18021 200 FLAKAND 206 (230)
Q Consensus 200 fl~~~~~ 206 (230)
|+.++..
T Consensus 743 ~~~~~~~ 749 (755)
T KOG2100|consen 743 FLRDCFG 749 (755)
T ss_pred HHHHHcC
Confidence 9996653
No 77
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=9.7e-12 Score=92.93 Aligned_cols=166 Identities=13% Similarity=0.159 Sum_probs=117.0
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC-cCCC-------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY-GKSQ------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~-G~s~------- 78 (230)
+++.+++.| ..+.+++..|....+ .|.||++|+..+- ......+++.++..||.++++|+-+. |.+.
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~~---~P~VIv~hei~Gl-~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~ 77 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAGG---FPGVIVLHEIFGL-NPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPA 77 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCCC---CCEEEEEecccCC-chHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHH
Confidence 567888877 889999988876542 4899999999998 44667777788999999999999653 3332
Q ss_pred --------------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHH
Q psy18021 79 --------------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALI 114 (230)
Q Consensus 79 --------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~ 114 (230)
||.+++.++... | ++++.+...+
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~--~-~v~a~v~fyg---------- 144 (236)
T COG0412 78 ELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA--P-EVKAAVAFYG---------- 144 (236)
T ss_pred HHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc--C-CccEEEEecC----------
Confidence 333333333332 1 3333333222
Q ss_pred hhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCC--cceEEEeCCCCCCCcCCC--
Q psy18021 115 LLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLFESGSHNDTWKC-- 190 (230)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~-- 190 (230)
....+......++++|+|+++|+.|..+|......+.+.+... ..++.+++++.|......
T Consensus 145 ---------------~~~~~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~ 209 (236)
T COG0412 145 ---------------GLIADDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRAD 209 (236)
T ss_pred ---------------CCCCCcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCc
Confidence 1111122335688999999999999999999888888877764 578899999999887542
Q ss_pred --C--------cHHHHHHHHHHHhc
Q psy18021 191 --S--------GYYHTISQFLAKAN 205 (230)
Q Consensus 191 --~--------~~~~~i~~fl~~~~ 205 (230)
. +-|+.+.+|+++.+
T Consensus 210 ~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 210 YHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHhc
Confidence 1 26788999998865
No 78
>PLN00021 chlorophyllase
Probab=99.45 E-value=5.6e-12 Score=97.98 Aligned_cols=173 Identities=12% Similarity=0.012 Sum_probs=111.0
Q ss_pred EEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------------------
Q psy18021 18 KIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------- 78 (230)
Q Consensus 18 ~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------- 78 (230)
.+.+..+.|.... . .|+|||+||++.+ ..++..+.+.++++||.|+++|++|++.+.
T Consensus 38 ~~p~~v~~P~~~g--~-~PvVv~lHG~~~~-~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l 113 (313)
T PLN00021 38 PKPLLVATPSEAG--T-YPVLLFLHGYLLY-NSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGL 113 (313)
T ss_pred CceEEEEeCCCCC--C-CCEEEEECCCCCC-cccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhh
Confidence 3455555443321 1 6899999999988 456777777889999999999998764322
Q ss_pred ----------------------cHHHHHHHHhCCCC---ccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCc
Q psy18021 79 ----------------------GGAVAIDLLARPEY---ASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKF 133 (230)
Q Consensus 79 ----------------------Gg~~a~~~a~~~~~---~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (230)
||.+++.++..... +.++.++|.++|........ ...+..+
T Consensus 114 ~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~---------~~~p~il----- 179 (313)
T PLN00021 114 AAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK---------QTPPPVL----- 179 (313)
T ss_pred hhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc---------CCCCccc-----
Confidence 88888888876621 13678888888754321000 0001111
Q ss_pred ccHHhhhcCCCCEEEEEecCCc---------ccChH-HHHHHHHHhCCCcceEEEeCCCCCCCcCCCC------------
Q psy18021 134 LSHWKIERVSNPTFFIVGLNDH---------LVPPS-MMVKLHENSGGILKQIVLFESGSHNDTWKCS------------ 191 (230)
Q Consensus 134 ~~~~~~~~i~~Pvl~i~g~~D~---------~v~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~------------ 191 (230)
.......++.+|+|++.+..|. +.|.. ...++++..+. ++.+++++++||..+.+..
T Consensus 180 ~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~ 258 (313)
T PLN00021 180 TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA-PAVHFVAKDYGHMDMLDDDTSGIRGKITGCM 258 (313)
T ss_pred ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC-CeeeeeecCCCcceeecCCCccccccccccc
Confidence 1111223378999999999763 23343 33778888776 4888899999998774332
Q ss_pred -----------c-HHHHHHHHHHHhcccCC
Q psy18021 192 -----------G-YYHTISQFLAKANDFLP 209 (230)
Q Consensus 192 -----------~-~~~~i~~fl~~~~~~~~ 209 (230)
+ +...+..||...+....
T Consensus 259 c~~g~~~~~~r~~~~g~~~aFl~~~l~~~~ 288 (313)
T PLN00021 259 CKNGKPRKPMRRFVGGAVVAFLKAYLEGDT 288 (313)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHhcCch
Confidence 1 33467888888875543
No 79
>KOG2382|consensus
Probab=99.44 E-value=2.5e-12 Score=97.46 Aligned_cols=166 Identities=20% Similarity=0.243 Sum_probs=111.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+++++||..++...|...-..+-...+..+++.|.|.||.|+
T Consensus 52 ~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHs 131 (315)
T KOG2382|consen 52 APPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHS 131 (315)
T ss_pred CCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccC
Confidence 78999999999996555554444445567899999999999998
Q ss_pred -cH-HHHHHHHhCCCCccccceEEEe--cCCC------CHHHHHHHhhhhhhc------------------------ccc
Q psy18021 79 -GG-AVAIDLLARPEYASKIWCLIVE--NTFT------SIPDMALILLKWNVL------------------------RKM 124 (230)
Q Consensus 79 -Gg-~~a~~~a~~~~~~~~i~~~i~~--~~~~------~~~~~~~~~~~~~~~------------------------~~~ 124 (230)
|| .+++..+... |..+..+|+. +|.. ...+.+......... .+.
T Consensus 132 mGG~~~~m~~t~~~--p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi 209 (315)
T KOG2382|consen 132 MGGVKVAMAETLKK--PDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFI 209 (315)
T ss_pred cchHHHHHHHHHhc--CcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHH
Confidence 77 5566666665 7888877763 3311 011111111000000 000
Q ss_pred ccccccc-----------------------CcccHHhh--hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEe
Q psy18021 125 PLFCFKN-----------------------KFLSHWKI--ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLF 179 (230)
Q Consensus 125 ~~~~~~~-----------------------~~~~~~~~--~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 179 (230)
..++.+. .......+ .....|||+++|.++.+++.++-.++.+.++ +++++++
T Consensus 210 ~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp--~~e~~~l 287 (315)
T KOG2382|consen 210 LTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP--NVEVHEL 287 (315)
T ss_pred HHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc--chheeec
Confidence 0000000 01111222 4457899999999999999998888888888 5999999
Q ss_pred CCCCCCCcCCCCc-HHHHHHHHHHHh
Q psy18021 180 ESGSHNDTWKCSG-YYHTISQFLAKA 204 (230)
Q Consensus 180 ~~~~H~~~~~~~~-~~~~i~~fl~~~ 204 (230)
+++||+...+.|+ +.+.|.+|+.+.
T Consensus 288 d~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 288 DEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999995 999999998764
No 80
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.41 E-value=1.1e-11 Score=102.13 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=44.2
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
...+.+|++|+++++|++|.++|.+.++.+.+.++ +.+.++++++||....+
T Consensus 408 ~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~--~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 408 RLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG--GPKTFVLGESGHIAGVV 459 (532)
T ss_pred ecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC--CCEEEEECCCCCchHhh
Confidence 45678899999999999999999999999988887 36777899999986533
No 81
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=2e-11 Score=97.70 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=58.9
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCC-CCCCCcCCCCc-HHHHHHHHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFES-GSHNDTWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~-~~H~~~~~~~~-~~~~i~~fl~~ 203 (230)
.+.+.++++|+|+|+|+.|.++|++.++++.+.++. ++.+++++++ +||..+.+.++ +.+.|.+||++
T Consensus 316 ~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 316 EEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 456778999999999999999999999999988863 3589999986 89999998884 88999999875
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.38 E-value=6.9e-12 Score=92.76 Aligned_cols=134 Identities=10% Similarity=-0.011 Sum_probs=82.9
Q ss_pred CcEEEEEcCCCCCchhhH--HHHHHhhccCCceEEEEeccCCcCCC----------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRL--HNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~--~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------- 78 (230)
.|+||++||++++...+. ..+..++.+.||.|+++|+||++.+.
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 92 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSI 92 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCc
Confidence 789999999998754432 12455566789999999999975210
Q ss_pred ------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH--HHHHhhhhhhcccccccccccCcccHHhhhcCCC
Q psy18021 79 ------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD--MALILLKWNVLRKMPLFCFKNKFLSHWKIERVSN 144 (230)
Q Consensus 79 ------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 144 (230)
||.+++.++..+ |+.+.+++..++...... ................+..... ...........
T Consensus 93 d~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p 169 (212)
T TIGR01840 93 DPNRVYVTGLSAGGGMTAVLGCTY--PDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVR-GMQSEYNGPTP 169 (212)
T ss_pred ChhheEEEEECHHHHHHHHHHHhC--chhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHh-ccCCcccCCCC
Confidence 999999999988 888999988877532111 0000000000000000000000 00011122345
Q ss_pred CEEEEEecCCcccChHHHHHHHHHhCC
Q psy18021 145 PTFFIVGLNDHLVPPSMMVKLHENSGG 171 (230)
Q Consensus 145 Pvl~i~g~~D~~v~~~~~~~~~~~~~~ 171 (230)
|++++||++|.+||++.++++.+.+..
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 678999999999999999999888774
No 83
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.38 E-value=3.2e-11 Score=101.30 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=72.4
Q ss_pred EEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch---hhHHHHHHhhccCCceEEEEeccCCcCCC---------
Q psy18021 11 VKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG---HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--------- 78 (230)
Q Consensus 11 ~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~---~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--------- 78 (230)
|++.||.+|.+.++.|.... + .|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.
T Consensus 1 i~~~DG~~L~~~~~~P~~~~--~-~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~ 77 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGG--P-VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSD 77 (550)
T ss_pred CcCCCCCEEEEEEEecCCCC--C-CCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcc
Confidence 35679999998877665422 1 789999999997642 12222345678889999999999999986
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCH
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSI 108 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~ 108 (230)
||.+++.+|... |++++++|..++..+.
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~--~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ--PPALRAIAPQEGVWDL 134 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC--CCceeEEeecCcccch
Confidence 899999999887 7899999998876553
No 84
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.36 E-value=2.7e-12 Score=78.85 Aligned_cols=59 Identities=24% Similarity=0.335 Sum_probs=50.6
Q ss_pred CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCCc
Q psy18021 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQG 79 (230)
Q Consensus 16 g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~G 79 (230)
|.+|.+..+.|++.. +.+|+++||.+.+ ...+..+++.|++.||.|+++|+||||+|.|
T Consensus 1 G~~L~~~~w~p~~~~----k~~v~i~HG~~eh-~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENPP----KAVVVIVHGFGEH-SGRYAHLAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCCC----CEEEEEeCCcHHH-HHHHHHHHHHHHhCCCEEEEECCCcCCCCCC
Confidence 568888888887763 6799999999998 4477788888999999999999999999973
No 85
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.34 E-value=1e-11 Score=96.39 Aligned_cols=169 Identities=20% Similarity=0.255 Sum_probs=93.3
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhh-----------------HHHHHHhhccCCce
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHR-----------------LHNVAGLHSMLKCN 65 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~-----------------~~~~~~~~~~~g~~ 65 (230)
++.-|++.|.+.++..+.+++.-|...+.+ .|+||++||-++..... ...++..|+++||.
T Consensus 85 GY~~EKv~f~~~p~~~vpaylLvPd~~~~p--~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 85 GYTREKVEFNTTPGSRVPAYLLVPDGAKGP--FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp TEEEEEEEE--STTB-EEEEEEEETT--S---EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred CeEEEEEEEEccCCeeEEEEEEecCCCCCC--CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 345688899999998999887766653222 78999999987653210 12346678999999
Q ss_pred EEEEeccCCcCCC------------------------------------------------------------cHHHHHH
Q psy18021 66 VLMVEYRGYGKSQ------------------------------------------------------------GGAVAID 85 (230)
Q Consensus 66 vi~~d~rG~G~s~------------------------------------------------------------Gg~~a~~ 85 (230)
|+++|.+|+|+.. ||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999776 8888888
Q ss_pred HHhCCCCccccceEEEecCCCCHHHHHHHhh--hhh--------hcccccccccccCcccHHhhhcC--CCCEEEEEecC
Q psy18021 86 LLARPEYASKIWCLIVENTFTSIPDMALILL--KWN--------VLRKMPLFCFKNKFLSHWKIERV--SNPTFFIVGLN 153 (230)
Q Consensus 86 ~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~ 153 (230)
+++.. ++|++.|..+-+....+...... ... ...+.|.+.. .++.. .+..+ ..|+|++.|.+
T Consensus 243 LaALD---dRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r--~~D~P-dIasliAPRPll~~nG~~ 316 (390)
T PF12715_consen 243 LAALD---DRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWR--YFDFP-DIASLIAPRPLLFENGGK 316 (390)
T ss_dssp HHHH----TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCC--C--HH-HHHHTTTTS-EEESS-B-
T ss_pred HHHcc---hhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHh--hCccH-HHHHHhCCCcchhhcCCc
Confidence 88887 79988887766555554332211 100 0112222221 12223 33333 67999999999
Q ss_pred CcccChHHHHHHHHHhCCC-cceEEEeCC
Q psy18021 154 DHLVPPSMMVKLHENSGGI-LKQIVLFES 181 (230)
Q Consensus 154 D~~v~~~~~~~~~~~~~~~-~~~~~~~~~ 181 (230)
|++.|. .+..|+....+ +.+.+.+|+
T Consensus 317 Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 317 DKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred ccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 999865 66777776654 678888886
No 86
>KOG2564|consensus
Probab=99.33 E-value=3.6e-11 Score=88.85 Aligned_cols=188 Identities=18% Similarity=0.233 Sum_probs=114.7
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC--------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-------- 78 (230)
+++.+...+. .+..|+..+.... .|++++.||++.+...|.....++..+..++|+++|+||||++.
T Consensus 51 edv~i~~~~~-t~n~Y~t~~~~t~----gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS 125 (343)
T KOG2564|consen 51 EDVSIDGSDL-TFNVYLTLPSATE----GPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLS 125 (343)
T ss_pred cccccCCCcc-eEEEEEecCCCCC----ccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcC
Confidence 4455554443 5666666554332 78999999999997777777777777777899999999999998
Q ss_pred ------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHH----HHhhhhh--hcc
Q psy18021 79 ------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMA----LILLKWN--VLR 122 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~----~~~~~~~--~~~ 122 (230)
||.+|.+.|.....|. +.+++.+.-.....-.+ +.+.... .+.
T Consensus 126 ~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~ 204 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFK 204 (343)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCcccc
Confidence 9999998887765566 88887765432111000 0000000 000
Q ss_pred ccc---cccccc------------------------C-------------ccc-----HHhhhcCCCCEEEEEecCCccc
Q psy18021 123 KMP---LFCFKN------------------------K-------------FLS-----HWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 123 ~~~---~~~~~~------------------------~-------------~~~-----~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
..+ .|..+. . |.. ...+-.+.+|-++|.+..|.+-
T Consensus 205 Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LD 284 (343)
T KOG2564|consen 205 SIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLD 284 (343)
T ss_pred chhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccC
Confidence 000 010000 0 000 1122334677777777776552
Q ss_pred ChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 158 PPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
.--.. -++++ ..++.+++.+||+...+.|. +...+..|..+..
T Consensus 285 kdLti----GQMQG-k~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 285 KDLTI----GQMQG-KFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cceee----eeecc-ceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 21111 11223 47899999999999999995 8888888887643
No 87
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.31 E-value=3e-11 Score=86.90 Aligned_cols=185 Identities=15% Similarity=0.175 Sum_probs=119.2
Q ss_pred eEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------
Q psy18021 8 SIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--------- 78 (230)
Q Consensus 8 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--------- 78 (230)
+..++..||..+.+..++.... .+--|++-|..+....++..++..++++||.|+++||||.|+|.
T Consensus 7 e~~l~~~DG~~l~~~~~pA~~~-----~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~ 81 (281)
T COG4757 7 EAHLPAPDGYSLPGQRFPADGK-----ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQW 81 (281)
T ss_pred ccccccCCCccCccccccCCCC-----CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCcc
Confidence 3678899999999988876654 23356667777776788999999999999999999999999998
Q ss_pred ---------------------------------cHHHHHHHHhCCCCccccceE-EE-----ecCCCCHHHH--------
Q psy18021 79 ---------------------------------GGAVAIDLLARPEYASKIWCL-IV-----ENTFTSIPDM-------- 111 (230)
Q Consensus 79 ---------------------------------Gg~~a~~~a~~~~~~~~i~~~-i~-----~~~~~~~~~~-------- 111 (230)
||.+...+.... +..+. |. .+++....+.
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~----k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 82 RYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHP----KYAAFAVFGSGAGWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred chhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccCc----ccceeeEeccccccccchhhhhcccceeecc
Confidence 444333222221 11111 11 1111111000
Q ss_pred --------HHHhhhhhh-----------------ccccccccccc-C-cccHHhhhcCCCCEEEEEecCCcccChHHHHH
Q psy18021 112 --------ALILLKWNV-----------------LRKMPLFCFKN-K-FLSHWKIERVSNPTFFIVGLNDHLVPPSMMVK 164 (230)
Q Consensus 112 --------~~~~~~~~~-----------------~~~~~~~~~~~-~-~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~ 164 (230)
....+.+.. +...+.+...+ . ....+..+++.+|++++...+|+.+|+...+.
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~ 237 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDA 237 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHH
Confidence 000111110 01111111100 1 11345667889999999999999999999999
Q ss_pred HHHHhCCCcceEEEeCCC----CCCCcCCCC-c-HHHHHHHHH
Q psy18021 165 LHENSGGILKQIVLFESG----SHNDTWKCS-G-YYHTISQFL 201 (230)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~----~H~~~~~~~-~-~~~~i~~fl 201 (230)
+.+...+.+.++..++.+ ||+..+.++ | .++.+.+|+
T Consensus 238 f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 238 FASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999888766788888754 999888776 4 788887775
No 88
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.30 E-value=4e-12 Score=94.78 Aligned_cols=60 Identities=27% Similarity=0.352 Sum_probs=51.2
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTI 197 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i 197 (230)
...+.++++|+++++|++|.++|++.+..+.+.++ +.++++++++||+...+.++ +.+.|
T Consensus 168 ~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 168 SPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP--NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST--TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC--CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 44567899999999999999999999999888887 48999999999999988875 54444
No 89
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.29 E-value=8.7e-11 Score=104.99 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=58.4
Q ss_pred hhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceE-EEeCCCCCCCcCCCC----cHHHHHHHHHHHhcccCC
Q psy18021 138 KIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQI-VLFESGSHNDTWKCS----GYYHTISQFLAKANDFLP 209 (230)
Q Consensus 138 ~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~----~~~~~i~~fl~~~~~~~~ 209 (230)
.++++++|+|+|+|++|.++|++.++.+.+.+++ .++ .+++++||..+.... ++|..|.+||.+..+.-.
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~--a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~~ 366 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN--AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDGD 366 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCCC
Confidence 4678899999999999999999999999988874 666 577899999876543 589999999998775433
No 90
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.29 E-value=2.4e-10 Score=85.11 Aligned_cols=157 Identities=14% Similarity=0.182 Sum_probs=102.5
Q ss_pred eeEEEEccCCC--EEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------
Q psy18021 7 ESIFVKSLDGT--KIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------ 78 (230)
Q Consensus 7 ~~~~~~~~dg~--~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------ 78 (230)
..+.+...+|. ++.+.+......... ..+||-+||-+++ ...+..+...|.+.|+++|.++|||+|.+.
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~~gs~--~gTVv~~hGsPGS-H~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~ 83 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLPSGSP--LGTVVAFHGSPGS-HNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ 83 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCCCCCC--ceeEEEecCCCCC-ccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc
Confidence 44566666664 455555543322111 5689999999999 445667777889999999999999999988
Q ss_pred ------------------------------cHHHHHHHHhCCCCccccceEEEecCCCC-------H-H--HHHHHhhh-
Q psy18021 79 ------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTS-------I-P--DMALILLK- 117 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~-------~-~--~~~~~~~~- 117 (230)
|+-.|+.++... +..++++++|.-- . . ......+.
T Consensus 84 ~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~----~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~ 159 (297)
T PF06342_consen 84 YTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTH----PLHGLVLINPPGLRPHKGIRPLSRMETINYLYDL 159 (297)
T ss_pred cChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcC----ccceEEEecCCccccccCcCHHHHHHHHHHHHHH
Confidence 999999999988 4679999888421 0 0 00111100
Q ss_pred ----------hhhcccccc-----------------cccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhC
Q psy18021 118 ----------WNVLRKMPL-----------------FCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSG 170 (230)
Q Consensus 118 ----------~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~ 170 (230)
+..++.+.. ..+.......+.+++-++|+++++|.+|.++..+-+.++.+.+.
T Consensus 160 lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 160 LPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 000000000 00001122345566667999999999999999888888877665
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.28 E-value=1.1e-10 Score=82.92 Aligned_cols=141 Identities=17% Similarity=0.208 Sum_probs=91.6
Q ss_pred EEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------cHHHHHHHH-h
Q psy18021 38 LVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------GGAVAIDLL-A 88 (230)
Q Consensus 38 vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------Gg~~a~~~a-~ 88 (230)
|+++||++++. .+|+..+.+.+... ++|-.+++ ..+ |+.+++.++ .
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----~~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~ 75 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----DNPDLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAE 75 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------TS--HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----CCCCHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhh
Confidence 68999999985 56888888888776 77777777 121 999999988 5
Q ss_pred CCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHH
Q psy18021 89 RPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN 168 (230)
Q Consensus 89 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~ 168 (230)
.. ..+|.++++++|+..-. .....+... .+... ....+.+|.+++.+++|+++|++.++++.+.
T Consensus 76 ~~--~~~v~g~lLVAp~~~~~----------~~~~~~~~~---~f~~~-p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 76 QS--QKKVAGALLVAPFDPDD----------PEPFPPELD---GFTPL-PRDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp TC--CSSEEEEEEES--SCGC----------HHCCTCGGC---CCTTS-HCCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred cc--cccccEEEEEcCCCccc----------ccchhhhcc---ccccC-cccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 44 78999999999976530 000111100 11111 1123356779999999999999999999999
Q ss_pred hCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 169 SGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 169 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
+. .+++.++++||+...+.-.-+..+.+.|+
T Consensus 140 l~---a~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 140 LG---AELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp HT----EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred cC---CCeEECCCCCCcccccCCCchHHHHHHhc
Confidence 98 89999999999776554344555555554
No 92
>KOG2281|consensus
Probab=99.26 E-value=2.1e-10 Score=93.55 Aligned_cols=193 Identities=16% Similarity=0.060 Sum_probs=131.5
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch--hhH----HHHHHhhccCCceEEEEeccCCcCCC--
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG--HRL----HNVAGLHSMLKCNVLMVEYRGYGKSQ-- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~----~~~~~~~~~~g~~vi~~d~rG~G~s~-- 78 (230)
|-+.|++..|..+++..+.|.+.++.++.|+|+++-|+++-+. ..+ ..--..|+..||.|+.+|.||.-...
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 4467788778999999998887665444899999999997641 111 11122468899999999999976555
Q ss_pred -------------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHh
Q psy18021 79 -------------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALIL 115 (230)
Q Consensus 79 -------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 115 (230)
||++++....++ |+-.+..|.-+|.+.+.- ....
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~--P~IfrvAIAGapVT~W~~-YDTg 770 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY--PNIFRVAIAGAPVTDWRL-YDTG 770 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC--cceeeEEeccCcceeeee-eccc
Confidence 999999999999 888888888888765421 1111
Q ss_pred hhhhhccccc-----ccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcC
Q psy18021 116 LKWNVLRKMP-----LFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTW 188 (230)
Q Consensus 116 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~ 188 (230)
+....+ .+| .+...+.....+.+.+-...+|++||--|+.|...+...+...+-. ...++++||+-.|..-.
T Consensus 771 YTERYM-g~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~ 849 (867)
T KOG2281|consen 771 YTERYM-GYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN 849 (867)
T ss_pred chhhhc-CCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC
Confidence 110000 111 0000011111333444456799999999999999888888776643 25899999999998775
Q ss_pred CCC-c-HHHHHHHHHHH
Q psy18021 189 KCS-G-YYHTISQFLAK 203 (230)
Q Consensus 189 ~~~-~-~~~~i~~fl~~ 203 (230)
.+. . +...+..|+.+
T Consensus 850 ~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 850 PESGIYYEARLLHFLQE 866 (867)
T ss_pred CccchhHHHHHHHHHhh
Confidence 554 3 66778888865
No 93
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.22 E-value=6.2e-10 Score=83.89 Aligned_cols=162 Identities=22% Similarity=0.282 Sum_probs=104.1
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhh--ccCCceEEEEeccCCcCC---C-----------------------------cHH
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLH--SMLKCNVLMVEYRGYGKS---Q-----------------------------GGA 81 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~--~~~g~~vi~~d~rG~G~s---~-----------------------------Gg~ 81 (230)
|.|+++||++++...+........ ... |+++.+|+||||.| . ||.
T Consensus 22 ~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 100 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGA 100 (282)
T ss_pred CeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEecccHH
Confidence 379999999998655555222222 222 99999999999998 2 999
Q ss_pred HHHHHHhCCCCccccceEEEecCCCC------------H----HHHHH---Hh--h------hhh-hcccccc-----cc
Q psy18021 82 VAIDLLARPEYASKIWCLIVENTFTS------------I----PDMAL---IL--L------KWN-VLRKMPL-----FC 128 (230)
Q Consensus 82 ~a~~~a~~~~~~~~i~~~i~~~~~~~------------~----~~~~~---~~--~------~~~-~~~~~~~-----~~ 128 (230)
+++.++... |.++.++|++++... . ..... .. . ... ....... ..
T Consensus 101 ~~~~~~~~~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T COG0596 101 VALALALRH--PDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLA 178 (282)
T ss_pred HHHHHHHhc--chhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhccc
Confidence 999999998 889999999886432 0 00000 00 0 000 0000000 00
Q ss_pred c--c------------------------cCc--ccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeC
Q psy18021 129 F--K------------------------NKF--LSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFE 180 (230)
Q Consensus 129 ~--~------------------------~~~--~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 180 (230)
. . ... .....+..+++|+++++|++|.+.|......+.+..+. ..++.+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~~ 257 (282)
T COG0596 179 EALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVIP 257 (282)
T ss_pred cccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEeC
Confidence 0 0 000 11234566689999999999977776665666666653 37999999
Q ss_pred CCCCCCcCCCCc-HHHHHHHHH
Q psy18021 181 SGSHNDTWKCSG-YYHTISQFL 201 (230)
Q Consensus 181 ~~~H~~~~~~~~-~~~~i~~fl 201 (230)
++||....+.++ +.+.+.+|+
T Consensus 258 ~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 258 GAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred CCCCcchhhcHHHHHHHHHHHH
Confidence 999999999885 666666643
No 94
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.21 E-value=7.5e-10 Score=85.03 Aligned_cols=166 Identities=12% Similarity=0.120 Sum_probs=96.7
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHH---HHHH------hhccCCceEEEEeccCCcCCC-------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLH---NVAG------LHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~---~~~~------~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
||++|.+..+.| .....++.|+||..|+++........ .... .|+++||.|+..|.||.|.|.
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC
Confidence 789999977766 11111127999999999976311111 1111 278899999999999999998
Q ss_pred -------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHH----------------H
Q psy18021 79 -------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPD----------------M 111 (230)
Q Consensus 79 -------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~----------------~ 111 (230)
+|.+++.+|+.. |+.+++++...+..+..+ .
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~--~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w 157 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR--PPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGW 157 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT---TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC--CCCceEEEecccCCcccccchhcCCcccccchhHH
Confidence 788888888877 889999998766433100 0
Q ss_pred --HHHh---hh-h-------------------hhcccc-------ccccccc-------CcccHHhhhcCCCCEEEEEec
Q psy18021 112 --ALIL---LK-W-------------------NVLRKM-------PLFCFKN-------KFLSHWKIERVSNPTFFIVGL 152 (230)
Q Consensus 112 --~~~~---~~-~-------------------~~~~~~-------~~~~~~~-------~~~~~~~~~~i~~Pvl~i~g~ 152 (230)
.... .. . ...... ..+.... ..+....+.++++|+|++.|-
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw 237 (272)
T PF02129_consen 158 EDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGW 237 (272)
T ss_dssp HHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEET
T ss_pred HHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEeccc
Confidence 0000 00 0 000000 0000000 112234568999999999999
Q ss_pred CCcccChHHHHHHHHHhCCCc-c--eEEEeCCCCCC
Q psy18021 153 NDHLVPPSMMVKLHENSGGIL-K--QIVLFESGSHN 185 (230)
Q Consensus 153 ~D~~v~~~~~~~~~~~~~~~~-~--~~~~~~~~~H~ 185 (230)
.|.... ..+.+.++.+..+. . ++++-| .+|.
T Consensus 238 ~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 238 YDTLFL-RGALRAYEALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp TCSSTS-HHHHHHHHHHCTTSTC-EEEEEES-ESTT
T ss_pred CCcccc-hHHHHHHHHhhcCCCCCCEEEEeC-CCCC
Confidence 997766 77888888888753 2 666555 4674
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.18 E-value=3.3e-10 Score=82.37 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=65.1
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVP 158 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~ 158 (230)
|+.+++.+.... +..++++|+.+|.... .....-..-..|++++||+.|+++|
T Consensus 109 GA~ial~~~l~~--~~~~~~ail~~g~~~~-------------------------~~~~~~~~~~~pill~hG~~Dpvvp 161 (207)
T COG0400 109 GANIALSLGLTL--PGLFAGAILFSGMLPL-------------------------EPELLPDLAGTPILLSHGTEDPVVP 161 (207)
T ss_pred HHHHHHHHHHhC--chhhccchhcCCcCCC-------------------------CCccccccCCCeEEEeccCcCCccC
Confidence 777777766666 6667777766663211 0111111236899999999999999
Q ss_pred hHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHh
Q psy18021 159 PSMMVKLHENSGG--ILKQIVLFESGSHNDTWKCSGYYHTISQFLAKA 204 (230)
Q Consensus 159 ~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 204 (230)
...+.++.+.+.+ .+++...++ +||... ++..+.+.+|+...
T Consensus 162 ~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~wl~~~ 205 (207)
T COG0400 162 LALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSWLANT 205 (207)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHHHHhc
Confidence 9999888887764 357888888 799543 34567788888764
No 96
>KOG3043|consensus
Probab=99.16 E-value=5.1e-10 Score=80.28 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=57.1
Q ss_pred cccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCc---ceEEEeCCCCCCCcC-----CCC-------cHHHHH
Q psy18021 133 FLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGIL---KQIVLFESGSHNDTW-----KCS-------GYYHTI 197 (230)
Q Consensus 133 ~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~-----~~~-------~~~~~i 197 (230)
+.....+.++++|+|++.|+.|.++|++...++-+.++... .++.+|++.+|.... ..| +.++.+
T Consensus 154 ~~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~ 233 (242)
T KOG3043|consen 154 FVDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRF 233 (242)
T ss_pred cCChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHH
Confidence 34477889999999999999999999999988888887642 379999999998773 122 245667
Q ss_pred HHHHHHhc
Q psy18021 198 SQFLAKAN 205 (230)
Q Consensus 198 ~~fl~~~~ 205 (230)
..|+.+.+
T Consensus 234 ~~Wf~~y~ 241 (242)
T KOG3043|consen 234 ISWFKHYL 241 (242)
T ss_pred HHHHHHhh
Confidence 77877654
No 97
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.13 E-value=2.1e-09 Score=92.89 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=105.5
Q ss_pred HHHHhhccCCceEEEEeccCCcCCC-----------------------------------------------------cH
Q psy18021 54 NVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------------------------------GG 80 (230)
Q Consensus 54 ~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------------------------------Gg 80 (230)
.+.++|..+||.|+..|.||.|.|. ||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4556788999999999999999998 68
Q ss_pred HHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhh------hhh----------h----------ccccc---------
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENTFTSIPDMALILL------KWN----------V----------LRKMP--------- 125 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~------~~~----------~----------~~~~~--------- 125 (230)
.+++.+|... ++.++++|..++..+..+.....- .+. . ....+
T Consensus 350 ~~~~~aAa~~--pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 427 (767)
T PRK05371 350 TLPNAVATTG--VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAEL 427 (767)
T ss_pred HHHHHHHhhC--CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhh
Confidence 8888888877 789999999988877654332200 000 0 00000
Q ss_pred -ccccc---------cCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCCC--
Q psy18021 126 -LFCFK---------NKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKCS-- 191 (230)
Q Consensus 126 -~~~~~---------~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~-- 191 (230)
.+... ...+....+.++++|+|++||..|..+++.++.+++++++. .++++++.+ .+|.......
T Consensus 428 ~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~ 506 (767)
T PRK05371 428 TAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSI 506 (767)
T ss_pred hhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHH
Confidence 00000 01123456678999999999999999999999999988863 246776655 5786544333
Q ss_pred cHHHHHHHHHHHhcccCC
Q psy18021 192 GYYHTISQFLAKANDFLP 209 (230)
Q Consensus 192 ~~~~~i~~fl~~~~~~~~ 209 (230)
++.+.+.+|++..+....
T Consensus 507 d~~e~~~~Wfd~~LkG~~ 524 (767)
T PRK05371 507 DFRDTMNAWFTHKLLGID 524 (767)
T ss_pred HHHHHHHHHHHhccccCC
Confidence 578889999999886543
No 98
>KOG2624|consensus
Probab=99.13 E-value=1.8e-09 Score=85.80 Aligned_cols=197 Identities=21% Similarity=0.197 Sum_probs=130.7
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHH-----HHHHhhccCCceEEEEeccCCcC
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLH-----NVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~-----~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
+|++.|+..+.|.||..|....++..+.+ +|+|++.||...+...|.. .++-.|+++||.|..-+.||...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~----rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~y 119 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKK----RPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTY 119 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCC----CCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCccc
Confidence 57889999999999998887777766522 8999999999988654443 35666899999999999999766
Q ss_pred CC-------------------------------------------------cHHHHHHHHhCC-CCccccceEEEecCCC
Q psy18021 77 SQ-------------------------------------------------GGAVAIDLLARP-EYASKIWCLIVENTFT 106 (230)
Q Consensus 77 s~-------------------------------------------------Gg~~a~~~a~~~-~~~~~i~~~i~~~~~~ 106 (230)
|. |+.+...+++.. +...+|+.+++.+|..
T Consensus 120 Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 120 SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 65 666666655554 1245799999999865
Q ss_pred CHH---HH--------------HHHhhhhhhcccccc----------ccc------------------------------
Q psy18021 107 SIP---DM--------------ALILLKWNVLRKMPL----------FCF------------------------------ 129 (230)
Q Consensus 107 ~~~---~~--------------~~~~~~~~~~~~~~~----------~~~------------------------------ 129 (230)
... .. ....+.. ...++. .+.
T Consensus 200 ~~k~~~~~~~~~~~~~~~~~~~~~~~fg~--~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~ 277 (403)
T KOG2624|consen 200 FPKHIKSLLNKFLDPFLGAFSLLPLLFGR--KEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLP 277 (403)
T ss_pred hhcccccHHHHhhhhhhhhhhHHHHhcCC--ccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccc
Confidence 322 00 0000000 000000 000
Q ss_pred -----------------------------------------ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHH
Q psy18021 130 -----------------------------------------KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN 168 (230)
Q Consensus 130 -----------------------------------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~ 168 (230)
.....+.-.+.++++|+.+.+|++|.++.++.++.+...
T Consensus 278 ~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~ 357 (403)
T KOG2624|consen 278 VYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLV 357 (403)
T ss_pred hhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHh
Confidence 000122345677899999999999999999999988888
Q ss_pred hCCCcc-eEEEeCCCCCCCcCCCC----cHHHHHHHHHHHh
Q psy18021 169 SGGILK-QIVLFESGSHNDTWKCS----GYYHTISQFLAKA 204 (230)
Q Consensus 169 ~~~~~~-~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~ 204 (230)
+..... ..+.+++=.|..+.-.. ++.+.|.+.+.+.
T Consensus 358 ~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 358 LPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred cccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 875422 22236888898875443 3556666666543
No 99
>KOG1515|consensus
Probab=99.09 E-value=1.3e-08 Score=79.37 Aligned_cols=190 Identities=19% Similarity=0.173 Sum_probs=115.0
Q ss_pred EccCCCEEEEEEecCCCccc-CCCCcEEEEEcCCCCCch----hhHH-HHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 12 KSLDGTKIHLYFIPQPDVKA-KCETMTLVYLHGNAGNIG----HRLH-NVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 12 ~~~dg~~l~~~~~~~~~~~~-~~~~p~vv~~HG~~~~~~----~~~~-~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
.......+..+++.|..... +. .|+|||+||++.... ..++ .......+.++.|+++|||-.-+..
T Consensus 67 ~~~~~~~l~vRly~P~~~~~~~~-~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D 145 (336)
T KOG1515|consen 67 TIDPFTNLPVRLYRPTSSSSETK-LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDD 145 (336)
T ss_pred EecCCCCeEEEEEcCCCCCcccC-ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchH
Confidence 33344556667777666554 33 899999999996542 2333 3333346779999999999766665
Q ss_pred ------------------------------cHHHHHHHHhCCC----CccccceEEEecCCCCHHHHHHH----------
Q psy18021 79 ------------------------------GGAVAIDLLARPE----YASKIWCLIVENTFTSIPDMALI---------- 114 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~----~~~~i~~~i~~~~~~~~~~~~~~---------- 114 (230)
||.+|..++.+.. .+.++++.|++.|+....+....
T Consensus 146 ~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~ 225 (336)
T KOG1515|consen 146 GWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSP 225 (336)
T ss_pred HHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCc
Confidence 9999887775432 25789999999997653221111
Q ss_pred -----hhhhhhcccccccc--cccCcc-cH-----HhhhcCC-CCEEEEEecCCcccChHHHHHHHHHhCCC--cceEEE
Q psy18021 115 -----LLKWNVLRKMPLFC--FKNKFL-SH-----WKIERVS-NPTFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVL 178 (230)
Q Consensus 115 -----~~~~~~~~~~~~~~--~~~~~~-~~-----~~~~~i~-~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~ 178 (230)
.....+...+|.-. ....+- +. ....-.. .|++++.++.|.+. +....+.+++++. ..++..
T Consensus 226 ~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~ 303 (336)
T KOG1515|consen 226 ELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIH 303 (336)
T ss_pred chhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEE
Confidence 11111111222111 111111 11 1122223 45999999999886 5556666666653 456667
Q ss_pred eCCCCCCCcCCCC------cHHHHHHHHHHHh
Q psy18021 179 FESGSHNDTWKCS------GYYHTISQFLAKA 204 (230)
Q Consensus 179 ~~~~~H~~~~~~~------~~~~~i~~fl~~~ 204 (230)
++++.|......+ +..+.+.+|+++.
T Consensus 304 ~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 304 YEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 8999998764433 3667778887753
No 100
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.00 E-value=5.1e-08 Score=76.45 Aligned_cols=183 Identities=15% Similarity=0.099 Sum_probs=107.6
Q ss_pred CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc---hhhHHHHHHhhccCCceEEEEeccCCcCCC--------------
Q psy18021 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI---GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-------------- 78 (230)
Q Consensus 16 g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~---~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-------------- 78 (230)
+..+.+..+.+....... .|+||++||++... .........++...|+.|+++|||-..+..
T Consensus 61 ~~~~~~~~y~p~~~~~~~-~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~ 139 (312)
T COG0657 61 GDGVPVRVYRPDRKAAAT-APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRW 139 (312)
T ss_pred CCceeEEEECCCCCCCCC-CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHH
Confidence 333555555551111112 78999999999764 233356666778899999999999765554
Q ss_pred ----------------------cHHHHHHHHhCCCC--ccccceEEEecCCCCHHHH---HHHh-----------hhhhh
Q psy18021 79 ----------------------GGAVAIDLLARPEY--ASKIWCLIVENTFTSIPDM---ALIL-----------LKWNV 120 (230)
Q Consensus 79 ----------------------Gg~~a~~~a~~~~~--~~~i~~~i~~~~~~~~~~~---~~~~-----------~~~~~ 120 (230)
||++++.++..... .....+.++++|..+.... .... ..+..
T Consensus 140 l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (312)
T COG0657 140 LRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFA 219 (312)
T ss_pred HHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHH
Confidence 99999987765521 2367888999997665430 0000 00000
Q ss_pred ccccccccc-cc-CcccH--HhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCC-Cc-
Q psy18021 121 LRKMPLFCF-KN-KFLSH--WKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKC-SG- 192 (230)
Q Consensus 121 ~~~~~~~~~-~~-~~~~~--~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~-~~- 192 (230)
..+...... .+ ...+. ..+.. -.|+++++|+.|.+.+ +.+.+.+++.. ..++++.+++..|...... ++
T Consensus 220 ~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a 296 (312)
T COG0657 220 DLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEA 296 (312)
T ss_pred HHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHH
Confidence 011110000 00 01111 11333 5789999999999988 55566665554 3578899999999664333 32
Q ss_pred --HHHHHHHHHH
Q psy18021 193 --YYHTISQFLA 202 (230)
Q Consensus 193 --~~~~i~~fl~ 202 (230)
-+..+.+|+.
T Consensus 297 ~~~~~~~~~~l~ 308 (312)
T COG0657 297 RSALRQIAAFLR 308 (312)
T ss_pred HHHHHHHHHHHH
Confidence 3345555554
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.96 E-value=1e-08 Score=73.66 Aligned_cols=153 Identities=14% Similarity=0.103 Sum_probs=94.7
Q ss_pred EEEEcCCCCCchh-hHHHHHHhhccCC--ceEEEEeccCCc-----------------------CCCcHHHHHHHHhCCC
Q psy18021 38 LVYLHGNAGNIGH-RLHNVAGLHSMLK--CNVLMVEYRGYG-----------------------KSQGGAVAIDLLARPE 91 (230)
Q Consensus 38 vv~~HG~~~~~~~-~~~~~~~~~~~~g--~~vi~~d~rG~G-----------------------~s~Gg~~a~~~a~~~~ 91 (230)
||++||+.++... ....+.+.+++.+ ..+..+|++-+- .|-||..|..++..+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~- 80 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERY- 80 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHh-
Confidence 8999999998643 3445555666654 467777776432 122999999999887
Q ss_pred CccccceEEEecCCCCHHHHHHHhhhhhhccccc-ccccc-cCcccHHhh----hcCCCCEEEEEecCCcccChHHHHHH
Q psy18021 92 YASKIWCLIVENTFTSIPDMALILLKWNVLRKMP-LFCFK-NKFLSHWKI----ERVSNPTFFIVGLNDHLVPPSMMVKL 165 (230)
Q Consensus 92 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~----~~i~~Pvl~i~g~~D~~v~~~~~~~~ 165 (230)
.+++ |+++|.......+....+........ .+... ........+ ..-..++++++++.|+++++..+...
T Consensus 81 ---~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~ 156 (187)
T PF05728_consen 81 ---GLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAK 156 (187)
T ss_pred ---CCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHHHH
Confidence 4455 88899888888777666543222111 11111 111111111 12246899999999999999666554
Q ss_pred HHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHH
Q psy18021 166 HENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFL 201 (230)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl 201 (230)
+ .+ ...++.+|++|.... -.+....|.+|+
T Consensus 157 ~---~~--~~~~i~~ggdH~f~~-f~~~l~~i~~f~ 186 (187)
T PF05728_consen 157 Y---RG--CAQIIEEGGDHSFQD-FEEYLPQIIAFL 186 (187)
T ss_pred h---cC--ceEEEEeCCCCCCcc-HHHHHHHHHHhh
Confidence 4 32 444566788996653 224666677775
No 102
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.94 E-value=4.9e-08 Score=72.96 Aligned_cols=141 Identities=13% Similarity=0.060 Sum_probs=95.7
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
.|+|||+||+... ..+|..+.+.++.+||.|+.+|+...+...
T Consensus 17 yPVv~f~~G~~~~-~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 17 YPVVLFLHGFLLI-NSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred cCEEEEeCCcCCC-HHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 8999999999954 677888888999999999999955433221
Q ss_pred -----cHHHHHHHHhCCCC---ccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEE
Q psy18021 79 -----GGAVAIDLLARPEY---ASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIV 150 (230)
Q Consensus 79 -----Gg~~a~~~a~~~~~---~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~ 150 (230)
||-+|..++..... +.+++++|++.|+...... .+..|.. +.....--+.+.|+++|-
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~---------~~~~P~v-----~~~~p~s~~~~~P~lviG 161 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG---------SQTEPPV-----LTYTPQSFDFSMPALVIG 161 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc---------cCCCCcc-----ccCcccccCCCCCeEEEe
Confidence 89998887776522 3579999999997632111 0011111 111111223569999998
Q ss_pred ecCCc---------ccCh-HHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC
Q psy18021 151 GLNDH---------LVPP-SMMVKLHENSGGILKQIVLFESGSHNDTWKCS 191 (230)
Q Consensus 151 g~~D~---------~v~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 191 (230)
..-+. .+|. ...+++++..+.+ .-.++.++.||+.+.+..
T Consensus 162 tGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 162 TGLGGEPRNPLFPPCAPAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred cccCcccccccCCCCCCCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCC
Confidence 77664 3443 4557788888765 666778899999876654
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.90 E-value=8.6e-08 Score=65.41 Aligned_cols=128 Identities=18% Similarity=0.158 Sum_probs=84.9
Q ss_pred cEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 36 MTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 36 p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
-+||+-||.+.+.. ......+..++.+|+.|..|+++..-...
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 47899999999874 35667777889999999999986432111
Q ss_pred ----cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCC
Q psy18021 79 ----GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLND 154 (230)
Q Consensus 79 ----Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 154 (230)
||.++...+... ...|+++++.+=. +.+ ..+....-.+.+..++.|++|.+|+.|
T Consensus 95 GkSmGGR~aSmvade~--~A~i~~L~clgYP-----------------fhp--pGKPe~~Rt~HL~gl~tPtli~qGtrD 153 (213)
T COG3571 95 GKSMGGRVASMVADEL--QAPIDGLVCLGYP-----------------FHP--PGKPEQLRTEHLTGLKTPTLITQGTRD 153 (213)
T ss_pred cccccchHHHHHHHhh--cCCcceEEEecCc-----------------cCC--CCCcccchhhhccCCCCCeEEeecccc
Confidence 666666655554 3346666664310 000 000011124567788999999999999
Q ss_pred cccChHHHHHHHHHhCCCcceEEEeCCCCCCCc
Q psy18021 155 HLVPPSMMVKLHENSGGILKQIVLFESGSHNDT 187 (230)
Q Consensus 155 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 187 (230)
++-.-+++. ...-+...++++++++.|..-
T Consensus 154 ~fGtr~~Va---~y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 154 EFGTRDEVA---GYALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred cccCHHHHH---hhhcCCceEEEEeccCccccc
Confidence 998776652 222234599999999999764
No 104
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.90 E-value=1.6e-08 Score=74.68 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=84.3
Q ss_pred EEEEcCCCCCch---hhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 38 LVYLHGNAGNIG---HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 38 vv~~HG~~~~~~---~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
||++||++.... ........+..+.|+.|+.+|||-..+..
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 799999997642 23344444444589999999999876655
Q ss_pred cHHHHHHHHhCCCCc--cccceEEEecCCCCH-----HHHH--HHhhhhhhc-----cccccccc-----cc-CcccHHh
Q psy18021 79 GGAVAIDLLARPEYA--SKIWCLIVENTFTSI-----PDMA--LILLKWNVL-----RKMPLFCF-----KN-KFLSHWK 138 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~--~~i~~~i~~~~~~~~-----~~~~--~~~~~~~~~-----~~~~~~~~-----~~-~~~~~~~ 138 (230)
||.+++.++...... ..++++++++|..++ .... ......... ..+..... .. ..++...
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 160 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNA 160 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGS
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999888654221 358999999997654 1111 111110000 00000000 00 1111211
Q ss_pred --hhcCCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCC
Q psy18021 139 --IERVSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHND 186 (230)
Q Consensus 139 --~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~ 186 (230)
++. -.|+++++|+.|.++ ..+..+.++++. .++++++++++.|..
T Consensus 161 ~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 161 SDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp SCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 111 358999999999876 456677776664 357999999999965
No 105
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.83 E-value=1.2e-07 Score=75.86 Aligned_cols=66 Identities=14% Similarity=0.129 Sum_probs=55.8
Q ss_pred hhhcCC-CCEEEEEecCCcccChHHHHHHHHHh---CCCcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHH
Q psy18021 138 KIERVS-NPTFFIVGLNDHLVPPSMMVKLHENS---GGILKQIVLFESGSHNDTWKCS----GYYHTISQFLAK 203 (230)
Q Consensus 138 ~~~~i~-~Pvl~i~g~~D~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~ 203 (230)
.+++|+ +|+|.+.|++|.++|+..++.+.+.. ++.+++.+..+++||...+... +++..|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 467888 99999999999999999999998874 5556778888899999887665 477889999875
No 106
>KOG4627|consensus
Probab=98.81 E-value=3e-08 Score=70.42 Aligned_cols=151 Identities=13% Similarity=0.158 Sum_probs=100.4
Q ss_pred CcEEEEEcCCCCCchh--hHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------c
Q psy18021 35 TMTLVYLHGNAGNIGH--RLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------G 79 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~--~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------G 79 (230)
.|..||+||+-+-... +.-..+..+.++||+|...+|--+.+-. |
T Consensus 67 ~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaG 146 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAG 146 (270)
T ss_pred ccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchH
Confidence 5799999999865322 2222333456789999998875544442 7
Q ss_pred HHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccCh
Q psy18021 80 GAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPP 159 (230)
Q Consensus 80 g~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~ 159 (230)
+.+|+.+..+.+ .++|.++++.++.-.+++.......... . +..-....--.....+..++.|+|++.++.|.---+
T Consensus 147 AHLa~qav~R~r-~prI~gl~l~~GvY~l~EL~~te~g~dl-g-Lt~~~ae~~Scdl~~~~~v~~~ilVv~~~~espkli 223 (270)
T KOG4627|consen 147 AHLAAQAVMRQR-SPRIWGLILLCGVYDLRELSNTESGNDL-G-LTERNAESVSCDLWEYTDVTVWILVVAAEHESPKLI 223 (270)
T ss_pred HHHHHHHHHHhc-CchHHHHHHHhhHhhHHHHhCCcccccc-C-cccchhhhcCccHHHhcCceeeeeEeeecccCcHHH
Confidence 888776665542 5699999999997776665443332110 0 000000001123556788899999999999987777
Q ss_pred HHHHHHHHHhCCCcceEEEeCCCCCCCcCCC
Q psy18021 160 SMMVKLHENSGGILKQIVLFESGSHNDTWKC 190 (230)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 190 (230)
++.+.+...+.+ .++-.|++.+|+...++
T Consensus 224 eQnrdf~~q~~~--a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 224 EQNRDFADQLRK--ASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HhhhhHHHHhhh--cceeecCCcchhhHHHH
Confidence 888888888774 78999999999876543
No 107
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.80 E-value=6.4e-08 Score=78.99 Aligned_cols=198 Identities=18% Similarity=0.192 Sum_probs=130.4
Q ss_pred CCCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEeccCCcCCC--
Q psy18021 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-- 78 (230)
Q Consensus 3 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-- 78 (230)
++..++..-.+.||+++++.++. +..+..+ +|++|+--|+..-.. .+.... ....++|...+..+.||=|+-.
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~-K~~~~d~-~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVR-KGAKKDE-NPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEe-cCCcCCC-CceEEEeccccccccCCccchhh-HHHHhcCCeEEEEecccCCccCHH
Confidence 34557777888899999988886 3211112 788887777665432 233334 5667789999999999988776
Q ss_pred ------------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhh
Q psy18021 79 ------------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILL 116 (230)
Q Consensus 79 ------------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 116 (230)
||.+...+..++ |+.+.++|+..|..++-+.-....
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr--PelfgA~v~evPllDMlRYh~l~a 545 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR--PELFGAAVCEVPLLDMLRYHLLTA 545 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC--hhhhCceeeccchhhhhhhccccc
Confidence 666666666666 888999999888776654433333
Q ss_pred hhhhcccc-----c-ccccccCcccHHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeC--CCCCCC
Q psy18021 117 KWNVLRKM-----P-LFCFKNKFLSHWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFE--SGSHND 186 (230)
Q Consensus 117 ~~~~~~~~-----~-~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~H~~ 186 (230)
.+.|..-+ | .+..-..|++...++.- =.|+||-.+.+|.-|.|.++++++.+++.....+.+++ ++||..
T Consensus 546 G~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g 625 (648)
T COG1505 546 GSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGG 625 (648)
T ss_pred chhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccC
Confidence 33221111 1 01111235555555442 37899999999999999999999999987545555554 589977
Q ss_pred cCCCCc---HHHHHHHHHHHhc
Q psy18021 187 TWKCSG---YYHTISQFLAKAN 205 (230)
Q Consensus 187 ~~~~~~---~~~~i~~fl~~~~ 205 (230)
.-...+ ....+..||.+.+
T Consensus 626 ~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 626 AAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CCChHHHHHHHHHHHHHHHHhh
Confidence 654443 4455677777654
No 108
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.79 E-value=5.8e-07 Score=67.93 Aligned_cols=184 Identities=11% Similarity=0.155 Sum_probs=104.6
Q ss_pred EEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHH------HHHHhhccCCceEEEEeccCCcCCC----
Q psy18021 9 IFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLH------NVAGLHSMLKCNVLMVEYRGYGKSQ---- 78 (230)
Q Consensus 9 ~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~------~~~~~~~~~g~~vi~~d~rG~G~s~---- 78 (230)
..++++-| .+.+......+.. +|+||-.|-.+-+....+. ...+. ...+.++-+|.||+..-.
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~~----kp~ilT~HDvGlNh~scF~~ff~~~~m~~i--~~~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKGN----KPAILTYHDVGLNHKSCFQGFFNFEDMQEI--LQNFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEEETTE-EEEEEEESS--TT----S-EEEEE--TT--HHHHCHHHHCSHHHHHH--HTTSEEEEEE-TTTSTT-----
T ss_pred ceeccCce-EEEEEEEecCCCC----CceEEEeccccccchHHHHHHhcchhHHHH--hhceEEEEEeCCCCCCCccccc
Confidence 45666655 4555444333322 8999999999988544222 22222 236999999999996554
Q ss_pred ----------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhh---h-hhh
Q psy18021 79 ----------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILL---K-WNV 120 (230)
Q Consensus 79 ----------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~---~-~~~ 120 (230)
|+++-..+|..+ |+++.++|++++............ . +.+
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~--p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L 152 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKH--PERVLGLILVNPTCTAAGWMEWFYQKLSSWLL 152 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHS--GGGEEEEEEES---S---HHHHHHHHHH----
T ss_pred ccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccC--ccceeEEEEEecCCCCccHHHHHHHHHhcccc
Confidence 888888999988 999999999998654322221111 1 000
Q ss_pred --ccc---cccccc-----------------------c----------------cCcccHHhhhcCCCCEEEEEecCCcc
Q psy18021 121 --LRK---MPLFCF-----------------------K----------------NKFLSHWKIERVSNPTFFIVGLNDHL 156 (230)
Q Consensus 121 --~~~---~~~~~~-----------------------~----------------~~~~~~~~~~~i~~Pvl~i~g~~D~~ 156 (230)
..+ ....+. . .+-+.....+...||+|++.|+....
T Consensus 153 ~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~ 232 (283)
T PF03096_consen 153 YSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH 232 (283)
T ss_dssp ---CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT
T ss_pred cccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc
Confidence 000 000000 0 00111122344569999999999765
Q ss_pred cChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHH
Q psy18021 157 VPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 157 v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~ 203 (230)
. +.+.++..++...+.+++.++++|=..+.++|+ +.+.++-||.-
T Consensus 233 ~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 233 V--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp H--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred h--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 3 667888889987778999999999888888985 88888888864
No 109
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.79 E-value=3e-07 Score=75.89 Aligned_cols=46 Identities=26% Similarity=0.438 Sum_probs=40.8
Q ss_pred hhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCC
Q psy18021 138 KIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHN 185 (230)
Q Consensus 138 ~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 185 (230)
.+++|++|++++.|+.|.++|++.+..+.+.+.+ +++++..+ +||.
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHI 481 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHI 481 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcc
Confidence 5788999999999999999999999999999887 48888886 5785
No 110
>KOG2551|consensus
Probab=98.75 E-value=5.1e-07 Score=65.09 Aligned_cols=103 Identities=20% Similarity=0.220 Sum_probs=71.0
Q ss_pred cHHHHHHHHhCCCC------ccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEec
Q psy18021 79 GGAVAIDLLARPEY------ASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGL 152 (230)
Q Consensus 79 Gg~~a~~~a~~~~~------~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~ 152 (230)
|+.++..++..... .+.++-+|+++++.... ..++.......+++|.|.|.|+
T Consensus 114 GA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~---------------------~~~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 114 GAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS---------------------KKLDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred hHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc---------------------chhhhhhhccCCCCCeeEEecc
Confidence 77776666652111 22456777777754321 1122333445789999999999
Q ss_pred CCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhcc
Q psy18021 153 NDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAND 206 (230)
Q Consensus 153 ~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~ 206 (230)
.|.++|...+..+++.... ..++.-+ +||...... .+.+.|.+||....+
T Consensus 173 ~D~iv~~~~s~~L~~~~~~--a~vl~Hp-ggH~VP~~~-~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESFKD--ATVLEHP-GGHIVPNKA-KYKEKIADFIQSFLQ 222 (230)
T ss_pred cceeecchHHHHHHHhcCC--CeEEecC-CCccCCCch-HHHHHHHHHHHHHHH
Confidence 9999999999999999995 4444444 689887655 577888888887764
No 111
>KOG1553|consensus
Probab=98.74 E-value=1.3e-08 Score=77.69 Aligned_cols=146 Identities=18% Similarity=0.246 Sum_probs=103.2
Q ss_pred eeEEEEccCCCEEEEEEecCC-CcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-------
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQP-DVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~-~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------- 78 (230)
+..++++.||.++.+.++... +..+.+ +..||++-|..+-.+- .....-++.||.|+.++++|++.|.
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ng-q~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n 290 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNG-QDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN 290 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCC-ceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCccc
Confidence 567889999999998888654 233333 6789999998876321 1122234569999999999999998
Q ss_pred ------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccc
Q psy18021 79 ------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFC 128 (230)
Q Consensus 79 ------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (230)
||..++++|..+ +.++++|+.+.|.++.......++..+. ......
T Consensus 291 ~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~Y---PdVkavvLDAtFDDllpLAl~rMP~~~~-giV~~a 366 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNY---PDVKAVVLDATFDDLLPLALFRMPTFFS-GIVEHA 366 (517)
T ss_pred chHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcC---CCceEEEeecchhhhhhHHhhhchHHHH-HHHHHH
Confidence 999999999999 5799999999988765544333322111 111111
Q ss_pred ccc--CcccHHhhhcCCCCEEEEEecCCcccChH
Q psy18021 129 FKN--KFLSHWKIERVSNPTFFIVGLNDHLVPPS 160 (230)
Q Consensus 129 ~~~--~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~ 160 (230)
.++ ..+..+.+.+.+.|+.+|--.+|+++...
T Consensus 367 iRnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 367 IRNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HHHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 111 23456778888999999999999997654
No 112
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.72 E-value=1.6e-07 Score=69.15 Aligned_cols=129 Identities=17% Similarity=0.061 Sum_probs=77.3
Q ss_pred CcEEEEEcCCCCCchhhHH--HHHHhhccCCceEEEEeccC------C------------cCCC----------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLH--NVAGLHSMLKCNVLMVEYRG------Y------------GKSQ---------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~--~~~~~~~~~g~~vi~~d~rG------~------------G~s~---------------- 78 (230)
.|.||++||.+.+...+.. .+.++..+.||.|+.++... + |+..
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 7899999999998644332 34445567799999888431 1 1111
Q ss_pred -----------cHHHHHHHHhCCCCccccceEEEecCCCCH--HHHHH--HhhhhhhcccccccccccCcccHHhh-hcC
Q psy18021 79 -----------GGAVAIDLLARPEYASKIWCLIVENTFTSI--PDMAL--ILLKWNVLRKMPLFCFKNKFLSHWKI-ERV 142 (230)
Q Consensus 79 -----------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i 142 (230)
||.++..++..+ |+.+.++...++...- ..... ..+.. .....+.... ...... ..-
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~--pd~faa~a~~sG~~~~~a~~~~~a~~~m~~-g~~~~p~~~~----~a~~~~g~~~ 168 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAY--PDLFAAVAVVSGVPYGCAASGASALSAMRS-GPRPAPAAAW----GARSDAGAYP 168 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhC--CccceEEEeecccccccccCcccHHHHhhC-CCCCChHHHH----HhhhhccCCC
Confidence 999999999988 9999998887764211 00000 00100 0000111000 000000 011
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhC
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSG 170 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~ 170 (230)
..|++++||+.|..|.+....++.+...
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 3699999999999999988888776554
No 113
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.71 E-value=3.6e-07 Score=68.66 Aligned_cols=128 Identities=15% Similarity=0.170 Sum_probs=83.8
Q ss_pred CCCEEEEEEecCCCcccCCCC-cEEEEEcCCCCCchhhHHHHH-------HhhccCCceEEEEeccC-CcCCC-------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCET-MTLVYLHGNAGNIGHRLHNVA-------GLHSMLKCNVLMVEYRG-YGKSQ------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~-p~vv~~HG~~~~~~~~~~~~~-------~~~~~~g~~vi~~d~rG-~G~s~------- 78 (230)
.|.+|.+.++.|+.-.+.++. |.|||+||.+......+..+. ...-+.+|-|+++-|-- +-.++
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l 249 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYL 249 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhH
Confidence 467888888877554332225 999999999876443333221 12234455666666432 11111
Q ss_pred -----------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhccccccccc
Q psy18021 79 -----------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCF 129 (230)
Q Consensus 79 -----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (230)
||.-++.++..+ |+-+++.+++++-.
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf--PdfFAaa~~iaG~~----------------------- 304 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF--PDFFAAAVPIAGGG----------------------- 304 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC--chhhheeeeecCCC-----------------------
Confidence 777777777777 88888888877722
Q ss_pred ccCcccHHhhhcC-CCCEEEEEecCCcccChHHHHHHHHHhCC
Q psy18021 130 KNKFLSHWKIERV-SNPTFFIVGLNDHLVPPSMMVKLHENSGG 171 (230)
Q Consensus 130 ~~~~~~~~~~~~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~ 171 (230)
+....++.+ +.|+.++|+.+|+++|.+.++-+++.++.
T Consensus 305 ----d~v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 305 ----DRVYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred ----chhhhhhhhccCceEEEEecCCCccccCcceeehHHHHh
Confidence 222333333 68999999999999999999888887765
No 114
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.70 E-value=1.9e-06 Score=67.04 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=54.5
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCC-CCCCCcCCCCc-HHHHHHHHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFES-GSHNDTWKCSG-YYHTISQFLAK 203 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~~-~~~~i~~fl~~ 203 (230)
...++++++|+|++--+.|.+.|++..+++.+.++... .+++++. .||..+....+ +...|..||+.
T Consensus 299 ~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~-~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 299 TAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAG-ALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccC-ceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 34588899999999999999999999999999999642 2766654 69988876664 66888888864
No 115
>KOG2112|consensus
Probab=98.70 E-value=3.4e-07 Score=65.42 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=45.2
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
..|++..||+.|++||..-.++..+.+.. ..+++..+++.+|.. .++-.+.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~---~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST---SPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---cHHHHHHHHHHHHH
Confidence 78999999999999999877766665554 247888999999943 44455778888876
No 116
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.70 E-value=1.4e-06 Score=67.09 Aligned_cols=142 Identities=24% Similarity=0.345 Sum_probs=98.1
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhh------HHHHHHhhccCCceEEEEeccCCcCCC-
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHR------LHNVAGLHSMLKCNVLMVEYRGYGKSQ- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~------~~~~~~~~~~~g~~vi~~d~rG~G~s~- 78 (230)
..++.++. |+..+.+..+..++.++ ...||++-|.++..+.. ...+.+...+.|.+|+.++|||.|.|.
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~---~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G 187 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKP---QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG 187 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCC---CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC
Confidence 45566766 88999998887544322 56999999999886552 144555666789999999999999998
Q ss_pred -------------------------------------cHHHHHHHHhCCCC--ccccce-EEEecCCCCHHHHHHHhhhh
Q psy18021 79 -------------------------------------GGAVAIDLLARPEY--ASKIWC-LIVENTFTSIPDMALILLKW 118 (230)
Q Consensus 79 -------------------------------------Gg~~a~~~a~~~~~--~~~i~~-~i~~~~~~~~~~~~~~~~~~ 118 (230)
||.++..++..... .+.++- +|-..++.++.+.+..+..
T Consensus 188 ~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~- 266 (365)
T PF05677_consen 188 PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFG- 266 (365)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHH-
Confidence 88888876655422 234553 4456788888877765553
Q ss_pred hhcccccccccccCcccHHhhhcCCCCEEEEEecC
Q psy18021 119 NVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLN 153 (230)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~ 153 (230)
+...++.. +.....++.+..+++.||=+++|+.+
T Consensus 267 ~~~~~l~~-l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 267 PIGKLLIK-LLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHHH-HhccCCCchhhhccCCCCeEEEeccc
Confidence 22222222 22345667888889999999999875
No 117
>KOG2931|consensus
Probab=98.69 E-value=3.6e-06 Score=63.27 Aligned_cols=189 Identities=15% Similarity=0.131 Sum_probs=118.2
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhH------HHHHHhhccCCceEEEEeccCCcCCC-
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRL------HNVAGLHSMLKCNVLMVEYRGYGKSQ- 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~------~~~~~~~~~~g~~vi~~d~rG~G~s~- 78 (230)
.++..+.+..|. ++.......+.. +|+||-.|..+-+....+ ..+++ +.++ +.++-+|-+|+-...
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~~~----kpaiiTyhDlglN~~scFq~ff~~p~m~e-i~~~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPKGN----KPAIITYHDLGLNHKSCFQGFFNFPDMAE-ILEH-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeecccccc-EEEEEecCCCCC----CceEEEecccccchHhHhHHhhcCHhHHH-HHhh-eEEEecCCCccccCCc
Confidence 456777777654 444444333322 788999999998854422 22333 3443 999999999984333
Q ss_pred -------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHH---HHHhhhh
Q psy18021 79 -------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDM---ALILLKW 118 (230)
Q Consensus 79 -------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~---~~~~~~~ 118 (230)
|+++-.++|..+ |++|-++|++++....... .......
T Consensus 95 ~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~h--p~rV~GLvLIn~~~~a~gwiew~~~K~~s 172 (326)
T KOG2931|consen 95 SFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNH--PERVLGLVLINCDPCAKGWIEWAYNKVSS 172 (326)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcC--hhheeEEEEEecCCCCchHHHHHHHHHHH
Confidence 899999999999 9999999999885432111 1110000
Q ss_pred hhcc------cccccc-----cc------------------------------cCcccHH----h----hhcCCCCEEEE
Q psy18021 119 NVLR------KMPLFC-----FK------------------------------NKFLSHW----K----IERVSNPTFFI 149 (230)
Q Consensus 119 ~~~~------~~~~~~-----~~------------------------------~~~~~~~----~----~~~i~~Pvl~i 149 (230)
..+. ....++ .+ +.++.+. . ...++||+|++
T Consensus 173 ~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllv 252 (326)
T KOG2931|consen 173 NLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLV 252 (326)
T ss_pred HHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEE
Confidence 0000 000000 00 0011111 1 12456999999
Q ss_pred EecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHHHHHhc
Q psy18021 150 VGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQFLAKAN 205 (230)
Q Consensus 150 ~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~~~ 205 (230)
.|++-+.+ +.+.+...++...+..++.+.++|-....++|. +.+.+.-|+.-.-
T Consensus 253 vGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 253 VGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred ecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 99997654 456667777776678889999999888888885 8888888887643
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.69 E-value=6.5e-07 Score=69.40 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=102.3
Q ss_pred CcEEEEEcCCCCCchhhHH-HHHHhhccCCceEEEEeccCCcCCC-----------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLH-NVAGLHSMLKCNVLMVEYRGYGKSQ----------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~-~~~~~~~~~g~~vi~~d~rG~G~s~----------------------------------- 78 (230)
+|++|.+.|.+........ .++.-|.+.|+..+.+..+-||.-.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 7899999999987543333 3366666679999999999998776
Q ss_pred -------------cHHHHHHHHhCCCCccccceEEEecCCCCH-------------HHHHHHhhhhhhc----cccc---
Q psy18021 79 -------------GGAVAIDLLARPEYASKIWCLIVENTFTSI-------------PDMALILLKWNVL----RKMP--- 125 (230)
Q Consensus 79 -------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~-------------~~~~~~~~~~~~~----~~~~--- 125 (230)
||.+|...++.. |..+..+-..++.+.. ++.+...+....+ ...+
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~--p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNW--PRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcC--CCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 999999999988 6666655555543321 1111111100000 0000
Q ss_pred ----ccccccC-------------cccHHhhhcCCC-----CEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCC
Q psy18021 126 ----LFCFKNK-------------FLSHWKIERVSN-----PTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGS 183 (230)
Q Consensus 126 ----~~~~~~~-------------~~~~~~~~~i~~-----Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (230)
....... .+....+.+..+ .+.++.+++|.+||...+..+.+..+ .+++.++++ |
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~l~g-G 326 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRYLPG-G 326 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC--CCeEEEecC-C
Confidence 0000000 111222333333 38899999999999999988888777 489999987 9
Q ss_pred CCCcCCCC--cHHHHHHHHHH
Q psy18021 184 HNDTWKCS--GYYHTISQFLA 202 (230)
Q Consensus 184 H~~~~~~~--~~~~~i~~fl~ 202 (230)
|...+-.. .+.+.|.+-++
T Consensus 327 HVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 327 HVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEeeechHHHHHHHHHHhh
Confidence 98765433 37777776553
No 119
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.67 E-value=2.8e-07 Score=71.32 Aligned_cols=72 Identities=21% Similarity=0.327 Sum_probs=57.8
Q ss_pred ccHHhhhcCC-CCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC-C---cHHHHHHHHHHHhc
Q psy18021 134 LSHWKIERVS-NPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC-S---GYYHTISQFLAKAN 205 (230)
Q Consensus 134 ~~~~~~~~i~-~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~---~~~~~i~~fl~~~~ 205 (230)
+....+.++. +|+|++||.+|.++|...+..+++.....+...+.+++++|...... + +.+..+.+|+.+.+
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3445556665 79999999999999999999999988863478888899999988633 3 47788999988754
No 120
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.64 E-value=3.5e-07 Score=73.18 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
.|+|||.||.+++ ...+..+...|+.+||.|+++|.|..
T Consensus 100 ~PvvIFSHGlgg~-R~~yS~~~~eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 100 FPVVIFSHGLGGS-RTSYSAICGELASHGYVVAAIEHRDG 138 (379)
T ss_dssp EEEEEEE--TT---TTTTHHHHHHHHHTT-EEEEE---SS
T ss_pred CCEEEEeCCCCcc-hhhHHHHHHHHHhCCeEEEEeccCCC
Confidence 8999999999999 44566666678999999999999954
No 121
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.62 E-value=2e-06 Score=65.69 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=61.7
Q ss_pred CcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEecc----CCcCCC------------------------------
Q psy18021 35 TMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYR----GYGKSQ------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~r----G~G~s~------------------------------ 78 (230)
+-+||||-|.+.... .+...+++.+...||.++.+-++ |+|.+.
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVL 112 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVL 112 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEE
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEE
Confidence 348999999987642 47788888888889999999865 677766
Q ss_pred -----cHHHHHHHHhCCCC---ccccceEEEecCCCCH-------------HHHH---HHhhhh-hhccccccccc----
Q psy18021 79 -----GGAVAIDLLARPEY---ASKIWCLIVENTFTSI-------------PDMA---LILLKW-NVLRKMPLFCF---- 129 (230)
Q Consensus 79 -----Gg~~a~~~a~~~~~---~~~i~~~i~~~~~~~~-------------~~~~---~~~~~~-~~~~~~~~~~~---- 129 (230)
|+.-+++++..... ...|++.|+.+|..+- .+.+ +..... ..-..+|....
T Consensus 113 mGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~ 192 (303)
T PF08538_consen 113 MGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLVF 192 (303)
T ss_dssp EEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT
T ss_pred EecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeecccccccc
Confidence 89999988876632 3689999999996541 1111 111000 00001110000
Q ss_pred -c------------------cCc-------ccHHhhhcCCCCEEEEEecCCcccChHHH-HHHHHHhCCC------cceE
Q psy18021 130 -K------------------NKF-------LSHWKIERVSNPTFFIVGLNDHLVPPSMM-VKLHENSGGI------LKQI 176 (230)
Q Consensus 130 -~------------------~~~-------~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~-~~~~~~~~~~------~~~~ 176 (230)
. +-| ...+.+..++.|+|++.+.+|+++|...- +++.++.+.. ....
T Consensus 193 ~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S 272 (303)
T PF08538_consen 193 YDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLS 272 (303)
T ss_dssp -SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------------------------
T ss_pred CCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccc
Confidence 0 001 11346778889999999999999987433 3334433321 1234
Q ss_pred EEeCCCCCCCcCCCC-----cHHHHHHHHH
Q psy18021 177 VLFESGSHNDTWKCS-----GYYHTISQFL 201 (230)
Q Consensus 177 ~~~~~~~H~~~~~~~-----~~~~~i~~fl 201 (230)
-++|||.|....... .+.+.|..||
T Consensus 273 ~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 273 GIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp ------------------------------
T ss_pred cccccccccccccccccccccccccccccC
Confidence 589999998875433 2455556665
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.59 E-value=1.2e-07 Score=69.97 Aligned_cols=49 Identities=27% Similarity=0.389 Sum_probs=32.9
Q ss_pred hhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 139 IERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 139 ~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
-..|++|+|.|+|++|.+++++.++.+.+..... .+++..++ ||.....
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHDG-GHHVPRK 205 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEESS-SSS----
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEECC-CCcCcCC
Confidence 4567999999999999999999999999988843 67777775 7876654
No 123
>KOG2565|consensus
Probab=98.55 E-value=1.4e-06 Score=67.47 Aligned_cols=85 Identities=25% Similarity=0.388 Sum_probs=64.0
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHhhccC---------CceEEEEeccCCcCCC-------
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSML---------KCNVLMVEYRGYGKSQ------- 78 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~---------g~~vi~~d~rG~G~s~------- 78 (230)
.|.+++.....++..+.++...+++++|||+++...++..+. +|.+. -+.||++-++|+|-|+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIP-lLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIP-LLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhh-hhcCccccCCccceeEEEeccCCCCcccCcCCccCCc
Confidence 477888777766543322214579999999999877777665 34332 3789999999999998
Q ss_pred ----------------------------cHHHHHHHHhCCCCccccceEEEe
Q psy18021 79 ----------------------------GGAVAIDLLARPEYASKIWCLIVE 102 (230)
Q Consensus 79 ----------------------------Gg~~a~~~a~~~~~~~~i~~~i~~ 102 (230)
|+-++..+|..+ |.+|.++=+.
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLy--PenV~GlHln 260 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLY--PENVLGLHLN 260 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhc--chhhhHhhhc
Confidence 888888999988 9999888553
No 124
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.51 E-value=4.2e-07 Score=69.84 Aligned_cols=69 Identities=17% Similarity=0.082 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCCc-hhhHHHHHH-hhccCCceEEEEeccCCcCCC----------------------------------
Q psy18021 35 TMTLVYLHGNAGNI-GHRLHNVAG-LHSMLKCNVLMVEYRGYGKSQ---------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~-~~~~~~~~~-~~~~~g~~vi~~d~rG~G~s~---------------------------------- 78 (230)
+|++|++||++++. ..|...++. ++.+.+++|+++|+++++.+.
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~ 115 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVH 115 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEE
Confidence 67999999999986 445555554 445568999999999985432
Q ss_pred ------cHHHHHHHHhCCCCccccceEEEecCC
Q psy18021 79 ------GGAVAIDLLARPEYASKIWCLIVENTF 105 (230)
Q Consensus 79 ------Gg~~a~~~a~~~~~~~~i~~~i~~~~~ 105 (230)
||.+|..++... +.++..++.+.|.
T Consensus 116 lIGhSlGa~vAg~~a~~~--~~~v~~iv~LDPa 146 (275)
T cd00707 116 LIGHSLGAHVAGFAGKRL--NGKLGRITGLDPA 146 (275)
T ss_pred EEEecHHHHHHHHHHHHh--cCccceeEEecCC
Confidence 899998888877 7789999988874
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.50 E-value=5.5e-08 Score=71.80 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=68.5
Q ss_pred CcCCCcHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhh-hhccccc-----------c-----ccccc-----
Q psy18021 74 YGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKW-NVLRKMP-----------L-----FCFKN----- 131 (230)
Q Consensus 74 ~G~s~Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~-----~~~~~----- 131 (230)
+|.|.||-+|+.+|+.+ | .|+++|.++|.............. ..+++++ . .....
T Consensus 27 ~G~SkGaelALllAs~~--~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (213)
T PF08840_consen 27 IGISKGAELALLLASRF--P-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKA 103 (213)
T ss_dssp EEETHHHHHHHHHHHHS--S-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS-EE-TT-B--TTTGG
T ss_pred EEECHHHHHHHHHHhcC--C-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCcceehhhhhhcccccc
Confidence 46777999999999999 4 999999998854322110000000 0000000 0 00000
Q ss_pred CcccHHhhhcCCCCEEEEEecCCcccChH-HHHHHHHHhCCC----cceEEEeCCCCCCCcCC-----------------
Q psy18021 132 KFLSHWKIERVSNPTFFIVGLNDHLVPPS-MMVKLHENSGGI----LKQIVLFESGSHNDTWK----------------- 189 (230)
Q Consensus 132 ~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~-~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~----------------- 189 (230)
.....-.+.++++|+|+|.|++|.+.|.. .++.+.++++.. +.+++.++++||.....
T Consensus 104 ~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~ 183 (213)
T PF08840_consen 104 VEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPL 183 (213)
T ss_dssp GCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEE
T ss_pred cccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcc
Confidence 01112347788999999999999999874 444555555442 46888999999975311
Q ss_pred ------------CCcHHHHHHHHHHHhc
Q psy18021 190 ------------CSGYYHTISQFLAKAN 205 (230)
Q Consensus 190 ------------~~~~~~~i~~fl~~~~ 205 (230)
..+.|..+.+||++.+
T Consensus 184 ~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 184 AWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp E--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 0136888999998876
No 126
>KOG2237|consensus
Probab=98.48 E-value=2e-06 Score=70.94 Aligned_cols=200 Identities=16% Similarity=0.054 Sum_probs=121.5
Q ss_pred CceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC-----
Q psy18021 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ----- 78 (230)
Q Consensus 5 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~----- 78 (230)
..+.+.+++.||+.++-.++..+..+..+++|.+|+.+|+-+-.- ..+..-...|.++|+.....|.||=|+-.
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 346788899999988887776554443333899988888766431 22222222356689999999999987665
Q ss_pred ---------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhh
Q psy18021 79 ---------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWN 119 (230)
Q Consensus 79 ---------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 119 (230)
||.++.....+. |+.+.++|+-.|+.++-+....-..--
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r--PdLF~avia~VpfmDvL~t~~~tilpl 597 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR--PDLFGAVIAKVPFMDVLNTHKDTILPL 597 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccC--chHhhhhhhcCcceehhhhhccCcccc
Confidence 888888888888 999999999999887644332211000
Q ss_pred hccccc---------ccccccCcccHHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCC---------CcceEEEe
Q psy18021 120 VLRKMP---------LFCFKNKFLSHWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGG---------ILKQIVLF 179 (230)
Q Consensus 120 ~~~~~~---------~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~---------~~~~~~~~ 179 (230)
+...+. .+.....+.+...+..- =.-+|+..+.+|.-|.+-++.++.++++. ++.-+.+-
T Consensus 598 t~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~ 677 (712)
T KOG2237|consen 598 TTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIE 677 (712)
T ss_pred chhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEe
Confidence 000000 01111122222222111 13478888999888887777666665542 12445566
Q ss_pred CCCCCCCcCCCCc---HHHHHHHHHHHhcc
Q psy18021 180 ESGSHNDTWKCSG---YYHTISQFLAKAND 206 (230)
Q Consensus 180 ~~~~H~~~~~~~~---~~~~i~~fl~~~~~ 206 (230)
.+|||+.-...-. -.....+||.+.+.
T Consensus 678 ~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 678 TKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred cCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 7899966533222 22445677777664
No 127
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.44 E-value=9.3e-07 Score=71.55 Aligned_cols=69 Identities=16% Similarity=0.111 Sum_probs=53.6
Q ss_pred CcEEEEEcCCCCCc--hhhHHHHHHhh-cc-CCceEEEEeccCCcCCC--------------------------------
Q psy18021 35 TMTLVYLHGNAGNI--GHRLHNVAGLH-SM-LKCNVLMVEYRGYGKSQ-------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~--~~~~~~~~~~~-~~-~g~~vi~~d~rG~G~s~-------------------------------- 78 (230)
+|++|++||++.+. ..|...+...+ .. ..++|+++|++|+|.+.
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~ 120 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDN 120 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 78999999998753 23444444433 22 36999999999999875
Q ss_pred --------cHHHHHHHHhCCCCccccceEEEecCC
Q psy18021 79 --------GGAVAIDLLARPEYASKIWCLIVENTF 105 (230)
Q Consensus 79 --------Gg~~a~~~a~~~~~~~~i~~~i~~~~~ 105 (230)
||.+|..++... +.++..+++++|.
T Consensus 121 VhLIGHSLGAhIAg~ag~~~--p~rV~rItgLDPA 153 (442)
T TIGR03230 121 VHLLGYSLGAHVAGIAGSLT--KHKVNRITGLDPA 153 (442)
T ss_pred EEEEEECHHHHHHHHHHHhC--CcceeEEEEEcCC
Confidence 999999988877 7889999998884
No 128
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.44 E-value=4.5e-06 Score=61.37 Aligned_cols=160 Identities=17% Similarity=0.135 Sum_probs=98.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC-----------------------------------c
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ-----------------------------------G 79 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~-----------------------------------G 79 (230)
++-++++|=.|++...+..+.. .+.. .+.++.+.|||+|.-- |
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~-~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmG 84 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSR-RLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMG 84 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHh-hCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchh
Confidence 4567777766666444444444 3333 5899999999998663 9
Q ss_pred HHHHHHHHhCCCCc-cccceEEEecCCCC------------HHHHHHHhhhhhhccccccccc-----------------
Q psy18021 80 GAVAIDLLARPEYA-SKIWCLIVENTFTS------------IPDMALILLKWNVLRKMPLFCF----------------- 129 (230)
Q Consensus 80 g~~a~~~a~~~~~~-~~i~~~i~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~----------------- 129 (230)
|.+|..+|...+.. ..+.++.+.+.... -.+++...... ...+..+.
T Consensus 85 a~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~l---gG~p~e~led~El~~l~LPilRAD~ 161 (244)
T COG3208 85 AMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDL---GGTPPELLEDPELMALFLPILRADF 161 (244)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHh---CCCChHHhcCHHHHHHHHHHHHHHH
Confidence 99999888765321 12445544332111 11222222111 11111000
Q ss_pred --ccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC-cHHHHHHHHHH
Q psy18021 130 --KNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS-GYYHTISQFLA 202 (230)
Q Consensus 130 --~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~ 202 (230)
...|..... ..+.+|+.++.|++|..++.+.+..+.+..++ ..++..++| ||+...... ++...|.+.+.
T Consensus 162 ~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 162 RALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcC-CceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 011211111 45789999999999999999999999988886 499999996 898887765 46666665554
No 129
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.42 E-value=6.8e-06 Score=60.97 Aligned_cols=139 Identities=13% Similarity=0.054 Sum_probs=88.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC-cCCC-----------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY-GKSQ----------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~-G~s~----------------------------------- 78 (230)
.|+|+|+||+.-. ..+|..+-...+.+||.|+++++-.- +-+.
T Consensus 46 yPVilF~HG~~l~-ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal 124 (307)
T PF07224_consen 46 YPVILFLHGFNLY-NSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLAL 124 (307)
T ss_pred ccEEEEeechhhh-hHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEE
Confidence 7999999999987 66788777888999999999998542 1111
Q ss_pred -----cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecC
Q psy18021 79 -----GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLN 153 (230)
Q Consensus 79 -----Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~ 153 (230)
||-+|..+|..+...-.+.++|.+.|...... ..+..|..+. +.+. --++++|+++|-..-
T Consensus 125 ~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k---------~~~t~P~iLt---y~p~--SF~l~iPv~VIGtGL 190 (307)
T PF07224_consen 125 SGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSK---------GKQTPPPILT---YVPQ--SFDLDIPVLVIGTGL 190 (307)
T ss_pred eecCCccHHHHHHHhcccccCchhheecccccCCCCC---------CCCCCCCeee---cCCc--ccccCCceEEEecCc
Confidence 88888877776643456777887777544221 1111222111 1111 125578999987554
Q ss_pred C----cc---cCh--HHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 154 D----HL---VPP--SMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 154 D----~~---v~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
- .+ +.+ -..++++...+.+ +-.++..+=||..+.+
T Consensus 191 g~~~~~~~~~CaP~gvnH~eFf~eCk~p-~~hfV~~dYGHmDmLD 234 (307)
T PF07224_consen 191 GPKRNPLFPPCAPDGVNHEEFFNECKPP-CAHFVAKDYGHMDMLD 234 (307)
T ss_pred CccccCCCCCCCCCCcCHHHHHHhhccc-ceeeeecccccccccc
Confidence 4 11 222 2456777777754 5556666789987754
No 130
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.41 E-value=7.2e-06 Score=57.15 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=91.7
Q ss_pred cEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC--------------------------cHHHHHHHHh
Q psy18021 36 MTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--------------------------GGAVAIDLLA 88 (230)
Q Consensus 36 p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--------------------------Gg~~a~~~a~ 88 (230)
+.+|.+||+.++. .+|...+...+.. +-.+++...-.-. |+.+++.++.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~~w~~P~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~ 78 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQDDWEAPVLDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAE 78 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccCCCCCCCHHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHH
Confidence 4699999999886 3455544443322 3333333222222 9999999998
Q ss_pred CCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccChHHHHHHHHH
Q psy18021 89 RPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN 168 (230)
Q Consensus 89 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~ 168 (230)
.. ...|+++++++|+.--....... .+. .+++.. .....-|.+++.+.+|++++++.++.+.+.
T Consensus 79 ~~--~~~V~GalLVAppd~~~~~~~~~-----------~~~--tf~~~p-~~~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 79 HI--QRQVAGALLVAPPDVSRPEIRPK-----------HLM--TFDPIP-REPLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred hh--hhccceEEEecCCCccccccchh-----------hcc--ccCCCc-cccCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 87 56999999999964322111000 000 111111 233456999999999999999999999998
Q ss_pred hCCCcceEEEeCCCCCCCcCCCC----cHHHHHHHHHHH
Q psy18021 169 SGGILKQIVLFESGSHNDTWKCS----GYYHTISQFLAK 203 (230)
Q Consensus 169 ~~~~~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~ 203 (230)
.. ..++.+..+||......- +....+.+|+.+
T Consensus 143 wg---s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 143 WG---SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cc---HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 88 788888889996543332 333444444443
No 131
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.41 E-value=3.4e-06 Score=66.66 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=51.9
Q ss_pred HhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCC------cHHH----HHHHHHHHhcc
Q psy18021 137 WKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCS------GYYH----TISQFLAKAND 206 (230)
Q Consensus 137 ~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~------~~~~----~i~~fl~~~~~ 206 (230)
-.+.+|+||++++.+++|.++|.+......+.+++ +++++..+ +||....-.+ ++|. .+..|+.+.-+
T Consensus 324 VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 324 VDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKE 401 (445)
T ss_pred echhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhhcc
Confidence 35678999999999999999999999988888886 47887776 6897654332 2444 67777776543
No 132
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.37 E-value=1.1e-05 Score=66.62 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=72.6
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEc--CCCCCc--hhhHHHHHH---hhccCCceEEEEeccCCcCCC
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLH--GNAGNI--GHRLHNVAG---LHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~H--G~~~~~--~~~~~~~~~---~~~~~g~~vi~~d~rG~G~s~ 78 (230)
..++.++..||++|..-++.|++..+ .|+++..+ .+.-.. ......... .++.+||.|+..|.||.|.|.
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~---~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGP---LPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCC---CceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 45688999999999998887775431 78999888 333221 011112222 578889999999999999998
Q ss_pred --------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCC
Q psy18021 79 --------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTS 107 (230)
Q Consensus 79 --------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~ 107 (230)
+|...+.+|+.. |+.+++++..++..+
T Consensus 96 G~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~--pPaLkai~p~~~~~D 160 (563)
T COG2936 96 GVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQ--PPALKAIAPTEGLVD 160 (563)
T ss_pred cccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcC--Cchheeecccccccc
Confidence 888888888887 888999988777554
No 133
>KOG3847|consensus
Probab=98.31 E-value=3.3e-05 Score=58.80 Aligned_cols=43 Identities=19% Similarity=0.097 Sum_probs=36.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
-|+|||.||.+++ +..|..+.-.++.+||.|.+++.|-+....
T Consensus 118 ~PvvvFSHGLggs-Rt~YSa~c~~LAShG~VVaavEHRD~SA~~ 160 (399)
T KOG3847|consen 118 YPVVVFSHGLGGS-RTLYSAYCTSLASHGFVVAAVEHRDRSACW 160 (399)
T ss_pred ccEEEEecccccc-hhhHHHHhhhHhhCceEEEEeecccCccee
Confidence 7999999999999 667777777789999999999998765544
No 134
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=98.27 E-value=3.9e-06 Score=48.77 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=30.0
Q ss_pred CCCCceeEEEEccCCCEEEEEEecCCC--cccCCCCcEEEEEcCCCCCchhh
Q psy18021 2 HGLPYESIFVKSLDGTKIHLYFIPQPD--VKAKCETMTLVYLHGNAGNIGHR 51 (230)
Q Consensus 2 ~~~~~~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~p~vv~~HG~~~~~~~~ 51 (230)
+|++.|+..+.|.||..|..+.++.++ ....+++|+|++.||..++...|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 688999999999999999998888766 11122378999999999986554
No 135
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.27 E-value=2.9e-06 Score=66.12 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=42.8
Q ss_pred HHhhhcCCCCEEEEEecCCcccChH-HHHHHHHHhCCCcceEEEeCCCCCCCcCCCC
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPS-MMVKLHENSGGILKQIVLFESGSHNDTWKCS 191 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 191 (230)
...+.+++.|++++-|..|.+.|+. .....+..+++..+-+.+++++.|+.+.+..
T Consensus 244 ~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~ 300 (365)
T COG4188 244 TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELC 300 (365)
T ss_pred cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccC
Confidence 4556788999999999999987763 3444556677655678889999999886654
No 136
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.26 E-value=2e-06 Score=74.03 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
.|+||++||++++.. .+..+++.|.++||.|+++|+||||+|
T Consensus 449 ~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S 490 (792)
T TIGR03502 449 WPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGAR 490 (792)
T ss_pred CcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcc
Confidence 579999999999955 455566677888999999999999998
No 137
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.24 E-value=7.5e-05 Score=56.55 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=64.0
Q ss_pred eEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHH--HHHHhhccCCceEEEEe-ccCCc------CC-
Q psy18021 8 SIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLH--NVAGLHSMLKCNVLMVE-YRGYG------KS- 77 (230)
Q Consensus 8 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~--~~~~~~~~~g~~vi~~d-~rG~G------~s- 77 (230)
..+|.. +|....++++.|...+.+ .|.||++||..++...+.. .+..+..+.||.|+.+| ++++. .+
T Consensus 37 ~~s~~~-~g~~r~y~l~vP~g~~~~--apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 37 VASFDV-NGLKRSYRLYVPPGLPSG--APLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred cccccc-CCCccceEEEcCCCCCCC--CCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccC
Confidence 344544 456677777766654432 6899999999998643332 34556677899999984 22222 12
Q ss_pred ---C------------------------------------cHHHHHHHHhCCCCccccceEEEecCCC
Q psy18021 78 ---Q------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFT 106 (230)
Q Consensus 78 ---~------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~ 106 (230)
. ||.++..++..+ |+.+.++-.+++..
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~--p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEY--PDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcC--cccccceeeeeccc
Confidence 1 999999999998 88888887777643
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.20 E-value=0.00024 Score=55.57 Aligned_cols=173 Identities=11% Similarity=0.051 Sum_probs=109.0
Q ss_pred eeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc--hhhHHHHHHhhccCCceEEEEeccC--CcCC-----
Q psy18021 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI--GHRLHNVAGLHSMLKCNVLMVEYRG--YGKS----- 77 (230)
Q Consensus 7 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~--~~~~~~~~~~~~~~g~~vi~~d~rG--~G~s----- 77 (230)
|-+++.. ++..+-+.+.+...... +.+||++||.+.+. ......+...|.++|++++++.++. ....
T Consensus 63 e~~~L~~-~~~~flaL~~~~~~~~~---~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 63 EVQWLQA-GEERFLALWRPANSAKP---QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hcEEeec-CCEEEEEEEecccCCCC---ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 4455655 44555555555444332 55999999999884 2455667777899999999999887 1100
Q ss_pred ----------------------------C-----------------------------------cHHHHHHHHhCCCCcc
Q psy18021 78 ----------------------------Q-----------------------------------GGAVAIDLLARPEYAS 94 (230)
Q Consensus 78 ----------------------------~-----------------------------------Gg~~a~~~a~~~~~~~ 94 (230)
. |+..++.+.+... +.
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~-~~ 217 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP-PP 217 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC-Cc
Confidence 0 7777777776652 33
Q ss_pred ccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccCh--HHHHHHHHHhCCC
Q psy18021 95 KIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPP--SMMVKLHENSGGI 172 (230)
Q Consensus 95 ~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~~--~~~~~~~~~~~~~ 172 (230)
.++++|+++++....... ....+.+.++++|||=|++.....+-. ..-+....+....
T Consensus 218 ~~daLV~I~a~~p~~~~n--------------------~~l~~~la~l~iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~ 277 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDRN--------------------PALAEQLAQLKIPVLDIYSADNPASQQTAKQRKQAAKRNKKP 277 (310)
T ss_pred ccCeEEEEeCCCCcchhh--------------------hhHHHHhhccCCCEEEEecCCChHHHHHHHHHHHHHHhccCC
Confidence 578888888864432210 123456778899999999877332221 1112233333334
Q ss_pred cceEEEeCCCCCCCcCCCCcHHHHHHHHHHHh
Q psy18021 173 LKQIVLFESGSHNDTWKCSGYYHTISQFLAKA 204 (230)
Q Consensus 173 ~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 204 (230)
+.+.+.+.+..|........+.+.|..||.+.
T Consensus 278 ~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 278 DYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred CceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 57778888877755544445889999999864
No 139
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.16 E-value=9.5e-06 Score=52.62 Aligned_cols=59 Identities=14% Similarity=0.217 Sum_probs=51.4
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC-CcHHHHHHHHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC-SGYYHTISQFLAK 203 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~~ 203 (230)
..|+|++.++.|.++|++.++.+.+.+.+ .+++.+++.||...... +-..+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 58999999999999999999999999994 89999999999988533 3477778888875
No 140
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.12 E-value=0.00012 Score=54.62 Aligned_cols=160 Identities=16% Similarity=0.153 Sum_probs=90.6
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHHHH
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGAVA 83 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~~a 83 (230)
+|+++|+++++ ...+..+++.+....+.|+.++++|.+... ||.+|
T Consensus 2 ~lf~~p~~gG~-~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA 80 (229)
T PF00975_consen 2 PLFCFPPAGGS-ASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILA 80 (229)
T ss_dssp EEEEESSTTCS-GGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHH
T ss_pred eEEEEcCCccC-HHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHH
Confidence 69999999998 556667777666545899999999997333 99999
Q ss_pred HHHHhCCCC-ccccceEEEecCCCCHHH------------HHHHhhhhhhc----cccccc---ccccCcccHHh-----
Q psy18021 84 IDLLARPEY-ASKIWCLIVENTFTSIPD------------MALILLKWNVL----RKMPLF---CFKNKFLSHWK----- 138 (230)
Q Consensus 84 ~~~a~~~~~-~~~i~~~i~~~~~~~~~~------------~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~----- 138 (230)
..+|..-+. -..+..++++.+...... ........... ...... ....-......
T Consensus 81 ~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (229)
T PF00975_consen 81 FEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALENYS 160 (229)
T ss_dssp HHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 998876532 245888888875332100 00000000000 000000 00000000001
Q ss_pred hhcC---CCCEEEEEecCCcccChH---HHHHHHHHhCCCcceEEEeCCCCCCCcCCCC---cHHHHHHHH
Q psy18021 139 IERV---SNPTFFIVGLNDHLVPPS---MMVKLHENSGGILKQIVLFESGSHNDTWKCS---GYYHTISQF 200 (230)
Q Consensus 139 ~~~i---~~Pvl~i~g~~D~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~---~~~~~i~~f 200 (230)
.... .+|..+.....|...... ....+.+...+ ..+++.++| +|+.+.. + ++.+.|.+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-~~~~~~v~G-~H~~~l~-~~~~~i~~~I~~~ 228 (229)
T PF00975_consen 161 IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSG-DVEVHDVPG-DHFSMLK-PHVAEIAEKIAEW 228 (229)
T ss_dssp -TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSS-SEEEEEESS-ETTGHHS-TTHHHHHHHHHHH
T ss_pred CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCC-CcEEEEEcC-CCcEecc-hHHHHHHHHHhcc
Confidence 1111 456888888888887665 22234444443 478888985 8999887 4 244444444
No 141
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.11 E-value=4.7e-05 Score=60.31 Aligned_cols=128 Identities=11% Similarity=0.026 Sum_probs=89.9
Q ss_pred cHHHHHHHHhCCCCccccceEEEec-CCCCHHHHHHHhhhhhhccc---ccc--------cc-------cccCcccHHhh
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVEN-TFTSIPDMALILLKWNVLRK---MPL--------FC-------FKNKFLSHWKI 139 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~-~~~~~~~~~~~~~~~~~~~~---~~~--------~~-------~~~~~~~~~~~ 139 (230)
=|.++...|+.. +||++++-+. ...++...+...+......+ +.. .+ +....++....
T Consensus 182 RGWTtWltaa~D---~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~ 258 (367)
T PF10142_consen 182 RGWTTWLTAAVD---PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYR 258 (367)
T ss_pred HhHHHHHhhccC---cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHH
Confidence 466777777754 7888887533 34455554443332111000 000 00 01235667778
Q ss_pred hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhcccCCCCC
Q psy18021 140 ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKANDFLPTPP 212 (230)
Q Consensus 140 ~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~~~~~~~ 212 (230)
.+++.|.++|.|..|++..++.+..++..++++ +.+..+|+++|.... .+..+.+..|+.......+.+.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~-K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGE-KYLRYVPNAGHSLIG--SDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCC-eeEEeCCCCCcccch--HHHHHHHHHHHHHHHcCCCCCe
Confidence 889999999999999999999999999999985 999999999998776 6688889999999886655553
No 142
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.08 E-value=0.00012 Score=61.21 Aligned_cols=188 Identities=14% Similarity=0.077 Sum_probs=115.9
Q ss_pred ceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC------
Q psy18021 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------ 78 (230)
Q Consensus 6 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------ 78 (230)
.+.++.+..||++++..++..++.+..++.|++|+.-|.-+.. ...+....-.|.++|+.-...--||=|.=.
T Consensus 419 s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 419 SRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 4667788889999988777654422222378888887766543 223333333467889887777788876555
Q ss_pred --------------------------------------cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHH-hhhhh
Q psy18021 79 --------------------------------------GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALI-LLKWN 119 (230)
Q Consensus 79 --------------------------------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~~~~ 119 (230)
||++....+... |+..+++|+..||.+.-..... ..++.
T Consensus 499 GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~--P~lf~~iiA~VPFVDvltTMlD~slPLT 576 (682)
T COG1770 499 GKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA--PDLFAGIIAQVPFVDVLTTMLDPSLPLT 576 (682)
T ss_pred hhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC--hhhhhheeecCCccchhhhhcCCCCCCC
Confidence 888888888888 9999999999999876443221 11110
Q ss_pred hccccccc---------ccccCcccHHhhhcC-CCCEEEEEecCCcccChHHHHHHHHHhCCC----cceEEEe-CCCCC
Q psy18021 120 VLRKMPLF---------CFKNKFLSHWKIERV-SNPTFFIVGLNDHLVPPSMMVKLHENSGGI----LKQIVLF-ESGSH 184 (230)
Q Consensus 120 ~~~~~~~~---------~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~----~~~~~~~-~~~~H 184 (230)
... .+.| -....|++.+.++.- -.|+|++.|..|..|.+=+..++..++... +.-++.. -.+||
T Consensus 577 ~~E-~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGH 655 (682)
T COG1770 577 VTE-WDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGH 655 (682)
T ss_pred ccc-hhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccC
Confidence 000 0011 011234555555443 367999999999999886666666655531 1122222 35899
Q ss_pred CCcCCCCcHHHH
Q psy18021 185 NDTWKCSGYYHT 196 (230)
Q Consensus 185 ~~~~~~~~~~~~ 196 (230)
...-...+.++.
T Consensus 656 gG~SgRf~~lee 667 (682)
T COG1770 656 GGASGRFQRLEE 667 (682)
T ss_pred CCCCCchHHHHH
Confidence 776555544433
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.02 E-value=0.00013 Score=56.54 Aligned_cols=65 Identities=18% Similarity=0.162 Sum_probs=49.2
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC---CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhcccCC
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG---ILKQIVLFESGSHNDTWKCSGYYHTISQFLAKANDFLP 209 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~~~~ 209 (230)
+.|+++.||..|.++|+....++.++.-. .+++++.+++.+|...... -......||.+.++..+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~--~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA--SAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc--CcHHHHHHHHHHHCCCC
Confidence 68999999999999999999888775532 3578888899999765322 22456689988876543
No 144
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.93 E-value=0.00012 Score=52.26 Aligned_cols=148 Identities=14% Similarity=0.106 Sum_probs=84.6
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHHH
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGAV 82 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~~ 82 (230)
..+||+-|-++= ......+++.|+++|+.|+.+|-+-|--+. |+-+
T Consensus 3 t~~v~~SGDgGw-~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADv 81 (192)
T PF06057_consen 3 TLAVFFSGDGGW-RDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADV 81 (192)
T ss_pred EEEEEEeCCCCc-hhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchh
Confidence 367777776665 466778888899999999999986553333 4444
Q ss_pred HHHHHhCCCC--ccccceEEEecCCCCHHHHHHHhhhhhhccccccccc----ccCcccHHhhhcCC-CCEEEEEecCCc
Q psy18021 83 AIDLLARPEY--ASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCF----KNKFLSHWKIERVS-NPTFFIVGLNDH 155 (230)
Q Consensus 83 a~~~a~~~~~--~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~-~Pvl~i~g~~D~ 155 (230)
.-....+... ..+|..+++++|..... +.. ....|+. ...++...+++++. .|++.|+|++++
T Consensus 82 lP~~~nrLp~~~r~~v~~v~Ll~p~~~~d------Fei----hv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~ 151 (192)
T PF06057_consen 82 LPFIYNRLPAALRARVAQVVLLSPSTTAD------FEI----HVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDED 151 (192)
T ss_pred HHHHHhhCCHHHHhheeEEEEeccCCcce------EEE----EhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCC
Confidence 3333333200 23555555555532210 000 0011211 11246677888885 599999999876
Q ss_pred ccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 156 LVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
-.... .+..++.+.+.+||+.|+.- +.+.+.+.|.+-++
T Consensus 152 d~~cp-------~l~~~~~~~i~lpGgHHfd~-dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 152 DSLCP-------SLRQPGVEVIALPGGHHFDG-DYDALAKRILDALK 190 (192)
T ss_pred CCcCc-------cccCCCcEEEEcCCCcCCCC-CHHHHHHHHHHHHh
Confidence 52221 23344689999998666332 22345566655544
No 145
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.88 E-value=0.00029 Score=55.83 Aligned_cols=175 Identities=15% Similarity=0.228 Sum_probs=92.9
Q ss_pred EEEec-CCCcccCCCCcEEEEEcCCCCCchh------hHHHHHHhhccCCceEEEEeccCCc---CCC------------
Q psy18021 21 LYFIP-QPDVKAKCETMTLVYLHGNAGNIGH------RLHNVAGLHSMLKCNVLMVEYRGYG---KSQ------------ 78 (230)
Q Consensus 21 ~~~~~-~~~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~~~~~~g~~vi~~d~rG~G---~s~------------ 78 (230)
.|+.. |....++. .|+||++||+|-.... ....+...+. ...++.+||.-.. ...
T Consensus 108 ~Wlvk~P~~~~pk~-DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~ 184 (374)
T PF10340_consen 108 YWLVKAPNRFKPKS-DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVAT 184 (374)
T ss_pred EEEEeCCcccCCCC-CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHH
Confidence 46665 33323333 6899999999855322 2222333344 4589999997655 222
Q ss_pred --------------------cHHHHHHHHhCCCC---ccccceEEEecCCCCHHH-------HH-----HHhhhhhhc--
Q psy18021 79 --------------------GGAVAIDLLARPEY---ASKIWCLIVENTFTSIPD-------MA-----LILLKWNVL-- 121 (230)
Q Consensus 79 --------------------Gg~~a~~~a~~~~~---~~~i~~~i~~~~~~~~~~-------~~-----~~~~~~~~~-- 121 (230)
||.+++.++..... ....+++|++||+..+.. .. .........
T Consensus 185 Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~ 264 (374)
T PF10340_consen 185 YDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSM 264 (374)
T ss_pred HHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccccccccchhhHHH
Confidence 99999876643321 234689999999876531 00 000000000
Q ss_pred ---ccccc-----cccccC-----cc-cHHhhhcC--CCCEEEEEecCCcccChHHHHHHHHHhCCC-------cceEEE
Q psy18021 122 ---RKMPL-----FCFKNK-----FL-SHWKIERV--SNPTFFIVGLNDHLVPPSMMVKLHENSGGI-------LKQIVL 178 (230)
Q Consensus 122 ---~~~~~-----~~~~~~-----~~-~~~~~~~i--~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~-------~~~~~~ 178 (230)
.+... ...... .+ ..+.+.+| +.-++++.|+++-+ ....+++.+.+... ..++.+
T Consensus 265 ~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~~~~~~~~~~nv~~ 342 (374)
T PF10340_consen 265 FGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDVKPNKFSNSNNVYI 342 (374)
T ss_pred HHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhcCccccCCcceEEE
Confidence 00000 000000 10 12233333 46799999988755 35667777766631 246777
Q ss_pred eCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 179 FESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 179 ~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
-+++.|..... .+...+..|.+
T Consensus 343 ~~~G~Hi~P~~--~~~~~~~~W~~ 364 (374)
T PF10340_consen 343 DEGGIHIGPIL--NYSRDLDKWSK 364 (374)
T ss_pred ecCCccccchh--hhhcCHHHHhc
Confidence 78889966421 23344555543
No 146
>PRK04940 hypothetical protein; Provisional
Probab=97.86 E-value=0.00023 Score=50.52 Aligned_cols=107 Identities=15% Similarity=-0.036 Sum_probs=67.2
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCC--CEEEEEecCCcc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSN--PTFFIVGLNDHL 156 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--Pvl~i~g~~D~~ 156 (230)
||+.|..++..+ .++ .|+++|.....+.+......... + .. +. -.....++ ++. ..+++..+.|++
T Consensus 70 GGyyA~~La~~~----g~~-aVLiNPAv~P~~~L~~~ig~~~~-y-~~-~~---~~h~~eL~-~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 70 GGYWAERIGFLC----GIR-QVIFNPNLFPEENMEGKIDRPEE-Y-AD-IA---TKCVTNFR-EKNRDRCLVILSRNDEV 137 (180)
T ss_pred HHHHHHHHHHHH----CCC-EEEECCCCChHHHHHHHhCCCcc-h-hh-hh---HHHHHHhh-hcCcccEEEEEeCCCcc
Confidence 999999999988 454 45778877776655554432111 1 10 00 01122333 333 369999999999
Q ss_pred cChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 157 VPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 157 v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
..+..+.+.++.. .++.+.+|++|.... -+++...|.+|+.
T Consensus 138 LDyr~a~~~y~~~----y~~~v~~GGdH~f~~-fe~~l~~I~~F~~ 178 (180)
T PRK04940 138 LDSQRTAEELHPY----YEIVWDEEQTHKFKN-ISPHLQRIKAFKT 178 (180)
T ss_pred cCHHHHHHHhccC----ceEEEECCCCCCCCC-HHHHHHHHHHHHh
Confidence 9998887665422 267888998885442 2347788888874
No 147
>KOG3253|consensus
Probab=97.79 E-value=0.00035 Score=57.85 Aligned_cols=53 Identities=19% Similarity=0.391 Sum_probs=47.3
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
.+.+-.++.|+||+.|.+|..+++..++++.++++.+ .+++++.+++|.+-.-
T Consensus 297 DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~-~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 297 DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAE-VELHVIGGADHSMAIP 349 (784)
T ss_pred chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhcc-ceEEEecCCCccccCC
Confidence 4566778999999999999999999999999999975 8999999999987643
No 148
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.78 E-value=0.0018 Score=49.65 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhcc--CCceEEEEeccCCcCCC----------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSM--LKCNVLMVEYRGYGKSQ---------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~--~g~~vi~~d~rG~G~s~---------------------------------- 78 (230)
+..||+++|.+|-...+..++..+... ..+.|++..+.||-.+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 568999999999955444444433322 47999999999995443
Q ss_pred ------------cHHHHHHHHhCCC-CccccceEEEecCCC
Q psy18021 79 ------------GGAVAIDLLARPE-YASKIWCLIVENTFT 106 (230)
Q Consensus 79 ------------Gg~~a~~~a~~~~-~~~~i~~~i~~~~~~ 106 (230)
|+++++.++.+.. ...+|.++++..|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 9999999999882 126899999988853
No 149
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.75 E-value=9.5e-05 Score=55.91 Aligned_cols=60 Identities=20% Similarity=0.112 Sum_probs=48.6
Q ss_pred CCCEEEEEec------CCcccChHHHHHHHHHhCC--CcceEEEeCC--CCCCCcCCCCcHHHHHHHHHH
Q psy18021 143 SNPTFFIVGL------NDHLVPPSMMVKLHENSGG--ILKQIVLFES--GSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 143 ~~Pvl~i~g~------~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~--~~H~~~~~~~~~~~~i~~fl~ 202 (230)
++.||-|.|+ .|..||...++.+..-++. ...+-..++| +.|..+.+.+++.+.|.+||-
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFLW 253 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHHC
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHhc
Confidence 5779999999 7999999999888877765 2456667765 799999988889999999984
No 150
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.74 E-value=0.00099 Score=54.26 Aligned_cols=93 Identities=9% Similarity=-0.006 Sum_probs=54.8
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHh--hhcCCCCEEEEEecCCcc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWK--IERVSNPTFFIVGLNDHL 156 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~Pvl~i~g~~D~~ 156 (230)
||..|+.++..+ |+.+.+++..|+..-.... ......++.. .... ...-...+++-+|+.|..
T Consensus 298 GGl~AL~~al~~--Pd~Fg~v~s~Sgs~ww~~~---------~~~~~~~l~~----~l~~~~~~~~~lr~~i~~G~~E~~ 362 (411)
T PRK10439 298 GGLAALYAGLHW--PERFGCVLSQSGSFWWPHR---------GGQQEGVLLE----QLKAGEVSARGLRIVLEAGRREPM 362 (411)
T ss_pred HHHHHHHHHHhC--cccccEEEEeccceecCCc---------cCCchhHHHH----HHHhcccCCCCceEEEeCCCCCch
Confidence 999999999998 9999999999984311000 0000001100 0000 111234577778988854
Q ss_pred cChHHHHHHHHHhCCC--cceEEEeCCCCCCCcC
Q psy18021 157 VPPSMMVKLHENSGGI--LKQIVLFESGSHNDTW 188 (230)
Q Consensus 157 v~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~ 188 (230)
+ .+..+++.+.+... ++++.+++| ||....
T Consensus 363 ~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~ 394 (411)
T PRK10439 363 I-MRANQALYAQLHPAGHSVFWRQVDG-GHDALC 394 (411)
T ss_pred H-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH
Confidence 4 35566777766543 477788886 786543
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.72 E-value=0.00053 Score=51.73 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=48.3
Q ss_pred CCCCEEEEEecCCcccChHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCC-C-cHHHHHHHHH
Q psy18021 142 VSNPTFFIVGLNDHLVPPSMMVKLHENSGG--ILKQIVLFESGSHNDTWKC-S-GYYHTISQFL 201 (230)
Q Consensus 142 i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~-~-~~~~~i~~fl 201 (230)
..+|-|+++++.|.+++.+..++..+..+. .+++...++++.|...... + +|++.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 368999999999999999998888776554 2477788899999887654 3 4999998873
No 152
>KOG3975|consensus
Probab=97.32 E-value=0.019 Score=42.83 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=48.6
Q ss_pred HhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCc-HHHHHHHH
Q psy18021 137 WKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSG-YYHTISQF 200 (230)
Q Consensus 137 ~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~f 200 (230)
+.+++-.+-+.+.+|..|..+|.+....+.+.++..+.++-. ++..|.......+ ....+.+.
T Consensus 236 e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 236 EYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred HHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHh
Confidence 344454678899999999999999999999999987777776 7889988776665 44555544
No 153
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.23 E-value=0.0039 Score=58.38 Aligned_cols=165 Identities=11% Similarity=0.022 Sum_probs=94.5
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGA 81 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~ 81 (230)
.+.++++||++++. ..|..+...+.. ++.|+.++++|++.+. ||.
T Consensus 1068 ~~~l~~lh~~~g~~-~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~ 1145 (1296)
T PRK10252 1068 GPTLFCFHPASGFA-WQFSVLSRYLDP-QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGT 1145 (1296)
T ss_pred CCCeEEecCCCCch-HHHHHHHHhcCC-CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhH
Confidence 45799999999984 455566666644 7999999999998653 999
Q ss_pred HHHHHHhCCC-CccccceEEEecCCCCHH-------------HHHHHhh--hhhhcccccccccc-------cCccc---
Q psy18021 82 VAIDLLARPE-YASKIWCLIVENTFTSIP-------------DMALILL--KWNVLRKMPLFCFK-------NKFLS--- 135 (230)
Q Consensus 82 ~a~~~a~~~~-~~~~i~~~i~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~-------~~~~~--- 135 (230)
+|..+|.... .+.++..++++.++.... ....... .............. ..+..
T Consensus 1146 vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1225 (1296)
T PRK10252 1146 LAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADAVR 1225 (1296)
T ss_pred HHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence 9999887521 157888888877643210 0000000 00000000000000 00000
Q ss_pred ---HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhc
Q psy18021 136 ---HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 136 ---~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 205 (230)
......+.+|++++.+..|..........+.+.. + +.+++.++ ++|..+...+ ....+.+++.+.+
T Consensus 1226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~-~~~~~~v~-g~H~~~~~~~-~~~~~~~~l~~~l 1294 (1296)
T PRK10252 1226 LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-A-ELDVYRQD-CAHVDIISPE-AFEKIGPILRATL 1294 (1296)
T ss_pred HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-C-CCEEEECC-CCHHHHCCcH-HHHHHHHHHHHHh
Confidence 0012345689999999988765554444444443 3 57788886 5898876443 3455666665543
No 154
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.18 E-value=0.00064 Score=51.53 Aligned_cols=100 Identities=15% Similarity=0.035 Sum_probs=54.1
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHH--hhhcCCCCEEEEEecCCcc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHW--KIERVSNPTFFIVGLNDHL 156 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~Pvl~i~g~~D~~ 156 (230)
||..|+.++..+ |+.+.+++..||........... .....|...+.+.... ....-..++.+..|+.|..
T Consensus 125 GG~~Al~~~l~~--Pd~F~~~~~~S~~~~~~~~~w~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~ 196 (251)
T PF00756_consen 125 GGYGALYLALRH--PDLFGAVIAFSGALDPSPSLWGP------SDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEF 196 (251)
T ss_dssp HHHHHHHHHHHS--TTTESEEEEESEESETTHCHHHH------STCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTT
T ss_pred CcHHHHHHHHhC--ccccccccccCccccccccccCc------CCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcc
Confidence 999999999998 99999999999875433111000 0001111111111111 1233356788889999983
Q ss_pred cC----------hHHHHHHHHHhCC--CcceEEEeCCCCCCCc
Q psy18021 157 VP----------PSMMVKLHENSGG--ILKQIVLFESGSHNDT 187 (230)
Q Consensus 157 v~----------~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~ 187 (230)
.. .....++.+.+.. .......++ ++|...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-G~H~~~ 238 (251)
T PF00756_consen 197 GGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFP-GGHDWA 238 (251)
T ss_dssp HHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEH-SESSHH
T ss_pred cccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEec-Cccchh
Confidence 32 1222333333432 135666777 467443
No 155
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.95 E-value=0.032 Score=46.08 Aligned_cols=56 Identities=14% Similarity=0.253 Sum_probs=38.8
Q ss_pred HhhhcCCCCEEEEEecCCcccChHHHHHHHHHh-------CCC--cceEEEeCCCCCCCcCCCCc
Q psy18021 137 WKIERVSNPTFFIVGLNDHLVPPSMMVKLHENS-------GGI--LKQIVLFESGSHNDTWKCSG 192 (230)
Q Consensus 137 ~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~-------~~~--~~~~~~~~~~~H~~~~~~~~ 192 (230)
-.+++|++|+.++.+..|.++|++++..+...+ ... ..-..+-+..||...+....
T Consensus 291 ~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~ 355 (581)
T PF11339_consen 291 VDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGK 355 (581)
T ss_pred eehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccH
Confidence 367899999999999999999999885543322 111 12223446789988766553
No 156
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.84 E-value=0.0017 Score=54.36 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCCchhhH-HHHHHhhccC-CceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNIGHRL-HNVAGLHSML-KCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~-~~~~~~~~~~-g~~vi~~d~r 72 (230)
.|+||++||++....... .....+.... |+.|++++||
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yR 134 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYR 134 (493)
T ss_pred CCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEeccc
Confidence 799999999875432111 1222222233 3999999999
No 157
>COG3150 Predicted esterase [General function prediction only]
Probab=96.73 E-value=0.035 Score=38.80 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=61.2
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhccccc-ccccc-cCccc--HHhhhcCCCC-EEEEEecC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMP-LFCFK-NKFLS--HWKIERVSNP-TFFIVGLN 153 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~--~~~~~~i~~P-vl~i~g~~ 153 (230)
||+.|.+++... .++++++ +|-....+.+......+...+.. .+... ...+. ...+..++.| .+++....
T Consensus 69 GGY~At~l~~~~----Girav~~-NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~~~~~~~l~~p~~~~lL~qt 143 (191)
T COG3150 69 GGYYATWLGFLC----GIRAVVF-NPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLCVLQFRELNRPRCLVLLSQT 143 (191)
T ss_pred hHHHHHHHHHHh----CChhhhc-CCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHHHhhccccCCCcEEEeeccc
Confidence 999999999887 5666554 55454444444444332211211 11111 01111 1223344444 55555555
Q ss_pred -CcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHH
Q psy18021 154 -DHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLA 202 (230)
Q Consensus 154 -D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 202 (230)
|++..+..+.+.+.. +...+.+|+.|....- ..+.+.|+.|..
T Consensus 144 gDEvLDyr~a~a~y~~-----~~~~V~dgg~H~F~~f-~~~l~~i~aF~g 187 (191)
T COG3150 144 GDEVLDYRQAVAYYHP-----CYEIVWDGGDHKFKGF-SRHLQRIKAFKG 187 (191)
T ss_pred ccHHHHHHHHHHHhhh-----hhheeecCCCccccch-HHhHHHHHHHhc
Confidence 999888776665542 5566788888854422 236677777764
No 158
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.72 E-value=0.042 Score=42.22 Aligned_cols=106 Identities=10% Similarity=0.033 Sum_probs=56.5
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcccC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVP 158 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v~ 158 (230)
||.+++..+..+ |.++-.++..||.....-. ...+........+....+..-..-++...++.+.+.+
T Consensus 187 GG~vsL~agl~~--Pe~FG~V~s~Sps~~~~~~----------~~~~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~ 254 (299)
T COG2382 187 GGLVSLYAGLRH--PERFGHVLSQSGSFWWTPL----------DTQPQGEVAESLKILHAIGTDERIVLTTGGEEGDFLR 254 (299)
T ss_pred ccHHHHHHHhcC--chhhceeeccCCccccCcc----------ccccccchhhhhhhhhccCccceEEeecCCccccccc
Confidence 999999999999 9999999998885331100 0000000000011111122212223333344444454
Q ss_pred hHHHHHHHHHhCCC--cceEEEeCCCCCCCcCCCCcHHHHHHH
Q psy18021 159 PSMMVKLHENSGGI--LKQIVLFESGSHNDTWKCSGYYHTISQ 199 (230)
Q Consensus 159 ~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~i~~ 199 (230)
+ .+++++.+.+. +..+..|+| ||...+-.+.+.+.+..
T Consensus 255 p--Nr~L~~~L~~~g~~~~yre~~G-gHdw~~Wr~~l~~~L~~ 294 (299)
T COG2382 255 P--NRALAAQLEKKGIPYYYREYPG-GHDWAWWRPALAEGLQL 294 (299)
T ss_pred h--hHHHHHHHHhcCCcceeeecCC-CCchhHhHHHHHHHHHH
Confidence 4 34455555432 467788998 99877766655554443
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.63 E-value=0.0046 Score=48.86 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCc--hhhHHHHHH-hhcc--CCceEEEEeccCC
Q psy18021 35 TMTLVYLHGNAGNI--GHRLHNVAG-LHSM--LKCNVLMVEYRGY 74 (230)
Q Consensus 35 ~p~vv~~HG~~~~~--~~~~~~~~~-~~~~--~g~~vi~~d~rG~ 74 (230)
+|++|++|||.++. ..+...+.+ ++.. .+++||++||...
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~ 115 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG 115 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh
Confidence 89999999999986 245555444 4555 5899999999643
No 160
>KOG3101|consensus
Probab=96.61 E-value=0.013 Score=42.61 Aligned_cols=50 Identities=16% Similarity=0.168 Sum_probs=34.2
Q ss_pred EEecCCCcccCCCCcEEEEEcCCCCCchhhH--HHHHHhhccCCceEEEEecc
Q psy18021 22 YFIPQPDVKAKCETMTLVYLHGNAGNIGHRL--HNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 22 ~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~g~~vi~~d~r 72 (230)
.++|+.....+. -|++.++.|.+.+...+. ..+.+...++|..|+.+|-.
T Consensus 32 vylPp~a~~~k~-~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTS 83 (283)
T KOG3101|consen 32 VYLPPDAPRGKR-CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTS 83 (283)
T ss_pred EecCCCcccCCc-CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCC
Confidence 455555444333 689999999998854322 34455567889999999974
No 161
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.61 E-value=0.27 Score=39.68 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=29.4
Q ss_pred CCEEEEEecCCcccChHHHHHHHHHhCCC--cceEEEeC
Q psy18021 144 NPTFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLFE 180 (230)
Q Consensus 144 ~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~ 180 (230)
+-....|+..|..+|.+.-+++++.+..- +++++.++
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk 332 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK 332 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 44566799999999999999988877652 57888883
No 162
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.54 E-value=0.038 Score=41.51 Aligned_cols=44 Identities=23% Similarity=0.335 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc--eEEEEeccCCcCCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC--NVLMVEYRGYGKSQ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~--~vi~~d~rG~G~s~ 78 (230)
+.++||+||+..+...-....+++....++ .++.|.||..|.-.
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~ 63 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLL 63 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChh
Confidence 569999999999976555555555444444 79999999887643
No 163
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.20 E-value=0.02 Score=47.65 Aligned_cols=64 Identities=11% Similarity=0.175 Sum_probs=51.0
Q ss_pred CCCCEEEEEecCCcccChHHHHHHHHHhCCC----------cceEEEeCCCCCCCcCCCC---cHHHHHHHHHHHhc
Q psy18021 142 VSNPTFFIVGLNDHLVPPSMMVKLHENSGGI----------LKQIVLFESGSHNDTWKCS---GYYHTISQFLAKAN 205 (230)
Q Consensus 142 i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~H~~~~~~~---~~~~~i~~fl~~~~ 205 (230)
-.-.+++.||..|.++|+..+..+++++... -.+++.+||.+|+..-..+ +....+.+|+++=.
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 3467999999999999999888888765431 2588999999999875533 58888999998744
No 164
>KOG1551|consensus
Probab=96.19 E-value=0.095 Score=39.60 Aligned_cols=57 Identities=16% Similarity=0.206 Sum_probs=44.9
Q ss_pred EEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCC--CcHHHHHHHHHHHhc
Q psy18021 146 TFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKC--SGYYHTISQFLAKAN 205 (230)
Q Consensus 146 vl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~i~~fl~~~~ 205 (230)
+.++.+++|.++|......+.+.-+ ++++..++ +||...+.- +.+...|.+-|++.-
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC--CCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 6788899999999988888877777 58888888 689876443 348888888887753
No 165
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.13 E-value=0.011 Score=42.45 Aligned_cols=64 Identities=17% Similarity=0.247 Sum_probs=47.3
Q ss_pred hcC-CCCEEEEEecCCcccChHHHHHHHHHhC---CCcceEEEeCCCCCCCcCCCCc----HHHHHHHHHHH
Q psy18021 140 ERV-SNPTFFIVGLNDHLVPPSMMVKLHENSG---GILKQIVLFESGSHNDTWKCSG----YYHTISQFLAK 203 (230)
Q Consensus 140 ~~i-~~Pvl~i~g~~D~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~~~----~~~~i~~fl~~ 203 (230)
+.| ++++|-|-|++|+|....+.....+... ...+..++.+++||...+..+. +.-.|.+||.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 344 5788889999999999987776665443 3356778889999999988774 45556666653
No 166
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.01 E-value=0.0067 Score=44.90 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=26.4
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCce---EEEEeccCCcC
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCN---VLMVEYRGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~---vi~~d~rG~G~ 76 (230)
+|||+||.+++....|..+++.|.++||. +++++|-....
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~ 45 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNG 45 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCC
Confidence 59999999997677788888889999999 79999854433
No 167
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=95.87 E-value=0.23 Score=37.38 Aligned_cols=61 Identities=16% Similarity=0.152 Sum_probs=45.3
Q ss_pred CCCEEEEEecC------CcccChHHHHHHHHHhCCCcceE--EEeC--CCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 143 SNPTFFIVGLN------DHLVPPSMMVKLHENSGGILKQI--VLFE--SGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 143 ~~Pvl~i~g~~------D~~v~~~~~~~~~~~~~~~~~~~--~~~~--~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
+..+|+|.|+- |..||...+...+..+.+..+.. .+++ .+.|.-+.+.+.+.+.+.+||-+
T Consensus 216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHHHHHHHhhc
Confidence 46799999986 45688888888877777532322 2344 48999998888899999999865
No 168
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=95.80 E-value=0.067 Score=39.96 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=46.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhh-------ccCCceEEEEeccCCcCCC-----------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLH-------SMLKCNVLMVEYRGYGKSQ----------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~-------~~~g~~vi~~d~rG~G~s~----------------------------- 78 (230)
+.+|||+||.+++...+........ ....+.+++.|+......-
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~ 83 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRPP 83 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccCC
Confidence 4579999999998654443332221 2235789999987642211
Q ss_pred -----------cHHHHHHHHhCCCC-ccccceEEEecCCC
Q psy18021 79 -----------GGAVAIDLLARPEY-ASKIWCLIVENTFT 106 (230)
Q Consensus 79 -----------Gg~~a~~~a~~~~~-~~~i~~~i~~~~~~ 106 (230)
||.++-.++..... +..++.+|..+...
T Consensus 84 ~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 84 PRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 88887777765532 45788988876543
No 169
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.62 E-value=0.028 Score=36.89 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=19.0
Q ss_pred CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhH
Q psy18021 15 DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRL 52 (230)
Q Consensus 15 dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~ 52 (230)
+|..++.....++... ..++|++|||+++...+.
T Consensus 76 ~g~~iHFih~rs~~~~----aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPN----AIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp TTEEEEEEEE--S-TT-----EEEEEE--SS--GGGGH
T ss_pred eeEEEEEEEeeCCCCC----CeEEEEECCCCccHHhHH
Confidence 5888887777765543 567999999999954443
No 170
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.53 E-value=0.038 Score=46.74 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCCchh---hHHHHHHhhccCCceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNIGH---RLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~---~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.|++|++||++-.... ....-..++++.++.||+++||
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYR 165 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYR 165 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE---
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEeccc
Confidence 7999999998854321 1222233456789999999999
No 171
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.36 E-value=0.27 Score=41.02 Aligned_cols=61 Identities=13% Similarity=-0.007 Sum_probs=48.2
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhC-------------------C---------C-----cceEEEeCCCCCCCcCC
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSG-------------------G---------I-----LKQIVLFESGSHNDTWK 189 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~-------------------~---------~-----~~~~~~~~~~~H~~~~~ 189 (230)
.++||+..|+.|.+++....+++.+.++ + . +.+++.+.++||....+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999999988877776554 0 1 24566778999999999
Q ss_pred CCc-HHHHHHHHHHH
Q psy18021 190 CSG-YYHTISQFLAK 203 (230)
Q Consensus 190 ~~~-~~~~i~~fl~~ 203 (230)
.|+ ..+.|..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 985 77888888854
No 172
>KOG4840|consensus
Probab=95.12 E-value=0.4 Score=35.39 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=52.1
Q ss_pred EEEEEcCCCCCc--hhhHHHHHHhhccCCceEEEEecc----CCcCCC-------------------------------c
Q psy18021 37 TLVYLHGNAGNI--GHRLHNVAGLHSMLKCNVLMVEYR----GYGKSQ-------------------------------G 79 (230)
Q Consensus 37 ~vv~~HG~~~~~--~~~~~~~~~~~~~~g~~vi~~d~r----G~G~s~-------------------------------G 79 (230)
-|||+-|.+... -.+...+...+.+.+|.++.+-+| |+|.+. |
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTG 117 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTG 117 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCcc
Confidence 578887777654 235566777788889999888766 566665 8
Q ss_pred HHHHHHHHhCCCCccccceEEEecCCCCH
Q psy18021 80 GAVAIDLLARPEYASKIWCLIVENTFTSI 108 (230)
Q Consensus 80 g~~a~~~a~~~~~~~~i~~~i~~~~~~~~ 108 (230)
+.-.+++....-.+..+++.|+.+|..+.
T Consensus 118 cQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 118 CQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred chHHHHHHHhccchHHHHHHHHhCccchh
Confidence 88888777444346778888999997664
No 173
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.69 E-value=0.085 Score=40.12 Aligned_cols=70 Identities=24% Similarity=0.303 Sum_probs=51.6
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------cHHH
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------GGAV 82 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------Gg~~ 82 (230)
|++.++|+.++. ...+..++..+... ..|+.++.||++.-. ||.+
T Consensus 1 ~pLF~fhp~~G~-~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~v 78 (257)
T COG3319 1 PPLFCFHPAGGS-VLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAV 78 (257)
T ss_pred CCEEEEcCCCCc-HHHHHHHHHHhccC-ceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHH
Confidence 469999999999 44555555566664 899999999997332 9999
Q ss_pred HHHHHhCCCC-ccccceEEEecCCCC
Q psy18021 83 AIDLLARPEY-ASKIWCLIVENTFTS 107 (230)
Q Consensus 83 a~~~a~~~~~-~~~i~~~i~~~~~~~ 107 (230)
|..+|.+-+. -..+..++++.+...
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9998876532 236888888777555
No 174
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.22 E-value=0.075 Score=43.70 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCch----hhHHHHHHhhccCC-ceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNIG----HRLHNVAGLHSMLK-CNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~----~~~~~~~~~~~~~g-~~vi~~d~r 72 (230)
.|++|+|||++-... ..++.. .|+++| +.|++++||
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs--~La~~g~vVvVSvNYR 134 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGS--ALAARGDVVVVSVNYR 134 (491)
T ss_pred CcEEEEEeccccccCCCcccccChH--HHHhcCCEEEEEeCcc
Confidence 799999999974332 223322 356667 999999999
No 175
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.09 E-value=0.69 Score=37.83 Aligned_cols=60 Identities=12% Similarity=-0.040 Sum_probs=44.6
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC------------------------CcceEEEeCCCCCCCcCCCCc-HHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG------------------------ILKQIVLFESGSHNDTWKCSG-YYHTI 197 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~H~~~~~~~~-~~~~i 197 (230)
.++||+.+|..|.+++....+.+.+.+.= .+.+++.+.+|||....+.|+ ..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 48999999999999999999998887631 123678899999999999985 67778
Q ss_pred HHHHH
Q psy18021 198 SQFLA 202 (230)
Q Consensus 198 ~~fl~ 202 (230)
.+||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.50 E-value=0.32 Score=40.23 Aligned_cols=70 Identities=24% Similarity=0.206 Sum_probs=43.2
Q ss_pred CcEEEEEcCCCCCchh---hHHHHHHhhccCCceEEEEeccCCcCCC---------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGH---RLHNVAGLHSMLKCNVLMVEYRGYGKSQ--------------------------------- 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~---~~~~~~~~~~~~g~~vi~~d~rG~G~s~--------------------------------- 78 (230)
.|++|++-| -+.... ....+.++..+.|-.++++++|-+|+|.
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 466666644 444322 1224455556678899999999999998
Q ss_pred ---------------cHHHHHHHHhCCCCccccceEEEecCCCC
Q psy18021 79 ---------------GGAVAIDLLARPEYASKIWCLIVENTFTS 107 (230)
Q Consensus 79 ---------------Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~ 107 (230)
||.+|..+-..+ |+.+.+.+..++...
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~ky--P~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKY--PHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH---TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhC--CCeeEEEEeccceee
Confidence 788888888888 999999999887553
No 177
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.45 E-value=2.3 Score=31.41 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=28.2
Q ss_pred EEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcC
Q psy18021 147 FFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTW 188 (230)
Q Consensus 147 l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 188 (230)
..+.|++|.+.|++..++..+.. ..+..++ ++|+++.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~----~~~~~~~-~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR----CTIVEID-APHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc----CcEEEec-CCCcCch
Confidence 37889999999999988888643 3455565 7998764
No 178
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=93.14 E-value=0.25 Score=41.16 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=38.0
Q ss_pred CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHh-----------h------ccCCceEEEEec-cCCcCC
Q psy18021 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGL-----------H------SMLKCNVLMVEY-RGYGKS 77 (230)
Q Consensus 16 g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~-----------~------~~~g~~vi~~d~-rG~G~s 77 (230)
+..+..|++.....+ +. .|+||+++|+++... +...+.+. + -..-.+++.+|. +|+|.|
T Consensus 60 ~~~lFyw~~~s~~~~-~~-~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S 136 (462)
T PTZ00472 60 DKHYFYWAFGPRNGN-PE-APVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFS 136 (462)
T ss_pred CceEEEEEEEcCCCC-CC-CCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcc
Confidence 567888888765432 22 799999999998843 33222111 0 011357888997 488877
Q ss_pred C
Q psy18021 78 Q 78 (230)
Q Consensus 78 ~ 78 (230)
.
T Consensus 137 ~ 137 (462)
T PTZ00472 137 Y 137 (462)
T ss_pred c
Confidence 5
No 179
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.64 E-value=0.47 Score=37.54 Aligned_cols=60 Identities=10% Similarity=0.094 Sum_probs=47.0
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC----------------------Cc-ceEEEeCCCCCCCcCCCCc-HHHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG----------------------IL-KQIVLFESGSHNDTWKCSG-YYHTIS 198 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~~~~~-~~~~i~ 198 (230)
.++||+..|+.|.+++.-..+++.+.+.= .+ .++..+.+|||... ..|+ ..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 58999999999999999888888877651 12 46677789999986 4674 667788
Q ss_pred HHHHH
Q psy18021 199 QFLAK 203 (230)
Q Consensus 199 ~fl~~ 203 (230)
.||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 88854
No 180
>COG0627 Predicted esterase [General function prediction only]
Probab=92.58 E-value=0.89 Score=35.86 Aligned_cols=121 Identities=16% Similarity=0.016 Sum_probs=64.6
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHh--hhhh--------hcccc--cccccccCcccHHhhhc-----
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALIL--LKWN--------VLRKM--PLFCFKNKFLSHWKIER----- 141 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~--~~~~--------~~~~~--~~~~~~~~~~~~~~~~~----- 141 (230)
||.=|+.+|..+ |++++.+...+|+.+........ +... .+... +.|. .+++...+.+
T Consensus 162 GG~GAl~lA~~~--pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~---~~D~~~~~~~l~~~~ 236 (316)
T COG0627 162 GGYGALKLALKH--PDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQ---ENDPLSLIEKLVANA 236 (316)
T ss_pred cchhhhhhhhhC--cchhceeccccccccccccccccccccccccCccHHHhcCCCcccccc---ccCchhHHHHhhhcc
Confidence 788888888888 78888888888876544111000 0000 00000 0111 2223222221
Q ss_pred ---------CCCCEEEEEecCCcccC--hHHHHHHHHHhCC--CcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhc
Q psy18021 142 ---------VSNPTFFIVGLNDHLVP--PSMMVKLHENSGG--ILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 142 ---------i~~Pvl~i~g~~D~~v~--~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 205 (230)
...++++-+|..|.+.. ....+.+.+++.. .+..+...+++.|...+-.. ..+....|+...+
T Consensus 237 ~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~~-~l~~~~~~~a~~l 312 (316)
T COG0627 237 NTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFWAS-QLADHLPWLAGAL 312 (316)
T ss_pred cccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHHHH-HHHHHHHHHHHHh
Confidence 34667777888888865 2234555555542 13677777788886554333 3344555655544
No 181
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=91.99 E-value=1.8 Score=31.02 Aligned_cols=79 Identities=18% Similarity=0.111 Sum_probs=53.1
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec--------cCCcCCC---------cHHHHHHHHhCCCCcccc
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY--------RGYGKSQ---------GGAVAIDLLARPEYASKI 96 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~--------rG~G~s~---------Gg~~a~~~a~~~~~~~~i 96 (230)
+|.+|++-|..++..+ ....+.+.|.+.|++++.+|= ++.|.|. =|.+|-.++... .|
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dLgFs~edR~eniRRvaevAkll~daG----~i 97 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDLGFSREDRIENIRRVAEVAKLLADAG----LI 97 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCCCCChHHHHHHHHHHHHHHHHHHHCC----eE
Confidence 6789999999999754 445566678888999999983 3444444 344444444433 44
Q ss_pred ceEEEecCCCCHHHHHHHhhh
Q psy18021 97 WCLIVENTFTSIPDMALILLK 117 (230)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~ 117 (230)
.-.-++||+...+++.+....
T Consensus 98 viva~ISP~r~~R~~aR~~~~ 118 (197)
T COG0529 98 VIVAFISPYREDRQMARELLG 118 (197)
T ss_pred EEEEeeCccHHHHHHHHHHhC
Confidence 444567777777777766654
No 182
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=91.55 E-value=0.24 Score=39.32 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=42.7
Q ss_pred hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCc
Q psy18021 140 ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDT 187 (230)
Q Consensus 140 ~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 187 (230)
.++..|-.++.++.|++.+++.+.-+++.+++. +-+.++|++.|...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmvPN~~H~~~ 372 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMVPNDPHNLI 372 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCc-eeeeeCCCCcchhh
Confidence 667899999999999999999999999999985 88999999999655
No 183
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=90.94 E-value=0.39 Score=39.28 Aligned_cols=66 Identities=14% Similarity=0.215 Sum_probs=37.4
Q ss_pred EEEcc--CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCchhhHHHHHHh----hc--------------cCCceEEEE
Q psy18021 10 FVKSL--DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGL----HS--------------MLKCNVLMV 69 (230)
Q Consensus 10 ~~~~~--dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~----~~--------------~~g~~vi~~ 69 (230)
++... .+..+..|+++..+.+ +. +|+||++.|++++.. ++..+.+. +. ..-.+++.+
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~-~~-~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDP-ED-DPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGG-CS-S-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEecCCCCCcEEEEEEEEeCCCC-CC-ccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccccceEEE
Confidence 34444 5678888888876633 33 899999999999843 33333221 01 113678999
Q ss_pred ecc-CCcCCC
Q psy18021 70 EYR-GYGKSQ 78 (230)
Q Consensus 70 d~r-G~G~s~ 78 (230)
|.| |.|-|.
T Consensus 92 D~PvGtGfS~ 101 (415)
T PF00450_consen 92 DQPVGTGFSY 101 (415)
T ss_dssp --STTSTT-E
T ss_pred eecCceEEee
Confidence 965 888886
No 184
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=88.50 E-value=1.9 Score=35.75 Aligned_cols=60 Identities=10% Similarity=0.094 Sum_probs=46.9
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC----------------------Cc-ceEEEeCCCCCCCcCCCCc-HHHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG----------------------IL-KQIVLFESGSHNDTWKCSG-YYHTIS 198 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~~~~~-~~~~i~ 198 (230)
.++||+..|+.|.+++.-..+++.+.++= .+ .++..+.+|||... ..|+ ..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 58999999999999999988888876641 11 46677889999996 4675 667788
Q ss_pred HHHHH
Q psy18021 199 QFLAK 203 (230)
Q Consensus 199 ~fl~~ 203 (230)
.||..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 88854
No 185
>KOG1282|consensus
Probab=88.35 E-value=2.2 Score=35.44 Aligned_cols=61 Identities=11% Similarity=0.001 Sum_probs=47.4
Q ss_pred CCEEEEEecCCcccChHHHHHHHHHhCC-----------------------CcceEEEeCCCCCCCcCCCCc-HHHHHHH
Q psy18021 144 NPTFFIVGLNDHLVPPSMMVKLHENSGG-----------------------ILKQIVLFESGSHNDTWKCSG-YYHTISQ 199 (230)
Q Consensus 144 ~Pvl~i~g~~D~~v~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~H~~~~~~~~-~~~~i~~ 199 (230)
.++++..|+.|.++|....+.+.+.+.- .+..+..+.||||......|+ ....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999999888887655431 012446778999999998886 6688888
Q ss_pred HHHHh
Q psy18021 200 FLAKA 204 (230)
Q Consensus 200 fl~~~ 204 (230)
||...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 98753
No 186
>PLN02209 serine carboxypeptidase
Probab=86.95 E-value=2.6 Score=34.97 Aligned_cols=60 Identities=8% Similarity=0.060 Sum_probs=47.0
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC----------------------Cc-ceEEEeCCCCCCCcCCCCc-HHHHHH
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG----------------------IL-KQIVLFESGSHNDTWKCSG-YYHTIS 198 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~~~~~-~~~~i~ 198 (230)
.++||+..|+.|-+++.-..+++.+.++= .+ .++..+.+|||... ..|+ ..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 47999999999999999888888877641 12 46677889999985 4775 667788
Q ss_pred HHHHH
Q psy18021 199 QFLAK 203 (230)
Q Consensus 199 ~fl~~ 203 (230)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 88853
No 187
>KOG2521|consensus
Probab=85.58 E-value=17 Score=29.19 Aligned_cols=66 Identities=17% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCCC--cceEEEeCCCCCCCcCCC-C-cHHHHHHHHHHHhcccC
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGGI--LKQIVLFESGSHNDTWKC-S-GYYHTISQFLAKANDFL 208 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~-~-~~~~~i~~fl~~~~~~~ 208 (230)
..+.+.+.+..|.++|....+++.+..... +++..-+.++.|...+.. | .+++...+|+.......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 578899999999999999999986655532 355556677888876543 4 59999999999877543
No 188
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=85.42 E-value=1.8 Score=34.60 Aligned_cols=71 Identities=20% Similarity=0.172 Sum_probs=50.1
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCce---EEEEeccCCcCCC--------------------------------cHH
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCN---VLMVEYRGYGKSQ--------------------------------GGA 81 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~---vi~~d~rG~G~s~--------------------------------Gg~ 81 (230)
+++++||+..... .+..+...+...|+. +..+++++-.... ||.
T Consensus 61 pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~ 139 (336)
T COG1075 61 PIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGL 139 (336)
T ss_pred eEEEEccCcCCcc-hhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccch
Confidence 7999999866633 344444446666777 8888887552221 999
Q ss_pred HHHHHHhCCCCccccceEEEecCCCCH
Q psy18021 82 VAIDLLARPEYASKIWCLIVENTFTSI 108 (230)
Q Consensus 82 ~a~~~a~~~~~~~~i~~~i~~~~~~~~ 108 (230)
+...++.....+.+++.++.+++...-
T Consensus 140 ~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 140 DSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred hhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999888888444789999998886543
No 189
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.19 E-value=4 Score=29.02 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=57.3
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcC-CCCEEEEEecCCccc
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERV-SNPTFFIVGLNDHLV 157 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~v 157 (230)
||..|..+.-+. |+...++|..++.-+..+.+...+.-...-..|.-...... ....+.++ .+...+..|..|+..
T Consensus 111 GayhA~nfvfrh--P~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~-dp~~l~rlr~~~~vfc~G~e~~~L 187 (227)
T COG4947 111 GAYHAANFVFRH--PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLA-DPFRLERLRRIDMVFCIGDEDPFL 187 (227)
T ss_pred hhhhhhhhheeC--hhHhhhheeecceeeHHHhccccccCceeecChhhhccCCc-ChHHHHHHhhccEEEEecCccccc
Confidence 777777777777 99999999999988877666555543332222222222111 22233333 356777788888876
Q ss_pred ChHHHHHHHHHhCCC--cceEEEeCCCCCC
Q psy18021 158 PPSMMVKLHENSGGI--LKQIVLFESGSHN 185 (230)
Q Consensus 158 ~~~~~~~~~~~~~~~--~~~~~~~~~~~H~ 185 (230)
+.. +++.+.+... +..+.+..+..|.
T Consensus 188 ~~~--~~L~~~l~dKqipaw~~~WggvaHd 215 (227)
T COG4947 188 DNN--QHLSRLLSDKQIPAWMHVWGGVAHD 215 (227)
T ss_pred cch--HHHHHHhccccccHHHHHhcccccc
Confidence 643 2333333321 2444445544453
No 190
>KOG3967|consensus
Probab=85.11 E-value=5.9 Score=29.31 Aligned_cols=24 Identities=21% Similarity=0.535 Sum_probs=16.3
Q ss_pred cHHHHHHHHhCCCCccccceEEEe
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVE 102 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~ 102 (230)
||...+.+..+....++|.++.+.
T Consensus 200 GG~~t~~l~~~f~~d~~v~aialT 223 (297)
T KOG3967|consen 200 GGSLTLDLVERFPDDESVFAIALT 223 (297)
T ss_pred CChhHHHHHHhcCCccceEEEEee
Confidence 888888888777444566666553
No 191
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=84.40 E-value=0.74 Score=37.32 Aligned_cols=66 Identities=23% Similarity=0.175 Sum_probs=50.0
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------ 78 (230)
+|+|++.-|++.+......-...++ +-+-+.+++|-++.|.
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 7899999999887433333344443 3478899999999998
Q ss_pred ----cHHHHHHHHhCCCCccccceEEEecCC
Q psy18021 79 ----GGAVAIDLLARPEYASKIWCLIVENTF 105 (230)
Q Consensus 79 ----Gg~~a~~~a~~~~~~~~i~~~i~~~~~ 105 (230)
||++++..=.-+ |+.+++.|.....
T Consensus 140 G~SKGGmTa~y~rrFy--P~DVD~tVaYVAP 168 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFY--PDDVDGTVAYVAP 168 (448)
T ss_pred CcCCCceeEEEEeeeC--CCCCCeeeeeecc
Confidence 899888877777 9999999885443
No 192
>PLN02633 palmitoyl protein thioesterase family protein
Probab=83.79 E-value=19 Score=28.33 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=41.5
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhcc-CCceEEEEeccCCcCC-C---------------------------------cH
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSM-LKCNVLMVEYRGYGKS-Q---------------------------------GG 80 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~-~g~~vi~~d~rG~G~s-~---------------------------------Gg 80 (230)
++|+.||.|.+... -...+.+++.+ .|.-+.++.. |-+.. + ||
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGG 105 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGRSQGN 105 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEEEccch
Confidence 58999999987532 33444444433 2555555554 22222 1 88
Q ss_pred HHHHHHHhCCCCccccceEEEecC
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
.++-.++......+.|+.+|..++
T Consensus 106 lflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 106 LVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred HHHHHHHHHCCCCCCcceEEEecC
Confidence 888888888832136999998765
No 193
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=82.79 E-value=1.1 Score=38.21 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=34.3
Q ss_pred CCCEEEEEecCCcccChHHHHHHHHHhCC------CcceEEEeCCCCCCCcC
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHENSGG------ILKQIVLFESGSHNDTW 188 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~H~~~~ 188 (230)
..|.+++||..|.++|..+.-+-|-.+.. ...+++.++++.|+..+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 58999999999999998655444433321 14688889999998754
No 194
>KOG2182|consensus
Probab=82.02 E-value=6.2 Score=32.99 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCCCchh----hHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 35 TMTLVYLHGNAGNIGH----RLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~----~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
.|+.|+|-|-+.-... ....+....++.|-.|+..++|-+|.|.
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~ 133 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSS 133 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCC
Confidence 6788888776654211 1123334456678899999999999876
No 195
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.18 E-value=10 Score=30.49 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc--eEEEEeccCCcC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC--NVLMVEYRGYGK 76 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~--~vi~~d~rG~G~ 76 (230)
+.++||+||+..+...-....++.....|+ ..+.+-|+-.|.
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~ 159 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGS 159 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCe
Confidence 569999999999865544555555544454 467777775554
No 196
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=79.62 E-value=2.9 Score=34.73 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=40.8
Q ss_pred hhhHHHHHHhhccCCceEEEEeccCCcCCC------------------------------------cHHHHHHHHhCCCC
Q psy18021 49 GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ------------------------------------GGAVAIDLLARPEY 92 (230)
Q Consensus 49 ~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~------------------------------------Gg~~a~~~a~~~~~ 92 (230)
..++..+.+.|.+.||.+ ..|++|+|.+. ||.++..++...
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~-- 183 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH-- 183 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC--
Confidence 356677777889999866 78999988755 999999888765
Q ss_pred cc----ccceEEEecCC
Q psy18021 93 AS----KIWCLIVENTF 105 (230)
Q Consensus 93 ~~----~i~~~i~~~~~ 105 (230)
++ .|+.+|.+++.
T Consensus 184 p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CHhHHhHhccEEEECCC
Confidence 43 47888887663
No 197
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=77.87 E-value=3.3 Score=27.81 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=17.6
Q ss_pred CcEEEEEcCCCCCchhhH-HHHHHh
Q psy18021 35 TMTLVYLHGNAGNIGHRL-HNVAGL 58 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~-~~~~~~ 58 (230)
+|.|+-+||++|....+. ..+++.
T Consensus 52 KpLVlSfHG~tGtGKn~v~~liA~~ 76 (127)
T PF06309_consen 52 KPLVLSFHGWTGTGKNFVSRLIAEH 76 (127)
T ss_pred CCEEEEeecCCCCcHHHHHHHHHHH
Confidence 789999999999975543 344444
No 198
>KOG2541|consensus
Probab=77.60 E-value=13 Score=28.62 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=43.2
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhcc-CCceEEEEeccCCc--CCC--------------------------------cH
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSM-LKCNVLMVEYRGYG--KSQ--------------------------------GG 80 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~-~g~~vi~~d~rG~G--~s~--------------------------------Gg 80 (230)
++|++||.+..... ....+.+++.+ .|..+.++|. |-| .|. ||
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGg 103 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGG 103 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcchhccCceEEEEEcccc
Confidence 58999999987532 22333333333 4778888885 555 333 88
Q ss_pred HHHHHHHhCCCCccccceEEEecC
Q psy18021 81 AVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 81 ~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
.++-.++...+. +.++..|..++
T Consensus 104 lv~Raliq~cd~-ppV~n~ISL~g 126 (296)
T KOG2541|consen 104 LVARALIQFCDN-PPVKNFISLGG 126 (296)
T ss_pred HHHHHHHHhCCC-CCcceeEeccC
Confidence 888777777654 57888887655
No 199
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=76.73 E-value=6.8 Score=28.91 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc-eEEEEec
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC-NVLMVEY 71 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~-~vi~~d~ 71 (230)
..+|+++||...+....+..+...+.+.|| .|+....
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v 175 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV 175 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 447778888777766666666666667776 4544443
No 200
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=76.13 E-value=42 Score=27.58 Aligned_cols=41 Identities=12% Similarity=0.013 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
+| .|-+-=++.+ ......+.+.|.+.||.|+.|--.|.|..
T Consensus 185 kp-~I~iTmfGvT-Tp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 185 KP-LIGITMFGVT-TPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred Cc-EEEEECCCCc-HHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 44 5555555555 34566677788899999999999887644
No 201
>KOG2183|consensus
Probab=75.10 E-value=11 Score=30.85 Aligned_cols=67 Identities=22% Similarity=0.278 Sum_probs=49.0
Q ss_pred cEEEEEcCCCCCchhhH---HHHHHhhccCCceEEEEeccCCcCCC----------------------------------
Q psy18021 36 MTLVYLHGNAGNIGHRL---HNVAGLHSMLKCNVLMVEYRGYGKSQ---------------------------------- 78 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~---~~~~~~~~~~g~~vi~~d~rG~G~s~---------------------------------- 78 (230)
.+|+|--|.-++...+. .++.+...+.+--++..+.|-+|+|.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 36888889888753322 23444445667789999999999997
Q ss_pred ----------------cHHHHHHHHhCCCCccccceEEEecC
Q psy18021 79 ----------------GGAVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 79 ----------------Gg~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
||+++..+-..+ |..+.+.+..+.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKY--PHiv~GAlAaSA 200 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKY--PHIVLGALAASA 200 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcC--hhhhhhhhhccC
Confidence 888888887877 888777765443
No 202
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=73.34 E-value=13 Score=26.59 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=28.4
Q ss_pred cCCCCEEEEEecCCccc-ChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 141 RVSNPTFFIVGLNDHLV-PPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 141 ~i~~Pvl~i~g~~D~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
.+.+|+.++.++.|... +......+.+... ...+++.+++ +|+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~~~g-~H~~~~~ 198 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDPDGWRAHWP-LPHTVVDVPG-DHFTMME 198 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCcccccCCCC-CCceeEEccC-chHHHHH
Confidence 45789999999988654 2222222222222 3478888885 6876643
No 203
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=72.37 E-value=46 Score=26.21 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=44.8
Q ss_pred CCCEEEEEecCCcccChHHHHHHHH---HhCCCcceEEEeCCCCCCCcCCCCc----HHHHHHHHHHHhc
Q psy18021 143 SNPTFFIVGLNDHLVPPSMMVKLHE---NSGGILKQIVLFESGSHNDTWKCSG----YYHTISQFLAKAN 205 (230)
Q Consensus 143 ~~Pvl~i~g~~D~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~H~~~~~~~~----~~~~i~~fl~~~~ 205 (230)
++-++-+-|+.|++.-..+.+.... .++...++.+.-++.||...+.... ..-.|.+|+.+..
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d 408 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYD 408 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhC
Confidence 4678899999999977665555444 4443345677889999999887764 4456677777654
No 204
>KOG4388|consensus
Probab=72.21 E-value=4.1 Score=34.81 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCCCc------hhhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 35 TMTLVYLHGNAGNI------GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 35 ~p~vv~~HG~~~~~------~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
+..|+.|||++-.. +.++..+++ ..|+-++.+||.-..+.+
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~---aL~cPiiSVdYSLAPEaP 442 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQ---ALGCPIISVDYSLAPEAP 442 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHH---HhCCCeEEeeeccCCCCC
Confidence 56899999998432 335555554 458999999997665555
No 205
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=72.00 E-value=30 Score=29.21 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=28.3
Q ss_pred cHHHHHHHHhCCCCccccceEEEecCCCCHHHHH
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMA 112 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~ 112 (230)
||..++..|.++ |+..+++|..+|..++....
T Consensus 125 GGRqgl~~AQry--P~dfDGIlAgaPA~~~~~~~ 156 (474)
T PF07519_consen 125 GGRQGLMAAQRY--PEDFDGILAGAPAINWTHLQ 156 (474)
T ss_pred CcchHHHHHHhC--hhhcCeEEeCCchHHHHHHH
Confidence 999999999999 99999999999987765543
No 206
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=70.52 E-value=9.6 Score=26.71 Aligned_cols=79 Identities=14% Similarity=0.057 Sum_probs=43.2
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccC--CcCC------C---------cHHHHHHHHhCCCCcccc
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRG--YGKS------Q---------GGAVAIDLLARPEYASKI 96 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG--~G~s------~---------Gg~~a~~~a~~~~~~~~i 96 (230)
+|.||++-|..++... ....+.+.|.+.|+.++.+|-.. ++.+ . =+.+|-.++... .+
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~lR~~l~~dl~fs~~dR~e~~rr~~~~A~ll~~~G----~i 76 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDNLRHGLNADLGFSKEDREENIRRIAEVAKLLADQG----II 76 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHHHCTTTTTT--SSHHHHHHHHHHHHHHHHHHHHTT----SE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----Ce
Confidence 3689999999999754 33455666778899999997532 2222 2 444554444443 33
Q ss_pred ceEEEecCCCCHHHHHHHhhh
Q psy18021 97 WCLIVENTFTSIPDMALILLK 117 (230)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~ 117 (230)
-=+-+++|+....+.++....
T Consensus 77 vIva~isp~~~~R~~~R~~~~ 97 (156)
T PF01583_consen 77 VIVAFISPYREDREWARELIP 97 (156)
T ss_dssp EEEE----SHHHHHHHHHHHH
T ss_pred EEEeeccCchHHHHHHHHhCC
Confidence 333345565555555555443
No 207
>KOG1282|consensus
Probab=69.18 E-value=12 Score=31.31 Aligned_cols=37 Identities=16% Similarity=0.435 Sum_probs=27.6
Q ss_pred EEEcc--CCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc
Q psy18021 10 FVKSL--DGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI 48 (230)
Q Consensus 10 ~~~~~--dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~ 48 (230)
++... .+..|.+|+++....+.. .|+||.+.|++|..
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~P~~--dPlvLWLnGGPGCS 86 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENNPET--DPLVLWLNGGPGCS 86 (454)
T ss_pred eEECCCCCCceEEEEEEEccCCCCC--CCEEEEeCCCCCcc
Confidence 44444 578999999987644322 78999999999984
No 208
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=68.60 E-value=4.6 Score=32.86 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEec-cCCcCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY-RGYGKS 77 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~-rG~G~s 77 (230)
...-||..|-++= .......++.|+++|+.|+.+|- |.+..-
T Consensus 260 d~~av~~SGDGGW-r~lDk~v~~~l~~~gvpVvGvdsLRYfW~~ 302 (456)
T COG3946 260 DTVAVFYSGDGGW-RDLDKEVAEALQKQGVPVVGVDSLRYFWSE 302 (456)
T ss_pred ceEEEEEecCCch-hhhhHHHHHHHHHCCCceeeeehhhhhhcc
Confidence 3456666665554 45566777889999999999996 555433
No 209
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=67.09 E-value=14 Score=24.47 Aligned_cols=13 Identities=31% Similarity=0.151 Sum_probs=10.2
Q ss_pred HhhccCCceEEEE
Q psy18021 57 GLHSMLKCNVLMV 69 (230)
Q Consensus 57 ~~~~~~g~~vi~~ 69 (230)
..|.+.|+.|+.+
T Consensus 101 ~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 101 SRLQELGWRVLRV 113 (117)
T ss_pred HHHHHCcCEEEEE
Confidence 3477889999876
No 210
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=65.91 E-value=11 Score=23.71 Aligned_cols=27 Identities=19% Similarity=0.062 Sum_probs=17.6
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceE
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNV 66 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~v 66 (230)
+++||+|+.+..+ ...+..|.+.||.+
T Consensus 62 ~~ivv~C~~G~rs-----~~aa~~L~~~G~~~ 88 (100)
T cd01523 62 QEVTVICAKEGSS-----QFVAELLAERGYDV 88 (100)
T ss_pred CeEEEEcCCCCcH-----HHHHHHHHHcCcee
Confidence 6778888755433 33455677889983
No 211
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=63.45 E-value=10 Score=28.29 Aligned_cols=35 Identities=9% Similarity=0.066 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
..||++|.........+..+...+.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 46999998544334466667777889999998764
No 212
>PLN02606 palmitoyl-protein thioesterase
Probab=62.58 E-value=47 Score=26.18 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=19.1
Q ss_pred cHHHHHHHHhCCCCccccceEEEecC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
||.++-.++.+....+.|+.+|..++
T Consensus 105 GglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 105 GNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred hhHHHHHHHHHCCCCCCcceEEEecC
Confidence 88888888888732136999998665
No 213
>PLN02209 serine carboxypeptidase
Probab=59.08 E-value=30 Score=28.88 Aligned_cols=31 Identities=19% Similarity=0.415 Sum_probs=23.1
Q ss_pred CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc
Q psy18021 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI 48 (230)
Q Consensus 16 g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~ 48 (230)
+..+..|+++....+ .. .|+|+++.|++++.
T Consensus 51 ~~~lf~~f~es~~~~-~~-~Pl~lWlnGGPG~S 81 (437)
T PLN02209 51 NVQFFYYFIKSDKNP-QE-DPLIIWLNGGPGCS 81 (437)
T ss_pred CeEEEEEEEecCCCC-CC-CCEEEEECCCCcHH
Confidence 567888888765433 22 79999999999884
No 214
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=58.97 E-value=31 Score=27.23 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=23.6
Q ss_pred EEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 39 VYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 39 v~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
|++-|+.+...+ +... .|.+.||.|+.+|.--.|...
T Consensus 3 iLVtGGAGYIGS--Htv~-~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 3 VLVTGGAGYIGS--HTVR-QLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred EEEecCcchhHH--HHHH-HHHHCCCeEEEEecCCCCCHH
Confidence 556666666332 2233 355679999999987666544
No 215
>KOG1516|consensus
Probab=58.67 E-value=8.3 Score=33.00 Aligned_cols=38 Identities=24% Similarity=0.372 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCchh---h-HHHHHHhhccCCceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNIGH---R-LHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~---~-~~~~~~~~~~~g~~vi~~d~r 72 (230)
.|++|++||++-.... + .......+......|+.+.||
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YR 153 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYR 153 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccc
Confidence 5899999999743222 1 122222345557889999998
No 216
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=56.12 E-value=13 Score=27.56 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=13.3
Q ss_pred CcEEEEEcCCCCCchhh
Q psy18021 35 TMTLVYLHGNAGNIGHR 51 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~ 51 (230)
.-.|||+||..++..++
T Consensus 4 ~hLvV~vHGL~G~~~d~ 20 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADM 20 (217)
T ss_pred CEEEEEeCCCCCCHHHH
Confidence 34899999999995443
No 217
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=55.80 E-value=32 Score=22.12 Aligned_cols=33 Identities=21% Similarity=0.118 Sum_probs=19.6
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
.++||++.++... .....+..|.+.||.+..++
T Consensus 65 ~~vvvyc~~g~~~---~s~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 65 KLFVVYCDGPGCN---GATKAALKLAELGFPVKEMI 97 (110)
T ss_pred CeEEEEECCCCCc---hHHHHHHHHHHcCCeEEEec
Confidence 6788888765422 12333445677799865554
No 218
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=55.30 E-value=96 Score=23.96 Aligned_cols=24 Identities=13% Similarity=-0.036 Sum_probs=16.1
Q ss_pred cHHHHHHHHhCCCCccccceEEEecC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
||.+++.....+ |+.+...++++|
T Consensus 147 GGLfvl~aLL~~--p~~F~~y~~~SP 170 (264)
T COG2819 147 GGLFVLFALLTY--PDCFGRYGLISP 170 (264)
T ss_pred hhHHHHHHHhcC--cchhceeeeecc
Confidence 666666666666 666666666666
No 219
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=54.06 E-value=21 Score=22.69 Aligned_cols=28 Identities=11% Similarity=0.088 Sum_probs=20.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEE
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVL 67 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi 67 (230)
+++||+|..+..+ ...+..|.+.||..+
T Consensus 62 ~~ivv~C~~G~rS-----~~aa~~L~~~G~~~~ 89 (110)
T COG0607 62 DPIVVYCASGVRS-----AAAAAALKLAGFTNV 89 (110)
T ss_pred CeEEEEeCCCCCh-----HHHHHHHHHcCCccc
Confidence 6788888876666 334556778888877
No 220
>KOG2872|consensus
Probab=53.80 E-value=13 Score=28.80 Aligned_cols=29 Identities=10% Similarity=0.271 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
-|.|+|.-|.++. -+.+...||.|+.+||
T Consensus 252 vPmi~fakG~g~~--------Le~l~~tG~DVvgLDW 280 (359)
T KOG2872|consen 252 VPMILFAKGSGGA--------LEELAQTGYDVVGLDW 280 (359)
T ss_pred CceEEEEcCcchH--------HHHHHhcCCcEEeecc
Confidence 4789999987665 2346778999999998
No 221
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=53.36 E-value=25 Score=26.50 Aligned_cols=38 Identities=8% Similarity=0.125 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.|+||++.|+.++. ......+...+..+|+.|.++.-+
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 67899999998875 335555566677888998887754
No 222
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=52.89 E-value=44 Score=27.88 Aligned_cols=31 Identities=26% Similarity=0.466 Sum_probs=23.1
Q ss_pred CCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc
Q psy18021 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI 48 (230)
Q Consensus 16 g~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~ 48 (230)
+..+..|+++....+ +. .|+||.+.|++++.
T Consensus 49 ~~~lfy~f~es~~~~-~~-~P~~lWlnGGPG~S 79 (433)
T PLN03016 49 NVQFFYYFIKSENNP-KE-DPLLIWLNGGPGCS 79 (433)
T ss_pred CeEEEEEEEecCCCc-cc-CCEEEEEcCCCcHH
Confidence 567888888765432 33 79999999999874
No 223
>COG0218 Predicted GTPase [General function prediction only]
Probab=52.89 E-value=90 Score=22.96 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=59.9
Q ss_pred EEEEeccCCcCCC---------cHHHHHHHHhCCCCccccceEEE-ecCCCCHHHHHHHhhhhhhcccccccccccCccc
Q psy18021 66 VLMVEYRGYGKSQ---------GGAVAIDLLARPEYASKIWCLIV-ENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLS 135 (230)
Q Consensus 66 vi~~d~rG~G~s~---------Gg~~a~~~a~~~~~~~~i~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (230)
....|+||||... +..+.-++-.+. .++++++ +.......+.-. ..
T Consensus 72 ~~lVDlPGYGyAkv~k~~~e~w~~~i~~YL~~R~----~L~~vvlliD~r~~~~~~D~--------------------em 127 (200)
T COG0218 72 LRLVDLPGYGYAKVPKEVKEKWKKLIEEYLEKRA----NLKGVVLLIDARHPPKDLDR--------------------EM 127 (200)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHHHhhch----hheEEEEEEECCCCCcHHHH--------------------HH
Confidence 6789999999887 555544444443 4666655 333211111111 12
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHH---HHHHHHhCCC-cc--eEEEeCCCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMM---VKLHENSGGI-LK--QIVLFESGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~---~~~~~~~~~~-~~--~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
.+.+....+|++++.-.-|++-.-+.. ....+.+... .. .++.++...... -++.+..|..|+..
T Consensus 128 ~~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G---i~~l~~~i~~~~~~ 198 (200)
T COG0218 128 IEFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG---IDELKAKILEWLKE 198 (200)
T ss_pred HHHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC---HHHHHHHHHHHhhc
Confidence 445667789999999999998654443 3333333321 11 244444322211 12466666666654
No 224
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=51.58 E-value=15 Score=26.42 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCC--chhhHHHHHHhhccCCceEEEEe
Q psy18021 36 MTLVYLHGNAGN--IGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 36 p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
..||++|.+... .......+...+.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 359999953221 12345566666788999998764
No 225
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=50.88 E-value=24 Score=23.50 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=19.0
Q ss_pred CcEEEEEc-CCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLH-GNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~H-G~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
.++||+|. |+..+ ......|...||.|..+|
T Consensus 87 ~~vvvyC~~~G~rs-----~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 87 PKLLIYCARGGMRS-----QSLAWLLESLGIDVPLLE 118 (128)
T ss_pred CeEEEEeCCCCccH-----HHHHHHHHHcCCceeEeC
Confidence 67899995 44333 122344566799876665
No 226
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=50.53 E-value=28 Score=26.83 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.|+||++.|+.++. ......+...+..+|+.|.++.-+
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 47888888887775 334555555667778888877543
No 227
>KOG2170|consensus
Probab=49.68 E-value=21 Score=28.13 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=14.5
Q ss_pred CcEEEEEcCCCCCchhh
Q psy18021 35 TMTLVYLHGNAGNIGHR 51 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~ 51 (230)
+|.+|-+|||+|+...+
T Consensus 109 KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 109 KPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCeEEEecCCCCCchhH
Confidence 89999999999996543
No 228
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=49.44 E-value=17 Score=27.30 Aligned_cols=38 Identities=8% Similarity=-0.026 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEecc
Q psy18021 35 TMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.|+||++.|+.++.. .....+...+..+|+.|.++.-+
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 568888999888763 34555556677788888888754
No 229
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=46.61 E-value=24 Score=22.18 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=18.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
+++||+|.++..+ ...+..|...||. |+.++
T Consensus 62 ~~ivvyC~~G~rs-----~~a~~~L~~~G~~~v~~l~ 93 (101)
T cd01518 62 KKVLMYCTGGIRC-----EKASAYLKERGFKNVYQLK 93 (101)
T ss_pred CEEEEECCCchhH-----HHHHHHHHHhCCcceeeec
Confidence 5678888764433 2234456677885 65544
No 230
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=45.27 E-value=31 Score=20.48 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=19.0
Q ss_pred CcEEEEEcCCCC-CchhhHHHHHHhhccCCceEEE--EeccCCc
Q psy18021 35 TMTLVYLHGNAG-NIGHRLHNVAGLHSMLKCNVLM--VEYRGYG 75 (230)
Q Consensus 35 ~p~vv~~HG~~~-~~~~~~~~~~~~~~~~g~~vi~--~d~rG~G 75 (230)
.|.++++||+.. .....-.. ...++|+.++. +|+.-||
T Consensus 31 ~~~~~lvhGga~~GaD~iA~~---wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGADRIAAR---WARERGVPVIRFPADWQRHG 71 (71)
T ss_pred CCCEEEEECCCCCCHHHHHHH---HHHHCCCeeEEeCcChhhCC
Confidence 456888898873 31222222 23445765544 3444343
No 231
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=43.57 E-value=40 Score=26.23 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=16.5
Q ss_pred cHHHHHHHHhCCCCccccceEEEecC
Q psy18021 79 GGAVAIDLLARPEYASKIWCLIVENT 104 (230)
Q Consensus 79 Gg~~a~~~a~~~~~~~~i~~~i~~~~ 104 (230)
||.+.-.++.+... ..|+.+|.+++
T Consensus 90 Ggl~lRa~vq~c~~-~~V~nlISlgg 114 (279)
T PF02089_consen 90 GGLFLRAYVQRCND-PPVHNLISLGG 114 (279)
T ss_dssp HHHHHHHHHHH-TS-S-EEEEEEES-
T ss_pred ccHHHHHHHHHCCC-CCceeEEEecC
Confidence 88887777777632 47999998765
No 232
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=42.56 E-value=61 Score=24.98 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=29.7
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
+|.++ |-||.... ....++..|+++|++|+.+|+--.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 46666 77777654 456778888999999999999665443
No 233
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=41.76 E-value=30 Score=24.49 Aligned_cols=35 Identities=20% Similarity=0.022 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
.+.|+++-|.+.+.. .--..+++|.++|+.|..+=
T Consensus 25 ~~~v~il~G~GnNGg-Dgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 25 GPRVLILCGPGNNGG-DGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp T-EEEEEE-SSHHHH-HHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEECCCCChH-HHHHHHHHHHHCCCeEEEEE
Confidence 456888888777633 44455667788899887733
No 234
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=41.44 E-value=54 Score=26.64 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=26.2
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
|||+|...-. .+..+++.|.++|+.|..+-.++.+.
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 7899987655 34557777888899988877666543
No 235
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=40.12 E-value=1.7e+02 Score=22.44 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=33.2
Q ss_pred CCEEEEEecCCcccChHHHHHHHHHhCC---CcceEEEeCCCCCCCcCCCC------c---HHHHHHHHHHHhc
Q psy18021 144 NPTFFIVGLNDHLVPPSMMVKLHENSGG---ILKQIVLFESGSHNDTWKCS------G---YYHTISQFLAKAN 205 (230)
Q Consensus 144 ~Pvl~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~------~---~~~~i~~fl~~~~ 205 (230)
..+++|-=.+|.+= ++..+.+.++. .-.+....+ +.|....... + -.+.|.+|+++.+
T Consensus 164 ~rnLLIkF~~D~iD---qt~~L~~~L~~r~~~~~~~~~L~-G~HLTPl~q~~~~~~g~~ftP~da~~q~~k~~~ 233 (250)
T PF07082_consen 164 RRNLLIKFNDDDID---QTDELEQILQQRFPDMVSIQTLP-GNHLTPLGQDLKWQVGSSFTPLDAVGQWLKQEV 233 (250)
T ss_pred ccceEEEecCCCcc---chHHHHHHHhhhccccceEEeCC-CCCCCcCcCCcCCccCCccCchHHHHHHHHHHH
Confidence 35677888888773 33333333332 124556666 4787653321 1 3577888887654
No 236
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=40.09 E-value=46 Score=21.28 Aligned_cols=31 Identities=16% Similarity=-0.078 Sum_probs=17.1
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce--EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN--VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~--vi~~d 70 (230)
.|+||+|.++..+ ...+..|...||. |..++
T Consensus 67 ~~ivv~C~~G~rs-----~~a~~~L~~~G~~~~v~~l~ 99 (109)
T cd01533 67 TPIVVNCAGRTRS-----IIGAQSLINAGLPNPVAALR 99 (109)
T ss_pred CeEEEECCCCchH-----HHHHHHHHHCCCCcceeEec
Confidence 5677776554322 2234456778884 54443
No 237
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=39.99 E-value=33 Score=26.47 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
..||++|-...+ ......+...+.++||.++.++
T Consensus 231 G~IILmHd~~~T-~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASS-TEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccH-HHHHHHHHHHHHHCCCEEEeHH
Confidence 368999976555 3456666677889999998764
No 238
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=39.84 E-value=46 Score=24.20 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 35 TMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
.++++++||.....- .....+.+.|.+.|..+...-+++.|.
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 578999999876532 223334445677787766666665443
No 239
>TIGR02798 ligK_PcmE 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase. Members of this protein family 4-carboxy-4-hydroxy-2-oxoadipate aldolase, also called 4-oxalocitramalate aldolase. This enzyme of the protocatechuate 4,5-cleavage pathway converts its substrate to pyruvate plus oxaloacetate. Protocatechuate is an intermediate in many pathways for degrading aromatic compounds, including lignin, fluorene, etc. Hara, et al. showed the LigK gene was not only a 4-carboxy-4-hydroxy-2-oxoadipate aldolase but also the enzyme of the following step, oxaloacetate decarboxylase.
Probab=38.47 E-value=1.7e+02 Score=21.97 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=58.1
Q ss_pred cCCceEEEEeccCCcCCC--cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHh
Q psy18021 61 MLKCNVLMVEYRGYGKSQ--GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWK 138 (230)
Q Consensus 61 ~~g~~vi~~d~rG~G~s~--Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (230)
..| .|+.+|..|.-... |+.++..+... .+.++|+.....+..+....-++.......+. . .....
T Consensus 74 ~pG-dVlVid~~g~~~~a~~G~~~a~~a~~~-----G~~GiVidG~vRD~~~i~~l~~Pvfa~g~~p~-----~-~~~~~ 141 (222)
T TIGR02798 74 QEG-DVVVAACTAECEDGYFGDLLATSFQAR-----GCRGLIIDAGVRDVRDLTEMNFPVWSKAIHAK-----G-TVKAT 141 (222)
T ss_pred CCC-eEEEEECCCCcceEeehHHHHHHHHHC-----CCeEEEEecccCCHHHHhhCCCceEEeecCCC-----C-CCCCC
Confidence 334 78889987654433 77777665554 58999998888777766544332111111111 0 01123
Q ss_pred hhcCCCCEE----------EEEecCCcc--cChHHHHHHHHHhC
Q psy18021 139 IERVSNPTF----------FIVGLNDHL--VPPSMMVKLHENSG 170 (230)
Q Consensus 139 ~~~i~~Pvl----------~i~g~~D~~--v~~~~~~~~~~~~~ 170 (230)
...+++|+. +++|+.|-+ +|.+.+++..+...
T Consensus 142 ~~~~nvpv~iggv~V~PGD~i~aD~dGVvviP~~~~~~vl~~a~ 185 (222)
T TIGR02798 142 LGSVNIPVVCANALVNPGDVVVADDDGVVVVPRANAGAVLDAAQ 185 (222)
T ss_pred ccccCCCEEECCEEECCCCEEEEcCCcEEEEcHHHHHHHHHHHH
Confidence 445667765 677888887 57777777666544
No 240
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=38.38 E-value=49 Score=20.47 Aligned_cols=27 Identities=7% Similarity=-0.011 Sum_probs=15.5
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceE
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNV 66 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~v 66 (230)
.++|++|..+..+ ...+..|...||.|
T Consensus 57 ~~iv~~c~~G~rs-----~~aa~~L~~~G~~v 83 (95)
T cd01534 57 ARIVLADDDGVRA-----DMTASWLAQMGWEV 83 (95)
T ss_pred CeEEEECCCCChH-----HHHHHHHHHcCCEE
Confidence 4677777653322 22344567789984
No 241
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=37.25 E-value=66 Score=22.83 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=22.7
Q ss_pred EEEcCCCCCch-hhHHHHHHhhccCCceEEEEecc
Q psy18021 39 VYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 39 v~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.+..+-||... ..-..++..++++|+.|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 44455555544 34456777888899999999983
No 242
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=36.91 E-value=52 Score=27.22 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=30.3
Q ss_pred hcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCC
Q psy18021 140 ERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWK 189 (230)
Q Consensus 140 ~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 189 (230)
++-...+|+|+|+.|+..-.. ..+.. .+.+..+++.||++|.....
T Consensus 348 r~~~~rmlFVYG~nDPW~A~~--f~l~~--g~~ds~v~~~PggnHga~I~ 393 (448)
T PF05576_consen 348 RNNGPRMLFVYGENDPWSAEP--FRLGK--GKRDSYVFTAPGGNHGARIA 393 (448)
T ss_pred HhCCCeEEEEeCCCCCcccCc--cccCC--CCcceEEEEcCCCccccccc
Confidence 344578999999999875321 11111 12367888889999986543
No 243
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=36.84 E-value=1.2e+02 Score=21.04 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=30.7
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHHhc
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAKAN 205 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 205 (230)
.....+...|+|++ | ......+..+.+.+...+.+++-+-|-.. -..|.......+||..++
T Consensus 83 ~~~a~~~~KP~l~i----~-~~~~~~~~~v~~wl~~~~i~vLNVAGPRe---S~~PgI~~~~~~~L~~~l 144 (145)
T PF12694_consen 83 VEFARKHGKPCLHI----D-LSIPEAAAAVAEWLREHNIRVLNVAGPRE---SKAPGIYRQVRAFLEALL 144 (145)
T ss_dssp HHHHHHTT--EEEE----T-S-HHHHHHHHHHHHHHTT--EEEEE---T---TT-TTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEE----e-cCcccHHHHHHHHHHHCCceEEEeccCcc---cCCCCHHHHHHHHHHHHh
Confidence 34455667888888 1 22234455666666655567777765433 334556666667776654
No 244
>PRK09262 hypothetical protein; Provisional
Probab=35.91 E-value=1.9e+02 Score=21.75 Aligned_cols=95 Identities=16% Similarity=0.194 Sum_probs=55.3
Q ss_pred eEEEEeccCCcCCC--cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhcC
Q psy18021 65 NVLMVEYRGYGKSQ--GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIERV 142 (230)
Q Consensus 65 ~vi~~d~rG~G~s~--Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 142 (230)
.|+.+|..|.-... |+.++..+... .+.++|+.....+..+....-++.......+. .. .......+
T Consensus 79 dVlVid~~g~~~~a~~Ge~~a~~a~~~-----G~~GiVidG~vRD~~~i~~l~~Pvfa~g~~p~----~~--~~~~~~~~ 147 (225)
T PRK09262 79 DVLVVAPTSPCTDGFFGDLLATSLQAR-----GVRGLVIDAGVRDVRTLTEMGFPVWSRAISAQ----GT--VKATLGSV 147 (225)
T ss_pred CEEEEECCCCCceeeehHHHHHHHHHC-----CCeEEEEeceeCCHHHHhhCCCceEEeecCCC----CC--CCCCccee
Confidence 67789977654433 77776655554 58999998887777766543332211111111 00 11223455
Q ss_pred CCCEE----------EEEecCCcc--cChHHHHHHHHHhC
Q psy18021 143 SNPTF----------FIVGLNDHL--VPPSMMVKLHENSG 170 (230)
Q Consensus 143 ~~Pvl----------~i~g~~D~~--v~~~~~~~~~~~~~ 170 (230)
++|+- +|+|+.|-+ +|.+.+.+..+...
T Consensus 148 nvpV~iggv~V~PGD~IvaD~dGVvvIP~~~~~eVl~~a~ 187 (225)
T PRK09262 148 NVPVVCAGALVNPGDVVVADDDGVVVVPRAQAAAVADAAE 187 (225)
T ss_pred cccEEECCEEECCCCEEEEECCcEEEECHHHHHHHHHHHH
Confidence 66665 677888887 57777776665544
No 245
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=35.24 E-value=73 Score=24.33 Aligned_cols=33 Identities=18% Similarity=0.087 Sum_probs=24.7
Q ss_pred CCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 43 GNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 43 G~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
|-||.... .--.++..|+++|++|+.+|+--.|
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~ 40 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKH 40 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCccc
Confidence 77777554 3566777788999999999986554
No 246
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=34.65 E-value=64 Score=21.91 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=10.3
Q ss_pred CcEEEEEcCCCCC
Q psy18021 35 TMTLVYLHGNAGN 47 (230)
Q Consensus 35 ~p~vv~~HG~~~~ 47 (230)
..+|||+||=.++
T Consensus 57 y~~viFvHGCFWh 69 (150)
T COG3727 57 YRCVIFVHGCFWH 69 (150)
T ss_pred ceEEEEEeeeecc
Confidence 5689999997654
No 247
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=34.54 E-value=43 Score=24.90 Aligned_cols=28 Identities=29% Similarity=0.131 Sum_probs=18.9
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++...|-+.+ +..|+++|+.|+++|.
T Consensus 40 rvL~~gCG~G~d--------a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 40 RVLVPLCGKSLD--------MLWLAEQGHEVLGVEL 67 (218)
T ss_pred eEEEeCCCChHh--------HHHHHhCCCeEEEEcc
Confidence 355555555544 3345678999999997
No 248
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=33.95 E-value=43 Score=21.68 Aligned_cols=31 Identities=16% Similarity=0.167 Sum_probs=20.1
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccC-CceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSML-KCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~-g~~vi~~d~ 71 (230)
||++.|.+++..+.. ++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKST~---a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTL---AKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHH---HHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHHH---HHHHHHHHCCeEEEecc
Confidence 578888888865432 3334443 888887774
No 249
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=33.81 E-value=46 Score=24.66 Aligned_cols=28 Identities=25% Similarity=0.152 Sum_probs=19.3
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++.-.|-+.+ +..|+++|+.|+++|.
T Consensus 37 rvLd~GCG~G~d--------a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 37 RVFVPLCGKSLD--------LAWLAEQGHRVLGVEL 64 (213)
T ss_pred eEEEeCCCchhH--------HHHHHhCCCeEEEEeC
Confidence 355555565544 3356788999999996
No 250
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=33.66 E-value=69 Score=20.11 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=17.0
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
.++||+++++..+ ...+..|...||. |..++
T Consensus 66 ~~vv~~c~~g~~s-----~~~a~~L~~~G~~~v~~l~ 97 (105)
T cd01525 66 KIIVIVSHSHKHA-----ALFAAFLVKCGVPRVCILD 97 (105)
T ss_pred CeEEEEeCCCccH-----HHHHHHHHHcCCCCEEEEe
Confidence 5677777654322 2233456677885 54443
No 251
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=33.66 E-value=82 Score=23.53 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=27.5
Q ss_pred EEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCc
Q psy18021 37 TLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 37 ~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
+|.+..+-||... .....++..++++|++|+.+|.-..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 5666665666543 34556777788899999999996544
No 252
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=33.07 E-value=2.5e+02 Score=22.37 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=57.8
Q ss_pred CcEEEEEcC-CCCCc----hhhHHHHHHhhccCCceEEEEeccCCcCCCcHHHHHHHHhCCCCccccceEEEecCCCCHH
Q psy18021 35 TMTLVYLHG-NAGNI----GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIP 109 (230)
Q Consensus 35 ~p~vv~~HG-~~~~~----~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~ 109 (230)
+|.|++.|| ..+.. ...+..+++.+.++|+.|+.+=.. .=...+-.++... +.. +..++-.++.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-----~e~e~~~~i~~~~--~~~----~~l~~k~sL~ 243 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-----DEEERAEEIAKGL--PNA----VILAGKTSLE 243 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-----HHHHHHHHHHHhc--CCc----cccCCCCCHH
Confidence 368999999 44232 235556666777888888765321 1122222333333 111 1166777777
Q ss_pred HHHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCccc
Q psy18021 110 DMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLV 157 (230)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~v 157 (230)
+........ .+...+.-....-...+.+|++.++|..+...
T Consensus 244 e~~~li~~a-------~l~I~~DSg~~HlAaA~~~P~I~iyg~t~~~~ 284 (334)
T COG0859 244 ELAALIAGA-------DLVIGNDSGPMHLAAALGTPTIALYGPTSPAF 284 (334)
T ss_pred HHHHHHhcC-------CEEEccCChHHHHHHHcCCCEEEEECCCCccc
Confidence 776655322 12222222334444566889999999887653
No 253
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=32.52 E-value=87 Score=23.86 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=23.5
Q ss_pred EEEEcCCCCCchhhHHHH--HHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNV--AGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~--~~~~~~~g~~vi~~d~r 72 (230)
.|.+.|-+++........ ..++.+.||.|+++|--
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaD 38 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDAD 38 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 466778888765544433 44455556999999963
No 254
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=32.28 E-value=1e+02 Score=22.51 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=25.7
Q ss_pred CCCCCchh-hHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 43 GNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 43 G~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
|-++.... .-..++..|++.|++|+.+|.--.+.
T Consensus 7 gKGGvGKTt~~~nLA~~la~~G~rvLliD~D~q~~ 41 (212)
T cd02117 7 GKGGIGKSTTSQNLSAALAEMGKKVLQVGCDPKAD 41 (212)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 66666544 46677888899999999999876553
No 255
>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family.; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....
Probab=32.15 E-value=1e+02 Score=19.32 Aligned_cols=12 Identities=25% Similarity=0.365 Sum_probs=6.8
Q ss_pred hccCCc-eEEEEe
Q psy18021 59 HSMLKC-NVLMVE 70 (230)
Q Consensus 59 ~~~~g~-~vi~~d 70 (230)
+...|+ .|..++
T Consensus 92 l~~~g~~~v~~l~ 104 (113)
T PF00581_consen 92 LKKLGFKNVYILD 104 (113)
T ss_dssp HHHTTTSSEEEET
T ss_pred HHHcCCCCEEEec
Confidence 455576 565554
No 256
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=31.76 E-value=77 Score=24.19 Aligned_cols=33 Identities=15% Similarity=0.012 Sum_probs=25.0
Q ss_pred CCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 43 GNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 43 G~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
|-||.... ....++..|+++|++|+.+|.--.|
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~ 40 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKH 40 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 77776544 4567777889999999999986444
No 257
>KOG3724|consensus
Probab=30.58 E-value=1.1e+02 Score=27.81 Aligned_cols=38 Identities=13% Similarity=0.330 Sum_probs=23.7
Q ss_pred cEEEEEcCCCCCchhhHHHHHHhh---------------ccCCceEEEEeccC
Q psy18021 36 MTLVYLHGNAGNIGHRLHNVAGLH---------------SMLKCNVLMVEYRG 73 (230)
Q Consensus 36 p~vv~~HG~~~~~~~~~~~~~~~~---------------~~~g~~vi~~d~rG 73 (230)
=+|+|++|..|+........+... ....++.++.|+-+
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE 142 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE 142 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc
Confidence 369999999999654444333221 22346777777653
No 258
>PRK00889 adenylylsulfate kinase; Provisional
Probab=30.31 E-value=1.2e+02 Score=21.34 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~ 71 (230)
++.+|.+.|.+++... ....++..+...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4468888899998754 445566666666777777754
No 259
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=30.20 E-value=1.5e+02 Score=18.99 Aligned_cols=60 Identities=10% Similarity=0.028 Sum_probs=32.9
Q ss_pred CCceeEEEEccCCCEEEEEEecCCCcccCCCCcEEEEEcCCCCCc--hhhH---HHHHHhhccCCceEEEEec
Q psy18021 4 LPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNI--GHRL---HNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 4 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~--~~~~---~~~~~~~~~~g~~vi~~d~ 71 (230)
-+..++.+++.+|..+..--+ .+ +++||++-...++. .... ..+...+.+.|+.++.+..
T Consensus 3 ~~~P~f~l~~~~g~~~~l~~l--~g------k~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 3 DKAPDFTLTDSDGKTVSLSDL--KG------KPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp SBGGCEEEETTTSEEEEGGGG--TT------SEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCCCcEeECCCCCEEEHHHH--CC------CcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 345567888888766542111 11 56777775553432 1122 2223334666888888875
No 260
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=30.17 E-value=1.1e+02 Score=23.38 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=26.7
Q ss_pred cCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 42 HGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 42 HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
-|-||.... ....++..|++.|+.|+.+|.--.|..
T Consensus 6 ~gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~~~ 42 (275)
T TIGR01287 6 YGKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKADS 42 (275)
T ss_pred eCCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 377777644 456778788999999999999655443
No 261
>PRK13236 nitrogenase reductase; Reviewed
Probab=30.08 E-value=1.1e+02 Score=23.98 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=29.6
Q ss_pred EEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 38 LVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 38 vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
||-+.|-||.... ..-.++..|+++|++|+.+|.--++.+.
T Consensus 8 ~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~D~q~~~~ 49 (296)
T PRK13236 8 QIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGCDPKADST 49 (296)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCcc
Confidence 4444887777654 3556677789999999999996665544
No 262
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=29.85 E-value=98 Score=21.58 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=22.8
Q ss_pred EEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
|.+..+-++.. ...-..++..++++|+.|+.+|.-
T Consensus 2 i~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444444443 334556677788899999999874
No 263
>PRK01415 hypothetical protein; Validated
Probab=29.71 E-value=79 Score=24.15 Aligned_cols=39 Identities=13% Similarity=0.139 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEeccCCcCCCcHHHHHHH
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVEYRGYGKSQGGAVAIDL 86 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d~rG~G~s~Gg~~a~~~ 86 (230)
++++++|.|+.-+ ...+..|.+.||. |+.++ ||..+..-
T Consensus 172 k~Iv~yCtgGiRs-----~kAa~~L~~~Gf~~Vy~L~--------GGi~~w~~ 211 (247)
T PRK01415 172 KKIAMVCTGGIRC-----EKSTSLLKSIGYDEVYHLK--------GGILQYLE 211 (247)
T ss_pred CeEEEECCCChHH-----HHHHHHHHHcCCCcEEEec--------hHHHHHHH
Confidence 6788888775433 3445567788995 76665 77766653
No 264
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=29.60 E-value=1.3e+02 Score=22.89 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=28.7
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
+|.++ |-||.... .-..++..|+++|+.|+.+|.--.|.+
T Consensus 3 ~iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n~ 43 (270)
T cd02040 3 QIAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADS 43 (270)
T ss_pred EEEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCc
Confidence 45555 67776544 456777788899999999999665533
No 265
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=29.43 E-value=1e+02 Score=23.56 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=22.9
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
.|+++.|-+.+..+ --.++++|..+||.|..+-
T Consensus 62 ~V~VlcG~GNNGGD-Glv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGD-GLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchh-HHHHHHHHHHCCCeEEEEE
Confidence 47777787777444 3445567778899887665
No 266
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=29.29 E-value=95 Score=22.74 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCCc--hhhHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 35 TMTLVYLHGNAGNI--GHRLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 35 ~p~vv~~HG~~~~~--~~~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
...|+++||-.... ..+.....+.|.+.|..+-.-.|+|-|.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Confidence 34699999998875 33556667778888887777777755544
No 267
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=29.18 E-value=1.2e+02 Score=20.75 Aligned_cols=41 Identities=10% Similarity=0.069 Sum_probs=27.0
Q ss_pred EEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 38 LVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 38 vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
+|.+-|..++.. .....+...|.++||.+.++=.-+||+..
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 677778777754 35556666788889999877667776665
No 268
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=28.90 E-value=46 Score=25.01 Aligned_cols=14 Identities=14% Similarity=0.131 Sum_probs=12.3
Q ss_pred hhccCCceEEEEec
Q psy18021 58 LHSMLKCNVLMVEY 71 (230)
Q Consensus 58 ~~~~~g~~vi~~d~ 71 (230)
.|+++||.|+.+|+
T Consensus 60 ~LA~~G~~V~GvDl 73 (226)
T PRK13256 60 FFLSKGVKVIGIEL 73 (226)
T ss_pred HHHhCCCcEEEEec
Confidence 56788999999997
No 269
>KOG1470|consensus
Probab=28.87 E-value=3.1e+02 Score=22.04 Aligned_cols=42 Identities=12% Similarity=0.018 Sum_probs=29.1
Q ss_pred ceEEEEeccCCcCCC----cHHHHHH-HHhCCCCccccceEEEecCCCC
Q psy18021 64 CNVLMVEYRGYGKSQ----GGAVAID-LLARPEYASKIWCLIVENTFTS 107 (230)
Q Consensus 64 ~~vi~~d~rG~G~s~----Gg~~a~~-~a~~~~~~~~i~~~i~~~~~~~ 107 (230)
-.++.+|+.|++.|. .+-..+. +-..+ |.++..++++.+..-
T Consensus 151 ~~~~L~D~~~fs~sN~d~~~~k~~~~~lq~hY--PErLg~a~l~~~P~i 197 (324)
T KOG1470|consen 151 QFVWLFDLTGFSMSNPDIKFLKELLHILQDHY--PERLGKALLVNAPWI 197 (324)
T ss_pred eEEEEEecccCcccCCCcHHHHHHHHHHHHhC--hHHhhhhhhcCChHH
Confidence 368999999999887 3333333 33444 999998888877433
No 270
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.72 E-value=60 Score=21.56 Aligned_cols=22 Identities=18% Similarity=0.092 Sum_probs=18.4
Q ss_pred hHHHHHHhhccCCceEEEEecc
Q psy18021 51 RLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 51 ~~~~~~~~~~~~g~~vi~~d~r 72 (230)
++...++.|+++|+.+++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 5566778899999999999974
No 271
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=27.50 E-value=83 Score=20.62 Aligned_cols=31 Identities=10% Similarity=-0.084 Sum_probs=18.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc--eEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC--NVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~--~vi~~d 70 (230)
+++|++|.++..+ ...+..|.+.|| .|..++
T Consensus 73 ~~ivv~C~~G~rs-----~~aa~~L~~~G~~~~v~~l~ 105 (122)
T cd01526 73 SPIYVVCRRGNDS-----QTAVRKLKELGLERFVRDII 105 (122)
T ss_pred CcEEEECCCCCcH-----HHHHHHHHHcCCccceeeec
Confidence 5677777654322 234456778899 466665
No 272
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=27.37 E-value=1.1e+02 Score=21.42 Aligned_cols=38 Identities=21% Similarity=0.202 Sum_probs=25.1
Q ss_pred EEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 38 LVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 38 vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
|.+..+-+|.... ....++..+++.|++|+.+|.--.+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~q~ 40 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYG 40 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 4445555555433 4556777788889999999875444
No 273
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=27.23 E-value=1.5e+02 Score=22.63 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=27.6
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
+|.+. |-||.... ....++..|+++|+.|+.+|.--.|.
T Consensus 4 iIav~-~KGGVGKTT~~~nLA~~la~~G~kVLliD~Dpq~~ 43 (270)
T PRK13185 4 VLAVY-GKGGIGKSTTSSNLSAAFAKLGKKVLQIGCDPKHD 43 (270)
T ss_pred EEEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEeccCCcc
Confidence 34444 66666544 46677778899999999999875543
No 274
>PHA02518 ParA-like protein; Provisional
Probab=26.86 E-value=1.8e+02 Score=20.91 Aligned_cols=40 Identities=20% Similarity=0.188 Sum_probs=26.9
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
+|.+...-||.... .-..++..|+++|+.|+.+|.--.+.
T Consensus 2 ii~v~~~KGGvGKTT~a~~la~~la~~g~~vlliD~D~q~~ 42 (211)
T PHA02518 2 IIAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLDPQGS 42 (211)
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 45555555555433 34556667888999999999965543
No 275
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=26.79 E-value=1.3e+02 Score=23.60 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=26.0
Q ss_pred EEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCCc
Q psy18021 38 LVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 38 vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
|.++ |-|+... .....++..|+++|++|+.+|.--.+
T Consensus 3 Iav~-gKGGvGKTT~a~nLA~~La~~g~rVLlID~Dpq~ 40 (296)
T TIGR02016 3 IAIY-GKGGSGKSFTTTNLSHMMAEMGKRVLQLGCDPKH 40 (296)
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEEecCCC
Confidence 4444 7776654 35566777788899999999985433
No 276
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=26.79 E-value=1.1e+02 Score=19.15 Aligned_cols=31 Identities=16% Similarity=0.061 Sum_probs=15.8
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
+++||+++++..+ ...+..|.+.||. |..++
T Consensus 59 ~~vv~~c~~g~rs-----~~~~~~l~~~G~~~v~~l~ 90 (101)
T cd01528 59 KDIVVLCHHGGRS-----MQVAQWLLRQGFENVYNLQ 90 (101)
T ss_pred CeEEEEeCCCchH-----HHHHHHHHHcCCccEEEec
Confidence 5677777663222 2223344556774 55444
No 277
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.38 E-value=1.2e+02 Score=25.88 Aligned_cols=40 Identities=5% Similarity=-0.047 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCC
Q psy18021 35 TMTLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
.|+||++.|+-++.. .....+...+..+|+.|.++..|..
T Consensus 39 ~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~ 79 (493)
T TIGR03708 39 FPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD 79 (493)
T ss_pred CeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH
Confidence 789999999988863 4555666678889999999887643
No 278
>CHL00175 minD septum-site determining protein; Validated
Probab=26.29 E-value=1.4e+02 Score=22.98 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=28.2
Q ss_pred cEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccC
Q psy18021 36 MTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRG 73 (230)
Q Consensus 36 p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG 73 (230)
.+|.++.|-||.... .-..++..+++.|+.|+.+|.--
T Consensus 16 ~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D~ 54 (281)
T CHL00175 16 RIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADI 54 (281)
T ss_pred eEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 467777777777544 45667777888999999999843
No 279
>PRK06696 uridine kinase; Validated
Probab=26.27 E-value=1.5e+02 Score=21.90 Aligned_cols=37 Identities=11% Similarity=-0.088 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.|.||.+-|.+++..+ ....+++.|...|..++.+-+
T Consensus 21 ~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~~ 58 (223)
T PRK06696 21 RPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRASI 58 (223)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEecc
Confidence 6789999999998754 445566666666777776443
No 280
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=26.22 E-value=1.2e+02 Score=26.74 Aligned_cols=42 Identities=14% Similarity=0.194 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 35 TMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
+.++|++||.....- .....+.+.|.+.|..|-..-+++-|.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H 594 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGH 594 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCc
Confidence 457999999987742 234445556777898887777765443
No 281
>PRK03846 adenylylsulfate kinase; Provisional
Probab=26.11 E-value=1.5e+02 Score=21.50 Aligned_cols=36 Identities=8% Similarity=0.134 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d 70 (230)
+|.+|.+.|..++..+ ....+...+...|+.++.+|
T Consensus 23 ~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 23 KGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 5678888898888654 34445555555677777776
No 282
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=25.95 E-value=1.1e+02 Score=21.84 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEE
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMV 69 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~ 69 (230)
-|.++||..-........+..+..+.++.|+.+
T Consensus 83 ki~l~HGh~~~~~~~~~~l~~la~~~~~Dvli~ 115 (172)
T COG0622 83 KIFLTHGHLYFVKTDLSLLEYLAKELGADVLIF 115 (172)
T ss_pred EEEEECCCccccccCHHHHHHHHHhcCCCEEEE
Confidence 588899966543333444444445567777765
No 283
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.76 E-value=1.4e+02 Score=17.78 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=19.6
Q ss_pred EcCCCCCc-hhhHHHHHHhhccCCceEEEEe
Q psy18021 41 LHGNAGNI-GHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 41 ~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d 70 (230)
+-|.++.. ......++..+++.|+.++.+|
T Consensus 4 ~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 4 VTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 33444443 3455666777788899998888
No 284
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=25.65 E-value=1.4e+02 Score=25.36 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=19.4
Q ss_pred EEEEEecCCCcccCCCCcEEEEEcCCCCCch
Q psy18021 19 IHLYFIPQPDVKAKCETMTLVYLHGNAGNIG 49 (230)
Q Consensus 19 l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~ 49 (230)
...|.+.+.+.+.+ +|+|+++.|++++..
T Consensus 87 ~ffy~fe~~ndp~~--rPvi~wlNGGPGcSS 115 (498)
T COG2939 87 FFFYTFESPNDPAN--RPVIFWLNGGPGCSS 115 (498)
T ss_pred EEEEEecCCCCCCC--CceEEEecCCCChHh
Confidence 44455555333222 899999999999843
No 285
>PRK09072 short chain dehydrogenase; Provisional
Probab=25.59 E-value=1.1e+02 Score=22.95 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=21.8
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.+++.|+.+.. -..++..+.++|+.|+..+.+
T Consensus 7 ~vlItG~s~~i---G~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGGI---GQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCchH---HHHHHHHHHHCCCEEEEEECC
Confidence 56777777652 344455567789999998853
No 286
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=25.35 E-value=56 Score=20.55 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=17.4
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
.++|++|.++.. ....+..|...||. |..++
T Consensus 67 ~~ivv~c~~g~~-----s~~~~~~l~~~G~~~v~~~~ 98 (106)
T cd01519 67 KELIFYCKAGVR-----SKAAAELARSLGYENVGNYP 98 (106)
T ss_pred CeEEEECCCcHH-----HHHHHHHHHHcCCccceecC
Confidence 567777665321 23344556777884 55444
No 287
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=25.32 E-value=1.5e+02 Score=24.36 Aligned_cols=41 Identities=17% Similarity=0.038 Sum_probs=27.7
Q ss_pred cEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec-cCCcC
Q psy18021 36 MTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY-RGYGK 76 (230)
Q Consensus 36 p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~-rG~G~ 76 (230)
.+|.+...-||.... .-..++..|+.+|+.|+++|. -..|.
T Consensus 107 ~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~n 149 (388)
T PRK13705 107 PVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGT 149 (388)
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCCc
Confidence 455555655565443 456677778899999999995 55543
No 288
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=25.06 E-value=1.5e+02 Score=22.12 Aligned_cols=38 Identities=16% Similarity=0.066 Sum_probs=25.4
Q ss_pred EEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccCC
Q psy18021 37 TLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 37 ~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
+|.++-+-||... .....++..++++|+.|+.+|+--.
T Consensus 2 ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 40 (251)
T TIGR01969 2 IITIASGKGGTGKTTITANLGVALAKLGKKVLALDADIT 40 (251)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4555555555543 3445577778889999999998543
No 289
>cd07561 Peptidase_S41_CPP_like C-terminal processing peptidase-like; serine protease family S41. Bacterial protease homologs of the S41 family related to C-terminal processing peptidase (CPP). CPP-1 is believed to be important for the degradation of incorrectly synthesized proteins as well as protection from thermal and osmotic stresses. CPP is synthesized with an extension on its carboxyl-terminus and specifically recognizes a C-terminal tripeptide, but cleaves at variable distance from the C-terminus. The CPP active site consists of a serine/lysine catalytic dyad. Conservation of these residues is seen in the CPP-like proteins of this group. CPP proteins contain a PDZ domain that promotes protein-protein interactions and is important for substrate recognition however, most of CPP-like proteins only have an internal fragment or lack the PDZ domain.
Probab=25.05 E-value=1.5e+02 Score=22.67 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
..|.++.+..............+.+.|..-+.+|+|+.|.
T Consensus 67 GYi~i~~F~~~~~~~l~~a~~~l~~~~~~~LIlDLR~N~G 106 (256)
T cd07561 67 GYLVYNSFTSGYDDELNQAFAEFKAQGVTELVLDLRYNGG 106 (256)
T ss_pred EEEEECccccchHHHHHHHHHHHHHcCCCeEEEEeCCCCC
Confidence 4677777776544444444445677799999999999763
No 290
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=24.85 E-value=1.9e+02 Score=20.94 Aligned_cols=37 Identities=14% Similarity=0.070 Sum_probs=25.4
Q ss_pred EEEEEcCCCCCch-hhHHHHHHhhccCCceEEEEeccC
Q psy18021 37 TLVYLHGNAGNIG-HRLHNVAGLHSMLKCNVLMVEYRG 73 (230)
Q Consensus 37 ~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~d~rG 73 (230)
+|.+..+-++... ..-..++..+++.|++|+.+|.--
T Consensus 19 vI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~ 56 (204)
T TIGR01007 19 VLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDM 56 (204)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5555555555543 345667777889999999999743
No 291
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=24.73 E-value=2e+02 Score=23.05 Aligned_cols=28 Identities=21% Similarity=0.146 Sum_probs=20.0
Q ss_pred hhhHHHHHHhhccCCceEEEEeccCCcCC
Q psy18021 49 GHRLHNVAGLHSMLKCNVLMVEYRGYGKS 77 (230)
Q Consensus 49 ~~~~~~~~~~~~~~g~~vi~~d~rG~G~s 77 (230)
-.....+++.+.++|+.+..+ -||||..
T Consensus 65 TP~v~~L~~~l~~~g~~~~il-sRGYg~~ 92 (325)
T PRK00652 65 TPVVIALAEQLQARGLKPGVV-SRGYGGK 92 (325)
T ss_pred HHHHHHHHHHHHHCCCeEEEE-CCCCCCC
Confidence 345667777888889887655 4888764
No 292
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=24.60 E-value=1.4e+02 Score=22.34 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=48.6
Q ss_pred CcEEEEEcCCCCCch----hhHHHHHHhhccCCceEEEEeccCCcCCCcHHHHHHHHhCCCCccccceEEEecCCCCHHH
Q psy18021 35 TMTLVYLHGNAGNIG----HRLHNVAGLHSMLKCNVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPD 110 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~----~~~~~~~~~~~~~g~~vi~~d~rG~G~s~Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~ 110 (230)
++.|++.+|...... ..+..+.+.+.++++.|+.+--+ .......+-.++... +.. .+...+..++.+
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~---~~~~~~~~~~~~~~~--~~~---~~~~~~~~~l~e 176 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGP---EEQEKEIADQIAAGL--QNP---VINLAGKTSLRE 176 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SS---HHHHHHHHHHHHTTH--TTT---TEEETTTS-HHH
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccc---hHHHHHHHHHHHHhc--ccc---eEeecCCCCHHH
Confidence 578888888876432 24455666778888777654321 110112222233322 111 344555567776
Q ss_pred HHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCC
Q psy18021 111 MALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLND 154 (230)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 154 (230)
......... .+....-....-...+.+|++.+.|..+
T Consensus 177 ~~ali~~a~-------~~I~~Dtg~~HlA~a~~~p~v~lfg~t~ 213 (247)
T PF01075_consen 177 LAALISRAD-------LVIGNDTGPMHLAAALGTPTVALFGPTN 213 (247)
T ss_dssp HHHHHHTSS-------EEEEESSHHHHHHHHTT--EEEEESSS-
T ss_pred HHHHHhcCC-------EEEecCChHHHHHHHHhCCEEEEecCCC
Confidence 655544321 2222222234444567899999998875
No 293
>PRK12828 short chain dehydrogenase; Provisional
Probab=24.52 E-value=1.2e+02 Score=22.21 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=21.5
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++.|..+... ..+++.|.++|+.|+..+.
T Consensus 9 ~vlItGatg~iG---~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG---RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh---HHHHHHHHHCCCeEEEEeC
Confidence 477788776633 4445556777999999885
No 294
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=24.36 E-value=1.5e+02 Score=18.08 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=17.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EE
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VL 67 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi 67 (230)
.|+||+++++.... ....+..|.+.||. |.
T Consensus 51 ~~ivl~c~~G~~~~---s~~aa~~L~~~G~~~v~ 81 (92)
T cd01532 51 TPIVVYGEGGGEDL---APRAARRLSELGYTDVA 81 (92)
T ss_pred CeEEEEeCCCCchH---HHHHHHHHHHcCccCEE
Confidence 67888887654331 22334456677874 44
No 295
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=24.01 E-value=1.6e+02 Score=20.85 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d 70 (230)
.+.+|.+.|..++... ....+...+...|+.++.+|
T Consensus 17 ~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~ 53 (184)
T TIGR00455 17 RGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLD 53 (184)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEC
Confidence 5679999998888654 34555555556677766665
No 296
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=23.83 E-value=1.9e+02 Score=23.49 Aligned_cols=62 Identities=13% Similarity=0.269 Sum_probs=32.4
Q ss_pred HHhhhcCCCCEEEEEecCCcccChHHHHH-----------------HHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHH
Q psy18021 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVK-----------------LHENSGGILKQIVLFESGSHNDTWKCSGYYHTIS 198 (230)
Q Consensus 136 ~~~~~~i~~Pvl~i~g~~D~~v~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~ 198 (230)
...++.+++|++++|-.-++-+|++.... +..++. .+..++- || ++.+++++.|.
T Consensus 90 I~gl~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~g---i~~kvV~--G~---w~D~~v~~~I~ 161 (359)
T PF02610_consen 90 IPGLQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMG---IPRKVVV--GH---WQDEEVWAEIG 161 (359)
T ss_dssp HHHHHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT-----EEEEE--S----TT-HHHHHHHH
T ss_pred HHHHHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhC---CCcCeEe--ee---CCCHHHHHHHH
Confidence 34567788999999998888888654432 111222 3445553 57 55778999999
Q ss_pred HHHHHhc
Q psy18021 199 QFLAKAN 205 (230)
Q Consensus 199 ~fl~~~~ 205 (230)
+|+....
T Consensus 162 ~W~rAA~ 168 (359)
T PF02610_consen 162 DWMRAAA 168 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 297
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=23.82 E-value=1.1e+02 Score=18.64 Aligned_cols=31 Identities=13% Similarity=-0.029 Sum_probs=16.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
+++|+++..+.. ....+..|.+.|+.+..++
T Consensus 52 ~~vvl~c~~g~~-----a~~~a~~L~~~G~~v~~l~ 82 (90)
T cd01524 52 KEIIVYCAVGLR-----GYIAARILTQNGFKVKNLD 82 (90)
T ss_pred CcEEEEcCCChh-----HHHHHHHHHHCCCCEEEec
Confidence 567777654211 2223445677788665554
No 298
>KOG0407|consensus
Probab=23.67 E-value=2.2e+02 Score=18.55 Aligned_cols=56 Identities=25% Similarity=0.302 Sum_probs=38.6
Q ss_pred CcEEEEEcCCCCCch------hhH-----HHHHHhhccCCceEEEEeccCCcCCC------cHHHHHHHHhCC
Q psy18021 35 TMTLVYLHGNAGNIG------HRL-----HNVAGLHSMLKCNVLMVEYRGYGKSQ------GGAVAIDLLARP 90 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~------~~~-----~~~~~~~~~~g~~vi~~d~rG~G~s~------Gg~~a~~~a~~~ 90 (230)
+-+|+-+-|+.-... .+. ...+....+.|..++-+-+|+.|... |+..|+...++.
T Consensus 38 ~eti~rvtggmkvkadrdesspyaamlaaqdva~kck~~gi~alh~klratgg~ktktpgpgaqsalralar~ 110 (139)
T KOG0407|consen 38 KETIVRVTGGMKVKADRDESSPYAAMLAAQDVAAKCKELGITALHIKLRATGGTKTKTPGPGAQSALRALARS 110 (139)
T ss_pred ceEEEEecCCeEEecccccCChHHHHHHHHHHHHHHHhcCeeEEEEEEEecCCcccCCCCccHHHHHHHHHHh
Confidence 447888888763221 111 12333345779999999999999876 899999877765
No 299
>PRK11460 putative hydrolase; Provisional
Probab=23.62 E-value=1.8e+02 Score=21.66 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEeccCCc
Q psy18021 35 TMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
.+.|+++||-....- .......+.+.+.|..+-...++|.|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 456889999887742 23445555666777766555555433
No 300
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=23.59 E-value=1.5e+02 Score=18.06 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=16.6
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEE
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLM 68 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~ 68 (230)
.|+||++.++..+ ...+..|.+.||. |..
T Consensus 57 ~~ivv~c~~g~~s-----~~a~~~l~~~G~~~v~~ 86 (96)
T cd01444 57 RPVVVYCYHGNSS-----AQLAQALREAGFTDVRS 86 (96)
T ss_pred CCEEEEeCCCChH-----HHHHHHHHHcCCceEEE
Confidence 6788888743332 2334456677884 543
No 301
>PRK08177 short chain dehydrogenase; Provisional
Probab=23.49 E-value=1.4e+02 Score=21.78 Aligned_cols=33 Identities=6% Similarity=-0.114 Sum_probs=21.7
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccC
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRG 73 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG 73 (230)
.+++.|..+.. -..+++.|.+.|+.|++.+.+.
T Consensus 3 ~vlItG~sg~i---G~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 3 TALIIGASRGL---GLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred EEEEeCCCchH---HHHHHHHHHhCCCEEEEEeCCC
Confidence 45566666552 2344566777899999988654
No 302
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=23.44 E-value=1.4e+02 Score=22.81 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=26.4
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
-|+++-|.++. .-...++.|.+.|+.|+....|
T Consensus 7 kv~lITGASSG---iG~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 7 KVALITGASSG---IGEATARALAEAGAKVVLAARR 39 (246)
T ss_pred cEEEEecCcch---HHHHHHHHHHHCCCeEEEEecc
Confidence 38888887776 4466677889999999998876
No 303
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=23.19 E-value=90 Score=19.38 Aligned_cols=31 Identities=10% Similarity=-0.033 Sum_probs=16.7
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
.++||++.++ ... ...+..|...||. |..+|
T Consensus 62 ~~ivv~c~~g--~~s---~~~~~~l~~~G~~~v~~l~ 93 (103)
T cd01447 62 KPFVFYCASG--WRS---ALAGKTLQDMGLKPVYNIE 93 (103)
T ss_pred CeEEEEcCCC--CcH---HHHHHHHHHcChHHhEeec
Confidence 5677776442 211 2233456667876 66554
No 304
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=23.07 E-value=2e+02 Score=23.65 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=26.7
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec-cCCcC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY-RGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~-rG~G~ 76 (230)
+|.+.-.-||.... .-..++..|+.+|++|+++|+ -..|.
T Consensus 108 vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~n 149 (387)
T PHA02519 108 VLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGT 149 (387)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCC
Confidence 44455555555433 455667778899999999995 65543
No 305
>PRK08245 hypothetical protein; Validated
Probab=23.07 E-value=3.4e+02 Score=20.59 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=55.9
Q ss_pred ceEEEEeccCCcCCC--cHHHHHHHHhCCCCccccceEEEecCCCCHHHHHHHhhhhhhcccccccccccCcccHHhhhc
Q psy18021 64 CNVLMVEYRGYGKSQ--GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSHWKIER 141 (230)
Q Consensus 64 ~~vi~~d~rG~G~s~--Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
=.|+.+|..|.-... |+.++..+... .+.++|+.....+..+....-++.......+. ..........
T Consensus 88 GdVlVid~~g~~~~a~~G~~~~~~a~~~-----G~~G~VidG~vRD~~ei~~~gfPvfarg~~p~-----~~~~~~~~~~ 157 (240)
T PRK08245 88 GCVLVVDARGDARAGSFGDILCTRLKKR-----GVAGLVTDGGVRDSPGIAALGLPVWCAGPSAP-----TNLTGLTAVD 157 (240)
T ss_pred CeEEEEECCCCCCccccHHHHHHHHHHC-----CCeEEEEeeccCCHHHHhhCCCceEecccCCC-----CCCCCCceEe
Confidence 478889987754333 77666654443 68999988887777666543332111111110 0001122345
Q ss_pred CCCCEE----------EEEecCCcc--cChHHHHHHHHHhC
Q psy18021 142 VSNPTF----------FIVGLNDHL--VPPSMMVKLHENSG 170 (230)
Q Consensus 142 i~~Pvl----------~i~g~~D~~--v~~~~~~~~~~~~~ 170 (230)
+++|+- +|+|+.|-+ +|.+.+++..+...
T Consensus 158 ~nvPV~igGv~V~PGD~I~aD~dGVvvIP~~~a~~Vl~~a~ 198 (240)
T PRK08245 158 INVPIGCGGVAVFPGDIIVADDDGVVVIPAALADEVAAEAV 198 (240)
T ss_pred ecCCEEECCEEEcCCCEEEEcCCceEEEcHHHHHHHHHHHH
Confidence 556654 578889987 58787777765444
No 306
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=22.71 E-value=1.6e+02 Score=18.15 Aligned_cols=31 Identities=6% Similarity=0.084 Sum_probs=16.0
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc-eEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC-NVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~-~vi~~d 70 (230)
+++|++|.++..+ ...+..|.+.|| .+..++
T Consensus 55 ~~iv~~c~~g~~s-----~~~~~~L~~~g~~~v~~l~ 86 (99)
T cd01527 55 NAIIFHCRSGMRT-----QQNAERLAAISAGEAYVLE 86 (99)
T ss_pred CcEEEEeCCCchH-----HHHHHHHHHcCCccEEEee
Confidence 5666766553222 233445666677 454443
No 307
>PRK10037 cell division protein; Provisional
Probab=22.70 E-value=1.7e+02 Score=22.12 Aligned_cols=39 Identities=21% Similarity=-0.005 Sum_probs=27.1
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
+|-+...-||.... ....++..|+++|+.|+.+|.--.+
T Consensus 3 ~iav~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~D~q~ 42 (250)
T PRK10037 3 ILGLQGVRGGVGTTSITAALAWSLQMLGENVLVIDACPDN 42 (250)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 45555555555443 3566777789999999999986554
No 308
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=22.62 E-value=3.8e+02 Score=21.03 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=53.3
Q ss_pred CcEEEEEcCCCCCch----hhHHHHHHhhccCCceEEEEeccCCcCCCcHHHHHHHHhCCCCccccceEEEecCCCCHHH
Q psy18021 35 TMTLVYLHGNAGNIG----HRLHNVAGLHSMLKCNVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPD 110 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~----~~~~~~~~~~~~~g~~vi~~d~rG~G~s~Gg~~a~~~a~~~~~~~~i~~~i~~~~~~~~~~ 110 (230)
.+.|+++||...... ..+..+.+.+.+.|+.++..- | +..+ ...+-.++... + . +...+..++.+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~--G-~~~e-~~~~~~i~~~~--~----~-~~l~g~~sL~e 246 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPW--G-AEHE-EQRAKRLAEGF--P----Y-VEVLPKLSLEQ 246 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeC--C-CHHH-HHHHHHHHccC--C----c-ceecCCCCHHH
Confidence 457778898765322 233445555666788876431 1 1111 11122222222 1 1 23345566666
Q ss_pred HHHHhhhhhhcccccccccccCcccHHhhhcCCCCEEEEEecCCcc
Q psy18021 111 MALILLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHL 156 (230)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~ 156 (230)
........ ..+..+.-.+..-...+.+|++.++|..|..
T Consensus 247 laali~~a-------~l~I~nDSGp~HlA~A~g~p~valfGpt~p~ 285 (322)
T PRK10964 247 VARVLAGA-------KAVVSVDTGLSHLTAALDRPNITLYGPTDPG 285 (322)
T ss_pred HHHHHHhC-------CEEEecCCcHHHHHHHhCCCEEEEECCCCcc
Confidence 65554432 1223333334555566789999999977653
No 309
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=22.62 E-value=2.5e+02 Score=18.91 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=24.9
Q ss_pred CCceeEEEEc-cCCCEEEEEEecCCCcccCCCCcEEEEEcCCC
Q psy18021 4 LPYESIFVKS-LDGTKIHLYFIPQPDVKAKCETMTLVYLHGNA 45 (230)
Q Consensus 4 ~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~ 45 (230)
+++|.+.+-. .+|.++..|.++....+ -+|++.|..
T Consensus 39 ~p~E~V~V~Nv~NG~Rf~TYvI~G~~GS------g~I~lNGAA 75 (126)
T TIGR00223 39 LENEKVDIVNVNNGKRFSTYAIAGKRGS------RIICVNGAA 75 (126)
T ss_pred CCCCEEEEEECCCCcEEEEEEEEcCCCC------CEEEeCCHH
Confidence 4577777654 46899999888876533 377777744
No 310
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=22.40 E-value=1.3e+02 Score=22.16 Aligned_cols=31 Identities=19% Similarity=0.100 Sum_probs=21.7
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++.|.++... ..+++.|.++|+.|+..+.
T Consensus 7 ~vlItGa~g~iG---~~~a~~l~~~G~~V~~~~r 37 (238)
T PRK05786 7 KVAIIGVSEGLG---YAVAYFALKEGAQVCINSR 37 (238)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 567888776533 4445567778999998875
No 311
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=22.10 E-value=1.2e+02 Score=22.57 Aligned_cols=37 Identities=16% Similarity=0.085 Sum_probs=23.4
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcCCCcHHHHHHHH
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQGGAVAIDLL 87 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~Gg~~a~~~a 87 (230)
.=|++.|=|.+.. ...|+++||.|+.+|+ ..+|+..+
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDl--------s~~Ai~~~ 75 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDL--------SPTAIEQA 75 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES---------HHHHHHH
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEec--------CHHHHHHH
Confidence 4566676665522 2346778999999997 45555554
No 312
>PRK07326 short chain dehydrogenase; Provisional
Probab=22.05 E-value=1.5e+02 Score=21.71 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=20.2
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++.|.++... ..++..|.++|+.|+..+.
T Consensus 8 ~ilItGatg~iG---~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKGIG---FAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCcHH---HHHHHHHHHCCCEEEEeeC
Confidence 566777666532 3444556677999998874
No 313
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=22.04 E-value=1.4e+02 Score=22.32 Aligned_cols=32 Identities=9% Similarity=-0.015 Sum_probs=20.8
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.+++.|..+. .-..+++.|.+.|+.|+..+.+
T Consensus 12 ~vlItGa~g~---iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 12 RALVTGSSQG---IGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred EEEEECCcch---HHHHHHHHHHHcCCEEEEEeCC
Confidence 4667776555 2344455567779999987753
No 314
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=22.02 E-value=1.9e+02 Score=21.72 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=25.9
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRG 73 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG 73 (230)
+|.+.-+-||.... .-..++..+++.|++|+.+|.--
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 45555655665443 45566777888899999999854
No 315
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=21.95 E-value=2.1e+02 Score=21.89 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=27.5
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
+|-+. |-||.... ..-.++..|++.|++|+.+|.--.|.
T Consensus 3 ~iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~~ 42 (274)
T PRK13235 3 KVAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKAD 42 (274)
T ss_pred EEEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCccc
Confidence 45555 66666544 45667777899999999999854443
No 316
>KOG2585|consensus
Probab=21.93 E-value=1.5e+02 Score=24.82 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d 70 (230)
.|.|+.+.|.+.+...-. ..++.|+.+||..+.+-
T Consensus 266 ~P~V~Ilcgpgnnggdg~-v~gRHL~~~G~~~vi~~ 300 (453)
T KOG2585|consen 266 WPLVAILCGPGNNGGDGL-VCGRHLAQHGYTPVIYY 300 (453)
T ss_pred CceEEEEeCCCCccchhH-HHHHHHHHcCceeEEEe
Confidence 577888888777754433 37788999998766554
No 317
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=21.92 E-value=1.5e+02 Score=21.33 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
.|.++++||...........+++.|.+.|..|-..-++|.
T Consensus 166 ~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~ 205 (211)
T PF07859_consen 166 LPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGM 205 (211)
T ss_dssp CHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTE
T ss_pred CCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 6789999998876544455667778888988766666654
No 318
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=21.86 E-value=99 Score=19.06 Aligned_cols=31 Identities=16% Similarity=0.025 Sum_probs=15.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCc-eEEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKC-NVLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~-~vi~~d 70 (230)
.++||++.++..+ ...+..+...|| +|..++
T Consensus 57 ~~ivv~c~~g~~s-----~~~~~~l~~~G~~~v~~l~ 88 (96)
T cd01529 57 TRYVLTCDGSLLA-----RFAAQELLALGGKPVALLD 88 (96)
T ss_pred CCEEEEeCChHHH-----HHHHHHHHHcCCCCEEEeC
Confidence 5677777543322 223334566777 455444
No 319
>PRK03094 hypothetical protein; Provisional
Probab=21.82 E-value=78 Score=19.41 Aligned_cols=20 Identities=15% Similarity=0.127 Sum_probs=16.1
Q ss_pred hHHHHHHhhccCCceEEEEe
Q psy18021 51 RLHNVAGLHSMLKCNVLMVE 70 (230)
Q Consensus 51 ~~~~~~~~~~~~g~~vi~~d 70 (230)
-+..+.+.|.++||.|+-++
T Consensus 9 ~Ls~i~~~L~~~GYeVv~l~ 28 (80)
T PRK03094 9 SLTDVQQALKQKGYEVVQLR 28 (80)
T ss_pred CcHHHHHHHHHCCCEEEecC
Confidence 35667888999999998775
No 320
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=21.82 E-value=1.3e+02 Score=19.44 Aligned_cols=32 Identities=13% Similarity=0.034 Sum_probs=14.9
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCce-EEEEe
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCN-VLMVE 70 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~-vi~~d 70 (230)
.++|+++.+++.. .......|...||. |..++
T Consensus 80 ~~vv~~c~~g~~~----a~~~~~~l~~~G~~~v~~l~ 112 (122)
T cd01448 80 DTVVVYDDGGGFF----AARAWWTLRYFGHENVRVLD 112 (122)
T ss_pred CEEEEECCCCCcc----HHHHHHHHHHcCCCCEEEec
Confidence 4566666554222 12223345566765 55443
No 321
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=21.61 E-value=64 Score=24.15 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=23.2
Q ss_pred CcCCCcHHHHHHHHhCCC--CccccceEEEecCC
Q psy18021 74 YGKSQGGAVAIDLLARPE--YASKIWCLIVENTF 105 (230)
Q Consensus 74 ~G~s~Gg~~a~~~a~~~~--~~~~i~~~i~~~~~ 105 (230)
.|.|.||.+|..++.... ..++|..+....+.
T Consensus 89 ~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 89 TGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred EEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 577889999999888742 14578888765554
No 322
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=21.54 E-value=1.9e+02 Score=22.10 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=28.5
Q ss_pred EEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 38 LVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 38 vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
|-+. |-||.... ..-.++..|+++|++|+.+|.--+|.+.
T Consensus 4 iav~-gKGGVGKTT~a~nLA~~La~~G~rVllvD~Dpq~~~~ 44 (273)
T PRK13232 4 IAIY-GKGGIGKSTTTQNLTAALSTMGNKILLVGCDPKADST 44 (273)
T ss_pred EEEE-CCCCCcHHHHHHHHHHHHHhhCCCeEEEecccccccc
Confidence 3344 77777644 4566777789999999999996655544
No 323
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=21.54 E-value=46 Score=27.85 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=36.3
Q ss_pred EEEEecCCcccChHHHHHHHHHhCCCcceEEEeCCCCCCCcCCCCcHHHHHHHHHHH
Q psy18021 147 FFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTISQFLAK 203 (230)
Q Consensus 147 l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 203 (230)
-+++++.|..|+.+.++..- .. ....+.++ +.|..+...+++.+.|..||..
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~~--~~~~~~l~-~~H~~il~n~~v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--LN--AVARVGVP-GDHRGILRDEHVFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhccC--cc--ccccccCC-chHHHHhcCHHHHHHHHHHHhc
Confidence 55678888888877665321 11 13334555 7899988888899999999954
No 324
>PRK08703 short chain dehydrogenase; Provisional
Probab=21.52 E-value=1.6e+02 Score=21.66 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=20.7
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.+++.|..+... ..+++.|.++|++|+..+.+
T Consensus 8 ~vlItG~sggiG---~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 8 TILVTGASQGLG---EQVAKAYAAAGATVILVARH 39 (239)
T ss_pred EEEEECCCCcHH---HHHHHHHHHcCCEEEEEeCC
Confidence 556667665522 33455667789999988753
No 325
>PF10432 bact-PGI_C: Bacterial phospho-glucose isomerase C-terminal region; InterPro: IPR019490 Phosphoglucose isomerase (PGI) catalyses the interconversion of phosphoglucose and phosphofructose, and is a component of many sugar metabolic pathways. In some archaea and bacteria PGI activity occurs via a bifunctional enzyme that also exhibits phosphomannose isomerase (PMI) activity. Though not closely related to eukaryotic PGIs, the bifunctional enzyme is similar enough that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This entry represents the C-terminal half of the bifunctional PGI/PMI enzyme, which contains many of the active catalytic site residues. The enzyme is thought to use the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity; PDB: 1TZB_A 1X9H_A 1TZC_B 1X9I_A 1WIW_A.
Probab=21.48 E-value=2e+02 Score=20.05 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=36.5
Q ss_pred CcEEEEEcCCCCCch--hhHHHHHHhhccCCceEEEEeccCCcCCC--------cHHHHHHHHhCC
Q psy18021 35 TMTLVYLHGNAGNIG--HRLHNVAGLHSMLKCNVLMVEYRGYGKSQ--------GGAVAIDLLARP 90 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~--~~~~~~~~~~~~~g~~vi~~d~rG~G~s~--------Gg~~a~~~a~~~ 90 (230)
+..+|++........ .......+.+.++|..|..++.+|-+.=. |+.+++++|..+
T Consensus 72 ~~~~v~l~d~~~~~~~~~r~~~~~e~~~~~~~~v~~v~~~g~s~l~rl~~li~l~d~aS~YLA~~~ 137 (155)
T PF10432_consen 72 RLRVVLLRDPEDHPRVQRRVEITREIAEDRGVRVIEVEAEGGSPLERLASLIYLGDYASVYLALLY 137 (155)
T ss_dssp TEEEEEEC-TCCHHHHHHHHHHHHHHHTTCSSEEEEE--SCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEEcCCccccchhhhHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777777665532 25566677778889999999887543111 899999888665
No 326
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.41 E-value=94 Score=25.18 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCcC
Q psy18021 35 TMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGK 76 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G~ 76 (230)
..+|+.+.|+-.+ ...+.+|.++||.|+.+-+.-|..
T Consensus 4 ~kV~v~mSGGVDS-----SVaA~lLk~QGyeViGl~m~~~~~ 40 (356)
T COG0482 4 KKVLVGMSGGVDS-----SVAAYLLKEQGYEVIGLFMKNWDE 40 (356)
T ss_pred cEEEEEccCCHHH-----HHHHHHHHHcCCeEEEEEEEeecc
Confidence 4578888887666 445667888999999999988774
No 327
>PRK08643 acetoin reductase; Validated
Probab=21.39 E-value=1.6e+02 Score=22.03 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=20.5
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
++++-|..+. .-..+++.|.++|++|+..+.+
T Consensus 4 ~~lItGas~g---iG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 4 VALVTGAGQG---IGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4455565555 2344555677789999988753
No 328
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=21.28 E-value=2.7e+02 Score=18.79 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=24.9
Q ss_pred CCceeEEEEc-cCCCEEEEEEecCCCcccCCCCcEEEEEcCCC
Q psy18021 4 LPYESIFVKS-LDGTKIHLYFIPQPDVKAKCETMTLVYLHGNA 45 (230)
Q Consensus 4 ~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~~~~p~vv~~HG~~ 45 (230)
+++|.+.+-. .+|.++..|.++....+ -+|.+.|..
T Consensus 39 ~p~E~V~V~Nv~NG~Rf~TYvI~g~~GS------g~I~lNGAA 75 (126)
T PRK05449 39 LENEKVQIVNVNNGARFETYVIAGERGS------GVICLNGAA 75 (126)
T ss_pred CCCCEEEEEECCCCcEEEEEEEEcCCCC------CEEEeCCHH
Confidence 3577777654 46899999888876533 377777754
No 329
>PRK07933 thymidylate kinase; Validated
Probab=21.09 E-value=2.5e+02 Score=20.75 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=30.0
Q ss_pred EEEEcCCCCCc-hhhHHHHHHhhccCCceEEEEeccCCcCCC
Q psy18021 38 LVYLHGNAGNI-GHRLHNVAGLHSMLKCNVLMVEYRGYGKSQ 78 (230)
Q Consensus 38 vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~d~rG~G~s~ 78 (230)
+|.+=|.-++. ......+.+.|...|+.|+....+.+|.+.
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 45556666664 346677788888899999999999777654
No 330
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=21.00 E-value=1.8e+02 Score=24.43 Aligned_cols=37 Identities=11% Similarity=-0.006 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEec
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~ 71 (230)
+|.||++-|..|.... ....++..+.+.|+.|...+.
T Consensus 99 ~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 99 KQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 5789999999988653 455566667778988877765
No 331
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=20.84 E-value=2.9e+02 Score=18.97 Aligned_cols=39 Identities=10% Similarity=0.034 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCCc---hhhHHHHHHhhccCCc---eEEEEeccC
Q psy18021 35 TMTLVYLHGNAGNI---GHRLHNVAGLHSMLKC---NVLMVEYRG 73 (230)
Q Consensus 35 ~p~vv~~HG~~~~~---~~~~~~~~~~~~~~g~---~vi~~d~rG 73 (230)
+-+||+.|++.+.. ..-...+.+.|...|| ++++++.++
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 44788889988763 2344455566788887 577777654
No 332
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=20.79 E-value=2.9e+02 Score=22.90 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 36 MTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 36 p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
.+|.+...-||.... .--.++..|+..|+.|+++|+--.|
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 455555555555433 4566777788999999999986543
No 333
>PRK08339 short chain dehydrogenase; Provisional
Probab=20.54 E-value=1.7e+02 Score=22.13 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=21.1
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
++++-|.++.. -..+++.|.++|++|+..+.
T Consensus 10 ~~lItGas~gI---G~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKGI---GFGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCcH---HHHHHHHHHHCCCEEEEEeC
Confidence 56677766652 34456667788999988775
No 334
>PRK07667 uridine kinase; Provisional
Probab=20.49 E-value=2.6e+02 Score=20.16 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCC
Q psy18021 35 TMTLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGY 74 (230)
Q Consensus 35 ~p~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~ 74 (230)
.+.||.+-|..++..+ ....+.+.+.+.|..+..++...+
T Consensus 16 ~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 16 NRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 4589999999998754 445566667777777666666554
No 335
>PRK06953 short chain dehydrogenase; Provisional
Probab=20.46 E-value=1.8e+02 Score=21.16 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=20.5
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEecc
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYR 72 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~r 72 (230)
.+++.|..+... ..+++.|.+.|+.|+..+.+
T Consensus 3 ~vlvtG~sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 3 TVLIVGASRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred eEEEEcCCCchh---HHHHHHHHhCCCEEEEEECC
Confidence 356777766532 34455566779999888754
No 336
>KOG1201|consensus
Probab=20.43 E-value=1.8e+02 Score=22.94 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=26.0
Q ss_pred EEEEEcCCCCCchhhHHHHHHhhccCCceEEEEeccCCc
Q psy18021 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 37 ~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
-++++-|+++.. -..++..|+++|..++.+|--..|
T Consensus 39 ~~vLITGgg~Gl---Gr~ialefa~rg~~~vl~Din~~~ 74 (300)
T KOG1201|consen 39 EIVLITGGGSGL---GRLIALEFAKRGAKLVLWDINKQG 74 (300)
T ss_pred CEEEEeCCCchH---HHHHHHHHHHhCCeEEEEeccccc
Confidence 478888877763 345566688899999999986544
No 337
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=20.36 E-value=2.4e+02 Score=22.69 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=26.5
Q ss_pred EEEEEcCCCCCchh-hHHHHHHhhccCCceEEEEeccCCc
Q psy18021 37 TLVYLHGNAGNIGH-RLHNVAGLHSMLKCNVLMVEYRGYG 75 (230)
Q Consensus 37 ~vv~~HG~~~~~~~-~~~~~~~~~~~~g~~vi~~d~rG~G 75 (230)
-+|.+.|-++.... ....++..++++|++|+.+|.--++
T Consensus 32 ~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D~~~ 71 (329)
T cd02033 32 QIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCDPKS 71 (329)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeecc
Confidence 45555577776544 4566777788899999988874343
No 338
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=20.23 E-value=96 Score=16.15 Aligned_cols=8 Identities=25% Similarity=0.737 Sum_probs=6.8
Q ss_pred cEEEEEcC
Q psy18021 36 MTLVYLHG 43 (230)
Q Consensus 36 p~vv~~HG 43 (230)
..|+++||
T Consensus 33 ~~vilVHG 40 (43)
T PF07521_consen 33 RKVILVHG 40 (43)
T ss_dssp SEEEEESS
T ss_pred CEEEEecC
Confidence 46999999
No 339
>PRK05717 oxidoreductase; Validated
Probab=20.20 E-value=1.6e+02 Score=22.02 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=21.8
Q ss_pred EEEEcCCCCCchhhHHHHHHhhccCCceEEEEec
Q psy18021 38 LVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEY 71 (230)
Q Consensus 38 vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~d~ 71 (230)
.+++-|..+.. -..+++.|.++|+.|+..|.
T Consensus 12 ~vlItG~sg~I---G~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 12 VALVTGAARGI---GLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred EEEEeCCcchH---HHHHHHHHHHcCCEEEEEcC
Confidence 67788877663 34445566778999998874
Done!