RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18021
(230 letters)
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 66.1 bits (160), Expect = 2e-13
Identities = 28/234 (11%), Positives = 62/234 (26%), Gaps = 60/234 (25%)
Query: 10 FVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMV 69
++ +G ++H++ P + T++ G A + H L + +V
Sbjct: 8 VLRVNNGQELHVWETPPKENVPFKNN-TILIASGFARRMDHFAGLAEYLSTN-GFHVFRY 65
Query: 70 EYRG--------------------------------------YGKSQGGAVAIDLLARPE 91
+ S VA ++++ E
Sbjct: 66 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLE 125
Query: 92 YASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFC------------FKNKFLSHW-- 137
+ I + V N ++ + ++P ++ F HW
Sbjct: 126 LSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDT 185
Query: 138 ------KIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHN 185
K+ S P ND V + + + ++ SH+
Sbjct: 186 LDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD 239
>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga
maritima [TaxId: 2336]}
Length = 322
Score = 43.9 bits (102), Expect = 6e-06
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 115 LLKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILK 174
LK + ++ +F + F R P F VGL D++ PPS + + G K
Sbjct: 234 FLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGP-K 292
Query: 175 QIVLFESGSH 184
+I ++ +H
Sbjct: 293 EIRIYPYNNH 302
Score = 34.7 bits (78), Expect = 0.007
Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 4/88 (4%)
Query: 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSML 62
+ + G +I + + + K +V G G G +
Sbjct: 52 TVEAYDVTFSGYRGQRIKGWLLVPKLEEEKL--PCVVQYIGYNGGRGFPHD--WLFWPSM 107
Query: 63 KCNVLMVEYRGYGKSQGGAVAIDLLARP 90
+++ RG G D P
Sbjct: 108 GYICFVMDTRGQGSGWLKGDTPDYPEGP 135
>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase
{Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 360
Score = 42.3 bits (98), Expect = 3e-05
Identities = 29/246 (11%), Positives = 61/246 (24%), Gaps = 50/246 (20%)
Query: 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSML 62
P E + IP+ ++ L G + L
Sbjct: 103 SPPAERHELVVDGIPMPVYVRIPEGPGPHPA----VIMLGGLEST-KEESFQMENLVLDR 157
Query: 63 KCNVLMVEYRGYGKSQG------------GAVAIDLLARPEYASK--------IWCLIVE 102
+ G G+ AV L + +
Sbjct: 158 GMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYAL 217
Query: 103 NTFTSIPDMALI--------LLKWNVLRKMPLFCFK----------------NKFLSHWK 138
+ P +A L W++ + +K +
Sbjct: 218 KSAACEPRLAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDV 277
Query: 139 IERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYHTIS 198
+ +++ PT+ + G++D VP S + + E +V+ + G H ++
Sbjct: 278 LSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMA 336
Query: 199 QFLAKA 204
+L
Sbjct: 337 DWLYDV 342
>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus
subtilis [TaxId: 1423]}
Length = 318
Score = 41.3 bits (95), Expect = 4e-05
Identities = 13/135 (9%), Positives = 37/135 (27%), Gaps = 7/135 (5%)
Query: 3 GLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSML 62
G+ + KS +I ++ +V HG + +H +
Sbjct: 53 GVKVYRLTYKSFGNARITGWYAVPDKEGPHP---AIVKYHGYNASYDGEIHEMVNWALH- 108
Query: 63 KCNVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLR 122
+ RG +S+ +++ ++ ++T+ + V+
Sbjct: 109 GYATFGMLVRGQQRSEDTSISPH---GHALGWMTKGILDKDTYYYRGVYLDAVRALEVIS 165
Query: 123 KMPLFCFKNKFLSHW 137
++
Sbjct: 166 SFDEVDETRIGVTGG 180
Score = 39.8 bits (91), Expect = 1e-04
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 118 WNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV 177
+ ++ + F +RV P +GL D + PPS + + + K++
Sbjct: 233 GSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELK 291
Query: 178 LFESGSHNDTWKCSGYYHTISQFLAK 203
++ H + F +
Sbjct: 292 VYRYFGHEYI---PAFQTEKLAFFKQ 314
>d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 218
Score = 40.7 bits (94), Expect = 5e-05
Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 21/192 (10%)
Query: 9 IFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNV----AGLHSMLKC 64
+ G ++ + P + A + LH + G + + L
Sbjct: 3 VIFNGPAG-RLEGRYQPSKEKSAP----IAIILHPHPQFGGTMNNQIVYQLFYLFQKRGF 57
Query: 65 NVLMVEYRGYGKSQ----GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNV 120
L +R G+SQ GA + A + ++ + + + +
Sbjct: 58 TTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLL 117
Query: 121 LRKMP-----LFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHE---NSGGI 172
+R+ + + + I G D + P + L E GI
Sbjct: 118 MRRPEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGI 177
Query: 173 LKQIVLFESGSH 184
L +H
Sbjct: 178 LITHRTLPGANH 189
>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis
[TaxId: 1423]}
Length = 186
Score = 38.9 bits (89), Expect = 2e-04
Identities = 23/191 (12%), Positives = 48/191 (25%), Gaps = 27/191 (14%)
Query: 35 TMTLVYLHGNAGN-IGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQGGAVAIDLLARPEYA 93
T + +HG + H + ++ + + L
Sbjct: 1 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHTL 60
Query: 94 SKIWCLIVENTFTSIPDMALILLK---------------WNVLRKMPLFCFKNKFLSHWK 138
+ L+ + L L+ ++ L F H K
Sbjct: 61 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQK 120
Query: 139 IERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHNDTWKCSGYYH--- 195
I + I +D +VP S L + + + G H G+
Sbjct: 121 IIESAKHRAVIASKDDQIVPFSFSKDLAQQID---AALYEVQHGGHFLE--DEGFTSLPI 175
Query: 196 ---TISQFLAK 203
++ + +K
Sbjct: 176 VYDVLTSYFSK 186
>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId:
1905]}
Length = 260
Score = 38.5 bits (88), Expect = 3e-04
Identities = 23/188 (12%), Positives = 46/188 (24%), Gaps = 10/188 (5%)
Query: 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKC 64
V SL + I P A +V G + + +
Sbjct: 22 ATSQTSVSSLVASGFGGGTIYYPTSTADGTFGAVVISPGFTAYQSS-IAWLGPRLASQGF 80
Query: 65 NVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIP------DMALILLKW 118
V ++ + LL+ +Y ++ + T + L
Sbjct: 81 VVFTIDTNTTLDQ-PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAA 139
Query: 119 NVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHEN--SGGILKQI 176
+ + + + PT + D + P + K G + K
Sbjct: 140 KSRTSLKAAIPLTGWNTDKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAY 199
Query: 177 VLFESGSH 184
+ SH
Sbjct: 200 LELRGASH 207
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 37.8 bits (86), Expect = 6e-04
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 2 HGLPYESIFVKSLDGTKIHLYFIPQPDVKAKCETM--TLVYLHGNAGNIGHRLHNVAGLH 59
G P E V + DG + + IP ++ HG + + + N+
Sbjct: 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNS 82
Query: 60 SMLK-----CNVLMVEYRGYG 75
+V + RG
Sbjct: 83 LAFILADAGYDVWLGNSRGNT 103
Score = 32.0 bits (71), Expect = 0.053
Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Query: 137 WKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHND 186
+ + + P G ND L P + L L +H D
Sbjct: 307 YNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN-LIYHRKIPPYNHLD 355
>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris
[TaxId: 339]}
Length = 218
Score = 35.6 bits (81), Expect = 0.002
Identities = 36/221 (16%), Positives = 60/221 (27%), Gaps = 18/221 (8%)
Query: 4 LPYES--IFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIG----HRLHNVAG 57
P ES + + G +P+PDV + +T + H + G + A
Sbjct: 4 FPTESAALTLDGPVGPLDVAVDLPEPDVAVQP--VTAIVCHPLSTEGGSMHNKVVTMAAR 61
Query: 58 LHSMLKCNVLMVEYRGYGKSQ----GGAVAIDLLARPEYASKIWCLIVENTFTSIPDMAL 113
L V+ +R G S G D L + A
Sbjct: 62 ALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAY 121
Query: 114 ILLKWNVLRKMPLFCFKNKFLSHWKIE--RVSNPTFFIVGLNDHLVPPSMMVKLHENSGG 171
+ L+ + + W + I G D +V P + E
Sbjct: 122 VSLRAAAALEPQVLISIAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQ 181
Query: 172 ILKQIVLFESGSHNDTWKCSGYYHTISQFLAKANDFLPTPP 212
+V SH K + + + +LP P
Sbjct: 182 -QPTLVRMPDTSHFFHRKLIDLRGALQHGVRR---WLPATP 218
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 280
Score = 34.0 bits (76), Expect = 0.010
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHG 43
IF S DGTKI ++ + + +K +Y +G
Sbjct: 8 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYG 44
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme,
C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 260
Score = 32.2 bits (71), Expect = 0.046
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHG 43
++V+S DG+++ Y + T+V +HG
Sbjct: 13 RLVWVESFDGSRVPTYVLESGRAPTPGP--TVVLVHG 47
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 242
Score = 31.4 bits (69), Expect = 0.062
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 118 WNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV 177
K + ++ + PTF + +D ++ P ++ +KQI
Sbjct: 152 KQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIK 211
Query: 178 LFESGSHNDTWKCSG--YYHTISQFLAK 203
+E H T + I FL
Sbjct: 212 WYEQSGHVITLDQEKDQLHEDIYAFLES 239
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 31.3 bits (69), Expect = 0.081
Identities = 12/68 (17%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Query: 118 WNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV 177
V + F I +V PT + G +D +VP K +
Sbjct: 183 AYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS--WGY 240
Query: 178 LFESGSHN 185
+ H
Sbjct: 241 IIPHCGHW 248
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 31.4 bits (69), Expect = 0.086
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 13/79 (16%)
Query: 1 MHGL-----PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNV 55
+ GL Y+S ++ + DG +I+ P+ K V++HG G H
Sbjct: 1 LRGLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGK------PAVFIHGGPGGGISPHHRQ 54
Query: 56 AGLHSMLKCNVLMVEYRGY 74
+ VL+ + RG
Sbjct: 55 LFDPE--RYKVLLFDQRGC 71
Score = 28.7 bits (62), Expect = 0.56
Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Query: 109 PDMALILLKWNVLRKMPLFCFKNKFLSHWKIERVSN-PTFFIVGLNDHLVPPSMMVKLHE 167
D AL + L ++ + + + P + G D L +
Sbjct: 219 DDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAK 278
Query: 168 NSGGILKQIVLFESGSH 184
++ + E H
Sbjct: 279 AWPEA--ELHIVEGAGH 293
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 30.7 bits (67), Expect = 0.12
Identities = 14/167 (8%), Positives = 39/167 (23%)
Query: 16 GTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYG 75
+ + L+ ++ + + +Y
Sbjct: 122 VQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVT 181
Query: 76 KSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLS 135
S P + + V ++ +
Sbjct: 182 PSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAI 241
Query: 136 HWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESG 182
+ + TF +G+ D L+ P +M + G + + + ++G
Sbjct: 242 SFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAG 288
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 30.6 bits (67), Expect = 0.13
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 138 KIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSHN 185
++ + TF G +D VP +KL N ++ +F H
Sbjct: 218 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDA--RLHVFSKCGHW 263
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 30.6 bits (67), Expect = 0.14
Identities = 7/61 (11%), Positives = 17/61 (27%), Gaps = 2/61 (3%)
Query: 124 MPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGS 183
K+ ++ P + D ++ P M + + + + E
Sbjct: 240 YRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL--KRGHIEDCG 297
Query: 184 H 184
H
Sbjct: 298 H 298
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 30.4 bits (68), Expect = 0.14
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 74 YGKSQGGAVAIDLLAR-PEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNK 132
G + GG +A L + + + + + + +N + K
Sbjct: 16 SGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMK 75
Query: 133 FLSHWKIERVSN----PTFFIVGLNDHLVPPSMMVKLHE 167
S +I V+N + G +D V P++M +L
Sbjct: 76 SWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKA 114
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 29.5 bits (64), Expect = 0.28
Identities = 8/62 (12%), Positives = 15/62 (24%), Gaps = 2/62 (3%)
Query: 124 MPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGS 183
++ V+ PT I +D + P L ++
Sbjct: 217 AHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTA--RLAEIPGMG 274
Query: 184 HN 185
H
Sbjct: 275 HA 276
Score = 27.9 bits (60), Expect = 0.98
Identities = 6/39 (15%), Positives = 14/39 (35%)
Query: 37 TLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYG 75
L+ + G + A + +V+ ++R G
Sbjct: 24 ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTG 62
>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 258
Score = 29.4 bits (64), Expect = 0.33
Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 7/134 (5%)
Query: 4 LPYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLK 63
+P + + L+ TK I P + L+ ++ + + L
Sbjct: 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLA 60
Query: 64 CNVLMVEYRGYGKSQGGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRK 123
++ G+ G + I + + A K +
Sbjct: 61 STENIIVASFDGRGSGY-------QGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDN 113
Query: 124 MPLFCFKNKFLSHW 137
+ + + +
Sbjct: 114 KRIAIWGWSYGGYV 127
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
42739]}
Length = 319
Score = 29.0 bits (64), Expect = 0.43
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Query: 38 LVYLHGNAGN--IGHRLHNVAGLHSMLK---CNVLMVEYRGYGKSQGGAVAIDLLAR 89
++ +HG AG + + G+ S L+ V + G+ G + L
Sbjct: 11 VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLA 67
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 29.0 bits (63), Expect = 0.47
Identities = 14/79 (17%), Positives = 23/79 (29%), Gaps = 11/79 (13%)
Query: 1 MHGL-----PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNV 55
M L PY+ +K D ++ P K +V LHG G +
Sbjct: 1 MRTLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGK------PVVMLHGGPGGGCNDKMRR 54
Query: 56 AGLHSMLKCNVLMVEYRGY 74
+ + + G
Sbjct: 55 FHDPAKYRIVLFDQRGSGR 73
Score = 28.6 bits (62), Expect = 0.64
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 145 PTFFIVGLNDHLVPPSMMVKLHENSGGILKQIVLFESGSH 184
P + G D + P LH+ Q+ + + H
Sbjct: 257 PGVIVHGRYDVVCPLQSAWDLHKAWPKA--QLQISPASGH 294
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 27.6 bits (59), Expect = 1.3
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 9/65 (13%)
Query: 10 FVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMV 69
+ DG +I K + +V++HG N + + +
Sbjct: 2 ICTTRDGVEIF--------YKDWGQGRPVVFIHGWPLNGDAWQDQLKAVVD-AGYRGIAH 52
Query: 70 EYRGY 74
+ RG+
Sbjct: 53 DRRGH 57
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 27.2 bits (58), Expect = 2.0
Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 118 WNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV 177
V+ + ++ + + R+ + G D +VP + L ++ ++V
Sbjct: 197 QEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA--ELV 254
Query: 178 LFESGSH 184
+ + H
Sbjct: 255 VLDRCGH 261
>d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp.,
B13 [TaxId: 306]}
Length = 233
Score = 26.6 bits (57), Expect = 2.8
Identities = 8/69 (11%), Positives = 15/69 (21%), Gaps = 5/69 (7%)
Query: 7 ESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNV 66
E I ++S DG A +V G + +
Sbjct: 4 EGISIQSYDGHTFGALVGSPAKAPAP----VIVIAQEIFG-VNAFMRETVSWLVDQGYAA 58
Query: 67 LMVEYRGYG 75
+ +
Sbjct: 59 VCPDLYARQ 67
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2)
{Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 258
Score = 26.4 bits (56), Expect = 3.0
Identities = 8/46 (17%), Positives = 13/46 (28%), Gaps = 1/46 (2%)
Query: 34 ETMTLVYLHGNAGNIGHRLHNVAGLHSMLKCNVLMVEYRGYGKSQG 79
E V +HG G + + L V ++ G
Sbjct: 1 EGKHFVLVHGACHG-GWSWYKLKPLLEAAGHKVTALDLAASGTDLR 45
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 26.4 bits (56), Expect = 3.2
Identities = 9/69 (13%), Positives = 16/69 (23%), Gaps = 1/69 (1%)
Query: 116 LKWNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQ 175
+ + P I GL D VP + +++
Sbjct: 207 IHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNY-T 265
Query: 176 IVLFESGSH 184
+ E H
Sbjct: 266 METIEDCGH 274
>d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger
domain-containing protein 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 24.9 bits (54), Expect = 3.2
Identities = 5/34 (14%), Positives = 14/34 (41%), Gaps = 5/34 (14%)
Query: 9 IFVKSLDGTKIHLYFIPQP-----DVKAKCETMT 37
I V+++DG+K +++ + +
Sbjct: 3 IQVRTIDGSKTCTIEDVSRKATIEELRERVWALF 36
>d1vgeh1 b.1.1.1 (H:1-122) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 122
Score = 25.5 bits (55), Expect = 3.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 163 VKLHENSGGILKQIVLFESGSHNDTWKCSGYYHT 196
VKL E SG +K+ S + K SGY T
Sbjct: 2 VKLLEQSGAEVKK----PGASVKVSCKASGYSFT 31
>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase
PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
Length = 405
Score = 25.7 bits (55), Expect = 5.1
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Query: 118 WNVLRKMPLFCFKNKFLSHWKIERVSNPTFFIVGLNDHLVPPSMMVKLHENSGGILKQIV 177
F +L + ++V + GL D V P + +
Sbjct: 289 DRKSGDYNQFWHDRNYLINT--DKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHA 346
Query: 178 LFESGSHN--DTWKCSGYYHTISQFLAK 203
G+H ++W+ + TI+ +
Sbjct: 347 FLHRGAHIYMNSWQSIDFSETINAYFVA 374
>d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger
domain-containing protein 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 24.1 bits (52), Expect = 5.1
Identities = 6/34 (17%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 9 IFVKSLDGTKIHLYFIPQP-----DVKAKCETMT 37
I V+++DG + H +++ K + +
Sbjct: 3 IQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELF 36
>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin
hydrolase IroE {Escherichia coli [TaxId: 562]}
Length = 265
Score = 25.0 bits (53), Expect = 9.1
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Query: 6 YESIFVKSLDGTKIHLYFIPQPDVKAKCETM-TLVYLHGNAGNIGHRLHNVAGLHSMLKC 64
+ + S+DGT+ + + P+ A L L GNA + L
Sbjct: 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPP 72
Query: 65 NVLMVEYRGYG 75
++ V Y+
Sbjct: 73 VIVAVGYQTNL 83
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like
protein 6, DPP6, C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 258
Score = 24.7 bits (52), Expect = 9.7
Identities = 25/256 (9%), Positives = 53/256 (20%), Gaps = 57/256 (22%)
Query: 5 PYESIFVKSLDGTKIHLYFIPQPDVKAKCETMTLVYLHG--------------------- 43
P +D + + + L+ + G
Sbjct: 1 PKVEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVS 60
Query: 44 ----------------------NAGNIGHRLHNVAGLHSMLKCNVLMVEYR-----GYGK 76
+ L ++ + +GK
Sbjct: 61 SHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGK 120
Query: 77 SQGGAVAIDLLARPEYASKIWCLIVENTFTSIPDMALILLKWNVLRKMPLFCFKNKFLSH 136
GG ++ +L ++ + + I D L ++ +
Sbjct: 121 DYGGYLSTYILPAKG-ENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMT 179
Query: 137 WKIERV----SNPTFFIVGLNDHLVPPSMMVKLHE--NSGGILKQIVLFESGSHNDTWKC 190
RV I D + +L G + ++ SH T
Sbjct: 180 KVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSS 239
Query: 191 SG--YYHTISQFLAKA 204
Y +I F +
Sbjct: 240 LKQHLYRSIINFFVEC 255
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.137 0.429
Gapped
Lambda K H
0.267 0.0603 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 864,284
Number of extensions: 38875
Number of successful extensions: 143
Number of sequences better than 10.0: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 45
Length of query: 230
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 148
Effective length of database: 1,281,736
Effective search space: 189696928
Effective search space used: 189696928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.7 bits)