BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18023
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 18 ALFRMFDGLTPVTDGSTEE-SEINLESSNGIEEQEME------KECKVDFNKL----DQI 66
A R +GL D +E NLE+ I E E+ K+ K F + +++
Sbjct: 1709 AFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGESRGENEEM 1768
Query: 67 KKELDQIIKELDQIIKELDLIIKESNQVIKELNLI--IKESNQNKLDQIKKELDQMVKEL 124
+K+L + + + + + +++E+ I+E N + + + N L++ K+ ++ +++
Sbjct: 1769 EKDLREKLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQI 1828
Query: 125 DLTIKELNQIIKELNQIIKELNQIVE 150
+ T+KE N I+ E N++ E+N I++
Sbjct: 1829 ENTLKEGNDILDEANRLADEINSIID 1854
Score = 37.0 bits (84), Expect = 0.042, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 48 EEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQV--IKELNLIIKES 105
E +EMEK+ + KL K ++D + +++E I+E+N++ + + N+ E
Sbjct: 1764 ENEEMEKDLR---EKLADYKNKVD----DAWDLLREATDKIREANRLFAVNQKNMTALEK 1816
Query: 106 NQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQI 148
+ ++ K++++ +KE + + E N++ E+N II + I
Sbjct: 1817 KKEAVESGKRQIENTLKEGNDILDEANRLADEINSIIDYVEDI 1859
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 38.1 bits (87), Expect = 0.023, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 64 DQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLI--IKESNQNKLDQIKKELDQMV 121
+ ++K+L Q + E + + +++E+ ++ N + + N L+ K+ ++
Sbjct: 1762 EDMEKDLQQKLAEYKNKLDDAWDLLREATDKTRDANRLSAANQKNMTILETKKEAIEGSK 1821
Query: 122 KELDLTIKELNQIIKELNQIIKELNQIVE 150
++++ T+KE N I+ E NQ++ E+N +++
Sbjct: 1822 RQIENTLKEGNDILDEANQLLGEINSVID 1850
Score = 37.0 bits (84), Expect = 0.042, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 48 EEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQV--IKELNLIIKES 105
+ ++MEK+ + KL + K +LD + +++E +++N++ + N+ I E+
Sbjct: 1760 QNEDMEKDLQ---QKLAEYKNKLD----DAWDLLREATDKTRDANRLSAANQKNMTILET 1812
Query: 106 NQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQI 148
+ ++ K++++ +KE + + E NQ++ E+N +I ++ I
Sbjct: 1813 KKEAIEGSKRQIENTLKEGNDILDEANQLLGEINSVIDYVDDI 1855
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 33 STEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESN 92
ST++ + + E E+E K + K+L Q I LDLI N
Sbjct: 696 STQDKNADRNAEKAAEGGEVEVVKKAPKLSVPDSAKDLFASADTFRQQISALDLICSIYN 755
Query: 93 QVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIV 149
+V + + + K Q KLD +++ L++ + EL+ E++ IKE +++K+++ ++
Sbjct: 756 KVQRTILAVEKPLVQQKLDAVEQALNRGLAELNWKCAEIDTYIKECMELVKDVDLVL 812
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 62 KLDQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLIIK------ESNQNKLDQIKK 115
KLD +++ L++ + EL+ E+D IKE +++K+++L++ ++ Q L +K
Sbjct: 772 KLDAVEQALNRGLAELNWKCAEIDTYIKECMELVKDVDLVLNTIKDNVKATQGILAMWEK 831
Query: 116 ELDQMVKELDLTIKELNQIIKELNQIIKE 144
L M + D +++ NQ+I++
Sbjct: 832 NL--MFERKDGKTYTFDELNDAFNQLIQQ 858
>sp|Q8T305|MYSP_TAESA Paramyosin OS=Taenia saginata GN=PMY PE=2 SV=1
Length = 863
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 50 QEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLIIKESN--- 106
+EME + N L+ +K E++Q ++E D+ EL+ + K + + I+EL I E
Sbjct: 464 KEMEAKYVASQNALNHLKSEMEQRLREKDE---ELENLRKSTTRTIEELTTTISEMEVRF 520
Query: 107 QNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIVEE 151
++ + ++KK+ + + EL++ + N+ LN+ K L Q V+E
Sbjct: 521 KSDMSRLKKKYEATISELEVQLDVANKANANLNRENKTLAQRVQE 565
>sp|Q03QU1|DNAK_LACBA Chaperone protein DnaK OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=dnaK PE=3 SV=1
Length = 619
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 32 GSTEESEINLESSNGIEEQEMEK---ECKVDFNKLDQIKKELDQIIKELDQIIKELDLII 88
G+ +E +I ++SS+G+ ++E+EK E K + + D+ +KE E+DQ++ + D +
Sbjct: 465 GTNKEQKITIKSSDGLSDEEIEKMMNEAKEN-EEADKKRKEEVDTKNEVDQLLFQTDKTL 523
Query: 89 KE-----SNQVIKEL----NLIIKESNQNKLDQIKKELDQMVKEL-DLTIKELNQIIKE 137
K+ S+ IK+ + + K N LD +K + D + K + DL++K Q E
Sbjct: 524 KDVKGKVSDDEIKKAEDARDALKKAQEANNLDDMKAKKDDLTKIIQDLSVKLYQQAQSE 582
>sp|Q88VM0|DNAK_LACPL Chaperone protein DnaK OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaK PE=3 SV=1
Length = 622
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECK-------VDFNKLDQI--KKELDQIIKELDQIIK 82
G+ +E +I ++SS+G+ + E+++ K D + +++ K E+DQ+I D+ +K
Sbjct: 465 GTNKEQKITIKSSSGLSDDEIDQMVKEAKENEEADKKRKEEVDLKNEVDQLIFTTDKTLK 524
Query: 83 ELDLIIKES--NQVIKELNLIIKESNQNKLDQIKKELDQMVKEL-DLTIK 129
+L+ + E + + + K + N +D++K + D + K + DL++K
Sbjct: 525 DLEGKVSEDEVKKAKDARDALKKAQDDNNIDEMKAKKDDLNKIVQDLSVK 574
>sp|Q03FR7|DNAK_PEDPA Chaperone protein DnaK OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=dnaK PE=3 SV=1
Length = 619
Score = 33.9 bits (76), Expect = 0.38, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+ +E +I ++SS+G+ ++E+++ K + +E D+ KE + E+D +I +
Sbjct: 465 GTGKEQKITIKSSSGLSDEEIDR-----MMKEAKENEEADKKRKEEVDLRNEVDQLIFTT 519
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELN 146
++ +K+L + E K K+ L++ K D + E+ +L++I+++L+
Sbjct: 520 DKTLKDLEGKVSEDEIKKAKDAKEALEKAQK--DNNLDEMKAKKDDLSKIVQDLS 572
>sp|B7IYG7|DNAK_BACC2 Chaperone protein DnaK OS=Bacillus cereus (strain G9842) GN=dnaK
PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|Q6HDK7|DNAK_BACHK Chaperone protein DnaK OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|Q634M7|DNAK_BACCZ Chaperone protein DnaK OS=Bacillus cereus (strain ZK / E33L)
GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|Q818E9|DNAK_BACCR Chaperone protein DnaK OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|B7HCU0|DNAK_BACC4 Chaperone protein DnaK OS=Bacillus cereus (strain B4264) GN=dnaK
PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|C1ESK8|DNAK_BACC3 Chaperone protein DnaK OS=Bacillus cereus (strain 03BB102) GN=dnaK
PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|B7JN39|DNAK_BACC0 Chaperone protein DnaK OS=Bacillus cereus (strain AH820) GN=dnaK
PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|Q81LS2|DNAK_BACAN Chaperone protein DnaK OS=Bacillus anthracis GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|A0RIT3|DNAK_BACAH Chaperone protein DnaK OS=Bacillus thuringiensis (strain Al Hakam)
GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|C3L5R7|DNAK_BACAC Chaperone protein DnaK OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=dnaK PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|C3P8M0|DNAK_BACAA Chaperone protein DnaK OS=Bacillus anthracis (strain A0248) GN=dnaK
PE=3 SV=1
Length = 611
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKES 91
G+++E I ++SS+G+ ++E+E+ + + + DQ KE ++ E D ++ ++
Sbjct: 462 GTSKEQAITIQSSSGLSDEEVERMVQE-----AEANADADQKRKEEVELRNEADQLVFQT 516
Query: 92 NQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
++V+K+L + + K + K+ L +++ +L +E+ L +I+++L
Sbjct: 517 DKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNEL--EEIRAKKDALQEIVQQL 568
>sp|P35418|MYSP_TAESO Paramyosin OS=Taenia solium GN=PMY PE=1 SV=2
Length = 863
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 50 QEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLIIKESN--- 106
+EME + N L+ +K E++Q ++E D+ EL+ + K + + I+EL I E
Sbjct: 464 KEMEAKYVASQNALNHLKSEMEQRLREKDE---ELENLRKSTTRTIEELTTTISEMEVRF 520
Query: 107 QNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIVEE 151
++ + ++KK+ + + EL++ + N+ LN+ K L Q V+E
Sbjct: 521 KSDMSRLKKKYEATISELEVQLDVANKANVNLNRENKTLAQRVQE 565
>sp|B3WEQ7|DNAK_LACCB Chaperone protein DnaK OS=Lactobacillus casei (strain BL23) GN=dnaK
PE=3 SV=1
Length = 624
Score = 33.5 bits (75), Expect = 0.54, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 32 GSTEESEINLESSNGIEEQE---MEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLII 88
G+ + I ++SS+G+ ++E M+KE + + + ++ K+E+D + ++DQ++ + D +
Sbjct: 463 GTGKSQNITIKSSSGLSDEEIERMKKEAEENADADEKRKEEVD-LKNDVDQLLFQTDKTL 521
Query: 89 KESNQVIKELNL---------IIKESNQNKLDQIKKELDQMVKEL-DLTIK 129
K+ + + E ++ + K +N LD +K++ D + K + D+T+K
Sbjct: 522 KDVDGKVPEEDIKKVKDAQEALKKAQQENNLDDMKQKRDDLSKLVQDMTVK 572
>sp|Q038N3|DNAK_LACC3 Chaperone protein DnaK OS=Lactobacillus casei (strain ATCC 334)
GN=dnaK PE=3 SV=1
Length = 624
Score = 33.5 bits (75), Expect = 0.54, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 32 GSTEESEINLESSNGIEEQE---MEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLII 88
G+ + I ++SS+G+ ++E M+KE + + + ++ K+E+D + ++DQ++ + D +
Sbjct: 463 GTGKSQNITIKSSSGLSDEEIERMKKEAEENADADEKRKEEVD-LKNDVDQLLFQTDKTL 521
Query: 89 KESNQVIKELNL---------IIKESNQNKLDQIKKELDQMVKEL-DLTIK 129
K+ + + E ++ + K +N LD +K++ D + K + D+T+K
Sbjct: 522 KDVDGKVPEEDIKKVKDAQEALKKAQQENNLDDMKQKRDDLSKLVQDMTVK 572
>sp|Q6F6N3|DNAK_ACIAD Chaperone protein DnaK OS=Acinetobacter sp. (strain ADP1) GN=dnaK
PE=3 SV=1
Length = 647
Score = 33.1 bits (74), Expect = 0.64, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIKELNQIIKELNQ 140
E D ++ SN+ +K+L + E + + EL+ KE D ++++ + L
Sbjct: 535 RNEADALVSSSNKAVKDLGDKVTEDEKTAITTAVSELEAATKEND--VEDIKAKTEALQN 592
Query: 141 IIKELNQ 147
I+ + Q
Sbjct: 593 ILMPITQ 599
>sp|P35417|MYSP_ECHGR Paramyosin OS=Echinococcus granulosus PE=2 SV=1
Length = 863
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 54 KECKVDF----NKLDQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLIIKESN--- 106
KE +V + N L+ +K E++Q ++E D+ EL+ + K + + I+EL I E
Sbjct: 464 KELEVKYVASQNALNHLKSEMEQRLREKDE---ELENLRKSTTRTIEELTTTISEMEVRF 520
Query: 107 QNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIVEE 151
++ + ++KK+ + + EL++ + N+ LN+ K L Q V+E
Sbjct: 521 KSDMSRLKKKYEATISELEVQLDVANKANASLNRENKALAQRVQE 565
>sp|Q8EW01|SYS_MYCPE Serine--tRNA ligase OS=Mycoplasma penetrans (strain HF-2) GN=serS
PE=3 SV=1
Length = 426
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 74 IKELDQIIKELDLII----KESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTIK 129
+K+LD+ EL LII K+ N++ K + + I + + K+D++KKE++ + L+ T +
Sbjct: 30 LKDLDKKQSELLLIIESCNKKRNEISKSIGIYIGKKDNKKVDELKKEMESIKNTLETTNE 89
Query: 130 ELNQIIKELNQIIKELNQIVEE 151
EL I +++ I+ + I +
Sbjct: 90 ELKTISAKVDDILLSIPNIPDS 111
>sp|C4L425|DNAK_EXISA Chaperone protein DnaK OS=Exiguobacterium sp. (strain ATCC BAA-1283
/ AT1b) GN=dnaK PE=3 SV=1
Length = 608
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECK-VDFN-KLDQIKKELDQIIKELDQIIKELDLIIK 89
G+ +E I ++SS+GI+E E+E+ K + N + D +KE ++ E DQ++ D IK
Sbjct: 461 GTNKEQSITIQSSSGIDEAEIERMVKEAEANAEADNKRKEEAELRNETDQLVFATDKAIK 520
Query: 90 E 90
+
Sbjct: 521 D 521
>sp|Q9VJE5|CL190_DROME Restin homolog OS=Drosophila melanogaster GN=CLIP-190 PE=1 SV=1
Length = 1690
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 65/108 (60%), Gaps = 10/108 (9%)
Query: 49 EQEMEKECKVDFNKLDQIKKELDQI---IKELDQIIKELDLIIKESNQVIKELNLIIKES 105
EQ++++E + KL +I++ L ++ +K+ +++++ L+ ++ES+ +I+ N + ES
Sbjct: 1205 EQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVRESSSIIEAQNTKLNES 1264
Query: 106 N---QNKLDQIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIVE 150
N +NK +K+ DQ+++ + K+ Q+ +E ++ EL Q+ E
Sbjct: 1265 NVQLENKTSCLKETQDQLLE----SQKKEKQLQEEAAKLSGELQQVQE 1308
>sp|A7GT08|DNAK_BACCN Chaperone protein DnaK OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaK PE=3 SV=1
Length = 611
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 32 GSTEESEINLESSNGIEEQEMEKECK-VDFNK-LDQIKKELDQIIKELDQIIKELDLIIK 89
G+ +E I ++SS+G+ ++E+E+ K + N DQ +KE ++ E DQ++ + D ++K
Sbjct: 462 GTNKEQAITIQSSSGLSDEEVERMVKEAEANADADQKRKEEVELRNEADQLVFQTDKVVK 521
Query: 90 E 90
+
Sbjct: 522 D 522
>sp|Q96YR5|RAD50_SULTO DNA double-strand break repair Rad50 ATPase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=rad50 PE=3 SV=2
Length = 879
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 59 DFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQV--------IKELNLIIKESNQNKL 110
D N +Q +++L + E+ I+EL+ ++ NQV +EL+ K QN++
Sbjct: 400 DLNNKNQEREKLASQLGEIKGRIEELNKLLGNLNQVKGNVCPVCGRELSDDHKRKIQNEI 459
Query: 111 DQIKKELDQMVKELDLTIKELNQIIKELNQII 142
+ KELD++ K+ L I ++N +I ELNQII
Sbjct: 460 IEKLKELDELNKKFKLEINKINGLISELNQII 491
>sp|A2RUR9|C144A_HUMAN Coiled-coil domain-containing protein 144A OS=Homo sapiens
GN=CCDC144A PE=1 SV=1
Length = 1427
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 53 EKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQVIKELNLIIKESNQNKL-D 111
E+EC Q+K L +++KEL + LDL+++E N K+L+ +E + L D
Sbjct: 730 EEECGKVVETKQQLKWNLRRLVKELRTVRNNLDLVVQERNDAQKQLS---EEQDARILQD 786
Query: 112 QIKKELDQMVKELDLTIKELNQIIKELNQIIKEL 145
QI L KEL++ K++N I +Q K+L
Sbjct: 787 QI---LTSKQKELEMARKKMNSEISHRHQKEKDL 817
>sp|A1STE4|DNAK_PSYIN Chaperone protein DnaK OS=Psychromonas ingrahamii (strain 37)
GN=dnaK PE=3 SV=1
Length = 640
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 35 EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQV 94
+E +I ++SS+G+ E+E+EK D + K+ ++++K +Q D I+ + +
Sbjct: 494 QEQKITIKSSSGLSEEEVEKMVN-DAEANAEADKKFEEVVKARNQ----ADAIVHTTRKQ 548
Query: 95 IKELNLIIKESNQNKLDQIKKELDQMVKELD 125
I+E + + K++ KELD+ K D
Sbjct: 549 IEEAGDALPADEKEKIEAALKELDEATKGED 579
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 35 EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQIIKELDLIIKESNQV 94
EE + LE + G EQE K + ++ ++ E+D+ I+E ++ E D + +
Sbjct: 1535 EELQAALEEAEGALEQEEAKVMRAQL-EIATVRNEIDKRIQEKEE---EFDNTRRNHQRA 1590
Query: 95 IKELNLIIKESNQNKLD--QIKKELDQMVKELDLTIKELNQIIKELNQIIKELNQIVEE 151
++ + ++ + K D +IKK+L+Q + EL++ + N+ E+ + +K Q + E
Sbjct: 1591 LESMQASLEAEAKGKADAMRIKKKLEQDINELEVALDASNRGKAEMEKTVKRYQQQIRE 1649
>sp|B0V5U4|DNAK_ACIBY Chaperone protein DnaK OS=Acinetobacter baumannii (strain AYE)
GN=dnaK PE=3 SV=1
Length = 646
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTI 128
E D +I SN+ +K+L + E + ++ EL+ KE D+ +
Sbjct: 535 RNEADALISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDVEV 582
>sp|B7IBK5|DNAK_ACIB5 Chaperone protein DnaK OS=Acinetobacter baumannii (strain AB0057)
GN=dnaK PE=3 SV=1
Length = 646
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTI 128
E D +I SN+ +K+L + E + ++ EL+ KE D+ +
Sbjct: 535 RNEADALISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDVEV 582
>sp|B7H317|DNAK_ACIB3 Chaperone protein DnaK OS=Acinetobacter baumannii (strain
AB307-0294) GN=dnaK PE=3 SV=1
Length = 646
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDLTI 128
E D +I SN+ +K+L + E + ++ EL+ KE D+ +
Sbjct: 535 RNEADALISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDVEV 582
>sp|P41003|SMC2_SCHPO Structural maintenance of chromosomes protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut14 PE=1 SV=2
Length = 1172
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 74 IKELDQIIKELDLIIKESNQVIKELNLIIKESNQN---KLDQIKKELDQMVKELD 125
+K+L Q + ELD +I +S+Q IK++ ++E N K+ +++KE +Q +LD
Sbjct: 753 VKDLKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLD 807
>sp|A3M8W9|DNAK_ACIBT Chaperone protein DnaK OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=dnaK PE=3 SV=2
Length = 646
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDL 126
E D +I SN+ +K+L + E + ++ EL+ KE D+
Sbjct: 535 RNEADALISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDV 580
>sp|B2HZZ7|DNAK_ACIBC Chaperone protein DnaK OS=Acinetobacter baumannii (strain ACICU)
GN=dnaK PE=3 SV=1
Length = 646
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 24 DGLTPVT--DGST-EESEINLESSNGIEEQEMEKECKVDFNKLDQIKKELDQIIKELDQI 80
DG+ V+ D ST +E I +++++G+ + E+E K + E D+ +EL +
Sbjct: 480 DGILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDA-----EANAEEDRKFEELAKA 534
Query: 81 IKELDLIIKESNQVIKELNLIIKESNQNKLDQIKKELDQMVKELDL 126
E D +I SN+ +K+L + E + ++ EL+ KE D+
Sbjct: 535 RNEADALISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDV 580
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,652,677
Number of Sequences: 539616
Number of extensions: 2198334
Number of successful extensions: 27482
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 2139
Number of HSP's that attempted gapping in prelim test: 20533
Number of HSP's gapped (non-prelim): 6989
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)