Query psy18026
Match_columns 246
No_of_seqs 258 out of 1371
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 20:36:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cbz_A Dishevelled-2; PDZ doma 99.7 8.9E-18 3E-22 128.8 11.0 98 34-131 4-101 (108)
2 3gge_A PDZ domain-containing p 99.7 9.3E-17 3.2E-21 121.0 12.3 85 34-124 4-88 (95)
3 1r6j_A Syntenin 1; PDZ, membra 99.7 1.8E-16 6.1E-21 116.5 11.2 78 34-124 3-80 (82)
4 1wi4_A Synip, syntaxin binding 99.7 7.8E-16 2.7E-20 118.3 13.5 90 34-125 14-104 (109)
5 3b76_A E3 ubiquitin-protein li 99.7 6.1E-16 2.1E-20 120.7 13.0 88 35-125 24-112 (118)
6 1i16_A Interleukin 16, LCF; cy 99.7 1.5E-15 5.2E-20 120.1 13.4 90 32-125 26-117 (130)
7 2d92_A INAD-like protein; PDZ 99.7 1.7E-15 5.8E-20 115.8 13.0 91 32-125 12-104 (108)
8 2vwr_A Ligand of NUMB protein 99.6 3E-15 1E-19 111.5 13.4 86 34-125 2-88 (95)
9 1v62_A KIAA1719 protein; struc 99.6 3.1E-15 1E-19 116.2 13.5 88 34-125 14-101 (117)
10 2qg1_A Multiple PDZ domain pro 99.6 2.2E-15 7.6E-20 111.4 12.1 86 34-125 3-88 (92)
11 2dmz_A INAD-like protein; PDZ 99.6 7.6E-15 2.6E-19 115.4 15.6 97 27-126 7-106 (129)
12 2ehr_A INAD-like protein; PDZ 99.6 3E-15 1E-19 115.8 13.0 95 28-125 8-109 (117)
13 2awx_A Synapse associated prot 99.6 3.3E-15 1.1E-19 113.5 12.5 88 34-125 2-92 (105)
14 2fe5_A Presynaptic protein SAP 99.6 3.5E-15 1.2E-19 110.6 12.3 88 33-124 1-91 (94)
15 2i1n_A Discs, large homolog 3; 99.6 7.9E-15 2.7E-19 110.6 14.1 90 34-127 3-95 (102)
16 2iwo_A Multiple PDZ domain pro 99.6 1E-15 3.5E-20 119.6 9.3 89 34-125 23-112 (120)
17 1wha_A KIAA0147 protein, scrib 99.6 3.6E-15 1.2E-19 113.3 12.1 94 30-127 2-99 (105)
18 2db5_A INAD-like protein; PDZ 99.6 3.2E-15 1.1E-19 117.5 12.0 89 34-125 24-114 (128)
19 2dlu_A INAD-like protein; PDZ 99.6 9.6E-15 3.3E-19 111.8 14.3 96 22-125 2-97 (111)
20 2byg_A Channel associated prot 99.6 5E-15 1.7E-19 115.1 12.7 88 34-125 23-113 (117)
21 1ueq_A Membrane associated gua 99.6 2.5E-14 8.6E-19 111.8 16.4 92 30-125 14-105 (123)
22 1kwa_A Hcask/LIN-2 protein; PD 99.6 4E-15 1.4E-19 109.9 11.2 82 36-124 2-83 (88)
23 2dc2_A GOPC, golgi associated 99.6 3.3E-15 1.1E-19 113.4 11.0 88 34-126 8-95 (103)
24 1wf8_A Neurabin-I; PDZ domain, 99.6 6.5E-15 2.2E-19 112.2 12.6 91 33-127 7-101 (107)
25 1wi2_A Riken cDNA 2700099C19; 99.6 1.1E-14 3.9E-19 110.4 13.8 95 24-125 4-98 (104)
26 2la8_A Inactivation-NO-after-p 99.6 5.5E-15 1.9E-19 113.1 11.8 83 35-125 2-84 (106)
27 1d5g_A Human phosphatase HPTP1 99.6 1E-14 3.6E-19 108.6 13.0 88 34-125 4-92 (96)
28 3egg_C Spinophilin; PP1, serin 99.6 4.9E-15 1.7E-19 122.8 12.2 87 34-124 79-169 (170)
29 1x6d_A Interleukin-16; PDZ dom 99.6 1.1E-14 3.6E-19 113.0 13.1 88 34-125 14-102 (119)
30 1uhp_A Hypothetical protein KI 99.6 1.6E-14 5.4E-19 110.0 13.4 89 33-125 6-100 (107)
31 1uju_A Scribble; PDZ domain, c 99.6 1.8E-15 6.1E-20 116.0 8.0 93 35-130 9-108 (111)
32 3o46_A Maguk P55 subfamily mem 99.6 9.6E-15 3.3E-19 108.4 11.6 85 34-125 3-87 (93)
33 3nfk_A Tyrosine-protein phosph 99.6 4.2E-15 1.4E-19 113.0 9.9 89 34-124 16-106 (107)
34 2jil_A GRIP1 protein, glutamat 99.6 1.2E-14 4.2E-19 108.4 12.2 89 34-126 2-92 (97)
35 1qav_A Alpha-1 syntrophin (res 99.6 7.3E-15 2.5E-19 108.3 10.8 86 34-124 3-88 (90)
36 1uep_A Membrane associated gua 99.6 6.5E-15 2.2E-19 111.5 10.8 92 32-127 6-97 (103)
37 2jik_A Synaptojanin-2 binding 99.6 2E-14 6.9E-19 108.1 13.3 88 34-125 6-96 (101)
38 4e34_A Golgi-associated PDZ an 99.6 7.1E-15 2.4E-19 107.6 10.4 85 35-124 2-86 (87)
39 3hpk_A Protein interacting wit 99.6 1.6E-14 5.5E-19 113.0 12.9 87 34-125 18-104 (125)
40 1wg6_A Hypothetical protein (r 99.6 8E-15 2.7E-19 115.5 11.1 94 34-127 24-123 (127)
41 2cs5_A Tyrosine-protein phosph 99.6 5.6E-15 1.9E-19 114.6 9.5 101 23-125 3-105 (119)
42 2csj_A TJP2 protein; PDZ domai 99.6 1.4E-14 4.7E-19 112.2 11.6 89 32-125 11-103 (117)
43 2fne_A Multiple PDZ domain pro 99.6 6.3E-15 2.2E-19 114.6 9.7 88 34-125 24-112 (117)
44 4amh_A Disks large homolog 1; 99.6 1E-14 3.5E-19 111.3 10.6 83 40-125 6-91 (106)
45 1wfg_A Regulating synaptic mem 99.6 1.8E-14 6E-19 114.2 12.3 91 34-125 26-126 (131)
46 3l4f_D SH3 and multiple ankyri 99.6 1.5E-14 5.3E-19 114.7 12.0 88 34-125 26-123 (132)
47 2eno_A Synaptojanin-2-binding 99.6 4.2E-14 1.4E-18 109.9 14.2 88 34-125 16-106 (120)
48 1n7e_A AMPA receptor interacti 99.6 4E-14 1.4E-18 105.8 13.4 88 34-127 4-91 (97)
49 1ujd_A KIAA0559 protein; PDZ d 99.6 2E-14 6.8E-19 111.4 11.8 89 34-125 11-108 (117)
50 3axa_A Afadin, nectin-3, prote 99.6 1.7E-14 5.8E-19 109.6 11.2 89 32-125 8-97 (106)
51 2q9v_A Membrane-associated gua 99.6 1.9E-14 6.5E-19 105.9 11.0 86 35-124 2-87 (90)
52 2o2t_A Multiple PDZ domain pro 99.6 8.9E-15 3E-19 113.0 9.6 89 34-125 19-109 (117)
53 2yt7_A Amyloid beta A4 precurs 99.6 3.4E-14 1.2E-18 107.2 12.5 91 34-125 8-98 (101)
54 1ufx_A KIAA1526 protein; PDZ d 99.6 2E-14 6.7E-19 109.4 11.1 88 36-125 7-96 (103)
55 1um1_A KIAA1849 protein, RSGI 99.6 4.3E-14 1.5E-18 108.0 13.0 88 34-125 7-95 (110)
56 1m5z_A GRIP, AMPA receptor int 99.6 5.3E-14 1.8E-18 103.7 12.9 84 34-124 5-89 (91)
57 2kpk_A Membrane-associated gua 99.6 1.2E-13 4E-18 108.9 15.6 91 31-125 14-104 (129)
58 3i4w_A Disks large homolog 4; 99.6 3.8E-14 1.3E-18 106.9 12.1 87 31-124 7-93 (104)
59 2djt_A Unnamed protein product 99.6 3.4E-14 1.2E-18 107.4 11.9 89 33-125 9-97 (104)
60 1x5q_A LAP4 protein; PDZ domai 99.6 1E-13 3.5E-18 105.9 14.6 99 22-125 2-104 (110)
61 1ihj_A INAD; intermolecular di 99.6 2.6E-14 8.9E-19 106.8 10.8 87 35-124 5-95 (98)
62 2dkr_A LIN-7 homolog B; LIN-7B 99.6 3.6E-14 1.2E-18 104.9 11.4 85 34-124 4-88 (93)
63 2ejy_A 55 kDa erythrocyte memb 99.6 2.5E-14 8.5E-19 108.0 10.7 82 36-124 13-94 (97)
64 2jre_A C60-1 PDZ domain peptid 99.6 6.5E-14 2.2E-18 106.5 13.0 90 33-125 10-103 (108)
65 1va8_A Maguk P55 subfamily mem 99.6 8.6E-14 2.9E-18 107.2 13.7 84 34-125 24-107 (113)
66 2daz_A INAD-like protein; PDZ 99.6 4.5E-14 1.5E-18 110.4 12.3 87 34-125 24-110 (124)
67 1nf3_C PAR-6B; semi-CRIB motif 99.6 1.4E-14 4.7E-19 114.1 9.4 91 32-125 26-124 (128)
68 2qkv_A Inactivation-NO-after-p 99.6 3.1E-14 1E-18 106.5 10.8 85 33-125 6-90 (96)
69 2ego_A General receptor for ph 99.6 4.5E-14 1.5E-18 105.4 11.6 87 34-124 3-94 (96)
70 1q7x_A PDZ2B domain of PTP-BAS 99.5 3.7E-14 1.3E-18 108.0 11.2 89 34-126 8-102 (108)
71 2g5m_B Neurabin-2; spinophilin 99.5 2.6E-14 9E-19 109.7 10.5 88 34-125 3-94 (113)
72 1uew_A Membrane associated gua 99.5 8.8E-14 3E-18 107.1 13.4 92 30-125 5-102 (114)
73 2i04_A Membrane-associated gua 99.5 7.4E-14 2.5E-18 101.7 12.1 84 37-124 2-85 (85)
74 2h2b_A Tight junction protein 99.5 1E-13 3.5E-18 105.3 12.9 91 30-125 2-96 (107)
75 1g9o_A NHE-RF; PDZ domain, com 99.5 8.1E-14 2.8E-18 102.7 12.0 82 35-124 3-84 (91)
76 2opg_A Multiple PDZ domain pro 99.5 1.4E-13 4.9E-18 102.7 13.5 86 35-125 4-89 (98)
77 2he4_A Na(+)/H(+) exchange reg 99.5 8.1E-14 2.8E-18 102.6 11.5 82 35-124 4-85 (90)
78 2r4h_A Membrane-associated gua 99.5 8.6E-14 2.9E-18 107.0 11.9 85 34-124 23-107 (112)
79 1z87_A Alpha-1-syntrophin; pro 99.5 6E-14 2E-18 123.8 12.4 87 34-125 76-162 (263)
80 2uzc_A Human pdlim5, PDZ and L 99.5 5.7E-14 1.9E-18 102.9 10.3 83 34-124 2-84 (88)
81 2q3g_A PDZ and LIM domain prot 99.5 7.8E-14 2.7E-18 102.5 11.0 84 34-125 2-85 (89)
82 1wfv_A Membrane associated gua 99.5 2.2E-14 7.6E-19 108.0 8.2 86 34-125 10-95 (103)
83 2f5y_A Regulator of G-protein 99.5 1.2E-13 4E-18 102.2 12.0 81 34-125 2-82 (91)
84 2pa1_A PDZ and LIM domain prot 99.5 8.6E-14 2.9E-18 101.9 10.9 82 38-125 3-84 (87)
85 1q3o_A Shank1; PDZ, GKAP, pept 99.5 1.6E-13 5.6E-18 104.7 12.7 87 35-125 7-103 (109)
86 1um7_A Synapse-associated prot 99.5 3.7E-14 1.3E-18 108.5 9.0 95 23-124 3-97 (113)
87 2fcf_A Multiple PDZ domain pro 99.5 1.2E-13 4.3E-18 104.0 11.6 89 34-125 3-98 (103)
88 2koj_A Partitioning defective 99.5 6.6E-13 2.3E-17 101.4 15.3 90 34-125 10-100 (111)
89 3qe1_A Sorting nexin-27, G pro 99.5 3.2E-13 1.1E-17 102.5 13.1 86 35-125 6-101 (107)
90 1v6b_A Harmonin isoform A1; st 99.5 1.9E-13 6.4E-18 106.2 11.5 88 35-125 18-106 (118)
91 2v90_A PDZ domain-containing p 99.5 1.8E-13 6E-18 102.0 10.9 87 34-125 2-88 (96)
92 1v5q_A GRIP1 homolog, glutamat 99.5 4.3E-13 1.5E-17 104.6 13.5 95 30-125 10-106 (122)
93 3e17_A Tight junction protein 99.5 1.8E-13 6.3E-18 100.9 10.8 77 37-124 2-79 (88)
94 2e7k_A Maguk P55 subfamily mem 99.5 6.6E-14 2.3E-18 103.9 8.2 82 35-125 6-87 (91)
95 3ngh_A PDZ domain-containing p 99.5 1.9E-13 6.4E-18 103.6 10.9 81 37-124 3-83 (106)
96 1mfg_A ERB-B2 interacting prot 99.5 2.8E-13 9.7E-18 100.6 11.7 83 36-125 4-92 (95)
97 3gsl_A Disks large homolog 4; 99.5 3.3E-13 1.1E-17 111.7 13.0 91 32-126 2-95 (196)
98 2edz_A PDZ domain-containing p 99.5 2.7E-13 9.1E-18 104.4 11.5 90 28-124 6-95 (114)
99 2w4f_A Protein LAP4; structura 99.5 5.7E-13 1.9E-17 99.2 12.9 87 34-125 2-92 (97)
100 3soe_A Membrane-associated gua 99.5 4.3E-13 1.5E-17 104.1 12.4 84 34-127 11-94 (113)
101 2d90_A PDZ domain containing p 99.5 4E-13 1.4E-17 101.2 11.6 84 34-125 5-88 (102)
102 2gzv_A PRKCA-binding protein; 99.5 4.6E-13 1.6E-17 103.5 12.2 85 35-124 24-108 (114)
103 1n7t_A 99-MER peptide of densi 99.5 2.1E-13 7.1E-18 103.0 9.8 87 32-125 8-100 (103)
104 2iwn_A Multiple PDZ domain pro 99.5 6.5E-13 2.2E-17 98.5 12.4 88 34-125 3-92 (97)
105 3r68_A Na(+)/H(+) exchange reg 99.5 2.9E-13 1E-17 100.4 10.4 82 35-124 5-86 (95)
106 2z17_A Pleckstrin homology SEC 99.5 2.2E-13 7.5E-18 103.1 9.7 85 34-122 14-103 (104)
107 1qau_A Neuronal nitric oxide s 99.5 7.3E-13 2.5E-17 101.3 12.7 86 35-125 1-86 (112)
108 2vsp_A PDZ domain-containing p 99.5 1.2E-13 4E-18 102.0 7.8 83 35-125 3-85 (91)
109 2iwq_A Multiple PDZ domain pro 99.5 4.6E-13 1.6E-17 104.9 11.6 87 35-124 24-117 (123)
110 1rgw_A ZAsp protein; PDZ, cyph 99.5 2.8E-13 9.6E-18 98.4 9.5 81 36-124 2-82 (85)
111 1tp5_A Presynaptic density pro 99.5 5E-13 1.7E-17 103.4 11.4 85 33-124 12-96 (119)
112 2eei_A PDZ domain-containing p 99.5 3.6E-13 1.2E-17 102.0 10.0 84 34-125 7-90 (106)
113 2kom_A Partitioning defective 99.4 2.2E-12 7.5E-17 100.6 14.3 98 21-124 20-118 (121)
114 3bpu_A Membrane-associated gua 99.4 8.6E-13 2.9E-17 96.7 11.1 84 34-125 2-85 (88)
115 2eeh_A PDZ domain-containing p 99.4 1.6E-12 5.5E-17 97.6 12.8 87 32-125 7-93 (100)
116 2dm8_A INAD-like protein; PDZ 99.4 8.6E-13 2.9E-17 101.5 11.5 86 35-125 17-102 (116)
117 2eeg_A PDZ and LIM domain prot 99.4 5.4E-13 1.9E-17 99.1 10.0 84 34-125 7-90 (94)
118 2kv8_A RGS12, regulator of G-p 99.4 1.5E-13 5.1E-18 99.7 6.7 79 35-124 2-80 (83)
119 2jxo_A Ezrin-radixin-moesin-bi 99.4 9.8E-13 3.3E-17 98.3 11.1 83 34-124 8-91 (98)
120 1whd_A RGS3, regulator of G-pr 99.4 5.6E-13 1.9E-17 100.3 9.7 83 34-127 14-96 (100)
121 1vb7_A PDZ and LIM domain 2; P 99.4 2.8E-13 9.4E-18 100.7 7.5 82 38-125 7-88 (94)
122 2pkt_A PDZ and LIM domain prot 99.4 1.1E-12 3.8E-17 96.7 10.7 82 36-125 4-85 (91)
123 2dls_A PDZ-rhogef, RHO guanine 99.4 2.4E-12 8.4E-17 95.5 12.5 80 34-125 7-86 (93)
124 1wf7_A Enigma homologue protei 99.4 4.3E-13 1.5E-17 101.3 8.3 84 34-125 4-87 (103)
125 3kzd_A TIAM-1, T-lymphoma inva 99.4 2.8E-12 9.4E-17 96.4 12.3 87 31-124 2-90 (94)
126 2edp_A Fragment, shroom family 99.4 3.9E-13 1.3E-17 101.2 7.5 84 34-125 10-93 (100)
127 3sfj_A TAX1-binding protein 3; 99.4 2.1E-12 7.1E-17 97.4 11.2 75 47-124 19-103 (104)
128 3r0h_A INAD, inactivation-NO-a 99.4 3.3E-12 1.1E-16 107.1 13.6 87 35-125 18-107 (206)
129 2edv_A FERM and PDZ domain-con 99.4 5.4E-13 1.9E-17 99.8 7.8 82 34-126 7-89 (96)
130 3k1r_A Harmonin; protein-prote 99.4 1.1E-12 3.7E-17 110.0 10.3 85 34-125 83-167 (192)
131 2lob_A Golgi-associated PDZ an 99.1 3.2E-14 1.1E-18 109.9 0.0 88 31-123 23-110 (112)
132 1x5n_A Harmonin; PDZ domain, u 99.4 4E-12 1.4E-16 97.5 11.5 84 34-124 14-97 (114)
133 1wif_A RSGI RUH-020, riken cDN 99.4 2.7E-12 9.2E-17 101.3 10.3 84 35-125 27-110 (126)
134 2vsv_A Rhophilin-2; scaffold p 99.4 3.9E-12 1.3E-16 97.9 10.6 81 35-126 23-104 (109)
135 3khf_A Microtubule-associated 99.4 3.5E-12 1.2E-16 95.4 10.0 83 38-125 5-92 (99)
136 2kjd_A Sodium/hydrogen exchang 99.4 5.9E-12 2E-16 98.4 11.7 85 32-124 6-91 (128)
137 1ujv_A Membrane associated gua 99.4 9.8E-12 3.4E-16 93.0 12.3 84 34-127 9-92 (96)
138 2xkx_A Disks large homolog 4; 99.4 4.1E-12 1.4E-16 126.0 13.0 92 31-126 55-149 (721)
139 2qt5_A Glutamate receptor-inte 99.4 6.7E-12 2.3E-16 105.1 12.4 87 35-126 7-93 (200)
140 1b8q_A Protein (neuronal nitri 99.3 2.1E-12 7E-17 101.1 8.3 87 34-125 7-93 (127)
141 1p1d_A PDZ45, glutamate recept 99.3 6.8E-12 2.3E-16 104.9 11.8 93 33-126 4-98 (196)
142 3r0h_A INAD, inactivation-NO-a 99.3 5.1E-12 1.8E-16 105.9 10.6 83 35-125 113-195 (206)
143 2qbw_A PDZ-fibronectin fusion 99.3 6.4E-12 2.2E-16 104.6 10.9 74 47-125 2-81 (195)
144 1uez_A KIAA1526 protein; PDZ d 99.3 4.6E-12 1.6E-16 95.2 9.1 83 35-124 8-91 (101)
145 3gsl_A Disks large homolog 4; 99.3 1E-11 3.5E-16 102.6 11.8 87 35-125 100-189 (196)
146 2d8i_A T-cell lymphoma invasio 99.3 1.5E-11 5.2E-16 95.2 11.4 85 34-125 14-100 (114)
147 2vz5_A TAX1-binding protein 3; 99.3 1.4E-11 4.8E-16 98.4 11.0 93 30-125 18-123 (139)
148 1uit_A Human discs large 5 pro 99.3 2E-11 7E-16 94.1 10.8 81 35-124 19-99 (117)
149 2yuy_A RHO GTPase activating p 99.3 2.5E-12 8.4E-17 100.8 5.0 86 35-125 8-119 (126)
150 1y7n_A Amyloid beta A4 precurs 99.3 4.2E-11 1.4E-15 88.8 11.3 69 43-124 20-88 (90)
151 1uf1_A KIAA1526 protein; PDZ d 99.3 5.4E-11 1.8E-15 93.2 11.7 84 35-125 20-103 (128)
152 3shw_A Tight junction protein 99.3 2.2E-11 7.5E-16 115.3 11.2 81 36-124 2-82 (468)
153 3tsv_A Tight junction protein 99.3 3.1E-11 1.1E-15 94.6 10.0 73 46-124 38-110 (124)
154 2eaq_A LIM domain only protein 99.2 6.9E-11 2.4E-15 86.6 11.2 83 35-124 3-87 (90)
155 1v5l_A PDZ and LIM domain 3; a 99.2 2.7E-12 9.3E-17 96.9 3.5 81 37-125 7-87 (103)
156 1wh1_A KIAA1095 protein; PDZ d 99.2 8E-11 2.7E-15 91.8 11.8 90 32-125 16-106 (124)
157 2krg_A Na(+)/H(+) exchange reg 99.2 1.4E-10 4.9E-15 99.3 12.9 83 34-124 8-91 (216)
158 2rcz_A Tight junction protein 99.2 1.4E-10 4.9E-15 82.8 10.7 74 40-124 6-79 (81)
159 3cyy_A Tight junction protein 99.2 1.7E-10 5.8E-15 84.6 11.1 78 36-124 3-81 (92)
160 1fsh_A Dishevelled-1; three-he 99.2 3.7E-12 1.3E-16 97.6 1.7 59 181-241 2-60 (105)
161 1w9e_A Syntenin 1; cell adhesi 99.2 1.9E-10 6.5E-15 93.8 11.5 82 34-124 3-85 (166)
162 1vae_A Rhophilin 2, rhophilin, 99.2 2.4E-11 8.1E-16 93.6 5.7 79 36-125 16-95 (111)
163 3tsz_A Tight junction protein 99.2 1.2E-10 4.2E-15 107.9 11.3 82 35-124 9-90 (391)
164 3qik_A Phosphatidylinositol 3, 99.2 1.8E-10 6.2E-15 87.4 10.0 81 37-124 19-99 (101)
165 3suz_A Amyloid beta A4 precurs 99.2 2E-11 7E-16 112.9 5.8 91 34-125 203-293 (388)
166 2qt5_A Glutamate receptor-inte 99.1 3.9E-10 1.3E-14 94.3 12.0 87 35-125 106-194 (200)
167 2yub_A LIMK-2, LIM domain kina 99.1 5.8E-10 2E-14 86.7 11.9 94 28-125 5-104 (118)
168 2xkx_A Disks large homolog 4; 99.1 2.1E-10 7.2E-15 113.7 11.7 84 35-125 307-390 (721)
169 1p1d_A PDZ45, glutamate recept 99.1 5.2E-10 1.8E-14 93.4 11.7 86 37-125 109-194 (196)
170 1w9e_A Syntenin 1; cell adhesi 98.5 9.9E-07 3.4E-11 71.5 11.4 76 36-124 89-164 (166)
171 1fc6_A Photosystem II D1 prote 98.5 4.4E-07 1.5E-11 83.5 10.3 74 46-125 84-158 (388)
172 3suz_A Amyloid beta A4 precurs 98.5 1.5E-08 5.1E-13 93.7 0.0 66 46-124 307-372 (388)
173 3i18_A LMO2051 protein; alpha- 98.4 1.6E-06 5.4E-11 64.7 8.9 58 62-124 6-63 (100)
174 2pzd_A Serine protease HTRA2; 98.4 1.7E-06 5.8E-11 65.7 9.1 56 62-124 34-89 (113)
175 2kl1_A YLBL protein; structure 98.4 7.5E-07 2.6E-11 65.9 6.8 59 62-125 4-62 (94)
176 2pbi_A Regulator of G-protein 98.3 9.1E-08 3.1E-12 89.4 1.3 50 191-241 12-61 (424)
177 2kjp_A Uncharacterized protein 98.3 3.4E-07 1.1E-11 67.7 3.3 57 64-125 2-58 (91)
178 2p3w_A Probable serine proteas 98.3 3.4E-06 1.2E-10 63.9 8.6 56 62-124 34-89 (112)
179 2l97_A HTRA, putative serine p 98.2 3.8E-06 1.3E-10 66.1 8.5 58 62-124 56-113 (134)
180 3rle_A Golgi reassembly-stacki 98.2 2.4E-06 8.3E-11 72.0 7.6 61 61-125 14-75 (209)
181 3id1_A Regulator of sigma E pr 98.2 3.9E-06 1.3E-10 62.2 7.7 56 66-125 5-60 (95)
182 2zpm_A Regulator of sigma E pr 98.2 2.5E-06 8.7E-11 62.0 6.4 57 63-124 4-60 (91)
183 2i6v_A General secretion pathw 98.2 4.1E-06 1.4E-10 60.8 6.5 59 63-125 19-77 (87)
184 3k50_A Putative S41 protease; 98.1 2.8E-06 9.7E-11 78.9 5.7 73 46-125 73-145 (403)
185 3rle_A Golgi reassembly-stacki 98.1 8.6E-06 2.9E-10 68.6 7.9 73 47-125 95-169 (209)
186 1y8t_A Hypothetical protein RV 98.1 1.4E-05 4.8E-10 71.4 9.8 70 48-124 230-299 (324)
187 1te0_A Protease DEGS; two doma 98.0 2.1E-05 7.2E-10 70.3 9.9 60 62-125 243-302 (318)
188 4a8c_A Periplasmic PH-dependen 98.0 1.7E-05 5.7E-10 74.1 8.7 58 62-125 362-419 (436)
189 4fgm_A Aminopeptidase N family 98.0 1.3E-05 4.3E-10 78.0 7.8 69 47-125 485-553 (597)
190 3stj_A Protease DEGQ; serine p 97.9 2.9E-05 9.8E-10 70.5 8.6 60 62-125 262-321 (345)
191 2hga_A Conserved protein MTH13 97.9 4.2E-05 1.4E-09 59.6 8.2 57 62-124 24-80 (125)
192 4a8c_A Periplasmic PH-dependen 97.9 2E-05 7E-10 73.5 7.6 60 62-125 262-321 (436)
193 2i4s_A General secretion pathw 97.9 2E-05 6.8E-10 59.2 6.1 58 64-125 38-95 (105)
194 3pv2_A DEGQ; trypsin fold, PDZ 97.8 5.5E-05 1.9E-09 71.0 9.5 59 63-125 282-340 (451)
195 3pv2_A DEGQ; trypsin fold, PDZ 97.8 2.7E-05 9.2E-10 73.1 7.3 57 63-125 386-442 (451)
196 1lcy_A HTRA2 serine protease; 97.8 6E-05 2E-09 67.6 8.7 57 62-125 255-311 (325)
197 3qo6_A Protease DO-like 1, chl 97.8 5.2E-05 1.8E-09 68.6 7.9 59 63-125 251-320 (348)
198 2cso_A Pleckstrin; DEP domain, 97.8 6.7E-06 2.3E-10 64.6 1.5 50 192-242 9-58 (127)
199 1uhw_A Pleckstrin; three-helix 97.7 5.7E-06 2E-10 63.3 0.6 43 198-241 5-47 (109)
200 1v3f_A Pleckstrin 2; three-hel 97.7 1.1E-05 3.8E-10 62.8 1.6 44 198-242 5-48 (120)
201 1k32_A Tricorn protease; prote 97.6 0.00016 5.5E-09 73.3 9.0 71 45-125 735-814 (1045)
202 1ky9_A Protease DO, DEGP, HTRA 97.6 1.1E-05 3.7E-10 75.8 0.0 68 49-125 372-439 (448)
203 3num_A Serine protease HTRA1; 97.3 3.9E-05 1.3E-09 68.9 0.0 57 62-125 253-309 (332)
204 1ky9_A Protease DO, DEGP, HTRA 97.2 0.00016 5.6E-09 67.7 3.7 59 63-125 286-344 (448)
205 4fln_A Protease DO-like 2, chl 96.6 0.0045 1.5E-07 59.4 7.9 61 62-125 276-344 (539)
206 4fln_A Protease DO-like 2, chl 95.9 0.02 6.7E-07 54.9 8.1 58 61-123 413-470 (539)
207 2ysr_A DEP domain-containing p 89.7 0.064 2.2E-06 40.3 0.0 37 201-241 14-50 (105)
208 3dor_A Protein CT_858, CPAF; m 55.8 11 0.00039 36.2 4.6 42 48-98 85-126 (583)
209 3on7_A Oxidoreductase, iron/as 38.0 4.4 0.00015 35.0 -1.2 39 195-233 171-212 (280)
210 3oox_A Putative 2OG-Fe(II) oxy 35.6 5.3 0.00018 34.9 -1.1 40 194-233 187-229 (312)
211 3bbo_O Ribosomal protein L16; 31.6 33 0.0011 26.5 3.0 35 73-112 88-122 (135)
212 1odm_A Isopenicillin N synthas 31.1 4.9 0.00017 35.5 -2.1 39 194-233 210-251 (331)
213 1ffk_F Ribosomal protein L10E; 30.1 39 0.0013 26.8 3.3 46 73-123 106-152 (157)
214 2pa2_A 60S ribosomal protein L 27.2 35 0.0012 27.0 2.5 49 73-124 89-138 (151)
215 2ftc_I Mitochondrial ribosomal 25.2 41 0.0014 25.3 2.5 36 73-112 75-110 (118)
216 3m3h_A OPRT, oprtase, orotate 24.4 80 0.0027 26.4 4.4 33 79-111 131-163 (234)
217 3r8s_M 50S ribosomal protein L 24.3 26 0.00089 27.2 1.2 32 77-113 91-122 (136)
218 3dez_A OPRT, oprtase, orotate 22.7 90 0.0031 26.2 4.4 33 79-111 143-175 (243)
219 3uaf_A TTR-52; beta barrel/san 21.3 37 0.0013 25.5 1.5 21 213-234 79-99 (117)
220 2wns_A Orotate phosphoribosylt 20.7 89 0.003 25.1 3.9 33 80-112 106-138 (205)
221 1a62_A RHO; transcription term 20.5 1.2E+02 0.0039 23.1 4.2 38 47-89 60-98 (130)
222 1gp6_A Leucoanthocyanidin diox 20.4 13 0.00045 33.1 -1.4 39 194-232 228-268 (356)
No 1
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.75 E-value=8.9e-18 Score=128.82 Aligned_cols=98 Identities=77% Similarity=1.161 Sum_probs=84.9
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|+|.++...+|||++.++.+.....++||.+|.+||+|+++|+|++||+|++|||+++.+++|++++++|+.+.+
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 57889999987778999999998654457899999999999999999999999999999999999999999999998743
Q ss_pred CCCcEEEEEEecCCCCCC
Q psy18026 114 KPGPIKLVVAKCWDPNPK 131 (246)
Q Consensus 114 ~~~~V~L~V~r~~~~~~~ 131 (246)
+.+.|.|+|.|..++.+.
T Consensus 84 ~~~~v~l~v~R~~~~~~~ 101 (108)
T 3cbz_A 84 KPGPIVLTVAKSGGGSGN 101 (108)
T ss_dssp SSSCEEEEEECCCC-CCC
T ss_pred CCCeEEEEEEeCCCCCcc
Confidence 245799999997666543
No 2
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.71 E-value=9.3e-17 Score=120.99 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=75.0
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
-+.++|+|.|.. ++|||+|.++ +.+.+||.+|.+||+|+++|+|++||+|++|||+++.+++|+|++++|+++..
T Consensus 4 g~~k~V~l~K~~-~~LG~tI~~~----g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 4 GIEKEVNVYKSE-DSLGLTITDN----GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEEECCS-SCCCEEEECS----SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CeEEEEEEEECC-CCceEEEEcC----CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 367889999875 8999999963 36789999999999999999999999999999999999999999999999832
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
+..++|++.+
T Consensus 79 -g~~~~L~lv~ 88 (95)
T 3gge_A 79 -EELFTMKLIE 88 (95)
T ss_dssp -TCEEEEEEEE
T ss_pred -CCEEEEEEEC
Confidence 3358888886
No 3
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.69 E-value=1.8e-16 Score=116.48 Aligned_cols=78 Identities=17% Similarity=0.296 Sum_probs=70.8
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+..+|+|.|+..++|||++.++ +|.++.+||||+++| |++||+|++|||+++.+++|++++++||.+
T Consensus 3 ~~~r~v~l~k~~~g~~Gf~i~~g---------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~-- 70 (82)
T 1r6j_A 3 MDPRTITMHKDSTGHVGFIFKNG---------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS-- 70 (82)
T ss_dssp TCCEEEEEECCTTSCCCEEEETT---------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS--
T ss_pred CceEEEEEEECCCCCeEEEEECC---------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC--
Confidence 34678999999878899999863 489999999999999 999999999999999999999999999977
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
++.|+|+|..
T Consensus 71 -g~~V~L~v~p 80 (82)
T 1r6j_A 71 -GTVVTITIMP 80 (82)
T ss_dssp -CSEEEEEEEE
T ss_pred -CCEEEEEEEe
Confidence 7779999985
No 4
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.68 E-value=7.8e-16 Score=118.26 Aligned_cols=90 Identities=22% Similarity=0.455 Sum_probs=76.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++.+|+|.++ .+|||+|.|+.+.....++||..|.++|+|+++|+|++||+|++|||+++.+++|++++++|+.+..
T Consensus 14 ~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 14 PAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp TTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred CcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 45777888774 7899999998764345589999999999999999999999999999999999999999999999831
Q ss_pred CCC-cEEEEEEec
Q psy18026 114 KPG-PIKLVVAKC 125 (246)
Q Consensus 114 ~~~-~V~L~V~r~ 125 (246)
+.+ .++|.+.|.
T Consensus 92 r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 92 RSESPWEIAFIRS 104 (109)
T ss_dssp SSSSCEEEEEECC
T ss_pred CCCceEEEEEEeC
Confidence 113 488888874
No 5
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.67 E-value=6.1e-16 Score=120.73 Aligned_cols=88 Identities=31% Similarity=0.508 Sum_probs=79.3
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
+..+|.|.++...+|||+|.++.+. ....++||..|.+||+|+++|+|++||+|++|||.++.++++++++.+|+.+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-- 101 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-- 101 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC--
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 5677888888789999999998653 3467899999999999999999999999999999999999999999999988
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.|.|+|.|.
T Consensus 102 -~~~v~L~v~R~ 112 (118)
T 3b76_A 102 -SSSIVLKALEV 112 (118)
T ss_dssp -CSEEEEEEEEE
T ss_pred -CCeEEEEEEEC
Confidence 77799999873
No 6
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.66 E-value=1.5e-15 Score=120.08 Aligned_cols=90 Identities=27% Similarity=0.447 Sum_probs=78.4
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
...++++|.|.++ ..+|||+|.|+.+. .++.++||..|.+||+|+++|.|++||+|++|||+++.+++|++++++|+.
T Consensus 26 ~~~~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 26 AEATVCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp SSEEEEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CCCcEEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3468889999987 58899999998652 135789999999999999996699999999999999999999999999998
Q ss_pred ccCCCCc-EEEEEEec
Q psy18026 111 VVQKPGP-IKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~-V~L~V~r~ 125 (246)
+ ++. |.|+|.|.
T Consensus 105 ~---~~~~v~l~v~r~ 117 (130)
T 1i16_A 105 L---PDGPVTIVIRRK 117 (130)
T ss_dssp S---CSSEEEEEEEEE
T ss_pred C---CCceEEEEEEeC
Confidence 8 554 99999884
No 7
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.65 E-value=1.7e-15 Score=115.81 Aligned_cols=91 Identities=30% Similarity=0.422 Sum_probs=79.3
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
.+.++++|.|.++. .+|||+|.++.+. ..+.++||..|.++|+|+++|+|++||+|++|||.++.++++++++++|+
T Consensus 12 ~~~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (108)
T 2d92_A 12 WSPEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 90 (108)
T ss_dssp SCSSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred cCCceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 33578899999885 7999999997652 24688999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy18026 110 EVVQKPGPIKLVVAKC 125 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (246)
... .+.|.|+|.|.
T Consensus 91 ~~~--~~~v~l~v~R~ 104 (108)
T 2d92_A 91 AVP--PGLVHLGICSG 104 (108)
T ss_dssp HSC--SEEEEEEEECC
T ss_pred hCC--CCeEEEEEEcC
Confidence 862 35699999984
No 8
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.65 E-value=3e-15 Score=111.49 Aligned_cols=86 Identities=23% Similarity=0.505 Sum_probs=78.5
Q ss_pred cceEEEEEEcC-CCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMD-TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~-~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.++++|.|.+. .+.+|||++.++.+ ..++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 77 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTD---EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS- 77 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSS---SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred cEEEEEEEEECCCCCcccEEEEeccC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 67899999986 56789999998765 67999999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 78 --g~~v~l~v~R~ 88 (95)
T 2vwr_A 78 --GERVNLTIARP 88 (95)
T ss_dssp --CSEEEEEEEEE
T ss_pred --CCEEEEEEEcC
Confidence 67799999984
No 9
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=3.1e-15 Score=116.16 Aligned_cols=88 Identities=24% Similarity=0.344 Sum_probs=78.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.+.|.|.++...+|||.+.++.+. ...++||..|.+||+|+++|+|++||+|++|||..+.++++++++++|+..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~-~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-- 90 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLR-NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI-- 90 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCS-SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC--
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 46888999998878999999997652 235599999999999999999999999999999999999999999999976
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 91 -g~~v~l~v~r~ 101 (117)
T 1v62_A 91 -SEKVRLEILPV 101 (117)
T ss_dssp -SSEEEEEECCB
T ss_pred -CCeEEEEEEEC
Confidence 77799999984
No 10
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.64 E-value=2.2e-15 Score=111.42 Aligned_cols=86 Identities=35% Similarity=0.577 Sum_probs=78.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|+|.++.+.+|||.+.++.+ ..+++|..|.+||||+++|+|++||+|++|||..+.+++++++..+++..
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 77 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRN---DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS-- 77 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSS---SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred ceEEEEEEEeCCCCcccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 4678999999888999999998755 68999999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.+.|+|.|.
T Consensus 78 -~~~v~l~v~R~ 88 (92)
T 2qg1_A 78 -LGTVTLEVGRI 88 (92)
T ss_dssp -CSEEEEEEECC
T ss_pred -CCeEEEEEEcc
Confidence 67799999873
No 11
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=7.6e-15 Score=115.41 Aligned_cols=97 Identities=30% Similarity=0.438 Sum_probs=83.9
Q ss_pred CCCCCCccceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHH
Q psy18026 27 ITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 27 ~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
........+.++|.|.++...+|||++.++.+. ....++||..|.+||+|+++|+|++||+|++|||+.+.++++++
T Consensus 7 ~~~~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 86 (129)
T 2dmz_A 7 GGSDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHD 86 (129)
T ss_dssp CCCSSCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHH
T ss_pred CCCCCCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 333444588999999877789999999997653 13578999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEecC
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKCW 126 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~~ 126 (246)
++++|+.. +..|.|+|.|..
T Consensus 87 ~~~~l~~~---~~~v~l~v~R~~ 106 (129)
T 2dmz_A 87 VVEVLRNA---GQVVHLTLVRRK 106 (129)
T ss_dssp HHHHHHHC---CSSEEEEEEEES
T ss_pred HHHHHHcC---CCeEEEEEEeCC
Confidence 99999985 778999999843
No 12
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=3e-15 Score=115.79 Aligned_cols=95 Identities=24% Similarity=0.368 Sum_probs=82.2
Q ss_pred CCCCCccceEEEEEEcCCCCcccEEEEcccCC-------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCC
Q psy18026 28 TDSSMSLNIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMS 100 (246)
Q Consensus 28 ~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s 100 (246)
+......+.++|.|.++.+.+|||+|.|+.+. ....++||..|.++|+|+++|+|++||+|++|||+++.+++
T Consensus 8 ~~~~~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~ 87 (117)
T 2ehr_A 8 PNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNAS 87 (117)
T ss_dssp SSSSCBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCC
T ss_pred cccccCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 33344457889999998778999999998652 12469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 101 NDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 101 ~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
+.+++.+++.. +..|.|+|.|.
T Consensus 88 ~~~~~~~~~~~---g~~v~l~v~r~ 109 (117)
T 2ehr_A 88 HSEAVEAIKNA---GNPVVFIVQSL 109 (117)
T ss_dssp HHHHHHHHHTS---CSSEEEEECCB
T ss_pred HHHHHHHHHcC---CCeEEEEEEEC
Confidence 99999999987 67899999874
No 13
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.63 E-value=3.3e-15 Score=113.46 Aligned_cols=88 Identities=36% Similarity=0.578 Sum_probs=78.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
.++++|+|.++. .+|||+|.++.+. ..+.+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 2 e~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 2 EKIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp -CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred CeEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 468899999886 7999999998653 235699999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 81 ~---~~~v~l~v~R~ 92 (105)
T 2awx_A 81 T---SDFVYLKVAKP 92 (105)
T ss_dssp C---CSEEEEEEECC
T ss_pred C---CCeEEEEEEcC
Confidence 7 67799999984
No 14
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.63 E-value=3.5e-15 Score=110.64 Aligned_cols=88 Identities=39% Similarity=0.619 Sum_probs=78.2
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
++++++|+|.++. .+|||++.++.+. ..+.+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++
T Consensus 1 s~~~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 1 SMTIMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CCCEEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CcEEEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3678899999884 7899999997653 23569999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEe
Q psy18026 110 EVVQKPGPIKLVVAK 124 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r 124 (246)
.. ++.|.|+|.|
T Consensus 80 ~~---~~~v~l~v~R 91 (94)
T 2fe5_A 80 NT---SDMVYLKVAK 91 (94)
T ss_dssp TC---CSEEEEEEEC
T ss_pred cC---CCeEEEEEEc
Confidence 87 6689999986
No 15
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.63 E-value=7.9e-15 Score=110.56 Aligned_cols=90 Identities=31% Similarity=0.530 Sum_probs=80.1
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
+++++|.|.++ ..+|||++.++.+. ..+.++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 3 ~~~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 3 FKYEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 67889999987 58899999997653 236799999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEecCC
Q psy18026 111 VVQKPGPIKLVVAKCWD 127 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~~~ 127 (246)
. +..|.|+|.|...
T Consensus 82 ~---g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 82 A---GPVVRLVVRRRQP 95 (102)
T ss_dssp S---CSEEEEEEEEECC
T ss_pred C---CCeEEEEEEeCCC
Confidence 7 7789999998543
No 16
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.63 E-value=1e-15 Score=119.61 Aligned_cols=89 Identities=27% Similarity=0.446 Sum_probs=74.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.++++|.|.++...+|||+|.++.+. ..+.++||..|.+||+|+++|.|++||+|++|||.++.++++.+++.+|+..
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~- 101 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA- 101 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC-
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 46889999998878999999997642 1245899999999999999966999999999999999999999999999998
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
++.|+|+|.|.
T Consensus 102 --~~~v~l~v~r~ 112 (120)
T 2iwo_A 102 --SGSIEMQVVAG 112 (120)
T ss_dssp --CSEEEEEEECC
T ss_pred --CCeEEEEEEEC
Confidence 77799999984
No 17
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=3.6e-15 Score=113.25 Aligned_cols=94 Identities=31% Similarity=0.457 Sum_probs=81.5
Q ss_pred CCCccceEEEEEEcCCCCcccEEEEcccCC----CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHH
Q psy18026 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav 105 (246)
++.+.+.++|.|.++. .+|||+|.++.+. ..+.++||..|.++|+|+++|+|++||+|++|||+.+.++++++++
T Consensus 2 s~~~~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 80 (105)
T 1wha_A 2 SSGSSGRHVACLARSE-RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAV 80 (105)
T ss_dssp CCCCCEEEEEEECCCT-TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCCeeEEEEEEeCC-CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3455788899998775 7799999997652 2357999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEecCC
Q psy18026 106 RVLREVVQKPGPIKLVVAKCWD 127 (246)
Q Consensus 106 ~lLr~~~~~~~~V~L~V~r~~~ 127 (246)
.+|+.. +..|.|+|.|..+
T Consensus 81 ~~l~~~---g~~v~l~v~R~~~ 99 (105)
T 1wha_A 81 SLLTAA---SPTIALLLEREAG 99 (105)
T ss_dssp HHHTSC---CSCEEEEEEECCC
T ss_pred HHHHcC---CCeEEEEEEECCC
Confidence 999987 6779999998544
No 18
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.62 E-value=3.2e-15 Score=117.52 Aligned_cols=89 Identities=26% Similarity=0.464 Sum_probs=79.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecc-cCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~-~~s~~eav~lLr~~ 111 (246)
.++++|.|.++...+|||.|.++.+. ..+.++||..|.+||+|+++|+|++||+|++|||+.+. ++++++++.+|+..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 36888999988778999999997763 22458999999999999999999999999999999997 99999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 104 ---~~~v~l~v~r~ 114 (128)
T 2db5_A 104 ---TGSLRLIVARE 114 (128)
T ss_dssp ---CSEEEEEEEEC
T ss_pred ---CCeEEEEEEcC
Confidence 77899999984
No 19
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=9.6e-15 Score=111.82 Aligned_cols=96 Identities=32% Similarity=0.485 Sum_probs=83.9
Q ss_pred CCCCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCH
Q psy18026 22 SSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSN 101 (246)
Q Consensus 22 ss~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~ 101 (246)
|+.++.++.....+.++|.|.++. .+|||.+.++. +.++||..|.+||+|+++|+|++||+|++|||+.+.++++
T Consensus 2 ss~ss~~~~~~~~~~~~v~l~~~~-~~lG~~l~~~~----~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (111)
T 2dlu_A 2 SSGSSGPETVCWGHVEEVELINDG-SGLGFGIVGGK----TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTS 76 (111)
T ss_dssp CSSCCCCCCCSCSEEEEEEEECCS-SCCCEEEECCS----SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCH
T ss_pred cccccCCCCcCcCceEEEEEEeCC-CccCEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 456666776666678899999764 78999999853 4789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEEEec
Q psy18026 102 DEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 102 ~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
++++++|+.. +..|.|+|.|.
T Consensus 77 ~~~~~~l~~~---g~~v~l~v~R~ 97 (111)
T 2dlu_A 77 EQVAQVLRNC---GNSVRMLVARD 97 (111)
T ss_dssp HHHHHHHHHH---CSEEEEEEEES
T ss_pred HHHHHHHHhC---CCeEEEEEEeC
Confidence 9999999987 67799999983
No 20
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=5e-15 Score=115.11 Aligned_cols=88 Identities=35% Similarity=0.601 Sum_probs=78.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
.++++|.|.++. .+|||+|.++.+. ..+.+++|..|.+||+|+++|+|++||+|++|||..+.++++++++.+|+.
T Consensus 23 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 23 MTVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 367889998876 8999999997653 235789999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 102 ~---g~~v~l~v~R~ 113 (117)
T 2byg_A 102 T---SEVVYLKVGKP 113 (117)
T ss_dssp C---CSEEEEEEEEE
T ss_pred C---CCeEEEEEEeC
Confidence 7 67799999873
No 21
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=2.5e-14 Score=111.81 Aligned_cols=92 Identities=24% Similarity=0.426 Sum_probs=79.6
Q ss_pred CCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
.....+.++|.|.++ ..+|||.+.++.+ .+.++||..|.++|+|+++|+|++||+|++|||+.+.++++++++++|+
T Consensus 14 ~~~~~~~~~v~l~~~-~~glG~~~~~g~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 14 SQLKGTFLSTTLKKS-NMGFGFTIIGGDE--PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp TTCCSEEEEEEEECC-TTSCSEEEECCSS--SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred ccCCCcEEEEEEEeC-CCceeEEEecccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 344468888999887 5789999998765 3678999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy18026 110 EVVQKPGPIKLVVAKC 125 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (246)
.... +..|.|+|.|.
T Consensus 91 ~~~~-g~~v~l~v~R~ 105 (123)
T 1ueq_A 91 SVPI-GQSVNLVLCRG 105 (123)
T ss_dssp TSCT-TCEEEEEEEES
T ss_pred hCCC-CCeEEEEEEeC
Confidence 8511 45699999984
No 22
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=4e-15 Score=109.86 Aligned_cols=82 Identities=26% Similarity=0.402 Sum_probs=73.9
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
++.|+|.|+.+.+|||++.+.. .++++|.+|.+||+|++++.|++||+|++|||..+.++++++++++|++. +
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~----~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~ 74 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE----LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM---R 74 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC----GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC---C
T ss_pred eEEEEEEeCCCCceeEEEEeCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---C
Confidence 5689999998899999999742 57899999999999999655999999999999999999999999999998 5
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
+.|+|+|.+
T Consensus 75 ~~v~l~v~r 83 (88)
T 1kwa_A 75 GSITFKIVP 83 (88)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEC
Confidence 689999987
No 23
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.62 E-value=3.3e-15 Score=113.38 Aligned_cols=88 Identities=31% Similarity=0.372 Sum_probs=77.8
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
..+.+|.|.++...+|||++.++.+. ..+++|..|.+||+|+++|.|++||+|++|||.++.++++++++.+|+..
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~--~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-- 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEH--GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-- 83 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGG--TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC--
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCC--CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 35678999988888999999998752 46899999999999999744999999999999999999999999999998
Q ss_pred CCCcEEEEEEecC
Q psy18026 114 KPGPIKLVVAKCW 126 (246)
Q Consensus 114 ~~~~V~L~V~r~~ 126 (246)
++.|+|+|.+.+
T Consensus 84 -~~~v~l~v~~~~ 95 (103)
T 2dc2_A 84 -RGEIEFEVVYVA 95 (103)
T ss_dssp -CSEEEEEEEECC
T ss_pred -CCcEEEEEEecC
Confidence 778999999843
No 24
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=6.5e-15 Score=112.17 Aligned_cols=91 Identities=33% Similarity=0.560 Sum_probs=79.3
Q ss_pred ccceEEEEEEcCCCCcccEEEEc---ccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
.+++++|.|.++. .+|||+|.+ +.+. ..+.++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.++
T Consensus 7 ~~~~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 7 GLELFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp CEEEEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred CceEEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3688899998774 789999999 3332 2367899999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEecCC
Q psy18026 109 REVVQKPGPIKLVVAKCWD 127 (246)
Q Consensus 109 r~~~~~~~~V~L~V~r~~~ 127 (246)
+.. +..|.|+|.|...
T Consensus 86 ~~~---~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 86 RNT---KGNVRFVIGREKP 101 (107)
T ss_dssp HHC---CSEEEEEEEEECC
T ss_pred hcC---CCeEEEEEEeCCC
Confidence 987 7789999998543
No 25
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.61 E-value=1.1e-14 Score=110.38 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=81.9
Q ss_pred CCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHH
Q psy18026 24 FSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 24 ~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
.|+..+.......++|.|.+....+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||+.+.++++++
T Consensus 4 ~S~~~~~~~~~~~~~v~l~k~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~ 80 (104)
T 1wi2_A 4 GSSGNNELTQFLPRIVTLKKPPGAQLGFNIRGGKA--SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSK 80 (104)
T ss_dssp CCCSCCCCCSSCCEEEEECCCTTCCCSEEEECCSS--SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHH
T ss_pred ccccccCcCCCCCEEEEEEeCCCCCccEEEEcccC--CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34444555556788999999887899999999765 35789999999999999999 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~ 125 (246)
++++|+. +..+.|+|.+.
T Consensus 81 ~~~~l~~----~~~v~l~v~r~ 98 (104)
T 1wi2_A 81 AVEILKT----AREISMRVRFF 98 (104)
T ss_dssp HHHHHHH----SSSEEEEEECC
T ss_pred HHHHHhC----CCEEEEEEEEC
Confidence 9999987 35699999974
No 26
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.61 E-value=5.5e-15 Score=113.10 Aligned_cols=83 Identities=18% Similarity=0.340 Sum_probs=76.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.++|.|.++...+|||.+.+. +.|++|..|.+||+|+++|+|++||+|++|||..+.++++++++.+++..
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~--- 73 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA--- 73 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEEC-----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSC---
T ss_pred eEEEEEEEeCCCCccCEEEEeC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC---
Confidence 6789999988889999999872 67899999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
++.|.|+|.|.
T Consensus 74 ~~~v~l~v~R~ 84 (106)
T 2la8_A 74 NGKVSMEVTRP 84 (106)
T ss_dssp BSCEEEEEEEC
T ss_pred CCeEEEEEEeC
Confidence 67799999984
No 27
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.61 E-value=1e-14 Score=108.60 Aligned_cols=88 Identities=38% Similarity=0.596 Sum_probs=77.8
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.+.++|.|.++. .+|||++.++.+. ..+.+++|..|.++|+|+++|+|++||+|++|||..+.++++++++.+++..
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~- 81 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT- 81 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC-
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 367899999874 8999999997653 2357999999999999999999999999999999999999999999999986
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 82 --g~~v~l~v~R~ 92 (96)
T 1d5g_A 82 --GQVVHLLLEKG 92 (96)
T ss_dssp --CSEEEEEEECC
T ss_pred --CCeEEEEEEcC
Confidence 67799999874
No 28
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.61 E-value=4.9e-15 Score=122.79 Aligned_cols=87 Identities=31% Similarity=0.586 Sum_probs=77.6
Q ss_pred cceEEEEEEcCCCCcccEEEEc---ccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
.++++|.|.++. .+|||+|.+ +.+. ..+.++||..|.+||+|+++|+|++||+|++|||+++.+++|++++.+|+
T Consensus 79 ~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 79 LELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp SEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred ceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 478899999886 789999999 3321 23578999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEe
Q psy18026 110 EVVQKPGPIKLVVAK 124 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r 124 (246)
.+ ++.|.|+|.|
T Consensus 158 ~~---g~~v~L~V~R 169 (170)
T 3egg_C 158 NT---KGRVRFMIGR 169 (170)
T ss_dssp HC---CSEEEEEEEE
T ss_pred cC---CCEEEEEEEe
Confidence 97 7789999987
No 29
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.61 E-value=1.1e-14 Score=113.05 Aligned_cols=88 Identities=22% Similarity=0.386 Sum_probs=77.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+++.|.|.++.+.+|||+|.++.+. ...+++|..|.++|+|+++|+|++||+|++|||..+.++++++++.+++..
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-- 90 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADL-ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA-- 90 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSS-SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT--
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 46888889988889999999997652 357899999999999999999999999999999999999999999999988
Q ss_pred CCCc-EEEEEEec
Q psy18026 114 KPGP-IKLVVAKC 125 (246)
Q Consensus 114 ~~~~-V~L~V~r~ 125 (246)
++. +.|+|.|.
T Consensus 91 -~~~~~~l~v~R~ 102 (119)
T 1x6d_A 91 -REPRQAVIVTRK 102 (119)
T ss_dssp -TSSSEEEEEEEC
T ss_pred -CCCeEEEEEEcC
Confidence 555 56777773
No 30
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=1.6e-14 Score=110.01 Aligned_cols=89 Identities=28% Similarity=0.479 Sum_probs=78.6
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCC------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHH
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVR 106 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~ 106 (246)
+.+.++|.|.++ ..+|||+|.++.+. ....++||..|.++|+|+++|.|++||+|++|||+++.++++.+++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 467889999987 68999999997642 13679999999999999999559999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEEEec
Q psy18026 107 VLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 107 lLr~~~~~~~~V~L~V~r~ 125 (246)
+++.. +..|.|+|.|.
T Consensus 85 ~~~~~---~~~v~l~v~R~ 100 (107)
T 1uhp_A 85 AFKTA---KEPIVVQVLRR 100 (107)
T ss_dssp HHHHC---CSSEEEEEEEC
T ss_pred HHHcC---CCcEEEEEEeC
Confidence 99987 77899999884
No 31
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=1.8e-15 Score=116.05 Aligned_cols=93 Identities=28% Similarity=0.493 Sum_probs=81.2
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCC-------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
.+++|.|.++.+.+|||+|.++.+. ....++||..|.++|+|+++|+|++||+|++|||+.+.++++++++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4667889988888999999998642 235789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEecCCCCC
Q psy18026 108 LREVVQKPGPIKLVVAKCWDPNP 130 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~~~~~~ 130 (246)
++.. +..|.|+|.|.+++.+
T Consensus 89 l~~~---g~~v~l~v~r~~~~~~ 108 (111)
T 1uju_A 89 LRSV---GDTLTVLVCDGFESGP 108 (111)
T ss_dssp HSSC---SSEEEECCCCCCCCSC
T ss_pred HHcC---CCeEEEEEEECCCCCC
Confidence 9886 6779999998666543
No 32
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.60 E-value=9.6e-15 Score=108.39 Aligned_cols=85 Identities=28% Similarity=0.439 Sum_probs=75.9
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
..+.+|.|.+.. .+|||++.++. ...++||..|.+||+|+++|+|++||+|++|||..+.++++++++++|+..
T Consensus 3 ~~~r~v~l~k~~-~~lG~~i~~~~---~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 76 (93)
T 3o46_A 3 DSVKIIRLVKNR-EPLGATIKKDE---QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS-- 76 (93)
T ss_dssp -CCEEEEEEESS-SCCCEEEEECT---TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC--
T ss_pred ccEEEEEEEeCC-CCccEEEEecC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 356788998875 79999999863 368999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.|.|+|.+.
T Consensus 77 -~~~v~l~v~~~ 87 (93)
T 3o46_A 77 -QGAITFKIIPG 87 (93)
T ss_dssp -CEEEEEEEECC
T ss_pred -CCeEEEEEEeC
Confidence 67899999873
No 33
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.60 E-value=4.2e-15 Score=112.99 Aligned_cols=89 Identities=18% Similarity=0.351 Sum_probs=77.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcC-CCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~G-rL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
..+++|.|.++...+|||.+.++.+ ...++||..|.+||+|+++| +|++||+|++|||..+.++++.+++.+|+...
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~--~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCC--CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 5788999998887899999999865 25689999999999999999 69999999999999999999999999999872
Q ss_pred C-CCCcEEEEEEe
Q psy18026 113 Q-KPGPIKLVVAK 124 (246)
Q Consensus 113 ~-~~~~V~L~V~r 124 (246)
. ....|.|+|.|
T Consensus 94 ~~~~~~v~l~v~r 106 (107)
T 3nfk_A 94 ERHSGELMLLVRP 106 (107)
T ss_dssp GSBTTBEEEEEEC
T ss_pred ccCCcEEEEEEEc
Confidence 1 01379999876
No 34
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.60 E-value=1.2e-14 Score=108.42 Aligned_cols=89 Identities=25% Similarity=0.436 Sum_probs=77.9
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
++.++|.|.++ ..+|||++.++.+. ....+++|..|.+||||+++|+|++||+|++|||..+.+++++++.++|+..
T Consensus 2 ~~~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (97)
T 2jil_A 2 MRTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 80 (97)
T ss_dssp EEEEEEEEECB-TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred ceEEEEEEEeC-CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56788999876 48999999997652 2357899999999999999999999999999999999999999999999985
Q ss_pred cCCCCcEEEEEEecC
Q psy18026 112 VQKPGPIKLVVAKCW 126 (246)
Q Consensus 112 ~~~~~~V~L~V~r~~ 126 (246)
+..+.|+|.|..
T Consensus 81 ---g~~v~l~v~R~~ 92 (97)
T 2jil_A 81 ---GQEAALLIEYDV 92 (97)
T ss_dssp ---CSEEEEEEEEEC
T ss_pred ---CCeEEEEEEeCC
Confidence 778999999843
No 35
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.60 E-value=7.3e-15 Score=108.31 Aligned_cols=86 Identities=31% Similarity=0.361 Sum_probs=77.1
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|+|.+....+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||..+.++++.+++.+++..
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~--~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 78 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-- 78 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CccEEEEEEeCCCCCcCEEEEcccC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 3567899999878999999998765 257899999999999999955999999999999999999999999999987
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 79 -~~~v~l~v~r 88 (90)
T 1qav_A 79 -GKEVVLEVKY 88 (90)
T ss_dssp -CSEEEEEEEE
T ss_pred -CCeEEEEEEE
Confidence 6779999987
No 36
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=6.5e-15 Score=111.52 Aligned_cols=92 Identities=21% Similarity=0.373 Sum_probs=79.4
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
..++.++|.|.++ ..+|||.+.++.+ ...++||..|.++|+|+++|+|++||+|++|||+.+.++++++++++|+.+
T Consensus 6 ~~~~~~~v~l~~~-~~g~G~~i~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 6 SGYKELDVHLRRM-ESGFGFRILGGDE--PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp SSEEEECCEEESS-SSSCCEEECCCCS--TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred CCceEEEEEEEeC-CCccCEEEeeecC--CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3478889999985 5889999998765 367899999999999999999999999999999999999999999999886
Q ss_pred cCCCCcEEEEEEecCC
Q psy18026 112 VQKPGPIKLVVAKCWD 127 (246)
Q Consensus 112 ~~~~~~V~L~V~r~~~ 127 (246)
.. +..|.|+|.|...
T Consensus 83 ~~-g~~v~l~v~R~~~ 97 (103)
T 1uep_A 83 AR-NGQVNLTVRRKVL 97 (103)
T ss_dssp HH-HTEEEEEEEEECC
T ss_pred CC-CCcEEEEEEeCCC
Confidence 10 2569999998543
No 37
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.59 E-value=2e-14 Score=108.10 Aligned_cols=88 Identities=35% Similarity=0.571 Sum_probs=78.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCC---CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
...++|+|.++. .+|||++.++.+.. .+.+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 6 ~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 6 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 467889999876 89999999987632 25799999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 85 ~---g~~v~l~v~R~ 96 (101)
T 2jik_A 85 A---GYAVSLRVQHR 96 (101)
T ss_dssp C---CSEEEEEEEEE
T ss_pred C---CCeEEEEEEeC
Confidence 6 66799999884
No 38
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.59 E-value=7.1e-15 Score=107.57 Aligned_cols=85 Identities=32% Similarity=0.408 Sum_probs=74.8
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
++++|+|.++...+|||++.++.+ ...++||..|.+||||++++.|++||+|++|||..+.++++++++.+++..
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 76 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ--- 76 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC---
T ss_pred CEEEEEEEECCCCcccEEEEccCC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 467899999888899999999865 256899999999999999533999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
++.+.|+|..
T Consensus 77 ~~~v~l~v~~ 86 (87)
T 4e34_A 77 RGEIEFEVVY 86 (87)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 6779998864
No 39
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.59 E-value=1.6e-14 Score=113.04 Aligned_cols=87 Identities=29% Similarity=0.400 Sum_probs=79.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
....+|.|.++...+|||++.++.+ ...++||..|.+||+|+++|+|++||+|++|||..+.++++++++.+|+..
T Consensus 18 ~~~~~v~l~k~~~~~lG~~i~gg~~--~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-- 93 (125)
T 3hpk_A 18 TVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV-- 93 (125)
T ss_dssp EEEEEEEEECCTTSCCCEEEEECSS--CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS--
T ss_pred CCCeEEEEEeCCCCCcCEEEeccCC--CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 4667888999888899999999875 367899999999999999999999999999999999999999999999998
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.|.|+|.+.
T Consensus 94 -~~~v~l~v~r~ 104 (125)
T 3hpk_A 94 -KGEVTIHYNKL 104 (125)
T ss_dssp -CSEEEEEEEEE
T ss_pred -CCeEEEEEEEC
Confidence 67799999873
No 40
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.59 E-value=8e-15 Score=115.51 Aligned_cols=94 Identities=33% Similarity=0.491 Sum_probs=77.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
...++|.|.++...+|||+|.++.+. ..+.++||..|.+||+|+++|+|++||+|++|||+++.+++|++++++|+.+
T Consensus 24 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 24 QLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 34666777666789999999997642 1235899999999999999999999999999999999999999999999975
Q ss_pred c----CCCCcEEEEEEecCC
Q psy18026 112 V----QKPGPIKLVVAKCWD 127 (246)
Q Consensus 112 ~----~~~~~V~L~V~r~~~ 127 (246)
. ..+..|+|+|.|...
T Consensus 104 ~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 104 MSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHTCEEEEEEEECSC
T ss_pred hccccCCCCEEEEEEEeCCC
Confidence 1 114679999998544
No 41
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=5.6e-15 Score=114.59 Aligned_cols=101 Identities=19% Similarity=0.295 Sum_probs=82.2
Q ss_pred CCCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhc-CCCCCCCEEEEECCeecccCCH
Q psy18026 23 SFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALD-GRIEPGDMILQVNDINFENMSN 101 (246)
Q Consensus 23 s~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~-GrL~~GD~Il~VNg~~~~~~s~ 101 (246)
+++.........+.++|.|.++...+|||++.++.+ ...++||..|.++|+|+++ |.|++||+|++|||..+.++++
T Consensus 3 ~~~~~~~~~~~~~~~~v~l~k~~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~ 80 (119)
T 2cs5_A 3 SGSSGNGGIPHDNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 80 (119)
T ss_dssp SCCCCCCCCCSSCCEEEEECCCSSSCCSEEEEEEGG--GTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCH
T ss_pred cccccCCCcCCCCeEEEEEEeCCCCCcCEEEecccC--CCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCH
Confidence 344444444446788999999887789999999865 2568999999999999999 4499999999999999999999
Q ss_pred HHHHHHHHhccCC-CCcEEEEEEec
Q psy18026 102 DEAVRVLREVVQK-PGPIKLVVAKC 125 (246)
Q Consensus 102 ~eav~lLr~~~~~-~~~V~L~V~r~ 125 (246)
.+++.+++..... ...|.|+|.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 81 DQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred HHHHHHHHhccccCCCEEEEEEEcc
Confidence 9999999987210 13699999883
No 42
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.58 E-value=1.4e-14 Score=112.16 Aligned_cols=89 Identities=25% Similarity=0.375 Sum_probs=78.4
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCCC----CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNKG----GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~----~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
..++.++|.|.++.+.+|||+|.++.+.. +..++||..|.++|+|+ .| |++||+|++|||+++.++++.+++.+
T Consensus 11 ~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 11 VIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred ccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 34788899999887789999999987531 36789999999999996 55 99999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy18026 108 LREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (246)
++.. +..|.|+|.|.
T Consensus 89 l~~~---~~~v~l~v~R~ 103 (117)
T 2csj_A 89 LRKS---GKIAAIVVKRP 103 (117)
T ss_dssp HHHS---CSEEEEEEEEE
T ss_pred HhcC---CCeEEEEEEEC
Confidence 9987 77899999984
No 43
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=6.3e-15 Score=114.59 Aligned_cols=88 Identities=35% Similarity=0.568 Sum_probs=77.9
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.++++|+|.++. .+|||+|.++.+. .++.+++|..|.++|||+++|+|++||+|++|||..+.++++++++.+++..
T Consensus 24 ~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~- 101 (117)
T 2fne_A 24 PQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT- 101 (117)
T ss_dssp CEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 367889999886 8899999997642 1246899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
++.|.|+|.|.
T Consensus 102 --~~~v~l~v~R~ 112 (117)
T 2fne_A 102 --KGTVTLMVLSS 112 (117)
T ss_dssp --CSSEEEEEEEC
T ss_pred --CCeEEEEEEeC
Confidence 67799999984
No 44
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.58 E-value=1e-14 Score=111.30 Aligned_cols=83 Identities=37% Similarity=0.571 Sum_probs=70.7
Q ss_pred EEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 40 TLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 40 ~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
.+..+...+|||+|.||.+. ..+.++||..|.+||+|+++|+|++||+|++|||..+.++++++++.+++.. ++
T Consensus 6 ~~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~ 82 (106)
T 4amh_A 6 HLVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT---SD 82 (106)
T ss_dssp ------CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC---CS
T ss_pred ccCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC---CC
Confidence 34445578999999999875 2456999999999999999999999999999999999999999999999987 77
Q ss_pred cEEEEEEec
Q psy18026 117 PIKLVVAKC 125 (246)
Q Consensus 117 ~V~L~V~r~ 125 (246)
.|.|+|.|.
T Consensus 83 ~v~l~v~R~ 91 (106)
T 4amh_A 83 FVYLKVAKP 91 (106)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 899999984
No 45
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.58 E-value=1.8e-14 Score=114.21 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=77.4
Q ss_pred cceEEEEEEcC---------CCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHH
Q psy18026 34 LNIITVTLNMD---------TVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 34 ~~i~~V~L~k~---------~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
..+..+.|.+. ...+|||+|.++.+. .++.++||..|.+||+|+++|+|++||+|++|||+.+.+++|++
T Consensus 26 ~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~ 105 (131)
T 1wfg_A 26 RLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEE 105 (131)
T ss_dssp EEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHH
T ss_pred ceeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 45667777765 578899999997653 23559999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~ 125 (246)
++++|+.+.. +..|.|+|.|.
T Consensus 106 ~~~~l~~~~~-g~~v~l~v~R~ 126 (131)
T 1wfg_A 106 VYNIILESKP-EPQVELVVSRS 126 (131)
T ss_dssp HHHHHHHTSS-SSEEEEEEEEE
T ss_pred HHHHHHhcCC-CCEEEEEEEcC
Confidence 9999998721 36699999983
No 46
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.58 E-value=1.5e-14 Score=114.74 Aligned_cols=88 Identities=20% Similarity=0.305 Sum_probs=77.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCC----------CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKG----------GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~----------~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
.+..+|+|.+....+|||+|.++.+.. ...|+||..|.+||+|+++| |++||+|++|||..+.++++++
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 456689999877789999999986521 12379999999999999999 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~ 125 (246)
++.+|+.. +..|.|+|.+.
T Consensus 105 ~~~~l~~~---g~~v~l~v~~~ 123 (132)
T 3l4f_D 105 VVNMIRQG---GNTLMVKVVMV 123 (132)
T ss_dssp HHHHHHHT---TTEEEEEEECC
T ss_pred HHHHHHcC---CCEEEEEEEEC
Confidence 99999987 77899999873
No 47
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=4.2e-14 Score=109.91 Aligned_cols=88 Identities=35% Similarity=0.571 Sum_probs=79.0
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCC---CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
...++|+|.++. .+|||+|.++.+.. ...++||..|.++|+|+++|+|++||+|++|||+.+.++++.+++.+++.
T Consensus 16 ~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 16 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578889999886 89999999976531 26799999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 95 ~---g~~v~l~v~R~ 106 (120)
T 2eno_A 95 A---GYAVSLRVQHR 106 (120)
T ss_dssp H---CSEEEEEEEEE
T ss_pred C---CCeEEEEEEeC
Confidence 7 67799999984
No 48
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.58 E-value=4e-14 Score=105.78 Aligned_cols=88 Identities=31% Similarity=0.369 Sum_probs=76.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.+. ..+|||++.++.+ ...+++|..|.+||+|+++|+|++||+|++|||..+.++++++++++|+..
T Consensus 4 ~~~~~v~l~~~-~~~lG~~i~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 78 (97)
T 1n7e_A 4 AIIYTVELKRY-GGPLGITISGTEE--PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA-- 78 (97)
T ss_dssp CCEEEEEEECT-TSCCCEEEECCSS--TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred ceEEEEEEEeC-CCCcCEEEEcccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 56888999765 5779999998754 247999999999999999999999999999999999999999999999965
Q ss_pred CCCcEEEEEEecCC
Q psy18026 114 KPGPIKLVVAKCWD 127 (246)
Q Consensus 114 ~~~~V~L~V~r~~~ 127 (246)
+..|.|+|.|...
T Consensus 79 -g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 79 -GETVTLKIKKQTD 91 (97)
T ss_dssp -CSEEEEEEECCCC
T ss_pred -CCeEEEEEEeCCC
Confidence 6679999988433
No 49
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=2e-14 Score=111.45 Aligned_cols=89 Identities=25% Similarity=0.438 Sum_probs=77.9
Q ss_pred cceEEEEEEcCC------CCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHH
Q psy18026 34 LNIITVTLNMDT------VNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEA 104 (246)
Q Consensus 34 ~~i~~V~L~k~~------~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~ea 104 (246)
....+|.|.++. ..+|||+|.++.+. .+..++||..|.++|+|+++|+|++||+|++|||+++.+++++++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 466788888776 47899999998753 124589999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEEEec
Q psy18026 105 VRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 105 v~lLr~~~~~~~~V~L~V~r~ 125 (246)
+.+|+.. +..|.|+|.|.
T Consensus 91 ~~~l~~~---~~~v~l~v~R~ 108 (117)
T 1ujd_A 91 QSIISQQ---SGEAEICVRLD 108 (117)
T ss_dssp HHHHSCC---SSCEEEEEESS
T ss_pred HHHHhcC---CCEEEEEEEEC
Confidence 9999987 77899999983
No 50
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.57 E-value=1.7e-14 Score=109.57 Aligned_cols=89 Identities=37% Similarity=0.555 Sum_probs=76.7
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
...++++|+| +. ..+|||+|.++.+. ....++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 8 ~~~~~~~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 8 KEPEIITVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp --CCEEEEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3467888888 44 58899999986543 346789999999999999999999999999999999999999999999988
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 86 ~---g~~v~l~v~R~ 97 (106)
T 3axa_A 86 T---SSVVTLEVAKQ 97 (106)
T ss_dssp C---CSEEEEEEECC
T ss_pred C---CCeEEEEEEeC
Confidence 7 77899999983
No 51
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.9e-14 Score=105.92 Aligned_cols=86 Identities=24% Similarity=0.410 Sum_probs=74.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.++|.|.++. .+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||..+.++++++++.+|+....
T Consensus 2 ~~~~v~l~~~~-~g~G~~~~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~- 77 (90)
T 2q9v_A 2 MEQDIFLWRKE-TGFGFRILGGNE--PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK- 77 (90)
T ss_dssp EEEEEEEECBT-TBCCEEEEECSS--TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH-
T ss_pred CcEEEEEEECC-CccCEEEEcccc--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-
Confidence 45678898875 789999999765 25679999999999999999999999999999999999999999999998721
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
++.|.|+|.|
T Consensus 78 ~~~v~l~v~R 87 (90)
T 2q9v_A 78 QGHVNLTVRQ 87 (90)
T ss_dssp HTEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 1279999987
No 52
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.57 E-value=8.9e-15 Score=113.02 Aligned_cols=89 Identities=27% Similarity=0.492 Sum_probs=79.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecc-cCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~-~~s~~eav~lLr~~ 111 (246)
.++++|.|.+....+|||++.++.+. ....++||..|.+||+|+++|+|++||+|++|||..+. ++++++++.+++..
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 57889999998778999999997643 23578999999999999999999999999999999998 99999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 99 ---~~~v~l~v~R~ 109 (117)
T 2o2t_A 99 ---KDTVQLVIARG 109 (117)
T ss_dssp ---CSEEEEEEESS
T ss_pred ---CCEEEEEEEeC
Confidence 77899999984
No 53
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.57 E-value=3.4e-14 Score=107.24 Aligned_cols=91 Identities=18% Similarity=0.271 Sum_probs=75.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.+..+.+|||++.+........+++|..|.+||+|+++|.|++||+|++|||..+.++++++++++|+....
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 46788999987778999999863221123479999999999999977799999999999999999999999999998411
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|+|+|.|+
T Consensus 88 -g~~v~l~v~R~ 98 (101)
T 2yt7_A 88 -QTSVTLSIVHC 98 (101)
T ss_dssp -SSEEEEEECCC
T ss_pred -CCeEEEEEEeC
Confidence 56799999884
No 54
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=2e-14 Score=109.38 Aligned_cols=88 Identities=25% Similarity=0.383 Sum_probs=73.3
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC--
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-- 113 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~-- 113 (246)
.++|.|.+. ..+|||+|.|+.+. ....+||..|.++++|+++|+|++||+|++|||+++.+++|++++++|+.+..
T Consensus 7 ~~~v~l~k~-~~glG~~i~gg~~~-~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 7 GTLVRVKKS-AATLGIAIEGGANT-RQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SEEEEEECC-SSSCCEEEECBTTS-SCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred eEEEEEEcC-CCcCCeEEECCCCC-CCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 456778665 48899999998762 22345999999999999999999999999999999999999999999998521
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
....+.|+|.|.
T Consensus 85 ~~~~i~l~v~r~ 96 (103)
T 1ufx_A 85 DRDYIDFLVTEF 96 (103)
T ss_dssp SCSEEEEEECCC
T ss_pred CCCeEEEEEEEc
Confidence 145689999884
No 55
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=4.3e-14 Score=107.98 Aligned_cols=88 Identities=28% Similarity=0.468 Sum_probs=78.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
-+.++|.|.++. .+|||++.++.+. ....++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 84 (110)
T 1um1_A 7 GYVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG- 84 (110)
T ss_dssp CCEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-
T ss_pred CcEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 578899999875 7899999997653 2357899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 85 --~~~v~l~v~R~ 95 (110)
T 1um1_A 85 --GKKMRFLVAKS 95 (110)
T ss_dssp --CSEEEEEEECC
T ss_pred --CCeEEEEEEeC
Confidence 67799999983
No 56
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.56 E-value=5.3e-14 Score=103.70 Aligned_cols=84 Identities=27% Similarity=0.430 Sum_probs=75.8
Q ss_pred cceEEEEEEcCCC-CcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTV-NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~-~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.++++|+|.++.. .+|||++.++.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 79 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLL---EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES- 79 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTT---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS-
T ss_pred cceEEEEEEECCCCCCccEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 5788999998764 689999998765 6899999999999999999 999999999999999999999999999876
Q ss_pred CCCCcEEEEEEe
Q psy18026 113 QKPGPIKLVVAK 124 (246)
Q Consensus 113 ~~~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 80 --g~~v~l~v~R 89 (91)
T 1m5z_A 80 --GNKLDLVISR 89 (91)
T ss_dssp --TTEEEEEEEE
T ss_pred --CCEEEEEEEe
Confidence 6679999987
No 57
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.56 E-value=1.2e-13 Score=108.92 Aligned_cols=91 Identities=23% Similarity=0.428 Sum_probs=77.8
Q ss_pred CCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
....+.++|.|.++. .+|||++.++.+ ...+++|..|.+||+|+++|+|++||+|++|||+.+.++++++++++|+.
T Consensus 14 ~~~g~~~~v~l~~~~-~g~G~~i~g~~~--~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 90 (129)
T 2kpk_A 14 ELKGKFIHTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS 90 (129)
T ss_dssp TSCSEEEEEEEEECS-SCCSEEEEEEEE--TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred hcCCcEEEEEEEECC-CcccEEEeCccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 334577889999864 789999999654 36689999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
+.. +..|.|+|.|.
T Consensus 91 ~~~-g~~v~l~v~R~ 104 (129)
T 2kpk_A 91 IPI-GASVDLELCRG 104 (129)
T ss_dssp SCT-TEEEEEEEEEC
T ss_pred CCC-CCeEEEEEEeC
Confidence 721 23499999984
No 58
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.56 E-value=3.8e-14 Score=106.89 Aligned_cols=87 Identities=25% Similarity=0.492 Sum_probs=77.5
Q ss_pred CCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
....+..+|.|.++ ..+|||++.++.+ ..++||..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 7 ~~~~~~~~v~l~k~-~~glG~~~~~~~~---~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (104)
T 3i4w_A 7 DIPREPRRIVIHRG-STGLGFNIVGGEX---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 82 (104)
T ss_dssp CCCSSCEEEEEECB-TTBTSEEEEECC----CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCCCccEEEEEEeC-CCccCEEEECCCC---CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34457788999987 4789999999754 5699999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEe
Q psy18026 111 VVQKPGPIKLVVAK 124 (246)
Q Consensus 111 ~~~~~~~V~L~V~r 124 (246)
. +..+.|+|.+
T Consensus 83 ~---~~~v~l~v~r 93 (104)
T 3i4w_A 83 A---GQTVTIIAQY 93 (104)
T ss_dssp S---CSEEEEEEEE
T ss_pred C---CCeEEEEEEE
Confidence 7 7789999987
No 59
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=3.4e-14 Score=107.40 Aligned_cols=89 Identities=24% Similarity=0.395 Sum_probs=78.1
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
..+.++|.|.++. .+|||.+.++.+...+.+++|..|.++++|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 9 ~~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 86 (104)
T 2djt_A 9 ASGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG- 86 (104)
T ss_dssp CCCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT-
T ss_pred CCceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3577889999775 78999999876522367899999999999999999999999999999999999999999999886
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 87 --g~~v~l~v~R~ 97 (104)
T 2djt_A 87 --GPQLHLVIRRP 97 (104)
T ss_dssp --CSEEEEEECCC
T ss_pred --CCeEEEEEEEC
Confidence 67799999874
No 60
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=1e-13 Score=105.87 Aligned_cols=99 Identities=30% Similarity=0.436 Sum_probs=85.3
Q ss_pred CCCCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCC----CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecc
Q psy18026 22 SSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE 97 (246)
Q Consensus 22 ss~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~ 97 (246)
|++++.+......+.+++.|.++ ..+|||.|.++.+. ....+++|..|.++|+|+++| |++||+|++|||+.+.
T Consensus 2 s~~s~~~~~~~~~~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~ 79 (110)
T 1x5q_A 2 SSGSSGEPARIEEEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQ 79 (110)
T ss_dssp CCCCCCCCCCCCCEEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECT
T ss_pred CCCccCCcccCCcceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECC
Confidence 45666666666678889999987 68999999987642 236899999999999999999 9999999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 98 NMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 98 ~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
++++.+++..++.. +..|.|+|.|.
T Consensus 80 ~~~~~~~~~~~~~~---g~~v~l~v~R~ 104 (110)
T 1x5q_A 80 GAEHHEAVEALRGA---GTAVQMRVWRE 104 (110)
T ss_dssp TCCHHHHHHHHHSC---CSEEEEEEEEC
T ss_pred CcCHHHHHHHhhCC---CCeEEEEEEEC
Confidence 99999999999876 67799999984
No 61
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.56 E-value=2.6e-14 Score=106.80 Aligned_cols=87 Identities=28% Similarity=0.408 Sum_probs=77.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCC----CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKG----GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~----~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
.+++|.|.+....+|||+|.++.+.. ...+++|..|.++|+|+++|+|++||+|++|||..+.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 46789999977789999999987531 13489999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEe
Q psy18026 111 VVQKPGPIKLVVAK 124 (246)
Q Consensus 111 ~~~~~~~V~L~V~r 124 (246)
. +..+.|+|.|
T Consensus 85 ~---g~~v~l~v~R 95 (98)
T 1ihj_A 85 A---DFKIELEIQT 95 (98)
T ss_dssp S---CSEEEEEEEE
T ss_pred C---CCeEEEEEEe
Confidence 6 7789999987
No 62
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=3.6e-14 Score=104.94 Aligned_cols=85 Identities=29% Similarity=0.499 Sum_probs=75.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+..+|+|.+. ..+|||.+.++.+ .+.+++|..|.++|+|+++|.|++||+|++|||..+.++++++++.+++..
T Consensus 4 ~~~r~v~l~k~-~~glG~~l~~~~~--~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 78 (93)
T 2dkr_A 4 GSSGVVELPKT-DEGLGFNIMGGKE--QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-- 78 (93)
T ss_dssp SCSCEEEEECC-TTCCCEEEECSSS--SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC--
T ss_pred CCCEEEEEEeC-CCCccEEEecccC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 35568899876 4899999998765 368999999999999999977999999999999999999999999999987
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
++.+.|+|.|
T Consensus 79 -~~~v~l~v~r 88 (93)
T 2dkr_A 79 -QGSVKLVVRS 88 (93)
T ss_dssp -CSEEEEEECC
T ss_pred -CCcEEEEEEe
Confidence 6679999987
No 63
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.56 E-value=2.5e-14 Score=108.05 Aligned_cols=82 Identities=27% Similarity=0.402 Sum_probs=74.7
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
++.|.|.|..+.+|||++.... +.+++|..|.+||+|+++|+|++||+|++|||..+.++++++++++|+.. +
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~---~ 85 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNE----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET---K 85 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECT----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC---C
T ss_pred cEEEEEEeCCCCCeeEEEEeCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---C
Confidence 5679999988899999998742 57899999999999999999999999999999999999999999999987 6
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
+.|.|+|.+
T Consensus 86 ~~v~L~V~~ 94 (97)
T 2ejy_A 86 GMISLKVIP 94 (97)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 779999986
No 64
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.55 E-value=6.5e-14 Score=106.54 Aligned_cols=90 Identities=41% Similarity=0.719 Sum_probs=79.0
Q ss_pred ccceEEEEEE-cCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 33 SLNIITVTLN-MDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 33 ~~~i~~V~L~-k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
..+.++|.|. ++...+|||++.++.+. ..+.+++|..|.++|+|+++|+|++||+|++|||..+.++++++++.++
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3788899997 46678999999987643 1356999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEec
Q psy18026 109 REVVQKPGPIKLVVAKC 125 (246)
Q Consensus 109 r~~~~~~~~V~L~V~r~ 125 (246)
+.. +..|.|+|.|.
T Consensus 90 ~~~---g~~v~l~v~R~ 103 (108)
T 2jre_A 90 RNA---GNPVRLLLIRR 103 (108)
T ss_dssp HHH---CSEEEEEEEEC
T ss_pred HcC---CCeEEEEEEeC
Confidence 986 77899999883
No 65
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.55 E-value=8.6e-14 Score=107.19 Aligned_cols=84 Identities=21% Similarity=0.398 Sum_probs=76.1
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.+....+|||.+.+. ..+++|..|.+||+|+++|.|++||+|++|||..+.++++++++++|+..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~-----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 96 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE-----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM-- 96 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC-----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred CceEEEEEEeCCCCceeEEEEeC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 47888999998767999999874 68999999999999999995599999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
.+.|.|+|.+.
T Consensus 97 -~~~v~l~v~r~ 107 (113)
T 1va8_A 97 -HGTLTFVLIPS 107 (113)
T ss_dssp -CEEEEEEEECC
T ss_pred -CCeEEEEEEEC
Confidence 67799999874
No 66
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.55 E-value=4.5e-14 Score=110.43 Aligned_cols=87 Identities=29% Similarity=0.458 Sum_probs=78.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.++ ..+|||++.++.+ ....++||..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 24 ~~~~~v~l~k~-~~glG~~l~~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-- 99 (124)
T 2daz_A 24 GELHIIELEKD-KNGLGLSLAGNKD-RSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA-- 99 (124)
T ss_dssp SEEEEEEEECC-SSCCCEEEECBSS-TTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS--
T ss_pred CceEEEEEEeC-CCccCEEEeccCC-CCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 47789999987 5889999999865 2357999999999999999999999999999999999999999999999988
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.|.|+|.|.
T Consensus 100 -~~~v~l~v~R~ 110 (124)
T 2daz_A 100 -PSKVKLVFIRN 110 (124)
T ss_dssp -CSEEEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 67899999984
No 67
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.55 E-value=1.4e-14 Score=114.14 Aligned_cols=91 Identities=21% Similarity=0.252 Sum_probs=78.3
Q ss_pred CccceEEEEEEcCC-CCcccEEEEcccCC-------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHH
Q psy18026 32 MSLNIITVTLNMDT-VNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 32 ~~~~i~~V~L~k~~-~~~LG~sI~gg~~~-------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
....+.+|.|.+.. +.+|||+|.++.+. ....++||..|.+||+|+++|+|++||+|++|||..+.++++++
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 33578889999875 58899999987531 01358999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~ 125 (246)
++.+|+.. ++.|.|+|.+.
T Consensus 106 ~~~~l~~~---~~~v~l~v~r~ 124 (128)
T 1nf3_C 106 VTDMMIAN---SRNLIITVRPA 124 (128)
T ss_dssp HHHHHHHT---TTSEEEEEECC
T ss_pred HHHHHHcC---CCeEEEEEEEC
Confidence 99999987 67799999874
No 68
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.55 E-value=3.1e-14 Score=106.55 Aligned_cols=85 Identities=20% Similarity=0.358 Sum_probs=77.1
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.++.++|.|.++...+|||.+.+. ..+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~- 79 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA- 79 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC-----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-
T ss_pred HCceEEEEEEeCCCCCccEEEEeC-----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 367889999987788999999872 67899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
++.|.|+|.|.
T Consensus 80 --~~~v~l~v~R~ 90 (96)
T 2qkv_A 80 --NGKVSMEVTRP 90 (96)
T ss_dssp --SSEEEEEEECC
T ss_pred --CCcEEEEEEeC
Confidence 67899999973
No 69
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.55 E-value=4.5e-14 Score=105.45 Aligned_cols=87 Identities=21% Similarity=0.321 Sum_probs=75.0
Q ss_pred cceEEEEEEcCCCCcccEEEEc-cc----CCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVG-QS----NKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~g-g~----~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
.+.++|.|.+....+|||+|.+ +. +.....+++|..|.++|+|+++| |++||+|++|||..+.+++++++.++|
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567899999887899999997 11 11235689999999999999999 999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEe
Q psy18026 109 REVVQKPGPIKLVVAK 124 (246)
Q Consensus 109 r~~~~~~~~V~L~V~r 124 (246)
+.. ++.|.|+|.+
T Consensus 82 ~~~---~~~v~l~v~~ 94 (96)
T 2ego_A 82 KAS---GNVLRLETLY 94 (96)
T ss_dssp HHT---TTEEEEEEEC
T ss_pred HhC---CCeEEEEEEE
Confidence 987 6689999875
No 70
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=3.7e-14 Score=108.04 Aligned_cols=89 Identities=37% Similarity=0.579 Sum_probs=79.0
Q ss_pred cceEEEEEEcCCCCcccEEEE-----cccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIV-----GQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~-----gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
.+.++|+|.++. .+|||+|. |+.+. ..+.++||..|.++|+|+++|+|++||+|++|||..+.++++.+++.+
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 578899999874 88999999 76653 235799999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEecC
Q psy18026 108 LREVVQKPGPIKLVVAKCW 126 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~~ 126 (246)
++.. +..|.|+|.|..
T Consensus 87 ~~~~---g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNT---GQVVHLLLEKGQ 102 (108)
T ss_dssp HHHT---TSEEEEEEECCC
T ss_pred HHcC---CCeEEEEEEeCC
Confidence 9987 778999999843
No 71
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.55 E-value=2.6e-14 Score=109.71 Aligned_cols=88 Identities=30% Similarity=0.563 Sum_probs=77.8
Q ss_pred cceEEEEEEcCCCCcccEEEEc---ccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
++.++|.|.++. .+|||++.+ +.+. ....++||..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++
T Consensus 3 ~~~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (113)
T 2g5m_B 3 MELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 81 (113)
T ss_dssp CEEEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred eEEEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 578889998765 889999998 3332 23679999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy18026 110 EVVQKPGPIKLVVAKC 125 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (246)
.. +..|.|+|.|.
T Consensus 82 ~~---g~~v~l~v~R~ 94 (113)
T 2g5m_B 82 NT---KGRVRFMIGRE 94 (113)
T ss_dssp HS---CSSCEEEEEEC
T ss_pred cC---CCeEEEEEEeC
Confidence 87 77899999984
No 72
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=8.8e-14 Score=107.11 Aligned_cols=92 Identities=24% Similarity=0.335 Sum_probs=78.6
Q ss_pred CCCccceEEEEEEcCCCCcccEEEEcccCCC--C---CCCeEEEEecCCChhhh-cCCCCCCCEEEEECCeecccCCHHH
Q psy18026 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNKG--G---DGGIYVGSIMKGGAVAL-DGRIEPGDMILQVNDINFENMSNDE 103 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~--~---~~gi~I~~V~~gg~A~~-~GrL~~GD~Il~VNg~~~~~~s~~e 103 (246)
+...++.++|.|.++...+|||+|.++.+.. + ..+++|..|.++|+|++ +| |++||+|++|||+.+.++++++
T Consensus 5 ~~~~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~ 83 (114)
T 1uew_A 5 SSGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHAD 83 (114)
T ss_dssp CSCCCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHH
T ss_pred CCCcccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHH
Confidence 3445788899999887789999999875431 1 12679999999999999 66 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy18026 104 AVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 104 av~lLr~~~~~~~~V~L~V~r~ 125 (246)
++++|+.. +..|.|+|.|.
T Consensus 84 ~~~~l~~~---g~~v~l~v~r~ 102 (114)
T 1uew_A 84 IVKLIKDA---GLSVTLRIIPQ 102 (114)
T ss_dssp HHHHHHHT---TTEEEEEECCC
T ss_pred HHHHHHcC---CCeEEEEEEeC
Confidence 99999985 77899999984
No 73
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.55 E-value=7.4e-14 Score=101.66 Aligned_cols=84 Identities=25% Similarity=0.470 Sum_probs=72.2
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
++|+|.++. .+|||.+.++.+ ...+++|..|.+||+|+++|+|++||+|++|||..+.+++++++.++|+.... +.
T Consensus 2 ~~v~l~k~~-~g~G~~i~~~~~--~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-g~ 77 (85)
T 2i04_A 2 IHTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPI-GA 77 (85)
T ss_dssp EEEEEECBT-TBSSEEEEECCS--TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCT-TC
T ss_pred EEEEEEECC-CCCCEEEEcccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-CC
Confidence 578888775 789999998654 36789999999999999999999999999999999999999999999998621 34
Q ss_pred cEEEEEEe
Q psy18026 117 PIKLVVAK 124 (246)
Q Consensus 117 ~V~L~V~r 124 (246)
.+.|+|.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 58888864
No 74
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.54 E-value=1e-13 Score=105.27 Aligned_cols=91 Identities=26% Similarity=0.399 Sum_probs=79.3
Q ss_pred CCCccceEEEEEEcCCCCcccEEEEcccCC----CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHH
Q psy18026 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav 105 (246)
+.+.++.++|.|.++.+.+|||++.++.+. ..+.+++|..|.+||+|+ .| |++||+|++|||..+.++++.+++
T Consensus 2 s~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~ 79 (107)
T 2h2b_A 2 SHMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAV 79 (107)
T ss_dssp CCCCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHH
Confidence 346688999999999889999999987653 135699999999999999 66 999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEec
Q psy18026 106 RVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 106 ~lLr~~~~~~~~V~L~V~r~ 125 (246)
..++.. +..+.|+|.|.
T Consensus 80 ~~~~~~---g~~v~l~v~R~ 96 (107)
T 2h2b_A 80 QQLRKS---GKNAKITIRRK 96 (107)
T ss_dssp HHHHTC---CSEEEEEEEEE
T ss_pred HHhhCC---CCEEEEEEEEC
Confidence 888866 67799999884
No 75
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.54 E-value=8.1e-14 Score=102.73 Aligned_cols=82 Identities=22% Similarity=0.349 Sum_probs=72.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+..+|.|.++. .+|||++.++.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 3 ~~r~v~l~r~~-~g~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 74 (91)
T 1g9o_A 3 LPRLCCLEKGP-NGYGFHLHGEKG---KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA--- 74 (91)
T ss_dssp CCEEEEEECBT-TBCCEEEEECTT---CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---
T ss_pred ccEEEEEEeCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 45688999886 689999999764 6799999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
++.+.+++.+
T Consensus 75 ~~~~~~~~~~ 84 (91)
T 1g9o_A 75 LNAVRLLVVD 84 (91)
T ss_dssp SSEEEEEEEC
T ss_pred CCcEEEEEEc
Confidence 6776666654
No 76
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.54 E-value=1.4e-13 Score=102.73 Aligned_cols=86 Identities=35% Similarity=0.543 Sum_probs=75.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.++|.|.++ ..+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 4 ~~~~v~l~~~-~~~lG~~l~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 78 (98)
T 2opg_A 4 CETTIEISKG-RTGLGLSIVGGSDT-LLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT--- 78 (98)
T ss_dssp EEEEEEEECB-TTBTCEEEEECTTS-TTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---
T ss_pred CEEEEEEEEC-CCcccEEEecCCCC-CCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 4567889877 58899999987652 226999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 79 ~~~v~l~v~R~ 89 (98)
T 2opg_A 79 PQRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEcC
Confidence 67799999884
No 77
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.53 E-value=8.1e-14 Score=102.62 Aligned_cols=82 Identities=21% Similarity=0.330 Sum_probs=74.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+..+|.|.++. .+|||.+.++.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++++|+..
T Consensus 4 ~~r~v~l~k~~-~g~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 75 (90)
T 2he4_A 4 RPRLCHLRKGP-QGYGFNLHSDKS---RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR--- 75 (90)
T ss_dssp CCEEEEEECBT-TBCCEEEEECSS---SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS---
T ss_pred CcEEEEEEECC-CCccEEEEccCC---CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 45678998876 789999998754 6799999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 76 ~~~v~l~v~r 85 (90)
T 2he4_A 76 EDEARLLVVG 85 (90)
T ss_dssp SSEEEEEEEC
T ss_pred CCcEEEEEEc
Confidence 6789999987
No 78
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.53 E-value=8.6e-14 Score=107.02 Aligned_cols=85 Identities=22% Similarity=0.418 Sum_probs=76.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|.|.++. .+|||++.++.+ ...+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 23 ~~~~~v~l~~~~-~glG~~l~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-- 97 (112)
T 2r4h_A 23 MDFYTVELERGA-KGFGFSLRGGRE--YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG-- 97 (112)
T ss_dssp CCEEEEEEECBT-TBTSEEEEECGG--GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT--
T ss_pred CceEEEEEEcCC-CccCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 467889998775 789999998764 367999999999999999999999999999999999999999999999886
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
+..|.|+|.|
T Consensus 98 -g~~v~l~v~R 107 (112)
T 2r4h_A 98 -GRRVRLFLKR 107 (112)
T ss_dssp -TTEEEEEEEC
T ss_pred -CCeEEEEEEe
Confidence 6779999987
No 79
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.53 E-value=6e-14 Score=123.82 Aligned_cols=87 Identities=31% Similarity=0.354 Sum_probs=79.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.|+.+.+|||+|.|+.+ .+.++||..|.+||+|++++.|++||+|++|||+++.+++|++++.+|+..
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d--~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-- 151 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-- 151 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETT--TTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC--
T ss_pred CccEEEEEEeCCCCCEeEEEeeccC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC--
Confidence 4688999999878999999999876 367999999999999999655999999999999999999999999999998
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.|+|+|.|.
T Consensus 152 -g~~V~L~V~R~ 162 (263)
T 1z87_A 152 -GKEVVLEVKYM 162 (263)
T ss_dssp -CSCCCEEEECC
T ss_pred -CCeEEEEEEeC
Confidence 77799999984
No 80
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.53 E-value=5.7e-14 Score=102.93 Aligned_cols=83 Identities=20% Similarity=0.384 Sum_probs=73.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|.|. + ..+|||++.++.+ ...+++|..|.++|+|+++| |++||+|++|||..+.+++++++..+++..
T Consensus 2 ~~~~~v~l~-~-~~~~G~~l~~g~~--~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 74 (88)
T 2uzc_A 2 MSNYSVSLV-G-PAPWGFRLQGGKD--FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC-- 74 (88)
T ss_dssp CCEEEEEEE-S-SSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CcEEEEEEc-C-CCcccEEEECcCC--CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 456778883 3 4789999999875 36789999999999999999 999999999999999999999999999876
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 75 -g~~v~l~v~R 84 (88)
T 2uzc_A 75 -TGSLNMTLQR 84 (88)
T ss_dssp -CSEEEEEEEC
T ss_pred -CCeEEEEEEe
Confidence 6779999987
No 81
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.53 E-value=7.8e-14 Score=102.51 Aligned_cols=84 Identities=19% Similarity=0.315 Sum_probs=73.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
++.++|++.. ..+|||++.++.+ ...+++|..|.++|+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 2 ~~~~~v~~~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 74 (89)
T 2q3g_A 2 MDSFKVVLEG--PAPWGFRLQGGKD--FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC-- 74 (89)
T ss_dssp EEEEEEEEES--SSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC--
T ss_pred ccEEEEEEcC--CCcccEEEECcCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 4667777763 4789999999765 36789999999999999999 999999999999999999999999999887
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 75 -g~~v~l~v~R~ 85 (89)
T 2q3g_A 75 -GERLSLGLSRA 85 (89)
T ss_dssp -TTEEEEEEEEE
T ss_pred -CCEEEEEEEeC
Confidence 66799999873
No 82
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2.2e-14 Score=108.03 Aligned_cols=86 Identities=21% Similarity=0.410 Sum_probs=76.2
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.+++.|.++. .+|||.+.++.+ ...+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 10 ~~~~~v~l~~~~-~g~G~~~~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 84 (103)
T 1wfv_A 10 FDYFTVDMEKGA-KGFGFSIRGGRE--YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG-- 84 (103)
T ss_dssp SCCEECCEECCT-TSSSBCCEEETT--TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH--
T ss_pred ceEEEEEEecCC-CcCCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 677788888764 779999998765 255899999999999999999999999999999999999999999999976
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 85 -g~~v~l~v~R~ 95 (103)
T 1wfv_A 85 -GRRVRLLLKRG 95 (103)
T ss_dssp -CSEECEEEECT
T ss_pred -CCeEEEEEEEC
Confidence 67799999884
No 83
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=1.2e-13 Score=102.17 Aligned_cols=81 Identities=23% Similarity=0.356 Sum_probs=72.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+..+|.|.++. .+|||.+.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++++++..
T Consensus 2 ~~~r~v~l~~~~-~g~G~~l~~------~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 71 (91)
T 2f5y_A 2 MRYRQITIPRGK-DGFGFTICC------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC-- 71 (91)
T ss_dssp CEEEEEEEECBT-TBTSEEEEC------SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CceEEEEEEeCC-CCccEEEec------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 467789998875 789999987 4579999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
++.+.|+|.|.
T Consensus 72 -~~~v~l~v~R~ 82 (91)
T 2f5y_A 72 -PSEIILLVWRM 82 (91)
T ss_dssp -SSEEEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 66799999984
No 84
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.52 E-value=8.6e-14 Score=101.86 Aligned_cols=82 Identities=24% Similarity=0.417 Sum_probs=72.1
Q ss_pred EEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCc
Q psy18026 38 TVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGP 117 (246)
Q Consensus 38 ~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~ 117 (246)
++++++....+|||.+.++.+ ...+++|..|.++|||+++| |++||+|++|||..+.+++++++.++|+.. ...
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~ 76 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRD--FHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQS---PSP 76 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGG--GTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTC---CSS
T ss_pred EEEEEECCCCccCEEEecccC--CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCe
Confidence 455555566889999999765 25799999999999999999 999999999999999999999999999987 577
Q ss_pred EEEEEEec
Q psy18026 118 IKLVVAKC 125 (246)
Q Consensus 118 V~L~V~r~ 125 (246)
+.|+|.|.
T Consensus 77 v~l~v~R~ 84 (87)
T 2pa1_A 77 LRLQLDRI 84 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999983
No 85
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.52 E-value=1.6e-13 Score=104.67 Aligned_cols=87 Identities=21% Similarity=0.297 Sum_probs=75.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCC----------CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHH
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKG----------GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEA 104 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~----------~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~ea 104 (246)
+..+|.|.++...+|||+|.++.+.. ...+++|..|.+||+|+++| |++||+|++|||..+.+++|+++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 56688998777889999999976521 12379999999999999999 99999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEEEec
Q psy18026 105 VRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 105 v~lLr~~~~~~~~V~L~V~r~ 125 (246)
+++++.. +..+.|+|.+.
T Consensus 86 ~~~l~~~---~~~v~l~v~~~ 103 (109)
T 1q3o_A 86 VNMIRQG---GNTLMVKVVMV 103 (109)
T ss_dssp HHHHHHT---TTEEEEEEEEE
T ss_pred HHHHHhC---CCEEEEEEEEC
Confidence 9999987 67799999874
No 86
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.52 E-value=3.7e-14 Score=108.51 Aligned_cols=95 Identities=29% Similarity=0.450 Sum_probs=82.8
Q ss_pred CCCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHH
Q psy18026 23 SFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSND 102 (246)
Q Consensus 23 s~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~ 102 (246)
+.++........+.++|.|.+.. .+|||.+.++.+ ..+++|..|.++++|+++|+|++||+|++|||+.+.++++.
T Consensus 3 ~~s~~~~~~~~~~~~~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~ 78 (113)
T 1um7_A 3 SGSSGRPGGDAREPRKIILHKGS-TGLGFNIVGGED---GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHE 78 (113)
T ss_dssp CCCCCCCCCCCCSEEEEEEECCS-SCSSBCCBCCST---TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHH
T ss_pred CCCCCCCCcCCCceEEEEEEECC-CcccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 44555555666789999999874 789999998754 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEEEe
Q psy18026 103 EAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 103 eav~lLr~~~~~~~~V~L~V~r 124 (246)
+++.+++.. +..+.|+|.+
T Consensus 79 ~~~~~~~~~---~~~v~l~v~r 97 (113)
T 1um7_A 79 QAAAALKRA---GQSVTIVAQY 97 (113)
T ss_dssp HHHHHHHSC---CSEEEEEEEC
T ss_pred HHHHHHHhC---CCcEEEEEEE
Confidence 999999876 6779999987
No 87
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.52 E-value=1.2e-13 Score=103.98 Aligned_cols=89 Identities=27% Similarity=0.525 Sum_probs=74.8
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCC-------CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKG-------GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVR 106 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~-------~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~ 106 (246)
++.++|.|.+.....|||.+.++.+.. ...+++|..|.+||+|+++|+|++||+|++|||..+.+++++++++
T Consensus 3 ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 3 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp CSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 466889999887788999999865421 1368999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEEEec
Q psy18026 107 VLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 107 lLr~~~~~~~~V~L~V~r~ 125 (246)
+|+.. ++.+.|+|.|.
T Consensus 83 ~l~~~---~~~v~l~v~r~ 98 (103)
T 2fcf_A 83 AIRKA---GNPVVFMVQSI 98 (103)
T ss_dssp HHHTC---CSSEEEEEECC
T ss_pred HHHhC---CCcEEEEEEEC
Confidence 99987 66899999873
No 88
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.51 E-value=6.6e-13 Score=101.39 Aligned_cols=90 Identities=31% Similarity=0.538 Sum_probs=76.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.+.+++.|.++ ..+|||++.++.+. ....+++|..|.+||+|+++|+|++||+|++|||..+.++++++++++|+...
T Consensus 10 ~~~~~~~l~~~-~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 10 GKRLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp CEEEEEEEECB-TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CcEEEEEEEEC-CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 57778888876 48899999987542 22478999999999999999999999999999999999999999999999751
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
. +..|.|+|.|.
T Consensus 89 ~-g~~v~l~v~R~ 100 (111)
T 2koj_A 89 M-EGTVSLLVFRQ 100 (111)
T ss_dssp C-SSEEEEEEEEC
T ss_pred C-CCeEEEEEEeC
Confidence 1 35699999984
No 89
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.50 E-value=3.2e-13 Score=102.49 Aligned_cols=86 Identities=27% Similarity=0.411 Sum_probs=74.0
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCC----------CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHH
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGG----------DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEA 104 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~----------~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~ea 104 (246)
+.++|.|.++. .+|||++.++.+..+ ..++||..|.++|+|+++| |++||+|++|||..+.+++++++
T Consensus 6 ~~r~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp CCEEEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 56788999886 589999999754211 3445799999999999999 99999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEEEec
Q psy18026 105 VRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 105 v~lLr~~~~~~~~V~L~V~r~ 125 (246)
+.+|+.. +..+.|+|.|.
T Consensus 84 ~~~l~~~---g~~v~l~v~r~ 101 (107)
T 3qe1_A 84 VDLIRAG---EKELILTVLSV 101 (107)
T ss_dssp HHHHHHC---SSEEEEEEECS
T ss_pred HHHHHcC---CCEEEEEEEcC
Confidence 9999986 67799999984
No 90
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=1.9e-13 Score=106.21 Aligned_cols=88 Identities=24% Similarity=0.381 Sum_probs=72.6
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC-
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ- 113 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~- 113 (246)
.+..+.+.+. .+|||+|.|+.+. ..+.++|..|.+||+|+++|.|++||+|++|||..+.+++|++++++|+....
T Consensus 18 ~~~~~~~~~~--~glG~~i~gg~~~-~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 18 DVRLLRIKKE--GSLDLALEGGVDS-PVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CEEEEEEESC--SCCCCEEEEBTTS-SSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred eEEEEEECCC--CccCEEEEcccCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 4556666654 4899999998763 33569999999999999996699999999999999999999999999987621
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
.+..|+|+|.|+
T Consensus 95 ~g~~v~l~v~r~ 106 (118)
T 1v6b_A 95 GGDWIDLVVAVC 106 (118)
T ss_dssp TCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 134699999984
No 91
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.50 E-value=1.8e-13 Score=101.98 Aligned_cols=87 Identities=16% Similarity=0.259 Sum_probs=75.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
...++|.|.++. .+|||++.+..+.....+++|..|.++|+|+++| |++||+|++|||..+.++++++++++|+..
T Consensus 2 ~~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 77 (96)
T 2v90_A 2 MKPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ-- 77 (96)
T ss_dssp CCCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT--
T ss_pred CCCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356789999876 6999999985432235689999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 78 -g~~v~l~v~r~ 88 (96)
T 2v90_A 78 -GSCVSLTVVDP 88 (96)
T ss_dssp -TTEEEEEEECC
T ss_pred -CCEEEEEEECC
Confidence 67799999983
No 92
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=4.3e-13 Score=104.61 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=80.5
Q ss_pred CCCccceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
.....+.++|.|+++...+|||.|.++... ....+++|..|.++++|+++|+|++||+|++|||+.+.++++++++++
T Consensus 10 ~~~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 10 QVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp CCCCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred ccccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344568899999988789999999986321 135779999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy18026 108 LREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (246)
|+.... +..|.|+|.|.
T Consensus 90 l~~~~~-g~~v~l~v~R~ 106 (122)
T 1v5q_A 90 LRDSSI-TSKVTLEIEFD 106 (122)
T ss_dssp HHHHTT-TTCEEEEEEEE
T ss_pred HHhCCC-CCeEEEEEEEC
Confidence 998720 24699999984
No 93
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=100.85 Aligned_cols=77 Identities=30% Similarity=0.481 Sum_probs=68.2
Q ss_pred EEEEEEc-CCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 37 ITVTLNM-DTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 37 ~~V~L~k-~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
+.|.|.+ .....|||.+.+ ++||..|.+||+|+++|+|++||+|++|||.++.++++++++++|+.+ +
T Consensus 2 l~v~l~~~~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~---~ 70 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS---R 70 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT---T
T ss_pred eEEEEEeCCCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---C
Confidence 3466664 345679999854 699999999999999999999999999999999999999999999998 7
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
+.|.|+|.+
T Consensus 71 ~~v~L~v~~ 79 (88)
T 3e17_A 71 GKLQLVVLR 79 (88)
T ss_dssp TEEEEEECC
T ss_pred CeEEEEEeC
Confidence 889999986
No 94
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=6.6e-14 Score=103.89 Aligned_cols=82 Identities=23% Similarity=0.368 Sum_probs=73.8
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
.+++|.|.+....+|||++.+. ..+++|..|.++|+|+++|.|++||+|++|||..+ +.++++++++|+..
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~-----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~--- 76 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE-----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA--- 76 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES-----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC---
T ss_pred CcEEEEEEECCCCcEeEEEEec-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC---
Confidence 4567888887788999999983 67999999999999999988999999999999999 99999999999986
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
++.|.|+|.+.
T Consensus 77 ~~~v~l~v~~~ 87 (91)
T 2e7k_A 77 SGSVILKILSG 87 (91)
T ss_dssp CSSBCEEEECC
T ss_pred CCeEEEEEEEC
Confidence 67899999874
No 95
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.49 E-value=1.9e-13 Score=103.62 Aligned_cols=81 Identities=17% Similarity=0.302 Sum_probs=74.3
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
.+|.|.+..+.+|||.+..+.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++.+++.. +.
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~ 75 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS---GN 75 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTT---CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHT---TT
T ss_pred EEEEEEeCCCCeeCEEEEEEeC---CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CC
Confidence 5788998888899999998765 6789999999999999999 999999999999999999999999999976 67
Q ss_pred cEEEEEEe
Q psy18026 117 PIKLVVAK 124 (246)
Q Consensus 117 ~V~L~V~r 124 (246)
.|.|+|.|
T Consensus 76 ~v~l~v~r 83 (106)
T 3ngh_A 76 SVTLLVLD 83 (106)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 89999987
No 96
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.49 E-value=2.8e-13 Score=100.65 Aligned_cols=83 Identities=30% Similarity=0.514 Sum_probs=71.1
Q ss_pred eEEEEEEcCCCCcccEEEEcccCC------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
.++|.+.++ .+|||+|.|+.+. ..+.+++|..|.++|+|++ | |++||+|++|||..+.++++.+++..++
T Consensus 4 ~~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 4 EIRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 356777765 4899999997641 2367999999999999999 7 9999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy18026 110 EVVQKPGPIKLVVAKC 125 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (246)
.. +..+.|+|.|.
T Consensus 80 ~~---~~~v~l~v~R~ 92 (95)
T 1mfg_A 80 TF---QNTVELIIVRE 92 (95)
T ss_dssp HC---CSEEEEEEEEE
T ss_pred cC---CCeEEEEEEeC
Confidence 76 67799999883
No 97
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.49 E-value=3.3e-13 Score=111.72 Aligned_cols=91 Identities=32% Similarity=0.502 Sum_probs=80.4
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCCC---CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
.+++..+|+|.++. .+|||+|.++.+.. .+.++||..|.+||+|+++|+|++||+|++|||..+.++++.+++.++
T Consensus 2 ~~~~~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (196)
T 3gsl_A 2 GSMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 80 (196)
T ss_dssp -CEEEEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcEEEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35788899999874 78999999987642 267999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEecC
Q psy18026 109 REVVQKPGPIKLVVAKCW 126 (246)
Q Consensus 109 r~~~~~~~~V~L~V~r~~ 126 (246)
+.. +..+.|+|.|..
T Consensus 81 ~~~---g~~v~l~v~r~~ 95 (196)
T 3gsl_A 81 KEA---GSIVRLYVMRRK 95 (196)
T ss_dssp HTS---CSEEEEEEEEEC
T ss_pred HhC---CCcEEEEEEecC
Confidence 987 677999998843
No 98
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.49 E-value=2.7e-13 Score=104.40 Aligned_cols=90 Identities=17% Similarity=0.292 Sum_probs=80.0
Q ss_pred CCCCCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 28 TDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 28 ~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
......++.+++.|+++....|||.+.++.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++++
T Consensus 6 ~~~~~~ldp~~~~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 81 (114)
T 2edz_A 6 SGMASTFNPRECKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVEL 81 (114)
T ss_dssp CCCCCCCCCEEEEEECCTTCCCSCEEECCTT---CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHH
T ss_pred hhHhhcCCCEEEEEeCCCCCcccEEEEEecC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3334456889999999888899999998654 6899999999999999999 99999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEe
Q psy18026 108 LREVVQKPGPIKLVVAK 124 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r 124 (246)
++.. +..|.|+|.|
T Consensus 82 l~~~---g~~v~l~v~R 95 (114)
T 2edz_A 82 VRKS---GNSVTLLVLD 95 (114)
T ss_dssp HHHT---CSEEEEEEEC
T ss_pred HHcC---CCEEEEEEEE
Confidence 9986 6779999987
No 99
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.48 E-value=5.7e-13 Score=99.16 Aligned_cols=87 Identities=30% Similarity=0.510 Sum_probs=75.8
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC----CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr 109 (246)
++.+++.+.++ ..+|||++.++.+. ....+++|..|.++|||+++| |++||+|++|||..+.++++.+++..++
T Consensus 2 ~~~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 2 MEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp -CEEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 56778899887 68999999987652 136899999999999999999 9999999999999999999999998888
Q ss_pred hccCCCCcEEEEEEec
Q psy18026 110 EVVQKPGPIKLVVAKC 125 (246)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (246)
.. +..+.|+|.|.
T Consensus 80 ~~---g~~v~l~v~R~ 92 (97)
T 2w4f_A 80 GA---GTAVQMRVWRE 92 (97)
T ss_dssp TS---CSEEEEEEECC
T ss_pred CC---CCeEEEEEEeC
Confidence 76 77899999984
No 100
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.48 E-value=4.3e-13 Score=104.06 Aligned_cols=84 Identities=19% Similarity=0.269 Sum_probs=69.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|+|.|+. .+|||+|.++ ..+.+|..|.+ +++. +.|++||.|++|||.++.+++|+|++++|+++..
T Consensus 11 ~~~~~V~L~Kg~-~G~GFsI~~~-----~~g~~V~~I~~--~~~~-aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 11 GLLVTIPLIKGP-KGFGFAIADS-----PTGQKVKMILD--SQWC-QGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp CEEEEEEEECBT-TBSSEEEEEE-----TTEEEEEEESC--GGGS-TTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCEEEEEEEECC-CcccEEEeCC-----CCCcEEEEecC--hHHh-CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 478999999984 7999999764 45778999998 3444 4599999999999999999999999999998721
Q ss_pred CCCcEEEEEEecCC
Q psy18026 114 KPGPIKLVVAKCWD 127 (246)
Q Consensus 114 ~~~~V~L~V~r~~~ 127 (246)
+..|.|+|.|...
T Consensus 82 -G~~v~L~V~R~g~ 94 (113)
T 3soe_A 82 -GADVPLLILRGGP 94 (113)
T ss_dssp -TCEEEEEEEESSC
T ss_pred -CCEEEEEEEECCc
Confidence 3469999999543
No 101
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.48 E-value=4e-13 Score=101.18 Aligned_cols=84 Identities=19% Similarity=0.292 Sum_probs=74.9
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
....+|.|.++. .+|||.+.++.+ ..+++|..|.++|+|+++| |++||+|++|||..+.++++++++++|+..
T Consensus 5 ~~~r~v~l~k~~-~g~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 77 (102)
T 2d90_A 5 SSGRVVVIKKGS-NGYGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG-- 77 (102)
T ss_dssp SSSEEEEEECCS-SSSSCEEEECSS---SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS--
T ss_pred CCCEEEEEeeCC-CCccEEEEeecC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 456789999875 789999998654 6799999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 78 -g~~v~l~v~r~ 88 (102)
T 2d90_A 78 -GDQTTLLVLDK 88 (102)
T ss_dssp -TTEEEEEECST
T ss_pred -CCEEEEEEEEC
Confidence 67899999873
No 102
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.48 E-value=4.6e-13 Score=103.55 Aligned_cols=85 Identities=29% Similarity=0.421 Sum_probs=75.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
...+|.|.++...+|||.+.++.+ ...+++|..|.+||+|+++|+|++||+|++|||..+.+.++++++++|+..
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~--~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--- 98 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV--- 98 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---
T ss_pred CCEEEEEEECCCCcEeEEEEeCCC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 567899998887789999998764 246899999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
++.|.|+|.+
T Consensus 99 ~~~v~l~v~~ 108 (114)
T 2gzv_A 99 KGEVTIHYNK 108 (114)
T ss_dssp CSEEEEEEEC
T ss_pred CCeEEEEEEe
Confidence 6679999876
No 103
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.47 E-value=2.1e-13 Score=102.98 Aligned_cols=87 Identities=29% Similarity=0.504 Sum_probs=74.8
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCC------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHH
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav 105 (246)
+..+.++|.+.++. +|||++.++.+. ..+.+++|..|.++|+|++ | |++||+|++|||..+.++++.+++
T Consensus 8 ~~~~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~ 83 (103)
T 1n7t_A 8 LAKQEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAV 83 (103)
T ss_dssp SSCCCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHH
T ss_pred cccEEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHH
Confidence 34567788888764 899999997641 1467999999999999999 7 999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEec
Q psy18026 106 RVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 106 ~lLr~~~~~~~~V~L~V~r~ 125 (246)
..++.. +..+.|+|.|.
T Consensus 84 ~~~~~~---g~~v~l~v~R~ 100 (103)
T 1n7t_A 84 SLLKTF---QNTVELIIVRE 100 (103)
T ss_dssp HHHHHC---CSEEEEEEECC
T ss_pred HHhhcC---CCeEEEEEEec
Confidence 999976 67799999873
No 104
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.47 E-value=6.5e-13 Score=98.48 Aligned_cols=88 Identities=36% Similarity=0.524 Sum_probs=75.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
.+.++|.|.++ ..+|||.+.++.+. ....+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 3 ~~~~~v~l~~~-~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 3 SETFDVELTKN-VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEEECB-TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEecC-CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56788888765 58899999986432 1367999999999999999999999999999999999999999999999876
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 82 ---~~~v~l~v~r~ 92 (97)
T 2iwn_A 82 ---GQTVLLTLMRR 92 (97)
T ss_dssp ---CSEEEEEEEEE
T ss_pred ---CCeEEEEEEeC
Confidence 67799999873
No 105
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.47 E-value=2.9e-13 Score=100.37 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=71.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+..+|.|.++. .+|||.+.++.+ ..+++|..|.+||+|+++| |++||+|++|||..+.+++|++++++|+..
T Consensus 5 ~~r~v~l~~~~-~~~G~~l~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 76 (95)
T 3r68_A 5 QPRVVVIKKGS-NGYGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG--- 76 (95)
T ss_dssp CCEEEEEECBT-TBCSCEEEEC-----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred CcEEEEEecCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 34578888764 889999998654 4699999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
++.+.|++.+
T Consensus 77 ~~~~~~~~~r 86 (95)
T 3r68_A 77 GDQTTLLVLD 86 (95)
T ss_dssp TTEEEEEEEE
T ss_pred CCeEEEEEEC
Confidence 7788888776
No 106
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.47 E-value=2.2e-13 Score=103.11 Aligned_cols=85 Identities=14% Similarity=0.245 Sum_probs=72.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCC-----CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNK-----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-----~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
....+|.|.+....+|||.|.+.... ....+++|..|.++|+|+++| |++||+|++|||+.+.++++++++++|
T Consensus 14 ~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l 92 (104)
T 2z17_A 14 SQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLI 92 (104)
T ss_dssp SCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHH
T ss_pred CcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 45567788888778899999983211 235799999999999999999 999999999999999999999999999
Q ss_pred HhccCCCCcEEEEE
Q psy18026 109 REVVQKPGPIKLVV 122 (246)
Q Consensus 109 r~~~~~~~~V~L~V 122 (246)
+.. ++.|.|+|
T Consensus 93 ~~~---~~~v~l~v 103 (104)
T 2z17_A 93 RSS---GNLLTIET 103 (104)
T ss_dssp HHT---TTEEEEEC
T ss_pred HhC---CCcEEEEE
Confidence 987 66788775
No 107
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.47 E-value=7.3e-13 Score=101.31 Aligned_cols=86 Identities=29% Similarity=0.479 Sum_probs=75.9
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
++++|.|.++.+.+|||.+.+..+ ..+++|..|.+||+|+++|.|++||.|++|||..+.+++++++.++|+.. .
T Consensus 1 n~~~v~l~~~~~~glG~~~~~~~~---~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 75 (112)
T 1qau_A 1 NVISVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI--A 75 (112)
T ss_dssp CEEEEEEECBTTTBTSEEEEECSS---SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHS--C
T ss_pred CEEEEEEEcCCCCceeEEEEecCC---CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 468899998878899999998653 67999999999999999994499999999999999999999999999885 1
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 76 g~~v~l~v~R~ 86 (112)
T 1qau_A 76 SETHVVLILRG 86 (112)
T ss_dssp SSSEEEEEEEC
T ss_pred CCcEEEEEEeC
Confidence 45699999983
No 108
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.47 E-value=1.2e-13 Score=102.05 Aligned_cols=83 Identities=22% Similarity=0.331 Sum_probs=72.9
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+..+|.|.++. .+|||.+.+..+ ..+++|..|.++|+|+++| |++||+|++|||..+.+++++++.++|+..
T Consensus 3 ~pr~v~l~k~~-~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 74 (91)
T 2vsp_A 3 KPKLCRLAKGE-NGYGFHLNAIRG---LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS--- 74 (91)
T ss_dssp CEEEEEEECBT-TBTSCCCBCCTT---CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS---
T ss_pred CcEEEEEEeCC-CcccEEEEeccC---CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 45789999886 589999988654 6789999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 75 g~~v~l~v~r~ 85 (91)
T 2vsp_A 75 GKNVTLLVCGK 85 (91)
T ss_dssp CSEEEEEEEC-
T ss_pred CCEEEEEEEeC
Confidence 67799999873
No 109
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.46 E-value=4.6e-13 Score=104.92 Aligned_cols=87 Identities=26% Similarity=0.502 Sum_probs=75.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCC-------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
+..+|.+.++...+|||.+.++.+. ....+++|..|.+||||+++|+|++||+|++|||..+.++++++++++
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4577888888778899999886432 124689999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEe
Q psy18026 108 LREVVQKPGPIKLVVAK 124 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r 124 (246)
|+.. ++.|.|+|.|
T Consensus 104 l~~~---~~~v~l~v~r 117 (123)
T 2iwq_A 104 IRKA---GNPVVFMVQS 117 (123)
T ss_dssp HHHC---CSSEEEEEEC
T ss_pred HHcC---CCeEEEEEEE
Confidence 9988 6789999987
No 110
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.46 E-value=2.8e-13 Score=98.43 Aligned_cols=81 Identities=20% Similarity=0.335 Sum_probs=70.5
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
.++|+|. + ..+|||++.++.+ ...+++|..|.++|+|+++| |++||+|++|||..+.++++.+++.+++.. +
T Consensus 2 ~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~ 73 (85)
T 1rgw_A 2 AYSVTLT-G-PGPWGFRLQGGKD--FNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSA---S 73 (85)
T ss_dssp EEEEEEC-C-SSCCCEEECCCGG--GTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTC---S
T ss_pred cEEEEEe-C-CCccCEEEEeccC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcC---C
Confidence 3567774 3 4789999998765 25689999999999999998 999999999999999999999999999877 6
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
+.+.|+|.|
T Consensus 74 ~~v~l~v~R 82 (85)
T 1rgw_A 74 YNLSLTLQK 82 (85)
T ss_dssp SCEEEEEES
T ss_pred CeEEEEEEe
Confidence 679999986
No 111
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.46 E-value=5e-13 Score=103.38 Aligned_cols=85 Identities=26% Similarity=0.512 Sum_probs=76.5
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
..+.++|.|.+.. .+|||.+.++.+ ..+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 12 ~~~~~~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 86 (119)
T 1tp5_A 12 PREPRRIVIHRGS-TGLGFNIVGGED---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA- 86 (119)
T ss_dssp CCSCEEEEEECTT-SCCCEEEEECGG---GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS-
T ss_pred CCccEEEEEEECC-CCccEEEecCCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3577889999875 679999998754 57999999999999999999999999999999999999999999999887
Q ss_pred CCCCcEEEEEEe
Q psy18026 113 QKPGPIKLVVAK 124 (246)
Q Consensus 113 ~~~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 87 --~~~v~l~v~r 96 (119)
T 1tp5_A 87 --GQTVTIIAQY 96 (119)
T ss_dssp --CSEEEEEEEE
T ss_pred --CCeEEEEEEE
Confidence 6779999987
No 112
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=3.6e-13 Score=102.02 Aligned_cols=84 Identities=19% Similarity=0.275 Sum_probs=75.1
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
....+|.|.++ ..+|||.+.+..+ ..++||..|.++|+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~r~v~l~k~-~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 79 (106)
T 2eei_A 7 GQPRLCYLVKE-GGSYGFSLKTVQG---KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS-- 79 (106)
T ss_dssp SSSEEEEEECC-SSSCSCCEECCSS---CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH--
T ss_pred CCCEEEEEEEC-CCCCCEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 45678899885 6889999988654 7899999999999999999 999999999999999999999999999887
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.+.
T Consensus 80 -~~~v~l~v~r~ 90 (106)
T 2eei_A 80 -GSRVMFLLVDK 90 (106)
T ss_dssp -CSEEEEEECCT
T ss_pred -CCeEEEEEEcC
Confidence 67799999873
No 113
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.45 E-value=2.2e-12 Score=100.55 Aligned_cols=98 Identities=30% Similarity=0.511 Sum_probs=79.6
Q ss_pred CCCCCCCCCCCCccceEEEEEEcCCCCcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccC
Q psy18026 21 TSSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENM 99 (246)
Q Consensus 21 ~ss~ss~~~~~~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~ 99 (246)
.++|.+..+ .+.+.|.|.+. ..+|||.+.++.+. .+..+++|..|.+||+|+++|+|++||+|++|||+.+.++
T Consensus 20 ~~~y~~~~~----~~~~~v~l~~~-~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~ 94 (121)
T 2kom_A 20 QGSYNTKKI----GKRLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGK 94 (121)
T ss_dssp -CCCCCCCS----CEEEEEEEECC-TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTS
T ss_pred cccccCccC----CeEEEEEEEcC-CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCC
Confidence 344555555 67788888865 57899999987542 2247899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 100 SNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 100 s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
++++++++|+.... +..|.|+|.|
T Consensus 95 ~~~~~~~~l~~~~~-g~~v~l~v~R 118 (121)
T 2kom_A 95 SQEEVVSLLRSTKM-EGTVSLLVFR 118 (121)
T ss_dssp CHHHHHHHHHHCCS-SCEEEEEEEE
T ss_pred CHHHHHHHHhcCCC-CCEEEEEEEe
Confidence 99999999997511 3569999987
No 114
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.44 E-value=8.6e-13 Score=96.67 Aligned_cols=84 Identities=25% Similarity=0.439 Sum_probs=69.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|+|.++. .+|||.+.+..+ ..+++|..+ ++|+|+ +| |++||.|++|||..+.++++++++++|+....
T Consensus 2 ~~~~~v~l~k~~-~g~G~~~~~~~~---~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 74 (88)
T 3bpu_A 2 MELITVHIVKGP-MGFGFTIADSPG---GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPK 74 (88)
T ss_dssp EEEEEEEEECBT-TBSSCEEEECTT---SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCT
T ss_pred CcEEEEEEEcCC-CceeEEEEecCC---CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC
Confidence 467899999875 889999998654 678999987 999999 77 99999999999999999999999999986311
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 75 -g~~v~l~v~R~ 85 (88)
T 3bpu_A 75 -GSEVTLLVQRQ 85 (88)
T ss_dssp -TCEEEEEEEEE
T ss_pred -CCEEEEEEEeC
Confidence 45699999873
No 115
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.6e-12 Score=97.61 Aligned_cols=87 Identities=28% Similarity=0.410 Sum_probs=76.1
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
....+++|.|.+.....|||.+.+..+ ...+++|..|.++++|+++| |++||+|++|||..+.++++++++..++.
T Consensus 7 ~~~~~~~v~l~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 82 (100)
T 2eeh_A 7 GSDIIHSVRVEKSPAGRLGFSVRGGSE--HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS- 82 (100)
T ss_dssp CCCEECCEEECCCSSSSCSEEEECCTT--TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-
T ss_pred CCCeEEEEEEEECCCCCccEEEEcccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-
Confidence 335677899998877779999998654 35799999999999999999 99999999999999999999999999985
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 83 ---~~~v~l~v~R~ 93 (100)
T 2eeh_A 83 ---SSRLHMMVRRM 93 (100)
T ss_dssp ---CSSEEEEEEEC
T ss_pred ---CCEEEEEEEEC
Confidence 46699999984
No 116
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.44 E-value=8.6e-13 Score=101.51 Aligned_cols=86 Identities=34% Similarity=0.545 Sum_probs=75.1
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.++|.|.++ ..+|||.+.++.+. ...+++|..|.+||+|+++|+|++||+|++|||+.+.++++++++.+++..
T Consensus 17 ~~~~v~l~~~-~~glG~~l~~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~--- 91 (116)
T 2dm8_A 17 QEMIIEISKG-RSGLGLSIVGGKDT-PLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT--- 91 (116)
T ss_dssp SCEEEEEECC-SSCCCCCCBCCTTS-SCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC---
T ss_pred CEEEEEEEEC-CCcccEEEeCCCCC-CcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 4577888876 48899999987652 126999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 92 ~~~v~l~v~R~ 102 (116)
T 2dm8_A 92 PQKVRLVVYRD 102 (116)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 67799999873
No 117
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=5.4e-13 Score=99.12 Aligned_cols=84 Identities=24% Similarity=0.293 Sum_probs=72.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
...++|.|. + ..+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 79 (94)
T 2eeg_A 7 GMPHSVTLR-G-PSPWGFRLVGGRD--FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC-- 79 (94)
T ss_dssp CCCEEEEEC-C-SSCCSCCEECCTT--TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC--
T ss_pred CceEEEEEe-C-CCccCEEEECccC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 345677774 3 3689999999876 36789999999999999999 999999999999999999999999999886
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 80 -g~~v~l~v~R~ 90 (94)
T 2eeg_A 80 -HDHLTLSVSSG 90 (94)
T ss_dssp -CSCEEEEEECC
T ss_pred -CCeEEEEEEeC
Confidence 66799999873
No 118
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.44 E-value=1.5e-13 Score=99.72 Aligned_cols=79 Identities=24% Similarity=0.517 Sum_probs=70.8
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.++|.|.++. .+|||.+.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++++++..
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~------~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 70 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSG------QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC--- 70 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCC------SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC---
T ss_pred CcEEEEEEeCC-CcccEEEEc------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 46789998875 789999876 4579999999999999999 999999999999999999999999999876
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
+..+.|+|.|
T Consensus 71 ~~~v~l~v~R 80 (83)
T 2kv8_A 71 SGVLHMVIAE 80 (83)
T ss_dssp SSCEEEEEEC
T ss_pred CCeEEEEEEc
Confidence 5679999987
No 119
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.43 E-value=9.8e-13 Score=98.25 Aligned_cols=83 Identities=19% Similarity=0.299 Sum_probs=71.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.....+.|.++. .+|||.+.++.+ ..+++|..|.++|+|+++| |++||+|++|||..+.+++++++.++|+..
T Consensus 8 ~~~~~~~l~~~~-~g~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 80 (98)
T 2jxo_A 8 LRPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-- 80 (98)
T ss_dssp SCCEEEEEECTT-TCCCEEEECCCS---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT--
T ss_pred CCcEEEEEEeCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 445667888764 789999998654 5699999999999999999 999999999999999999999999999987
Q ss_pred CCCc-EEEEEEe
Q psy18026 114 KPGP-IKLVVAK 124 (246)
Q Consensus 114 ~~~~-V~L~V~r 124 (246)
.+. +.|+|.|
T Consensus 81 -~~~~~~l~v~R 91 (98)
T 2jxo_A 81 -GDETKLLVVDR 91 (98)
T ss_dssp -TTEEEEEECCH
T ss_pred -CCcEEEEEEEC
Confidence 454 6687765
No 120
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=5.6e-13 Score=100.34 Aligned_cols=83 Identities=23% Similarity=0.332 Sum_probs=73.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
++.+.+.|.++. .+|||.+.+ ..+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+..
T Consensus 14 ~~~~~v~l~~~~-~g~G~~~~~------~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 83 (100)
T 1whd_A 14 GEKLQITIRRGK-DGFGFTICC------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC-- 83 (100)
T ss_dssp CEEEEEEEECCS-SSSSCBCCC------SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred cceEEEEEECCC-CeeeEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 677888888764 789999876 4679999999999999999 999999999999999999999999999987
Q ss_pred CCCcEEEEEEecCC
Q psy18026 114 KPGPIKLVVAKCWD 127 (246)
Q Consensus 114 ~~~~V~L~V~r~~~ 127 (246)
++.|.|+|.|...
T Consensus 84 -~~~v~l~v~R~~~ 96 (100)
T 1whd_A 84 -PSEIILLVWRVSG 96 (100)
T ss_dssp -SSEEEEEEEECCS
T ss_pred -CCeEEEEEEECCC
Confidence 6679999998543
No 121
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=2.8e-13 Score=100.73 Aligned_cols=82 Identities=24% Similarity=0.409 Sum_probs=71.8
Q ss_pred EEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCc
Q psy18026 38 TVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGP 117 (246)
Q Consensus 38 ~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~ 117 (246)
++.+.+....+|||++.++.+ ...+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+.. +..
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~ 80 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRD--FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQS---ASP 80 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETT--TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSS
T ss_pred EEEEEecCCCCccEEEecccC--CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCc
Confidence 355555566889999999765 35689999999999999999 999999999999999999999999999987 577
Q ss_pred EEEEEEec
Q psy18026 118 IKLVVAKC 125 (246)
Q Consensus 118 V~L~V~r~ 125 (246)
+.|+|.|.
T Consensus 81 v~l~v~R~ 88 (94)
T 1vb7_A 81 LRLQLDRS 88 (94)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 99999984
No 122
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.43 E-value=1.1e-12 Score=96.66 Aligned_cols=82 Identities=22% Similarity=0.317 Sum_probs=71.5
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
.++|.+.. ..+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||..+.++++.++..+++.. +
T Consensus 4 ~~~v~~~~--~~~~G~~l~~~~~--~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g 75 (91)
T 2pkt_A 4 TQQIDLQG--PGPWGFRLVGGKD--FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC---T 75 (91)
T ss_dssp EEEEEEES--SSCCSEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---S
T ss_pred cEEEEECC--CCCCCEEEEccCC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---C
Confidence 35566653 4789999999765 25789999999999999999 999999999999999999999999999985 7
Q ss_pred CcEEEEEEec
Q psy18026 116 GPIKLVVAKC 125 (246)
Q Consensus 116 ~~V~L~V~r~ 125 (246)
..+.|+|.|.
T Consensus 76 ~~v~l~v~R~ 85 (91)
T 2pkt_A 76 DNLTLTVARS 85 (91)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEEC
Confidence 7899999984
No 123
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.42 E-value=2.4e-12 Score=95.45 Aligned_cols=80 Identities=26% Similarity=0.364 Sum_probs=70.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
...++|.|.++. .+|||.+.+ +.+++|..|.++++|+++| |++||+|++|||+.+.++++.+++..++ .
T Consensus 7 ~~~r~v~l~~~~-~~~G~~l~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~-- 75 (93)
T 2dls_A 7 GVQRCVIIQKDQ-HGFGFTVSG------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-S-- 75 (93)
T ss_dssp CCEEEEEEECSS-SSCCEEEEC------SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-S--
T ss_pred CCCEEEEEEeCC-CceeEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-C--
Confidence 455678888775 789999986 5789999999999999999 9999999999999999999999988887 3
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 76 -g~~v~l~v~R~ 86 (93)
T 2dls_A 76 -GAYVALTLLGS 86 (93)
T ss_dssp -SSEEEEEEECC
T ss_pred -CCEEEEEEEEC
Confidence 67799999984
No 124
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.42 E-value=4.3e-13 Score=101.30 Aligned_cols=84 Identities=18% Similarity=0.322 Sum_probs=73.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|.|. + ..+|||++.++.+ .+.+++|..|.++|+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 4 g~~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 76 (103)
T 1wf7_A 4 GSSGSVSLV-G-PAPWGFRLQGGKD--FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC-- 76 (103)
T ss_dssp CCCEEEEEE-S-SSCCSCCEEEETT--TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC--
T ss_pred CCEEEEEEe-C-CCccCEEEecccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 456788887 3 4789999999876 35679999999999999999 999999999999999999999999999887
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 77 -g~~v~l~v~R~ 87 (103)
T 1wf7_A 77 -TGSLNMTLQRA 87 (103)
T ss_dssp -SSEEEEEECCC
T ss_pred -CCeEEEEEEeC
Confidence 67799999873
No 125
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.41 E-value=2.8e-12 Score=96.38 Aligned_cols=87 Identities=20% Similarity=0.357 Sum_probs=71.0
Q ss_pred CCccceEEEEEEcCCC--CcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHH
Q psy18026 31 SMSLNIITVTLNMDTV--NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (246)
Q Consensus 31 ~~~~~i~~V~L~k~~~--~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lL 108 (246)
.|..+.+.|+|.|... .+|||++.+... .+..+++|..|.+||+|+++| |++||+|++|||..+.+++++++.+++
T Consensus 2 ~~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~-~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l 79 (94)
T 3kzd_A 2 AMGKVTHSIHIEKSDTAADTYGFSLSSVEE-DGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFL 79 (94)
T ss_dssp --CCEEEEEEEEC------CCSEEEEEECS-SSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CcccceeEEEEEeCCCCcCCcCEEEEecCC-CCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3667888899998763 479999998543 235689999999999999999 999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEe
Q psy18026 109 REVVQKPGPIKLVVAK 124 (246)
Q Consensus 109 r~~~~~~~~V~L~V~r 124 (246)
++ ..++|+|..
T Consensus 80 ~~-----~~l~ltV~~ 90 (94)
T 3kzd_A 80 SQ-----PSLGLLVRT 90 (94)
T ss_dssp HS-----SEEEEEEEE
T ss_pred hC-----CeEEEEEEe
Confidence 73 458888875
No 126
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.9e-13 Score=101.22 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=70.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
++.++|.+ ....+|||++.++.+ ...+++|..|.++|+|+++|.|++||+|++|||..+.++ +++++.+++..
T Consensus 10 ~~~~~v~~--~~~~~~G~~~~gg~~--~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~-- 82 (100)
T 2edp_A 10 FQYVPVQL--QGGAPWGFTLKGGLE--HCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGS-- 82 (100)
T ss_dssp CEEEEEEC--CSCSCCCCCEEEEGG--GTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTC--
T ss_pred cEEEEEEE--CCCCCcCEEEeccCC--CCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhC--
Confidence 45555554 444689999999765 256899999999999999944999999999999999997 89999999987
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 83 -~~~v~l~v~R~ 93 (100)
T 2edp_A 83 -FRILKLIVRRR 93 (100)
T ss_dssp -CSSCEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 67799999984
No 127
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.41 E-value=2.1e-12 Score=97.38 Aligned_cols=75 Identities=32% Similarity=0.560 Sum_probs=65.3
Q ss_pred CcccEEEEcccCC----------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 47 NFLGISIVGQSNK----------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 47 ~~LG~sI~gg~~~----------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
.+|||++.|+.+. ....|++|..|.++|+|+++| |++||+|++|||..+.++++++++.+|+.. .+.
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~g~ 95 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKR--SEE 95 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCT--TCS
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCC
Confidence 4699999977653 236789999999999999999 999999999999999999999999999875 145
Q ss_pred cEEEEEEe
Q psy18026 117 PIKLVVAK 124 (246)
Q Consensus 117 ~V~L~V~r 124 (246)
.+.|+|.|
T Consensus 96 ~v~l~v~R 103 (104)
T 3sfj_A 96 VVRLLVTR 103 (104)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 69999876
No 128
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.41 E-value=3.3e-12 Score=107.13 Aligned_cols=87 Identities=20% Similarity=0.293 Sum_probs=77.2
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeeccc--CCHHHHHHHHHhcc
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFEN--MSNDEAVRVLREVV 112 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~--~s~~eav~lLr~~~ 112 (246)
+.++|+|.++ ..+|||+|.++.+.....++||..|.+||+|+++|+|++||+|++|||..+.+ +++.+++.+++..
T Consensus 18 ~~~~v~~~~~-~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~- 95 (206)
T 3r0h_A 18 KKILIELKVE-KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT- 95 (206)
T ss_dssp SCEEEEEECT-TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC-
T ss_pred CEEEEEEEeC-CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc-
Confidence 5667888876 58999999998774333689999999999999999999999999999999999 9999999999988
Q ss_pred CCCCc-EEEEEEec
Q psy18026 113 QKPGP-IKLVVAKC 125 (246)
Q Consensus 113 ~~~~~-V~L~V~r~ 125 (246)
++. |.|+|.|.
T Consensus 96 --~~~~v~l~v~R~ 107 (206)
T 3r0h_A 96 --YEKAVTLTVFRA 107 (206)
T ss_dssp --CSSEEEEEEECC
T ss_pred --CCCceEEEEEec
Confidence 677 99999984
No 129
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=5.4e-13 Score=99.77 Aligned_cols=82 Identities=30% Similarity=0.413 Sum_probs=71.8
Q ss_pred cceEEEEEEcCCCC-cccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 34 LNIITVTLNMDTVN-FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 34 ~~i~~V~L~k~~~~-~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
...++|+|.++... +|||.+.+ ..+++|..|.++|+|+ .| |++||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~- 77 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREA- 77 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHC-
T ss_pred CccEEEEEEECCCCCcccEEEec------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34677899887644 79999987 6789999999999995 55 999999999999999999999999999987
Q ss_pred CCCCcEEEEEEecC
Q psy18026 113 QKPGPIKLVVAKCW 126 (246)
Q Consensus 113 ~~~~~V~L~V~r~~ 126 (246)
+..|.|+|.|..
T Consensus 78 --g~~v~l~v~R~~ 89 (96)
T 2edv_A 78 --EDSLSITVVRCT 89 (96)
T ss_dssp --SSCEEEEEEECC
T ss_pred --CCeEEEEEEECC
Confidence 778999999954
No 130
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.40 E-value=1.1e-12 Score=109.99 Aligned_cols=85 Identities=21% Similarity=0.416 Sum_probs=76.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++.+|.|.+....+|||++.++.+ ...++||..|.+||+|+++| |++||+|++|||..+.++++++++.+|+.
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~--- 156 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLE--FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT--- 156 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS---
T ss_pred CceEEEEEEeCCCCceeEEEEcccc--cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC---
Confidence 4678899999877899999999765 36799999999999999999 99999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 157 -~~~v~l~v~r~ 167 (192)
T 3k1r_A 157 -EKTVSIKVRHI 167 (192)
T ss_dssp -SSEEEEEEEEC
T ss_pred -CCeEEEEEEEC
Confidence 46799999984
No 131
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.09 E-value=3.2e-14 Score=109.91 Aligned_cols=88 Identities=31% Similarity=0.382 Sum_probs=75.6
Q ss_pred CCccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
.+...+.+|.|.++...+|||.+.++.+ ...+++|..|.+||+|++++.|++||+|++|||..+.++++++++.+|+.
T Consensus 23 ~~~~~~~~v~l~k~~~~glG~~l~~g~~--~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~ 100 (112)
T 2lob_A 23 LYFQGIRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ 100 (112)
Confidence 3445778899998888999999999765 25689999999999999943399999999999999999999999999998
Q ss_pred ccCCCCcEEEEEE
Q psy18026 111 VVQKPGPIKLVVA 123 (246)
Q Consensus 111 ~~~~~~~V~L~V~ 123 (246)
. ++.|+|+|.
T Consensus 101 ~---~~~v~l~V~ 110 (112)
T 2lob_A 101 Q---RGEIEFEVV 110 (112)
Confidence 7 666888775
No 132
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.38 E-value=4e-12 Score=97.54 Aligned_cols=84 Identities=27% Similarity=0.417 Sum_probs=73.7
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
....+|.+.++...+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~--~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-- 88 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPI--QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-- 88 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCS--SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC--
T ss_pred CCcEEEEEEEcCCCceeEEEeecCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--
Confidence 4457788887778899999998764 36799999999999999999 999999999999999999998999999864
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
..+.|+|.|
T Consensus 89 --~~v~l~v~r 97 (114)
T 1x5n_A 89 --RSLTISIVA 97 (114)
T ss_dssp --SSEEEEECS
T ss_pred --CeEEEEEEc
Confidence 479999976
No 133
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.37 E-value=2.7e-12 Score=101.34 Aligned_cols=84 Identities=19% Similarity=0.368 Sum_probs=73.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
..+++.|.++ +.+|||.+.+. +.+++|..|.+||||+++|+|++||+|++|||..+.+.++++++++|+... .
T Consensus 27 ~~~~~~l~k~-~~glG~~i~~~-----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~-~ 99 (126)
T 1wif_A 27 KVIQTKLTVG-NLGLGLVVIQN-----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT-I 99 (126)
T ss_dssp CEEEEEEECC-TTCCCCCEEEE-----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC-S
T ss_pred ceEEEEEecC-CceEeEEEEcC-----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-C
Confidence 5778888866 58899999873 678999999999999999999999999999999999999999999999742 1
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 100 G~~v~l~V~R~ 110 (126)
T 1wif_A 100 GTVLQIKAYRG 110 (126)
T ss_dssp SCEEEEEEESS
T ss_pred CCEEEEEEEEC
Confidence 45699999984
No 134
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.37 E-value=3.9e-12 Score=97.85 Aligned_cols=81 Identities=15% Similarity=0.260 Sum_probs=71.3
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
...+|.|.++ ..+|||.+.+ ..+++|..|.+||+|+++| |++||+|++|||..+.++++++++++++..
T Consensus 23 ~~r~v~l~k~-~~~~G~~l~~------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~--- 91 (109)
T 2vsv_A 23 MPRSIRFTAE-EGDLGFTLRG------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF--- 91 (109)
T ss_dssp SCEEEEECCG-GGCCCEEEES------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred CCEEEEEEeC-CCceeEEEeC------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 4567889886 4789999976 5678999999999999999 999999999999999999999999999987
Q ss_pred CCc-EEEEEEecC
Q psy18026 115 PGP-IKLVVAKCW 126 (246)
Q Consensus 115 ~~~-V~L~V~r~~ 126 (246)
++. |.|+|.+..
T Consensus 92 ~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 92 GEDEIEMKVVSLL 104 (109)
T ss_dssp TTSCEEEEEESCC
T ss_pred CCCeEEEEEEECC
Confidence 554 999998743
No 135
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.36 E-value=3.5e-12 Score=95.40 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=69.4
Q ss_pred EEEEEcCCCCcccEEEEcccCCCCC-----CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 38 TVTLNMDTVNFLGISIVGQSNKGGD-----GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 38 ~V~L~k~~~~~LG~sI~gg~~~~~~-----~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
+|.|.+. ..+|||++.++....++ .+++|..|.+||+|+++| |++||+|++|||..+.++++++++.+|+..
T Consensus 5 ~v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 81 (99)
T 3khf_A 5 PIVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS- 81 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS-
T ss_pred CEEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 4667665 58999999976432112 266899999999999999 999999999999999999999999999976
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 82 --g~~v~l~v~r~ 92 (99)
T 3khf_A 82 --GNKISLRTTAL 92 (99)
T ss_dssp --CSEEEEEEECS
T ss_pred --CCEEEEEEEEC
Confidence 67799999973
No 136
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.36 E-value=5.9e-12 Score=98.41 Aligned_cols=85 Identities=19% Similarity=0.284 Sum_probs=74.2
Q ss_pred CccceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
......+|.|.++. .+|||.+.++.+ ..+++|..|.++|+|+++| |++||+|++|||..+.+++++++..+|+..
T Consensus 6 ~~~~~r~v~l~~~~-~g~G~~l~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (128)
T 2kjd_A 6 TMLRPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (128)
T ss_dssp TTCCCEEEEEECCS-SSCCEEEEECSS---SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCCcEEEEEecCC-CcccEEEEecCC---CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 44567778888775 789999998754 5799999999999999999 999999999999999999999999999987
Q ss_pred cCCCCc-EEEEEEe
Q psy18026 112 VQKPGP-IKLVVAK 124 (246)
Q Consensus 112 ~~~~~~-V~L~V~r 124 (246)
.+. +.|+|.|
T Consensus 81 ---~~~~~~l~v~R 91 (128)
T 2kjd_A 81 ---GDETKLLVVDR 91 (128)
T ss_dssp ---CSEEEEEEECH
T ss_pred ---CCCEEEEEEEe
Confidence 454 7788887
No 137
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=9.8e-12 Score=93.00 Aligned_cols=84 Identities=23% Similarity=0.379 Sum_probs=69.6
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+.++|.|.+.. .+|||.|.+. ..+++|..|.++ |+.+| |++||+|++|||.++.+++|++++++|+....
T Consensus 9 ~~~~~v~l~~~~-~g~G~~i~~~-----~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 79 (96)
T 1ujv_A 9 AELMTLTIVKGA-QGFGFTIADS-----PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPI 79 (96)
T ss_dssp CCCEEEEEECCS-SSSSEEEEEE-----TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCT
T ss_pred ceEEEEEEEeCC-CceeEEEEcC-----CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 567889998864 8999999753 457999999994 56666 99999999999999999999999999998610
Q ss_pred CCCcEEEEEEecCC
Q psy18026 114 KPGPIKLVVAKCWD 127 (246)
Q Consensus 114 ~~~~V~L~V~r~~~ 127 (246)
+..|.|+|.|...
T Consensus 80 -g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 80 -GSETSLIIHRGSG 92 (96)
T ss_dssp -TSEEEEEEECCSS
T ss_pred -CCEEEEEEEECCC
Confidence 3569999998543
No 138
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.36 E-value=4.1e-12 Score=125.98 Aligned_cols=92 Identities=32% Similarity=0.520 Sum_probs=81.7
Q ss_pred CCccceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHH
Q psy18026 31 SMSLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (246)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~l 107 (246)
...++.++|.|.++. .+|||+|.||.+. ..+.++||..|.+||+|+++|+|++||+|++|||+++.+++|.+++.+
T Consensus 55 ~~~~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 133 (721)
T 2xkx_A 55 EGEMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEA 133 (721)
T ss_pred CCCceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344688999999886 6999999998764 237899999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEecC
Q psy18026 108 LREVVQKPGPIKLVVAKCW 126 (246)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~~ 126 (246)
|+.+ +..|.|+|.|..
T Consensus 134 l~~~---g~~v~l~v~R~~ 149 (721)
T 2xkx_A 134 LKEA---GSIVRLYVMRRK 149 (721)
T ss_pred hhcc---ccccceEEEecc
Confidence 9987 677999998743
No 139
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.36 E-value=6.7e-12 Score=105.11 Aligned_cols=87 Identities=28% Similarity=0.403 Sum_probs=77.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
..++|.|.++.+.+|||++.++.+ ...++||..|.+||+|+++|.|++||+|++|||..+.+++|.+++.+++..
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 81 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGID--KDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV--- 81 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTT--SSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC---
T ss_pred CCEEEEEEeCCCCCCCEEEecccC--CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 567889988888999999999866 257899999999999999944999999999999999999999999999887
Q ss_pred CCcEEEEEEecC
Q psy18026 115 PGPIKLVVAKCW 126 (246)
Q Consensus 115 ~~~V~L~V~r~~ 126 (246)
+..|.|+|.|..
T Consensus 82 g~~v~l~v~R~~ 93 (200)
T 2qt5_A 82 GERVVLEVEYEL 93 (200)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEeccC
Confidence 677999998853
No 140
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.35 E-value=2.1e-12 Score=101.11 Aligned_cols=87 Identities=29% Similarity=0.465 Sum_probs=76.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.++++|.|.++.+.+|||.+.+..+ ..+++|..|.+||+|+++|.|++||+|++|||..+.+++++++.++|+..
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~---~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 81 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI-- 81 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTT---SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC--
T ss_pred CceEEEEEEeCCCCcEeEEEEecCC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 4678899998877899999998643 57999999999999999995599999999999999999999999999875
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
.+..+.|+|.|.
T Consensus 82 ~g~~v~l~v~R~ 93 (127)
T 1b8q_A 82 ASETHVVLILRG 93 (127)
T ss_dssp CSSCEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 145699999973
No 141
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.35 E-value=6.8e-12 Score=104.95 Aligned_cols=93 Identities=20% Similarity=0.232 Sum_probs=80.0
Q ss_pred ccceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 33 SLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
..+.++|.|.++...+|||.+.++.+. ....+++|..|.+||+|+++|+|++||+|++|||..+.+++++++.++|+.
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 357889999999889999999998653 136789999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEecC
Q psy18026 111 VVQKPGPIKLVVAKCW 126 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~~ 126 (246)
... +..|.|+|.|..
T Consensus 84 ~~~-g~~v~l~v~R~~ 98 (196)
T 1p1d_A 84 SSI-TSKVTLEIEFDV 98 (196)
T ss_dssp CCS-SSEEEEEEEECS
T ss_pred CCC-CCeEEEEEEecC
Confidence 721 245999998843
No 142
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.34 E-value=5.1e-12 Score=105.94 Aligned_cols=83 Identities=18% Similarity=0.340 Sum_probs=73.9
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
..+++.+.+....+|||.+.+. ..++||..|.+||+|+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 113 ~~~~v~l~~~~~~~lG~~~~~~-----~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--- 184 (206)
T 3r0h_A 113 EKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA--- 184 (206)
T ss_dssp EEEEEEEECCTTCCCCEEEEEC-----SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC---
T ss_pred cEEEEEEecCCCCccCeEEEcC-----CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 4566777776667899999863 67899999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
++.+.|+|.|.
T Consensus 185 ~~~v~L~V~R~ 195 (206)
T 3r0h_A 185 NGKVSMEVTRP 195 (206)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 77899999983
No 143
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.33 E-value=6.4e-12 Score=104.61 Aligned_cols=74 Identities=30% Similarity=0.530 Sum_probs=66.9
Q ss_pred CcccEEEEcccCC------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEE
Q psy18026 47 NFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKL 120 (246)
Q Consensus 47 ~~LG~sI~gg~~~------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L 120 (246)
.+|||+|.|+.+. ..+.|+||..|.+||+|++ | |++||+|++|||..+.+++|.+++.+++.. ++.|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l 76 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF---QNTVEL 76 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEE
Confidence 6799999998642 2468999999999999999 7 999999999999999999999999999998 678999
Q ss_pred EEEec
Q psy18026 121 VVAKC 125 (246)
Q Consensus 121 ~V~r~ 125 (246)
+|.|.
T Consensus 77 ~v~r~ 81 (195)
T 2qbw_A 77 IIVRE 81 (195)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99983
No 144
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=4.6e-12 Score=95.16 Aligned_cols=83 Identities=33% Similarity=0.466 Sum_probs=70.6
Q ss_pred ceEEEEEEcC-CCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 35 NIITVTLNMD-TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 35 ~i~~V~L~k~-~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
+..+|.|.+. .+.+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||..+.++++.+++..++.
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--- 81 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSE--HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG--- 81 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTT--TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS---
T ss_pred ccEEEEEEECCCCCcccEEEeCCCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC---
Confidence 5667777763 46889999998765 36789999999999999999 99999999999999999999888877754
Q ss_pred CCCcEEEEEEe
Q psy18026 114 KPGPIKLVVAK 124 (246)
Q Consensus 114 ~~~~V~L~V~r 124 (246)
...|.|+|.|
T Consensus 82 -~~~v~l~v~R 91 (101)
T 1uez_A 82 -SKKLVLSVYS 91 (101)
T ss_dssp -SSSCCEEECC
T ss_pred -CCeEEEEEEE
Confidence 3468999987
No 145
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.33 E-value=1e-11 Score=102.63 Aligned_cols=87 Identities=37% Similarity=0.586 Sum_probs=74.8
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCC---CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
..+++.+.+.. .+|||.+.++.+. ....++||..|.+||+|+++|+|++||+|++|||..+.++++++++++|+..
T Consensus 100 ~~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 100 KVMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred ccEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 45567777665 5899999986553 2346899999999999999999999999999999999999999999999977
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 179 ---~~~v~l~v~R~ 189 (196)
T 3gsl_A 179 ---YDVVYLKVAKP 189 (196)
T ss_dssp ---CEEEEEEEEEE
T ss_pred ---CCeEEEEEeCC
Confidence 67799999983
No 146
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.5e-11 Score=95.24 Aligned_cols=85 Identities=19% Similarity=0.334 Sum_probs=72.5
Q ss_pred cceEEEEEEcCCCC--cccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 34 LNIITVTLNMDTVN--FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 34 ~~i~~V~L~k~~~~--~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
.+.++|+|.+.... +|||+|.+..+. +..+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~-~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED-GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET-TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC-CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 46788999988753 799999985431 12689999999999999999 99999999999999999999999999973
Q ss_pred cCCCCcEEEEEEec
Q psy18026 112 VQKPGPIKLVVAKC 125 (246)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (246)
..+.|+|.|.
T Consensus 91 ----~~v~l~v~R~ 100 (114)
T 2d8i_A 91 ----PSLGLLVRTY 100 (114)
T ss_dssp ----SEEEEEEEEC
T ss_pred ----CcEEEEEEEC
Confidence 3699999984
No 147
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.31 E-value=1.4e-11 Score=98.43 Aligned_cols=93 Identities=27% Similarity=0.422 Sum_probs=74.3
Q ss_pred CCCccceEEEEEEcCC---CCcccEEEEcccCC----------CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeec
Q psy18026 30 SSMSLNIITVTLNMDT---VNFLGISIVGQSNK----------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINF 96 (246)
Q Consensus 30 ~~~~~~i~~V~L~k~~---~~~LG~sI~gg~~~----------~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~ 96 (246)
..++..+.+|+|.+.. ..+|||.+.++.+. ....|++|..|.+||||+++| |++||.|++|||..+
T Consensus 18 ~~~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 96 (139)
T 2vz5_A 18 LYFQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDM 96 (139)
T ss_dssp ----CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred ccCCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEc
Confidence 3344567788887643 23799999986542 125799999999999999999 999999999999999
Q ss_pred ccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 97 ENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 97 ~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.++++++++++|+.. .+..|.|+|.|.
T Consensus 97 ~~~~~~~~~~~l~~~--~g~~v~l~v~R~ 123 (139)
T 2vz5_A 97 TMVTHDQARKRLTKR--SEEVVRLLVTRQ 123 (139)
T ss_dssp TTCCHHHHHHHHCCT--TCSEEEEEEEEC
T ss_pred CCCCHHHHHHHHHhC--CCCEEEEEEEEC
Confidence 999999999999874 145699999984
No 148
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=2e-11 Score=94.05 Aligned_cols=81 Identities=28% Similarity=0.460 Sum_probs=71.0
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.+.|.|.+.. .+|||.+.++. +.+++|..|.++++|+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 19 ~~~~v~l~~~~-~~lG~~~~~~~----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~--- 89 (117)
T 1uit_A 19 EPRHVKVQKGS-EPLGISIVSGE----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ--- 89 (117)
T ss_dssp CCEEEEEECSS-CCCCEEEEECT----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC---
T ss_pred CCEEEEEEeCC-CCccEEEEccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 45678888765 78999999863 5699999999999999999 999999999999999999999988777665
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
+..|.|+|.|
T Consensus 90 g~~v~l~v~r 99 (117)
T 1uit_A 90 CDTITILAQY 99 (117)
T ss_dssp CSEEEEEECC
T ss_pred CCeEEEEEEE
Confidence 6679999987
No 149
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=2.5e-12 Score=100.79 Aligned_cols=86 Identities=20% Similarity=0.269 Sum_probs=72.0
Q ss_pred ceEEEEEEcCCCCcccEEEEcccC-----------------------C---CCCCCeEEEEecCCChhhhcCCCCCCCEE
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSN-----------------------K---GGDGGIYVGSIMKGGAVALDGRIEPGDMI 88 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~-----------------------~---~~~~gi~I~~V~~gg~A~~~GrL~~GD~I 88 (246)
...+|.|.+.. .+|||+|.+... . ..+.+++|..|.++++|+++| |++||+|
T Consensus 8 ~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 34478888775 789999986210 0 123679999999999999999 9999999
Q ss_pred EEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 89 LQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 89 l~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
++|||+.+.++++++++++|+.. +..|.|+|.|.
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~ 119 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNS---DTTLELSVMPK 119 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTC---TTEEEEECCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEEC
Confidence 99999999999999999999986 67799999873
No 150
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=4.2e-11 Score=88.75 Aligned_cols=69 Identities=25% Similarity=0.440 Sum_probs=61.1
Q ss_pred cCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEE
Q psy18026 43 MDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVV 122 (246)
Q Consensus 43 k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V 122 (246)
.+...+|||.+.+ | +|..|.+||+|+++| |++||+|++|||..+.++++++++++|+.. +..|.|+|
T Consensus 20 ~~~~~~lG~~~~~--------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---g~~v~l~v 86 (90)
T 1y7n_A 20 PDLRYQLGFSVQN--------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA---VGEIHMKT 86 (90)
T ss_dssp SSTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC---CEEEEEEE
T ss_pred CCCccccCeEecC--------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEE
Confidence 4446789999854 1 999999999999999 999999999999999999999999999976 67799998
Q ss_pred Ee
Q psy18026 123 AK 124 (246)
Q Consensus 123 ~r 124 (246)
.+
T Consensus 87 ~p 88 (90)
T 1y7n_A 87 MP 88 (90)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 151
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=5.4e-11 Score=93.18 Aligned_cols=84 Identities=32% Similarity=0.464 Sum_probs=71.4
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+.+++.+.......|||.+.++.+ ...+++|..|.+||+|+++| |++||+|++|||..+.++++.++++.++..
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 93 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAE--YGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS--- 93 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTT--TTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC---
T ss_pred cEEEEEEEECCCCccCEEEECccc--CCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC---
Confidence 456677776555789999998654 35689999999999999999 999999999999999999999999998763
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
..+.|+|.|.
T Consensus 94 -~~v~l~v~R~ 103 (128)
T 1uf1_A 94 -RHLILTVKDV 103 (128)
T ss_dssp -SEEEEEEECC
T ss_pred -CeEEEEEEEC
Confidence 5799999873
No 152
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.26 E-value=2.2e-11 Score=115.29 Aligned_cols=81 Identities=28% Similarity=0.571 Sum_probs=71.6
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
+..|.|.+. .+|||.+.|+. +.|+||..|.+||+|+++| |++||+|++|||+.+.++++++++.+|+.... +
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~-g 73 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK-G 73 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEET----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT-T
T ss_pred ceEEEEecC--CccceEEEccC----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC-C
Confidence 467888774 78999999974 5789999999999999999 99999999999999999999999999998311 5
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
+.|+|+|.+
T Consensus 74 ~~v~L~V~r 82 (468)
T 3shw_A 74 EEVTILAQK 82 (468)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 679999988
No 153
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.25 E-value=3.1e-11 Score=94.57 Aligned_cols=73 Identities=32% Similarity=0.609 Sum_probs=64.4
Q ss_pred CCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 46 VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 46 ~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
+.+|||.+.++. +.+++|..|.++|||+++| |++||+|++|||..+.++++++++.+|+... .+..+.|+|.|
T Consensus 38 ~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~g~~v~l~v~R 110 (124)
T 3tsv_A 38 GDSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP-KGEEVTILAQK 110 (124)
T ss_dssp SSCCCEEEEECT----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSC-TTCEEEEEEEE
T ss_pred CCceeEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC-CCCEEEEEEEE
Confidence 478999999853 5789999999999999999 9999999999999999999999999888631 15569999987
No 154
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.25 E-value=6.9e-11 Score=86.62 Aligned_cols=83 Identities=18% Similarity=0.324 Sum_probs=68.2
Q ss_pred ceEEEEEEcCCCC--cccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 35 NIITVTLNMDTVN--FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 35 ~i~~V~L~k~~~~--~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
.-+.+.+.+.++. .|||.+... ..+++|..|.+||+|+++| |++||.|++|||..+.+.+++++.++|+...
T Consensus 3 ~~~~~~~~~~~~~~~~lG~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2eaq_A 3 SDMRISINQTPGKSLDFGFTIKWD-----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQ 76 (90)
T ss_dssp EEEEEEEECCTTCSSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCCcccEEEEec-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcC
Confidence 3456677766543 799999753 6789999999999999999 9999999999999998888999999998531
Q ss_pred CCCCcEEEEEEe
Q psy18026 113 QKPGPIKLVVAK 124 (246)
Q Consensus 113 ~~~~~V~L~V~r 124 (246)
. +..|.|+|.|
T Consensus 77 ~-g~~v~l~v~R 87 (90)
T 2eaq_A 77 E-TGHLVMDVRR 87 (90)
T ss_dssp H-HTEEEEEEEE
T ss_pred C-CCEEEEEEEe
Confidence 0 4569999987
No 155
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=2.7e-12 Score=96.94 Aligned_cols=81 Identities=20% Similarity=0.306 Sum_probs=70.0
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
++|.+. ...+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+.. +.
T Consensus 7 ~~v~~~--~~~~lG~~l~~g~~--~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~ 78 (103)
T 1v5l_A 7 GNVVLP--GPAPWGFRLSGGID--FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA---SY 78 (103)
T ss_dssp BCCEEE--SSSCCSBCCEEETT--TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC---CS
T ss_pred EEEEEc--CCCCcCEEEecccc--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CC
Confidence 445554 34689999998765 24589999999999999999 999999999999999999999999999987 67
Q ss_pred cEEEEEEec
Q psy18026 117 PIKLVVAKC 125 (246)
Q Consensus 117 ~V~L~V~r~ 125 (246)
.+.|+|.|.
T Consensus 79 ~v~l~v~R~ 87 (103)
T 1v5l_A 79 QLCLKIDRA 87 (103)
T ss_dssp EEECEECCC
T ss_pred eEEEEEEEC
Confidence 799999873
No 156
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=8e-11 Score=91.85 Aligned_cols=90 Identities=31% Similarity=0.471 Sum_probs=72.4
Q ss_pred CccceEEEEEEcCC-CCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHh
Q psy18026 32 MSLNIITVTLNMDT-VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (246)
Q Consensus 32 ~~~~i~~V~L~k~~-~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~ 110 (246)
...+...+.+.+.. +.+|||.+....+.....+++|..|.++|+|+++|+|++||+|++|||..+.+ ++++.++|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~ 93 (124)
T 1wh1_A 16 EELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTS 93 (124)
T ss_dssp SSCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTC
T ss_pred CcceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 33566667776554 46799999986432224799999999999999999999999999999999984 8899999987
Q ss_pred ccCCCCcEEEEEEec
Q psy18026 111 VVQKPGPIKLVVAKC 125 (246)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (246)
. .+..|.|+|.|.
T Consensus 94 ~--~g~~v~l~v~R~ 106 (124)
T 1wh1_A 94 E--ENKNFSLLIARP 106 (124)
T ss_dssp S--SCCSCCEEEEEC
T ss_pred C--CCCEEEEEEEEC
Confidence 5 145699999984
No 157
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=99.32 Aligned_cols=83 Identities=19% Similarity=0.305 Sum_probs=73.4
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+...|.|.++. .+|||.+.++.+ ..+++|..|.+||+|+++| |++||+|++|||+.+.++++++++.+|+..
T Consensus 8 ~~~r~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-- 80 (216)
T 2krg_A 8 LRPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-- 80 (216)
T ss_dssp CCCEEEEEECCS-SSSCEEECCCSS---SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH--
T ss_pred cceEEEEEEeCC-CCceEEEEecCC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc--
Confidence 567788888775 789999998654 5699999999999999999 999999999999999999999999999987
Q ss_pred CCCcE-EEEEEe
Q psy18026 114 KPGPI-KLVVAK 124 (246)
Q Consensus 114 ~~~~V-~L~V~r 124 (246)
+..| .|+|.|
T Consensus 81 -g~~v~~l~V~R 91 (216)
T 2krg_A 81 -GDETKLLVVDR 91 (216)
T ss_dssp -CSEEEEEECCH
T ss_pred -CCeEEEEEEEE
Confidence 5678 888866
No 158
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.20 E-value=1.4e-10 Score=82.75 Aligned_cols=74 Identities=28% Similarity=0.466 Sum_probs=64.6
Q ss_pred EEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEE
Q psy18026 40 TLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIK 119 (246)
Q Consensus 40 ~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~ 119 (246)
.+.......|||.+. .+++|..|.++|+|+++|+|++||+|++|||..+.+++++++.++|+.. .+.+.
T Consensus 6 ~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~ 74 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS---KGKLK 74 (81)
T ss_dssp EECCSTTCCCCEEEE--------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS---TTEEE
T ss_pred EEECCCCCCCCEEEe--------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC---CCeEE
Confidence 444555678998875 3589999999999999999999999999999999999999999999986 56889
Q ss_pred EEEEe
Q psy18026 120 LVVAK 124 (246)
Q Consensus 120 L~V~r 124 (246)
|+|.|
T Consensus 75 l~v~R 79 (81)
T 2rcz_A 75 MVVQR 79 (81)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99876
No 159
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.20 E-value=1.7e-10 Score=84.64 Aligned_cols=78 Identities=31% Similarity=0.460 Sum_probs=66.8
Q ss_pred eEEEEEEcC-CCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 36 IITVTLNMD-TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 36 i~~V~L~k~-~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
.++|.+... ....|||.+. .+++|..|.+||+|+++|+|++||.|++|||..+.+++++++.++|+..
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 71 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--- 71 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred cEEEEEEeCCCCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 455666543 3467998875 4689999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
.+.+.|+|.|
T Consensus 72 ~~~v~l~v~r 81 (92)
T 3cyy_A 72 KGKLKMVVQR 81 (92)
T ss_dssp TTEEEEEEEC
T ss_pred CCcEEEEEEe
Confidence 5689999987
No 160
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31
Probab=99.19 E-value=3.7e-12 Score=97.55 Aligned_cols=59 Identities=56% Similarity=0.910 Sum_probs=44.6
Q ss_pred cccccchhhhcccCccccCChHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEe
Q psy18026 181 SSIAETEKAFEELSLTINTDMATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFI 241 (246)
Q Consensus 181 s~~~~~~~~~~~~~l~v~~~~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~ 241 (246)
|++|+.|| +++.+|++.+++..|++.|+.|++||.+|||+|++.++|++|+|+ |++.++
T Consensus 2 ~~~~~~~~-~~~~~l~~~~~l~~iv~~M~~p~~Gv~i~dr~~~~~~~~~~F~G~-dlVdWL 60 (105)
T 1fsh_A 2 SSVPGAPQ-LEEAPLTVKSDMSAIVRVMQLPDSGLEIRDRMWLKITIANAVIGA-DVVDWL 60 (105)
T ss_dssp -----------CCSCCSSSCHHHHHHHHHSTTSSSCSSCEEETTEEESSCCHHH-HHHHHH
T ss_pred CcCChhhh-ccccCCCccCCHHHHHHHHhCCCCCceeEEeEeCCEECCceeEcH-HHHHHH
Confidence 67899998 667899999999999999999999999999999999999999995 455444
No 161
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.18 E-value=1.9e-10 Score=93.76 Aligned_cols=82 Identities=28% Similarity=0.445 Sum_probs=72.5
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+..+|.|.+....+|||.+... +.+++|..|.+||||+++| |++||+|++|||..+.+++++.+..+++..
T Consensus 3 ~~~r~v~l~k~~~~~lG~~~~~~-----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 74 (166)
T 1w9e_A 3 MDPREVILCKDQDGKIGLRLKSI-----DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQA-- 74 (166)
T ss_dssp CCCEEEEEECCTTSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred CCCEEEEEEeCCCCcEeEEEEeC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--
Confidence 35678999988778999999984 6889999999999999999 999999999999999999988888899876
Q ss_pred CCC-cEEEEEEe
Q psy18026 114 KPG-PIKLVVAK 124 (246)
Q Consensus 114 ~~~-~V~L~V~r 124 (246)
.+ .+.|+|.+
T Consensus 75 -~~~~v~l~vr~ 85 (166)
T 1w9e_A 75 -FGEKITMTIRD 85 (166)
T ss_dssp -CSSEEEEEEEC
T ss_pred -CCCEEEEEEEc
Confidence 44 69999954
No 162
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=2.4e-11 Score=93.57 Aligned_cols=79 Identities=16% Similarity=0.343 Sum_probs=69.0
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
..+|.|.++ ..+|||.+.+ ..+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+.. .
T Consensus 16 ~r~v~l~~~-~~~~G~~l~~------~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~---~ 84 (111)
T 1vae_A 16 PRGIHFTVE-EGDLGFTLRG------NTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSF---G 84 (111)
T ss_dssp CCCCCEECC-SSCCSCCEES------SSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHT---T
T ss_pred CeEEEEEcC-CCcccEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---C
Confidence 345778775 5889999976 5678999999999999999 999999999999999999999999999987 5
Q ss_pred C-cEEEEEEec
Q psy18026 116 G-PIKLVVAKC 125 (246)
Q Consensus 116 ~-~V~L~V~r~ 125 (246)
+ .+.|+|.+.
T Consensus 85 ~~~v~l~V~~~ 95 (111)
T 1vae_A 85 GEEVEMKVVSL 95 (111)
T ss_dssp TSEECEEEECE
T ss_pred CceEEEEEEec
Confidence 5 499999873
No 163
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.17 E-value=1.2e-10 Score=107.86 Aligned_cols=82 Identities=29% Similarity=0.574 Sum_probs=71.1
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+...|.+.++ .+|||++.++. +.|+||..|.+||||+++| |++||+|++|||.++.++++++++.+|+... .
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~-~ 80 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP-K 80 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEET----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC-T
T ss_pred CcEEEEeecC--CceeEEEEecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc-C
Confidence 5666777765 46999999874 6899999999999999999 9999999999999999999999999999621 1
Q ss_pred CCcEEEEEEe
Q psy18026 115 PGPIKLVVAK 124 (246)
Q Consensus 115 ~~~V~L~V~r 124 (246)
+..|+|+|.+
T Consensus 81 g~~v~l~v~r 90 (391)
T 3tsz_A 81 GEEVTILAQK 90 (391)
T ss_dssp TSEEEEEEEE
T ss_pred CCeEEEEEee
Confidence 5569999987
No 164
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.16 E-value=1.8e-10 Score=87.43 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=68.2
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
..+.|... ..++||.+... ..+.+|..|.+|+||+++| |++||+|++|||..+...++++++..++.+.+.++
T Consensus 19 ~~l~l~~~-~~g~G~~l~~~-----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~ 91 (101)
T 3qik_A 19 KRLLILPQ-EEDYGFDIEEK-----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRR 91 (101)
T ss_dssp EEEEECCC-SSSSSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeC-CCcccEEEEcc-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCC
Confidence 34555543 58899999873 6678999999999999999 99999999999999988899999999988432377
Q ss_pred cEEEEEEe
Q psy18026 117 PIKLVVAK 124 (246)
Q Consensus 117 ~V~L~V~r 124 (246)
.|.|.|+.
T Consensus 92 ~v~LLV~~ 99 (101)
T 3qik_A 92 PLRLLVAT 99 (101)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEec
Confidence 89999984
No 165
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.16 E-value=2e-11 Score=112.91 Aligned_cols=91 Identities=19% Similarity=0.352 Sum_probs=76.3
Q ss_pred cceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.+...|.|.+..+++|||.|.+........+++|..|.+||+|+++|+|++||+|++|||.++.++++++++.+|+....
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred ccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 35678999988789999999985332234579999999999999999999999999999999999999999999988632
Q ss_pred CCCcEEEEEEec
Q psy18026 114 KPGPIKLVVAKC 125 (246)
Q Consensus 114 ~~~~V~L~V~r~ 125 (246)
+..|.|+|.|.
T Consensus 283 -~~~v~l~v~r~ 293 (388)
T 3suz_A 283 -QTQVKLNIVSC 293 (388)
T ss_dssp -CSCEEEEEEEC
T ss_pred -CCccccccccc
Confidence 34599999984
No 166
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.14 E-value=3.9e-10 Score=94.30 Aligned_cols=87 Identities=24% Similarity=0.439 Sum_probs=73.7
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCC--CCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
..++|.+.+. ..+|||.+.++... ....+++|..|.++|+|+++|+|++||+|++|||..+.++++++++++|+..
T Consensus 106 ~~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 183 (200)
T 2qt5_A 106 RTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC- 183 (200)
T ss_dssp EEEEEEEECB-TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred eEEEEEEecC-CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4556666654 47899999987542 1246899999999999999999999999999999999999999999999985
Q ss_pred CCCCcEEEEEEec
Q psy18026 113 QKPGPIKLVVAKC 125 (246)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (246)
+..+.|+|.|.
T Consensus 184 --~~~v~l~v~R~ 194 (200)
T 2qt5_A 184 --GQEATLLIEYD 194 (200)
T ss_dssp --CSEEEEEEEEE
T ss_pred --CCeEEEEEEEC
Confidence 67899999883
No 167
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.13 E-value=5.8e-10 Score=86.67 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=70.3
Q ss_pred CCCCCccceEEEEEE---cCCCCcccEEEEcccC-CCCCCCeEEEEecC--CChhhhcCCCCCCCEEEEECCeecccCCH
Q psy18026 28 TDSSMSLNIITVTLN---MDTVNFLGISIVGQSN-KGGDGGIYVGSIMK--GGAVALDGRIEPGDMILQVNDINFENMSN 101 (246)
Q Consensus 28 ~~~~~~~~i~~V~L~---k~~~~~LG~sI~gg~~-~~~~~gi~I~~V~~--gg~A~~~GrL~~GD~Il~VNg~~~~~~s~ 101 (246)
+++.|..-.++|+|. +...+.+||.+....+ .....+++|..|.+ +++|+++| |++||+|++|||..+.++++
T Consensus 5 ~~~~~~~~~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~ 83 (118)
T 2yub_A 5 SSGVQDQLPYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRV 83 (118)
T ss_dssp SSCCSCCSCCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCH
T ss_pred CCCchhcCCceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 334444433445554 3433456776663321 12357899999999 99999999 99999999999999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEEEec
Q psy18026 102 DEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 102 ~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
+++.++|+.. +..+.|+|.|.
T Consensus 84 ~dl~~~l~~~---g~~v~l~v~R~ 104 (118)
T 2yub_A 84 EEVEDAIKQT---SQTLQLLIEHD 104 (118)
T ss_dssp HHHHHHHHCC---SSCEEEEEEEC
T ss_pred HHHHHHHHhC---CCEEEEEEEEC
Confidence 9999999876 56799999884
No 168
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.13 E-value=2.1e-10 Score=113.75 Aligned_cols=84 Identities=26% Similarity=0.514 Sum_probs=75.6
Q ss_pred ceEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC
Q psy18026 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (246)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~ 114 (246)
+...|.|.+.. .+|||.+.++.+ ..|+||..|.+||+|+++|+|++||+|++|||+++.++++++++++|+..
T Consensus 307 ~~~~v~l~~~~-~~lG~~i~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~--- 379 (721)
T 2xkx_A 307 EPRRIVIHRGS-TGLGFNIVGGED---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA--- 379 (721)
T ss_pred ceEEEEEEECC-CCccEEEeccCC---CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc---
Confidence 56778888764 789999998754 67999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy18026 115 PGPIKLVVAKC 125 (246)
Q Consensus 115 ~~~V~L~V~r~ 125 (246)
++.|.|+|.+.
T Consensus 380 ~~~v~L~v~r~ 390 (721)
T 2xkx_A 380 GQTVTIIAQYK 390 (721)
T ss_pred CCeEEEEEEeC
Confidence 77899999874
No 169
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.11 E-value=5.2e-10 Score=93.42 Aligned_cols=86 Identities=27% Similarity=0.430 Sum_probs=73.5
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCC
Q psy18026 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (246)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~ 116 (246)
+++.|.++....|||.+.+........+++|..|.+||+|+++|+|++||.|++|||..+.+++++++.++|+.. +.
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~ 185 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC---ED 185 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC---TT
T ss_pred EEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CC
Confidence 566776555577999998854322257899999999999999999999999999999999999999999999987 67
Q ss_pred cEEEEEEec
Q psy18026 117 PIKLVVAKC 125 (246)
Q Consensus 117 ~V~L~V~r~ 125 (246)
.+.|+|.|.
T Consensus 186 ~v~l~v~R~ 194 (196)
T 1p1d_A 186 LVKLKIRKD 194 (196)
T ss_dssp CEEEEEECC
T ss_pred EEEEEEEeC
Confidence 899999874
No 170
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.51 E-value=9.9e-07 Score=71.47 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=62.4
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
.+++.|.++....|||.+.. + +|..|.++|+|+++| |++||.|++|||..+.++.++++.-.++.. +
T Consensus 89 ~~~v~l~~~~~~~lG~~~~~--------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~---g 155 (166)
T 1w9e_A 89 ERTITMHKDSTGHVGFIFKN--------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS---G 155 (166)
T ss_dssp CEEEEEECCTTSCCSEEEET--------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---C
T ss_pred cEEEEEecCCCCcEeEEEeC--------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhC---C
Confidence 35666665555678998872 2 899999999999999 999999999999999999999988888776 5
Q ss_pred CcEEEEEEe
Q psy18026 116 GPIKLVVAK 124 (246)
Q Consensus 116 ~~V~L~V~r 124 (246)
..+.|.|..
T Consensus 156 ~~~~l~v~~ 164 (166)
T 1w9e_A 156 TVVTITIMP 164 (166)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 667777753
No 171
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.50 E-value=4.4e-07 Score=83.52 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=63.2
Q ss_pred CCcccEEEEcc-cCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 46 VNFLGISIVGQ-SNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 46 ~~~LG~sI~gg-~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..++|+.+... .+ +.+++|..|.+||||+++| |++||+|++|||..+.+++.++++.+|+.. .+..|+|+|.|
T Consensus 84 ~~giG~~~~~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~r 157 (388)
T 1fc6_A 84 VTGVGLEITYDGGS---GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE--ADSQVEVVLHA 157 (388)
T ss_dssp CBBCSEEEEECTTC---SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBS--TTCEEEEEEEE
T ss_pred eEEEEEEEEEeecC---CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CCCEEEEEEEe
Confidence 45789998753 22 5789999999999999999 999999999999999999999999999865 14459999988
Q ss_pred c
Q psy18026 125 C 125 (246)
Q Consensus 125 ~ 125 (246)
.
T Consensus 158 ~ 158 (388)
T 1fc6_A 158 P 158 (388)
T ss_dssp T
T ss_pred C
Confidence 4
No 172
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.49 E-value=1.5e-08 Score=93.66 Aligned_cols=66 Identities=23% Similarity=0.406 Sum_probs=0.0
Q ss_pred CCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 46 VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 46 ~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..+|||.+.++ +|..|.+||+|+++| |++||+|++|||.++.++++++++++|+.. ++.+.|+|.+
T Consensus 307 ~~~lG~~i~~g---------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~---~~~v~L~V~p 372 (388)
T 3suz_A 307 KYQLGFSVQNG---------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNS---VGEIHMKTMP 372 (388)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCccceEEecC---------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEe
Confidence 35688887652 899999999999999 999999999999999999999999999987 7789998864
No 173
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.38 E-value=1.6e-06 Score=64.74 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=49.3
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..|++|..|.+++||+. | |++||.|++|||..+.+ .++...+|.... .+..+.|+|.|
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~-~g~~v~l~v~R 63 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKK-VGDTVKINYKH 63 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSC-TTCEEEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCC-CCCEEEEEEEE
Confidence 67899999999999995 7 99999999999999986 578888887642 14569999988
No 174
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.38 E-value=1.7e-06 Score=65.66 Aligned_cols=56 Identities=18% Similarity=0.497 Sum_probs=50.0
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..|++|..|.++|+|+++| |++||.|++|||..+.+ .++...+|+. +..+.|+|.|
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R 89 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRR 89 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH----CSSEEEEEEE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEE
Confidence 5789999999999999999 99999999999999985 6788888875 4569999988
No 175
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.37 E-value=7.5e-07 Score=65.92 Aligned_cols=59 Identities=20% Similarity=0.335 Sum_probs=50.2
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.++|+|++ | |++||.|++|||..+.+ .++...+|+.... +..+.|+|.|.
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~-g~~v~l~v~R~ 62 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQA-GDRVRVTFIRD 62 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCT-TCCEEEEEEET
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCC-CCEEEEEEEEC
Confidence 67899999999999998 8 99999999999999986 5788888876521 45699999983
No 176
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.34 E-value=9.1e-08 Score=89.43 Aligned_cols=50 Identities=20% Similarity=0.414 Sum_probs=43.6
Q ss_pred cccCccccCChHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEe
Q psy18026 191 EELSLTINTDMATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFI 241 (246)
Q Consensus 191 ~~~~l~v~~~~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~ 241 (246)
...++++.++|..||..|..|++|++||||+|++++||++|+|+| ++.++
T Consensus 12 ~~~~~~~~~~~e~lv~~M~~~~~Gv~i~~~~~~~~~~p~~F~Gsd-~V~WL 61 (424)
T 2pbi_A 12 YRPRMAFLQKIEALVKDMQNPETGVRMHNQRVLVTSVPHAMTGGD-VLQWI 61 (424)
T ss_dssp BCCCCTHHHHHHHHHHHHTCTTTSCCCCCCSSCCCSSCCCEEHHH-HHHHH
T ss_pred CCCcchhhhhHHHHHHHHhCCCCCCCccceeecceeCCCccccHH-HHHHH
Confidence 345688889999999999999999999999999999999999974 44443
No 177
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.30 E-value=3.4e-07 Score=67.66 Aligned_cols=57 Identities=19% Similarity=0.365 Sum_probs=48.1
Q ss_pred CeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 64 GIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 64 gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
|++|..|.++|||++ | |++||.|++|||..+.+ .+++..+|+... .+..|.|+|.|.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKK-AGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCC-SSCEECEEEESS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCC-CCCEEEEEEEEC
Confidence 678999999999999 8 99999999999999986 578888887651 145699999983
No 178
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.27 E-value=3.4e-06 Score=63.91 Aligned_cols=56 Identities=27% Similarity=0.469 Sum_probs=49.2
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..+++|..|.++++|+++| |++||.|++|||..+.+ .++....|+ . +..+.|+|.|
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~---g~~v~l~v~R 89 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-T---ESPLLLEVRR 89 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-H---CSSEEEEEEE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-C---CCeEEEEEEE
Confidence 5789999999999999999 99999999999999985 577777774 3 5679999987
No 179
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.24 E-value=3.8e-06 Score=66.11 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=49.3
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..+++|..|.+||||+ +| |++||.|++|||..+.+ .++....+.... .+..++|+|.|
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R 113 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHS-IGDTIKITYYR 113 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSS-TTCEEEEEEEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCC-CCCEEEEEEEE
Confidence 5789999999999999 88 99999999999999986 567777787641 14569999988
No 180
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.23 E-value=2.4e-06 Score=72.05 Aligned_cols=61 Identities=21% Similarity=0.369 Sum_probs=49.3
Q ss_pred CCCCeEEEEecCCChhhhcCCCCCC-CEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 61 GDGGIYVGSIMKGGAVALDGRIEPG-DMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 61 ~~~gi~I~~V~~gg~A~~~GrL~~G-D~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
...|++|..|.++|||+++| |++| |+|++|||..+.++..... .+++... +..+.|+|.|.
T Consensus 14 ~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~--g~~v~l~v~R~ 75 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANV--EKPVKMLIYSS 75 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTT--TSCEEEEEEET
T ss_pred CCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCC--CCEEEEEEEec
Confidence 46889999999999999999 9999 9999999999998754332 4444431 45699999884
No 181
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.22 E-value=3.9e-06 Score=62.16 Aligned_cols=56 Identities=23% Similarity=0.260 Sum_probs=47.1
Q ss_pred EEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 66 YVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 66 ~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
+|..|.++|+|+++| |++||+|++|||..+.+ .+++...|..... +..+.|+|.|.
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~-~~~v~l~v~R~ 60 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIG-DESTTITVAPF 60 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTT-CSEEEEEEECT
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcC-CCcEEEEEEEC
Confidence 688999999999999 99999999999999986 5788888876521 24699999983
No 182
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.21 E-value=2.5e-06 Score=62.01 Aligned_cols=57 Identities=16% Similarity=0.234 Sum_probs=47.7
Q ss_pred CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..++|..|.++++|+++| |+.||.|++|||..+.+ .+++...|+.. .+..+.|+|.|
T Consensus 4 ~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~--~g~~v~l~v~R 60 (91)
T 2zpm_A 4 IEPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDN--PGXSLALEIER 60 (91)
T ss_dssp --CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHC--TTCCEEEEEEE
T ss_pred cCeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcC--CCCeEEEEEEE
Confidence 346788999999999999 99999999999999985 67888888765 14569999987
No 183
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.16 E-value=4.1e-06 Score=60.83 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=47.4
Q ss_pred CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.|++|..+.++++|+++| |++||.|++|||..+.+ .++..+++..... +..+.|+|.|.
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~~-g~~v~l~v~R~ 77 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNE-MTEMSLTVERD 77 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGGG-CSEEEEEEEET
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCC-CCEEEEEEEEC
Confidence 467788888888999999 99999999999999986 5677777765421 45699999873
No 184
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.09 E-value=2.8e-06 Score=78.88 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=55.5
Q ss_pred CCcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 46 VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 46 ~~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|+||.+....+....-.++|..|.+||||+++| |++||+|++|||..+.++. +.++++.. +..|+|+|.|.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~---g~~v~l~v~R~ 145 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGS---TRQLQIGVYKE 145 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCS---CEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCC---CCEEEEEEEeC
Confidence 46677777654321011148899999999999999 9999999999999999874 55666653 56699999884
No 185
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.08 E-value=8.6e-06 Score=68.63 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=56.8
Q ss_pred CcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCC-CCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 47 NFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEP-GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 47 ~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~-GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..||+.+...... ....|++|..|.++|+|+++| |++ ||.|++|||. +. +.++..++++.. .+..+.|+|.|
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~--~g~~v~l~v~r 168 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETH--EAKPLKLYVYN 168 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHT--TTSCEEEEEEE
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhC--CCCeEEEEEEE
Confidence 4689988753221 123789999999999999999 999 9999999997 54 457778888775 25569999987
Q ss_pred c
Q psy18026 125 C 125 (246)
Q Consensus 125 ~ 125 (246)
.
T Consensus 169 ~ 169 (209)
T 3rle_A 169 T 169 (209)
T ss_dssp T
T ss_pred C
Confidence 3
No 186
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.08 E-value=1.4e-05 Score=71.42 Aligned_cols=70 Identities=21% Similarity=0.372 Sum_probs=54.9
Q ss_pred cccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 48 FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 48 ~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
.||+.+.... ...+++|..|.+|+||+++| |++||.|++|||..+.+ ..+...+|.... .+..|+|+|.|
T Consensus 230 ~lGi~~~~~~---~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R 299 (324)
T 1y8t_A 230 SLGVQVTNDK---DTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKA-PGATVALTFQD 299 (324)
T ss_dssp ECCEEEESCS---SSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTSC-TTCEEEEEEEC
T ss_pred ccceEeeecc---CCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcC-CCCEEEEEEEE
Confidence 4566554322 26789999999999999999 99999999999999986 567777776531 14569999987
No 187
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.03 E-value=2.1e-05 Score=70.25 Aligned_cols=60 Identities=25% Similarity=0.305 Sum_probs=51.3
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..+++|..|.+++||+++| |++||.|++|||..+.+ .++...+|+... .+..|.|+|.|.
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 302 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIR-PGSVIPVVVMRD 302 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSC-TTCEEEEEEESS
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 4789999999999999999 99999999999999986 578888887631 145699999983
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.98 E-value=1.7e-05 Score=74.13 Aligned_cols=58 Identities=28% Similarity=0.437 Sum_probs=52.5
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.+|++|+++| |++||+|++|||..+.+ .++..++|+.. ++.+.|+|.|.
T Consensus 362 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~ 419 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAK---PAIIALQIVRG 419 (436)
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhC---CCeEEEEEEEC
Confidence 3689999999999999999 99999999999999985 68999999886 67899999983
No 189
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.97 E-value=1.3e-05 Score=77.98 Aligned_cols=69 Identities=13% Similarity=0.262 Sum_probs=55.2
Q ss_pred CcccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 47 NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 47 ~~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..||+.+... .++++|..|.+||||+++| |++||+|++|||..+. .++..++|+... .+..|+|+|.|.
T Consensus 485 ~~lG~~~~~~-----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~---~~~l~~~l~~~~-~g~~v~l~v~R~ 553 (597)
T 4fgm_A 485 VNFGAKYKAS-----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT---EQSVKRILERYI-PGDTVTIHAFRR 553 (597)
T ss_dssp CCCSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC---TTTHHHHHTTCC-TTCEEEEEEEET
T ss_pred cccceEEecc-----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC---HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 4789988763 5689999999999999999 9999999999999995 345556665431 155699999983
No 190
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.91 E-value=2.9e-05 Score=70.46 Aligned_cols=60 Identities=20% Similarity=0.338 Sum_probs=51.4
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.+||||+++| |++||.|++|||..+.+ .++...+|+... .+..|+|+|.|.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 321 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTE-PGTKVKLGLLRN 321 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSC-TTCEEEEEEEET
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 4789999999999999999 99999999999999985 678888887641 145699999983
No 191
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.90 E-value=4.2e-05 Score=59.62 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=47.4
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r 124 (246)
..+++|..|.++++|+++ |++||.|++|||..+.+ .++....++... .+..+.|+| |
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~-~g~~v~l~V-R 80 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTIS-VGEVINITT-D 80 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCC-TTCEEEEEE-T
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcC-CCCEEEEEE-E
Confidence 678999999999999987 99999999999999986 577777777431 145689999 7
No 192
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.90 E-value=2e-05 Score=73.55 Aligned_cols=60 Identities=20% Similarity=0.364 Sum_probs=49.6
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.++|+|+++| |+.||+|++|||..+.++ ++....+.... .+..|+|+|.|.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~-~g~~v~l~v~R~ 321 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTE-PGTKVKLGLLRN 321 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcC-CCCEEEEEEEEC
Confidence 4789999999999999999 999999999999999864 66666666431 145699999883
No 193
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.89 E-value=2e-05 Score=59.18 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=44.9
Q ss_pred CeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 64 GIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 64 gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
|++|..+.++++|++.| |++||.|++|||..+.++ ++...++.... .+..+.|+|.|.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~-~g~~v~l~v~R~ 95 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMN-EMTEMSLTVERD 95 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHT-TCSEEEEEEEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcC-CCCeEEEEEEEC
Confidence 56677777888889999 999999999999999875 45556666531 145699999873
No 194
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.84 E-value=5.5e-05 Score=70.99 Aligned_cols=59 Identities=20% Similarity=0.391 Sum_probs=50.2
Q ss_pred CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.|++|..|.++|+|+++| |+.||+|++|||..+.+ .++....+.... .+..|.|+|.|.
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~~~-~g~~v~l~V~R~ 340 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISLLR-VGSTVKIIVERD 340 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHTSC-TTCEEEEEEEET
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 799999999999999999 99999999999999986 467777777542 145699999983
No 195
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.83 E-value=2.7e-05 Score=73.13 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=51.4
Q ss_pred CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.|++|..|.+||+|+++| |++||.|++|||..+.+ .++..++|+.. +..+.|+|.|.
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~ 442 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEK---KKELLVQVLRG 442 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSS---CSCEEEEEEET
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcC---CCeEEEEEEEC
Confidence 589999999999999999 99999999999999985 58899999875 67799999883
No 196
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.80 E-value=6e-05 Score=67.58 Aligned_cols=57 Identities=18% Similarity=0.476 Sum_probs=49.9
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.++|+|+++| |++||.|++|||..+.+ .++..+.|+. ...+.|+|.|.
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~----~~~v~l~v~R~ 311 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRRG 311 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT----CSSEEEEEEET
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 4689999999999999999 99999999999999985 6778888864 45699999983
No 197
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.77 E-value=5.2e-05 Score=68.61 Aligned_cols=59 Identities=22% Similarity=0.353 Sum_probs=50.1
Q ss_pred CCeEEEEecCCChhhhcCCCCC-----------CCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEP-----------GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~-----------GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.|++|..|.++|||+++| |++ ||.|++|||..+.++ ++....|.... .+..|+|+|.|.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~-~g~~v~l~v~R~ 320 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCK-VGDEVTVEVLRG 320 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCC-TTCEEEEEEECS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCC-CcCEEEEEEEEC
Confidence 699999999999999999 999 999999999999874 77888886531 145699999983
No 198
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=97.76 E-value=6.7e-06 Score=64.61 Aligned_cols=50 Identities=18% Similarity=0.211 Sum_probs=43.7
Q ss_pred ccCccccCChHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEee
Q psy18026 192 ELSLTINTDMATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFIY 242 (246)
Q Consensus 192 ~~~l~v~~~~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~~ 242 (246)
...|..+.++..|+..|..|+.|+.++||+|...++|++|+|+ |++.++.
T Consensus 9 s~~l~~~~~l~~Lv~~Mqd~~~GV~~~~r~~~~~~~~~cF~Gs-dlVdWLl 58 (127)
T 2cso_A 9 SIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKIFNHCFTGN-CVIDWLV 58 (127)
T ss_dssp CCSSCTTCCHHHHHHHHHSSSSSCCCEEEEETTEEEEEEEEHH-HHHHHHH
T ss_pred cccCCCccCHHHHHHHHhCCCCCceeeeEEeccEEecceeech-HHHHHHH
Confidence 3467778999999999999999999999999999999999996 5655543
No 199
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=97.72 E-value=5.7e-06 Score=63.34 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=38.2
Q ss_pred cCChHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEe
Q psy18026 198 NTDMATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFI 241 (246)
Q Consensus 198 ~~~~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~ 241 (246)
..++..|+..|..|+.|+.++||+|...++|++|+|+ |++.++
T Consensus 5 ~~~l~~Lv~~Mqd~~~Gv~~~~r~~~~~~~~~cF~Gs-elVdWL 47 (109)
T 1uhw_A 5 SSGLGALYLSMKDPEKGIKELNLEKDKKVFNHCLTGS-GVIDWL 47 (109)
T ss_dssp STTHHHHHHHHHCTTTSCCCEEEESSSCEEEEECCHH-HHHHHH
T ss_pred ccCHHHHHHHHhCCCCCceeeeeEECCEEccccccch-HHHHHH
Confidence 4689999999999999999999999999999999996 555443
No 200
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=97.67 E-value=1.1e-05 Score=62.78 Aligned_cols=44 Identities=18% Similarity=0.296 Sum_probs=38.1
Q ss_pred cCChHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEee
Q psy18026 198 NTDMATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFIY 242 (246)
Q Consensus 198 ~~~~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~~ 242 (246)
.+++..|+..|..|++|+.+|+|+|...++|++|+|+ |++.++.
T Consensus 5 ~~~l~~L~~~m~~~~~Gv~i~~rr~~~k~y~~cF~Gs-dlVdWL~ 48 (120)
T 1v3f_A 5 SSGLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGS-SLVDWLI 48 (120)
T ss_dssp CSHHHHHHHHHTCSSSSCCCCCCCSSSSCCSSCEEHH-HHHHHHH
T ss_pred cccHHHHHHHHhCccCCCeeeeeEEccEEccceeehH-HHHHHHH
Confidence 3678899999999999999999999999999999995 4554443
No 201
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.58 E-value=0.00016 Score=73.30 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=59.1
Q ss_pred CCCcccEEEEcccCCCCCCCeEEEEecCC--------ChhhhcC-CCCCCCEEEEECCeecccCCHHHHHHHHHhccCCC
Q psy18026 45 TVNFLGISIVGQSNKGGDGGIYVGSIMKG--------GAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (246)
Q Consensus 45 ~~~~LG~sI~gg~~~~~~~gi~I~~V~~g--------g~A~~~G-rL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~ 115 (246)
...++|+.+.-. +.+++|..|.+| +||+++| .|+ ||+|++|||..+.++. +++.+|+... +
T Consensus 735 ~~~g~G~~~~~~-----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~--g 804 (1045)
T 1k32_A 735 RSGRIACDFKLD-----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKA--G 804 (1045)
T ss_dssp CCCBCSEEEEEE-----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTT--T
T ss_pred ccceecEEEEEe-----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCC--C
Confidence 346899988753 678999999998 9999999 489 9999999999999875 7888998761 4
Q ss_pred CcEEEEEEec
Q psy18026 116 GPIKLVVAKC 125 (246)
Q Consensus 116 ~~V~L~V~r~ 125 (246)
..|+|+|.|.
T Consensus 805 ~~v~l~v~r~ 814 (1045)
T 1k32_A 805 TSARIRLSGK 814 (1045)
T ss_dssp SEEEEEEECS
T ss_pred CEEEEEEECC
Confidence 4599999983
No 202
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.56 E-value=1.1e-05 Score=75.81 Aligned_cols=68 Identities=25% Similarity=0.411 Sum_probs=0.0
Q ss_pred ccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 49 LGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 49 LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
+|+.+.... ...+++|..|.+|++|++.| |++||.|++|||..+.+ .++..++|+.. .+.+.|+|.|.
T Consensus 372 ~G~~l~~~~---~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~---~~~v~l~v~R~ 439 (448)
T 1ky9_A 372 EGAEMSNKG---KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSK---PSVLALNIQRG 439 (448)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred cceEeeccC---CCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcC---CCeEEEEEEEC
Confidence 466664321 25789999999999999999 99999999999999984 67888899876 56789999873
No 203
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.27 E-value=3.9e-05 Score=68.85 Aligned_cols=57 Identities=16% Similarity=0.394 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.+||||+++| |++||.|++|||..+.+ .++...+|+. +..|+|+|.|.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R~ 309 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR----ESTLNMVVRRG 309 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 4689999999999999999 99999999999999975 5667777763 45699999883
No 204
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.22 E-value=0.00016 Score=67.71 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=49.2
Q ss_pred CCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy18026 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 63 ~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
.+++|..|.+|++|+++| |++||.|++|||..+.++ .+...++.... .+..|.|+|.|.
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~-~g~~v~l~v~R~ 344 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMP-VGSKLTLGLLRD 344 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSB-TTCCCEEEEESS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcC-CCCEEEEEEEEC
Confidence 689999999999999999 999999999999999875 56777776421 145699999873
No 205
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.60 E-value=0.0045 Score=59.40 Aligned_cols=61 Identities=10% Similarity=0.187 Sum_probs=44.7
Q ss_pred CCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCH--------HHHHHHHHhccCCCCcEEEEEEec
Q psy18026 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSN--------DEAVRVLREVVQKPGPIKLVVAKC 125 (246)
Q Consensus 62 ~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~--------~eav~lLr~~~~~~~~V~L~V~r~ 125 (246)
..|++|..|.+||||++ + |+.||.|++|||..+.+... .....++.... -+..|+|+|.|.
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~-~Gd~v~l~v~R~ 344 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKF-AGDIAEIGIIRA 344 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSC-TTCEEEEEEEET
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCC-CCCEEEEEEEEC
Confidence 57999999999999986 5 99999999999999865321 11223444331 145599999983
No 206
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.88 E-value=0.02 Score=54.92 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=48.9
Q ss_pred CCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCCCCcEEEEEE
Q psy18026 61 GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVA 123 (246)
Q Consensus 61 ~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~~~~V~L~V~ 123 (246)
+..+++|+.|.++++|+..| ++.||.|++|||+.+.+ .++..++|+++. .+.+.|.+.
T Consensus 413 ~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s--~~~l~~~l~~~k--~~~l~~~~~ 470 (539)
T 4fln_A 413 GEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRN--IHHLAHLIDMCK--DKYLVFEFE 470 (539)
T ss_dssp TCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCS--HHHHHHHHHTCC--SSEEEEEET
T ss_pred CceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCC--HHHHHHHHHHcC--CCeEEEEEC
Confidence 46789999999999999988 99999999999999996 788999999982 333665543
No 207
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.69 E-value=0.064 Score=40.29 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=29.3
Q ss_pred hHHHHHhhCCCCCCccccCceeeeeecccceeeccceEEEe
Q psy18026 201 MATIVRVMARPESGLEIRDRMWLKITIPNAFIGKCERIIFI 241 (246)
Q Consensus 201 ~~~v~~~m~~p~sgl~~~~r~wlki~~~~~~~g~~~~~~~~ 241 (246)
...|++.|. +|+.||||.|..=+.+++|+|+ |++.++
T Consensus 14 w~~ii~~~~---~g~~ikdrr~~lk~y~~CF~Gs-E~VdWL 50 (105)
T 2ysr_A 14 WNEVTTSFR---AGMPLRKHRQHFKKYGNCFTAG-EAVDWL 50 (105)
T ss_dssp HHHHHHHHH---HSCSCCCCCCSSSSCSSCEEHH-HHHHHH
T ss_pred HHHHHHHHH---cCCCcceeeeCCEECCccccch-HHHHHH
Confidence 445777775 7999999999999999999994 444443
No 208
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=55.78 E-value=11 Score=36.17 Aligned_cols=42 Identities=26% Similarity=0.472 Sum_probs=29.4
Q ss_pred cccEEEEcccCCCCCCCeEEEEecCCChhhhcCCCCCCCEEEEECCeeccc
Q psy18026 48 FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFEN 98 (246)
Q Consensus 48 ~LG~sI~gg~~~~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il~VNg~~~~~ 98 (246)
.+||.+.-. .++.+||..+..... .+..||+|+.|||+++..
T Consensus 85 ~~Pf~vki~----iDG~i~V~dv~~~~s-----~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 85 YLPYTVQKS----SDGRFYFVDIMTFSS-----EIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp ECSEEEEEC----TTSCEEEEEECSSCC-----SSCTTCEEEEETTEEHHH
T ss_pred cCCeEEEEE----ECCcEEEEecccccc-----CCCCCCEEEEECCccHHH
Confidence 467765511 256689877644322 399999999999998864
No 209
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=38.04 E-value=4.4 Score=34.99 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=25.6
Q ss_pred ccccCChHHHHHhhCCCCCCccccC--ceeeeee-cccceee
Q psy18026 195 LTINTDMATIVRVMARPESGLEIRD--RMWLKIT-IPNAFIG 233 (246)
Q Consensus 195 l~v~~~~~~v~~~m~~p~sgl~~~~--r~wlki~-~~~~~~g 233 (246)
+.-|+|...+.=..+..-.||+|++ -.|+.++ +|.+||-
T Consensus 171 ~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vV 212 (280)
T 3on7_A 171 AAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIII 212 (280)
T ss_dssp EEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEE
T ss_pred ccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEE
Confidence 4456776644333344568999975 4899986 6777763
No 210
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=35.62 E-value=5.3 Score=34.94 Aligned_cols=40 Identities=30% Similarity=0.521 Sum_probs=26.1
Q ss_pred CccccCChHHHHHhhCCCCCCccccC--ceeeeee-cccceee
Q psy18026 194 SLTINTDMATIVRVMARPESGLEIRD--RMWLKIT-IPNAFIG 233 (246)
Q Consensus 194 ~l~v~~~~~~v~~~m~~p~sgl~~~~--r~wlki~-~~~~~~g 233 (246)
.+.-|+|...+.=..+..-.||+|++ -.|+.++ +|.+||-
T Consensus 187 g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vV 229 (312)
T 3oox_A 187 RAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVI 229 (312)
T ss_dssp CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEE
T ss_pred CccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEE
Confidence 34456776654333344578999964 4799996 6777753
No 211
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=31.62 E-value=33 Score=26.49 Aligned_cols=35 Identities=14% Similarity=0.330 Sum_probs=25.7
Q ss_pred CChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 73 gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
|.+..-..++++|..|++|.|++ .+.|.+.|+.+.
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv~-----~~~A~eAlr~a~ 122 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGVA-----ENIARRAVAIAA 122 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSSC-----TTHHHHHHHHHH
T ss_pred CCceEEEEEECCCCEEEEEecCC-----HHHHHHHHHHHH
Confidence 45555667799999999999943 456777777663
No 212
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=31.12 E-value=4.9 Score=35.47 Aligned_cols=39 Identities=13% Similarity=0.217 Sum_probs=26.4
Q ss_pred CccccCChHHHHHhhCCCCCCcccc--Cceeeeee-cccceee
Q psy18026 194 SLTINTDMATIVRVMARPESGLEIR--DRMWLKIT-IPNAFIG 233 (246)
Q Consensus 194 ~l~v~~~~~~v~~~m~~p~sgl~~~--~r~wlki~-~~~~~~g 233 (246)
-+.-|+|...+.=..+..-.||+|+ |- |+.++ +|.+||-
T Consensus 210 g~~~HtD~g~lTlL~qd~v~GLQV~~~~g-Wi~V~p~pgalvV 251 (331)
T 1odm_A 210 SFEWHEDVSLITVLYQSNVQNLQVETAAG-YQDIEADDTGYLI 251 (331)
T ss_dssp EEEEECCSSSEEEEEECSSCCEEEEETTE-EEECCCCTTSEEE
T ss_pred ccccccCCCeEEEEeeCCCCCEEEEcCCC-eEECCCCCCeEEE
Confidence 4556777765444444566899997 44 99986 6777763
No 213
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=30.14 E-value=39 Score=26.84 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=30.1
Q ss_pred CChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC-CCcEEEEEE
Q psy18026 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVA 123 (246)
Q Consensus 73 gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~-~~~V~L~V~ 123 (246)
|.+..-..++++|..|++|.|++.. .|.+.|+.+.++ +....+++.
T Consensus 106 G~p~~wvArVk~G~ilfei~gv~~~-----~A~eAlr~A~~KlP~ktkiv~~ 152 (157)
T 1ffk_F 106 GKSVGTAARSHGANHDFIAWVNPDP-----AVEFAWRRAYMKVTPTVNIDSS 152 (157)
T ss_pred CCccEEEEEEcCCCEEEEEeccCHH-----HHHHHHHHHHhhCCCcEEEEEe
Confidence 4444445569999999999887544 677778776443 333455443
No 214
>2pa2_A 60S ribosomal protein L10; QM protein, , structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Homo sapiens} SCOP: d.41.4.1
Probab=27.20 E-value=35 Score=26.96 Aligned_cols=49 Identities=22% Similarity=0.395 Sum_probs=30.5
Q ss_pred CChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccCC-CCcEEEEEEe
Q psy18026 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAK 124 (246)
Q Consensus 73 gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~~-~~~V~L~V~r 124 (246)
|.+..-..++++|..|++|.+..+ +.+.|.+.|+.+.++ +....+++.+
T Consensus 89 G~p~~wvArVk~G~ilfei~~~~v---~~~~A~eAlr~A~~KlP~ktkiv~~~ 138 (151)
T 2pa2_A 89 GKPQGTVARVHIGQVIMSIRTKLQ---NKEHVIEALRRAKFKFPGRQKIHISK 138 (151)
T ss_dssp ----CCEEEECTTBEEEEEEECGG---GHHHHHHHHHHHGGGSSSCEEEEEES
T ss_pred CCccEEEEEECCCCEEEEEECCCC---CHHHHHHHHHHHHhhCCCcEEEEEec
Confidence 334334456899999999987444 356777788776543 4456666654
No 215
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=25.22 E-value=41 Score=25.30 Aligned_cols=36 Identities=14% Similarity=0.275 Sum_probs=25.9
Q ss_pred CChhhhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 73 gg~A~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
|.+..-..++++|..|++|.| + .+.+.|.+.|+.+.
T Consensus 75 G~~~~wva~Vk~G~ilfEi~g-~---~~~~~a~eAlr~a~ 110 (118)
T 2ftc_I 75 GAIDHYVTPVKAGRLVVEMGG-R---CEFEEVQGFLDQVA 110 (118)
T ss_pred CCccEEEEEECCCCEEEEEec-c---CCHHHHHHHHHHHH
Confidence 334444445889999999998 2 45688888888773
No 216
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=24.37 E-value=80 Score=26.37 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.4
Q ss_pred cCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 79 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 79 ~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
.|.+..|+.++-|+++-.+|-|..+++++|++.
T Consensus 131 ~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 163 (234)
T 3m3h_A 131 EGKAEKGQKVVVVEDLISTGGSAITCVEALREA 163 (234)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred ecccCCCCEEEEEecccchhHHHHHHHHHHHHC
Confidence 355789999999999999999999999999998
No 217
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=24.28 E-value=26 Score=27.15 Aligned_cols=32 Identities=13% Similarity=0.314 Sum_probs=25.0
Q ss_pred hhcCCCCCCCEEEEECCeecccCCHHHHHHHHHhccC
Q psy18026 77 ALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (246)
Q Consensus 77 ~~~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~~ 113 (246)
.-..++++|..|++|.|+ +.+.|.+.|+.+.+
T Consensus 91 ~wva~Vk~G~ilfEi~g~-----~~~~A~eAlr~a~~ 122 (136)
T 3r8s_M 91 YWVALIQPGKVLYEMDGV-----PEELAREAFKLAAA 122 (136)
T ss_dssp EEEEEECTTCEEEEEESS-----CHHHHHHHHHHHHT
T ss_pred EEEEEECCCCEEEEEeCC-----CHHHHHHHHHHHHh
Confidence 334468999999999984 57788889988754
No 218
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=22.67 E-value=90 Score=26.24 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=30.4
Q ss_pred cCCCCCCCEEEEECCeecccCCHHHHHHHHHhc
Q psy18026 79 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (246)
Q Consensus 79 ~GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~ 111 (246)
.|.+..|+.++-|+++-.+|-|..+++++|++.
T Consensus 143 eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 175 (243)
T 3dez_A 143 EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQRE 175 (243)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred EeccCCCCEEEEEEeeccccHHHHHHHHHHHHC
Confidence 355788999999999999999999999999998
No 219
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=21.32 E-value=37 Score=25.49 Aligned_cols=21 Identities=10% Similarity=0.033 Sum_probs=15.5
Q ss_pred CCccccCceeeeeecccceeec
Q psy18026 213 SGLEIRDRMWLKITIPNAFIGK 234 (246)
Q Consensus 213 sgl~~~~r~wlki~~~~~~~g~ 234 (246)
.|..+.-| |++|.||..||+.
T Consensus 79 ~~~~~c~r-~~~~~iP~~yi~k 99 (117)
T 3uaf_A 79 HRDSNATN-PIQIDVIPLFLPS 99 (117)
T ss_dssp CTTTCCCC-CEEEECCSCCTTS
T ss_pred CCCCCcce-EEEEeCCHHhCCC
Confidence 35555555 5699999999974
No 220
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=20.74 E-value=89 Score=25.13 Aligned_cols=33 Identities=33% Similarity=0.447 Sum_probs=29.8
Q ss_pred CCCCCCCEEEEECCeecccCCHHHHHHHHHhcc
Q psy18026 80 GRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (246)
Q Consensus 80 GrL~~GD~Il~VNg~~~~~~s~~eav~lLr~~~ 112 (246)
|.+..|..++-|+++-.+|-|..+++++|++.+
T Consensus 106 g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~G 138 (205)
T 2wns_A 106 GTINPGETCLIIEDVVTSGSSVLETVEVLQKEG 138 (205)
T ss_dssp SCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEEEeccccHHHHHHHHHHHHCC
Confidence 456689999999999999999999999999983
No 221
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=20.47 E-value=1.2e+02 Score=23.06 Aligned_cols=38 Identities=24% Similarity=0.338 Sum_probs=24.1
Q ss_pred CcccEEEEcccCC-CCCCCeEEEEecCCChhhhcCCCCCCCEEE
Q psy18026 47 NFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMIL 89 (246)
Q Consensus 47 ~~LG~sI~gg~~~-~~~~gi~I~~V~~gg~A~~~GrL~~GD~Il 89 (246)
.|+||-...+.+- ++..-+||+. +-..+-| |+.||.|.
T Consensus 60 dG~GFlr~~~~~y~~~~~DiyVs~----~~irrf~-lr~GD~V~ 98 (130)
T 1a62_A 60 DGFGFLRSADSSYLAGPDDIYVSP----SQIRRFN-LRTGDTIS 98 (130)
T ss_dssp TSCEEEECGGGTTCCCTTCEEECH----HHHHHTT-CCTTCEEE
T ss_pred CCeEEEecCCcCCCCCCCCEEECH----HHHhHhC-CCCCCEEE
Confidence 5789988763111 2367899853 2333335 99999886
No 222
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=20.37 E-value=13 Score=33.07 Aligned_cols=39 Identities=15% Similarity=0.512 Sum_probs=26.9
Q ss_pred CccccCChHHHHHhhCCCCCCcccc-Cceeeeee-ccccee
Q psy18026 194 SLTINTDMATIVRVMARPESGLEIR-DRMWLKIT-IPNAFI 232 (246)
Q Consensus 194 ~l~v~~~~~~v~~~m~~p~sgl~~~-~r~wlki~-~~~~~~ 232 (246)
.+.-|+|...+.=.++..-.||+|+ |-.|+.+. +|.+||
T Consensus 228 g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalv 268 (356)
T 1gp6_A 228 GVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIV 268 (356)
T ss_dssp SEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEE
T ss_pred CcCCccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEE
Confidence 3455777765444444557899997 45899986 677775
Done!