BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18027
(165 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 785 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 843
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 844 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 875
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 786 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 844
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 845 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 876
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 786 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 844
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 845 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 876
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 785 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 843
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 844 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 875
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 785 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 843
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 844 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 875
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 786 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 844
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 845 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 876
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 782 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 840
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 841 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 872
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 786 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 844
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 845 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 876
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 792 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 850
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 851 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 882
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 790 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 848
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 849 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 880
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 790 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 848
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 849 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 880
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 786 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHILGNYKSFLGINKERVPFV 844
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 845 LTPDFLFV---MGTSGKKT-SPHFQKFQDVCVKAYL 876
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ ++TG IDFG+ G L I E +PF
Sbjct: 787 FVYSCAGYCVATFVLGIGDRHNDNIMI-SETGNLFHIDFGHILGNYKSFLGINKERVPFV 845
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ + H + + K++L
Sbjct: 846 LTPDFLFV---MGTSGKKTSL-HFQKFQDVCVKAYL 877
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ ++TG IDFG+ G L I E +PF
Sbjct: 787 FVYSCAGYCVATFVLGIGDRHNDNIMI-SETGNLFHIDFGHILGNYKSFLGINKERVPFV 845
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ + H + + K++L
Sbjct: 846 LTPDFLFV---MGTSGKKTSL-HFQKFQDVCVKAYL 877
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFR 80
FV S A C+A + LGIGDRH +N ++ T+TG IDFG+ G L I E +PF
Sbjct: 790 FVYSCAGYCVATFVLGIGDRHNDNIMI-TETGNLFHIDFGHINGNYKSFLGINKERVPFV 848
Query: 81 LTPHILAVNEPYGSQGKRLWVRHLNEIDTLLSKSFL 116
LTP L V G+ GK+ H + + K++L
Sbjct: 849 LTPDFLFV---MGTSGKKT-SPHFQKFQDICVKAYL 880
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 20 NNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFG 65
+ +V+S A C+ Y LG+GDRHL+N L+ TKTG+ IDFGY G
Sbjct: 444 DTYVKSCAGYCVITYILGVGDRHLDN-LLLTKTGKLFHIDFGYILG 488
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 20 NNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFG 65
+ +V+S A C+ Y LG+GDRHL+N L+ TKTG+ IDFGY G
Sbjct: 458 DTYVKSCAGYCVITYILGVGDRHLDN-LLLTKTGKLFHIDFGYILG 502
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 17 RLRNNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-E 75
R F S A C+A Y LGIGDRH +N +V KTG+ IDFG+ G I E
Sbjct: 918 RAIEEFTLSCAGYCVASYVLGIGDRHSDNIMV-KKTGQLFHIDFGHILGNFKSKFGIKRE 976
Query: 76 LMPFRLTPHILAV 88
+PF LT + V
Sbjct: 977 RVPFILTYDFIHV 989
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 20 NNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFG 65
+ +++S A C+ Y LG+GDRHL+N L+ T G+ IDFGY G
Sbjct: 532 DTYIKSCAGYCVITYLLGVGDRHLDNLLLTT-NGKLFHIDFGYILG 576
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 17 RLRNNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFG-VATQLLPIPE 75
R F S A C+A Y LGIGDRH +N ++ ++G+ IDFG+ G T+ E
Sbjct: 760 RAIEEFTLSCAGYCVATYVLGIGDRHSDNIMI-RESGQLFHIDFGHFLGNFKTKFGINRE 818
Query: 76 LMPFRLT 82
+PF LT
Sbjct: 819 RVPFILT 825
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 17 RLRNNFVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFG-VATQLLPIPE 75
R F S A C+A Y LGIGDRH +N ++ ++G+ IDFG+ G T+ E
Sbjct: 766 RAIEEFTLSCAGYCVATYVLGIGDRHSDNIMI-RESGQLFHIDFGHFLGNFKTKFGINRE 824
Query: 76 LMPFRLT 82
+PF LT
Sbjct: 825 RVPFILT 831
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-ELMPFR 80
F RS A C+A + LGIGDRH N +V G+ IDFG+ + E +PF
Sbjct: 791 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 849
Query: 81 LTPHILAV 88
LT L V
Sbjct: 850 LTQDFLIV 857
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-ELMPFR 80
F RS A C+A + LGIGDRH N +V G+ IDFG+ + E +PF
Sbjct: 920 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 978
Query: 81 LTPHILAV 88
LT L V
Sbjct: 979 LTQDFLIV 986
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-ELMPFR 80
F RS A C+A + LGIGDRH N +V G+ IDFG+ + E +PF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 81 LTPHILAV 88
LT L V
Sbjct: 984 LTQDFLIV 991
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-ELMPFR 80
F RS A C+A + LGIGDRH N +V G+ IDFG+ + E +PF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 81 LTPHILAV 88
LT L V
Sbjct: 984 LTQDFLIV 991
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha
Length = 1096
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 22 FVRSYACMCIAQYTLGIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIP-ELMPFR 80
F RS A C+A + LGIGDRH N +V G+ IDFG+ + E +PF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 81 LTPHILAV 88
LT L V
Sbjct: 984 LTQDFLIV 991
>pdb|2CDG|B Chain B, Structure And Binding Kinetics Of Three Different Human
Cd1d-Alpha-Galactosylceramide-Specific T Cell Receptors
(Tcr 5b)
Length = 244
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 48 VCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEP 91
+C + GI++GY+FG T+L + +L ++ P +AV EP
Sbjct: 89 LCASSESRTGINYGYTFGSGTRLTVVEDLN--KVFPPEVAVFEP 130
>pdb|3SR7|A Chain A, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|B Chain B, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|C Chain C, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|D Chain D, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
Length = 365
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 56 VGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNE---PYGSQGKRLWVRHLNEIDTLLS 112
+G+D Y G L + +L P L HI + E P G + R W +HL++ L
Sbjct: 151 IGLDKPYQAG----LQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQ 206
Query: 113 KSFLL 117
F+L
Sbjct: 207 LPFIL 211
>pdb|1FV2|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
pdb|1FV3|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
pdb|1FV3|B Chain B, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
Length = 472
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 91 PYGSQGKRL--WVRHLNEIDTLLSKSFLLSVGVYNQKILE 128
P GS K L WV + +ID +L KS +L++ + N I +
Sbjct: 16 PRGSHMKNLDCWVDNEEDIDVILKKSTILNLDINNDIISD 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.140 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,579,501
Number of Sequences: 62578
Number of extensions: 173214
Number of successful extensions: 499
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 31
length of query: 165
length of database: 14,973,337
effective HSP length: 91
effective length of query: 74
effective length of database: 9,278,739
effective search space: 686626686
effective search space used: 686626686
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)