BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18030
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D855|QCR7_MOUSE Cytochrome b-c1 complex subunit 7 OS=Mus musculus GN=Uqcrb PE=1
SV=3
Length = 111
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 9/119 (7%)
Query: 1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
MA + A SA KW GFRK W + +GF K GL DD +ET V+EA+RRL
Sbjct: 1 MAGRSAVSASSKW---LDGFRK------WYYNAAGFNKLGLMRDDTLHETEDVKEAIRRL 51
Query: 61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
PE L N+R R RA+ L ++ ILPKDQWTKYE++ YL+PY+++V +E KE+EEW K
Sbjct: 52 PEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 110
>sp|P14927|QCR7_HUMAN Cytochrome b-c1 complex subunit 7 OS=Homo sapiens GN=UQCRB PE=1
SV=2
Length = 111
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 9/119 (7%)
Query: 1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
MA K+A SA KW ++KW + +GF K GL DD E V+EA+RRL
Sbjct: 1 MAGKQAVSASGKW---------LDGIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51
Query: 61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
PE L N+R FR RA+ LN++ ILPK+QWTKYE+E YL+PY+++V +E KE+EEW K
Sbjct: 52 PENLYNDRMFRIKRALDLNLKHQILPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110
>sp|Q5RC24|QCR7_PONAB Cytochrome b-c1 complex subunit 7 OS=Pongo abelii GN=UQCRB PE=3
SV=3
Length = 111
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 9/119 (7%)
Query: 1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
MA K+A SA KW ++KW + +GF K GL DD E V+EA+RRL
Sbjct: 1 MAGKQAVSASGKW---------LDGIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51
Query: 61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
PE L N+R FR RA+ L+++ ILPK+QWTKYE+E YL+PY+++V +E KE+EEW K
Sbjct: 52 PENLYNDRMFRIKRALDLSLKHQILPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110
>sp|P00129|QCR7_BOVIN Cytochrome b-c1 complex subunit 7 OS=Bos taurus GN=UQCRB PE=1 SV=3
Length = 111
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 9/119 (7%)
Query: 1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
MA + A SA +W ++KW + +GF K GL DD +E V+EA+RRL
Sbjct: 1 MAGRPAVSASSRW---------LEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRL 51
Query: 61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
PE L N+R FR RA+ L++++ ILPK+QWTKYE++ YL+PY+++V +E KE+EEW K
Sbjct: 52 PENLYNDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 110
>sp|O01369|QCR7_FASHE Cytochrome b-c1 complex subunit 7 OS=Fasciola hepatica GN=UBCRBP
PE=3 SV=2
Length = 130
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 30 AWEYSG--FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPK 87
A+++S + + GL Y D+ +P++ EA+RRLP + R FR RA QL+ K++LPK
Sbjct: 31 AFQFSNSYYNQLGLLYHDVIPHSPLIAEAVRRLPREETEARDFRIARAFQLSASKTVLPK 90
Query: 88 DQWTKYEDETRYLKPYIEQVEKEFKEKEEWG 118
+QWT ED+ YL PYIE +KE+KEK EW
Sbjct: 91 EQWTAIEDDIPYLDPYIEVAKKEWKEKAEWD 121
>sp|P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=QCR7 PE=3 SV=1
Length = 127
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 34 SGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
SG+RK GL +DDL E + + ALRRLP R +R + A QL++ +LPKD+WTK
Sbjct: 36 SGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKDKWTK 95
Query: 93 YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
ED+ YL PY+ + E KEKEE L
Sbjct: 96 PEDDIPYLTPYLLEAEAFVKEKEELDNL 123
>sp|O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qcr7 PE=3 SV=1
Length = 137
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 34 SGFRKYGLYYDDLA-NETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
SG+RKYGL YDDL E ++AL RLP+ +R +R RA+QL+I+ ILPK +WTK
Sbjct: 31 SGYRKYGLRYDDLMLEENDDTQKALSRLPKMESYDRVYRIRRAMQLSIENKILPKSEWTK 90
Query: 93 YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
E++ YL+P + +V E KE+E + L
Sbjct: 91 PEEDYHYLRPVLAEVIAERKEREAFDAL 118
>sp|Q751U4|QCR7_ASHGO Cytochrome b-c1 complex subunit 7 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR7
PE=3 SV=1
Length = 126
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 34 SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
SG+R+ GL +DDL A E +V+ ALRRLPE+ R FR ++A QL + +LPK +WTK
Sbjct: 36 SGYRQLGLKFDDLIAEENDIVQTALRRLPEEESYARVFRIIQAHQLELTHHLLPKHKWTK 95
Query: 93 YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
E++ YL PY+ + E KEK E L
Sbjct: 96 PEEDKSYLLPYLLEAEAAAKEKLELDAL 123
>sp|P00128|QCR7_YEAST Cytochrome b-c1 complex subunit 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=QCR7 PE=1 SV=2
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 34 SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
+G++K GL +DDL A E P+++ ALRRLPE R +R +RA Q + +LP+++W K
Sbjct: 36 AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 95
Query: 93 YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
+++ YL PYI + E KEK+E +
Sbjct: 96 AQEDVPYLLPYILEAEAAAKEKDELDNI 123
>sp|Q6FSJ2|QCR7_CANGA Cytochrome b-c1 complex subunit 7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=QCR7 PE=3 SV=1
Length = 128
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 26 LQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
+ K +YSG+RK GL +DDL A E P+++ AL+RLPE R++R +RA Q + K +
Sbjct: 28 VSKQYIKYSGYRKLGLRFDDLIAEENPIMQTALKRLPEGESYARNYRIIRAHQSELTKHL 87
Query: 85 LPKDQWTKYEDETRYLKPYI 104
LP+++W K +D+ YL PYI
Sbjct: 88 LPRNEWVKAQDDVPYLLPYI 107
>sp|O01374|QCR7_SCHMA Cytochrome b-c1 complex subunit 7 OS=Schistosoma mansoni PE=3 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 26 LQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSIL 85
++ + + + + + GL D +PV EALRRLP +L+ R FR RA L K +L
Sbjct: 28 IKMFGFNNAYYNQVGLLKHDWLPHSPVWLEALRRLPRELQEARDFRIARASLLYASKHVL 87
Query: 86 PKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
PK+QWT ED+ YL+PY+ V KE ++ W
Sbjct: 88 PKEQWTTIEDDIPYLEPYVNVVVKEMSDRSNWDNF 122
>sp|Q9GP40|QCR7_ECHMU Cytochrome b-c1 complex subunit 7 OS=Echinococcus multilocularis
GN=UBCRBP PE=2 SV=1
Length = 130
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 36 FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYED 95
+ + GL + D+ VVEEA RRLP + + + FR RA L+ K+IL K++WTK E+
Sbjct: 39 YNQIGLRWHDIMPRNAVVEEAFRRLPREEREDMDFRLARATLLSANKTILSKEEWTKQEE 98
Query: 96 ETRYLKPYIEQVEKEFKEKEEWGKL 120
+ YL PYI+ +E+E + K +W
Sbjct: 99 DVPYLDPYIKLIERELRNKADWDNF 123
>sp|Q6BNQ5|QCR7_DEBHA Cytochrome b-c1 complex subunit 7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=QCR7 PE=3 SV=1
Length = 126
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 24 GALQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
+ K Y+G+R+ GL ++DL ETPV+++A+ RLP++ R++R + A Q ++
Sbjct: 25 SPVAKAFVAYAGYREMGLKFNDLLIEETPVMQKAISRLPDEEIYARNYRFITAHQCSLSH 84
Query: 83 SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
+LP +Q K E++T YL PYI + EKE E+ E +
Sbjct: 85 QLLPANQAVKPEEDTHYLVPYILEAEKEAFERAELDNI 122
>sp|Q871K1|QCR7_NEUCR Cytochrome b-c1 complex subunit 7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=qcr-7 PE=3 SV=1
Length = 123
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 26 LQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
+ W +G+R+ GL DDL + E V AL+RL K +R +R RA QL++ +
Sbjct: 23 VSNWYINAAGYRQMGLRADDLISEENETVLAALQRLSPKESYDRIYRIRRATQLSLTHKL 82
Query: 85 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
LPK++WT E++ YL+P I+Q+E E EK+ L
Sbjct: 83 LPKNEWTTQEEDVPYLRPLIDQIEAEAAEKDALDTL 118
>sp|Q6C3K7|QCR7_YARLI Cytochrome b-c1 complex subunit 7 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=QCR7 PE=3 SV=1
Length = 128
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 26 LQKWAWEYSGFRKYGLYYDDLA-NETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
L K ++SG+R+ G +DL ETP ++ ALRRLP +R +R +RA Q ++ +
Sbjct: 27 LAKTYVKFSGYRQLGFKMNDLIIEETPNMQLALRRLPPTESYDRVYRLIRATQFSLSHKL 86
Query: 85 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
+ TK E++ YL PYI VE E EK+ L
Sbjct: 87 ATGNDITKPEEDDHYLIPYILDVEAEAFEKDALDNL 122
>sp|Q54M82|QCR7_DICDI Probable cytochrome b-c1 complex subunit 7 OS=Dictyostelium
discoideum GN=DDB_G0286171 PE=3 SV=1
Length = 109
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 24 GALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKS 83
+LQK +W +RK GLY+ DL N T +E RRLP + +R R A+ L+++K
Sbjct: 13 SSLQKSSW--VEYRKMGLYFADLYNNTEANQEVYRRLPFDVLVQRDRRLRVAIDLSLKKQ 70
Query: 84 ILPKDQWTKYEDE---TRYLKPYIEQVEKE 110
+LP+ +W+ + + T ++ Y EQVE+E
Sbjct: 71 LLPESEWSDNQKDFEFTEMIEKYTEQVERE 100
>sp|P46268|QCR7_CYBJA Cytochrome b-c1 complex subunit 7 OS=Cyberlindnera jadinii
GN=QCR7 PE=3 SV=1
Length = 126
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 28 KWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILP 86
K YSG+R+ GL +DDL +E P V++AL RLP+ R+FR L A Q I +L
Sbjct: 29 KLFCAYSGYRQLGLKFDDLIHEENPTVQKALSRLPKDEIYARNFRMLTAAQCGITHHLLS 88
Query: 87 KDQWTKYEDET 97
D+ K ++T
Sbjct: 89 ADKALKPSEDT 99
>sp|Q9SUU5|QCR71_ARATH Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana
GN=QCR7-1 PE=1 SV=1
Length = 122
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 34 SGFRKYGLYYDDLANE--TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWT 91
+ R+YGL YDDL ++ + ++EA+ RLP ++ + R+ R RA+ L+++ LPKD
Sbjct: 26 TRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDLQA 85
Query: 92 KYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
YL+ + VE+E KE+E G L
Sbjct: 86 VQTPFRGYLQDMLALVERESKEREALGAL 114
>sp|P48502|QCR7_SOLTU Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum PE=1 SV=1
Length = 123
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 34 SGFRKYGLYYDDLANETPV----VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQ 89
S R YGL +DDL + P+ V+EAL RLP ++ + R+ R LRA+ L+++ LP+D
Sbjct: 27 SRLRNYGLRHDDLYD--PMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKHQYLPEDL 84
Query: 90 WTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
YL+ + V++E E+E G L
Sbjct: 85 QAMQTPFRNYLQEMLALVKRESAEREALGAL 115
>sp|F4JWS8|QCR72_ARATH Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana
GN=QCR7-2 PE=1 SV=1
Length = 122
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 36 FRKYGLYYDDLANETPV----VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWT 91
R+YGL YDDL + P+ ++EAL RLP ++ + R+ R +RA+ L+++ LP +
Sbjct: 28 LRRYGLRYDDLYD--PLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLPDNLQA 85
Query: 92 KYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
YL+ + V++E E+E G L
Sbjct: 86 VQTPFRSYLQDMLALVKRERAEREALGAL 114
>sp|Q9Y753|FDFT_YARLI Squalene synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 445
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 45 DLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLK 101
D+ +E P ++E++ +K+ R +R+ +++ ++ P++ W KY +E R K
Sbjct: 202 DVLHENPRLQESMGLFLQKVNIIRDYRE----DIDVNRAFWPREIWHKYAEEMRDFK 254
>sp|E1BMP7|DNA2_BOVIN DNA replication ATP-dependent helicase/nuclease DNA2 OS=Bos taurus
GN=DNA2 PE=3 SV=3
Length = 1061
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 74 RAVQLNIQKSILPKDQWTKYEDETRYLKP 102
RAV+ ++ S +P W K ++ET++LKP
Sbjct: 407 RAVEQQMEDSSVPTSMWPKIKEETQHLKP 435
>sp|Q9K838|DPO3A_BACHD DNA polymerase III subunit alpha OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=dnaE PE=3 SV=1
Length = 1116
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 53 VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFK 112
+E+ R PE L+N + V+L + K LPK Q + YL+ EQ KE +
Sbjct: 234 MEQTFRAYPEALQNTKKLADRCHVELTLGKPRLPKFQTPNEQSAEDYLRKLCEQGAKE-R 292
Query: 113 EKEEWGK 119
EEW K
Sbjct: 293 YGEEWTK 299
>sp|Q6FRZ9|ATM_CANGA Serine/threonine-protein kinase TEL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TEL1 PE=3 SV=1
Length = 2763
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 29 WAWEYSGFRKYGLYYDD--------LANETPVVEEALRRLPEKLKNERHFRQLRAVQLNI 80
++W S F+K+ YDD N + V+E L + +N++ +R L+ VQ +
Sbjct: 2669 YSWAVSPFKKHKYMYDDNLEGHMTTATNNSKVIERKLTPKLDSDENQQSYRALKGVQEKL 2728
Query: 81 QKSIL 85
++ L
Sbjct: 2729 DRNGL 2733
>sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic disease virus 1 GN=S3
PE=3 SV=1
Length = 899
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 36 FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKY 93
FR+ G YY ++ + P ++ ++ E + E + QLRA + I+ ++W ++
Sbjct: 719 FRQEGFYYTNMLDGPPAIDRVVQYTYEVARFEANMGQLRAA----LRRIMDDERWVRF 772
>sp|Q7RTR0|NALP9_HUMAN NACHT, LRR and PYD domains-containing protein 9 OS=Homo sapiens
GN=NLRP9 PE=2 SV=1
Length = 991
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 67 ERHF--RQLRAVQLNIQKSILPKDQWTKYEDETR-YLKPYIEQVEKEFK---EKE 115
++H+ +Q V LN+ I KD WTK ++E R L PY + +++ F+ EKE
Sbjct: 60 DKHYPGKQAWEVTLNLFLQINRKDLWTKAQEEMRNKLNPYRKHMKETFQLIWEKE 114
>sp|P77743|PRPR_ECOLI Propionate catabolism operon regulatory protein OS=Escherichia
coli (strain K12) GN=prpR PE=1 SV=1
Length = 528
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 36 FRKYGLYYDDLANETPV---VEEALRRLPEKLKNER 68
FR L +D LAN TP+ E+A+ + +KL NER
Sbjct: 26 FRDISLEFDHLANITPIQLGFEKAVTYIRKKLANER 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,192,563
Number of Sequences: 539616
Number of extensions: 1955715
Number of successful extensions: 7123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 7058
Number of HSP's gapped (non-prelim): 85
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)