BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18031
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14927|QCR7_HUMAN Cytochrome b-c1 complex subunit 7 OS=Homo sapiens GN=UQCRB PE=1
SV=2
Length = 111
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 68/95 (71%)
Query: 40 ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 99
++KW + +GF K GL DD E V+EA+RRLPE L N+R FR RA+ LN++ I
Sbjct: 16 GIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRLPENLYNDRMFRIKRALDLNLKHQI 75
Query: 100 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 134
LPK+QWTKYE+E YL+PY+++V +E KE+EEW K
Sbjct: 76 LPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110
>sp|P00129|QCR7_BOVIN Cytochrome b-c1 complex subunit 7 OS=Bos taurus GN=UQCRB PE=1 SV=3
Length = 111
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 40 ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 99
++KW + +GF K GL DD +E V+EA+RRLPE L N+R FR RA+ L++++ I
Sbjct: 16 GIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYNDRVFRIKRALDLSMRQQI 75
Query: 100 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 134
LPK+QWTKYE++ YL+PY+++V +E KE+EEW K
Sbjct: 76 LPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 110
>sp|Q9D855|QCR7_MOUSE Cytochrome b-c1 complex subunit 7 OS=Mus musculus GN=Uqcrb PE=1
SV=3
Length = 111
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%)
Query: 40 ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 99
+KW + +GF K GL DD +ET V+EA+RRLPE L N+R R RA+ L ++ I
Sbjct: 16 GFRKWYYNAAGFNKLGLMRDDTLHETEDVKEAIRRLPEDLYNDRMLRIKRALDLTMRHQI 75
Query: 100 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 134
LPKDQWTKYE++ YL+PY+++V +E KE+EEW K
Sbjct: 76 LPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 110
>sp|Q5RC24|QCR7_PONAB Cytochrome b-c1 complex subunit 7 OS=Pongo abelii GN=UQCRB PE=3
SV=3
Length = 111
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%)
Query: 40 ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 99
++KW + +GF K GL DD E V+EA+RRLPE L N+R FR RA+ L+++ I
Sbjct: 16 GIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRLPENLYNDRMFRIKRALDLSLKHQI 75
Query: 100 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 134
LPK+QWTKYE+E YL+PY+++V +E KE+EEW K
Sbjct: 76 LPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110
>sp|O01369|QCR7_FASHE Cytochrome b-c1 complex subunit 7 OS=Fasciola hepatica GN=UBCRBP
PE=3 SV=2
Length = 130
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 45 AWEYSG--FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPK 102
A+++S + + GL Y D+ +P++ EA+RRLP + R FR RA QL+ K++LPK
Sbjct: 31 AFQFSNSYYNQLGLLYHDVIPHSPLIAEAVRRLPREETEARDFRIARAFQLSASKTVLPK 90
Query: 103 DQWTKYEDETRYLKPYIEQVEKEFKEKEEW 132
+QWT ED+ YL PYIE +KE+KEK EW
Sbjct: 91 EQWTAIEDDIPYLDPYIEVAKKEWKEKAEW 120
>sp|P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=QCR7 PE=3 SV=1
Length = 127
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 49 SGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 107
SG+RK GL +DDL E + + ALRRLP R +R + A QL++ +LPKD+WTK
Sbjct: 36 SGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKDKWTK 95
Query: 108 YEDETRYLKPYIEQVEKEFKEKEEWGKL 135
ED+ YL PY+ + E KEKEE L
Sbjct: 96 PEDDIPYLTPYLLEAEAFVKEKEELDNL 123
>sp|O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qcr7 PE=3 SV=1
Length = 137
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 49 SGFRKYGLYYDDLA-NETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 107
SG+RKYGL YDDL E ++AL RLP+ +R +R RA+QL+I+ ILPK +WTK
Sbjct: 31 SGYRKYGLRYDDLMLEENDDTQKALSRLPKMESYDRVYRIRRAMQLSIENKILPKSEWTK 90
Query: 108 YEDETRYLKPYIEQVEKEFKEKEEWGKL 135
E++ YL+P + +V E KE+E + L
Sbjct: 91 PEEDYHYLRPVLAEVIAERKEREAFDAL 118
>sp|Q6FSJ2|QCR7_CANGA Cytochrome b-c1 complex subunit 7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=QCR7 PE=3 SV=1
Length = 128
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 37 ISGALQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNI 95
I + K +YSG+RK GL +DDL A E P+++ AL+RLPE R++R +RA Q +
Sbjct: 24 ICVPVSKQYIKYSGYRKLGLRFDDLIAEENPIMQTALKRLPEGESYARNYRIIRAHQSEL 83
Query: 96 QKSILPKDQWTKYEDETRYLKPYI 119
K +LP+++W K +D+ YL PYI
Sbjct: 84 TKHLLPRNEWVKAQDDVPYLLPYI 107
>sp|Q751U4|QCR7_ASHGO Cytochrome b-c1 complex subunit 7 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR7
PE=3 SV=1
Length = 126
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 49 SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 107
SG+R+ GL +DDL A E +V+ ALRRLPE+ R FR ++A QL + +LPK +WTK
Sbjct: 36 SGYRQLGLKFDDLIAEENDIVQTALRRLPEEESYARVFRIIQAHQLELTHHLLPKHKWTK 95
Query: 108 YEDETRYLKPYIEQVEKEFKEKEEWGKL 135
E++ YL PY+ + E KEK E L
Sbjct: 96 PEEDKSYLLPYLLEAEAAAKEKLELDAL 123
>sp|P00128|QCR7_YEAST Cytochrome b-c1 complex subunit 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=QCR7 PE=1 SV=2
Length = 127
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 49 SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 107
+G++K GL +DDL A E P+++ ALRRLPE R +R +RA Q + +LP+++W K
Sbjct: 36 AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 95
Query: 108 YEDETRYLKPYIEQVEKEFKEKEEWGKL 135
+++ YL PYI + E KEK+E +
Sbjct: 96 AQEDVPYLLPYILEAEAAAKEKDELDNI 123
>sp|Q9GP40|QCR7_ECHMU Cytochrome b-c1 complex subunit 7 OS=Echinococcus multilocularis
GN=UBCRBP PE=2 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 51 FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYED 110
+ + GL + D+ VVEEA RRLP + + + FR RA L+ K+IL K++WTK E+
Sbjct: 39 YNQIGLRWHDIMPRNAVVEEAFRRLPREEREDMDFRLARATLLSANKTILSKEEWTKQEE 98
Query: 111 ETRYLKPYIEQVEKEFKEKEEWGKL 135
+ YL PYI+ +E+E + K +W
Sbjct: 99 DVPYLDPYIKLIERELRNKADWDNF 123
>sp|O01374|QCR7_SCHMA Cytochrome b-c1 complex subunit 7 OS=Schistosoma mansoni PE=3 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 51 FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYED 110
+ + GL D +PV EALRRLP +L+ R FR RA L K +LPK+QWT ED
Sbjct: 38 YNQVGLLKHDWLPHSPVWLEALRRLPRELQEARDFRIARASLLYASKHVLPKEQWTTIED 97
Query: 111 ETRYLKPYIEQVEKEFKEKEEWGKL 135
+ YL+PY+ V KE ++ W
Sbjct: 98 DIPYLEPYVNVVVKEMSDRSNWDNF 122
>sp|Q6BNQ5|QCR7_DEBHA Cytochrome b-c1 complex subunit 7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=QCR7 PE=3 SV=1
Length = 126
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 37 ISGALQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNI 95
+ + K Y+G+R+ GL ++DL ETPV+++A+ RLP++ R++R + A Q ++
Sbjct: 23 VVSPVAKAFVAYAGYREMGLKFNDLLIEETPVMQKAISRLPDEEIYARNYRFITAHQCSL 82
Query: 96 QKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
+LP +Q K E++T YL PYI + EKE E+ E +
Sbjct: 83 SHQLLPANQAVKPEEDTHYLVPYILEAEKEAFERAELDNI 122
>sp|Q871K1|QCR7_NEUCR Cytochrome b-c1 complex subunit 7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=qcr-7 PE=3 SV=1
Length = 123
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 41 LQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 99
+ W +G+R+ GL DDL + E V AL+RL K +R +R RA QL++ +
Sbjct: 23 VSNWYINAAGYRQMGLRADDLISEENETVLAALQRLSPKESYDRIYRIRRATQLSLTHKL 82
Query: 100 LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
LPK++WT E++ YL+P I+Q+E E EK+ L
Sbjct: 83 LPKNEWTTQEEDVPYLRPLIDQIEAEAAEKDALDTL 118
>sp|Q6C3K7|QCR7_YARLI Cytochrome b-c1 complex subunit 7 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=QCR7 PE=3 SV=1
Length = 128
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 37 ISGALQKWAWEYSGFRKYGLYYDDLA-NETPVVEEALRRLPEKLKNERHFRQLRAVQLNI 95
I L K ++SG+R+ G +DL ETP ++ ALRRLP +R +R +RA Q ++
Sbjct: 23 IVVPLAKTYVKFSGYRQLGFKMNDLIIEETPNMQLALRRLPPTESYDRVYRLIRATQFSL 82
Query: 96 QKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
+ + TK E++ YL PYI VE E EK+ L
Sbjct: 83 SHKLATGNDITKPEEDDHYLIPYILDVEAEAFEKDALDNL 122
>sp|Q54M82|QCR7_DICDI Probable cytochrome b-c1 complex subunit 7 OS=Dictyostelium
discoideum GN=DDB_G0286171 PE=3 SV=1
Length = 109
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 39 GALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKS 98
+LQK +W +RK GLY+ DL N T +E RRLP + +R R A+ L+++K
Sbjct: 13 SSLQKSSW--VEYRKMGLYFADLYNNTEANQEVYRRLPFDVLVQRDRRLRVAIDLSLKKQ 70
Query: 99 ILPKDQWTKYEDE---TRYLKPYIEQVEKE 125
+LP+ +W+ + + T ++ Y EQVE+E
Sbjct: 71 LLPESEWSDNQKDFEFTEMIEKYTEQVERE 100
>sp|P46268|QCR7_CYBJA Cytochrome b-c1 complex subunit 7 OS=Cyberlindnera jadinii GN=QCR7
PE=3 SV=1
Length = 126
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 16 THTS-ADVHDFESSKTHLIFVYISGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALR 73
+HTS DF L +++ A K YSG+R+ GL +DDL +E P V++AL
Sbjct: 3 SHTSIVKAGDFILRTPVLRSIFVPAA--KLFCAYSGYRQLGLKFDDLIHEENPTVQKALS 60
Query: 74 RLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDET 112
RLP+ R+FR L A Q I +L D+ K ++T
Sbjct: 61 RLPKDEIYARNFRMLTAAQCGITHHLLSADKALKPSEDT 99
>sp|Q9SUU5|QCR71_ARATH Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana
GN=QCR7-1 PE=1 SV=1
Length = 122
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 51 FRKYGLYYDDLANE--TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKY 108
R+YGL YDDL ++ + ++EA+ RLP ++ + R+ R RA+ L+++ LPKD
Sbjct: 28 LRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDLQAVQ 87
Query: 109 EDETRYLKPYIEQVEKEFKEKEEWGKL 135
YL+ + VE+E KE+E G L
Sbjct: 88 TPFRGYLQDMLALVERESKEREALGAL 114
>sp|P48502|QCR7_SOLTU Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum PE=1 SV=1
Length = 123
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 49 SGFRKYGLYYDDLANETPV----VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQ 104
S R YGL +DDL + P+ V+EAL RLP ++ + R+ R LRA+ L+++ LP+D
Sbjct: 27 SRLRNYGLRHDDLYD--PMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKHQYLPEDL 84
Query: 105 WTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
YL+ + V++E E+E G L
Sbjct: 85 QAMQTPFRNYLQEMLALVKRESAEREALGAL 115
>sp|F4JWS8|QCR72_ARATH Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana
GN=QCR7-2 PE=1 SV=1
Length = 122
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 51 FRKYGLYYDDLANETPV----VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWT 106
R+YGL YDDL + P+ ++EAL RLP ++ + R+ R +RA+ L+++ LP +
Sbjct: 28 LRRYGLRYDDLYD--PLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLPDNLQA 85
Query: 107 KYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
YL+ + V++E E+E G L
Sbjct: 86 VQTPFRSYLQDMLALVKRERAEREALGAL 114
>sp|Q9K838|DPO3A_BACHD DNA polymerase III subunit alpha OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=dnaE PE=3 SV=1
Length = 1116
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 68 VEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFK 127
+E+ R PE L+N + V+L + K LPK Q + YL+ EQ KE +
Sbjct: 234 MEQTFRAYPEALQNTKKLADRCHVELTLGKPRLPKFQTPNEQSAEDYLRKLCEQGAKE-R 292
Query: 128 EKEEWGK 134
EEW K
Sbjct: 293 YGEEWTK 299
>sp|Q9Y753|FDFT_YARLI Squalene synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 445
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 60 DLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLK 116
D+ +E P ++E++ +K+ R +R+ +++ ++ P++ W KY +E R K
Sbjct: 202 DVLHENPRLQESMGLFLQKVNIIRDYRE----DIDVNRAFWPREIWHKYAEEMRDFK 254
>sp|E1BMP7|DNA2_BOVIN DNA replication ATP-dependent helicase/nuclease DNA2 OS=Bos taurus
GN=DNA2 PE=3 SV=3
Length = 1061
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 89 RAVQLNIQKSILPKDQWTKYEDETRYLKP 117
RAV+ ++ S +P W K ++ET++LKP
Sbjct: 407 RAVEQQMEDSSVPTSMWPKIKEETQHLKP 435
>sp|Q6FRZ9|ATM_CANGA Serine/threonine-protein kinase TEL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TEL1 PE=3 SV=1
Length = 2763
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 44 WAWEYSGFRKYGLYYDD--------LANETPVVEEALRRLPEKLKNERHFRQLRAVQLNI 95
++W S F+K+ YDD N + V+E L + +N++ +R L+ VQ +
Sbjct: 2669 YSWAVSPFKKHKYMYDDNLEGHMTTATNNSKVIERKLTPKLDSDENQQSYRALKGVQEKL 2728
Query: 96 QKSIL 100
++ L
Sbjct: 2729 DRNGL 2733
>sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic disease virus 1 GN=S3
PE=3 SV=1
Length = 899
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 51 FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKY 108
FR+ G YY ++ + P ++ ++ E + E + QLRA + I+ ++W ++
Sbjct: 719 FRQEGFYYTNMLDGPPAIDRVVQYTYEVARFEANMGQLRAA----LRRIMDDERWVRF 772
>sp|Q7RTR0|NALP9_HUMAN NACHT, LRR and PYD domains-containing protein 9 OS=Homo sapiens
GN=NLRP9 PE=2 SV=1
Length = 991
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 82 ERHF--RQLRAVQLNIQKSILPKDQWTKYEDETR-YLKPYIEQVEKEFK---EKE 130
++H+ +Q V LN+ I KD WTK ++E R L PY + +++ F+ EKE
Sbjct: 60 DKHYPGKQAWEVTLNLFLQINRKDLWTKAQEEMRNKLNPYRKHMKETFQLIWEKE 114
>sp|A0RX10|SYA_CENSY Alanine--tRNA ligase OS=Cenarchaeum symbiosum (strain A) GN=alaS
PE=3 SV=1
Length = 894
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 28 SKTHLIFVYISGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 75
+ TH++ G L W W++S F++ D+ + +P+ ++++
Sbjct: 588 TSTHILNASARGVLGSWVWQHSAFKEEDHARLDITHHSPLSAAEVKKI 635
>sp|P77743|PRPR_ECOLI Propionate catabolism operon regulatory protein OS=Escherichia
coli (strain K12) GN=prpR PE=1 SV=1
Length = 528
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 51 FRKYGLYYDDLANETPV---VEEALRRLPEKLKNER 83
FR L +D LAN TP+ E+A+ + +KL NER
Sbjct: 26 FRDISLEFDHLANITPIQLGFEKAVTYIRKKLANER 61
>sp|P57653|THIO_BUCAI Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=trxA PE=3 SV=1
Length = 108
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 96 QKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 135
KS D W ++ + + L P +E++ KE+ K GKL
Sbjct: 19 SKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKL 58
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,826,479
Number of Sequences: 539616
Number of extensions: 2111736
Number of successful extensions: 7411
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 7345
Number of HSP's gapped (non-prelim): 95
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)