BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18032
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2
Length = 881
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 134/155 (86%)
Query: 30 DKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTA 89
+KKKK GGFQS GL + V KG++K+GYK+PTPIQRKTIP++L+G+DVVAMARTGSGKTA
Sbjct: 89 NKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTA 148
Query: 90 CFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDN 149
CFL+PM E+LKTH+A +G RALILSPTRELALQT KF KELGKFT L++ +LGGD M++
Sbjct: 149 CFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMED 208
Query: 150 QFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
QFA LH +PDI++ATPGR +H+ VEM LKL S++Y
Sbjct: 209 QFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEY 243
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 255 TSRIALDLVGDSTEMIHKQRQSVRKWD---------PA-----KKKY---VQVTDDTIPL 297
TS D+ D+ EM+ Q + +K P KK Y + TIP+
Sbjct: 70 TSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPV 129
Query: 298 VLEGRDVVAMARTGSGKTACFLFYFFFRF 326
+L+G+DVVAMARTGSGKTACFL F R
Sbjct: 130 ILDGKDVVAMARTGSGKTACFLLPMFERL 158
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 251 FKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYV 288
F+Q + LDL+GD + + + RQ + KWD KK++V
Sbjct: 704 FEQQAAGAVLDLMGDEAQNLTRGRQQL-KWDRKKKRFV 740
>sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1
Length = 874
Score = 238 bits (606), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 132/155 (85%)
Query: 30 DKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTA 89
+KKKK GGFQS GL + V KG++K+GYK+PTPIQRKTIP++L+G+DVVAMARTGSGKTA
Sbjct: 88 NKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTA 147
Query: 90 CFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDN 149
CFL+PM E+LK +A +G RALILSPTRELALQT KF KELGKFT L++ +LGGD M++
Sbjct: 148 CFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMED 207
Query: 150 QFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
QFA LH +PDI++ATPGR +H+ VEM LKL S++Y
Sbjct: 208 QFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEY 242
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 255 TSRIALDLVGDSTEMIHKQRQSVRKWD---------PA-----KKKY---VQVTDDTIPL 297
TS D+ D+ EM+ Q + +K P KK Y + TIP+
Sbjct: 69 TSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPV 128
Query: 298 VLEGRDVVAMARTGSGKTACFLFYFFFRF 326
+L+G+DVVAMARTGSGKTACFL F R
Sbjct: 129 ILDGKDVVAMARTGSGKTACFLLPMFERL 157
>sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=DBP10 PE=3 SV=1
Length = 762
Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 128/165 (77%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
SSN G+ K K GGFQ+ GL +L+ + ++G+ +PTPIQRKTIPLVLE RDVV
Sbjct: 69 SSNRKTGSLQSKSAKKSGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVG 128
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+E+LK H+A G RA+I+SP+RELALQT K VKELGK T L++
Sbjct: 129 MARTGSGKTAAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTV 188
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF + A+PDI++ATPGRFLH+ VEM L LSS++Y
Sbjct: 189 LLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRY 233
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 24/33 (72%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
TIPLVLE RDVV MARTGSGKTA F+ R
Sbjct: 116 TIPLVLERRDVVGMARTGSGKTAAFVIPMIERL 148
>sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=dbp10 PE=3 SV=1
Length = 936
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 7 EDIEGFEDPTVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRK 66
ED E F T S+N + N + K GGGFQ+ GL +LK + ++G+ +PTPIQRK
Sbjct: 62 EDDEAFIAEKQT-SANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRK 120
Query: 67 TIPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKF 126
TIP+++E +DVV MARTGSGKTA F+IPM+EKLK+H+ G R LILSP+RELALQT K
Sbjct: 121 TIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKV 180
Query: 127 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 181 VKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIKY 238
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSSI
Sbjct: 177 TLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSI 236
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 237 KYVV--FDEADRLFEMGFAAQLTEILH 261
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP+++E +DVV MARTGSGKTA F+
Sbjct: 121 TIPVIMEDQDVVGMARTGSGKTAAFVI 147
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 128/165 (77%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP++++G+DVV
Sbjct: 72 SANRKASNLKGRTVKKGGGFQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVG 131
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H+ G R LILSP+RELALQT K VKELGK T L+S
Sbjct: 132 MARTGSGKTAAFVIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGKGTDLKSV 191
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 192 LLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRY 236
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELGK T L+S L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSSI
Sbjct: 175 TLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSSI 234
Query: 245 QLSLTD 250
+ + D
Sbjct: 235 RYVVFD 240
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP++++G+DVV MARTGSGKTA F+
Sbjct: 119 TIPVIMDGQDVVGMARTGSGKTAAFVI 145
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 129/165 (78%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
++N N + K GGGFQS GL +LK + ++G+ +PTPIQRKTIPLVL+ +DVV
Sbjct: 69 AANRKASNLRGRTVKKGGGFQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVG 128
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H+A G RALILSP+RELALQT K VKELG+ T L+S
Sbjct: 129 MARTGSGKTAAFVIPMIEKLKSHSAKFGSRALILSPSRELALQTLKVVKELGRGTDLKSV 188
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSSI+Y
Sbjct: 189 LLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSSIRY 233
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSSI
Sbjct: 172 TLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSSI 231
Query: 245 QLSLTD 250
+ + D
Sbjct: 232 RYVVFD 237
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPLVL+ +DVV MARTGSGKTA F+
Sbjct: 116 TIPLVLDDQDVVGMARTGSGKTAAFVI 142
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 254 DTSRIA-LDLVGD-STEMIHKQRQSVRKWDPAKKKYVQVTDD 293
++SRIA +DL GD ST + +S+ +WD +KKYV +D
Sbjct: 710 ESSRIATMDLAGDESTSRGFGEPRSIMRWDKRQKKYVSRRND 751
>sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp10 PE=3 SV=1
Length = 928
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 127/165 (76%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP++++ RDVV
Sbjct: 72 SANRKAANLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVG 131
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H++ G R LILSP+RELALQT K VKELGK T L+S
Sbjct: 132 MARTGSGKTAAFVIPMIEKLKSHSSKFGARGLILSPSRELALQTLKVVKELGKGTDLKSV 191
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 192 LLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRY 236
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSSI
Sbjct: 175 TLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSI 234
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 235 RYVV--FDEADRLFEMGFAAQLTEILH 259
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP++++ RDVV MARTGSGKTA F+
Sbjct: 119 TIPVIMDDRDVVGMARTGSGKTAAFVI 145
>sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10
PE=3 SV=1
Length = 934
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 127/165 (76%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP++++ +DVV
Sbjct: 73 SANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVG 132
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H+ G R LILSP+RELALQT K VKELG+ T L+S
Sbjct: 133 MARTGSGKTAAFVIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGRGTDLKSV 192
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QFA + +PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 193 LLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRY 237
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELG+ T L+S L+GGDS++ QFA + +PDIV+ATPGRFLH+ VEM L LSSI
Sbjct: 176 TLKVVKELGRGTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSSI 235
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 236 RYVV--FDEADRLFEMGFAAQLTEILH 260
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP++++ +DVV MARTGSGKTA F+
Sbjct: 120 TIPVIMDDQDVVGMARTGSGKTAAFVI 146
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 127/165 (76%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP+++E +DVV
Sbjct: 73 SANRKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVG 132
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM++KLK+H+ G R LILSP+RELALQT K VKELGK T L++
Sbjct: 133 MARTGSGKTAAFVIPMIQKLKSHSTQVGARGLILSPSRELALQTLKVVKELGKGTDLKAV 192
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 193 LLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRY 237
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELGK T L++ L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSSI
Sbjct: 176 TLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSSI 235
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 236 RYVV--FDEADRLFEMGFAAQLTEILH 260
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP+++E +DVV MARTGSGKTA F+
Sbjct: 120 TIPVIMEDQDVVGMARTGSGKTAAFVI 146
>sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=dbp10 PE=3 SV=1
Length = 869
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 127/165 (76%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP++++ +DVV
Sbjct: 53 SANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVG 112
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H+ G R L+LSP+RELALQT K VKELG+ T L+S
Sbjct: 113 MARTGSGKTAAFVIPMIEKLKSHSTKVGARGLVLSPSRELALQTLKVVKELGRGTDLKSV 172
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QFA + +PDI++ATPGRFLH+ VEM L LSSI+Y
Sbjct: 173 LLVGGDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLDLSSIRY 217
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELG+ T L+S L+GGDS++ QFA + +PDI++ATPGRFLH+ VEM L LSSI
Sbjct: 156 TLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLDLSSI 215
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 216 RYVV--FDEADRLFEMGFAAQLTEILH 240
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP++++ +DVV MARTGSGKTA F+
Sbjct: 100 TIPVIMDDQDVVGMARTGSGKTAAFVI 126
>sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-10 PE=3 SV=1
Length = 934
Score = 207 bits (528), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 129/169 (76%)
Query: 16 TVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGR 75
++T SS + N K K GGGFQ+ GL +L+ + ++G+ +PTPIQRK IPL+LE +
Sbjct: 78 SLTRSSQRKSSNIQGKSVKKGGGFQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERK 137
Query: 76 DVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTK 135
DVV MARTGSGKTA F+IPM+E+LK H+ G RALI+SP+RELALQT K VKELG+ T
Sbjct: 138 DVVGMARTGSGKTAAFVIPMIERLKGHSPRVGSRALIMSPSRELALQTLKVVKELGRGTD 197
Query: 136 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L++ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L L+SI+Y
Sbjct: 198 LKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASIKY 246
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELG+ T L++ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L L+SI
Sbjct: 185 TLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASI 244
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + + TE++H
Sbjct: 245 KYVV--FDEADRLFEMGFATELTEILH 269
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
IPL+LE +DVV MARTGSGKTA F+ R
Sbjct: 129 AIPLILERKDVVGMARTGSGKTAAFVIPMIERL 161
>sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain
RS) GN=DBP10 PE=3 SV=1
Length = 927
Score = 207 bits (527), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 124/165 (75%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIPLVL+ +DVV
Sbjct: 64 SMNRKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVG 123
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKLK+H+ G R LILSP+RELALQT K VKELG+ T L+
Sbjct: 124 MARTGSGKTAAFVIPMIEKLKSHSTKVGSRGLILSPSRELALQTLKVVKELGRGTDLKCV 183
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSSI+Y
Sbjct: 184 LLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSSIKY 228
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPLVL+ +DVV MARTGSGKTA F+
Sbjct: 111 TIPLVLDDQDVVGMARTGSGKTAAFVI 137
>sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=dbp10 PE=3 SV=2
Length = 920
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 120/151 (79%)
Query: 34 KMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLI 93
K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIPLVL+ +DVV MARTGSGKTA F+I
Sbjct: 85 KKGGGFQAMGLNSHLLKAISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAAFVI 144
Query: 94 PMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFAR 153
PM+EKL+ H+ G RALI+SP+RELALQT K VKE G+ T L+ L+GGDS++ QF
Sbjct: 145 PMIEKLRAHSVRVGARALIMSPSRELALQTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGF 204
Query: 154 LHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
+ A+PDIV+ATPGRFLH+ VEM L LSS++Y
Sbjct: 205 MAANPDIVIATPGRFLHLKVEMSLDLSSMKY 235
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPLVL+ +DVV MARTGSGKTA F+
Sbjct: 118 TIPLVLDNQDVVGMARTGSGKTAAFVI 144
>sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp10 PE=3 SV=1
Length = 935
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 124/165 (75%)
Query: 20 SSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVA 79
S+N N + K GGGFQ+ GL +LK + ++G+ +PTPIQRKTIP++++ +DVV
Sbjct: 72 SANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVG 131
Query: 80 MARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQST 139
MARTGSGKTA F+IPM+EKL++H+ G R LILSP+RELALQT K VKELGK T L+
Sbjct: 132 MARTGSGKTAAFVIPMIEKLRSHSTKVGARGLILSPSRELALQTLKVVKELGKGTDLKCV 191
Query: 140 CLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L L SI+Y
Sbjct: 192 LLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYSIRY 236
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKELGK T L+ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L L SI
Sbjct: 175 TLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYSI 234
Query: 245 QLSLTDFKQDTSRIALDLVGDSTEMIH 271
+ + F + + TE++H
Sbjct: 235 RYVV--FDEADRLFEMGFAAQLTEILH 259
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIP++++ +DVV MARTGSGKTA F+
Sbjct: 119 TIPVIMDDQDVVGMARTGSGKTAAFVI 145
>sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=DBP10 PE=3 SV=2
Length = 931
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 122/159 (76%)
Query: 26 GNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGS 85
N KK G FQSFGL VL + K+GY+ PTPIQRKTIPL++ RDVV MARTGS
Sbjct: 88 ANNPQAKKAKAGSFQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRDVVGMARTGS 147
Query: 86 GKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGD 145
GKTA F +P++EKLK H+A G+RA+ILSP+RELALQT+K VKE K + L++ L GGD
Sbjct: 148 GKTAAFTLPVIEKLKGHSARVGIRAIILSPSRELALQTYKQVKEFSKGSDLRAIVLTGGD 207
Query: 146 SMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
S+++QF+ + ++PDIV+ATPGRFLH+ VEM+L L +++Y
Sbjct: 208 SLEDQFSSMVSNPDIVIATPGRFLHLQVEMQLDLKTVEY 246
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 283 AKKKYVQVT---DDTIPLVLEGRDVVAMARTGSGKTACF 318
AKK Y Q T TIPL++ RDVV MARTGSGKTA F
Sbjct: 115 AKKGYRQPTPIQRKTIPLIMANRDVVGMARTGSGKTAAF 153
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP10 PE=3 SV=2
Length = 914
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 131/182 (71%), Gaps = 12/182 (6%)
Query: 15 PTVTISSNDDN------------GNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTP 62
P++ +S ++D+ N K G F SFGL +LK + K+G+K PTP
Sbjct: 65 PSLELSDDEDDESRPSEVAEYFSNNKLQATKAKAGSFASFGLSKFLLKNIAKKGFKQPTP 124
Query: 63 IQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQ 122
IQRKTIPLV+E RDVV MARTGSGKTA F++P++EKLK+H+ GVRA+ILSP+RELALQ
Sbjct: 125 IQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVEKLKSHSPKVGVRAVILSPSRELALQ 184
Query: 123 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 182
TFK VKE K T L+S L+GGDS+++QF+ + +PDI+VATPGRFLH+ VEM L L ++
Sbjct: 185 TFKQVKEFTKGTDLRSIVLIGGDSLEDQFSSMMTNPDILVATPGRFLHLKVEMNLDLKTV 244
Query: 183 QY 184
+Y
Sbjct: 245 EY 246
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 283 AKKKYVQVTD---DTIPLVLEGRDVVAMARTGSGKTACFLF 320
AKK + Q T TIPLV+E RDVV MARTGSGKTA F+
Sbjct: 115 AKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVL 155
>sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP10 PE=3 SV=2
Length = 932
Score = 201 bits (510), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 120/159 (75%)
Query: 26 GNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGS 85
N KK G F SFG +L + K+G+K PTPIQRKTIPL++E RDVV MARTGS
Sbjct: 86 ANNPQAKKAKNGSFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGS 145
Query: 86 GKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGD 145
GKTA F +P++EKLK+H+ GVRA+ILSP+RELA QTFK VKE K T L+S L+GGD
Sbjct: 146 GKTAAFTLPLVEKLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGD 205
Query: 146 SMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
S++ QF+ + +PD++VATPGRFLH+ VEMEL+L +++Y
Sbjct: 206 SLEEQFSSMMTNPDVIVATPGRFLHLKVEMELELKTVEY 244
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
TFK VKE K T L+S L+GGDS++ QF+ + +PD++VATPGRFLH+ VEMEL+L ++
Sbjct: 183 TFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSMMTNPDVIVATPGRFLHLKVEMELELKTV 242
Query: 245 QLSLTD 250
+ + D
Sbjct: 243 EYIVFD 248
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACF 318
TIPL++E RDVV MARTGSGKTA F
Sbjct: 127 TIPLIMENRDVVGMARTGSGKTAAF 151
>sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP10 PE=3
SV=1
Length = 897
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 119/151 (78%)
Query: 34 KMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLI 93
K GGGFQ+ GL +LK + ++G+ +PTPIQRK IPL+L+ +D+V MARTGSGKTA F+I
Sbjct: 79 KKGGGFQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVI 138
Query: 94 PMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFAR 153
PM+EKL+ H+A G RALI+SP+RELA+QT K VKE + T L+ L+GGDS++ QF
Sbjct: 139 PMIEKLRAHSARFGTRALIMSPSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGY 198
Query: 154 LHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
+ A+PDIV+ATPGRFLH+ VEM L LSSI+Y
Sbjct: 199 MAANPDIVIATPGRFLHLKVEMSLDLSSIKY 229
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
IPL+L+ +D+V MARTGSGKTA F+
Sbjct: 112 AIPLILDRKDLVGMARTGSGKTAAFVI 138
>sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP10 PE=3 SV=1
Length = 878
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 117/146 (80%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
FQ+ GL +LK + ++G+KIPTPIQRK +PL+L+G DVV MARTGSGKTA F+IPM+E+
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 99 LKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP 158
LKTH+A G R +I+SP+RELALQT K VKE G+ T L++ L+GGDS++ QF + +P
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNP 199
Query: 159 DIVVATPGRFLHIVVEMELKLSSIQY 184
DI++ATPGRFLH+ VEM L LSS+QY
Sbjct: 200 DIIIATPGRFLHLKVEMGLDLSSVQY 225
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
+PL+L+G DVV MARTGSGKTA F+ R
Sbjct: 108 AVPLILQGDDVVGMARTGSGKTAAFVIPMIERL 140
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 13/177 (7%)
Query: 21 SNDDNGN-------------TGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKT 67
S++D+GN G K FQS GL +L+ + K+G+K PTPIQRKT
Sbjct: 40 SDEDDGNYIASKLLESNRRTKGKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKT 99
Query: 68 IPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFV 127
IPL+LEGRDVV MARTGSGKTA F+IPM+E LK+ A S RALILSP RELALQT K V
Sbjct: 100 IPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVV 159
Query: 128 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
K+ K T L+S ++GG S++ QF+ L PDIVVATPGRFLH+ VEM+L+LSSI+Y
Sbjct: 160 KDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEY 216
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 24/27 (88%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPL+LEGRDVV MARTGSGKTA F+
Sbjct: 99 TIPLLLEGRDVVGMARTGSGKTAAFVI 125
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 260 LDLVGDSTEMIHKQRQSVRKWDPAKKKYVQVTDD 293
LDL D E I + R+ ++WDP KKK+V + +D
Sbjct: 698 LDLTND--EGIEQSRKGGQRWDPKKKKFVNIIND 729
>sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
indica GN=OsI_028228 PE=2 SV=2
Length = 851
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 26 GNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGS 85
G KKK GGF+S GL EV +GV +GY++PTPIQRK +PL+L G D+ AMARTGS
Sbjct: 38 GEGASKKKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGS 97
Query: 86 GKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGD 145
GKTA FL+PM+++L+ H A +G+RALILSPTR+LA QT KF ++LGKFT L+ + ++GGD
Sbjct: 98 GKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGD 157
Query: 146 SMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLSSIQY 184
SM++QF L +PDI++ATPGR +H + E+E L L +++Y
Sbjct: 158 SMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEY 197
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLSS 243
T KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATPGR +H + E+E L L +
Sbjct: 135 TLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRT 194
Query: 244 IQLSLTDFKQDTSRIALDLVGDSTEMIHK 272
++ + F + S +L L+ +++HK
Sbjct: 195 VEYVV--FDEADSLFSLGLIQQLHDILHK 221
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRFDR 328
+PL+L G D+ AMARTGSGKTA FL R R
Sbjct: 79 AMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRR 113
>sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DBP10 PE=3 SV=1
Length = 926
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 118/152 (77%)
Query: 33 KKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFL 92
KK G F GL VLK + ++G+K PTPIQRKTIPLVLEG+DVV MARTGSGKTA F+
Sbjct: 98 KKSSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFV 157
Query: 93 IPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFA 152
+PMLEKLK H+A G RA+ILSP+RELALQT K VK+ T L+ L+GGDS++ QF
Sbjct: 158 LPMLEKLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFK 217
Query: 153 RLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
+ ++PDI++ATPGRFLH+ VEMEL L+S++Y
Sbjct: 218 MMMSNPDIIIATPGRFLHLKVEMELSLASVEY 249
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 285 KKYVQVTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
K+ + TIPLVLEG+DVV MARTGSGKTA F+
Sbjct: 123 KQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVL 158
>sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
japonica GN=Os08g0416100 PE=2 SV=2
Length = 851
Score = 198 bits (503), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 26 GNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGS 85
G K+K GGF+S GL EV +GV +GY++PTPIQRK +PL+L G D+ AMARTGS
Sbjct: 38 GEGASKRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGS 97
Query: 86 GKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGD 145
GKTA FL+PM+++L+ H A +G+RALILSPTR+LA QT KF ++LGKFT L+ + ++GGD
Sbjct: 98 GKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGD 157
Query: 146 SMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLSSIQY 184
SM++QF L +PDI++ATPGR +H + E+E L L +++Y
Sbjct: 158 SMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEY 197
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLSS 243
T KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATPGR +H + E+E L L +
Sbjct: 135 TLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRT 194
Query: 244 IQLSLTDFKQDTSRIALDLVGDSTEMIHK 272
++ + F + S +L L+ +++HK
Sbjct: 195 VEYVV--FDEADSLFSLGLIQQLHDILHK 221
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRFDR 328
+PL+L G D+ AMARTGSGKTA FL R R
Sbjct: 79 AMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRR 113
>sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP10 PE=3 SV=1
Length = 969
Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 118/159 (74%)
Query: 27 NTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSG 86
NT K K G F SFGL +L + KRG++ PTPIQRKTIPL+L+ RD+V MARTGSG
Sbjct: 105 NTDAKSKHKKGSFASFGLSKLILVNISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSG 164
Query: 87 KTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDS 146
KTA F++PM+EKLKTH++ G RA+ILSP+RELA+QT KE + T L+S L GGDS
Sbjct: 165 KTAAFVLPMIEKLKTHSSKIGARAIILSPSRELAMQTHSVFKEFSRGTHLRSVLLTGGDS 224
Query: 147 MDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYT 185
+++QF + +PD+++ATPGRFLH+ VEM L L S++Y
Sbjct: 225 LEDQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYA 263
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 145 TIPLILQNRDIVGMARTGSGKTAAFVL 171
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 227 PGRFL-HIVVEMELKLSSIQLSLTDFKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKK 285
P FL H E++ ++LS F + ++ A DL D +HKQ +V KWD +K
Sbjct: 759 PNFFLSHYAPANEIQDKQLELS-GGFINEAAQSAYDLNSDDKVQVHKQTATV-KWDKKRK 816
Query: 286 KYVQVT--DDTIPLVLE-GRDVVAMARTG 311
KYV + D+ ++ E G+ + A R+G
Sbjct: 817 KYVNMNGIDNKKYIIGESGQKIAASFRSG 845
>sp|A4R5B8|DBP10_MAGO7 ATP-dependent RNA helicase DBP10 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP10 PE=3 SV=1
Length = 914
Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 118/146 (80%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
FQ+ GL +L+ + ++G+ +PTPIQRK+IPL+L+ RDVV MARTGSGKTA F+IPM+E+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 99 LKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP 158
L+ H+A G RALI+SP+RELALQT K VKE GK T L++ L+GGDS+++QF + +P
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNP 211
Query: 159 DIVVATPGRFLHIVVEMELKLSSIQY 184
DI++ATPGRFLH+ VEM L LSSI+Y
Sbjct: 212 DIIIATPGRFLHLKVEMSLDLSSIKY 237
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 185 TFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSI 244
T K VKE GK T L++ L+GGDS+++QF + +PDI++ATPGRFLH+ VEM L LSSI
Sbjct: 176 TLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSSI 235
Query: 245 QLSLTD 250
+ + D
Sbjct: 236 KYVVFD 241
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
+IPL+L+ RDVV MARTGSGKTA F+ R
Sbjct: 120 SIPLILDRRDVVGMARTGSGKTAAFVIPMIERL 152
>sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1
Length = 977
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 130/188 (69%), Gaps = 18/188 (9%)
Query: 15 PTVTISSNDDNGNTG------------------DKKKKMGGGFQSFGLGFEVLKGVLKRG 56
P++ IS ++D+ N G +K K G F SFG +L V K+G
Sbjct: 81 PSLEISDDEDSNNKGDHEDDDDDLNDYFSINNSEKSKHKKGSFPSFGFSKLILSNVHKKG 140
Query: 57 YKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPT 116
++ PTPIQRKTIPL+L+ RD+V MARTGSGKTA F++PM+EKLK+H++ G RA+ILSP+
Sbjct: 141 FRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGARAVILSPS 200
Query: 117 RELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME 176
RELALQT + KE K T L+S L GGDS+++QF+ + ++PD++VATPGRFLH+ VEM
Sbjct: 201 RELALQTHRVFKEFSKGTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATPGRFLHLKVEMS 260
Query: 177 LKLSSIQY 184
L L +++Y
Sbjct: 261 LDLKTVEY 268
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 151 TIPLILQKRDIVGMARTGSGKTAAFVL 177
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 245 QLSLTD-FKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYVQV 290
QL +T F D ++ A DL D +HKQ +V KWD +KKYV +
Sbjct: 787 QLQITSGFTNDAAQAAYDLNDDDKVQVHKQTATV-KWDKKRKKYVNM 832
>sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis
thaliana GN=RH29 PE=3 SV=1
Length = 845
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
F+S LG V + K+GYK+PTPIQRKT+PL+L G DVVAMARTGSGKTA FLIPMLEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 99 LKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP 158
LK H GVRALILSPTR+LA QT KF KELGKFT L+ + L+GGDSM++QF L P
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 159 DIVVATPGRFLHIVVEM-ELKLSSIQY 184
D+++ATPGR +H++ E+ ++ L +++Y
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEY 176
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLF 320
T+PL+L G DVVAMARTGSGKTA FL
Sbjct: 58 TMPLILSGVDVVAMARTGSGKTAAFLI 84
>sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP10 PE=3 SV=1
Length = 973
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 125/177 (70%), Gaps = 5/177 (2%)
Query: 13 EDPTVTISSNDD-----NGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKT 67
++ T S+DD N K G F SFGL VL + K+G++ PTPIQRKT
Sbjct: 97 DEKKATNESDDDLNDYFNTTADAAAKHKKGSFASFGLSKLVLINISKKGFRQPTPIQRKT 156
Query: 68 IPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFV 127
IPL+L+ RD+V MARTGSGKTA F++PM+EKLKTH+A GVRA+ILSP+RELA+QT +
Sbjct: 157 IPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKTHSAKIGVRAVILSPSRELAIQTHRVF 216
Query: 128 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
KE K + L+S L GGDS+++QF + +PD+V+ATPGRFLH+ VEM L L S++Y
Sbjct: 217 KEFSKGSDLRSILLTGGDSLEDQFGMMMGNPDVVIATPGRFLHLKVEMNLDLKSVEY 273
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Query: 269 MIHKQRQSVRKWDPAKKKYVQVTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
+I+ ++ R+ P ++K TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 138 LINISKKGFRQPTPIQRK-------TIPLILQKRDIVGMARTGSGKTAAFVL 182
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 232 HIVVEMELKLSSIQLSLTDFKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYV--Q 289
H +++ +Q+S + F D S A DL D +HKQ +V KWD +KKYV Q
Sbjct: 774 HFAPTSDIQDKQLQIS-SGFTNDASNAAFDLANDDKVQVHKQTATV-KWDKKRKKYVNTQ 831
Query: 290 VTDDTIPLVLE-GRDVVAMARTG 311
D+ ++ E G+ + A R+G
Sbjct: 832 GLDNKKYIIGESGQKIPASFRSG 854
>sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP10 PE=3 SV=1
Length = 908
Score = 194 bits (493), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 125/186 (67%), Gaps = 17/186 (9%)
Query: 15 PTVTISSNDDNG----------------NTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYK 58
P++ +S N+ N N KK G F SFGL +L + K+GYK
Sbjct: 61 PSLELSDNEGNNDDDDDDDSKINSYFINNNPTAKKAKAGSFASFGLTKFILANIAKKGYK 120
Query: 59 IPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRE 118
PTPIQRKTIPL++EGRDVV MARTGSGKTA F++P++E+LK+ GVRA+ILSP+RE
Sbjct: 121 QPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERLKSRQP-GGVRAVILSPSRE 179
Query: 119 LALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 178
LALQT+K VKE T LQS L+GGDS++ F+++ PDI+V TPGRFLH+ VEM+
Sbjct: 180 LALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYD 239
Query: 179 LSSIQY 184
L ++QY
Sbjct: 240 LMTVQY 245
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 283 AKKKYVQVTD---DTIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
AKK Y Q T TIPL++EGRDVV MARTGSGKTA F+ R
Sbjct: 115 AKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERL 161
>sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DBP10 PE=3 SV=1
Length = 995
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 118/158 (74%)
Query: 27 NTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSG 86
N +K K G F SFGL VL + ++G++ PTPIQRKTIPL+L+ RD+V MARTGSG
Sbjct: 127 NNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSG 186
Query: 87 KTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDS 146
KTA F++PM+EKLK+H+ G RA+ILSP+RELA+QTF K+ + T+L+S L GGDS
Sbjct: 187 KTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDS 246
Query: 147 MDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
++ QF + +PD+++ATPGRFLH+ VEM L L S++Y
Sbjct: 247 LEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEY 284
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 273 QRQSVRKWDPAKKKYVQVTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
+R+ R+ P ++K TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 153 KRKGFRQPTPIQRK-------TIPLILQSRDIVGMARTGSGKTAAFIL 193
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 245 QLSLTD-FKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYV--QVTDDTIPLVLE- 300
QL +T+ F D ++ A DL D +HKQ +V KWD +KKYV Q D+ ++ E
Sbjct: 803 QLQITNGFANDAAQAAYDLNSDDKVQVHKQTATV-KWDKKRKKYVNTQGIDNKKYIIGES 861
Query: 301 GRDVVAMARTG 311
G+ + A R+G
Sbjct: 862 GQKIAASFRSG 872
>sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DBP10 PE=1 SV=2
Length = 995
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 118/158 (74%)
Query: 27 NTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSG 86
N +K K G F SFGL VL + ++G++ PTPIQRKTIPL+L+ RD+V MARTGSG
Sbjct: 127 NNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSG 186
Query: 87 KTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDS 146
KTA F++PM+EKLK+H+ G RA+ILSP+RELA+QTF K+ + T+L+S L GGDS
Sbjct: 187 KTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDS 246
Query: 147 MDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
++ QF + +PD+++ATPGRFLH+ VEM L L S++Y
Sbjct: 247 LEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEY 284
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 273 QRQSVRKWDPAKKKYVQVTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
+R+ R+ P ++K TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 153 KRKGFRQPTPIQRK-------TIPLILQSRDIVGMARTGSGKTAAFIL 193
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 245 QLSLTD-FKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYV--QVTDDTIPLVLE- 300
QL +T+ F D ++ A DL D +HKQ +V KWD +KKYV Q D+ ++ E
Sbjct: 803 QLQITNGFANDAAQAAYDLNSDDKVQVHKQTATV-KWDKKRKKYVNTQGIDNKKYIIGES 861
Query: 301 GRDVVAMARTG 311
G+ + A R+G
Sbjct: 862 GQKIAASFRSG 872
>sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum
GN=helA PE=3 SV=1
Length = 1091
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 117/148 (79%)
Query: 37 GGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPML 96
GGFQS L +LK +LK+G+ +PTPIQRK+IP++L+G D+V MARTGSGKT F+IPM+
Sbjct: 230 GGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMI 289
Query: 97 EKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHA 156
+KL H+ T GVRA+ILSPTRELA+QTFK VK+ + T+L++ ++GGDSM++QF L
Sbjct: 290 QKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLAR 349
Query: 157 SPDIVVATPGRFLHIVVEMELKLSSIQY 184
+PDI++ATPGR +H ++E + LS +QY
Sbjct: 350 NPDIIIATPGRLMHHLLETGMSLSKVQY 377
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFL 319
+IP++L+G D+V MARTGSGKT F+
Sbjct: 260 SIPMILDGHDIVGMARTGSGKTGAFV 285
>sp|Q757U8|DBP10_ASHGO ATP-dependent RNA helicase DBP10 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP10
PE=3 SV=1
Length = 960
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 127/185 (68%), Gaps = 16/185 (8%)
Query: 15 PTVTISSNDDNGNTGDK---------------KKKMGGGFQSFGLGFEVLKGVLKRGYKI 59
P++ +S +D N GDK K G F SFGL +L + ++G++
Sbjct: 84 PSLELSDGEDADN-GDKDDVDSYFNTTSQLAASKAKKGSFASFGLSKFILGNISRKGFRQ 142
Query: 60 PTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTREL 119
PTPIQRKTIPL+L+ RD+V MARTGSGKTA F++P++EKLK H+A G RA+ILSP+REL
Sbjct: 143 PTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMHSAKIGARAMILSPSREL 202
Query: 120 ALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKL 179
A+QT K KE K + L+S L GGD +++QF+ + ++PD+++ATPGRFLH+ VEM L L
Sbjct: 203 AMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRFLHLKVEMNLDL 262
Query: 180 SSIQY 184
SI+Y
Sbjct: 263 HSIEY 267
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 7/47 (14%)
Query: 274 RQSVRKWDPAKKKYVQVTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
R+ R+ P ++K TIPL+L+ RD+V MARTGSGKTA F+
Sbjct: 137 RKGFRQPTPIQRK-------TIPLILQQRDIVGMARTGSGKTAAFVL 176
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 232 HIVVEMELKLSSIQLSLTDFKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYVQVT 291
H +++ +Q++ + F + S+ DL D +HKQ +V KWD +KKYV V
Sbjct: 763 HFAPASDIQDKQLQVA-SSFTNEVSKATFDLHNDDKVQVHKQTATV-KWDKKRKKYVNVQ 820
Query: 292 --DDTIPLVLE-GRDVVAMARTG 311
D+ ++ E G+ + A R+G
Sbjct: 821 GIDNKKYIIGESGQKIPASFRSG 843
>sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP10 PE=3 SV=1
Length = 948
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Query: 32 KKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACF 91
KK G F SFG +L + K+GYK PTPIQR++IPL+++ RDVV MARTGSGKTA F
Sbjct: 116 KKAKAGSFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAF 175
Query: 92 LIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQF 151
++P++EKLK + SGVRA+ILSP+RELALQT+K VKE T LQS L+GGDS++ F
Sbjct: 176 VLPLIEKLKLRSP-SGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDF 234
Query: 152 ARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
++ PDI+V TPGRFLH+ VEM+ L S+QY
Sbjct: 235 GKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQY 267
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 283 AKKKYVQVTD---DTIPLVLEGRDVVAMARTGSGKTACFLF 320
AKK Y Q T +IPL+++ RDVV MARTGSGKTA F+
Sbjct: 137 AKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVL 177
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 245 QLSL-TDFKQDTSRIALDLVGDSTEMIHKQRQSVRKWDPAKKKYVQ--VTDDTIPLVLEG 301
QLS+ + F D DL D+ + + K +Q V KWD K KY+ TD + G
Sbjct: 778 QLSIASSFANDAQAATFDL--DNDDKLQKNKQQVMKWDKKKGKYINSMSTDKKYIISENG 835
Query: 302 RDVVAMARTG 311
+ A R+G
Sbjct: 836 TKIPATFRSG 845
>sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP10 PE=3 SV=1
Length = 1154
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 16/162 (9%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEG--RDVVAMARTGSGKTACFLIPML 96
FQS GL +L+ +L RG+ PTPIQR+ IP ++ RDVV MARTGSGKT +LIP++
Sbjct: 146 FQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPLI 205
Query: 97 EKLK-THAATSGVRALILSPTRELALQTFKFVKELGKFTK-------------LQSTCLL 142
+L H+ T G+++LIL P+RELA+Q + KE+ + K ++ ++
Sbjct: 206 NRLNGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIRWAIIV 265
Query: 143 GGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 184
GG+S+D QF + +PD+V+ATPGR LH+ VEM L L S++Y
Sbjct: 266 GGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEY 307
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 247 SLTD-FKQDTSRIALDLVGDSTEM-IHKQRQSVRKWDPAKKKYVQVTDDTIPLVLEGRDV 304
S TD F Q S ++ DL GD + QR +V +WD KK ++Q T G D
Sbjct: 960 SHTDSFIQQASAVSFDLAGDDATLGTQSQRPNVTRWDSKKKNFIQAT--------VGADN 1011
Query: 305 VAMARTGSG 313
M RT SG
Sbjct: 1012 KKMIRTESG 1020
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 294 TIPLVLEG--RDVVAMARTGSGKTACFLFYFFFRFD 327
IP ++ RDVV MARTGSGKT +L R +
Sbjct: 174 AIPAIMSQPPRDVVGMARTGSGKTLAYLIPLINRLN 209
>sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP10 PE=3 SV=1
Length = 802
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 26/194 (13%)
Query: 15 PTVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLE- 73
P+ + + D G +K GG +++ +G ++++ +L R +K PTPIQR IP L
Sbjct: 6 PSWALETTAD-GEVKEKTSGPGGQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALST 64
Query: 74 -GRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGK 132
RD++ MARTGSGKT +LIP+L++ + G RALIL P+RELA+Q + K+L +
Sbjct: 65 PPRDILGMARTGSGKTLAYLIPLLQRTGSTHHGQGPRALILCPSRELAVQIYTVGKDLAR 124
Query: 133 -----------------------FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 169
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFL
Sbjct: 125 GMNKGKGKGKNKNEDEEDEEGKGKEGLRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFL 184
Query: 170 HIVVEMELKLSSIQ 183
H++VEM + L +Q
Sbjct: 185 HLIVEMHMDLRHLQ 198
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 198 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQLSLTD 250
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q + D
Sbjct: 151 LRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYD 203
>sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP10 PE=3
SV=1
Length = 802
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 26/194 (13%)
Query: 15 PTVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLE- 73
P+ + + D G +K GG +++ +G ++++ +L R +K PTPIQR IP L
Sbjct: 6 PSWALETTAD-GEVKEKTSGPGGQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALST 64
Query: 74 -GRDVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGK 132
RD++ MARTGSGKT +LIP+L++ + G RALIL P+RELA+Q + K+L +
Sbjct: 65 PPRDILGMARTGSGKTLAYLIPLLQRTGSTHHGQGPRALILCPSRELAVQIYTVGKDLAR 124
Query: 133 -----------------------FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 169
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFL
Sbjct: 125 GMNKGKGKGKNKNEDEEDEEGKGKEGLRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFL 184
Query: 170 HIVVEMELKLSSIQ 183
H++VEM + L +Q
Sbjct: 185 HLIVEMHMDLRHLQ 198
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 198 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQLSLTD 250
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q + D
Sbjct: 151 LRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYD 203
>sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12)
GN=rhlE PE=1 SV=3
Length = 454
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 100/149 (67%), Gaps = 4/149 (2%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
F S GL ++L+ V ++GY+ PTPIQ++ IP VLEGRD++A A+TG+GKTA F +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 99 LKT---HA-ATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARL 154
L T HA VRALIL+PTRELA Q + V++ K+ ++S + GG S++ Q +L
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 155 HASPDIVVATPGRFLHIVVEMELKLSSIQ 183
D++VATPGR L + + +KL ++
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVE 151
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFLFYFF 323
+ IP VLEGRD++A A+TG+GKTA F
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
>sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DHH1 PE=3 SV=1
Length = 547
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 16 TVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGR 75
+ I + D T D K G F+ FGL E+L G+ + G++ P+PIQ ++IP+ L GR
Sbjct: 8 NLNIPAKDSRPQTEDVTKTQGKSFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGR 67
Query: 76 DVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTK 135
D++A A+ G+GKTA F+IP L+++KT + ++ LIL PTRELALQT + VK LGK K
Sbjct: 68 DILARAKNGTGKTASFIIPALQQVKT--KLNKIQVLILVPTRELALQTSQVVKTLGKHLK 125
Query: 136 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVV 173
LQ GG + + RL I+V TPGR L +
Sbjct: 126 LQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAA 163
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFL 319
+ +++IP+ L GRD++A A+ G+GKTA F+
Sbjct: 55 IQEESIPMALAGRDILARAKNGTGKTASFI 84
>sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium
discoideum GN=ddx6 PE=3 SV=1
Length = 423
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 23 DDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMAR 82
D+ T D G F L ++L+G+ ++GY P+PIQ K IP+ L GRD++A A+
Sbjct: 35 DERRQTEDVTATEGNDFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAK 94
Query: 83 TGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLL 142
G+GKTA FLIP LE KT ++ LIL PTRELALQT + KELGK+ +Q
Sbjct: 95 NGTGKTASFLIPALE--KTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMAST 152
Query: 143 GGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 181
GG S+ + RL+ I+VATPGR L + + LS+
Sbjct: 153 GGTSLKDDIMRLYNPVHILVATPGRVLDLAQKNVANLSN 191
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 264 GDSTEMIHKQRQSVRKWDPAKKKYVQ---VTDDTIPLVLEGRDVVAMARTGSGKTACFLF 320
G+ + +H +R +R +K YV+ + + IP+ L GRD++A A+ G+GKTA FL
Sbjct: 48 GNDFDDLHLKRDLLRGI--FEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLI 105
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 29 GDKKKKM----GGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTG 84
GDK+K M FQS L +LKG+ G+++PT IQ KTIPL L G+D+V A TG
Sbjct: 247 GDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTG 306
Query: 85 SGKTACFLIPMLEKLKTHA-ATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLG 143
SGKTA F++P+LE+L R LIL PTRELA+Q ++ FT + +G
Sbjct: 307 SGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIG 366
Query: 144 GDSMDNQFARLHASPDIVVATPGRFL 169
G S+ Q L PDIV+ATPGRF+
Sbjct: 367 GLSLKLQEQELRKRPDIVIATPGRFI 392
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 289 QVTDDTIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
Q+ D TIPL L G+D+V A TGSGKTA F+ R
Sbjct: 284 QIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERL 321
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
F+ L +LK V K G+ PTPIQ K IPL L G+D++A A TGSGKTA FL+P+LE+
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 99 LK-THAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHAS 157
L + +R LIL PTRELALQ ++ L +F+ + S ++GG S Q L S
Sbjct: 252 LLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKS 311
Query: 158 PDIVVATPGRFL 169
PD+V+ATPGR +
Sbjct: 312 PDVVIATPGRLI 323
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 295 IPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
IPL L G+D++A A TGSGKTA FL R
Sbjct: 221 IPLALNGKDILASASTGSGKTAAFLLPVLERL 252
>sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DHH1 PE=3 SV=1
Length = 549
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 16 TVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGR 75
+ + D T D G F+ F L E+L G+ + G++ P+PIQ ++IP+ L GR
Sbjct: 9 NLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGR 68
Query: 76 DVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTK 135
D++A A+ G+GKTA F+IP L+ +K + V+ALIL PTRELALQT + V+ LGK
Sbjct: 69 DILARAKNGTGKTASFIIPCLQLVK--PKLNKVQALILVPTRELALQTSQVVRTLGKHVG 126
Query: 136 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 181
Q GG S+ + RLH I+V TPGR L + + LS
Sbjct: 127 TQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSE 172
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFL 319
+ +++IP+ L GRD++A A+ G+GKTA F+
Sbjct: 56 IQEESIPMALAGRDILARAKNGTGKTASFI 85
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIPMLEK 98
FQ L +LK + + G+ +PTP+Q TIP+ L G+D+VA A+TGSGKTA +LIP++E+
Sbjct: 198 FQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIER 257
Query: 99 LKTHAATSGVRALILSPTRELALQTFKFVKELGKF-TKLQSTCLLGGDSMDNQFARLHAS 157
L ++ +A+IL+PTRELA+Q ++LG+F + L +GG S+ Q +L
Sbjct: 258 LLYVKNSTSTKAIILTPTRELAIQVHDVGRKLGQFVSNLNFGMAVGGLSLKQQEQQLKTR 317
Query: 158 PDIVVATPGRFL-HI 171
PDIV+ATPGR + HI
Sbjct: 318 PDIVIATPGRLIDHI 332
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFLFYFFFRF 326
V TIP+ L G+D+VA A+TGSGKTA +L R
Sbjct: 222 VQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIERL 258
>sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana
GN=RH12 PE=2 SV=1
Length = 498
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 16 TVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGR 75
T+ + D T D G F+ + L ++LKG+ ++G++ P+PIQ ++IP+ L G
Sbjct: 103 TLRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGS 162
Query: 76 DVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTK 135
D++A A+ G+GKT F IP+LEK+ + + ++A+IL PTRELALQT + KEL K+
Sbjct: 163 DILARAKNGTGKTGAFCIPVLEKIDPN--NNVIQAMILVPTRELALQTSQVCKELSKYLN 220
Query: 136 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHI 171
+Q GG S+ + RLH ++V TPGR L +
Sbjct: 221 IQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDL 256
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFLFYFFFRFDRGN 330
+ +++IP+ L G D++A A+ G+GKT F + D N
Sbjct: 150 IQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNN 190
>sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1
Length = 484
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 17 VTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRD 76
+ I D T D G F+ F L E+L G+ + G++ P+PIQ ++IP+ L GRD
Sbjct: 14 LNIPKKDTRPQTEDVLSTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRD 73
Query: 77 VVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKL 136
++A A+ G+GKTA F+IP LEK+K + + ++ALI+ PTRELALQT + V+ LGK +
Sbjct: 74 ILARAKNGTGKTAAFVIPTLEKVK--SKHNKIQALIMVPTRELALQTSQVVRTLGKHCGI 131
Query: 137 QSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 169
GG ++ + RL+ + I+V TPGR L
Sbjct: 132 SCMVTTGGTNLRDDILRLNETVHILVGTPGRVL 164
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFL 319
+ +++IP+ L GRD++A A+ G+GKTA F+
Sbjct: 60 IQEESIPVALAGRDILARAKNGTGKTAAFV 89
>sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DHH1 PE=3 SV=1
Length = 509
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 16 TVTISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGR 75
+ + D T D G F+ F L E+L G+ + G++ P+PIQ ++IP+ L GR
Sbjct: 9 NLNLPQRDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGR 68
Query: 76 DVVAMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTK 135
DV+A A+ G+GKTA F+IP L+++K + ++ALIL PTRELALQT + V+ LGK
Sbjct: 69 DVLARAKNGTGKTASFIIPSLQQIK--PKLNKIQALILVPTRELALQTSQVVRTLGKHLG 126
Query: 136 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 180
+Q GG S+ + RL+ ++V TPGR L + LS
Sbjct: 127 IQCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLS 171
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFL 319
+ +++IP+ L GRDV+A A+ G+GKTA F+
Sbjct: 56 IQEESIPMALAGRDVLARAKNGTGKTASFI 85
>sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana
GN=RH8 PE=2 SV=1
Length = 505
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 19 ISSNDDNGNTGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVV 78
+ + D T D G F+ + L E+L G+ ++G++ P+PIQ ++IP+ L GRD++
Sbjct: 113 LPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDIL 172
Query: 79 AMARTGSGKTACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQS 138
A A+ G+GKTA F IP+LEK+ + ++A+I+ PTRELALQT + KELGK K+Q
Sbjct: 173 ARAKNGTGKTAAFCIPVLEKIDQD--NNVIQAVIIVPTRELALQTSQVCKELGKHLKIQV 230
Query: 139 TCLLGGDSMDNQFARLHASPDIVVATPGRFL 169
GG S+ + RL+ ++V TPGR L
Sbjct: 231 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 261
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFLFYFFFRFDRGN 330
+ +++IP+ L GRD++A A+ G+GKTA F + D+ N
Sbjct: 157 IQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 171 IVVEMELKLSSIQYTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRF 230
IV EL L + Q KELGK K+Q GG S+ + RL+ ++V TPGR
Sbjct: 205 IVPTRELALQTSQ----VCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 260
Query: 231 L 231
L
Sbjct: 261 L 261
>sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp.
japonica GN=Os01g0172200 PE=2 SV=1
Length = 708
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 39 FQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGKTACFLIP---M 95
FQS G E+L+ V + G+ PTPIQ ++ P+ L RD+VA+A+TGSGKT +LIP +
Sbjct: 182 FQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFIL 241
Query: 96 LEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLH 155
L++L+ H + G L+LSPTRELA Q K+ G+ +++ S CL GG Q L
Sbjct: 242 LKRLQ-HNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLE 300
Query: 156 ASPDIVVATPGRFLHIVVEMELKLSSIQY 184
DIVVATPGR I+ + L + Y
Sbjct: 301 RGADIVVATPGRLNDILEMRRVSLHQVSY 329
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 294 TIPLVLEGRDVVAMARTGSGKTACFLFYFFFRFDRGNFN 332
+ P+ L RD+VA+A+TGSGKT +L F R N
Sbjct: 210 SWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHN 248
>sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ste13 PE=3 SV=1
Length = 485
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 28 TGDKKKKMGGGFQSFGLGFEVLKGVLKRGYKIPTPIQRKTIPLVLEGRDVVAMARTGSGK 87
T D K G F+ + L E+L G+ + G++ P+PIQ ++IP+ L GRD++A A+ G+GK
Sbjct: 35 TEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGK 94
Query: 88 TACFLIPMLEKLKTHAATSGVRALILSPTRELALQTFKFVKELGKFTKLQSTCLLGGDSM 147
TA F+IP LEK+ T S ++ LIL PTRELALQT + K LGK ++ GG ++
Sbjct: 95 TAAFVIPSLEKVDT--KKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTL 152
Query: 148 DNQFARLHASPDIVVATPGRFLHIV 172
+ RL+ + IVV TPGR L +
Sbjct: 153 RDDIIRLNDTVHIVVGTPGRVLDLA 177
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 290 VTDDTIPLVLEGRDVVAMARTGSGKTACFL 319
+ +++IP+ L GRD++A A+ G+GKTA F+
Sbjct: 70 IQEESIPIALSGRDILARAKNGTGKTAAFV 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,461,762
Number of Sequences: 539616
Number of extensions: 5231038
Number of successful extensions: 17577
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 12511
Number of HSP's gapped (non-prelim): 3658
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)