BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18034
(251 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328781928|ref|XP_397101.4| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis mellifera]
Length = 772
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/238 (56%), Positives = 179/238 (75%), Gaps = 5/238 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TV+F AT +HVEY+H+IL AGIS+TYIYS+LD +ARKINAAKFQT K+ VL+VTDVAA
Sbjct: 280 QTVIFAATMHHVEYIHQILEKAGISNTYIYSNLDASARKINAAKFQTNKVHVLIVTDVAA 339
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY++VS DE Y LDL LFLGR
Sbjct: 340 RGLDIPHLDNVINFNFPAKSKLFVHRVGRCARAGRTGTAYNIVSPDEYAYLLDLHLFLGR 399
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ S G I++ DG+ GK+PQ ++E+++ E++NW D++ ++K CNNAYK+Y+
Sbjct: 400 SLHIVPPS--GSIQNTDGIIGKLPQAMIEEELVELINWHNCSTDLKNMEKVCNNAYKQYI 457
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+SRP AS ES+K+VK+L ++ V P + ++ S NLL+K+ YRP T+ E G
Sbjct: 458 RSRPAASSESIKRVKDLHISEAGVIPEYSDVSS---NTMNLLSKIVNYRPQGTIFEIG 512
>gi|380029382|ref|XP_003698353.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis florea]
Length = 772
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 180/237 (75%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT +HVEY+H+IL AGIS+TYIYS+LD +ARKINAAKFQT K+ VL+VTDVAAR
Sbjct: 281 TVIFAATMHHVEYIHQILEKAGISNTYIYSNLDASARKINAAKFQTNKVHVLIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY++VS DE Y LDL LFLGR
Sbjct: 341 GLDIPHLDNVINFNFPAKSKLFVHRVGRCARAGRTGTAYNIVSPDEYAYLLDLHLFLGRS 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ S G I++ DG+ GK+PQ ++E++++E++NW D++ ++K C+NAYK+Y++
Sbjct: 401 LHIVPSS--GSIQNTDGIIGKMPQAMIEEELAELINWHNCSTDLKNMEKVCSNAYKQYIR 458
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRP AS ES+K+VK+L ++ V P + ++ S NLL+K+ YRP T+ E G
Sbjct: 459 SRPAASSESIKRVKDLHISEAGVIPEYSDVSS---NTMNLLSKIVNYRPQGTIFEIG 512
>gi|350423736|ref|XP_003493575.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Bombus impatiens]
Length = 772
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 180/237 (75%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT++HVEY+H+IL AGIS+TYIYS+LDP+ARKINAAKF T K+RVL+VTDVAAR
Sbjct: 281 TVIFAATQHHVEYIHQILEKAGISNTYIYSNLDPSARKINAAKFHTSKVRVLIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY+++S DE Y LDL LFLGR
Sbjct: 341 GLDIPQLDNVINFNFPAKSKLFVHRVGRCARAGRAGTAYNIISPDEYAYLLDLHLFLGR- 399
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
P+ S G I + DG+ GK+PQ ++E++++E++NW D+ ++K C+NAYK+Y++
Sbjct: 400 PLSIVPSF-GSIENTDGIVGKMPQAMIEEELAELINWHSCSTDLTSMEKVCDNAYKQYIR 458
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRP S ES+K+VKEL ++ V P + ++ + NLL+K+ YRP T+ E G
Sbjct: 459 SRPAPSSESIKRVKELHISEAGVIPEYSDVSLSTT---NLLSKIVNYRPQGTIFEIG 512
>gi|340723049|ref|XP_003399911.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Bombus terrestris]
Length = 772
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 177/237 (74%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT++HVEY+H+IL AGIS+TYIYS+LDP+ARKINAAKF T K+RVL+VTDVAAR
Sbjct: 281 TVIFAATQHHVEYIHQILEKAGISNTYIYSNLDPSARKINAAKFHTSKVRVLIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN+NFP K+KLFVHRVGRCARAGR G AY+++S DE Y LDL LFLGR
Sbjct: 341 GLDIPQLDNVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIISPDEYAYLLDLHLFLGRP 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ S G I + DG+ GK+PQ ++E++++E++NW D+ ++K C+NAYK+Y++
Sbjct: 401 LNIVPSS--GSIENTDGIVGKMPQAMIEEELAELINWHSCSTDLTSMEKVCDNAYKQYIR 458
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRP S ES+K+VKEL + V P + ++ + NLL+K+ YRP T+ E G
Sbjct: 459 SRPLPSSESIKRVKELHIGEAGVIPEYSDVSLSTT---NLLSKIVNYRPQGTIFEIG 512
>gi|242015175|ref|XP_002428249.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
gi|212512810|gb|EEB15511.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
Length = 723
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 174/238 (73%), Gaps = 1/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+HKIL A ISS+YIYSDLDPTARKINAAKFQ VL+VTDVAA
Sbjct: 272 QTLIFVATKHHVEYIHKILEKANISSSYIYSDLDPTARKINAAKFQNKVCSVLIVTDVAA 331
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLFVHRVGRCARAGR+G A+SLV S+E Y +DL LFLG+
Sbjct: 332 RGVDIPQLDYVINYHFPAKPKLFVHRVGRCARAGRTGTAFSLVCSEEFPYIIDLHLFLGK 391
Query: 121 KPVLADDSMKGKIR-HQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
K L D + K + GKIP ++E Q SE+++W D ++ ++K C+N YKKY
Sbjct: 392 KINLLDKTSKLTTSCNAKEALGKIPSDVIESQQSELISWHHNDEEISNLEKVCDNGYKKY 451
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+KSRPGAS+ES+K+ KEL+L ++VHP FR+ + E+ L+ K+ +YRP T+ E
Sbjct: 452 LKSRPGASIESLKRAKELDLYNVEVHPFFRDHFNGEENNLELVGKIKKYRPKGTIFEL 509
>gi|322787030|gb|EFZ13254.1| hypothetical protein SINV_10425 [Solenopsis invicta]
Length = 775
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 177/237 (74%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T +HVEY+H+IL AGIS+T+IYS+LDP+ARKINAAKFQ GK+RVL+VTDVAAR
Sbjct: 281 TIIFVETMHHVEYIHQILDKAGISNTFIYSNLDPSARKINAAKFQMGKVRVLIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY++VSSDE Y LDL LFLGR
Sbjct: 341 GIDIPHLDFVINFNFPAKSKLFVHRVGRCARAGRAGTAYNIVSSDEYPYLLDLHLFLGRP 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ + G + + GK+PQ ++E++++E++NW D+ ++K CNNAY++YVK
Sbjct: 401 LTIVPTT--GSTENMESAVGKLPQAMIEEELAELINWHNTSTDLINMRKVCNNAYQQYVK 458
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRPGAS+ESVK++KEL + V P + + A + ++++M YRP T+ E G
Sbjct: 459 SRPGASMESVKRIKELRINEAGVLPEYSDDSHAAAD---IISRMKNYRPQGTIFEIG 512
>gi|270000966|gb|EEZ97413.1| hypothetical protein TcasGA2_TC011242 [Tribolium castaneum]
Length = 761
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/238 (58%), Positives = 176/238 (73%), Gaps = 7/238 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF AT++HVEY+H IL G+S+TYIYS+LDP+ARKINAAKF TGK++VLVVTDVAA
Sbjct: 277 QTVVFAATRHHVEYIHMILDRVGVSNTYIYSNLDPSARKINAAKFSTGKVKVLVVTDVAA 336
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFP K+KLFVHRVGRCARAGRSG AYSLV+ DE Y LDL LFLGR
Sbjct: 337 RGIDIPQLDNVINYNFPAKSKLFVHRVGRCARAGRSGTAYSLVTPDEYPYLLDLHLFLGR 396
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P+ S+K + ++ G GKIPQ L+E+Q S ++ E + D+ ++K NAY +YV
Sbjct: 397 -PL----SIKTRTENE-GSVGKIPQALLEEQHSALLTLHENNIDLVSMKKVTENAYLQYV 450
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGS-AEQEKFNLLTKMSEYRPPSTVLEF 237
+SRP AS +S ++VKEL A+ +HP+F + E+E+ NLL KM YRP T+ E
Sbjct: 451 RSRPAASSDSNRRVKELAFASCGIHPIFGDYKEYVEEERENLLEKMKSYRPQGTIFEI 508
>gi|156552297|ref|XP_001600622.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Nasonia
vitripennis]
Length = 782
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/236 (56%), Positives = 173/236 (73%), Gaps = 5/236 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT +HVEY+H+IL AGI +T+IYS+LDP+ARKINAAKFQ GK++VLVVTDVAAR
Sbjct: 283 TVIFAATMHHVEYIHQILDQAGILNTFIYSNLDPSARKINAAKFQNGKVKVLVVTDVAAR 342
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN+NFP K+KLF+HRVGRCARAGRSG AY++V+ DE Y LDL LFLGR
Sbjct: 343 GIDIPHLDNVINFNFPAKSKLFIHRVGRCARAGRSGTAYNIVAPDEYAYLLDLHLFLGRS 402
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ S I +G GK+PQ ++E+++SE++ W E D+ +Q CNNAY++Y +
Sbjct: 403 FNIVPVSEAKNI--PEGSIGKMPQSMIEEELSELIAWHENVTDIANMQNVCNNAYQQYCR 460
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
SRP AS ES K++KEL++ + P FR+ A E NLL+KM YRP T+ E
Sbjct: 461 SRPPASAESNKRIKELDINRAGILPEFRD---ANDEAANLLSKMKSYRPRGTIFEI 513
>gi|307175593|gb|EFN65503.1| ATP-dependent RNA helicase DDX54 [Camponotus floridanus]
Length = 751
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 174/237 (73%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T +HVEY+H+IL A IS+T+IYS+LDP ARKINAAKFQTGK++VL+VTDVAAR
Sbjct: 253 TIIFAETMHHVEYIHQILDKANISNTFIYSNLDPCARKINAAKFQTGKVKVLIVTDVAAR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN+NFP K+KLFVHRVGRCARAGR G AY++VSSDE Y LDL LFLGR
Sbjct: 313 GIDIPYLDYVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIVSSDEYPYLLDLHLFLGRP 372
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ + G I + + GK+PQ ++E+++ E++NW D+ +Q+ CNNAY++YV+
Sbjct: 373 LTIMPST--GSIENVESAVGKMPQSMIEEELGELINWHNSSTDLTNMQRVCNNAYQRYVR 430
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRPGAS ESVK++KEL + + P + ++ + +++KM YRP T+ E G
Sbjct: 431 SRPGASTESVKRIKELCINEAGILPQYSDVSPTAAD---IISKMKSYRPKGTIFEIG 484
>gi|383849107|ref|XP_003700188.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Megachile
rotundata]
Length = 770
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 173/237 (72%), Gaps = 5/237 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT +HVEY+H +L AGIS+T+IYS+LDP+ARKINAAKFQT K++VLVVTDVAAR
Sbjct: 281 TVIFAATMHHVEYIHMVLDKAGISNTFIYSNLDPSARKINAAKFQTNKVKVLVVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY+++ DE Y LDL LFL R
Sbjct: 341 GLDIPHLDNVINFNFPAKSKLFVHRVGRCARAGRTGTAYNIIGPDEYAYLLDLHLFLSRP 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ S G +G GK+PQ ++E++++E++NW D++ ++K C NAYK+Y++
Sbjct: 401 LHIIPPS--GTAEGTEGAIGKMPQSMIEEELAELINWHNSSTDLQNMEKVCENAYKQYIR 458
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRP AS ES+K+VKEL + V P + ++ S NLL+K+ YRP T+ E G
Sbjct: 459 SRPTASSESIKRVKELNINQAGVIPEYSDVSS---NTLNLLSKIVNYRPQGTIFEIG 512
>gi|307193157|gb|EFN76062.1| ATP-dependent RNA helicase DDX54 [Harpegnathos saltator]
Length = 772
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/236 (55%), Positives = 173/236 (73%), Gaps = 5/236 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T +HVEY+H+IL A I +T+IYS+LDP+ARKIN AKFQTGK +VL+VTDVAARG
Sbjct: 281 IIFAETMHHVEYIHQILDKAKIINTFIYSNLDPSARKINTAKFQTGKAKVLIVTDVAARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDIP LD VIN+NFP K+KLFVHRVGRCARAGR+G AY++VS DE Y LDL LFLGR P
Sbjct: 341 IDIPHLDCVINFNFPAKSKLFVHRVGRCARAGRAGTAYNIVSVDEYPYLLDLHLFLGR-P 399
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+L + G + + GK+PQ ++E++++E++NW D+ +QK CNNAY++YV+S
Sbjct: 400 LLIVPAT-GSTENMESAVGKMPQTMIEEELAELINWHNNSTDLTNMQKVCNNAYQQYVRS 458
Query: 183 RPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
RPGAS ESVK+VKEL + V P + + S +L+++M YRP T+ E G
Sbjct: 459 RPGASTESVKRVKELRINAAGVLPQYSDGSSTA---MDLISRMKNYRPQGTIFEIG 511
>gi|332025035|gb|EGI65222.1| ATP-dependent RNA helicase DDX54 [Acromyrmex echinatior]
Length = 776
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 176/241 (73%), Gaps = 14/241 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T +HVEY+H+IL A IS+T+IYS+LDP+ARKINAAKFQ GK+RVL+VTDVAARG
Sbjct: 282 IIFAETMHHVEYIHQILDKADISNTFIYSNLDPSARKINAAKFQIGKVRVLIVTDVAARG 341
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDIP LD VIN+NFP K+KLFVHRVGRCARAGR G AY++VSSDE Y LDL LFLGR
Sbjct: 342 IDIPHLDCVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIVSSDEYPYLLDLHLFLGRPL 401
Query: 123 VL-----ADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
+ D+SM+ + GK+PQ ++E++++E++NW + D+ ++K CNNAY+
Sbjct: 402 TIVPTTETDESMEYAV-------GKLPQAMVEEELAELINWHNISTDLINMRKVCNNAYQ 454
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+YV+SRP AS ESVK++KEL + + P + + ++ +++++M YRP T+ E
Sbjct: 455 QYVRSRPNASAESVKRIKELRINEAGILPQYTD--ASHINTADIISRMKNYRPQGTIFEI 512
Query: 238 G 238
G
Sbjct: 513 G 513
>gi|328708487|ref|XP_003243704.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Acyrthosiphon
pisum]
Length = 777
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/246 (51%), Positives = 178/246 (72%), Gaps = 13/246 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
MT++F TK+HV+++H +L I +T+IYSDLDPTARKINA+KFQTG ++ L+ TD+AA
Sbjct: 274 MTIIFAPTKHHVDFIHLLLDFQDIPNTFIYSDLDPTARKINASKFQTGSVKTLITTDIAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY FP K+KLFVHRVGRCARAG+ G AYSLV+ DE+CY LDL LFLGR
Sbjct: 334 RGIDIPQLDTVINYTFPAKSKLFVHRVGRCARAGKVGQAYSLVTRDEMCYLLDLHLFLGR 393
Query: 121 --KPVL----ADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
PVL +DD DG+FG +PQ L+E+++ ++ +W D+ KTC N
Sbjct: 394 PFSPVLETPKSDDDT-------DGLFGIVPQLLLEEELGQLTSWYTSSIDVINSLKTCTN 446
Query: 175 AYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTV 234
YK Y+KSRPGASV+SV++ K++ L+ + HP+F+ I +A+ + + ++++ +RP +TV
Sbjct: 447 GYKNYIKSRPGASVDSVRRAKKINLSVIAEHPMFQKIIAADMGRIDFVSRIKNFRPETTV 506
Query: 235 LEFGKA 240
E G++
Sbjct: 507 FEMGQS 512
>gi|291239093|ref|XP_002739459.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Saccoglossus
kowalevskii]
Length = 851
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 168/238 (70%), Gaps = 4/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT +HV+Y+ +IL AGI+ +IYS LDP ARKIN AKF K V++VTDVAAR
Sbjct: 323 TVIFLATMHHVDYIKEILTQAGINCCHIYSSLDPAARKINVAKFTHKKAMVMLVTDVAAR 382
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN+NFP K KLFVHRVGR ARAGR+G AYSL++SDEL Y LDL LFLGR
Sbjct: 383 GIDIPLLDNVINFNFPAKPKLFVHRVGRVARAGRTGTAYSLIASDELPYLLDLHLFLGRP 442
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A S R D +FG++PQ +++D+ + ++ E D++ ++ CNNAYK+YVK
Sbjct: 443 LKCASPSHS---RDADYLFGRVPQRVVDDEEATVLTLHEQSLDIDTMKHVCNNAYKQYVK 499
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
SRP + ESVK++KE++++ + +HP+F I E + ++ ++ +Y+P +T+ E G
Sbjct: 500 SRPAPAPESVKRMKEIDVSRIAIHPIFGEYIDKDENNRVQMVDEIKKYKPHTTIFEVG 557
>gi|328708524|ref|XP_001949320.2| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Acyrthosiphon pisum]
Length = 478
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 155/212 (73%), Gaps = 13/212 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
MT++F TK+HV+++H +L I +T+IYSDLDPTARKINA+KFQTG ++ L+ TD+AA
Sbjct: 274 MTIIFAPTKHHVDFIHLLLDFQDIPNTFIYSDLDPTARKINASKFQTGSVKTLITTDIAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY FP K+KLFVHRVGRCARAG+ G AYSLV+ DE+CY LDL LFLGR
Sbjct: 334 RGIDIPQLDTVINYTFPAKSKLFVHRVGRCARAGKVGQAYSLVTRDEMCYLLDLHLFLGR 393
Query: 121 --KPVL----ADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
PVL +DD DG+FG +PQ L+E+++ ++ +W D+ KTC N
Sbjct: 394 PFSPVLETPKSDDD-------TDGLFGIVPQLLLEEELGQLTSWYTSSIDVINSLKTCTN 446
Query: 175 AYKKYVKSRPGASVESVKKVKELELATMQVHP 206
YK Y+KSRPGASV+SV++ K++ L+ + HP
Sbjct: 447 GYKNYIKSRPGASVDSVRRAKKINLSVIAEHP 478
>gi|405975829|gb|EKC40371.1| ATP-dependent RNA helicase DDX54, partial [Crassostrea gigas]
Length = 742
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 167/238 (70%), Gaps = 4/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+HVEY+H IL AGI STYIYS LDP+ARKIN AKFQ K++VL+VTD+AA
Sbjct: 277 QTVVFAATKHHVEYLHMILTYAGIDSTYIYSSLDPSARKINVAKFQHKKVKVLIVTDLAA 336
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN NFP K+KLFVHRVGR ARAGR G AYSLV+ DE+ + LDL +FLGR
Sbjct: 337 RGIDIPLLDNVINVNFPAKSKLFVHRVGRVARAGREGCAYSLVAQDEVPFLLDLYIFLGR 396
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+A S + +DG+ G +PQ +++++ ++ W + D+ ++K NA KKY+
Sbjct: 397 SLNIA--SQLKNVEDKDGVLGDVPQTVIDEEEEQLRLWHKDHIDLINMKKVVGNAQKKYL 454
Query: 181 KSRPGASVESVKKVKELELA-TMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
+SRP + ES+K+ K+++ A + +HP+F + + EQ+K LL + Y+ ST+ E
Sbjct: 455 RSRPLPAKESIKRYKQIQSADNIGLHPVFAKECSTEEQQKNELLNALKAYKGHSTIFE 512
>gi|167518760|ref|XP_001743720.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777682|gb|EDQ91298.1| predicted protein [Monosiga brevicollis MX1]
Length = 787
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 162/242 (66%), Gaps = 8/242 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TV+F ATK+HVE++ ++L A STY Y LDPTARKIN AKF+ GK +L+VTDVAA
Sbjct: 246 LTVIFVATKHHVEFLRELLAKANFESTYSYGSLDPTARKINVAKFRNGKAPILLVTDVAA 305
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY+FP KLFVHRVGR ARAGRSG AYS + +DEL Y +DL +FLGR
Sbjct: 306 RGIDIPMLDYVINYDFPAAPKLFVHRVGRVARAGRSGTAYSFIGNDELPYVVDLHVFLGR 365
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
KP L K R +DG+FG +PQ ++++ + + ++ D++ + K N+YK
Sbjct: 366 KFKPAL-----KRSKREEDGLFGAVPQSVLDEDREAVESHLKGSVDLQSLHKVMINSYKN 420
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
Y +SRP A+ ESVK+ K++E Q+HP F I + E EK +L +S ++P TV E
Sbjct: 421 YDRSRPQAATESVKRSKQVEEIGYQLHPEFLSRIATGELEKETVLKALSRFKPSQTVFEV 480
Query: 238 GK 239
K
Sbjct: 481 NK 482
>gi|354497511|ref|XP_003510863.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 1 [Cricetulus
griseus]
Length = 876
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 165/241 (68%), Gaps = 6/241 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QTVVFVATKHHAEYLMELLTAQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA + S+ G + +DG+ G++PQ +++D+ S + +E D+ G+ + +NA
Sbjct: 459 SITLAQPHEEPSVAGAV-GRDGVLGRVPQTVVDDEDSGLQTALEASLDLRGLHRVADNAQ 517
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+LA + +HPLF + E+++ LL + YR +T+
Sbjct: 518 QQYVRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEGERQRLRLLDSVKSYRTRTTIF 577
Query: 236 E 236
E
Sbjct: 578 E 578
>gi|321464010|gb|EFX75021.1| hypothetical protein DAPPUDRAFT_306922 [Daphnia pulex]
Length = 825
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 165/241 (68%), Gaps = 5/241 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF AT +HVEY+H +L AGIS+TYIYS LD ARKI+AAKFQT + V++ TDVAA
Sbjct: 278 LTLVFAATMHHVEYLHLLLDKAGISNTYIYSSLDQAARKIHAAKFQTKQTHVMITTDVAA 337
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFP KAKLFVHRVGR ARAGRSG AYSLV+ DEL +DL LFLGR
Sbjct: 338 RGIDIPLLDNVINYNFPAKAKLFVHRVGRVARAGRSGCAYSLVALDELPALVDLHLFLGR 397
Query: 121 KPV--LADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
PV + D + GK DG G++ Q +++D S + W + +++ + K +AYK+
Sbjct: 398 -PVKQIPQDGL-GKDVDWDGFLGRVGQTVIDDGSSAMTLWHQESVELQNMIKVYTSAYKQ 455
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLEF 237
Y +S P S ESVKK KE++L + HP+F S E ++ NLL +M YRP T+ E
Sbjct: 456 YKRSCPPPSHESVKKAKEIKLELLGPHPVFVAESSELEGDRLNLLEQMKSYRPHHTIFEI 515
Query: 238 G 238
G
Sbjct: 516 G 516
>gi|344257761|gb|EGW13865.1| ATP-dependent RNA helicase DDX54 [Cricetulus griseus]
Length = 861
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 323 QTVVFVATKHHAEYLMELLTAQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 382
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 383 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 442
Query: 121 KPVLAD--DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + G + +DG+ G++PQ +++D+ S + +E D+ G+ + +NA ++
Sbjct: 443 SITLAQPHEEPSGAV-GRDGVLGRVPQTVVDDEDSGLQTALEASLDLRGLHRVADNAQQQ 501
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP S ES+K+ KEL+LA + +HPLF + E+++ LL + YR +T+ E
Sbjct: 502 YVRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEGERQRLRLLDSVKSYRTRTTIFE 560
>gi|354497513|ref|XP_003510864.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Cricetulus
griseus]
Length = 875
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QTVVFVATKHHAEYLMELLTAQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLAD--DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + G + +DG+ G++PQ +++D+ S + +E D+ G+ + +NA ++
Sbjct: 459 SITLAQPHEEPSGAV-GRDGVLGRVPQTVVDDEDSGLQTALEASLDLRGLHRVADNAQQQ 517
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP S ES+K+ KEL+LA + +HPLF + E+++ LL + YR +T+ E
Sbjct: 518 YVRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEGERQRLRLLDSVKSYRTRTTIFE 576
>gi|363740165|ref|XP_003642273.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Gallus gallus]
Length = 858
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 168/239 (70%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L GI T+IYS LD TARKIN AKF GK +VL+VTDVAA
Sbjct: 315 QTVVFVATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCQVLLVTDVAA 374
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K+KLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LFLGR
Sbjct: 375 RGLDIPMLDNVINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEMPYIFDLHLFLGR 434
Query: 121 KPVLADD--SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
+LA+ ++ G DG+ G++PQ L++D+ ++ E +++ +++ +NA K+
Sbjct: 435 PLILAESXCTVPGAA-DADGVLGRVPQSLVDDEECLLLTDHEGSLELQSLRRVADNAQKQ 493
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLE 236
Y++SRPG S ES+K+VKE++L+ + +HPLF + E E+ L+ + Y+ +T+ E
Sbjct: 494 YLRSRPGPSPESIKRVKEMDLSQLGIHPLFSAHFEDTELERLKLVDSIKAYKSKATIFE 552
>gi|327282682|ref|XP_003226071.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Anolis
carolinensis]
Length = 840
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 159/237 (67%), Gaps = 3/237 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+H EY+ ++L G+ T++YS LD TARKIN KF GK VL+VTD+AA
Sbjct: 307 QTIVFVATKHHTEYLKELLTAQGVDCTHVYSSLDQTARKINIGKFTHGKCSVLIVTDLAA 366
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY+FP K KLF+HRVGR ARAGRSG AYS V+ DE Y DL LFLGR
Sbjct: 367 RGIDIPLLDNVINYSFPAKPKLFLHRVGRVARAGRSGTAYSFVAPDETPYLFDLHLFLGR 426
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
VLA S K + DGMFG++PQ +++D+ S + E +++ +++ +NA K+Y
Sbjct: 427 PLVLA--SPHEKPKDTDGMFGRVPQSIIDDEESLLQTDHERSQELQSLRQVADNAQKQYQ 484
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
KSRP S ES+K+VKE++ + + +HPLF + E E+ + + YR +T+ E
Sbjct: 485 KSRPAPSSESIKRVKEMDFSLLGIHPLFSSRFEGDEMERLKFVDSIKTYRSKATIFE 541
>gi|297484847|ref|XP_002694562.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
gi|296478588|tpg|DAA20703.1| TPA: DEAD box RNA helicase DP97-like [Bos taurus]
Length = 876
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 459
Query: 121 KPVLADDSMK-GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DG+ G++PQG+++D+ + +E ++ G+ + NNA ++Y
Sbjct: 460 ALTLARPPEEPSGTEGGDGVLGRVPQGVVDDEDCGLRTSLEASLELRGLSRVANNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+LA + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFE 577
>gi|440898266|gb|ELR49795.1| ATP-dependent RNA helicase DDX54 [Bos grunniens mutus]
Length = 872
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 459
Query: 121 KPVLADDSMK-GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DG+ G++PQG+++D+ + +E ++ G+ + NNA ++Y
Sbjct: 460 ALTLARPPEEPSGTEGGDGVLGRVPQGVVDDEDCGLRTSLEASLELRGLNRVANNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+LA + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFE 577
>gi|348551186|ref|XP_003461411.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Cavia
porcellus]
Length = 876
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 164/240 (68%), Gaps = 6/240 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHCEYLSELLSTQRVSCAHIYSALDPTARKINLARFTHGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLVS DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVSPDEVPYLLDLHLFLGR 459
Query: 121 KPVLADDSMK--GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA S + G + DG+ G++PQ +++D+ S + +E ++ + + +NA ++
Sbjct: 460 SLTLARPSEEPAGGV---DGVLGRVPQTVVDDEDSGLRAALEASLELRSLGRVADNAQQQ 516
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
YV+SRP S ES+K+ KEL+LA + +HPLF + AE ++ L+ + +YR +T+ E
Sbjct: 517 YVRSRPAPSPESIKRAKELDLAGLSLHPLFSSRFEEAELQRLRLVDGIKQYRSRATIFEI 576
>gi|348551184|ref|XP_003461410.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Cavia
porcellus]
Length = 875
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 164/240 (68%), Gaps = 6/240 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHCEYLSELLSTQRVSCAHIYSALDPTARKINLARFTHGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLVS DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVSPDEVPYLLDLHLFLGR 459
Query: 121 KPVLADDSMK--GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA S + G + DG+ G++PQ +++D+ S + +E ++ + + +NA ++
Sbjct: 460 SLTLARPSEEPAGGV---DGVLGRVPQTVVDDEDSGLRAALEASLELRSLGRVADNAQQQ 516
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
YV+SRP S ES+K+ KEL+LA + +HPLF + AE ++ L+ + +YR +T+ E
Sbjct: 517 YVRSRPAPSPESIKRAKELDLAGLSLHPLFSSRFEEAELQRLRLVDGIKQYRSRATIFEI 576
>gi|226532373|ref|NP_001142290.1| uncharacterized protein LOC100274459 [Zea mays]
gi|194708046|gb|ACF88107.1| unknown [Zea mays]
Length = 642
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 6/241 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
VVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 107 QNVVFVATKHHAEYLTELLTGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 166
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 167 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 226
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA + S G + +DG+ G++PQ +++D+ S + ++ +++G+Q+ NNA
Sbjct: 227 SVTLARPHEEPSSAGAV-GRDGVLGRVPQSVVDDEDSSLQTALQASLELQGLQRVANNAQ 285
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVL 235
++Y++SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+
Sbjct: 286 QQYLRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIF 345
Query: 236 E 236
E
Sbjct: 346 E 346
>gi|355683380|gb|AER97088.1| DEAD box polypeptide 54 [Mustela putorius furo]
Length = 877
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 161/239 (67%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 339 QTVVFVATKHHTEYLSELLTTQGVSCAHIYSALDPTARKINLAKFTHGKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+NY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVVNYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
P + G DG+ G++PQ +++D+ S + + ++ G+ + +NA ++
Sbjct: 459 ALTPARPHEGSSG-AGSVDGVLGRVPQSVVDDEESSLRGTLAASLELRGLGRVADNAQQQ 517
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP AS ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 518 YVRSRPAASPESIKRAKELDLAGLGLHPLFSSRFEERELQRLKLVDSIRNYRSRATIFE 576
>gi|300796770|ref|NP_001178477.1| ATP-dependent RNA helicase DDX54 [Rattus norvegicus]
Length = 874
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 164/240 (68%), Gaps = 5/240 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
VVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QNVVFVATKHHAEYLTELLTGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLA---DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA ++ G + +DG+ G++PQ +++D+ S + ++ +++G+Q+ NNA +
Sbjct: 459 SVTLARPHEEPSSGAV-GRDGVLGRVPQSVVDDEDSSLQTALQASLELQGLQRVANNAQQ 517
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+Y++SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 518 QYLRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 577
>gi|326929996|ref|XP_003211139.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Meleagris gallopavo]
Length = 831
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 167/239 (69%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L GI T+IYS LD TARKIN AKF GK +VL+VTDVAA
Sbjct: 303 QTVVFVATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCQVLLVTDVAA 362
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K+KLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LFLGR
Sbjct: 363 RGLDIPMLDNVINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEMPYIFDLHLFLGR 422
Query: 121 KPVLADDS--MKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
+LA+ S + G DG+ G++PQ L++D+ ++ E +++ +++ +NA K+
Sbjct: 423 PLILAESSCTVPGAA-DADGVLGRVPQSLVDDEECLLLTDHEGSLELQSLRRVADNAQKQ 481
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLE 236
Y++SRP S ES+K+VKE++++ + +HPLF + E E+ L+ + Y+ +T+ E
Sbjct: 482 YLRSRPXPSPESIKRVKEMDMSQLGIHPLFSAHFEDTELERLKLVDSIKAYKSKATIFE 540
>gi|48734612|gb|AAH71251.1| Ddx54 protein, partial [Mus musculus]
Length = 641
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 106 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 165
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 166 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 225
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 226 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 285
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 286 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 345
>gi|358416383|ref|XP_615157.5| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
Length = 885
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 117/237 (49%), Positives = 160/237 (67%), Gaps = 2/237 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN A+F GK L+VTD+AAR
Sbjct: 350 TVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAAR 409
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 410 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRA 469
Query: 122 PVLADDSMK-GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
LA + DG+ G++PQG+++D+ + +E ++ G+ + NNA ++YV
Sbjct: 470 LTLARPPEEPSGTEGGDGVLGRVPQGVVDDEDCGLRTSLEASLELRGLSRVANNAQQQYV 529
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 530 RSRPAPSPESIKRAKELDLAGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFE 586
>gi|301609527|ref|XP_002934380.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Xenopus (Silurana)
tropicalis]
Length = 847
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 157/236 (66%), Gaps = 1/236 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F ATK+H EY+ ++L + GI ++IYS LD TARKIN F GK+R L+VTDVAAR
Sbjct: 318 TVIFVATKHHAEYLRELLDMQGIPCSHIYSALDQTARKINLGLFLHGKVRALLVTDVAAR 377
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFP KAKLF+HRVGR ARAGRSG AYSL++ DE+ Y DL LFLGR
Sbjct: 378 GIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSLIAPDEIPYVYDLHLFLGRP 437
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA M DG+ G++PQ L++D+ + ++ E +++ + NAYK+Y+K
Sbjct: 438 LKLATAQMMETGADTDGVLGRVPQSLIDDEDALLITDRERSLELQNLHNVAENAYKQYIK 497
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES+K+VK+ + VHPLF +G E ++ + + Y+ +T+ E
Sbjct: 498 SRPTPSPESIKRVKDANYNLLGVHPLFWSQLGEEEMQRLKFVDGIKSYKSKATIFE 553
>gi|148687811|gb|EDL19758.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 855
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 320 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 379
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 380 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 439
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 440 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 499
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 500 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 559
>gi|28076989|ref|NP_082317.1| ATP-dependent RNA helicase DDX54 [Mus musculus]
gi|46576606|sp|Q8K4L0.1|DDX54_MOUSE RecName: Full=ATP-dependent RNA helicase DDX54; AltName: Full=DEAD
box protein 54
gi|21325958|gb|AAM47540.1|AF319547_1 ATP-dependent RNA-helicase [Mus musculus]
gi|55249609|gb|AAH43699.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 874
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 459 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 518
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 519 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 578
>gi|26327389|dbj|BAC27438.1| unnamed protein product [Mus musculus]
Length = 874
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 459 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 518
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 519 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 578
>gi|383421509|gb|AFH33968.1| ATP-dependent RNA helicase DDX54 isoform 1 [Macaca mulatta]
Length = 884
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA D S + DGM G++PQ +++++ S + + +E ++ G+ + +NA
Sbjct: 460 SLALARPLEDPSGAAGV---DGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+L + +HPLF + E+ ++ L+ + YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIF 576
Query: 236 E 236
E
Sbjct: 577 E 577
>gi|355564704|gb|EHH21204.1| hypothetical protein EGK_04216 [Macaca mulatta]
Length = 790
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA D S + DGM G++PQ +++++ S + + +E ++ G+ + +NA
Sbjct: 460 SLALARPLEDPSGAAGV---DGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+L + +HPLF + E+ ++ L+ + YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIF 576
Query: 236 E 236
E
Sbjct: 577 E 577
>gi|26327531|dbj|BAC27509.1| unnamed protein product [Mus musculus]
Length = 909
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 161/241 (66%), Gaps = 4/241 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 339 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 398
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 399 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 458
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 459 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 518
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 519 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 578
Query: 237 F 237
Sbjct: 579 I 579
>gi|18255213|gb|AAH21900.1| Ddx54 protein, partial [Mus musculus]
Length = 544
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 161/241 (66%), Gaps = 4/241 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 9 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 68
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 69 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 128
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 129 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 188
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 189 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 248
Query: 237 F 237
Sbjct: 249 I 249
>gi|259155174|ref|NP_001158829.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
gi|223647616|gb|ACN10566.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
Length = 875
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ ++L G+ YIYS LD TARKIN KF K VL+VTDVAAR
Sbjct: 322 TVVFVATKHHVEYLKELLSSEGVECAYIYSALDQTARKINIGKFVHRKAMVLIVTDVAAR 381
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFP KAKLF+HRVGR ARAGR G AYSLV +DE+ + DL LFLGR
Sbjct: 382 GIDIPLLDNVINYNFPSKAKLFLHRVGRVARAGRCGAAYSLVCTDEIPFVYDLHLFLGRP 441
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA + + DG+FG++PQ +++D+ S+++ E D++ +++ +NAYK+Y+K
Sbjct: 442 LQLATPDHQ---QESDGVFGRVPQSILDDEESQLITAHENSHDLQNLRRIADNAYKQYIK 498
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES K+VK EL +M VHPL + E E+ ++ + Y+ +T+ E
Sbjct: 499 SRPMPSPESFKRVKNTELPSMAVHPLLGSGLEKMELERLQMVDCIKGYKARATIFE 554
>gi|402887738|ref|XP_003907240.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Papio anubis]
Length = 883
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 161/241 (66%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA D S + DGM G++PQ +++++ S + + +E ++ G+ + +NA
Sbjct: 460 SLALARPLEDPSGAAGV---DGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+L + +HPLF E ++ L+ + YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLVGLGLHPLFSLRFEEEELQRLRLVDSIKNYRSRATIF 576
Query: 236 E 236
E
Sbjct: 577 E 577
>gi|443712578|gb|ELU05832.1| hypothetical protein CAPTEDRAFT_148777 [Capitella teleta]
Length = 902
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 164/247 (66%), Gaps = 21/247 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+HVEY++ IL A I +Y YS LD TARKI AKF+ + RVL+VTD+AA
Sbjct: 392 QTVVFLATKHHVEYLNMILTEAHIDCSYTYSSLDQTARKIQVAKFRANRTRVLLVTDLAA 451
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY+FP K KLFVHRVGR ARAGRSG AYSLV+ DEL + LDL LFLGR
Sbjct: 452 RGIDIPMLDNVINYHFPPKCKLFVHRVGRVARAGRSGTAYSLVAQDELAHVLDLQLFLGR 511
Query: 121 --------KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTC 172
KP+ AD+S + G PQ +++++ +++ W E + D+ G+ K
Sbjct: 512 PLTWVLSDKPI-ADESA--------SLIGCAPQSIIDEEEADLRKWHE-NVDIFGMTKVI 561
Query: 173 NNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGS---AEQEKFNLLTKMSEYR 229
+NA+K+Y+KS P AS ES+K+VKE+ + +HPLF G E+++ LL M Y+
Sbjct: 562 SNAFKQYMKSSPAASTESIKRVKEMANLNIGLHPLFGKSGGIQRGEEQRTQLLAAMRHYK 621
Query: 230 PPSTVLE 236
P +T+ E
Sbjct: 622 PQTTIFE 628
>gi|32967636|gb|AAH55026.1| Ddx54 protein, partial [Mus musculus]
Length = 690
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 160/240 (66%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 155 QTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAA 214
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V NY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 215 RGLDIPLLDNVTNYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 274
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA +
Sbjct: 275 SVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 334
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
+YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 335 QYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 394
>gi|109098826|ref|XP_001111246.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Macaca
mulatta]
Length = 883
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 162/241 (67%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVVPDEIPYLLDLHLFLGR 459
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA D S + DGM G++PQ +++++ S + + +E ++ G+ + +NA
Sbjct: 460 SLALARPLEDPSGAAGV---DGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+L + +HPLF + E+ ++ L+ + YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIF 576
Query: 236 E 236
E
Sbjct: 577 E 577
>gi|194214292|ref|XP_001915035.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Equus caballus]
Length = 860
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 320 QTVVFVATKHHAEYLSELLTTQRVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAA 379
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 380 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 439
Query: 121 KPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + G + DG+ G++PQ +++D+ + N +E +++G+ + +NA ++
Sbjct: 440 TLTLACPHEEPSGAV-GGDGVLGRVPQSVVDDEDCSLRNTLEASLELQGLGRVADNAQQQ 498
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 499 YVRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEKELQRLRLVDSIKSYRARATIFE 557
>gi|164419743|ref|NP_001104792.1| ATP-dependent RNA helicase DDX54 isoform 1 [Homo sapiens]
gi|19110894|gb|AAL85336.1|AF478457_1 ATP-dependent RNA helicase [Homo sapiens]
gi|119618445|gb|EAW98039.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_a [Homo
sapiens]
Length = 882
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|38014855|gb|AAH05848.2| DDX54 protein, partial [Homo sapiens]
Length = 864
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 323 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 382
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 383 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 442
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 443 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 502
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 503 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 560
>gi|397525044|ref|XP_003832488.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Pan paniscus]
Length = 884
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|410216684|gb|JAA05561.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253652|gb|JAA14793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293490|gb|JAA25345.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354051|gb|JAA43629.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 885
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|410216682|gb|JAA05560.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253650|gb|JAA14792.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293488|gb|JAA25344.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354049|gb|JAA43628.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 882
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|114647100|ref|XP_001152281.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 5 [Pan
troglodytes]
Length = 884
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|28301751|gb|AAN59978.1| DEAD box RNA helicase DP97 [Homo sapiens]
gi|119618446|gb|EAW98040.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_b [Homo
sapiens]
Length = 865
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 324 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 383
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 384 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 443
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 444 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 503
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 504 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 561
>gi|51094101|ref|NP_076977.3| ATP-dependent RNA helicase DDX54 isoform 2 [Homo sapiens]
gi|46576615|sp|Q8TDD1.2|DDX54_HUMAN RecName: Full=ATP-dependent RNA helicase DDX54; AltName:
Full=ATP-dependent RNA helicase DP97; AltName: Full=DEAD
box RNA helicase 97 kDa; AltName: Full=DEAD box protein
54
gi|162319036|gb|AAI56670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [synthetic construct]
Length = 881
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>gi|426374226|ref|XP_004053980.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Gorilla gorilla
gorilla]
Length = 881
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 163/242 (67%), Gaps = 10/242 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 -----KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
+P+ + G DGM G++PQ +++++ S + + +E ++ G+ + +NA
Sbjct: 460 SLTLSRPLEEPSGVAGV----DGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNA 515
Query: 176 YKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTV 234
++YV+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+
Sbjct: 516 QQQYVRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATI 575
Query: 235 LE 236
E
Sbjct: 576 FE 577
>gi|417405072|gb|JAA49261.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 876
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLSELLTTQRMSCAHIYSALDQTARKINLAKFTHGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 459
Query: 121 KPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + G + DG+ G++PQ L++D+ + + +E ++ G+ + +NA ++
Sbjct: 460 ALSLAQPQEEPSGAV-GADGVLGRVPQSLVDDEDCSLRSALEASLELRGLCRVADNALQQ 518
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP S ES+K+ KEL+LA + +HPLF N E ++ L+ + +YR +T+ E
Sbjct: 519 YVRSRPAPSPESIKRTKELDLAGLGLHPLFSSNFEEKELQRLRLVDGLRKYRSRATIFE 577
>gi|441629962|ref|XP_003274471.2| PREDICTED: ATP-dependent RNA helicase DDX54 [Nomascus leucogenys]
Length = 862
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 324 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAA 383
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 384 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 443
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ +NA ++Y
Sbjct: 444 SLTLARPLEEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLAHVADNAQQQY 503
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 504 VRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 561
>gi|62740160|gb|AAH94142.1| LOC495097 protein, partial [Xenopus laevis]
Length = 693
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 157/236 (66%), Gaps = 1/236 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F ATK+H EY+ ++L + GI ++IYS LD TARKIN F GK+R L+VTDVAAR
Sbjct: 320 TVIFVATKHHAEYLRELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAAR 379
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFP KAKLF+HRVGR ARAGRSG AYS ++ DE+ Y DL LFLGR
Sbjct: 380 GIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSFIAPDEIPYVYDLHLFLGRP 439
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA+ DG+ G++PQ L++D+ + ++ E +++ + + NAYK+Y+K
Sbjct: 440 LKLANAQNIETEADTDGVLGRVPQSLIDDEDALLITDRERSLELQNLHQVSENAYKQYIK 499
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES+K+VK+ + VHPLF +G E ++ + + Y+ +T+ E
Sbjct: 500 SRPTPSPESIKRVKDANYNLLGVHPLFWSQLGGEEMQRLKFVDGIKSYKSKATIFE 555
>gi|54038020|gb|AAH84268.1| LOC495097 protein, partial [Xenopus laevis]
Length = 717
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 157/236 (66%), Gaps = 1/236 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F ATK+H EY+ ++L + GI ++IYS LD TARKIN F GK+R L+VTDVAAR
Sbjct: 320 TVIFVATKHHAEYLRELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAAR 379
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFP KAKLF+HRVGR ARAGRSG AYS ++ DE+ Y DL LFLGR
Sbjct: 380 GIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSFIAPDEIPYVYDLHLFLGRP 439
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA+ DG+ G++PQ L++D+ + ++ E +++ + + NAYK+Y+K
Sbjct: 440 LKLANAQNIETEADTDGVLGRVPQSLIDDEDALLITDRERSLELQNLHQVSENAYKQYIK 499
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES+K+VK+ + VHPLF +G E ++ + + Y+ +T+ E
Sbjct: 500 SRPTPSPESIKRVKDANYNLLGVHPLFWSQLGGEEMQRLKFVDGIKSYKSKATIFE 555
>gi|297693028|ref|XP_002823828.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Pongo abelii]
Length = 883
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 460 SLTLARPLEEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KE++ + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKEMDFVGLGLHPLFSSHFEEEELQRLRLVDSIKSYRSRATIFE 577
>gi|147898895|ref|NP_001088266.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus laevis]
gi|83318280|gb|AAI08845.1| LOC495097 protein [Xenopus laevis]
Length = 846
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 157/237 (66%), Gaps = 1/237 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TV+F ATK+H EY+ ++L + GI ++IYS LD TARKIN F GK+R L+VTDVAA
Sbjct: 319 QTVIFVATKHHAEYLRELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAA 378
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFP KAKLF+HRVGR ARAGRSG AYS ++ DE+ Y DL LFLGR
Sbjct: 379 RGIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSFIAPDEIPYVYDLHLFLGR 438
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
LA+ DG+ G++PQ L++D+ + ++ E +++ + + NAYK+Y+
Sbjct: 439 PLKLANAQNIETEADTDGVLGRVPQSLIDDEDALLITDRERSLELQNLHQVSENAYKQYI 498
Query: 181 KSRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
KSRP S ES+K+VK+ + VHPLF +G E ++ + + Y+ +T+ E
Sbjct: 499 KSRPTPSPESIKRVKDANYNLLGVHPLFWSQLGGEEMQRLKFVDGIKSYKSKATIFE 555
>gi|403281618|ref|XP_003932278.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Saimiri boliviensis
boliviensis]
Length = 879
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGR 459
Query: 121 KPVLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA + S + DG+ G++PQ +++++ + + +E ++ G+ + +NA
Sbjct: 460 PLALALPLEEPSGAAGV---DGVLGRVPQSVVDEEDGGLQSTLEASLELRGLARVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVL 235
++YV+SRP S ES+K+ KEL+LA + +HPLF + E+ ++ L+ + YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEEELQRLRLVDSIRNYRSRATIF 576
Query: 236 E 236
E
Sbjct: 577 E 577
>gi|449268056|gb|EMC78927.1| ATP-dependent RNA helicase DDX54, partial [Columba livia]
Length = 797
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 161/241 (66%), Gaps = 8/241 (3%)
Query: 1 MTVVFTATKYHVEYVHK---ILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTD 57
TVVF ATK+H EY+ + +L GI T+IYS LD TARKIN AKF GK VL+VTD
Sbjct: 265 QTVVFVATKHHTEYLKEASSLLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTD 324
Query: 58 VAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
VAARG+DIP LD VINY+FP KAKLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LF
Sbjct: 325 VAARGLDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLF 384
Query: 118 LGRKPVLAD-DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LGR VLA M DG+ G++PQ L++D+ ++ E ++ +++ NA+
Sbjct: 385 LGRPLVLAGAQEMPADA---DGVLGRVPQSLVDDEECLLLTDQEGSLELRSLRRIAENAH 441
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVL 235
K+Y++SRPG S ES+K+ KEL+++ + +HPLF E E+ L+ + Y+ +T+
Sbjct: 442 KQYLRSRPGPSPESIKRAKELDVSQLGMHPLFSARFEDTELERLKLVDSIKTYKSKATIF 501
Query: 236 E 236
E
Sbjct: 502 E 502
>gi|198433176|ref|XP_002130371.1| PREDICTED: similar to ATP-dependent RNA helicase [Ciona
intestinalis]
Length = 816
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 168/240 (70%), Gaps = 5/240 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF +TK+HVE+V +L L I+ +Y+YS LD TARKIN AKF+ K VL+VTDVAA
Sbjct: 312 QTVVFVSTKHHVEFVKDVLKLFSINCSYVYSSLDHTARKINIAKFRNKKTMVLIVTDVAA 371
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN++FP K+KLFVHRVGR ARAGR+G AYSLV +EL Y +DL LFLGR
Sbjct: 372 RGLDIPMLDNVINFSFPAKSKLFVHRVGRVARAGRTGTAYSLVCPEELAYVIDLHLFLGR 431
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A + D ++G++ Q +++++ + + N ++ ++D++ + K NAYK+Y+
Sbjct: 432 PLNFAKTGQ--TYQAWDNVYGRVSQRIIDEEQAALQN-IKNNSDLQALLKVAQNAYKQYL 488
Query: 181 KSRPGASVESVKKVKE-LELATMQVHPLFRNIG-SAEQEKFNLLTKMSEYRPPSTVLEFG 238
KSRP AS ES+K+ +E L+ + +HP++ G ++E+ + LL+ + +Y+P ST+ E G
Sbjct: 489 KSRPAASSESIKRSREILQSTNIALHPIYDESGDTSEEARLELLSSVRKYKPNSTIFEIG 548
>gi|410904152|ref|XP_003965556.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Takifugu
rubripes]
Length = 863
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 156/240 (65%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ ++L L G+ YIYS LD TARKIN KF K VL+VTDVAAR
Sbjct: 319 TVVFAATKHHVEYLKELLTLEGVECAYIYSSLDQTARKINIGKFVHRKAMVLIVTDVAAR 378
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFP KAKLF+HRVGR RAGRSG AYS++ DE+ + DL LFLGR
Sbjct: 379 GIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAYSMICQDEMPFVFDLHLFLGRP 438
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A + +G+ G++PQ +++D+ S ++ E D++ + + NAYK+Y+K
Sbjct: 439 VQFA---TPDHTKDTEGVCGRVPQSILDDESSHLITTHENSLDLQNLHRVSENAYKQYLK 495
Query: 182 SRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFGKA 240
SRP S ES+++VK + ++M VHPL + E E+ ++ + Y+ ST+ E +
Sbjct: 496 SRPNPSTESIRRVKSTDSSSMAVHPLLGVGLEKTELERLQIVDAIKGYKSKSTIFEINSS 555
>gi|395834008|ref|XP_003790009.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Otolemur garnettii]
Length = 859
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 162/238 (68%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S T+IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 324 QTVVFVATKHHAEYLTELLTAQCVSCTHIYSALDQTARKINLAKFTLGKCSTLIVTDLAA 383
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 384 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 443
Query: 121 KPVLADDSMKGK-IRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + + DG+ G++PQ +++++ S + + +E ++ G+ + +NA ++Y
Sbjct: 444 ALTLAHPHEESSGLVGVDGVLGRVPQSVVDEEDSGLRSALEKSLELRGLGRVADNAQQQY 503
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 504 VRSRPAPSPESIKRAKELDLVGLSLHPLFSSCFEEEELQRLRLVDSIKNYRSRATIFE 561
>gi|351694739|gb|EHA97657.1| ATP-dependent RNA helicase DDX54 [Heterocephalus glaber]
Length = 876
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 164/243 (67%), Gaps = 10/243 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S T+IYS LD TARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLQELLSTQRVSCTHIYSALDQTARKINLARFTHGKCSTLIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLVS DE+ Y LDL LF+GR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVSPDEVPYLLDLHLFVGR 459
Query: 121 KPVLADDSMK----GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
LA + + G + DG+ G++PQ +++D+ + +E+ ++ + + +NA
Sbjct: 460 TLSLAPPNQEPTGAGSV---DGVLGRVPQSVVDDEDGGLRAALEVSLELRSLGRVADNAQ 516
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQE--KFNLLTKMSEYRPPSTV 234
++YV+SRP S ES+K+ KEL+L + +HPLF + G E+E + L+ + +YR +T+
Sbjct: 517 QQYVRSRPAPSPESIKRAKELDLVALGLHPLF-SSGFEEEELQRLRLVDSIRQYRSRATI 575
Query: 235 LEF 237
E
Sbjct: 576 FEI 578
>gi|449477372|ref|XP_004176637.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Taeniopygia guttata]
Length = 849
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 164/246 (66%), Gaps = 10/246 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L GI T+IYS LD TARKIN AKF GK VL+VTDVAA
Sbjct: 305 QTVVFVATKHHTEYLRELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAA 364
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN++FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LFLGR
Sbjct: 365 RGLDIPMLDNVINFSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGR 424
Query: 121 KPVL--ADDSMKGKIRH-------QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKT 171
VL A + G+ H G+ G++PQ L++D+ ++ + ++ +++
Sbjct: 425 PLVLAGAQEMPAGEGXHGVPWAADAGGVMGRVPQSLVDDEECLLLTDHQGSLELRSLRRV 484
Query: 172 CNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRP 230
+NA+K+Y++SRPG S ES+K+ K+L+++ + +HPLFR E ++ L+ + Y+
Sbjct: 485 ADNAHKQYLRSRPGPSPESIKRAKDLDVSQLGMHPLFRARFEDTELQRLKLVDSIKTYKS 544
Query: 231 PSTVLE 236
+T+ E
Sbjct: 545 KATIFE 550
>gi|359322902|ref|XP_003433427.2| PREDICTED: ATP-dependent RNA helicase DDX54 [Canis lupus
familiaris]
Length = 789
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 160/240 (66%), Gaps = 4/240 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S T+IYS LD TARKIN AKF K L+VTD+AA
Sbjct: 250 QTVVFVATKHHAEYLSELLTTQGVSCTHIYSALDQTARKINLAKFTHNKCSALIVTDLAA 309
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 310 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 369
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
P + G + DG+ G++PQ +++D+ S + + + ++ G+ + +NA ++
Sbjct: 370 ALTPARPHEGSLG-VAGVDGVLGRVPQSVVDDEESGLQSILTSSLELGGLSRVADNAQQQ 428
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
YV+SRP S ES+K+ KEL+L + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 429 YVRSRPAPSPESIKRAKELDLTGLGLHPLFSSRFEEKELQRLKLVDSIKNYRSRATIFEI 488
>gi|395513937|ref|XP_003761178.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Sarcophilus harrisii]
Length = 757
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+ T+IYS LD TARKIN AKF GK L+VTDVAA
Sbjct: 282 QTVVFVATKHHAEYLTELLTTQGVCCTHIYSSLDQTARKINLAKFVHGKCSALIVTDVAA 341
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINYNFP K+KLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LFLGR
Sbjct: 342 RGLDIPLLDNVINYNFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEVPYVFDLHLFLGR 401
Query: 121 KPVLADDSMKGKIR-HQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
VLA K DG+ G++P+ +++D+ ++ + ++++ +++ NA K+Y
Sbjct: 402 PLVLARPHEKPSGNASPDGVLGRVPRNVVDDEECRLLTDHDGSSELQSLRRVAENAPKQY 461
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
+SRPG S ES+K+ K+L+ + +HPLF + E+ E+ L+ + YR +T+ E
Sbjct: 462 SRSRPGPSPESIKRAKDLDPTLLGLHPLFSSQFEDEELERMKLVDSIKNYRSRATIFE 519
>gi|427785439|gb|JAA58171.1| Putative atp-dependent rna helicase ddx54 [Rhipicephalus
pulchellus]
Length = 816
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T +F AT++H EY+ IL AG++ TY+YS LD AR+IN +KFQ ++ V++VTDVAA
Sbjct: 300 LTFIFVATRHHAEYLRDILERAGVTCTYVYSSLDQAARRINVSKFQARQVPVMLVTDVAA 359
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP + KLFVHRVGR ARAGR+G AYSLV+ DE Y LDL LFLGR
Sbjct: 360 RGLDIPLLDNVINYSFPPRPKLFVHRVGRVARAGRTGTAYSLVAPDEAPYLLDLHLFLGR 419
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ L++ + + + G+ G++PQ ++++++ + + D++ +++ C+NA +Y+
Sbjct: 420 ELSLSNANSSPE---ESGLCGRVPQTVIDEELELLRCMQQQSVDLQNMERVCSNAMIQYL 476
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
KSRP S ESVK++K+ + HPLF+ + E + LL M +++P ST+ E G
Sbjct: 477 KSRPAPSSESVKRMKQYLKDDLPPHPLFQVKSTDEDTRAKLLQGMKKFKPASTIFEIG 534
>gi|432885906|ref|XP_004074815.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Oryzias
latipes]
Length = 852
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 152/237 (64%), Gaps = 4/237 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+HVEY+ ++L GI YIYS LD TARKIN KF K VL+VTDVAA
Sbjct: 321 QTVVFVATKHHVEYLRELLSSEGIECAYIYSALDQTARKINIGKFVHRKAMVLIVTDVAA 380
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFP K KLF+HRVGR RAGRSG YSL+ DE+ + DL LFLGR
Sbjct: 381 RGIDIPMLDIVINYNFPSKPKLFLHRVGRVGRAGRSGTTYSLICPDEMPFLYDLHLFLGR 440
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A + DG+ G++PQ +++D+ S ++ E D++ + + NAYK+Y+
Sbjct: 441 PVQFA---TLDHTQECDGVLGRVPQNILDDEGSNLITAHENSLDLQNLHRVSENAYKQYL 497
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLE 236
KSRP S ES+++VK L+L+ M VHP + E E+ ++ + Y+ ST+ E
Sbjct: 498 KSRPNPSAESIRRVKNLDLSCMAVHPFLGCGLEKMELERLQIVDAIKGYKSKSTIFE 554
>gi|432885908|ref|XP_004074816.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Oryzias
latipes]
Length = 853
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 152/237 (64%), Gaps = 4/237 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+HVEY+ ++L GI YIYS LD TARKIN KF K VL+VTDVAA
Sbjct: 322 QTVVFVATKHHVEYLRELLSSEGIECAYIYSALDQTARKINIGKFVHRKAMVLIVTDVAA 381
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFP K KLF+HRVGR RAGRSG YSL+ DE+ + DL LFLGR
Sbjct: 382 RGIDIPMLDIVINYNFPSKPKLFLHRVGRVGRAGRSGTTYSLICPDEMPFLYDLHLFLGR 441
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A + DG+ G++PQ +++D+ S ++ E D++ + + NAYK+Y+
Sbjct: 442 PVQFA---TLDHTQECDGVLGRVPQNILDDEGSNLITAHENSLDLQNLHRVSENAYKQYL 498
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLE 236
KSRP S ES+++VK L+L+ M VHP + E E+ ++ + Y+ ST+ E
Sbjct: 499 KSRPNPSAESIRRVKNLDLSCMAVHPFLGCGLEKMELERLQIVDAIKGYKSKSTIFE 555
>gi|241999744|ref|XP_002434515.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215497845|gb|EEC07339.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 771
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF AT++H EY+ IL A + T +YS LD ARKIN +KF+ ++ V++VTDVAA
Sbjct: 262 LTLVFVATRHHAEYLRDILERADVPCTQVYSSLDQAARKINVSKFRARQVPVMLVTDVAA 321
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN++FP KAKLFVHRVGR ARAGRSG AYSLV+ DE Y LDL LFLGR
Sbjct: 322 RGIDIPLLDNVINHSFPPKAKLFVHRVGRVARAGRSGTAYSLVAPDEAPYLLDLHLFLGR 381
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A S ++ + G+ GK+PQ +++++ + E ++D++ +++ C+NA +Y+
Sbjct: 382 PMQFA--SAASQV-PESGLCGKVPQMVIDEEAEMLRVLHEQNSDLQNMERVCSNAMIQYL 438
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
KSRP S ES K++K+ + HP+FR + E + +LL M ++PPST+ E G
Sbjct: 439 KSRPPPSSESAKRMKQFLKEDIAPHPVFRAKSADEDVRASLLQGMKRFKPPSTIFEIG 496
>gi|156396703|ref|XP_001637532.1| predicted protein [Nematostella vectensis]
gi|156224645|gb|EDO45469.1| predicted protein [Nematostella vectensis]
Length = 700
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 160/237 (67%), Gaps = 9/237 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ ++L GI +Y+YS LD TAR IN KFQ K V+VVTDVAAR
Sbjct: 263 TLIFAATKHHVEYLKEMLLSGGIDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP KAKLFVHRVGR ARAGRSG AYSLV++DE+ + LDL LFLGR
Sbjct: 323 GIDIPMLDNVINFHFPPKAKLFVHRVGRVARAGRSGTAYSLVANDEVAHLLDLHLFLGRP 382
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
L S G + +DG+FG +PQ +++++ + + + D+ +Q C NAYK+Y++
Sbjct: 383 LRL---SATGS-QEEDGVFGGMPQQVLDEEDATLRTIHDNSHDLMTLQGVCANAYKQYIR 438
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGS--AEQEKFNLLTKMSEYRPPSTVLE 236
SRP AS ESVK+ KEL + VHPL +GS + L+ + ++P T+ E
Sbjct: 439 SRPQASSESVKRSKELMATPLAVHPL---LGSEVTDVPLSQLIDSVRNFKPRQTIFE 492
>gi|442750425|gb|JAA67372.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 767
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 158/238 (66%), Gaps = 3/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF AT++H EY+ IL A + T +YS LD ARKIN +K + ++ V++VTDVAA
Sbjct: 258 LTLVFVATRHHAEYLRDILERADVPCTQVYSSLDQAARKINVSKLRARQVPVMLVTDVAA 317
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN++FP KAKLFVHRVGR ARAGRSG AYSLV+ DE Y LDL LFLGR
Sbjct: 318 RGIDIPLLDNVINHSFPPKAKLFVHRVGRVARAGRSGTAYSLVAPDEAPYLLDLHLFLGR 377
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A + + + G+ GK+PQ +++++ + E ++D+ +++ C+NA +Y+
Sbjct: 378 PMQFASAASQAP---ESGLCGKVPQMVIDEEAEMLRVLHEQNSDLXXMERVCSNAMIQYL 434
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
KSRP S ES K++K+ + HP+FR + E + +LL M ++PPST+ E G
Sbjct: 435 KSRPPPSSESAKRMKQFLKEDIAPHPVFRAKSADEDVRASLLQGMKRFKPPSTIFEIG 492
>gi|432094964|gb|ELK26372.1| ATP-dependent RNA helicase DDX54 [Myotis davidii]
Length = 829
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 148/210 (70%), Gaps = 3/210 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 291 QTVVFVATKHHAEYLSELLTTQRVSCAHIYSALDQTARKINLAKFTHGKCSTLIVTDLAA 350
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN++FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 351 RGLDIPLLDNVINFSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 410
Query: 121 KPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + G + DG+ G++PQ +++D+ + N +E ++ G+ + +NA ++
Sbjct: 411 SLTLARPHEEPSGAV-GVDGVLGRVPQSVVDDEDCGLRNTLEASLELRGLSRVADNAQQQ 469
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLF 208
YV+SRP S ES+K+ KEL+LA + +HPLF
Sbjct: 470 YVRSRPAPSPESIKRAKELDLAGLGLHPLF 499
>gi|126324487|ref|XP_001378612.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Monodelphis domestica]
Length = 895
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 160/239 (66%), Gaps = 4/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+ EY+ ++L G+ T+IYS LD TARKIN A+F GK L+VTDVAA
Sbjct: 368 QTVVFVATKHEAEYLTELLTAQGVGCTHIYSALDQTARKINLARFVHGKCSALIVTDVAA 427
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N+NFP K+KLF+HRVGR ARAGRSG AYSLV+ DE+ Y DL LFL R
Sbjct: 428 RGLDIPLLDNVVNFNFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEVPYVFDLHLFLDR 487
Query: 121 KPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA +D G DGM G++P+ +++D+ ++ + ++++ +++ NA+K+
Sbjct: 488 PLALAAPNDKPSGNA-AADGMLGRVPRSVVDDEECRLITDHDASSELQSLRRVAENAHKQ 546
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRPG S ES+K+ K+L+ + +HPLF + E E+ L+ + YR +T+ E
Sbjct: 547 YVRSRPGPSPESIKRAKDLDPTLLGLHPLFSSRFEDDELERMKLVDSIKNYRARATIFE 605
>gi|27545287|ref|NP_775375.1| ATP-dependent RNA helicase DDX54 [Danio rerio]
gi|20977591|gb|AAM28223.1| ATP-dependent RNA helicase [Danio rerio]
Length = 862
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+HVEY+ ++L G+ + IYS LD TARKI+ +F K+ +L+VTDVAA
Sbjct: 322 QTVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAA 381
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINYNFPCK KLF+HRVGR ARAGR G AYSLV DE+ Y DL LFLGR
Sbjct: 382 RGIDIPLLDNVINYNFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHLFLGR 441
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
LA + DG+FG++PQ +++D+ +++ + D++ +++ NAYK+Y+
Sbjct: 442 PMQLAHPEH---TQEADGVFGRVPQSVLDDEECQLITAHQNSLDLQNLRRVSENAYKQYL 498
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
KSRP S ES+K+ + +L M VHPL + E ++ ++ + Y+ ST+ E
Sbjct: 499 KSRPVPSAESIKRSRNTQLTDMAVHPLLGCGLEKMELDRLLMVDTIKGYKAKSTIFEI 556
>gi|301779842|ref|XP_002925338.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Ailuropoda
melanoleuca]
Length = 863
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 158/238 (66%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S T+IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 327 QTVVFVATKHHAEYLSELLTTQGVSCTHIYSALDQTARKINLAKFTHGKCSTLIVTDLAA 386
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 387 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 446
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
A DG+ G++PQ +++D+ + + + ++ G+ + +NA ++Y
Sbjct: 447 ALTPAPPHEGSSGAGGADGVLGRVPQSVVDDEEGGLRSTLAAVLELRGLGRVADNAQQQY 506
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 507 VRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEKELQRLKLVDSIKSYRSRATIFE 564
>gi|281343478|gb|EFB19062.1| hypothetical protein PANDA_014817 [Ailuropoda melanoleuca]
Length = 819
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 158/238 (66%), Gaps = 2/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S T+IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 283 QTVVFVATKHHAEYLSELLTTQGVSCTHIYSALDQTARKINLAKFTHGKCSTLIVTDLAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 343 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 402
Query: 121 KPVLADD-SMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
A DG+ G++PQ +++D+ + + + ++ G+ + +NA ++Y
Sbjct: 403 ALTPAPPHEGSSGAGGADGVLGRVPQSVVDDEEGGLRSTLAAVLELRGLGRVADNAQQQY 462
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 463 VRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFEEKELQRLKLVDSIKSYRSRATIFE 520
>gi|115762569|ref|XP_792708.2| PREDICTED: ATP-dependent RNA helicase DDX54-like
[Strongylocentrotus purpuratus]
Length = 889
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 157/238 (65%), Gaps = 1/238 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVF AT++HV+YV ++L AGIS+TYIYS LD ARKIN AKF K +L+VTD+AA
Sbjct: 317 LTVVFLATRHHVDYVRELLEQAGISNTYIYSALDQAARKINVAKFTHKKTHILLVTDIAA 376
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN++FP K KLFVHRVGR ARAGR+G AYS+V+ DEL Y +DL LFLG+
Sbjct: 377 RGIDIPMLDVVINFHFPGKPKLFVHRVGRVARAGRTGTAYSMVAPDELSYLIDLHLFLGK 436
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ K G G++PQ +++D+ S + N ++ +D+ +++ NA K Y+
Sbjct: 437 DIAFFKNDDKTSEEDVSGKLGRVPQSVVDDEESVLRNLHKMSSDLTNLKRPAFNAMKNYL 496
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+SRP S SVK+ KE++ + HP++ E + L+ ++ Y+P +T+ E
Sbjct: 497 RSRPLPSPASVKRSKEIDPMDIAYHPMYGIQDSDLESTRVQLVDEVKGYKPRATIFEI 554
>gi|326435254|gb|EGD80824.1| hypothetical protein PTSG_11725 [Salpingoeca sp. ATCC 50818]
Length = 818
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 154/239 (64%), Gaps = 3/239 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVF +TK+ +EY+ +L I TY Y +LDPTARKIN AKF+ GK+++L+VTDVAA
Sbjct: 280 LTVVFVSTKHLIEYLKVLLEALQIPCTYSYGNLDPTARKINIAKFRAGKVKLLLVTDVAA 339
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD V+NY+FP + KLFVHRVGR ARAGRSG AYSLV+ DE+ + +DL FLGR
Sbjct: 340 RGIDIPMLDYVVNYDFPRRPKLFVHRVGRVARAGRSGTAYSLVAVDEVAHLIDLHTFLGR 399
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P A ++ QDG+FG+ PQ L+++ + +D++ + N YK+Y
Sbjct: 400 -PFAA--AISTTPADQDGVFGRFPQALIDEYRELVHTTHRTHSDLDSLFHVVENGYKQYD 456
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGK 239
KSRP + SVK+ K+LE VHP+ R+ S + + + + +RP TV E K
Sbjct: 457 KSRPDPAQASVKRAKQLEEVGYHVHPMLRDTSSDAIARDDFIKSIRNFRPSLTVFEVNK 515
>gi|66800711|ref|XP_629281.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
gi|74996456|sp|Q54CD8.1|DDX54_DICDI RecName: Full=ATP-dependent RNA helicase ddx54; AltName:
Full=ATP-dependent RNA helicase helA; AltName: Full=DEAD
box protein 54
gi|60462646|gb|EAL60848.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
Length = 1091
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE++H +L AGI+STYI+ LDP ARKIN AKF++ ++ V+VVTD+AAR
Sbjct: 500 TIIFVSTKYHVEFIHILLERAGIASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAAR 559
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+F+HRVGR ARAGRSG+AYSLVS DE+ Y +DL L+LGRK
Sbjct: 560 GIDIPLLDNVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVSPDEVPYMIDLHLYLGRK 619
Query: 122 PVLADDSMKGKIRHQD--GMFGKIPQGLMEDQISEIMNWVELDA-DMEGIQKTCNNAYKK 178
L +G+ + +G IPQ ++ D+ +E +N + ++ + KT +NA+KK
Sbjct: 620 -FLNKFQYEGQTINDPKYSFYGTIPQTII-DRETEFVNVQRKECIELLSLTKTIHNAHKK 677
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
Y+ +RPGAS ES ++ K ++ + + HP+ + + S +Q + + + + +RPP TVLE
Sbjct: 678 YLSTRPGASHESNRRAKLMDKS--KYHPMLSDHLNSNDQIRNDFIQSLKSFRPPQTVLEL 735
>gi|340384313|ref|XP_003390658.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Amphimedon
queenslandica]
Length = 708
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 155/236 (65%), Gaps = 6/236 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+V+F ATK+HVEY+ +IL AGI S+Y+Y LD TARKI+ KF K VL+VTD+AAR
Sbjct: 224 SVIFVATKHHVEYLKEILSSAGIDSSYVYGSLDQTARKISIGKFLYKKTNVLLVTDIAAR 283
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINY+FP KAKLFVHRVGR ARAGR+G AYSLVS DE Y +DL LFLGR
Sbjct: 284 GIDIPLLDNVINYHFPSKAKLFVHRVGRVARAGRTGTAYSLVSPDEGAYVVDLHLFLGRN 343
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ + K DG++G +P +ED+ ++ + ++ ++K N K Y+K
Sbjct: 344 IITESRASK----ESDGVYGSVPHIAIEDEDELLIKLHNNNEELVSLRKVAENGMKHYIK 399
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SR +S ES+++ KEL ++ HPLF + +A+ E+ LL+ + Y+P T+ E
Sbjct: 400 SRNLSSPESIRRAKELA-NSLHPHPLFGSHCLTAQVERGELLSALKTYKPSQTIFE 454
>gi|340377875|ref|XP_003387454.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Amphimedon queenslandica]
Length = 1183
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 155/236 (65%), Gaps = 6/236 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VVF ATK+HVEY+ +IL AGI S+Y+Y LD TARKI+ KF K VL+VTD+AAR
Sbjct: 295 SVVFVATKHHVEYLKEILSSAGIDSSYVYGSLDQTARKISIGKFLYKKTNVLLVTDIAAR 354
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINY+FP KAKLFVHRVGR ARAGR+G AYSLVS DE Y +DL LFLGR
Sbjct: 355 GIDIPLLDNVINYHFPSKAKLFVHRVGRVARAGRAGTAYSLVSPDEGAYVVDLHLFLGRN 414
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ S K DG++G +P +ED+ ++ + ++ ++K N K Y+K
Sbjct: 415 IITESHSSK----ESDGVYGSVPHIAIEDEDELLIKLHNNNEELVSLRKVAENGMKHYIK 470
Query: 182 SRPGASVESVKKVKELELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
SR +S ES+++ KEL ++ HPLF + +++ E+ LL+ + Y+P T+ E
Sbjct: 471 SRNLSSPESIRRAKEL-ATSLHPHPLFGSHCLTSQVERGELLSALKTYKPLQTIFE 525
>gi|330812848|ref|XP_003291329.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
gi|325078509|gb|EGC32157.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
Length = 1031
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 158/239 (66%), Gaps = 8/239 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATKYHVE++H +L GI+STYI+ LDP ARKIN AKF+T ++ +L+VTD+AAR
Sbjct: 468 TIIFTATKYHVEFIHILLERTGITSTYIHGYLDPVARKINLAKFRTNQVSILIVTDLAAR 527
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+FVHRVGR ARAG+ G+AYSLVS DE+ Y +DL L+LGRK
Sbjct: 528 GIDIPLLDNVINFDFPPKEKIFVHRVGRVARAGKKGIAYSLVSPDEVPYMIDLHLYLGRK 587
Query: 122 PVLADDSMKGKIRHQD--GMFGKIPQGLMEDQISEIMNWVELD-ADMEGIQKTCNNAYKK 178
L +G+ +G IPQ L+ D +E +N + + ++ + +T NA+KK
Sbjct: 588 -FLNKFEFEGQTVEDPKYSFYGTIPQYLI-DAETEYVNIQKKECVELLSLTRTIENAHKK 645
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLE 236
Y+ RPGAS ES + K L HP+ I + K + + ++ +RPP TVLE
Sbjct: 646 YISMRPGASHESNNRAKALNKTGF--HPILSGKISDNDNIKMDFIQQLKSFRPPQTVLE 702
>gi|449675652|ref|XP_002156296.2| PREDICTED: ATP-dependent RNA helicase DDX54-like [Hydra
magnipapillata]
Length = 802
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 154/239 (64%), Gaps = 8/239 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ ++L AGI+ +YIYS LD TARKIN AKFQ +VL+VTD+AAR
Sbjct: 344 TIIFVATKHHVEYLQQLLTHAGINCSYIYSSLDQTARKINLAKFQKKITKVLIVTDIAAR 403
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K KLFVHRVGR ARAGR+G+AYS V DE+ + LDL LFL +
Sbjct: 404 GIDIPMLDNVINFDFPSKPKLFVHRVGRVARAGRTGMAYSFVQKDEMAFLLDLHLFLTQP 463
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++++ + +G+ G + Q + I N +++ ++ + N YK+Y+K
Sbjct: 464 IKFSNENS----QEDNGLIGSVSQSAIVPHQDFINNTTAVNSTLQSMYTVMLNGYKQYIK 519
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ----EKFNLLTKMSEYRPPSTVLE 236
SR ASV S+K+ KE+ A + +HP+F +E E LL + +++P TV E
Sbjct: 520 SRENASVASIKRSKEINYALISIHPIFNKKSGSEPSEAVELNKLLLDLQKFKPKLTVFE 578
>gi|426247766|ref|XP_004017647.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Ovis aries]
Length = 864
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 152/237 (64%), Gaps = 13/237 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN A+F GK L+VTD+AA
Sbjct: 340 QTVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAA 399
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 400 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 459
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
LA R + G+ PQ + + +E ++ G+ + +NA ++YV
Sbjct: 460 ALTLA--------RPPEEPSGEDPQTIH----CGLRTSLEASLELRGLSRVADNAQQQYV 507
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
+SRP S ES+K+ K L+LA + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 508 RSRPAPSPESIKRAKGLDLAGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFE 564
>gi|431914219|gb|ELK15477.1| ATP-dependent RNA helicase DDX54 [Pteropus alecto]
Length = 942
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 161/264 (60%), Gaps = 28/264 (10%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L +S +IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 382 QTVVFVATKHHAEYLSELLTAQRVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAA 441
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHR------------------------VGRCARAGRS 96
RG+DIP LD VINY+FP K KLF+HR VGR ARAGRS
Sbjct: 442 RGLDIPLLDNVINYSFPAKGKLFLHRVEPCVGSCTLVQVTLVAVSAPSPFVGRVARAGRS 501
Query: 97 GVAYSLVSSDELCYYLDLLLFLGRKPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISE 154
G AYSLV+ DE+ Y LDL LFLGR LA + G + DG+ G++PQ +++D+
Sbjct: 502 GTAYSLVAPDEVPYLLDLHLFLGRALTLACPNKEPLGAV-GGDGVLGRVPQSVVDDEDCG 560
Query: 155 IMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGS 213
+ + +E ++ G+ + +NA ++YV+SRP S ES+ + KEL+LA + +HPLF + +
Sbjct: 561 LRSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIARAKELDLAGLGLHPLFSSRLEE 620
Query: 214 AEQEKFNLLTKMSEYRPPSTVLEF 237
E ++ L+ + YR +T+ E
Sbjct: 621 KELQRLRLVDGIRNYRSRATIFEI 644
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 158/249 (63%), Gaps = 20/249 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATKYHVEY+ L A I ST I+ LDP ARKIN AKF++ + V++VTD+AAR
Sbjct: 502 TIIFTATKYHVEYLQIFLKQAKIDSTIIHGYLDPVARKINLAKFRSNNVSVMIVTDIAAR 561
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+FVHRVGR ARAGR G AYSLVS DE+ Y +DL L+L RK
Sbjct: 562 GIDIPLLDNVINFDFPPKEKIFVHRVGRVARAGRKGTAYSLVSPDEIPYMIDLHLYLARK 621
Query: 122 PV-------LADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELD-ADMEGIQKTCN 173
+ L D S+ ++G IPQ ++ D+ +E + + + ++ + T N
Sbjct: 622 IINKAEPAQLEDTSI--------SLYGNIPQHII-DRENEFVKIQKAECVELASLNNTIN 672
Query: 174 NAYKKYVKSRPGASVESVKKVKELELATMQVHP-LFRNIGSAEQEKFNLLTKMSEYRPPS 232
NAYKK+V++RPGAS ES + KEL + +HP L + +E ++ + + +RPP
Sbjct: 673 NAYKKFVRTRPGASHESNNRAKELNKSY--IHPSLLGRLDQSEMDRNAFVQSLKAFRPPQ 730
Query: 233 TVLEFGKAR 241
TV E R
Sbjct: 731 TVFELEMKR 739
>gi|302758696|ref|XP_002962771.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
gi|300169632|gb|EFJ36234.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
Length = 786
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 152/248 (61%), Gaps = 14/248 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF +TK+HVE++ ++L GI +Y +D TARKIN AKF+ K +L+VTDVAA
Sbjct: 269 QTVVFVSTKHHVEFLFEVLKSEGIDLAVVYGAMDQTARKINVAKFRARKTMILLVTDVAA 328
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD V+N++FP K KLFVHRVGR ARAGR+G AYS ++SDEL Y LDL LFL +
Sbjct: 329 RGIDIPLLDNVVNFDFPAKPKLFVHRVGRAARAGRTGTAYSFLTSDELPYLLDLHLFLSK 388
Query: 121 --KPVLADDSM----------KGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGI 168
+P ++ + + + D ++G+ PQ +++ + + ++ D+ +
Sbjct: 389 PVRPAPTEEDIVSSPGLLSETEEAVSRGDTVYGRFPQLVLDTTMERVRESIDQSTDILAL 448
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEY 228
QK C+NAY+ Y K+RP S ES K+VK LA +HPLFR ++ +
Sbjct: 449 QKACSNAYRLYSKTRPTPSPESCKRVK--TLAKEGLHPLFRKKAGTADAAAAFAERLKNF 506
Query: 229 RPPSTVLE 236
+P TVLE
Sbjct: 507 KPKQTVLE 514
>gi|391345925|ref|XP_003747233.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Metaseiulus
occidentalis]
Length = 805
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 153/238 (64%), Gaps = 4/238 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVF TK+HVEY+ +IL GIS +YS LD AR + F++ +++L+VTDVAA
Sbjct: 301 LTVVFVPTKHHVEYIREILEKIGISCGCVYSSLDQVARTVAVNAFKSKSLKILLVTDVAA 360
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD V+N++FP K KLFVHRVGR ARAGR G AYS VS+DE Y LDL LFL R
Sbjct: 361 RGIDIPLLDNVVNFSFPAKPKLFVHRVGRVARAGRFGTAYSFVSADEASYLLDLHLFLDR 420
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
K + +M + +D + G +PQ +++++ + + L D+ +QK C NA +Y
Sbjct: 421 KLTFPEPNM---AQDEDRILGSVPQSIIDEERANLDKLHSLSVDISNLQKVCANAMIQYR 477
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
K+RP +S ES +++K L ++ HP+F S + + ++L+ +++P +T+ E G
Sbjct: 478 KARPNSSAESNRRMKALLKGSVPTHPMFAK-DSTDVAREDMLSAFKKFKPNATIFEIG 534
>gi|195170534|ref|XP_002026067.1| GL16100 [Drosophila persimilis]
gi|194110947|gb|EDW32990.1| GL16100 [Drosophila persimilis]
Length = 854
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 156/263 (59%), Gaps = 36/263 (13%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + ILG AGIS+T +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISFILGEAGISNTSVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDYVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D S G IPQ L+E++ + N ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDSS----------TMGTIPQDLLEEEHLSV-NEIKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVESVKKVKELELATMQVHPLF---------------------RNIGSAE---- 215
SRP AS ++ +VK+++ ++ F + +AE
Sbjct: 452 SSRPVASTDANARVKKIKFYALKPLEDFFTAAPALAQAAEVNGQSSESREEVAAAERKLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG 238
++K ++L KM +RP TV E
Sbjct: 512 EDKHDILVKMRNFRPCGTVFELN 534
>gi|198462641|ref|XP_001352498.2| GA16838 [Drosophila pseudoobscura pseudoobscura]
gi|198150914|gb|EAL29995.2| GA16838 [Drosophila pseudoobscura pseudoobscura]
Length = 852
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 156/263 (59%), Gaps = 36/263 (13%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + ILG AGIS+T +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISFILGEAGISNTSVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDYVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D S G IPQ L+E++ + N ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDSS----------TMGTIPQDLLEEEHLSV-NEIKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVESVKKVKELELATMQVHPLF---------------------RNIGSAE---- 215
SRP AS ++ +VK+++ ++ F + +AE
Sbjct: 452 SSRPVASTDANARVKKIKFYALKPLEDFFTADPALAQAAEVNGQSSESREEVAAAERKLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG 238
++K ++L KM +RP TV E
Sbjct: 512 EDKHDILVKMRNFRPCGTVFELN 534
>gi|344295386|ref|XP_003419393.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Loxodonta africana]
Length = 926
Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats.
Identities = 104/222 (46%), Positives = 147/222 (66%), Gaps = 2/222 (0%)
Query: 17 KILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNF 76
++L +S +IYS LD TARKIN AKF GK L+VTD+AARG+DIP LD VINY+F
Sbjct: 399 QLLTTQRVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDNVINYSF 458
Query: 77 PCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLADDSMK-GKIRH 135
P K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR LA + +
Sbjct: 459 PAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPHEEPSDVAR 518
Query: 136 QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVK 195
DG+ G++PQ +++D+ + + + ++ G+ + +NA ++YV+SRP S ES+K+ K
Sbjct: 519 VDGVLGRVPQSVVDDEDCSLQSTLVASLELRGLGRVADNAQQQYVRSRPAPSPESIKRAK 578
Query: 196 ELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
L+LA + +HPLF + G E + L+ + +YR +T+ E
Sbjct: 579 ALDLAGLGLHPLFSSRFGEQELLRLRLVDSIKKYRSRATIFE 620
>gi|195336302|ref|XP_002034780.1| GM14284 [Drosophila sechellia]
gi|194127873|gb|EDW49916.1| GM14284 [Drosophila sechellia]
Length = 827
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 160/277 (57%), Gaps = 46/277 (16%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+ +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQ---ISEIMNWVELDADMEGIQKTCNNAYK 177
+ D S G IPQ L+E++ +++I N + G+ +T NAYK
Sbjct: 403 PFNIHDSS----------ALGTIPQDLLEEEHLTVTDIKN----SHHIAGVLRTSENAYK 448
Query: 178 KYVKSRPGASVES---VKKVKELELATMQ----VHPLFRNIGSA---------------- 214
KY+ SRP AS ++ VKK+K L ++ P+ A
Sbjct: 449 KYLSSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSATER 508
Query: 215 --EQEKFNLLTKMSEYRPPSTVLEFG----KARFIII 245
++EK ++L KM +RP TV E +FI++
Sbjct: 509 KLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVM 545
>gi|194864582|ref|XP_001971010.1| GG14669 [Drosophila erecta]
gi|190652793|gb|EDV50036.1| GG14669 [Drosophila erecta]
Length = 827
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 161/274 (58%), Gaps = 40/274 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS++ +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISYILTEAGISNSSVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D+S G IPQ L+E++ + + ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDNS----------ALGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVES---VKKVKELELATMQ----VHPLFRNIGSA------------------E 215
SRP AS ++ VKK+K L ++ P+ A +
Sbjct: 452 SSRPVASTDANARVKKIKFFALKPLEDFFIAAPVLAQAAQASGQSTESQAEVSATERKLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG----KARFIII 245
++K ++L KM +RP TV E +FI++
Sbjct: 512 EQKHDILVKMRSFRPGGTVFELNTTQKSTQFIVM 545
>gi|28575014|ref|NP_612028.4| CG32344 [Drosophila melanogaster]
gi|18447311|gb|AAL68229.1| LD28101p [Drosophila melanogaster]
gi|23092697|gb|AAN11439.1| CG32344 [Drosophila melanogaster]
gi|220947558|gb|ACL86322.1| CG32344-PA [synthetic construct]
Length = 827
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 159/274 (58%), Gaps = 40/274 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+ +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D S G IPQ L+E++ + + ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDSS----------ALGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVES---VKKVKELELATMQ----VHPLFRNIGSA------------------E 215
SRP AS ++ VKK+K L ++ P+ A +
Sbjct: 452 SSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG----KARFIII 245
+EK ++L KM +RP TV E +FI++
Sbjct: 512 EEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVM 545
>gi|195583246|ref|XP_002081434.1| GD25714 [Drosophila simulans]
gi|194193443|gb|EDX07019.1| GD25714 [Drosophila simulans]
Length = 827
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 159/274 (58%), Gaps = 40/274 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+ +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D S G IPQ L+E++ + + ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDSS----------ALGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVES---VKKVKELELATMQ----VHPLFRNIGSA------------------E 215
SRP AS ++ VKK+K L ++ P+ A +
Sbjct: 452 SSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSATERRLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG----KARFIII 245
+EK ++L KM +RP TV E +FI++
Sbjct: 512 EEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVM 545
>gi|195108365|ref|XP_001998763.1| GI24146 [Drosophila mojavensis]
gi|193915357|gb|EDW14224.1| GI24146 [Drosophila mojavensis]
Length = 829
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 153/265 (57%), Gaps = 38/265 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+T +YS LDP ARKIN AKF + K+ VL+VTDVAA
Sbjct: 282 QTVVFAGTQHHVELISFILTQAGISNTSVYSSLDPAARKINTAKFASKKVSVLIVTDVAA 341
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 342 RGIDIPSLDYVVNLHFPGVPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 401
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D+S G IPQ L+E++ + N ++ + G+ +T NAYKKY+
Sbjct: 402 PFNINDNS----------SIGTIPQDLLEEEYLTV-NEIKKSHHIAGVLRTSENAYKKYL 450
Query: 181 KSRPGASVES---VKKVKELELATMQ----VHPLFRNIG--------------------S 213
SRP AS ++ KK+K L T++ P+
Sbjct: 451 SSRPTASTDANARAKKIKFFALKTLEDFFNAAPVLEQAAKISGQKLDDESRADVAECERK 510
Query: 214 AEQEKFNLLTKMSEYRPPSTVLEFG 238
E EK ++L KM +RP T+ E
Sbjct: 511 LENEKHDILVKMRNFRPSGTIFELN 535
>gi|410976686|ref|XP_003994747.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Felis catus]
Length = 866
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 159/255 (62%), Gaps = 27/255 (10%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF GK L+VTD+AA
Sbjct: 320 QTVVFVATKHHAEYLSELLTTQGVSCAHIYSALDQTARKINLAKFTHGKCSTLIVTDLAA 379
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 380 RGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGR 439
Query: 121 KPVLADDSMKGKIRHQDG------MFGKIP---QGLMED-QISEIMNWVE------LDAD 164
LA R +G F +P + + E ++E + + L A
Sbjct: 440 ALTLA--------RPHEGPSAFTPHFSCVPSCWRYMFETLHLTEFLGQSQGGLRSALSAS 491
Query: 165 ME--GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNL 221
+E G+ + +NA ++YV+SRP S ES+K+ KEL++A + +HPLF + E+ ++ +
Sbjct: 492 LELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDVAGLGLHPLFSSRFEEEELQRLRM 551
Query: 222 LTKMSEYRPPSTVLE 236
+ + YR +T+ E
Sbjct: 552 VDTIKRYRSRATIFE 566
>gi|194747377|ref|XP_001956128.1| GF25051 [Drosophila ananassae]
gi|190623410|gb|EDV38934.1| GF25051 [Drosophila ananassae]
Length = 826
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 155/263 (58%), Gaps = 36/263 (13%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+T +YS LDP ARKIN AKF + K+ VL+VTDVAA
Sbjct: 282 QTVVFAGTQHHVELISYILTGAGISNTSVYSSLDPAARKINTAKFVSKKVSVLIVTDVAA 341
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 342 RGIDIPSLDYVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 401
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P +DS G IPQ L+E++ + ++ + G+ +T NAYKKY+
Sbjct: 402 -PFNINDST---------AMGTIPQDLLEEEHLTVTE-IKKSHHIAGVLRTSENAYKKYL 450
Query: 181 KSRPGASVESVKKVKELELATM---------------------QVHPLFRNIGSAE---- 215
SRP AS ++ +VK+++ + Q + +AE
Sbjct: 451 SSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEVNGQTQETQSAVAAAERKLQ 510
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG 238
+EK ++L KM +RP TV E
Sbjct: 511 EEKHDILVKMRNFRPGGTVFELN 533
>gi|168065191|ref|XP_001784538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663919|gb|EDQ50659.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 158/251 (62%), Gaps = 20/251 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVE+++++L GI + +Y +D ARKI+ AKF+ GK ++L+VTDVAAR
Sbjct: 253 TIVFVATKHHVEFLYELLKTEGIDISVVYGSMDQAARKIHIAKFRAGKTKLLLVTDVAAR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG-- 119
GIDIP LD VINY+FP K KLFVHRVGR ARAGR+G +YS V+S+E+ Y LDL L+L
Sbjct: 313 GIDIPLLDNVINYDFPPKPKLFVHRVGRAARAGRTGTSYSFVTSEEMPYVLDLHLYLSKG 372
Query: 120 -------------RKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADME 166
R+ V+AD ++ + + +FG++PQ +++ + + + + D+
Sbjct: 373 IRPAPLEEAIVADREKVMAD--LEAASKRGETIFGRMPQSVLDFGMDRLREVISNNDDLI 430
Query: 167 GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKM 225
G+QK NAYK YVK+RP A++ES K+ K A +HP R + + E E ++
Sbjct: 431 GLQKAAKNAYKLYVKTRPPAALESAKRAK--GFAREGLHPSLRQQLRNVEAEVAAFTERL 488
Query: 226 SEYRPPSTVLE 236
RP TVLE
Sbjct: 489 KAIRPRQTVLE 499
>gi|47223591|emb|CAF99200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 532
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 129/197 (65%), Gaps = 5/197 (2%)
Query: 17 KILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNF 76
K+L G+ YIYS LD TARKIN KF K VL+VTDVAARGIDIP LD VINYNF
Sbjct: 253 KLLTSEGVECAYIYSSLDQTARKINIGKFVHRKAMVLLVTDVAARGIDIPLLDNVINYNF 312
Query: 77 PCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK-----PVLADDSMKG 131
P KAKLF+HRVGR RAGRSG AYS++ DE+ + DL LFLGR P D
Sbjct: 313 PSKAKLFLHRVGRVGRAGRSGTAYSMICQDEMPFVFDLHLFLGRPVQFATPEHTKDPFPP 372
Query: 132 KIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESV 191
DG+FG++PQ +++D+ S ++ E D++ + + NAYK+Y+KSRP S ES+
Sbjct: 373 FPSDSDGVFGRVPQSILDDESSHLVMAHENSLDLQNLHRVSENAYKQYLKSRPNPSTESI 432
Query: 192 KKVKELELATMQVHPLF 208
++VK + ++M VHPL
Sbjct: 433 RRVKSTDASSMAVHPLL 449
>gi|367022384|ref|XP_003660477.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
gi|347007744|gb|AEO55232.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
Length = 926
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 157/240 (65%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ ++L AG S +Y+Y LD TARKI F+ GK +LVVTDVAAR
Sbjct: 370 TIIFAATKHHVEYLSQLLRHAGFSVSYVYGSLDQTARKIQVEIFRRGKSNILVVTDVAAR 429
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AY+LV +L Y LDL LFLGR+
Sbjct: 430 GIDIPVLANVINYDFPPQPKIFVHRVGRTARAGQRGWAYALVRESDLPYLLDLQLFLGRR 489
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ + +K QD + G + + +ED + + + + D+ ++K A K Y+K
Sbjct: 490 LVVGQE-VKEPSYAQDVVIGTLIRAELEDNVEWVKKVLGDEDDISALKKVTIKAEKLYMK 548
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SVK+ +E+ + Q+HPLF + SAE+ + +LL+K+S ++P T+ E G
Sbjct: 549 TRNSASSQSVKRAREIIASKSWTQLHPLFGESAASAEEARDSLLSKISSFKPQETIFEIG 608
>gi|320163598|gb|EFW40497.1| ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1198
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 151/250 (60%), Gaps = 14/250 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
++VF AT++HVE++ IL G+S IY +D ARKIN AKF+ K V+VVTDVAA
Sbjct: 502 QSIVFVATRHHVEFISLILTSFGLSVASIYGSMDQAARKINLAKFRLNKASVMVVTDVAA 561
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+FP K KLF+HRVGR ARAGR+GVAYSLV DEL Y LDL LFLGR
Sbjct: 562 RGIDIPLLNNVINYDFPAKPKLFIHRVGRAARAGRTGVAYSLVQPDELPYVLDLHLFLGR 621
Query: 121 KPVLADDSMK--------GK-----IRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEG 167
VL+ + G+ I + + G IP L+ D + E + D++
Sbjct: 622 PLVLSTGERRTVSGATPSGQKILPGISPDETVLGSIPNVLLADAVEESKQKIAASFDIQS 681
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMS 226
+ + NAY+ Y KSRP + ESV + K++ T+ HP F N + AE + +L ++
Sbjct: 682 LVRVVTNAYQLYSKSRPLPAAESVGRAKDMMSGTIPPHPCFLNEMDDAEIARSTVLDQLH 741
Query: 227 EYRPPSTVLE 236
++P T+ E
Sbjct: 742 SFKPRGTIFE 751
>gi|68533609|gb|AAH98602.1| Zgc:111908 protein [Danio rerio]
Length = 511
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 150/240 (62%), Gaps = 12/240 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ ++L G+ + IYS LD TARKI+ F K+ +L+VTDVAAR
Sbjct: 175 TVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGGFVHRKVMLLLVTDVAAR 234
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINYNFPCK KLF+HRVGR ARAGR G AYSLV DE+ Y DL FLGR
Sbjct: 235 GIDIPLLDNVINYNFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHRFLGRP 294
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA + DG+FG++PQ +++D+ +++ + D++ +++ NAYK+Y+K
Sbjct: 295 MQLAHPE---HTQEADGVFGRVPQSVLDDEECQLITAHQNSLDLQNLRRVSENAYKQYLK 351
Query: 182 SRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFGKA 240
S+K+ + +L M VHPL + E ++ ++ + Y+ ST+ E +
Sbjct: 352 --------SIKRSRNTQLTDMAVHPLLGCGLEKMELDRLLMVDTIKGYKAKSTIFEINSS 403
>gi|195490088|ref|XP_002092996.1| GE21030 [Drosophila yakuba]
gi|194179097|gb|EDW92708.1| GE21030 [Drosophila yakuba]
Length = 827
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 155/263 (58%), Gaps = 36/263 (13%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+ +YS LDP ARKIN AKF K+ VL+VTDVAA
Sbjct: 283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAA 342
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ + LDL LFL R
Sbjct: 343 RGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR 402
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+ D S G IPQ L+E++ + + ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDSSA----------LGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYL 451
Query: 181 KSRPGASVESVKKVKELELATMQVHPLF------------RNIGSAE------------- 215
SRP AS ++ +VK+++ ++ F + SAE
Sbjct: 452 SSRPVASTDANARVKKIKFFALKPLEDFFTAAPALAQAAEASGQSAESQAKVSATERKLQ 511
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG 238
+EK ++L KM +RP TV E
Sbjct: 512 EEKHDILVKMRSFRPGGTVFELN 534
>gi|195389156|ref|XP_002053243.1| GJ23450 [Drosophila virilis]
gi|194151329|gb|EDW66763.1| GJ23450 [Drosophila virilis]
Length = 829
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 152/265 (57%), Gaps = 38/265 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL AGIS+T +YS LDP ARKIN AKF + K+ VL+VTDVAA
Sbjct: 282 QTVVFAGTQHHVELISYILTQAGISNTSVYSSLDPAARKINTAKFASKKVSVLIVTDVAA 341
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 342 RGIDIPSLDYVVNLHFPGIPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 401
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P +DS G IPQ L+E++ + ++ + G+ +T NAYKKY+
Sbjct: 402 -PFNINDS---------SSIGTIPQDLLEEEYLSVAE-IKKSHHIAGVLRTSENAYKKYL 450
Query: 181 KSRPGASVES---VKKVKELELATMQ----VHPLFRNIG--------------------S 213
SRP AS ++ KK+K L +++ P+
Sbjct: 451 SSRPTASTDANARAKKIKFFALKSLEDFFDAAPVLEQAAKISGQKLDANSKAEVAESERK 510
Query: 214 AEQEKFNLLTKMSEYRPPSTVLEFG 238
E EK ++L KM +RP T+ E
Sbjct: 511 LENEKHDILVKMRNFRPSGTIFELN 535
>gi|405968650|gb|EKC33699.1| ATP-dependent RNA helicase DDX54 [Crassostrea gigas]
Length = 472
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVF ATK+HVEY+H IL AGI STYIYS LDP+ARKIN AKFQ K++VL+VTD+AA
Sbjct: 290 LTVVFAATKHHVEYLHMILTYAGIDSTYIYSSLDPSARKINVAKFQHKKVKVLIVTDLAA 349
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN NFP K+KLFVHRVGR ARAGR G AYSLV+ DE+ + LDL +FLGR
Sbjct: 350 RGIDIPLLDNVINVNFPAKSKLFVHRVGRVARAGREGYAYSLVAQDEVPFLLDLYIFLGR 409
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQK 170
+A S + +DG+ G +PQ +++++ ++ W + D+ I +
Sbjct: 410 SLTIA--SQLKNVEDKDGVLGDVPQTVVDEEEEQLRLWHKDHIDLSAISR 457
>gi|195011457|ref|XP_001983158.1| GH15746 [Drosophila grimshawi]
gi|193896640|gb|EDV95506.1| GH15746 [Drosophila grimshawi]
Length = 786
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 150/265 (56%), Gaps = 38/265 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF T++HVE + IL +GIS+T +YS LD ARKIN AKF + K+ VLVVTDVAA
Sbjct: 240 QTVVFVGTQHHVELISYILSQSGISNTSVYSSLDAAARKINTAKFASKKVSVLVVTDVAA 299
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIPSLD V+N +FP KLFVHRVGRCARAGR+G AYS+ S+D+ + LDL LFL R
Sbjct: 300 RGIDIPSLDYVVNLHFPGIPKLFVHRVGRCARAGRTGTAYSIFSTDDTAHLLDLHLFLNR 359
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P +DS G IPQ L+ED+ + ++ + G+ +T NAYKKY+
Sbjct: 360 -PFNINDS---------SSIGTIPQDLLEDEYLTVTE-IKKSHHIAGVLRTSENAYKKYL 408
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSA-------------------------- 214
SRP AS ++ + K+++ ++ F N
Sbjct: 409 SSRPTASTDANSRAKKIKFFALRALEDFFNAAPVLQQTATISGQGLNAISKADVAESERK 468
Query: 215 -EQEKFNLLTKMSEYRPPSTVLEFG 238
E EK ++L KM +RP T+ E
Sbjct: 469 LENEKHDILVKMRNFRPSGTIFELN 493
>gi|357630995|gb|EHJ78746.1| hypothetical protein KGM_20929 [Danaus plexippus]
Length = 706
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF ATK+HVEY+H IL AGISSTY YS LDP+ARKI KF K VL+VTDVAARG
Sbjct: 248 VVFAATKHHVEYLHLILNKAGISSTYAYSGLDPSARKIALGKFTNKKCSVLLVTDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+PSLD VINYNFP K KLFVHRVGR ARAGRSG A SLV ++++ + LDL LFL
Sbjct: 308 LDLPSLDTVINYNFPAKPKLFVHRVGRSARAGRSGRALSLVCAEDVAHLLDLHLFLNATL 367
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+ + G++G +P +E + +++ W +++E + C +++Y+K
Sbjct: 368 IEPSQVNECGTSCPSGVWGVVPPAALEMRHQDVLAWERNYSEIEEASRICGRGWQQYLKW 427
Query: 183 RPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
R AS E+ K+ K T+ HP + +Q L+ ++ Y P T+LE
Sbjct: 428 REAASAEANKRSKVTPRPTLP-HPFL--VDENDQTTIALVEQIKNYTPKGTILELA 480
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 158/239 (66%), Gaps = 7/239 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFTATK+HVEY+H +L A I++T+I+ +DP ARKIN AKF++ + V+VVTD+AAR
Sbjct: 513 TIVFTATKFHVEYLHILLDQARIANTFIHGQMDPVARKINLAKFRSKVVNVMVVTDLAAR 572
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++F K K+F+HRVGR ARAGR G AYSLVS DE+ Y LDL L++ +K
Sbjct: 573 GIDIPMLDNVINFDFAPKEKIFIHRVGRVARAGRKGTAYSLVSPDEIPYMLDLHLYIAKK 632
Query: 122 PVLADDSMKGKIRH--QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L + + G+ + +G IPQ +++ + + + ++ +++T NA+ KY
Sbjct: 633 --LTNKLLPGQTVEDLEYSFYGNIPQQIIDRENEFVAIKAKECVELLSLKRTIFNAHGKY 690
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
V++RPGAS ES K+ K L+ + Q HPL N I S E + + + + +RP TV E
Sbjct: 691 VRTRPGASHESNKRAKGLDKS--QYHPLMYNFINSNEAVRNDFVQSLKAFRPNQTVFEM 747
>gi|302758194|ref|XP_002962520.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
gi|300169381|gb|EFJ35983.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
Length = 821
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 151/248 (60%), Gaps = 14/248 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF +TK+HVE++ ++L GI +Y +D TARKIN AKF+ K +L+VTDVAA
Sbjct: 298 QTVVFVSTKHHVEFLFEVLKSEGIDLAVVYGAMDQTARKINVAKFRARKTMILLVTDVAA 357
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD V+N++FP K KLFVHRVGR ARAGR+G AYS ++SDEL Y LDL LFL +
Sbjct: 358 RGIDIPLLDNVVNFDFPAKPKLFVHRVGRAARAGRTGTAYSFLTSDELPYLLDLHLFLSK 417
Query: 121 --KPVLADDSM----------KGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGI 168
+P ++ + + + + ++G+ PQ +++ + + ++ D+ +
Sbjct: 418 PVRPAPTEEDIVSSPGLLSETEEAVSRGETVYGRFPQLVLDTTMERVRESIDQSTDILAL 477
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEY 228
QK C+NAY+ Y K+RP S ES K+VK LA +H LFR ++ +
Sbjct: 478 QKACSNAYRLYSKTRPTPSPESCKRVK--TLAKEGLHLLFRKKAGTADAAAAFAERLKNF 535
Query: 229 RPPSTVLE 236
+P TVLE
Sbjct: 536 KPKQTVLE 543
>gi|196009121|ref|XP_002114426.1| hypothetical protein TRIADDRAFT_58231 [Trichoplax adhaerens]
gi|190583445|gb|EDV23516.1| hypothetical protein TRIADDRAFT_58231 [Trichoplax adhaerens]
Length = 616
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F AT++H EY+ ++L A + + +Y +LD TARKI+ ++F K +L+VTDVAAR
Sbjct: 237 TLIFVATRHHAEYLKELLVAAKFAVSCVYGNLDQTARKISISQFINKKTSILLVTDVAAR 296
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ VINYNFP + KLFVHRVGR ARAGRSG AYS +++DEL Y +DL LFLGR
Sbjct: 297 GIDIPILENVINYNFPAQPKLFVHRVGRVARAGRSGTAYSFLANDELPYLIDLHLFLGRP 356
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A D+ ++G+ G IPQ +++ + + +D+ + K NAYK Y+K
Sbjct: 357 LRFAGDTTAAN-DPENGITGAIPQEIIDREEDFLQTLQIFSSDLPSLSKVALNAYKNYLK 415
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
RP S SVK+ K++ + + HP+F + ++ K LT++ + P T+ E
Sbjct: 416 CRPLPSTASVKRAKDINFSEIVAHPMFES-DESQTTKAKFLTEIKSFTPKQTIFE 469
>gi|380486597|emb|CCF38600.1| ATP-dependent RNA helicase DBP10 [Colletotrichum higginsianum]
Length = 853
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 155/246 (63%), Gaps = 12/246 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L AG + +Y+Y LD AR+IN F+ G+ +LVVTDVAAR
Sbjct: 315 TIIFAATKHHVDYLALLLTKAGYAVSYVYGSLDQEARRINTENFRNGRANILVVTDVAAR 374
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AYS+V + Y LDL LFLGR+
Sbjct: 375 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYSIVRELDTPYLLDLQLFLGRR 434
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
V+ D+ H + + + GL D+I M W+E +AD+E ++K A K
Sbjct: 435 LVVGHDTE--NFSHAEDV---VVGGLRRDKIEIQMEWMEKILKEEADIEAMRKVSTKAEK 489
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTV 234
Y+K+R AS +S K+ +EL A +HP+F +I +AEQ + ++ K+S +RP T+
Sbjct: 490 LYLKTRHSASSQSAKRARELVGTKAWHSLHPIFGADINNAEQARNEMMAKISGFRPAETI 549
Query: 235 LEFGKA 240
E G+
Sbjct: 550 FEIGRG 555
>gi|71999646|ref|NP_741347.2| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
gi|351051384|emb|CCD74206.1| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
Length = 871
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 156/244 (63%), Gaps = 9/244 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT HVEYV IL AGI +++YS LD TARK+N KF + +LVVTDVAAR
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN +FP KAKLFVHRVGR ARAGRSG A SL+++DEL Y DL +FLG+
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGKP 387
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A D K + + + + G++P ++ + + + + DM+ +++ NA KY +
Sbjct: 388 INFASD--KSEYKEDETLIGRVPDSIVSLETEFFHSIHDNNEDMQDLRQKATNAMMKYTR 445
Query: 182 SRPGASVESVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+RP S ES ++VK+ ++ T V HP + G +++ ++L K+S+Y+ +T+ E
Sbjct: 446 TRPPPSAESARRVKQ-DIRTDSVECAPHPFLKADG--DKQSNDILNKISQYKSRNTIFEM 502
Query: 238 GKAR 241
K++
Sbjct: 503 NKSQ 506
>gi|260827419|ref|XP_002608662.1| hypothetical protein BRAFLDRAFT_211958 [Branchiostoma floridae]
gi|229294014|gb|EEN64672.1| hypothetical protein BRAFLDRAFT_211958 [Branchiostoma floridae]
Length = 757
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 143/219 (65%), Gaps = 5/219 (2%)
Query: 23 GISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFPCKAKL 82
G+S + +YS LD TARKIN AKF K +V++VTD+AARGIDIP LD VINYNFPCK KL
Sbjct: 272 GLSCSAVYSSLDQTARKINIAKFTHKKTKVMLVTDIAARGIDIPMLDNVINYNFPCKPKL 331
Query: 83 FVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLA--DDSMKGKI--RHQDG 138
FVHRVGR ARAGRSG AYSLV+ DE LDL LFLGR +A D S + +I DG
Sbjct: 332 FVHRVGRVARAGRSGTAYSLVAPDETPLMLDLHLFLGRAVKVAGKDKSSEERICVPDWDG 391
Query: 139 MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELE 198
++GK+PQ +++D+ + I + E + ++ +++ Y Y+KSR S ESVK++K ++
Sbjct: 392 LYGKVPQSIIDDEDANIRVYQENNLELGNLKRVSEWGYSAYLKSRSAPSHESVKRMKGMD 451
Query: 199 LATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
A M HPL N I E + + + Y+P ST+ E
Sbjct: 452 TAQMGFHPLLGNMIHEVEDKLAEFVDGVRNYKPNSTIFE 490
>gi|71999644|ref|NP_741348.2| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
gi|351051383|emb|CCD74205.1| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
Length = 825
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 156/244 (63%), Gaps = 9/244 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT HVEYV IL AGI +++YS LD TARK+N KF + +LVVTDVAAR
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN +FP KAKLFVHRVGR ARAGRSG A SL+++DEL Y DL +FLG+
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGKP 387
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A D K + + + + G++P ++ + + + + DM+ +++ NA KY +
Sbjct: 388 INFASD--KSEYKEDETLIGRVPDSIVSLETEFFHSIHDNNEDMQDLRQKATNAMMKYTR 445
Query: 182 SRPGASVESVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+RP S ES ++VK+ ++ T V HP + G +++ ++L K+S+Y+ +T+ E
Sbjct: 446 TRPPPSAESARRVKQ-DIRTDSVECAPHPFLKADG--DKQSNDILNKISQYKSRNTIFEM 502
Query: 238 GKAR 241
K++
Sbjct: 503 NKSQ 506
>gi|398392503|ref|XP_003849711.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
gi|339469588|gb|EGP84687.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
Length = 833
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 155/250 (62%), Gaps = 20/250 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F ATK+HV+Y+ L G +++Y+Y LD TARK+ F+TG +LVVTDVAAR
Sbjct: 277 TVIFAATKHHVDYLANFLKAYGYATSYVYGSLDQTARKMQVLDFRTGMTNILVVTDVAAR 336
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV+ ++ Y LDL LFL RK
Sbjct: 337 GLDIPILANVINYDFPSQPKIFVHRVGRTARAGKEGWSYSLVTGQDMPYLLDLQLFLSRK 396
Query: 122 PVLADDSMKGKIRHQDGMF------GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
++ GK+ + GMF G +P+ ME E + +E D D+ +++
Sbjct: 397 LIV------GKVEKEPGMFSNNIVVGAMPRDKMERYCEEALKLLEEDDDLTAMREVAGKG 450
Query: 176 YKKYVKSRPGASVESVKKVKEL----ELATMQVHPLFRN--IGSAEQEKFNLLTKMSEYR 229
K+Y+++R AS ESVK+ K + + A V LF + S EQ++ ++L ++S +R
Sbjct: 451 EKQYLRTRNSASAESVKRTKSILHTEDSAATNV--LFDDGQDASLEQQRLDMLARVSGFR 508
Query: 230 PPSTVLEFGK 239
P TV EFG+
Sbjct: 509 PNETVFEFGQ 518
>gi|195429198|ref|XP_002062651.1| GK17652 [Drosophila willistoni]
gi|194158736|gb|EDW73637.1| GK17652 [Drosophila willistoni]
Length = 782
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 156/263 (59%), Gaps = 37/263 (14%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF T++HVE + IL + IS+T +YS LDP ARKIN AKF + K+ VL+VTDVAAR
Sbjct: 241 TVVFAGTQHHVELISFILTQSNISNTSVYSSLDPAARKINTAKFVSKKVSVLIVTDVAAR 300
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIPSLD VIN +FP K KLFVHRVGRCARAGRSG A+S+ S+D+ + LDL LFL R
Sbjct: 301 GIDIPSLDYVINVHFPGKPKLFVHRVGRCARAGRSGTAFSIFSTDDTAHLLDLHLFLNR- 359
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
P DD++ G +PQ L+E++ + ++ + G+ +T NAYKKY+
Sbjct: 360 PFNIDDNI---------AIGTVPQDLLEEEHLTVTE-IKKSHHIAGVLRTSENAYKKYLS 409
Query: 182 SRPGASVESVKKVKELELATMQVHPLF----------------------RNIGSAE---- 215
SRP AS ++ +VK+++ ++ F + +AE
Sbjct: 410 SRPVASTDANSRVKKIKFFALKPLEDFFHAVPVLAQAAEVSGQANETSKSEVAAAERKLQ 469
Query: 216 QEKFNLLTKMSEYRPPSTVLEFG 238
++K ++L +M +RP T+ E
Sbjct: 470 EKKHDILVQMRNFRPGGTIFELN 492
>gi|367045536|ref|XP_003653148.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
gi|347000410|gb|AEO66812.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
Length = 938
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 153/240 (63%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG S +Y+Y LD TARKI F+ G+ +LVVTDVAAR
Sbjct: 378 TIIFTATKHHVEYLSNLLRHAGFSVSYVYGSLDQTARKIQVDNFRRGRSNILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AY+LV +L Y LDL LFLGRK
Sbjct: 438 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYALVRESDLPYLLDLQLFLGRK 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL ++ + +D + G + + +E+ + + + DM +++ A K Y+K
Sbjct: 498 LVLGQETKEPSF-ARDVVVGSLMRAELENNTEWVNKLLGENEDMSAMKRVTVKAEKLYMK 556
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +E+ Q+H LF + +AE+ + +LL+K+S ++P T+ E G
Sbjct: 557 TRNSASSQSAKRAREIIASKGWTQLHALFGESAANAEEARDSLLSKISSFKPQETIFEIG 616
>gi|310795114|gb|EFQ30575.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 903
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 155/246 (63%), Gaps = 12/246 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ ++L AG + +Y+Y LD AR+IN F+ G+ +LVVTDVAAR
Sbjct: 362 TIIFAATKHHVEYLAQLLTKAGYAVSYVYGSLDQEARRINTENFRNGRANILVVTDVAAR 421
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AYS+V + Y LDL LFLGR+
Sbjct: 422 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYSIVRELDTPYLLDLQLFLGRR 481
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
V+ ++ + +D + G GL D+I M W+E + D+E ++K A K
Sbjct: 482 LVVGHET-ESPSYAEDVVVG----GLRRDKIEIHMEWMEKVLKEEVDIEAMRKVSAKAEK 536
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTV 234
Y+K+R AS +S K+ +EL +HP+F +I +AEQ + ++ K+S +RP T+
Sbjct: 537 LYLKTRHSASSQSAKRARELVGTKGWHSLHPIFGADINNAEQARNEMMAKISGFRPAETI 596
Query: 235 LEFGKA 240
E GK
Sbjct: 597 FEIGKG 602
>gi|296422662|ref|XP_002840878.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637104|emb|CAZ85069.1| unnamed protein product [Tuber melanosporum]
Length = 838
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 149/245 (60%), Gaps = 10/245 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +++ AG +Y+Y LD AR+ A+F+TG +LVVTDVAAR
Sbjct: 303 TIVFAATKHHVEYLAQLISQAGFQVSYVYGTLDQVARRNQVARFRTGDTSILVVTDVAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G AYS V +++ Y LDL LFLG+K
Sbjct: 363 GIDIPLLSNVINYDFPPQPKVFVHRVGRTARAGRRGWAYSFVRAEDAPYLLDLQLFLGKK 422
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
VL S G D I L++D + M WV + D ++ ++ K
Sbjct: 423 LVL---SKSGSAEGFDFASDIIVGSLLQDSVERCMEWVNMLLSKDTELANLKGVSAKGEK 479
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTV 234
Y K++ ASVES K+ +E+ + +PLF N +AE E+ +LT+++ +RP T+
Sbjct: 480 LYQKTKTAASVESFKRAREIVAQKGWSTTNPLFADNANNAEVERAKMLTRVTNFRPSETI 539
Query: 235 LEFGK 239
E G+
Sbjct: 540 FEIGQ 544
>gi|400596455|gb|EJP64229.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 895
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 4/242 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFTATK+HVEY+ +L AG + +++Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 359 TIVFTATKHHVEYIANLLQWAGFAVSHVYGSLDQTARRIQVEDFRHGKTNILVVTDVAAR 418
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLG++
Sbjct: 419 GIDIPVLANVINYDFPSQPKIFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGKQ 478
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ + K D + G + + +E+ + + + D+ +QK A + Y+K
Sbjct: 479 LVIGQEKEKPSY-ADDVVVGSLERNSLEEHVEWFNRVIHDNDDISALQKVSIKAERLYLK 537
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +E+ A +Q+HPLF N + E+ + ++ K+S +RP T+ E G
Sbjct: 538 TRNSASSQSAKRAREVVASGAWVQLHPLFGNDVDHDEKSRAEMMAKISGFRPNETIFEIG 597
Query: 239 KA 240
++
Sbjct: 598 RS 599
>gi|357474503|ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
gi|355508591|gb|AES89733.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
Length = 787
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 159/253 (62%), Gaps = 24/253 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + L GI + Y D+D ARK + A+F++ K +L+VTD+AAR
Sbjct: 264 TLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTMLLIVTDIAAR 323
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+FVHRVGR ARAGR+G AYS ++++++ Y LDL LFL K
Sbjct: 324 GIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLDLHLFLS-K 382
Query: 122 PVLADDSMKGKIRHQDG--------------MFGKIPQ---GLMEDQISEIMNWVELDAD 164
PV A + + +R DG ++G+ PQ L+ D++ E+ ++ A+
Sbjct: 383 PVKAAPTEEEVLRDMDGVMSRIDDEMLNGETIYGRFPQKVIDLVSDRVREV---IDTSAE 439
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLT 223
+E +Q+ C NA++ Y K++P S ES+++VK+L + HP+F + G+ E
Sbjct: 440 LEALQRACKNAFRLYSKTKPLPSKESIRRVKDLPHEGL--HPIFNKVLGTGELTAIAFSE 497
Query: 224 KMSEYRPPSTVLE 236
+ +RP T+LE
Sbjct: 498 HLKNFRPKQTILE 510
>gi|452978780|gb|EME78543.1| hypothetical protein MYCFIDRAFT_10719, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 855
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 150/250 (60%), Gaps = 18/250 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ L G +++Y+Y LD TARK+ F++G +LVVTDVAAR
Sbjct: 307 TVVFAATKHHVEYLANFLKAYGYATSYVYGSLDQTARKMQVQDFRSGITNILVVTDVAAR 366
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P L VINY+FP + K+FVHRVGR ARAGR G +YSL++ ++ Y LDL LFLGR+
Sbjct: 367 GLDVPLLANVINYDFPSQPKIFVHRVGRTARAGREGWSYSLITQQDMPYLLDLQLFLGRR 426
Query: 122 PVLADDSMKGKIRHQDGMF------GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
VL G+ + G+F G + + +E + E +E D D+ ++
Sbjct: 427 LVL------GRTEKEPGIFQNAIVLGALRRDKLEPLMEESAKLIEEDDDLSAMRDVAAKG 480
Query: 176 YKKYVKSRPGASVESVKKVKELELA--TMQVHPLFRNI----GSAEQEKFNLLTKMSEYR 229
K+Y+++R AS ESVK+ K L + T + LF I EQ + ++L K+S +R
Sbjct: 481 EKQYLRTRNAASAESVKRAKTLAQSGDTTATNILFEEIDQTAADEEQRRLDMLAKVSGFR 540
Query: 230 PPSTVLEFGK 239
P TV E G+
Sbjct: 541 PAETVFEVGQ 550
>gi|340960309|gb|EGS21490.1| hypothetical protein CTHT_0033480 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 924
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L LAG S +Y+Y LD TARKI F+ G+ +LVVTDVAAR
Sbjct: 369 TIIFTATKHHVEYISNLLRLAGFSVSYVYGSLDQTARKIQVDNFRRGRTNILVVTDVAAR 428
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AY+LV +L Y LDL LFLGR+
Sbjct: 429 GIDIPVLANVINYDFPPQPKIFVHRVGRTARAGQRGWAYALVRESDLPYLLDLQLFLGRR 488
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + K +D + G + + +E+ + + + + D+ +++ A K Y+K
Sbjct: 489 LVLGREE-KDPSFARDIVVGSLKRVELENNVEWVNKVLHENEDIGALKRVTAKAEKLYMK 547
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +E+ ++ Q+H +F + EQ + NLL+K++ Y+P T+ E G
Sbjct: 548 TRNPASSQSAKRAREVIVSKGWGQLHAIFGEEAANEEQVRDNLLSKITGYKPQETIFEIG 607
>gi|440803241|gb|ELR24149.1| ATPdependent RNA helicase ddx54, putative [Acanthamoeba castellanii
str. Neff]
Length = 792
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 155/241 (64%), Gaps = 17/241 (7%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF AT++HVEY+ ++L L IS T +Y +D TARK+N +F+ G+ RVL+VTDVAARG
Sbjct: 212 VVFVATRHHVEYLQELLRLGDISVTSVYGTMDQTARKLNLTRFRNGQARVLLVTDVAARG 271
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP LD VINY+FP + KLFVHRVGR RSG AYSLVS DEL Y LD+ LF+G KP
Sbjct: 272 LDIPQLDYVINYDFPARPKLFVHRVGR-----RSGTAYSLVSPDELAYMLDVHLFMGWKP 326
Query: 123 --VLADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
V+ + G+ H+ + +G++P + ++N + +D++ + K NAYK+Y
Sbjct: 327 KHVVPE----GEEYHESEVYYGRLPTDTISFYSEFVLNSLNNHSDLQALYKVTLNAYKQY 382
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIG--SAEQ-EKFNLLTKMSEYRPPSTVLE 236
++R S ESVK+ K +L + +HP G + EQ E + ++ + ++RPP TVLE
Sbjct: 383 HRTRTAPSPESVKRAK--QLPSDGLHPCLARFGVVAKEQVEAIDFISSLKKFRPPQTVLE 440
Query: 237 F 237
Sbjct: 441 M 441
>gi|358384615|gb|EHK22212.1| hypothetical protein TRIVIDRAFT_209061 [Trichoderma virens Gv29-8]
Length = 897
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 160/248 (64%), Gaps = 16/248 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY++ +L AG +++++Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 363 TIIFTATKHHVEYLYNLLKQAGFATSHVYGSLDQTARRIQVEDFRMGKTNLLVVTDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAG+ G AYSLV + Y LDL LFLG+K
Sbjct: 423 GIDIPVLANVINYDFPPQPKVFIHRVGRTARAGQRGWAYSLVRDVDAPYLLDLQLFLGKK 482
Query: 122 PVLADDSMKGKIRHQ-----DGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
V+ G++ + D + G +P+ + + + +++ + D+E ++ A
Sbjct: 483 LVV------GQVEKEPSYTDDVVVGALPRDAVGTHVEWLNKFLDENEDVEALRGVAIKAE 536
Query: 177 KKYVKSRPGASVESVKKVKELELATM---QVHPLF-RNIGSAEQEKFNLLTKMSEYRPPS 232
K Y+K+R AS +S K+ +E E+A+ Q+HPLF +++ AE+ + +L K+S +RP
Sbjct: 537 KLYMKTRNSASSQSAKRSRE-EVASRGWSQLHPLFGKDVDGAEEARAAMLAKISNFRPQE 595
Query: 233 TVLEFGKA 240
T+ E G+
Sbjct: 596 TIFEVGQG 603
>gi|302142729|emb|CBI19932.3| unnamed protein product [Vitis vinifera]
Length = 786
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 158/250 (63%), Gaps = 18/250 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + GI ++ Y D+D ARKI+ ++F++ K +L+VTDVAAR
Sbjct: 273 TLIFVSTKHHVEFLNVLFREEGIEASVCYGDMDQDARKIHISRFRSRKTMLLIVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD V+N++FP K K+FVHRVGR ARAGR+G A+S V+S+++ Y LDL LFL K
Sbjct: 333 GIDIPLLDNVVNWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFLS-K 391
Query: 122 PVLADDSMKGKIRHQD--------------GMFGKIPQGLMEDQISEIMNWVELDADMEG 167
P+ A + + ++ D ++G++PQ +++ + V+ A++
Sbjct: 392 PIRAAPTEEEVLQDPDEVMSKIDQIVANGGTVYGRLPQTVIDLVSDRVRELVDSSAELAS 451
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLTKMS 226
+QKTC NA++ Y K++P S ES+++ K+L + HP+F+N+ G E ++
Sbjct: 452 LQKTCTNAFRLYSKTKPSPSRESIRRAKDLPREGL--HPIFKNVLGGGELMALAFSERLK 509
Query: 227 EYRPPSTVLE 236
+RP T+LE
Sbjct: 510 AFRPKQTILE 519
>gi|406865244|gb|EKD18286.1| putative ATP-dependent RNA helicase dbp10 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1090
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 146/244 (59%), Gaps = 11/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L L+G + ++ Y LD TAR F+TG+ +LVVTDVAAR
Sbjct: 490 TIIFAATKHHVDYITSLLRLSGFAVSHAYGSLDQTARNQQVEDFRTGRSNILVVTDVAAR 549
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLG++
Sbjct: 550 GIDIPVLANVINYDFPPQPKIFVHRVGRTARAGKRGWSYSLVRDTDAPYLLDLQLFLGKR 609
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
+L DS +D + G L D++ W+ D D+ ++ K
Sbjct: 610 LLLGRDSGDTPNYAEDVIVG----ALFRDKLEATSEWITKLLGDDDDLSALRGVAVKGEK 665
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
+Y+++R AS ES + KE+ MQ+HPLF N S EQ + ++L ++S +RP TV
Sbjct: 666 QYIRTRNSASSESANRAKEVVASKGWMQLHPLFNNETTSTEQARIDMLARISGFRPAETV 725
Query: 235 LEFG 238
E G
Sbjct: 726 FEIG 729
>gi|67516603|ref|XP_658187.1| hypothetical protein AN0583.2 [Aspergillus nidulans FGSC A4]
gi|74681494|sp|Q5BFU7.1|DBP10_EMENI RecName: Full=ATP-dependent RNA helicase dbp10
gi|40747526|gb|EAA66682.1| hypothetical protein AN0583.2 [Aspergillus nidulans FGSC A4]
gi|259489152|tpe|CBF89188.1| TPA: ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFU7] [Aspergillus
nidulans FGSC A4]
Length = 936
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 150/247 (60%), Gaps = 12/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y+Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 376 TIVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAAR 435
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + Y LDL LFLGRK
Sbjct: 436 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRK 495
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
VL +S + +D G +P+ D +S+ WV + DAD+ + K
Sbjct: 496 LVLGRESDQVNF-AEDVAVGSLPR----DGLSQTCEWVSRVLDDDADIFAQRAVSTKGEK 550
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K++ + VHPLF++ S E E+ +L ++ YRP T+
Sbjct: 551 LYLRTRNAASAESAKRAKQVVTSDNWTAVHPLFQDEASNLEAEREKMLARIGGYRPQETI 610
Query: 235 LEFGKAR 241
E R
Sbjct: 611 FEVQNRR 617
>gi|359492294|ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Vitis vinifera]
Length = 784
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 160/250 (64%), Gaps = 16/250 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + GI ++ Y D+D ARKI+ ++F++ K +L+VTDVAA
Sbjct: 272 QTLIFVSTKHHVEFLNVLFREEGIEASVCYGDMDQDARKIHISRFRSRKTMLLIVTDVAA 331
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD V+N++FP K K+FVHRVGR ARAGR+G A+S V+S+++ Y LDL LFL +
Sbjct: 332 RGIDIPLLDNVVNWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFLSK 391
Query: 121 --------KPVLAD-DSMKGKIRH--QDG--MFGKIPQGLMEDQISEIMNWVELDADMEG 167
+ VL D D + KI +G ++G++PQ +++ + V+ A++
Sbjct: 392 PIRAAPTEEEVLQDPDEVMSKIDQIVANGGTVYGRLPQTVIDLVSDRVRELVDSSAELAS 451
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLTKMS 226
+QKTC NA++ Y K++P S ES+++ K+L + HP+F+N+ G E ++
Sbjct: 452 LQKTCTNAFRLYSKTKPSPSRESIRRAKDLPREGL--HPIFKNVLGGGELMALAFSERLK 509
Query: 227 EYRPPSTVLE 236
+RP T+LE
Sbjct: 510 AFRPKQTILE 519
>gi|255582203|ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 789
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 159/253 (62%), Gaps = 24/253 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + GI + Y D+D ARKI+ ++F+ K +L+VTDVAAR
Sbjct: 273 TLIFVSTKHHVEFLNILFREEGIEPSVCYGDMDQDARKIHVSRFRAQKTMLLIVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+FVHRVGR ARAGR+G A+S V+S+++ Y LDL LFL K
Sbjct: 333 GIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFLS-K 391
Query: 122 PVLADDSMKGKIRHQD--------------GMFGKIPQ---GLMEDQISEIMNWVELDAD 164
P+ A + + ++ D ++G+ PQ L+ D++ E+ ++ A+
Sbjct: 392 PIRAAPTEEEVVKDMDRVMMKINEAVANGETIYGRFPQTVLDLVSDRVREV---IDSSAE 448
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLT 223
+ +QKTC NA++ Y K++P + ES+++VK +L +HP+F+N +G E
Sbjct: 449 LTSLQKTCTNAFRLYTKTKPLPAKESIRRVK--DLPHEGIHPIFKNGLGGGELTALAFSE 506
Query: 224 KMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 507 RLKAFRPKQTILE 519
>gi|301111750|ref|XP_002904954.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095284|gb|EEY53336.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 847
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 149/248 (60%), Gaps = 17/248 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT++HVE++H +L I ++ Y D+D +RKIN KF+ K +L+VTDVAAR
Sbjct: 282 TIVFAATRHHVEFLHALLAANHIEASCAYGDMDQASRKINLGKFRAKKTNLLIVTDVAAR 341
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ V+NY+FP AKLFVHRVGR ARAGRSG A+S V DE + +DL L++GR+
Sbjct: 342 GIDIPLLNNVLNYSFPPTAKLFVHRVGRAARAGRSGTAFSFVDPDETPFMVDLHLYIGRR 401
Query: 122 PVLADDSMK----------GKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKT 171
L D S + +R +D +G P L++ + + V + + K
Sbjct: 402 --LEDSSPEESAGTKPYSLSTMRVEDVHYGAFPNELIDQENEALQETVRSHPQVSPLVKV 459
Query: 172 CNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN---IGSAEQEKFNLLTKMSEY 228
C+NAYK Y ++R S S+++ K ELA +VHPLF+ + ++ +K + + +
Sbjct: 460 CDNAYKAYARTRADPSKNSIRRGK--ELAVKKVHPLFQQEYVLDESKADKAAYIDSLQTF 517
Query: 229 RPPSTVLE 236
RPP T+ E
Sbjct: 518 RPPQTIFE 525
>gi|119471856|ref|XP_001258230.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034063|sp|A1DNG2.1|DBP10_NEOFI RecName: Full=ATP-dependent RNA helicase dbp10
gi|119406382|gb|EAW16333.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 934
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 151/248 (60%), Gaps = 11/248 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y+Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 377 TIVFAATKHHVDYLYSLLSEAGFAVSYVYGSLDQTARKIQVQNFRTGMTNILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 437 GIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G +P+ D +S+ WV + +AD+ + K
Sbjct: 497 LVVGREFGDQVNFAEDVVTGSLPR----DGLSQSCEWVTKVLDDNADLAAQRTVAAKGEK 552
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K++ + +HPLF++ S E E+ +L ++ YRPP T+
Sbjct: 553 LYMRTRNSASLESAKRSKQVVSSDNWTSIHPLFQDETSNLEAEREKMLARIGGYRPPETI 612
Query: 235 LEFGKARF 242
E R
Sbjct: 613 FEVNNRRM 620
>gi|70992295|ref|XP_750996.1| ATP dependent RNA helicase (Dbp10) [Aspergillus fumigatus Af293]
gi|74697392|sp|Q8NJM2.1|DBP10_ASPFU RecName: Full=ATP-dependent RNA helicase dbp10
gi|21627815|emb|CAD37147.1| putative ATP-dependent RNA helicase [Aspergillus fumigatus]
gi|66848629|gb|EAL88958.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus fumigatus
Af293]
gi|159124566|gb|EDP49684.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus fumigatus
A1163]
Length = 869
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 151/248 (60%), Gaps = 11/248 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y+Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 357 TIVFAATKHHVDYLYSLLCEAGFAVSYVYGSLDQTARKIQVQNFRTGMTNILVVTDVAAR 416
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 417 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 476
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G +P+ D +S+ WV + +AD+ + K
Sbjct: 477 LVVGREFGDQVNFAEDVVTGSLPR----DGLSQSCEWVTKVLDDNADLAAQRTVAAKGEK 532
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K++ + VHPLF++ S E E+ +L ++ YRPP T+
Sbjct: 533 LYMRTRNAASLESAKRSKQVVSSDNWTSVHPLFQDETSNLEAEREKMLARIGGYRPPETI 592
Query: 235 LEFGKARF 242
E R
Sbjct: 593 FEVNNRRM 600
>gi|444723055|gb|ELW63720.1| ATP-dependent RNA helicase DDX54 [Tupaia chinensis]
Length = 937
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 165/333 (49%), Gaps = 97/333 (29%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKIN------------------- 41
TVVF ATK+H EY+ ++L +S +IYS LD TARKIN
Sbjct: 340 QTVVFVATKHHAEYLSELLTSQRVSCAHIYSALDQTARKINLAKFAHGKCSALIVTDLAA 399
Query: 42 -------------------------------AAKFQTGKIRVLVVTDVAARGIDIPSLDA 70
AKF GK L+VTD+AARG+DIP LD
Sbjct: 400 RGLDIPLLDNVINYSFPAKSKLFLHRVEQESHAKFAHGKCSALIVTDLAARGLDIPLLDN 459
Query: 71 VINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLA--DDS 128
VINY+FP K+KLF+HRVGR ARAGRSG AYSLV+ DEL Y LDL LFLGR LA +
Sbjct: 460 VINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDELPYLLDLHLFLGRSLSLARPHEE 519
Query: 129 MKGKIR------------------------------------HQ--------DGMFGKIP 144
G++ H+ DG+ G++P
Sbjct: 520 PSGRVARAGRSGTAYSLVAPDELPYLLDLHLFLGRSLSLARPHEEPSGAVTADGVLGRVP 579
Query: 145 QGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQV 204
Q +++D+ S + N +E ++ G+ + +NA ++Y++SRP S ES+K+ KEL+LA + +
Sbjct: 580 QSVVDDEDSSLQNTLEASMELRGLGRVADNAQQQYMRSRPAPSPESIKRAKELDLAGLGL 639
Query: 205 HPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
HPLF + E ++ L+ + Y +T+ E
Sbjct: 640 HPLFSSRFEEKELQRLRLVDGIRNYHSRATIFE 672
>gi|452838537|gb|EME40477.1| hypothetical protein DOTSEDRAFT_90700 [Dothistroma septosporum
NZE10]
Length = 1010
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 148/248 (59%), Gaps = 16/248 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+FTATK+HVEY+ L G + +Y+Y LD TARK+ F+ G ++VVTDVAAR
Sbjct: 461 TVIFTATKHHVEYLANFLKSFGYAVSYVYGALDQTARKMQVEDFRRGMTNIMVVTDVAAR 520
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AYSL++S +L Y LDL LFL R+
Sbjct: 521 GIDIPVLANVINYDFPSQPKVFVHRVGRTARAGKQGWAYSLITSSDLPYLLDLQLFLSRR 580
Query: 122 PVLADDSMKGKIRHQDGMF------GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
VL G+ H MF G + + +E E + + D D+ ++
Sbjct: 581 LVL------GRAEHDSNMFKDAVVIGAMKRDKIEQYSEEALKLLNEDDDLALMRDVAAKG 634
Query: 176 YKKYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIG--SAEQEKFNLLTKMSEYRPP 231
K+Y+++R AS ESVK+ K+L + + LF G EQ++ ++L ++S +RP
Sbjct: 635 EKQYMRTRNAASAESVKRAKDLSAGEHFSEANMLFDAHGHEDVEQQRLDMLARVSGFRPK 694
Query: 232 STVLEFGK 239
TV E GK
Sbjct: 695 ETVFEVGK 702
>gi|356558698|ref|XP_003547640.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 162/252 (64%), Gaps = 22/252 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + GI + Y D+D ARKI+ ++F++ K +L+VTDVAAR
Sbjct: 264 TLIFVSTKHHVEFLNLLFREEGIEPSVCYGDMDQDARKIHVSRFRSRKTMLLIVTDVAAR 323
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD VIN++FP K K+FVHRVGR ARAGR+G AYS V+ +++ Y LDL LFL +
Sbjct: 324 GIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFLSKP 383
Query: 121 -KPVLADDS----MKG-------KIRHQDGMFGKIPQ---GLMEDQISEIMNWVELDADM 165
KP ++ M+G + +++ ++G+ PQ L+ D++ EI ++ A++
Sbjct: 384 IKPAPTEEEVLQDMEGVLSRCEQAMANRETIYGRFPQKVIDLVSDRVREI---IDTSAEL 440
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLTK 224
E +Q+TC NA++ Y K++P + ES+++VK+L + HP+F N+ + E
Sbjct: 441 ELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPHEGL--HPMFMNVLETGELTALAFSEH 498
Query: 225 MSEYRPPSTVLE 236
+ ++RP T+LE
Sbjct: 499 LKKFRPKQTILE 510
>gi|348685911|gb|EGZ25726.1| hypothetical protein PHYSODRAFT_486355 [Phytophthora sojae]
Length = 852
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 149/245 (60%), Gaps = 12/245 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT++HVE++H +L I ++ Y D+D +RKIN KF+ K +L+VTDVAAR
Sbjct: 282 TIVFAATRHHVEFLHALLAANHIEASCAYGDMDQASRKINLGKFRAKKTSLLIVTDVAAR 341
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ V+NY+FP AKLFVHRVGR ARAGRSG A+S V DE + +DL L++GR+
Sbjct: 342 GIDIPLLNNVLNYSFPPTAKLFVHRVGRAARAGRSGTAFSFVDPDESPFMVDLHLYIGRR 401
Query: 122 -----PVLADDS--MKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
P L D ++R +D +G P L++ + I + + + K C+N
Sbjct: 402 LEDSSPELTDTKPYSLSEMRVEDVHYGAFPNELIDQENEAIQELMRSHPQVSPLVKVCDN 461
Query: 175 AYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN---IGSAEQEKFNLLTKMSEYRPP 231
AYK Y ++R S S+++ K ELA ++HPLF+ + ++ +K + + +RPP
Sbjct: 462 AYKAYARTRADPSKLSIRRGK--ELAVKKMHPLFQKEYVLEKSKADKAAYIDSLQTFRPP 519
Query: 232 STVLE 236
T+ E
Sbjct: 520 QTIFE 524
>gi|358366421|dbj|GAA83042.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 934
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y++ +L AG +++Y Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 380 TIIFAATKHHVDYLYSLLKEAGFATSYAYGSLDQTARKIQVHNFRTGITNILVVTDVAAR 439
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAGR+G +YSLV + Y LDL LFLGR+
Sbjct: 440 GIDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRR 499
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LD--ADMEGIQKTCNNAYK 177
VL + + +D + G P+ D +S+ WV LD D+ + + K
Sbjct: 500 LVLGREHGESVNFAEDVVVGGFPR----DGLSQSCEWVTKVLDDTVDIAAQRSVASKGEK 555
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ KE+ + +HPLF + S E E+ +L ++ YRP T+
Sbjct: 556 LYLRTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKMLARIGGYRPNETI 615
Query: 235 LEFGKAR 241
E R
Sbjct: 616 FEVNNRR 622
>gi|346325171|gb|EGX94768.1| dead box ATP-dependent rna helicase [Cordyceps militaris CM01]
Length = 891
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 4/242 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFTATK+HVEY+ +L AG + ++ Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 357 TIVFTATKHHVEYIANLLQWAGFAVSHAYGSLDQTARRIQVEDFRHGKTNILVVTDVAAR 416
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y +DL LFLG++
Sbjct: 417 GIDIPVLANVINYDFPSQPKIFVHRVGRTARAGQRGWSYSLVRDTDAPYLVDLQLFLGKQ 476
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ K D + G + + +E+ + + + D+ +QK A K Y+K
Sbjct: 477 LVIGQQKEKPSY-ADDVVVGSLIRNTLEEHVEWFNRVIHDNDDISALQKVSIKAEKLYLK 535
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +E+ A +Q+HPLF N + E+ + ++ K+S +RP T+ E
Sbjct: 536 TRNSASSQSAKRAREVVASGAWVQLHPLFGNDVDRGEKARAEMMAKISGFRPNETIFEIS 595
Query: 239 KA 240
++
Sbjct: 596 RS 597
>gi|171690518|ref|XP_001910184.1| hypothetical protein [Podospora anserina S mat+]
gi|170945207|emb|CAP71318.1| unnamed protein product [Podospora anserina S mat+]
Length = 924
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 150/240 (62%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +YIY LD TARKI F+ G+ +LVVTDVAAR
Sbjct: 369 TIIFTATKHHVEYIAHLLRHAGFAVSYIYGSLDQTARKIQVDDFRRGRTNILVVTDVAAR 428
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AY+LV +L Y +DL LFLGR+
Sbjct: 429 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYALVRESDLPYLIDLQLFLGRR 488
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ D QD + G + + +E+Q + + + D+ ++ A K Y++
Sbjct: 489 LVMGKDGQDPSF-AQDVVLGALKRSELENQTEWVNKVLNEEGDISALRGVTLKAEKLYMR 547
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS S K+ +E+ Q+HPLF +AE+ + NLL+K+S ++P TV E G
Sbjct: 548 TRNSASSSSAKRAREIINSKGWTQLHPLFGVEAINAEEARDNLLSKISLFKPQETVFEIG 607
>gi|336263707|ref|XP_003346633.1| hypothetical protein SMAC_04806 [Sordaria macrospora k-hell]
gi|380090528|emb|CCC11825.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 934
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 150/240 (62%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L LAG + +Y+Y LD TAR I F+ G+ +LVVTDVAAR
Sbjct: 378 TIIFTATKHHVEYIQNLLKLAGFAVSYVYGSLDQTARLIQVDNFRRGRTHILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P+L VINY+FP + K+FVHRVGR ARAG+ G AY LV +L Y LDL LFLGRK
Sbjct: 438 GIDMPALANVINYDFPSQPKIFVHRVGRTARAGQRGWAYGLVRQSDLPYLLDLQLFLGRK 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + K D + G + + ++ I + ++ AD+ ++ A K Y+K
Sbjct: 498 LIIGHE-QKNPSFAADVVVGTLKREGVDVNIEWVEKALKESADLNALKGVAAKAEKLYMK 556
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +E+ + Q+HPLF ++ + +LL++++ ++P T+ E G
Sbjct: 557 TRNSASSQSAKRAREVAQSKGWTQLHPLFGEEAAESQAARDDLLSRINRFKPQETIFELG 616
>gi|145240463|ref|XP_001392878.1| ATP-dependent RNA helicase DBP10 [Aspergillus niger CBS 513.88]
gi|134034062|sp|A2QRY2.1|DBP10_ASPNC RecName: Full=ATP-dependent RNA helicase dbp10
gi|134077396|emb|CAK40010.1| unnamed protein product [Aspergillus niger]
Length = 932
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y++ +L AG +++Y Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 377 TIIFAATKHHVDYLYSLLNEAGFATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAGR+G +YSLV + Y LDL LFLGR+
Sbjct: 437 GIDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRR 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LD--ADMEGIQKTCNNAYK 177
VL + +D + G P+ D +S+ WV LD D+ + + K
Sbjct: 497 LVLGREHGDQVNFAEDVVVGGFPR----DGLSQSCEWVNKVLDDTVDIAAQRSVASKGEK 552
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ KE+ + +HPLF + S E E+ +L ++ YRP T+
Sbjct: 553 LYLRTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKMLARIGGYRPNETI 612
Query: 235 LEFGKAR 241
E R
Sbjct: 613 FEVNNRR 619
>gi|453081414|gb|EMF09463.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 849
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 152/248 (61%), Gaps = 16/248 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVFT+TK+HVEY+ L G +++Y+Y LD TARK+ F++G +LVVTDVAAR
Sbjct: 280 TVVFTSTKHHVEYLANFLKAWGYATSYVYGSLDQTARKMQVHDFRSGISNILVVTDVAAR 339
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P L VINY+FP + K+FVHRVGR ARAG+ G +YSL++ ++ Y LDL LFL RK
Sbjct: 340 GLDVPLLANVINYDFPSQPKIFVHRVGRTARAGKEGWSYSLITQPDMPYLLDLQLFLSRK 399
Query: 122 PVLADDSMKGKIRHQDGMF------GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
++ G+ + GMF G + +E E ++ D D++ ++
Sbjct: 400 LIM------GRTSKEPGMFQHAIVTGNFRRDALERYTEEAAKVIDEDIDLQSMRDVAAKG 453
Query: 176 YKKYVKSRPGASVESVKKVKELELA--TMQVHPLFRNIGSA--EQEKFNLLTKMSEYRPP 231
K+Y+++R AS ESVK+ K++ + + + LF SA EQ++ ++L ++S +RP
Sbjct: 454 EKQYLRTRNSASAESVKRAKQVAQSEDSSATNMLFEADESADVEQQRLDMLARVSSFRPV 513
Query: 232 STVLEFGK 239
TV E GK
Sbjct: 514 ETVFEVGK 521
>gi|350629908|gb|EHA18281.1| hypothetical protein ASPNIDRAFT_38116 [Aspergillus niger ATCC 1015]
Length = 932
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y++ +L AG +++Y Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 377 TIIFAATKHHVDYLYSLLNEAGFATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAGR+G +YSLV + Y LDL LFLGR+
Sbjct: 437 GIDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRR 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LD--ADMEGIQKTCNNAYK 177
VL + +D + G P+ D +S+ WV LD D+ + + K
Sbjct: 497 LVLGREHGDQVNFAEDVVVGGFPR----DGLSQSCEWVNKVLDDTVDIAAQRSVASKGEK 552
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ KE+ + +HPLF + S E E+ +L ++ YRP T+
Sbjct: 553 LYLRTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKMLARIGGYRPNETI 612
Query: 235 LEFGKAR 241
E R
Sbjct: 613 FEVNNRR 619
>gi|356506148|ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 160/252 (63%), Gaps = 22/252 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + GI + Y D+D ARKI+ ++F+ K +L+VTDVAAR
Sbjct: 264 TLIFVSTKHHVEFLNVLFREEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDVAAR 323
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD VIN++FP K K+FVHRVGR ARAGR+G AYS V+ +++ Y LDL LFL +
Sbjct: 324 GIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFLSKP 383
Query: 121 -KPVLADDS----MKG-------KIRHQDGMFGKIPQ---GLMEDQISEIMNWVELDADM 165
KP ++ M G + +++ ++G+ PQ L+ D++ EI ++ A++
Sbjct: 384 IKPAPTEEEFLQDMDGVMSRCEQAMANRETIYGRFPQKVIDLVSDRVREI---IDTSAEL 440
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLTK 224
E +Q+TC NA++ Y K++P + ES+++VK+L + HP+F N+ + E
Sbjct: 441 ELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPHEGL--HPMFMNVLETGELTALAFSEH 498
Query: 225 MSEYRPPSTVLE 236
+ ++RP T+LE
Sbjct: 499 LKKFRPKQTILE 510
>gi|37573051|dbj|BAC98579.1| putative ATP-dependent RNA-helicase [Oryza sativa Japonica Group]
Length = 828
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAA
Sbjct: 271 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAA 330
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N++FP K KLFVHRVGR AR GRSG AY+ V+S+++ Y LDL LFL
Sbjct: 331 RGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLS- 389
Query: 121 KPVLADDSMKGKIRHQDGM--------------FGKIPQ---GLMEDQISEIMNWVELDA 163
KP+ + + ++ +GM +G+ PQ L+ D I E++N
Sbjct: 390 KPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIKEVINGC---T 446
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLL 222
D+ ++K C NA+ Y+K+RP S ES+++VK+L + HP+FR++ GS E
Sbjct: 447 DLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL--HPIFRDVLGSDELSALAFS 504
Query: 223 TKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 505 ERLKSFRPKQTILE 518
>gi|340521482|gb|EGR51716.1| predicted protein [Trichoderma reesei QM6a]
Length = 914
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 155/243 (63%), Gaps = 6/243 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY++ +L AG +++++Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 363 TIIFAATKHHVEYLYNLLKHAGFATSHVYGSLDQTARRIQVEDFRMGKTNLLVVTDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAG+ G AYSLV + Y LDL LFLG+K
Sbjct: 423 GIDIPVLANVINYDFPPQPKVFIHRVGRTARAGQRGWAYSLVRDVDAPYLLDLQLFLGKK 482
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + R D + G + + + + + +++ + D+E ++ A K Y+K
Sbjct: 483 LVLGQTETEPSYR-DDVVVGSLQRDAVGTHVEWLNKFLKENEDVEALRGVAAKAEKLYMK 541
Query: 182 SRPGASVESVKKVKELELATM---QVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+R AS +S K+ +E E+A+ Q+HPLF +++ E+ + +L ++S ++P T+ E
Sbjct: 542 TRNSASSQSAKRARE-EVASKGWSQLHPLFGKDVDGMEEARAAMLARISNFKPQETIFEV 600
Query: 238 GKA 240
G+
Sbjct: 601 GQG 603
>gi|115476424|ref|NP_001061808.1| Os08g0416100 [Oryza sativa Japonica Group]
gi|158513705|sp|A3BT52.2|RH29_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 29; Short=RNAH
gi|113623777|dbj|BAF23722.1| Os08g0416100 [Oryza sativa Japonica Group]
gi|222640554|gb|EEE68686.1| hypothetical protein OsJ_27320 [Oryza sativa Japonica Group]
Length = 851
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAA
Sbjct: 294 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAA 353
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N++FP K KLFVHRVGR AR GRSG AY+ V+S+++ Y LDL LFL
Sbjct: 354 RGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLS- 412
Query: 121 KPVLADDSMKGKIRHQDGM--------------FGKIPQ---GLMEDQISEIMNWVELDA 163
KP+ + + ++ +GM +G+ PQ L+ D I E++N
Sbjct: 413 KPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIKEVINGC---T 469
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLL 222
D+ ++K C NA+ Y+K+RP S ES+++VK+L + HP+FR++ GS E
Sbjct: 470 DLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL--HPIFRDVLGSDELSALAFS 527
Query: 223 TKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 528 ERLKSFRPKQTILE 541
>gi|218201153|gb|EEC83580.1| hypothetical protein OsI_29242 [Oryza sativa Indica Group]
Length = 883
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAA
Sbjct: 294 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAA 353
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N++FP K KLFVHRVGR AR GRSG AY+ V+S+++ Y LDL LFL
Sbjct: 354 RGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLS- 412
Query: 121 KPVLADDSMKGKIRHQDGM--------------FGKIPQ---GLMEDQISEIMNWVELDA 163
KP+ + + ++ +GM +G+ PQ L+ D I E++N
Sbjct: 413 KPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIREVINGC---T 469
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLL 222
D+ ++K C NA+ Y+K+RP S ES+++VK+L + HP+FR++ GS E
Sbjct: 470 DLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL--HPIFRDVLGSDELSALAFS 527
Query: 223 TKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 528 ERLKSFRPKQTILE 541
>gi|158513663|sp|A2YV85.2|RH29_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 29; Short=RNAH
Length = 851
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAA
Sbjct: 294 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAA 353
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N++FP K KLFVHRVGR AR GRSG AY+ V+S+++ Y LDL LFL
Sbjct: 354 RGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLS- 412
Query: 121 KPVLADDSMKGKIRHQDGM--------------FGKIPQ---GLMEDQISEIMNWVELDA 163
KP+ + + ++ +GM +G+ PQ L+ D I E++N
Sbjct: 413 KPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIREVINGC---T 469
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLL 222
D+ ++K C NA+ Y+K+RP S ES+++VK+L + HP+FR++ GS E
Sbjct: 470 DLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL--HPIFRDVLGSDELSALAFS 527
Query: 223 TKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 528 ERLKSFRPKQTILE 541
>gi|408398412|gb|EKJ77543.1| hypothetical protein FPSE_02293 [Fusarium pseudograminearum CS3096]
Length = 897
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +Y+Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 358 TIIFTATKHHVEYLANLLIYAGFAVSYVYGSLDQTARRIQVEDFRMGKTNILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+FVHRVGR ARAG+ G +YSLV + Y +DL LFLG+K
Sbjct: 418 GIDIPVLANVINFDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLIDLQLFLGKK 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ ++ K +D + G + + +E + + D+ ++ A K Y++
Sbjct: 478 LVVGQET-KNPSFSEDVVVGALKRDPVEGHVEWFNKSLHESEDINALRGVAVKAEKLYLR 536
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R A+ +S K+ KEL Q+HPLF ++ AEQ + ++L ++S +RP T+ E G
Sbjct: 537 TRNSAASQSAKRSKELVGSQGWTQLHPLFGEDVDGAEQARVDMLARISGFRPQETIFEIG 596
Query: 239 KAR 241
R
Sbjct: 597 GRR 599
>gi|46136501|ref|XP_389942.1| hypothetical protein FG09766.1 [Gibberella zeae PH-1]
gi|91206536|sp|Q4HZ42.1|DBP10_GIBZE RecName: Full=ATP-dependent RNA helicase DBP10
Length = 897
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +Y+Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 358 TIIFTATKHHVEYLANLLIYAGFAVSYVYGSLDQTARRIQVEDFRMGKTNILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+FVHRVGR ARAG+ G +YSLV + Y +DL LFLG+K
Sbjct: 418 GIDIPVLANVINFDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLIDLQLFLGKK 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ ++ K +D + G + + +E + + D+ ++ A K Y++
Sbjct: 478 LVVGQET-KNPSFSEDVVVGALKRDPVEGHVEWFNKSLHESEDINALRGVAVKAEKLYLR 536
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R A+ +S K+ KEL Q+HPLF ++ AEQ + ++L ++S +RP T+ E G
Sbjct: 537 TRNSAASQSAKRSKELVGSQGWTQLHPLFGEDVDGAEQARVDMLARISGFRPQETIFEIG 596
Query: 239 KAR 241
R
Sbjct: 597 GRR 599
>gi|119191696|ref|XP_001246454.1| hypothetical protein CIMG_00225 [Coccidioides immitis RS]
gi|118575169|sp|Q1EB38.1|DBP10_COCIM RecName: Full=ATP-dependent RNA helicase DBP10
gi|392864317|gb|EAS34854.2| ATP-dependent RNA helicase DBP10 [Coccidioides immitis RS]
Length = 927
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 13/248 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L +G + +Y Y LD TARKI + F+TG +LVVTDVAAR
Sbjct: 365 TIIFVATKHHVDYIASLLRESGFAVSYAYGSLDQTARKIQVSNFRTGISNILVVTDVAAR 424
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ VINY+FP +AK+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 425 GIDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 484
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G G+ + I+ WV + D D++ ++ K
Sbjct: 485 LVMGRGQQESANFAEDVVVG----GMARESIARSCEWVSKLLDEDIDIQNQREVAMKGEK 540
Query: 178 KYVKSRPGASVESVKKVKELELA---TMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPST 233
Y+++R AS ES K+ K++ + TM +HPLF N S E E+ +L ++ Y+P T
Sbjct: 541 LYIRTRNSASAESAKRAKDVVASDGWTM-LHPLFNNEASQMEVEREKMLARIGGYKPQET 599
Query: 234 VLEFGKAR 241
+ E R
Sbjct: 600 IFEISGRR 607
>gi|358393875|gb|EHK43276.1| hypothetical protein TRIATDRAFT_32758 [Trichoderma atroviride IMI
206040]
Length = 903
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 154/247 (62%), Gaps = 14/247 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY++ +L AG +++++Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 360 TIIFTATKHHVEYLYNLLQQAGFATSHVYGSLDQTARRIQVEDFRNGKTNLLVVTDVAAR 419
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+F+HRVGR ARAG+ G AYSLV + Y LDL LFLG++
Sbjct: 420 GIDIPVLANVINFDFPPQPKVFIHRVGRTARAGQRGWAYSLVRDIDAPYLLDLQLFLGKR 479
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW----VELDADMEGIQKTCNNAYK 177
V+ + K +D + G L D + M W ++ D+ ++ A K
Sbjct: 480 LVVG-QAEKSPSFTEDVVVGS----LQRDSVGTHMEWFNKFMDQSEDVSALRAVAAKAEK 534
Query: 178 KYVKSRPGASVESVKKVKELELATM---QVHPLF-RNIGSAEQEKFNLLTKMSEYRPPST 233
Y+K+R AS +S K+ +E E+A+ Q+HPLF ++ AE+ + +L K+S ++P T
Sbjct: 535 LYMKTRNSASSQSAKRSRE-EVASRGWSQLHPLFGEDVDDAEEARAAMLAKISNFKPQET 593
Query: 234 VLEFGKA 240
+ E G+
Sbjct: 594 IFEIGQG 600
>gi|51449873|gb|AAU01909.1| putative ATP-dependent RNA helicase [Oryza sativa Indica Group]
Length = 828
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ + +L+VTDVAA
Sbjct: 271 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARETMILIVTDVAA 330
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD V+N++FP K KLFVHRVGR AR GRSG AY+ V+S+++ Y LDL LFL
Sbjct: 331 RGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLS- 389
Query: 121 KPVLADDSMKGKIRHQDGM--------------FGKIPQ---GLMEDQISEIMNWVELDA 163
KP+ + + ++ +GM +G+ PQ L+ D I E++N
Sbjct: 390 KPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIKEVINGC---T 446
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLL 222
D+ ++K C NA+ Y+K+RP S ES+++VK+L + HP+FR++ GS E
Sbjct: 447 DLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL--HPIFRDVLGSDELSALAFS 504
Query: 223 TKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 505 ERLKSFRPKQTILE 518
>gi|121699888|ref|XP_001268209.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034061|sp|A1CTZ6.1|DBP10_ASPCL RecName: Full=ATP-dependent RNA helicase dbp10
gi|119396351|gb|EAW06783.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 935
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y+Y LD TARKI F++G +LVVTDVAAR
Sbjct: 376 TIVFAATKHHVDYLYSLLHEAGFAVSYVYGALDQTARKIQVQNFRSGLSNILVVTDVAAR 435
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 436 GIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 495
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
V+ ++ +D + G +P+ D +S+ WV DAD+ + K
Sbjct: 496 LVVGRENGDHVNFAEDVVAGGLPR----DGLSQNCEWVTKVLGDDADIAAQRTVATKGEK 551
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K++ + +HPLF++ S E E+ +L ++ YRP T+
Sbjct: 552 LYMRTRNSASLESAKRAKQVVSSDHWTSIHPLFQDESSNLEAEREKMLARIGGYRPSETI 611
Query: 235 LEFGKAR 241
E R
Sbjct: 612 FEVNTRR 618
>gi|85107031|ref|XP_962298.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
gi|74696531|sp|Q7S9J4.1|DBP10_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-10
gi|28923900|gb|EAA33062.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
Length = 934
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 150/244 (61%), Gaps = 12/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L LAG + +Y+Y LD TAR I F+ G+ +LVVTDVAAR
Sbjct: 377 TIIFTATKHHVEYIANLLKLAGFAVSYVYGSLDQTARLIQVDNFRRGRTHILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P+L VINY+FP + K+FVHRVGR ARAG+ G AY LV ++ Y LDL LFLGRK
Sbjct: 437 GIDMPALANVINYDFPSQPKIFVHRVGRTARAGQRGWAYGLVRQSDVPYLLDLQLFLGRK 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
++ D K D + G L D + + WVE AD++ ++ A K
Sbjct: 497 LIIGHD-QKNPSFAADVVVGT----LKRDGVDVNIEWVEKALKESADLKALKGVAAKAEK 551
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTV 234
Y+K+R AS +S K+ +E+ + Q+HPLF A+ + +LL++++ ++P T+
Sbjct: 552 LYMKTRNSASSQSAKRAREVTQSRGWTQLHPLFGEEAAEAQAARDDLLSRINRFKPQETI 611
Query: 235 LEFG 238
E G
Sbjct: 612 FELG 615
>gi|303313411|ref|XP_003066717.1| ATP-dependent RNA helicase DBP10, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106379|gb|EER24572.1| ATP-dependent RNA helicase DBP10, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 936
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 13/248 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+YV +L +G + +Y Y LD TARKI + F+TG +LVVTDVAAR
Sbjct: 374 TIIFVATKHHVDYVASLLRESGFAVSYAYGSLDQTARKIQVSNFRTGISNILVVTDVAAR 433
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ VINY+FP +AK+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 434 GIDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 493
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G G+ + I+ WV + D D++ ++ K
Sbjct: 494 LVMGRGQQESANFAEDVVVG----GMARESIARNCEWVSKLLDEDIDIQNQREVAMKGEK 549
Query: 178 KYVKSRPGASVESVKKVKELELA---TMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPST 233
Y+++R AS ES K+ K++ + TM +HPLF + S E E+ +L ++ Y+P T
Sbjct: 550 LYIRTRNSASAESAKRAKDVVASDGWTM-LHPLFNDEASQMEVEREQMLARIGGYKPQET 608
Query: 234 VLEFGKAR 241
+ E R
Sbjct: 609 IFEISGRR 616
>gi|320036334|gb|EFW18273.1| ATP-dependent RNA helicase DBP10 [Coccidioides posadasii str.
Silveira]
Length = 927
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 13/248 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+YV +L +G + +Y Y LD TARKI + F+TG +LVVTDVAAR
Sbjct: 365 TIIFVATKHHVDYVASLLRESGFAVSYAYGSLDQTARKIQVSNFRTGISNILVVTDVAAR 424
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ VINY+FP +AK+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 425 GIDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 484
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G G+ + I+ WV + D D++ ++ K
Sbjct: 485 LVMGRGQQESANFAEDVVVG----GMARESIARNCEWVSKLLDEDIDIQNQREVVMKGEK 540
Query: 178 KYVKSRPGASVESVKKVKELELA---TMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPST 233
Y+++R AS ES K+ K++ + TM +HPLF + S E E+ +L ++ Y+P T
Sbjct: 541 LYIRTRNSASAESAKRAKDVVASDGWTM-LHPLFNDEASQMEVEREQMLARIGGYKPQET 599
Query: 234 VLEFGKAR 241
+ E R
Sbjct: 600 IFEISGRR 607
>gi|341892664|gb|EGT48599.1| hypothetical protein CAEBREN_09605 [Caenorhabditis brenneri]
Length = 813
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 154/244 (63%), Gaps = 11/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT HVEYV IL AGI +++YS LD TARK N KF + +LVVTDVAAR
Sbjct: 268 TVIFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKQNIQKFHEKQNNILVVTDVAAR 327
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VIN +FP KAKLFVHRVGR ARAGRSG A SL+++DEL Y DL +FLG+
Sbjct: 328 GVDIPLLDTVINLHFPSKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGKP 387
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-ELDADMEGIQKTCNNAYKKYV 180
A D + + + + G++P ++ + +E N + + + +M +++ NA KY
Sbjct: 388 IKFAQDG--SEYKEDETLIGRVPDSIVSLE-TEFFNSIHDNNEEMIDLRQKATNAMMKYT 444
Query: 181 KSRPGASVESVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
++R S ES ++VK+ ++ T V HP + G +++ ++L ++S+Y+ +T+ E
Sbjct: 445 RTRQPPSAESARRVKQ-DIRTDSVECAPHPFLKAEG--DKQSNDILNRISQYKSRNTIFE 501
Query: 237 FGKA 240
K+
Sbjct: 502 MNKS 505
>gi|345570653|gb|EGX53474.1| hypothetical protein AOL_s00006g340 [Arthrobotrys oligospora ATCC
24927]
Length = 946
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 10/248 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HV+Y+ +L G + +Y+Y LD AR+ KF+TG+ ++LVVTDVAAR
Sbjct: 382 TIIFASTKHHVDYLASLLSALGYAVSYVYGTLDQVARRNQVEKFRTGESQILVVTDVAAR 441
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+FVHRVGR ARAGR G AYSLV +++ Y LDL LFLGRK
Sbjct: 442 GIDIPMLSNVINFDFPPQPKVFVHRVGRTARAGRRGWAYSLVRLEDMPYLLDLQLFLGRK 501
Query: 122 PVL--ADDSMKGKIRH-----QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
V D +GK + D + G + + +E I V D+ +++
Sbjct: 502 LVTDGEADINQGKKKEGFDFANDVIIGALKRDALERCTEAITQVVNASHDLTAMKQVAAR 561
Query: 175 AYKKYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPP 231
K Y K++ AS ESVK+ KE+ M V+P+F + + E EK ++L ++S YRP
Sbjct: 562 GEKLYQKTKTAASTESVKRSKEIVSGKHWMSVNPIFADEVDKLEMEKADMLKRLSNYRPQ 621
Query: 232 STVLEFGK 239
TV E G+
Sbjct: 622 ETVFEIGQ 629
>gi|315045858|ref|XP_003172304.1| ATP-dependent RNA helicase DBP10 [Arthroderma gypseum CBS 118893]
gi|311342690|gb|EFR01893.1| ATP-dependent RNA helicase DBP10 [Arthroderma gypseum CBS 118893]
Length = 940
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 145/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 378 TIVFVATKHHVEYIANLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LFLGRK
Sbjct: 438 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFLGRK 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 498 LLMGRGTTENANYAEDIVVGSLPRKSLESHCEYVDKLLSEDIDIEGLRSVSIRGEKLYMR 557
Query: 182 SRPGASVESVKKVKELELATM--QVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A +HPLF + S E E+ N+L ++ Y+P TV E
Sbjct: 558 TRNSASAESAKRAKDIVAADAWGTIHPLFNDESSRMEVERENMLARVGGYKPQETVFE 615
>gi|358334419|dbj|GAA28065.2| ATP-dependent RNA helicase DDX54/DBP10, partial [Clonorchis
sinensis]
Length = 844
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 135/213 (63%), Gaps = 15/213 (7%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF ATK+HVE+ +L A + T I+S LDP AR +F + +IRVL+VTDVAARG
Sbjct: 287 VVFFATKHHVEFFQMLLTEAELPCTCIHSGLDPAARNSAIKEFTSNQIRVLLVTDVAARG 346
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP LD VIN++FP + KLF+HRVGR ARAGRSG AYSL+ DEL Y D+L+FLG+
Sbjct: 347 VDIPLLDNVINFHFPPQPKLFLHRVGRVARAGRSGTAYSLIDPDELPYLFDVLVFLGKSL 406
Query: 122 ----PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
PV D+ + G+ P GL+ + V+ +A + ++K C NA
Sbjct: 407 QTSGPVSEDNV--------NDSLGRAPHGLVSSTGNVAQQIVDRNACIASMRKPCANAMN 458
Query: 178 KYVKSRPGASVESVKKVKELE--LATMQVHPLF 208
++VK+RP AS ESV++ KEL L ++ VHP F
Sbjct: 459 RFVKTRPKASNESVRRAKELRGMLHSLPVHPCF 491
>gi|391865804|gb|EIT75083.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 928
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 146/242 (60%), Gaps = 11/242 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 375 TIVFAATKHHVDYLYSLLREAGFAVSYAYGSLDQTARKIQVQNFRAGLSNILVVTDVAAR 434
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 435 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYMLDLQLFLGRR 494
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G +P+ D +S WV E +AD+ + K
Sbjct: 495 LVIGREHGDQVNFAEDVVVGSLPR----DGLSTSCEWVTKVLENEADIYSQRTIAGKGEK 550
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K++ + VHPLF + GS E E+ +L ++ YRP T+
Sbjct: 551 LYMRTRNSASLESAKRAKQVVSSDNWTAVHPLFNDQGSQMELEREKMLARIGGYRPQETI 610
Query: 235 LE 236
E
Sbjct: 611 FE 612
>gi|169773155|ref|XP_001821046.1| ATP-dependent RNA helicase DBP10 [Aspergillus oryzae RIB40]
gi|238491104|ref|XP_002376789.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
gi|91208275|sp|Q2UHC1.1|DBP10_ASPOR RecName: Full=ATP-dependent RNA helicase dbp10
gi|83768907|dbj|BAE59044.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697202|gb|EED53543.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
Length = 929
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 375 TIVFAATKHHVDYLYSLLREAGFAVSYAYGSLDQTARKIQVQNFRAGLSNILVVTDVAAR 434
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 435 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYMLDLQLFLGRR 494
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
V+ + +D + G +P+ D +S WV E +AD+ + K
Sbjct: 495 LVIGREHGDQVNFAEDVVVGSLPR----DGLSTSCEWVTKVLENEADIYSQRTIAGKGEK 550
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K++ + VHPLF + GS E E+ +L ++ YRP T+
Sbjct: 551 LYMRTRNSASLESAKRAKQVVSSDNWTAVHPLFNDQGSQMELEREKMLARIGGYRPQETI 610
Query: 235 LEFGKAR 241
E R
Sbjct: 611 FEVHNRR 617
>gi|322706702|gb|EFY98282.1| ATP-dependent RNA helicase dbp10 [Metarhizium anisopliae ARSEF 23]
Length = 892
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 149/238 (62%), Gaps = 4/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +++Y LD TAR+ F+ G+ +LVVTDVAAR
Sbjct: 358 TIIFTATKHHVEYLANVLQRAGFAVSHVYGSLDQTARRNQVEDFRRGRTNILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 418 GIDIPVLANVINYDFPSQPKIFVHRVGRTARAGQRGWSYSLVRDSDAPYLLDLQLFLGRR 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + + D + G + + L+E + + + D D+ ++ A K Y+K
Sbjct: 478 LVLGQEGEEPSF-ASDVIVGSLKRDLVESNVEWMNKLLHEDVDVSTLRGVAAKAEKLYLK 536
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
+R AS +S K+ +E+ +T Q+H LF ++ + EQ + ++L ++S ++P T+ E
Sbjct: 537 TRNSASSQSAKRSREIVSSTGWNQLHRLFGDDVDNMEQARADMLARISSFKPQETIFE 594
>gi|224085049|ref|XP_002307470.1| predicted protein [Populus trichocarpa]
gi|222856919|gb|EEE94466.1| predicted protein [Populus trichocarpa]
Length = 510
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 146/227 (64%), Gaps = 23/227 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + GI + Y D+D ARKI+ ++F+ K +L+VTDVAAR
Sbjct: 271 TLIFVSTKHHVEFLNVLFREDGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDVAAR 330
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VIN++FP K K+FVHRVGR ARAGR+G A+S V+S+++ Y LDL LFL K
Sbjct: 331 GIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAFSFVTSEDMPYLLDLHLFLS-K 389
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQG-----------------LMEDQISEIMNWVELDAD 164
PV A + + ++ DG+ KI Q L+ D++ EI++ A+
Sbjct: 390 PVKAAPTEEEVLQDIDGVMNKIDQAFANGETVYGRFPQTVLDLVSDRVREIIDS---SAE 446
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI 211
+ +QK C NA++ Y K++P + ES+K+VK+L + HP+F+N+
Sbjct: 447 LTSLQKACTNAFRLYTKTKPSPAKESIKRVKDLPCEGL--HPIFKNV 491
>gi|342884574|gb|EGU84781.1| hypothetical protein FOXB_04676 [Fusarium oxysporum Fo5176]
Length = 897
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 4/243 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +Y+Y LD TAR+I F+ GK +LVVTDVAAR
Sbjct: 358 TIIFTATKHHVEYLANLLIYAGFAVSYVYGSLDQTARRIQVEDFRRGKTNILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLG++
Sbjct: 418 GIDIPVLANVINFDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGKR 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ ++ K D + G + + +E Q+ + D+ ++ A K Y++
Sbjct: 478 LVIGQEA-KNPSFADDVVVGALKRDPVEAQVEWFNKALYESEDISALRGVAIKAEKLYLR 536
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R A+ +S K+ KEL Q+H LF ++ AEQ + N+L ++S +RP T+ E G
Sbjct: 537 TRNSAASQSAKRSKELVGSEGWTQLHALFGEDVDGAEQARANMLARISGFRPQETIFEIG 596
Query: 239 KAR 241
R
Sbjct: 597 GRR 599
>gi|322700977|gb|EFY92729.1| ATP-dependent RNA helicase dbp10 [Metarhizium acridum CQMa 102]
Length = 894
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 4/239 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG S +++Y LD TAR+ F+ GK +LVVTDVAAR
Sbjct: 360 TIIFTATKHHVEYLASVLQRAGFSVSHVYGSLDQTARRNQVEDFRRGKTNILVVTDVAAR 419
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 420 GIDIPVLANVINYDFPSQPKIFVHRVGRTARAGQRGWSYSLVRDSDAPYLLDLQLFLGRR 479
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + + D + G + + +E + + + D D+ ++ A K Y+K
Sbjct: 480 LVLGREGDEPSF-ASDVVVGSLRRDSVESNVEWMNKLLREDVDVGTLRGVAAKAEKLYLK 538
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLEF 237
+R AS +S K+ +E+ +T Q+H LF N + + EQ + ++L ++S +RP T+ E
Sbjct: 539 TRNSASSQSAKRSREIVSSTGWNQLHRLFGNDVDNMEQARADMLARISGFRPQETIFEI 597
>gi|336470872|gb|EGO59033.1| hypothetical protein NEUTE1DRAFT_60019 [Neurospora tetrasperma FGSC
2508]
gi|350291940|gb|EGZ73135.1| ATP-dependent RNA helicase dbp-10 [Neurospora tetrasperma FGSC
2509]
Length = 934
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 148/244 (60%), Gaps = 12/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFTATK+HVEY+ +L LAG + +Y+Y LD TAR I F+ G+ +LVVTDVAAR
Sbjct: 377 TIVFTATKHHVEYIANLLKLAGFAVSYVYGSLDQTARLIQVDNFRRGRTHILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P+L VINY+FP + K+FVHRVGR ARAG+ G AY LV ++ Y LDL LFLGRK
Sbjct: 437 GIDMPALANVINYDFPSQPKIFVHRVGRTARAGQRGWAYGLVRQSDVPYLLDLQLFLGRK 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
++ D K D + G L D + + WVE D++ ++ A K
Sbjct: 497 LIIGHD-QKNPSFAADVVVGT----LKRDGVDVNIEWVEKALKESTDLKALKGVAAKAEK 551
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTV 234
Y+K+R AS +S K+ +E+ + Q+HPLF A+ + +LL +++ ++P T+
Sbjct: 552 LYMKTRNSASSQSAKRAREVTQSRGWTQLHPLFGEEAAEAQAARDDLLNRINRFKPQETI 611
Query: 235 LEFG 238
E G
Sbjct: 612 FELG 615
>gi|295667653|ref|XP_002794376.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286482|gb|EEH42048.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 905
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ +L +G + +Y Y LD TARKI F++G +LVVTDVAAR
Sbjct: 363 TIIFTATKHHVDYLTSVLRQSGFAVSYAYGSLDQTARKIEVQNFRSGITHILVVTDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP ++K+FVHRVGR ARAGR+G +YSL+ + Y LDL LFLGR
Sbjct: 423 GIDIPILSNVINYDFPSQSKIFVHRVGRTARAGRTGWSYSLIRESDAPYLLDLQLFLGRP 482
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LDADME-GIQKTCN-NAYK 177
+L S + +D + G L DQ+S WV LD D++ +Q+ K
Sbjct: 483 LILGRASGQQVNYAEDVVVGS----LQRDQVSRYCEWVSKLLDEDVDVALQREVAMKGEK 538
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ KEL + M VHPLF + E+E+ +L ++ Y+P T+
Sbjct: 539 LYMRTRNSASSESAKRAKELVGSDEWMMVHPLFNDESSRLEEEREKMLARLGGYKPQETI 598
Query: 235 LEFGKAR 241
E G R
Sbjct: 599 FEIGGRR 605
>gi|334183955|ref|NP_177829.5| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
gi|75318355|sp|O49289.1|RH29_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 29
gi|2829912|gb|AAC00620.1| Similar ATP-dependent RNA Helicase [Arabidopsis thaliana]
gi|332197806|gb|AEE35927.1| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
Length = 845
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 153/249 (61%), Gaps = 16/249 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+V+ + L I + Y D+D ARKI+ ++F+ K +L+VTD+AAR
Sbjct: 274 TLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAAR 333
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD VIN++FP + K+FVHRVGR ARAGR+G AYS V+ +++ Y LDL LFL +
Sbjct: 334 GIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLHLFLSKP 393
Query: 121 -KPVLADDSMKGKIRH---------QDG--MFGKIPQGLMEDQISEIMNWVELDADMEGI 168
+P +D + + G ++G+ PQ ++ + ++ A+++ +
Sbjct: 394 VRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRFPQKTIDLIFNRTREMIDSSAELDSL 453
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSE 227
++T A++ Y K++P S ES+++ K+L + HP+FR+ I + E E + K+
Sbjct: 454 ERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGL--HPIFRSIIETGELEAMSFFQKIKN 511
Query: 228 YRPPSTVLE 236
+RP T+LE
Sbjct: 512 FRPKQTILE 520
>gi|378726362|gb|EHY52821.1| ATP-dependent RNA helicase dbp10 [Exophiala dermatitidis
NIH/UT8656]
Length = 931
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 145/243 (59%), Gaps = 3/243 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ ++L LAG + +Y+Y LD TARK F+TG+ +LVVTDVAAR
Sbjct: 368 TIVFAATKHHVEYLAQLLRLAGYAVSYVYGSLDQTARKTQVHAFRTGQTNILVVTDVAAR 427
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K++VHRVGR ARAG+ G +YSLV + Y LDL LFLGRK
Sbjct: 428 GIDIPVLANVINYDFPSQPKIYVHRVGRTARAGQKGWSYSLVRDVDAPYLLDLQLFLGRK 487
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + QD + G + ++ + +E DAD+ ++ K Y +
Sbjct: 488 LIVGRANTADVNFAQDVVVGTFRRDELQTNCEWVTKSLESDADLSALRSVAAKGEKLYQR 547
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS ES K+ K+L A ++H LF + E E+ +L ++ +RP ++ E G
Sbjct: 548 TRNSASSESAKRSKQLVTAQSWSELHALFNDQADDLEAEREKMLARVGGFRPQESIFEIG 607
Query: 239 KAR 241
R
Sbjct: 608 ARR 610
>gi|313233521|emb|CBY09693.1| unnamed protein product [Oikopleura dioica]
Length = 800
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 13/242 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQ------TGKIRVLVV 55
TV+F ATK+HVE V L + YIYS +DP ARK+ ++F+ +L+
Sbjct: 281 TVIFVATKHHVELVKLFLERYNYTPCYIYSSMDPFARKLMISRFRHEDEDPDKTTNILIT 340
Query: 56 TDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLL 115
TD+AARGIDIP LDAV+N++F KAK F+HRVGR ARAGR G AYS+VS++E+ Y LDL
Sbjct: 341 TDIAARGIDIPLLDAVVNFHFAAKAKTFIHRVGRVARAGRPGHAYSIVSNEEMPYLLDLH 400
Query: 116 LFLGRKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
+FLGR D K DG G+ PQ ++D+ + ++ AD++ K+ N
Sbjct: 401 VFLGRSLGFCKDGDKS----WDGKIGRYPQSAIDDEADIVSTAIKESADIQSQIKSAENG 456
Query: 176 YKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVL 235
YK + + + S ES K KE+++ T VHP+F ++ + Q ++L K++ +P T+
Sbjct: 457 YKGFRRHKEKPSSESCTKFKEIDMMTCAVHPIFGDVAAERQ---SILDKIATLKPKQTIF 513
Query: 236 EF 237
E+
Sbjct: 514 EY 515
>gi|325180097|emb|CCA14499.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 836
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 155/249 (62%), Gaps = 10/249 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTAT++HVE++H++L I S+ +Y ++D T+RK+N AKF+ GK +L+VTDVAAR
Sbjct: 272 TIIFTATRHHVEFLHQLLIANDIESSCVYGEMDQTSRKLNIAKFRAGKTNLLLVTDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ VINY+FP AKLFVHRVGR ARAG+SG A+SL+ E + +DL L++GR+
Sbjct: 332 GIDIPLLNNVINYSFPPTAKLFVHRVGRAARAGKSGTAFSLLDPTEYPFLVDLHLYIGRR 391
Query: 122 -----PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
PV + +++ ++ +G P + + + +I + ++ + + K C NA
Sbjct: 392 LEDSSPVNSKPYALEEMQVENIHYGAFPSEITDRENEQIQDLLKHHPVVSPLVKVCANAS 451
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRN--IGSAEQEKFNLLTKMSEYRPPSTV 234
K Y ++R S S+K+ K L++ Q HPLF+ + +K L ++ +RP T+
Sbjct: 452 KLYQRTRADPSKLSIKRAKGLQI---QCHPLFKKEFVDHDTAQKAECLARIQTFRPVQTI 508
Query: 235 LEFGKARFI 243
E +R +
Sbjct: 509 FEVASSRAV 517
>gi|312379831|gb|EFR25992.1| hypothetical protein AND_08228 [Anopheles darlingi]
Length = 803
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 14/214 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F T++HVE V IL AGI ++++YS LD +ARKIN AKF K+ VLVVTD+AAR
Sbjct: 259 TVIFAGTQHHVELVSLILTKAGIPNSHVYSALDASARKINTAKFTMRKVNVLVVTDIAAR 318
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPSLD VIN +FP K KLF+HRVGRCARAGRSGVAYS+ S+D++ + +DL +FL R
Sbjct: 319 GLDIPSLDYVINLHFPGKPKLFIHRVGRCARAGRSGVAYSIFSNDDIAHLIDLNMFLDRP 378
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++D + G P ++E + + +V+ D+ + + NNAYK+Y+
Sbjct: 379 LEVSDRA----------TIGIPPPEILETEHQLVQEYVQ-HIDLATVFRVSNNAYKQYIV 427
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAE 215
+RP AS S K+ K+ ++ + V + G A+
Sbjct: 428 TRPAASASSNKRAKQFKIDELAV---LEDFGDAD 458
>gi|313215164|emb|CBY42851.1| unnamed protein product [Oikopleura dioica]
Length = 518
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 146/242 (60%), Gaps = 13/242 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQ------TGKIRVLVV 55
TV+F ATK+HVE V L + YIYS +DP ARK+ ++F+ +L+
Sbjct: 12 TVIFVATKHHVELVKLFLERYNYTPCYIYSSMDPFARKLMISRFRHEDEDPDKTTNILIT 71
Query: 56 TDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLL 115
TD+AARGIDIP LDAV+N++F KAK F+HRVGR ARAGR G AYS+VS++E+ Y LDL
Sbjct: 72 TDIAARGIDIPLLDAVVNFHFAAKAKTFIHRVGRVARAGRPGHAYSIVSNEEMPYLLDLH 131
Query: 116 LFLGRKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
+FLGR D K DG G+ PQ ++D+ + ++ AD++ K+ N
Sbjct: 132 VFLGRSLGFCKDGDKS----WDGKIGRYPQSAIDDEADIVSTAIKESADIQSQIKSAENG 187
Query: 176 YKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVL 235
YK + + + S ES K KE+++ T VHP+F ++ + E+ ++L K++ +P T+
Sbjct: 188 YKGFRRHKEKPSSESCTKFKEIDMMTCAVHPIFGDVAA---ERQSILDKIATLKPKQTIF 244
Query: 236 EF 237
E+
Sbjct: 245 EY 246
>gi|226291932|gb|EEH47360.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides brasiliensis
Pb18]
Length = 895
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 155/252 (61%), Gaps = 11/252 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ +L +G + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 363 TIIFTATKHHVDYLTSVLRQSGFAVSYAYGSLDQTARKIEVQNFRCGITHILVVTDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP ++K+FVHRVGR ARAGR+G +YSL+ + Y LDL LFLGR
Sbjct: 423 GIDIPILSNVINYDFPSQSKIFVHRVGRTARAGRTGWSYSLIRESDAPYLLDLQLFLGRP 482
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LDADME-GIQK-TCNNAYK 177
+L S + +D + G + QG DQ+S WV LD D++ +Q+ K
Sbjct: 483 LILGRASSQPVNYAEDVVVGSL-QG---DQVSRYCEWVSKLLDEDVDVALQREVAMKGEK 538
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ KEL + M VHPLF + E+E+ +L ++ Y+P T+
Sbjct: 539 LYMRTRNSASSESAKRAKELVGSDEWMMVHPLFNDESSRIEEEREKMLARLGGYKPQETI 598
Query: 235 LEFGKARFIIIN 246
E G R +++
Sbjct: 599 FEIGGRRGGVVD 610
>gi|297842471|ref|XP_002889117.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
gi|297334958|gb|EFH65376.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
Length = 834
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 153/249 (61%), Gaps = 16/249 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+V+ + L I + Y D+D ARKI+ ++F+ K +L+VTD+AAR
Sbjct: 274 TLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAAR 333
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD VIN++FP + K+FVHRVGR ARAGR+G AYS V+ +++ Y LDL LFL +
Sbjct: 334 GIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGSAYSFVTPEDVPYMLDLHLFLSKP 393
Query: 121 -KPVLADDSMKGKIRH---------QDG--MFGKIPQGLMEDQISEIMNWVELDADMEGI 168
+P +D + + G ++G+ PQ ++ + ++ A+++ +
Sbjct: 394 VRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRFPQKTIDLIFNRTREMIDSSAELDSL 453
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSE 227
++T A++ Y K++P S ES+++ K+L + HP+FR+ I + E E + K+
Sbjct: 454 ERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGL--HPIFRSIIETGELEAMSFFQKIKN 511
Query: 228 YRPPSTVLE 236
+RP T+LE
Sbjct: 512 FRPKQTILE 520
>gi|346977175|gb|EGY20627.1| ATP-dependent RNA helicase DBP10 [Verticillium dahliae VdLs.17]
Length = 899
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 150/242 (61%), Gaps = 4/242 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ +L +AG + +Y+Y LD AR+I+ F+ G+ +LVVTDVAAR
Sbjct: 364 TIIFAATKHHVEYLANLLRVAGFAVSYVYGALDQEARRIHTENFRNGRSNILVVTDVAAR 423
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AYS+V + Y LDL LFLGRK
Sbjct: 424 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYSIVRELDAPYLLDLQLFLGRK 483
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ +S + +++ + G +P+ +E + + + D+E ++ A K Y+K
Sbjct: 484 MVVGRES-ESPSYNEEVVVGALPRNRIEVHMEWLAKVLGDHEDIEATRRVSVKAEKLYLK 542
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAE-QEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S ++ +E A Q+HPLF + + Q + L+ K+S YRP T+ E
Sbjct: 543 TRNSASSQSARRARETVGSKAWSQLHPLFDEVKDDDAQARAELMAKVSGYRPHETIFEIS 602
Query: 239 KA 240
+
Sbjct: 603 RG 604
>gi|449295671|gb|EMC91692.1| hypothetical protein BAUCODRAFT_301346 [Baudoinia compniacensis
UAMH 10762]
Length = 909
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 149/247 (60%), Gaps = 15/247 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HV+Y+ +L +++Y+Y LD TARK+ F++G +LVVTDVAAR
Sbjct: 358 TVVFAATKHHVDYLAALLKAHNYATSYVYGSLDQTARKMQVQDFRSGFTNILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+FP + K+FVHRVGR ARAG++G +YSLV+ ++ Y LDL LFL RK
Sbjct: 418 GLDIPILANVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLVTGQDMPYLLDLQLFLSRK 477
Query: 122 PVLADDSMKGKIRHQDGMF------GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
VL G+ + MF G + +E E ++ D D+ +++
Sbjct: 478 LVL------GRANRESDMFSSAIVVGALTTSQLERCCEETAKLIDDDTDLAAMREVAGKG 531
Query: 176 YKKYVKSRPGASVESVKKVKELE-LATMQVHPLFRNIGSA--EQEKFNLLTKMSEYRPPS 232
K+Y+++R AS ESVK+ K++ + ++ LF A EQ + ++L ++S +RP
Sbjct: 532 EKQYLRTRNAASAESVKRAKQIAGDGVIGINMLFGEDDGADIEQRRIDMLARVSGFRPQE 591
Query: 233 TVLEFGK 239
TV E G+
Sbjct: 592 TVFEIGR 598
>gi|407926601|gb|EKG19568.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 913
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 147/249 (59%), Gaps = 20/249 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVE++ +L AG S +Y+Y LD TARK+ F+TG +LVVTDVAAR
Sbjct: 371 TIIFAATKHHVEFLAALLRSAGYSVSYVYGSLDQTARKMQVHAFRTGMSNILVVTDVAAR 430
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+F+HRVGR ARAG+ G AYSLV +L Y LDL LFL RK
Sbjct: 431 GIDIPILANVINFDFPAQPKIFIHRVGRTARAGKKGWAYSLVRDSDLPYLLDLQLFLSRK 490
Query: 122 PVLADDSMKGKIRHQDGMFG----KIPQGLMEDQISEIMNWV----ELDADMEGIQKTCN 173
VL DG F + G + D+++ WV + D D+ ++ +
Sbjct: 491 LVLG---------RTDGDFSFANDVVVGGFVRDKLARACEWVNKLLDDDEDLSNLRIVAS 541
Query: 174 NAYKKYVKSRPGASVESVKKVKELEL--ATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRP 230
K Y+++R AS ES K+ KE+ A ++ LF ++ E E+ +L ++S +RP
Sbjct: 542 KGEKLYMRTRNSASSESAKRAKEISTTEAFSELSMLFNDDVDKVEVEREKMLARISGFRP 601
Query: 231 PSTVLEFGK 239
TV E GK
Sbjct: 602 QETVFEIGK 610
>gi|268553635|ref|XP_002634804.1| Hypothetical protein CBG13909 [Caenorhabditis briggsae]
Length = 845
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 11/246 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF AT HVEYV IL AGI +++YS LD TARK N KF + +LVVTDVAA
Sbjct: 293 QTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKQNIQKFHEKQNNILVVTDVAA 352
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN +FP KAKL+VHRVGR ARAGRSG A SL+++DEL Y DL +FLG+
Sbjct: 353 RGVDIPLLDTVINLHFPSKAKLYVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGK 412
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-ELDADMEGIQKTCNNAYKKY 179
A D + + + + G++P ++ + +E N + + + +M +++ NA KY
Sbjct: 413 PIKFATDG--SEYKEDETLIGRVPDSIVSLE-TEFFNSIHDNNEEMIDLRQKATNAMMKY 469
Query: 180 VKSRPGASVESVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVL 235
++R S ES ++VK+ ++ T V HP + G +++ ++L ++S Y+ +T+
Sbjct: 470 TRTRQPPSAESARRVKQ-DIRTDSVECAPHPFLKADG--DKQSNDILNRISAYKSRNTIF 526
Query: 236 EFGKAR 241
E K++
Sbjct: 527 EMNKSQ 532
>gi|291001325|ref|XP_002683229.1| ATP-dependent dead box RNA helicase [Naegleria gruberi]
gi|284096858|gb|EFC50485.1| ATP-dependent dead box RNA helicase [Naegleria gruberi]
Length = 892
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 147/255 (57%), Gaps = 21/255 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++H EY + I +T +Y +D AR N KF+ G+ +L+VTDVAAR
Sbjct: 285 TIIFIPTRHHAEYFLTLFTHYKIEATVVYGSMDQQARMENLDKFRNGEANILLVTDVAAR 344
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP ++ VINYNFP K KLFVHRVGR RAG+ G AYSL++ DE+ ++LDL LFLGRK
Sbjct: 345 GIDIPDVNNVINYNFPGKPKLFVHRVGRVGRAGKVGTAYSLIAPDEVPFFLDLELFLGRK 404
Query: 122 P----------------VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADM 165
V AD S + DG G IPQ +++ +I + + +D +
Sbjct: 405 SRNVVMETIYEDEDSRQVPADLSGRNWREFIDGYIGIIPQSILDREIEHLAHLERIDGGL 464
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFR---NIGSAEQEKFNLL 222
++ C+ A Y ++R S S+ + KEL T+ +HP+ + I E+E+ +++
Sbjct: 465 LNEKEVCDRALTLYNRTRGDPSGASIGRSKELH--TLAIHPMIKVLEVITDEEEEQHDII 522
Query: 223 TKMSEYRPPSTVLEF 237
+M +YRP T+ EF
Sbjct: 523 AQMKDYRPGQTIFEF 537
>gi|302406797|ref|XP_003001234.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
gi|261359741|gb|EEY22169.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
Length = 902
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 150/242 (61%), Gaps = 4/242 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HVEY+ +L +AG + +Y+Y LD AR+I+ F+ G+ +LVVTDVAAR
Sbjct: 364 TIIFAATKHHVEYLANLLRVAGFAVSYVYGALDQEARRIHTENFRNGRSNILVVTDVAAR 423
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AYS+V + Y LDL LFLGRK
Sbjct: 424 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYSIVRELDAPYLLDLQLFLGRK 483
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ +S + +++ + G +P+ +E + + + D+E ++ A K Y+K
Sbjct: 484 MVVGRES-ESPSYNEEVVVGALPRNRIEVHMEWLAKVLGDHEDIEATRRVSVKAEKLYLK 542
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAE-QEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S ++ +E A Q+HPLF + + Q + L+ K+S YRP T+ E
Sbjct: 543 TRNSASSQSARRARETVGSKAWSQLHPLFDEVKDDDAQARAELMAKVSGYRPHETIFEIS 602
Query: 239 KA 240
+
Sbjct: 603 RG 604
>gi|302895429|ref|XP_003046595.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727522|gb|EEU40882.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 897
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 147/240 (61%), Gaps = 4/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG + +Y+Y LD AR++ F+ GK +LVVTDVAAR
Sbjct: 361 TIIFTATKHHVEYLANLLIEAGFAVSYVYGSLDQVARRMQVEDFRRGKTNILVVTDVAAR 420
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLG+K
Sbjct: 421 GIDIPVLANVINFDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGKK 480
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ ++ D + G + + +E + + + D+ ++ A K Y+K
Sbjct: 481 LVIGQENTSPSF-ADDVVVGALKRDSVESHVEWFNKVLHDNDDVSALRGVAVKAEKLYLK 539
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R A+ +S K+ +EL Q+HPLF ++ AEQ + ++L ++S +RP T+ E G
Sbjct: 540 TRNSAASQSAKRARELVGSQGWTQLHPLFGEDVDGAEQARADMLARISGFRPQETIFEVG 599
>gi|296806549|ref|XP_002844084.1| ATP-dependent RNA helicase DBP10 [Arthroderma otae CBS 113480]
gi|238845386|gb|EEQ35048.1| ATP-dependent RNA helicase DBP10 [Arthroderma otae CBS 113480]
Length = 930
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 367 TIVFVATKHHVEYIATLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAG+ G +YSL+ + Y +DL LFLGR+
Sbjct: 427 GIDIPVLANVINYDFPSQPKIFIHRVGRTARAGQKGWSYSLIRDSDAPYLIDLQLFLGRQ 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y+K
Sbjct: 487 LLMGRAATENANYAEDIVVGSLPRRSLESHCEYVDKLLSEDVDIEGLRSVSIRGEKLYMK 546
Query: 182 SRPGASVESVKKVKELELATM--QVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 547 TRNSASAESAKRAKDIVAADAWGTMHPLFNDESSRLEAEREQMLARVGGYKPQETVFE 604
>gi|324503749|gb|ADY41623.1| ATP-dependent RNA helicase DDX54 [Ascaris suum]
Length = 799
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 146/244 (59%), Gaps = 14/244 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
MT+VF AT HVEY+ + A I +YS LD ARKIN +F++ + +L+VTDVAA
Sbjct: 281 MTIVFCATMKHVEYLAAVAQRAAIDCVVLYSQLDAAARKINIERFRSKQCLLLIVTDVAA 340
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD IN++FP KAKLFVHRVGR ARAG+SG +YSL+S+DEL Y DL LFLGR
Sbjct: 341 RGVDIPLLDNAINFHFPPKAKLFVHRVGRVARAGKSGKSYSLISADELPYLADLFLFLGR 400
Query: 121 KPVLAD-DSMKGKIRHQDGMFGKIPQGLME---DQISEIMNWVELDADMEGIQKTCNNAY 176
A DS+ R + + G L+E D + I + E +M ++K NA
Sbjct: 401 PLNFAKPDSI---YREDEPLVGVFTDDLVELESDFLRAIHDNCE---EMADLRKKSENAM 454
Query: 177 KKYVKSRPGASVESVKKVK-ELE--LATMQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPS 232
KY ++RP S ESV++ K EL A HP+ R+ E + N L ++ ++P +
Sbjct: 455 SKYSRTRPQPSAESVRRTKTELREAFAAASPHPILRRDAAPVEDARLNFLQELHSFKPHT 514
Query: 233 TVLE 236
T+ E
Sbjct: 515 TIFE 518
>gi|325094395|gb|EGC47705.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus H88]
Length = 941
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL +G + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLTSILRTSGFAVSYAYGSLDQTARKIEVQNFRAGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLIRESDTPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW----VELDADMEGIQKTCNNAYK 177
+L S + ++ + G +P+ D+++ W ++ D D+E ++ K
Sbjct: 487 LILGRGSGQQLNYAENVVVGSLPR----DKVARYTEWMTKLLDEDVDVELQREVAMKGEK 542
Query: 178 KYVKSRPGASVESVKKVKE-LELAT-MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K +E A M VHPLF + S E+++ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASGESAKRAKAVVESAEWMMVHPLFNDESSRLEEQRDKMLARVGGYKPQETI 602
Query: 235 LEFGKAR 241
E R
Sbjct: 603 FEISGRR 609
>gi|298708839|emb|CBJ30797.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 819
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 152/279 (54%), Gaps = 44/279 (15%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
MT+VF AT++H E++H++L AG +S+ +Y +D AR I+ KF+ GK ++LVVTDVAA
Sbjct: 255 MTIVFVATRHHAEFLHELLKEAGTASSVVYGAMDQEARSIHLDKFRKGKTKLLVVTDVAA 314
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ VINY FP KLFVHRVGR AR GR+G AYS+V +E+ + LDL LFLGR
Sbjct: 315 RGIDVPLLNNVINYAFPPAPKLFVHRVGRAARQGRTGTAYSIVDPEEIPHMLDLHLFLGR 374
Query: 121 KPVLADDSMKG----------------KIRHQDG------------------MFGKIPQG 146
KP + KG Q+G +G PQ
Sbjct: 375 KPTNVYTAPKGPGPDGATVDGVGAGGGDAEEQEGERGAIVGYDVSELNPDLVHYGNFPQQ 434
Query: 147 LMEDQISEIMNWV-ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVH 205
+M+D+ + + +++ G+++ C NA K+Y ++RP S ++ + K L+ + H
Sbjct: 435 VMDDENESLKEMLGNSGSNLSGLERVCQNAMKQYRRTRPDPSGRAIARAKLLDRG--ETH 492
Query: 206 PLF-----RNIGSAEQE--KFNLLTKMSEYRPPSTVLEF 237
PL R + SA + + MS +RP T+ E
Sbjct: 493 PLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFEL 531
>gi|240275043|gb|EER38558.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus H143]
Length = 941
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL +G + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLTSILRTSGFAVSYAYGSLDQTARKIEVQNFRAGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLIRESDTPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW----VELDADMEGIQKTCNNAYK 177
+L S + ++ + G +P+ D+++ W ++ D D+E ++ K
Sbjct: 487 LILGRGSGQQLNYAENVVVGSLPR----DKVARYTEWMTKLLDEDVDVELQREVAMKGEK 542
Query: 178 KYVKSRPGASVESVKKVKE-LELAT-MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K +E A M VHPLF + S E+++ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASGESAKRAKAVVESAEWMMVHPLFNDESSRLEEQRDKMLARVGGYKPQETI 602
Query: 235 LEFGKAR 241
E R
Sbjct: 603 FEISGRR 609
>gi|389644026|ref|XP_003719645.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
gi|152013475|sp|A4R5B8.1|DBP10_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP10
gi|351639414|gb|EHA47278.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
Length = 914
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 145/240 (60%), Gaps = 3/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ IL AG + ++ Y LD TARKI F+ GK +LVVTDVAAR
Sbjct: 368 TIIFTATKFHVEYLTSILVQAGYAVSHAYGALDQTARKIQVEDFRRGKTNILVVTDVAAR 427
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+F + K+FVHRVGR ARAG+ G +YSLVS + Y LDL LFLGR+
Sbjct: 428 GIDIPVLANVINYDFCDQPKVFVHRVGRTARAGQKGWSYSLVSDIDAPYLLDLQLFLGRR 487
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ D+ G D + G + + +E + + V+ D+ ++ A K+Y++
Sbjct: 488 LVVGQDTSAGANFASDVVLGALQRNSIETNVEWVEKVVQESHDIALMRSVVVKAQKQYLR 547
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +EL A Q H +F N E + +L K+S ++P TV E G
Sbjct: 548 TRVSASSQSAKRARELTASRAWSQPHLIFGINTDDTEALRVEMLAKISGFKPQETVFEIG 607
>gi|302506487|ref|XP_003015200.1| hypothetical protein ARB_06323 [Arthroderma benhamiae CBS 112371]
gi|291178772|gb|EFE34560.1| hypothetical protein ARB_06323 [Arthroderma benhamiae CBS 112371]
Length = 940
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 145/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 378 TIVFVATKHHVEYIANLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LFLGR+
Sbjct: 438 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFLGRR 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 498 LLMGRTATENANYAEDIVVGSLPRKSLESHCEYVDKLLSDDIDIEGLRSVSIRGEKLYMR 557
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A + +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 558 TRNSASAESAKRAKDIVAADAWVTIHPLFNDESSRLEVEREQMLARVGGYKPQETVFE 615
>gi|326473025|gb|EGD97034.1| ATP-dependent RNA helicase DBP10 [Trichophyton tonsurans CBS
112818]
Length = 941
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 145/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 379 TIVFVATKHHVEYIANLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 438
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LFLGR+
Sbjct: 439 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFLGRQ 498
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 499 LLMGRTATENANYAEDIVVGSLPRKSLESHCEYVDKLLSDDVDIEGLRSVSIRGEKLYMR 558
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A + +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 559 TRNSASAESAKRAKDIVAADAWVTIHPLFNDESSRLEVEREQMLARVGGYKPQETVFE 616
>gi|440472202|gb|ELQ41079.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae Y34]
gi|440478179|gb|ELQ59033.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae P131]
Length = 880
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 145/240 (60%), Gaps = 3/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ IL AG + ++ Y LD TARKI F+ GK +LVVTDVAAR
Sbjct: 334 TIIFTATKFHVEYLTSILVQAGYAVSHAYGALDQTARKIQVEDFRRGKTNILVVTDVAAR 393
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+F + K+FVHRVGR ARAG+ G +YSLVS + Y LDL LFLGR+
Sbjct: 394 GIDIPVLANVINYDFCDQPKVFVHRVGRTARAGQKGWSYSLVSDIDAPYLLDLQLFLGRR 453
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ D+ G D + G + + +E + + V+ D+ ++ A K+Y++
Sbjct: 454 LVVGQDTSAGANFASDVVLGALQRNSIETNVEWVEKVVQESHDIALMRSVVVKAQKQYLR 513
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +S K+ +EL A Q H +F N E + +L K+S ++P TV E G
Sbjct: 514 TRVSASSQSAKRARELTASRAWSQPHLIFGINTDDTEALRVEMLAKISGFKPQETVFEIG 573
>gi|154286484|ref|XP_001544037.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|160380603|sp|A6QUM7.1|DBP10_AJECN RecName: Full=ATP-dependent RNA helicase DBP10
gi|150407678|gb|EDN03219.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 900
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL +G + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLTSILRTSGFAVSYAYGSLDQTARKIEVQNFRDGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLIRESDTPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW----VELDADMEGIQKTCNNAYK 177
+L S + ++ + G +P+ D+++ W ++ D D+E ++ K
Sbjct: 487 LILGRGSGQQLNYAENVVVGSLPR----DKVARYTEWMTKLLDEDVDIELQREVAIKGEK 542
Query: 178 KYVKSRPGASVESVKKVKE-LELAT-MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K +E A M VHPLF + S E+++ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASGESAKRAKAVVESAEWMMVHPLFNDESSRLEEQREKMLARVGGYKPQETI 602
Query: 235 LEFGKAR 241
E R
Sbjct: 603 FEISGRR 609
>gi|256074321|ref|XP_002573474.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228911|emb|CCD75082.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 829
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 5/217 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF ATK+HVE +L G T I+S LDP+AR + KF++ RVL+VTDVAARG
Sbjct: 275 VVFFATKHHVESFQMLLTDLGFGCTCIHSGLDPSARNLALKKFRSRTARVLLVTDVAARG 334
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP LD VIN++FP + KLF+HRVGR ARAGR GVAYSLV +EL Y LD+ +FLG++
Sbjct: 335 VDIPHLDNVINFHFPAQPKLFLHRVGRVARAGRRGVAYSLVDPEELPYLLDVFMFLGKEW 394
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+ S K ++ + G+ P+ +M + I + ++ +E ++K C NA K+Y+++
Sbjct: 395 KVCQSSNK-QVEWESDCVGRAPRSIMSSLAARIESISSENSSLESMKKVCVNAMKRYLQT 453
Query: 183 RPGASVESVKKVKELELA--TMQVHPLFRNIGSAEQE 217
RP AS ES+++ K+L A ++ VH +F N SAE+E
Sbjct: 454 RPNASWESIRRAKDLRDAHFSLPVHQIFDN--SAEKE 488
>gi|225558604|gb|EEH06888.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus G186AR]
Length = 940
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 149/247 (60%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL +G + +Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 369 TIIFTATKHHVDYLTSILRTSGFAVSYAYGSLDQTARKIEVQNFRAGITHILVVTDVAAR 428
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 429 GIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLIRESDTPYLLDLQLFLGRP 488
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW----VELDADMEGIQKTCNNAYK 177
+L S ++ + G +P+ D+++ W ++ D D+E ++ K
Sbjct: 489 LILGRGSGHQLNYAENVVVGSLPR----DKVARYTEWMTKLLDEDVDVELQREVAMKGEK 544
Query: 178 KYVKSRPGASVESVKKVKE-LELAT-MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K +E A M VHPLF + S E+++ +L ++ Y+P T+
Sbjct: 545 LYMRTRNSASGESAKRAKAVVESAEWMMVHPLFNDESSRLEEQREKMLARVGGYKPQETI 604
Query: 235 LEFGKAR 241
E R
Sbjct: 605 FEISGRR 611
>gi|258573243|ref|XP_002540803.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901069|gb|EEP75470.1| predicted protein [Uncinocarpus reesii 1704]
Length = 937
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 5/244 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y+ IL +G + Y Y LD TARKI F+ G +LVVTDVAAR
Sbjct: 374 TIVFVATKHHVDYIASILRESGFAVAYAYGSLDQTARKIQVNNFRAGISNILVVTDVAAR 433
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 434 GIDIPVLANVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDSDAPYLLDLQLFLGRR 493
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ +S + D + G I + + + ++ D D++ ++ K Y++
Sbjct: 494 LIMGRNSKEAPNFADDVVVGSIARDGLARHCEWVSKLLDEDIDIQSQREVAMKGEKLYMR 553
Query: 182 SRPGASVESVKKVKEL---ELATMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLEF 237
+R AS ES K+ K++ + TM +HPLF + S E E+ +L ++ Y+P T+ E
Sbjct: 554 TRNSASTESAKRSKDVVGSDEWTM-LHPLFNDEASQMEVEREKMLARIGGYKPQETIFEI 612
Query: 238 GKAR 241
R
Sbjct: 613 SGRR 616
>gi|327304757|ref|XP_003237070.1| ATP-dependent RNA helicase DBP10 [Trichophyton rubrum CBS 118892]
gi|326460068|gb|EGD85521.1| ATP-dependent RNA helicase DBP10 [Trichophyton rubrum CBS 118892]
Length = 940
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 145/239 (60%), Gaps = 3/239 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 378 TIVFVATKHHVEYIAHLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LFLGR+
Sbjct: 438 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFLGRR 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 498 LLMGRTATENVNYAEDIVVGSLPRKSLESHCEYVDKLLSDDIDIEGLRSVSIRGEKLYMR 557
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLEF 237
+R AS ES K+ K++ A + +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 558 TRNSASAESAKRAKDIVAADAWVTIHPLFNDESSRLEVEREQMLARVGGYKPQETVFEI 616
>gi|261193383|ref|XP_002623097.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis
SLH14081]
gi|239588702|gb|EEQ71345.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis
SLH14081]
Length = 945
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 151/242 (62%), Gaps = 11/242 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL ++G + +Y Y LD TARKI F++G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLVSILRISGFAVSYAYGSLDQTARKIEVQNFRSGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILSNVINYDFPSQAKIFVHRVGRTARAGKTGWSYSLIRESDAPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
+L S + +D + G +P+ D++S WV + D D+E ++ K
Sbjct: 487 LILGRGSGQQLNYTEDVVVGSLPR----DKVSRYTEWVSKLLDEDVDVELQREVAMKGEK 542
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K++ + + VHP+F + E+E+ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASSESAKRAKDVVESDEWLMVHPIFSDESSRLEEEREKMLARVGGYKPQETI 602
Query: 235 LE 236
E
Sbjct: 603 FE 604
>gi|159490042|ref|XP_001702998.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270905|gb|EDO96736.1| predicted protein [Chlamydomonas reinhardtii]
Length = 485
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 140/227 (61%), Gaps = 21/227 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FTAT++H E+++ +L G+ + ++ +D TARKI+ AKF+ G+ +LV TDVAA
Sbjct: 257 LTILFTATRHHAEFLYTLLLKEGVDAACVFGSMDQTARKIHVAKFRAGRSHLLVTTDVAA 316
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP +D VIN++FP K +LFVHRVGR ARAGRSG AYSL++ +EL Y LDL L+L R
Sbjct: 317 RGIDIPLIDNVINFDFPPKPELFVHRVGRAARAGRSGTAYSLLTREELPYLLDLHLYLSR 376
Query: 121 ----KPVLADDSMKG---------------KIRHQDGMFGKIPQGLMEDQISEIMNWVEL 161
P++ D G + ++G +P +++ I + V+
Sbjct: 377 DVKPAPLVPDMPAPGSAAEGADAAALAAAATSSSSESVYGSLPAVVLDPLIEHVREQVQA 436
Query: 162 DADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF 208
AD+EG+ +T NA+ Y K+RP AS +SV++ + L VHP+
Sbjct: 437 SADLEGMLRTLTNAWSMYCKTRPQASAQSVRRAR--ALTKEGVHPML 481
>gi|402593242|gb|EJW87169.1| DEAD/DEAH box helicase, partial [Wuchereria bancrofti]
Length = 746
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 136/239 (56%), Gaps = 6/239 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF AT HVEY+ + G AGI +YS LD AR IN KF+ + +L+VTD+AA
Sbjct: 238 QTVVFCATMKHVEYLAAVTGKAGIDCVVLYSQLDSVARNINIQKFRKKECSLLIVTDIAA 297
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD INY+FP K KLFVHRVGR ARAGRSG A SL +DE+ Y +DL LFL R
Sbjct: 298 RGVDIPLLDVAINYHFPSKPKLFVHRVGRVARAGRSGKAISLFGADEVPYVIDLFLFLNR 357
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
S + + G P G+++ +I + N + +++ + K NA +KY
Sbjct: 358 PLKF---STTSSVNSDEASIGIFPDGIIDREIDFLKNVHDNSDELDDLLKKSENAMQKYK 414
Query: 181 KSRPGASVESVKKVKE---LELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
K+RP S ESV++ K+ L VHP + E + + L + ++ +T+ E
Sbjct: 415 KTRPQPSAESVRRAKDEVKEALFKASVHPFLQQESPEEAVRQSFLRDLHNFKSTATIFE 473
>gi|449449653|ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Cucumis sativus]
Length = 789
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 154/251 (61%), Gaps = 18/251 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++F +T++HVE+++ + GI + Y ++D ARKI+ ++F+ + L+VTDVAA
Sbjct: 274 QSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARRTMFLIVTDVAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN++FP K K+FVHRVGR ARAGR+G A+S V+S++L LDL LFL
Sbjct: 334 RGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLPNLLDLHLFLS- 392
Query: 121 KPVLADDSMKGKIRHQDGMF--------------GKIPQGLMEDQISEIMNWVELDADME 166
KP+ A + + + ++G+F G++PQ +++ I ++ AD+
Sbjct: 393 KPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLASDRIRETIDSSADLI 452
Query: 167 GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKM 225
+QKTC+NA++ Y KS+P S ES+++ K+L + HP+F+ + E ++
Sbjct: 453 SLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGL--HPIFKTALEGGELMALAFSERL 510
Query: 226 SEYRPPSTVLE 236
+RP T+LE
Sbjct: 511 KTFRPKQTILE 521
>gi|449511783|ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Cucumis sativus]
Length = 789
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 154/251 (61%), Gaps = 18/251 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++F +T++HVE+++ + GI + Y ++D ARKI+ ++F+ + L+VTDVAA
Sbjct: 274 QSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARRTMFLIVTDVAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VIN++FP K K+FVHRVGR ARAGR+G A+S V+S++L LDL LFL
Sbjct: 334 RGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLPNLLDLHLFLS- 392
Query: 121 KPVLADDSMKGKIRHQDGMF--------------GKIPQGLMEDQISEIMNWVELDADME 166
KP+ A + + + ++G+F G++PQ +++ I ++ AD+
Sbjct: 393 KPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLASDRIRETIDSSADLI 452
Query: 167 GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKM 225
+QKTC+NA++ Y KS+P S ES+++ K+L + HP+F+ + E ++
Sbjct: 453 SLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGL--HPIFKTALEGGELMALAFSERL 510
Query: 226 SEYRPPSTVLE 236
+RP T+LE
Sbjct: 511 KTFRPKQTILE 521
>gi|302665674|ref|XP_003024446.1| hypothetical protein TRV_01409 [Trichophyton verrucosum HKI 0517]
gi|291188499|gb|EFE43835.1| hypothetical protein TRV_01409 [Trichophyton verrucosum HKI 0517]
Length = 940
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI + G +LVVTDVAAR
Sbjct: 378 TIVFVATKHHVEYIANLLRHSGFAVSYAYGSLNQTARKIQVQNLRAGISNILVVTDVAAR 437
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LFLGR+
Sbjct: 438 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFLGRR 497
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 498 LLMGRTATENANYAEDIVVGSLPRKSLESHCEYVDKLLSDDVDIEGLRSVSIRGEKLYMR 557
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A + +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 558 TRNSASAESAKRAKDIVAADAWVTIHPLFNDESSRLEVEREQMLARVGGYKPQETVFE 615
>gi|239613976|gb|EEQ90963.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis ER-3]
Length = 945
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 151/242 (62%), Gaps = 11/242 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL ++G + +Y Y LD TARKI F++G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLVSILRISGFAVSYAYGSLDQTARKIEVQNFRSGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILSNVINYDFPSQAKIFVHRVGRTARAGKTGWSYSLIRESDAPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
+L S + +D + G +P+ D++S WV + D D+E ++ K
Sbjct: 487 LLLGRGSGQQLNYTEDVVVGSLPR----DKVSRYTEWVSKLLDEDVDVELQREVAMKGEK 542
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K++ + + VHP+F + E+E+ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASSESAKRAKDVVESDEWLMVHPIFSDESSRLEEEREKMLARVGGYKPQETI 602
Query: 235 LE 236
E
Sbjct: 603 FE 604
>gi|157121423|ref|XP_001659898.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108874627|gb|EAT38852.1| AAEL009285-PA [Aedes aegypti]
Length = 784
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 151/262 (57%), Gaps = 36/262 (13%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F T++HVE + IL AGI +TY++S LD +ARKIN AKF K+ VLVVTD+AAR
Sbjct: 283 TVLFAGTQHHVELISLILTRAGIPNTYVFSSLDASARKINTAKFTMKKVNVLVVTDIAAR 342
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPSLD V+N +FP K KLFVHRVGRCARAGRSG AY++ S+D++ + +DL +FL R
Sbjct: 343 GLDIPSLDYVVNVHFPGKPKLFVHRVGRCARAGRSGTAYNIFSNDDIAHMIDLHMFLTRP 402
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL+D G P ++E + ++++V+ D+ + NNAYK+Y+
Sbjct: 403 LVLSDAR----------CIGVAPPDMVEAEHQLVLDYVK-HIDLATAFRISNNAYKQYIV 451
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQE------------------------ 217
+RP AS + KK K+ ++ +QV F + E
Sbjct: 452 TRPAASASANKKAKQFKIGELQVLEDFGKVMEKLDEDKKADKQKKADAAQKKQSTVNPDE 511
Query: 218 -KFNLLTKMSEYRPPSTVLEFG 238
+ + L +M YRP ST+ E
Sbjct: 512 FRSSFLAQMKNYRPQSTIFELN 533
>gi|412993031|emb|CCO16564.1| predicted protein [Bathycoccus prasinos]
Length = 910
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 152/266 (57%), Gaps = 37/266 (13%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF +T++HVE++ +L G S I+ +D ARKI A F++GK V+VVTDVAAR
Sbjct: 316 TVVFASTRHHVEHLETLLKKEGHSCVSIFGAMDFAARKIALATFKSGKANVMVVTDVAAR 375
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P LD VINY+FP AKLFVHRVGR ARAGR G+A+S++ +EL Y +DL LFLGRK
Sbjct: 376 GIDVPLLDNVINYDFPANAKLFVHRVGRVARAGRKGIAHSILVKEELGYVVDLHLFLGRK 435
Query: 122 PVLAD------------DSMKGKIRHQDGMFGKIPQG---LMEDQISEIMNWVELDADME 166
AD + +G +++ + G P G L+ D++ E+ E ++E
Sbjct: 436 IKPADIVPPQNEEEAEKRAREGDA-NEESVVGTFPIGSLDLLADRVRELH---ETHIELE 491
Query: 167 GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF--------RNIGSA---- 214
+QKT NAYK Y K+R AS ESV + K L HPLF N G
Sbjct: 492 ALQKTTVNAYKAYQKTRIPASSESVARAK--PLIECGPHPLFCAAIFRKASNAGGTANTT 549
Query: 215 ----EQEKFNLLTKMSEYRPPSTVLE 236
+E L+ M YRP +TVLE
Sbjct: 550 TYKNAKELAELMRGMKNYRPHATVLE 575
>gi|170590083|ref|XP_001899802.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158592721|gb|EDP31318.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 782
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 137/239 (57%), Gaps = 6/239 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF AT HVEY+ + G AGI +YS LD AR IN KF+ + +L+VTD+AA
Sbjct: 274 QTIVFCATMKHVEYLAAVAGKAGIDCVVLYSQLDSVARNINIQKFRKKECSLLIVTDIAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD INY+FP K KLFVHRVGR ARAGRSG A SL +DE+ Y +DL LFL R
Sbjct: 334 RGVDIPLLDVAINYHFPSKPKLFVHRVGRVARAGRSGKAISLFGADEVPYVIDLFLFLNR 393
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A S + + + G P G+++ +I + N + +++ + K NA +KY
Sbjct: 394 PLKFATTS---SVSSDEALIGIFPDGIIDREIDFLKNVHDNSDELDDLLKKSENAMQKYK 450
Query: 181 KSRPGASVESVKKVKE---LELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
K+RP S ESV++ K+ L VHP + E + L + ++ +T+ E
Sbjct: 451 KTRPQPSAESVRRAKDEVKEALFKASVHPFLQQESPEEAVRQLFLRDLHNFKSTTTIFE 509
>gi|384252494|gb|EIE25970.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 806
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 151/250 (60%), Gaps = 17/250 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTAT++HVE++H +L G+ S +Y +D AR+I++ KF+ G++ +L+VTDVAAR
Sbjct: 290 TLIFTATRHHVEFLHTLLTREGLRSACVYGQMDQAARRIHSGKFRAGQVNILIVTDVAAR 349
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD VINY+FP + KLFVHR GR ARAGRSG AYSL + +EL Y LDL LFL R
Sbjct: 350 GIDIPLLDNVINYDFPARPKLFVHRAGRAARAGRSGTAYSLFTREELPYLLDLHLFLSRG 409
Query: 121 ---KPVLADDSMKGKIRHQD---GMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
PV + ++G PQ +ED + V ++++G+Q++C N
Sbjct: 410 VQPAPVASLAQAAAVAGGASSDVSLYGTFPQAALEDNAERVRAAVANASELQGLQRSCAN 469
Query: 175 AYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG--------SAEQEKFNLLTKMS 226
A+ Y ++RP AS ESV + + + A VHP A+++ N+ ++
Sbjct: 470 AWLLYKRTRPAASPESVTRARSMPAAG--VHPDLAAACPQSSLAGLEAQEDMANIAARLR 527
Query: 227 EYRPPSTVLE 236
YRP +TVLE
Sbjct: 528 AYRPSATVLE 537
>gi|326477276|gb|EGE01286.1| ATP-dependent RNA helicase DBP10 [Trichophyton equinum CBS 127.97]
Length = 941
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L +G + +Y Y L+ TARKI F+ G +LVVTDVAAR
Sbjct: 379 TIVFVATKHHVEYIANLLRHSGFAVSYAYGSLNQTARKIQVQNFRAGISNILVVTDVAAR 438
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+++HRVGR ARAG+ G +YSLV + Y +DL LF GR+
Sbjct: 439 GIDIPVLANVINYDFPSQPKIYIHRVGRTARAGQKGWSYSLVRDSDAPYLIDLQLFSGRQ 498
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ + + +D + G +P+ +E + + D D+EG++ K Y++
Sbjct: 499 LLMGRTATENANYAEDIVVGSLPRKSLESHCEYVDKLLSDDVDIEGLRSVSIRGEKLYMR 558
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS ES K+ K++ A + +HPLF + S E E+ +L ++ Y+P TV E
Sbjct: 559 TRNSASAESAKRAKDIVAADAWVTIHPLFNDESSRLEVEREQMLARVGGYKPQETVFE 616
>gi|425777534|gb|EKV15702.1| ATP dependent RNA helicase (Dbp10), putative [Penicillium digitatum
Pd1]
gi|425779558|gb|EKV17605.1| ATP dependent RNA helicase (Dbp10), putative [Penicillium digitatum
PHI26]
Length = 912
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 148/247 (59%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG +++Y Y LD TAR + F++G +LVVTDVAAR
Sbjct: 367 TIVFAATKHHVDYLYSLLVEAGFATSYAYGSLDQTARNHHVQNFRSGISNILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 427 GIDIPVLANVINYDFPSQPKIFIHRVGRTARAGQKGWSYSLVRDKDAPYLLDLQLFLGRR 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
VL +D + G +P+ + +S WV+ D D+ G ++ K
Sbjct: 487 LVLGRQYGTELNFAEDVVVGTLPR----EPVSRSCEWVQKVLDDDVDIYGQKQVSQKGEK 542
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ KE+ + ++HPLF + S E E+ ++L ++ YRP T+
Sbjct: 543 LYLRTRNSASAESAKRSKEVVSSDHWAEIHPLFNDATSEREVERESMLARIGGYRPHETI 602
Query: 235 LEFGKAR 241
E R
Sbjct: 603 FEANNRR 609
>gi|156049231|ref|XP_001590582.1| hypothetical protein SS1G_08322 [Sclerotinia sclerotiorum 1980]
gi|154692721|gb|EDN92459.1| hypothetical protein SS1G_08322 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 828
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 149/241 (61%), Gaps = 3/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L ++G + ++ Y LD TAR I F+TGK +LVVTDVAAR
Sbjct: 274 TIIFAATKHHVDYLASLLRMSGFAVSHAYGSLDQTARNIQVEDFRTGKSNILVVTDVAAR 333
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 334 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGRR 393
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L D +D + G + + +E + I + D D+ ++ K YVK
Sbjct: 394 LLLGRDCGDSPNYAEDVIVGALQRNEVESKSEWITKLLYDDDDLTALRNVAGKGEKLYVK 453
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRNI-GSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS ES K+ KE+ M++HPLF+++ AEQ + +L K+S +RP TV E G
Sbjct: 454 TRNSASSESAKRAKEVVASKGWMELHPLFKDVTNGAEQARLEMLAKISGFRPNETVFEIG 513
Query: 239 K 239
+
Sbjct: 514 Q 514
>gi|160380704|sp|A7ESL7.2|DBP10_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp10
Length = 920
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 149/241 (61%), Gaps = 3/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L ++G + ++ Y LD TAR I F+TGK +LVVTDVAAR
Sbjct: 366 TIIFAATKHHVDYLASLLRMSGFAVSHAYGSLDQTARNIQVEDFRTGKSNILVVTDVAAR 425
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 426 GIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGRR 485
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L D +D + G + + +E + I + D D+ ++ K YVK
Sbjct: 486 LLLGRDCGDSPNYAEDVIVGALQRNEVESKSEWITKLLYDDDDLTALRNVAGKGEKLYVK 545
Query: 182 SRPGASVESVKKVKEL--ELATMQVHPLFRNI-GSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS ES K+ KE+ M++HPLF+++ AEQ + +L K+S +RP TV E G
Sbjct: 546 TRNSASSESAKRAKEVVASKGWMELHPLFKDVTNGAEQARLEMLAKISGFRPNETVFEIG 605
Query: 239 K 239
+
Sbjct: 606 Q 606
>gi|327353326|gb|EGE82183.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis ATCC
18188]
Length = 945
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 151/242 (62%), Gaps = 11/242 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ IL ++G + +Y Y LD TARKI F++G +LVVTDVAAR
Sbjct: 367 TIIFTATKHHVDYLVSILRISGFAVSYAYGSLDQTARKIEVQNFRSGITHILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAG++G +YSL+ + Y LDL LFLGR
Sbjct: 427 GIDIPILFNVINYDFPSQAKIFVHRVGRTARAGKTGWSYSLIRESDAPYLLDLQLFLGRP 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
+L S + +D + G +P+ D++S WV + D D+E ++ K
Sbjct: 487 LILGRGSGQQLNYTEDVVVGSLPR----DKVSRYTEWVSKLLDEDVDVELQREVAMKGEK 542
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K++ + + VHP+F + E+E+ +L ++ Y+P T+
Sbjct: 543 LYMRTRNSASSESAKRAKDVVESDEWLMVHPIFSDESSRLEEEREKMLARVGGYKPQETI 602
Query: 235 LE 236
E
Sbjct: 603 FE 604
>gi|225680138|gb|EEH18422.1| ATP-dependent RNA helicase dbp10 [Paracoccidioides brasiliensis
Pb03]
Length = 934
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 151/242 (62%), Gaps = 11/242 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HV+Y+ +L +G + +Y Y LD TARKI F++G +LVVTDVAAR
Sbjct: 363 TIIFTATKHHVDYLTSVLRQSGFAVSYAYGSLDQTARKIEVQNFRSGITHILVVTDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP ++K+FVHRVGR ARAGR+G +YSL+ + Y LDL LFLGR
Sbjct: 423 GIDIPILSNVINYDFPSQSKIFVHRVGRTARAGRTGWSYSLIRESDAPYLLDLQLFLGR- 481
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LDADME-GIQKTCN-NAYK 177
P++ ++ + + + + + L DQ+S WV LD D++ +Q+ K
Sbjct: 482 PLILGRALGQPVNYAEDV---VVGSLQRDQVSRYCEWVSKLLDEDVDVALQREVAMKGEK 538
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ KEL + M VHPLF + E+E+ +L ++ Y+P T+
Sbjct: 539 LYMRTRNSASSESAKRAKELVGSDEWMMVHPLFNDESSRIEEEREKMLARLGGYKPQETI 598
Query: 235 LE 236
E
Sbjct: 599 FE 600
>gi|302832666|ref|XP_002947897.1| hypothetical protein VOLCADRAFT_103677 [Volvox carteri f.
nagariensis]
gi|300266699|gb|EFJ50885.1| hypothetical protein VOLCADRAFT_103677 [Volvox carteri f.
nagariensis]
Length = 1338
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 154/269 (57%), Gaps = 32/269 (11%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FTAT++H E+++ +L G+ + ++ +D TARKI+ AKF+ G+ +LV TDVAA
Sbjct: 336 LTILFTATRHHAEFLYNLLLKEGVDAACVFGSMDQTARKIHVAKFRGGRCHLLVTTDVAA 395
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP +D VIN++FP K +LFVHRVGR AR GRSG AYSL++ DEL Y LDL L+L R
Sbjct: 396 RGIDIPLIDNVINFDFPPKPELFVHRVGRAARMGRSGTAYSLLTRDELPYLLDLHLYLSR 455
Query: 121 K----PVLAD--------------DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELD 162
P++ + +D +G +P +++ I + V
Sbjct: 456 SVKPAPLVPEAGPLPADEAADAAALVAAAAANSEDSTYGTLPAVVLDPLIEHVREVVASA 515
Query: 163 ADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLL 222
AD++G+Q+T NA+ Y K+RP S +SV++ + LA VHPL + + K+ +
Sbjct: 516 ADLDGMQRTLANAWGMYCKTRPQPSAQSVRRAR--ALAKEGVHPLL--LALLPKTKYTQI 571
Query: 223 ----------TKMSEYRPPSTVLEFGKAR 241
++ +RP +TV E AR
Sbjct: 572 ENEVALAQFTERLKTFRPTATVFEAEIAR 600
>gi|170045492|ref|XP_001850341.1| ATP-dependent RNA helicase DDX54 [Culex quinquefasciatus]
gi|167868515|gb|EDS31898.1| ATP-dependent RNA helicase DDX54 [Culex quinquefasciatus]
Length = 793
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 152/283 (53%), Gaps = 50/283 (17%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF T++HVE + +L +GI T++YS LD +ARKIN AKF K+ VLVVTD+AARG
Sbjct: 284 VVFAGTQHHVELISLLLTKSGIPCTHVYSGLDASARKINTAKFTMKKVNVLVVTDIAARG 343
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP+LD V+N +FP K KLF+HRVGRCARAGRSG AY++ S+D++ + +DL +FL R P
Sbjct: 344 LDIPTLDYVVNVHFPGKPKLFIHRVGRCARAGRSGTAYNIFSNDDIAHMIDLHMFLTR-P 402
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+ DS G+ P +E + ++ ++ D+ + NNAYK+Y+ +
Sbjct: 403 LDVTDSRN---------MGRAPPEAVESEHQIVLERIK-HIDLATAFRVSNNAYKQYIVT 452
Query: 183 RPGASVESVKKVKELELATMQVHPLFRNIGSAEQE------------------------- 217
RP AS S KK K +++ ++V F E E
Sbjct: 453 RPAASASSNKKAKRFKISELKVLDEFAAAMEKENEAKKKDKLLGKKAKKQKKALTAKQEE 512
Query: 218 ----------KFNLLTKMSEYRPPSTVLEF----GKARFIIIN 246
+ + L +M YRP +T+ E R +I+N
Sbjct: 513 KKPAVDADEFRTSFLAQMKSYRPQTTIFELNPKSNAKRMLIMN 555
>gi|255956777|ref|XP_002569141.1| Pc21g21690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590852|emb|CAP97066.1| Pc21g21690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 913
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 150/249 (60%), Gaps = 15/249 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG +++Y Y LD TAR + F++G +LVVTDVAAR
Sbjct: 368 TIVFAATKHHVDYLYSLLVEAGFATSYAYGSLDQTARNHHVQNFRSGISNILVVTDVAAR 427
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+F+HRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 428 GIDIPVLANVINYDFPSQPKIFIHRVGRTARAGQKGWSYSLVRDKDAPYLLDLQLFLGRR 487
Query: 122 PVLADDSMKGKIRHQDGMFGK--IPQGLMEDQISEIMNWVE--LDADME--GIQKTCNNA 175
VL G+ D F + + L + IS WV+ LD D++ G ++
Sbjct: 488 LVL------GRQYGTDLNFAEDVVVGTLSREAISRSCEWVQKVLDDDVDIFGQKQVSQKG 541
Query: 176 YKKYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPS 232
K Y+++R AS ES K+ KE+ + ++HPLF + S E E+ ++L ++ YRP
Sbjct: 542 EKLYLRTRNSASAESAKRAKEVVSSDHWAEIHPLFNDATSQREVERESMLARIGGYRPHE 601
Query: 233 TVLEFGKAR 241
T+ E R
Sbjct: 602 TIFEANNRR 610
>gi|308805432|ref|XP_003080028.1| Predicted ATP-dependent RNA helicase FAL1, involved in rRNA
maturation, DEAD-box superfamily (ISS) [Ostreococcus
tauri]
gi|116058487|emb|CAL53676.1| Predicted ATP-dependent RNA helicase FAL1, involved in rRNA
maturation, DEAD-box superfamily (ISS) [Ostreococcus
tauri]
Length = 1222
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 151/263 (57%), Gaps = 22/263 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF +T++HVE++H +L G+ + IY +D ARK+ +KF+ K VL+VTDVAA
Sbjct: 687 QTVVFASTRHHVEWLHNLLEFEGVRVSSIYGSMDMMARKMALSKFRAKKADVLMVTDVAA 746
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP LD VINY+FP K KLFVHRVGR ARAGR+G A+S + +EL + +DL LFLGR
Sbjct: 747 RGIDIPLLDNVINYDFPSKGKLFVHRVGRVARAGRTGNAHSFLVKEELGFLVDLHLFLGR 806
Query: 121 KPVLADD-----------SMKGKIRHQDGMFGKIPQGLME---DQISEIMNWVELDADME 166
K A + + G P G ++ D++ E+M E D ++E
Sbjct: 807 KIAAASKLPPNSTEEAAEIARAADESATSIIGTCPLGALDMTVDRLRELMK--ERD-ELE 863
Query: 167 GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAE---QEKFNLLT 223
G+++ +NAYK Y K+R AS ES+ + + L A HPL G + QE +
Sbjct: 864 GMERAASNAYKLYQKTRGAASSESMSRAQPLIHAG--PHPLLCASGGVDATTQELAQITA 921
Query: 224 KMSEYRPPSTVLEFGKARFIIIN 246
+ YRP +TVLE A +N
Sbjct: 922 SIRAYRPQATVLEAEVASATKVN 944
>gi|212539832|ref|XP_002150071.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces marneffei
ATCC 18224]
gi|210067370|gb|EEA21462.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces marneffei
ATCC 18224]
Length = 948
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 4/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L AG + +Y Y LD TAR I +F+ G +LVVTDVAAR
Sbjct: 384 TIIFAATKHHVDYIASMLREAGFAVSYAYGSLDQTARNIQVQRFRAGATHILVVTDVAAR 443
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGRK
Sbjct: 444 GIDIPILANVINYDFPSQPKVFVHRVGRTARAGQKGWSYSLVRDADAPYLLDLQLFLGRK 503
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + ++ + G P+ + + ++ ++D++ + N K Y++
Sbjct: 504 LVLGRPETEPNF-AEEVVIGGFPRDTLSGHCEWVTKTLDNNSDLQAQRGVANRGEKLYMR 562
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS+ES K+ KE+ + VH LF + E E+ +L ++ YRP T+ E
Sbjct: 563 TRNAASLESAKRAKEVVTSDKWTTVHALFTEENNQMEVEREKMLARLGGYRPQETIFE 620
>gi|339238717|ref|XP_003380913.1| putative ATP-dependent RNA helicase DDX54 [Trichinella spiralis]
gi|316976124|gb|EFV59463.1| putative ATP-dependent RNA helicase DDX54 [Trichinella spiralis]
Length = 548
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 137/237 (57%), Gaps = 11/237 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F ATK++VE++H +L +YS +D AR++N KF +I +L+VTD+AA
Sbjct: 81 LTLIFCATKHYVEFLHAVLEYFNFKCACLYSSMDSEARRVNVEKFHRKQINILIVTDLAA 140
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD VIN++FP KAKLFVHRVGR ARAGR G A S +S+DE Y LDL LFLGR
Sbjct: 141 RGVDIPLLDNVINFHFPAKAKLFVHRVGRAARAGRHGHAISFISTDEYAYLLDLYLFLGR 200
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
S G + G +PQ ++D+ I L K N+YK Y
Sbjct: 201 SLQF---STSGTCADVGDLIGTVPQRRVDDENRTI---ALLLNTTNLDLKVAENSYKHYT 254
Query: 181 KSRPGASVESVKKVK-ELELATMQVHPLFRNIG----SAEQEKFNLLTKMSEYRPPS 232
+SRP +S ESV++ K E L + HP +G E+EK LL + +RP +
Sbjct: 255 RSRPTSSAESVRRAKAETRLNNLPNHPAMAAVGFGCEKLEREKDILLANIKCFRPQT 311
>gi|451999037|gb|EMD91500.1| hypothetical protein COCHEDRAFT_1136109 [Cochliobolus
heterostrophus C5]
Length = 891
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+ VEY+ +L G + +Y+Y +LD TARK F+TG R+L+VTDVAAR
Sbjct: 356 TIIFAATKHRVEYLANLLRNLGYAISYVYGNLDQTARKEQIQDFRTGLTRILIVTDVAAR 415
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P ++ VINY+FP + K+FVHRVGR ARAGR G AYSL +L Y +DL LFLG++
Sbjct: 416 GVDMPHINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRHVDLPYLIDLQLFLGKR 475
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L S + D + G + +E + ++ + D D+ + ++Y +
Sbjct: 476 LLLGRSSDEPNY-ADDFVVGSLSPWQVESSVEQVNRQLSEDEDLALLLSVAEKGERQYQR 534
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIG-SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SV + KEL + + H LF N +A++EK ++L ++ +RP TV E G
Sbjct: 535 TRNQASAQSVVRAKELAASPNFAETHMLFSNDAHTAQREKEDMLARIQSFRPAETVFEIG 594
Query: 239 K 239
K
Sbjct: 595 K 595
>gi|118777945|ref|XP_308366.3| AGAP007511-PA [Anopheles gambiae str. PEST]
gi|116132145|gb|EAA04660.3| AGAP007511-PA [Anopheles gambiae str. PEST]
Length = 816
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 132/203 (65%), Gaps = 11/203 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F T++HVE + +L AG+ ++++YS LD +ARKIN AKF K+ VLVVTD+AAR
Sbjct: 285 TVIFAGTQHHVELISLMLTKAGVPNSHVYSGLDASARKINTAKFTHRKVNVLVVTDIAAR 344
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP+LD VIN +FP K KLF+HRVGRCARAGRSG+AY++ S+D++ + +DL +FL R
Sbjct: 345 GLDIPTLDFVINLHFPGKPKLFIHRVGRCARAGRSGMAYTIFSNDDVAHLIDLHMFLNRP 404
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+AD G +P + E + + +V D+ + NNAYK+Y+
Sbjct: 405 LDVADRK----------TMGIVPPDMQETEHLLVQEYVR-HVDLATAYRVSNNAYKQYIV 453
Query: 182 SRPGASVESVKKVKELELATMQV 204
+RP AS S K+ K+ ++ + V
Sbjct: 454 TRPAASAASNKRAKQFKIDELGV 476
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 146/249 (58%), Gaps = 15/249 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV ++L AG S + IY LD AR F+ GK +LVVTDVA+R
Sbjct: 349 TLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASR 408
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR+G AYSLV +++ Y LDL LFL R
Sbjct: 409 GIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLNRP 468
Query: 122 PVLADDSMKGKIR---HQDGMFGKIPQGLMEDQISEIMNWVE----LDADMEGIQKTCNN 174
V + +K + + G +PQ L ++E++ WV+ D +++ +
Sbjct: 469 LVTSSKQVKTDSDCDFTKQIVLGSLPQEL----VAELLEWVQRIVSRDVELQQLSNVAAR 524
Query: 175 AYKKYVKSRPGASVESVKKVKEL--ELATMQVHPLFRNIG--SAEQEKFNLLTKMSEYRP 230
K Y ++R S ES K+ KEL +PLF ++ AE++ LL+K+S YRP
Sbjct: 525 GEKLYFRTRATCSAESAKRAKELVDSKGWSSNNPLFGDVSVIEAEEKYAELLSKVSSYRP 584
Query: 231 PSTVLEFGK 239
TV E G+
Sbjct: 585 SETVFEIGQ 593
>gi|451848327|gb|EMD61633.1| hypothetical protein COCSADRAFT_148565 [Cochliobolus sativus
ND90Pr]
Length = 891
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+ VEY+ +L G + +Y+Y +LD TARK F+TG R+L+VTDVAAR
Sbjct: 356 TIIFAATKHRVEYLANLLRNLGYAISYVYGNLDQTARKEQIQDFRTGLTRILIVTDVAAR 415
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P ++ VINY+FP + K+FVHRVGR ARAGR G AYSL +L Y +DL LFLG++
Sbjct: 416 GVDMPHINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRHVDLPYLIDLQLFLGKR 475
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L S + D + G + +E + ++ + D D+ + ++Y +
Sbjct: 476 LLLGRSSDEPNY-ADDFVVGSLSPWQVESSVEQVNRQLSEDEDLALLLSVAEKGERQYQR 534
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIG-SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SV + KEL + + H LF N +A++EK ++L ++ +RP TV E G
Sbjct: 535 TRNQASAQSVVRAKELAASPNFAETHMLFSNDAHTAQREKEDMLARIQSFRPAETVFEIG 594
Query: 239 K 239
K
Sbjct: 595 K 595
>gi|189189808|ref|XP_001931243.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972849|gb|EDU40348.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 892
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+ VEY+ +L AG + +Y+Y +LD TARK F+TG R+LVVTDVAAR
Sbjct: 358 TIIFAATKHRVEYLSNLLRNAGYAVSYVYGNLDQTARKEQIQDFRTGLTRILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P ++ VINY+FP + K+FVHRVGR ARAGR G AYSL +L Y +DL LFLG++
Sbjct: 418 GVDMPHINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRHVDLPYLIDLQLFLGKR 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L S + +D + G + +E + + + D D+ + ++Y +
Sbjct: 478 -LLVGRSSEEPNYAEDFVVGSLAPWQLESSVELVNKQLAEDEDLALLLSVAEKGERQYQR 536
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIG-SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SV + KEL + + H LF + A++EK N+L ++ +RP TV E G
Sbjct: 537 TRNQASAQSVGRAKELVASPNFAETHMLFSDDAHQAQREKENMLARIQSFRPAETVFEIG 596
Query: 239 K 239
+
Sbjct: 597 R 597
>gi|242803555|ref|XP_002484198.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces
stipitatus ATCC 10500]
gi|218717543|gb|EED16964.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces
stipitatus ATCC 10500]
Length = 945
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ IL AG + +Y Y LD TAR I +F+ G +LVVTDVAAR
Sbjct: 382 TIIFAATKHHVDYIVSILREAGFAVSYAYGSLDQTARNIQVQRFRNGATHILVVTDVAAR 441
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGRK
Sbjct: 442 GIDIPILANVINYDFPSQPKVFVHRVGRTARAGQKGWSYSLVRDADAPYLLDLQLFLGRK 501
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
VL + ++ + G IP+ + I ++ D++ + N K Y++
Sbjct: 502 LVLGRPETEVNF-AEEVVVGGIPRDTLSSHCEWITKTLDNSPDIQAQRGVANRGEKLYMR 560
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTVLE 236
+R AS+ES K+ KE+ + +H LF + E E+ +L ++ YRP T+ E
Sbjct: 561 TRNAASLESAKRAKEVVTSDKWTSLHALFNGEDNQMEVEREKMLARLGGYRPQETIFE 618
>gi|330947853|ref|XP_003306985.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
gi|311315219|gb|EFQ84923.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
Length = 893
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+ VEY+ +L AG + +Y+Y +LD TARK F+TG R+LVVTDVAAR
Sbjct: 358 TIIFAATKHRVEYLSNLLRNAGYAVSYVYGNLDQTARKEQIQDFRTGLTRILVVTDVAAR 417
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P ++ VINY+FP + K+FVHRVGR ARAGR G AYSL +L Y +DL LFLG++
Sbjct: 418 GVDMPHINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRHVDLPYLIDLQLFLGKR 477
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L S + +D + G + +E + + + D D+ + ++Y +
Sbjct: 478 -LLVGRSSEEPNYAEDFVVGSLAPWQLESSVELVNKQLAEDEDLALLLSVAEKGERQYQR 536
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFRNIG-SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SV + KEL + + H LF + A++EK N+L ++ +RP TV E G
Sbjct: 537 TRNQASAQSVGRAKELVASPNFAETHMLFSDDAHKAQREKENMLARIQSFRPAETVFEIG 596
Query: 239 K 239
+
Sbjct: 597 R 597
>gi|357147783|ref|XP_003574483.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 29-like
[Brachypodium distachyon]
Length = 851
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 152/253 (60%), Gaps = 24/253 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAAR
Sbjct: 301 TMIFVSTKYHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRAKKTMLLIVTDVAAR 360
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD V+N++FP K KLFVHRVGR AR GR+G AYS V+S+++ + LDL LFL K
Sbjct: 361 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRTGTAYSFVTSEDMPFLLDLHLFLS-K 419
Query: 122 PVLADDSMKGKIRHQDGM--------------FGKIPQGLME---DQISEIMNWVELDAD 164
P+ + + ++ DGM +G+ PQ +++ D + E++N D
Sbjct: 420 PLRPAPTEEELLKDMDGMNLKIDQSLANGETVYGRFPQTIIDLCSDGVKEVINGC---TD 476
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLT 223
+ ++K C NA++ Y+K+R S ES+++ K+ + HP+FR++ S E
Sbjct: 477 LIALEKPCANAFRLYLKTRAMPSKESIRRAKDFPREGL--HPIFRDVLRSDEISALAFSE 534
Query: 224 KMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 535 RLKSFRPKQTILE 547
>gi|115397285|ref|XP_001214234.1| hypothetical protein ATEG_05056 [Aspergillus terreus NIH2624]
gi|121738336|sp|Q0CMM8.1|DBP10_ASPTN RecName: Full=ATP-dependent RNA helicase dbp10
gi|114192425|gb|EAU34125.1| hypothetical protein ATEG_05056 [Aspergillus terreus NIH2624]
Length = 928
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 145/247 (58%), Gaps = 11/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 377 TIVFAATKHHVDYLYSLLREAGFAVSYAYGSLDQTARKIQVNNFRTGLSNILVVTDVAAR 436
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + Y LDL LFLGR+
Sbjct: 437 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRR 496
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV----ELDADMEGIQKTCNNAYK 177
VL + +D + G P+ D +++ WV + + D+ + K
Sbjct: 497 LVLGREHGDQVDYAEDVVVGGFPR----DSLAQNCEWVTRVLDDNRDIFSQRTVATKGEK 552
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
Y+++R AS+ES K+ K + + +HPLF + + E ++ +L ++ YRP T+
Sbjct: 553 LYMRTRNAASLESAKRSKSVVGSDHWTTIHPLFSDAETEMEIQREKMLARIGGYRPQETI 612
Query: 235 LEFGKAR 241
E R
Sbjct: 613 FEVNNRR 619
>gi|406604990|emb|CCH43589.1| hypothetical protein BN7_3142 [Wickerhamomyces ciferrii]
Length = 958
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 146/256 (57%), Gaps = 21/256 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEYV +L G + +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 414 TIIFVPTRHHVEYVTTLLKDTGYAVSYIYGTLDQHARKRQLLNFRAGLSPILVVTDVAAR 473
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+ P +K+FVHRVGR ARAG G AYS+VS +EL Y LDL LFLG+K
Sbjct: 474 GIDIPVLANVINYSLPGSSKIFVHRVGRTARAGNKGWAYSIVSENELPYLLDLELFLGKK 533
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L D ++ KI + + M G+ P+ +E N + D D+
Sbjct: 534 ILLTPMHEKKCEILKEQQGDSYVEPKISYTERMVLGQAPRINVESMTELFNNILSNDYDL 593
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF--RNIGSAEQEKFNLLT 223
+ +Q A K Y K+R AS+ESVK+ KE++ + L +N+ E+EK + L
Sbjct: 594 KVLQGVSTKAEKLYFKTRTAASIESVKRAKEVKHSGWDEQNLLFGKNL---EKEKIDFLA 650
Query: 224 KMSEYRPPSTVLEFGK 239
K+ R TV EFGK
Sbjct: 651 KLQNRRHKETVFEFGK 666
>gi|361129714|gb|EHL01602.1| putative ATP-dependent RNA helicase dbp10 [Glarea lozoyensis 74030]
Length = 596
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 11/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+HV+Y+ +L L+G + ++ Y LD TAR I +F+TG +LVVTDVAAR
Sbjct: 37 TIIFAATKHHVDYLASLLRLSGFAVSHAYGSLDQTARNIQVEEFRTGMTNILVVTDVAAR 96
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 97 GIDIPVLANVINYDFPPQPKIFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQLFLGRR 156
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
+L DS + +D + G ++ D++ W+ D D+ G++ K
Sbjct: 157 LLLGKDSGENANYAEDVIVG----AMVRDKLEATSEWITKLLGDDDDLNGLRNVAAKGEK 212
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTV 234
Y+K+R AS ES + KE+ MQ+HPLF + +AEQ + +L ++S +RP TV
Sbjct: 213 LYIKTRNSASNESANRAKEVVASKGWMQLHPLFNSETDNAEQARIEMLARISGFRPHETV 272
Query: 235 LEFG 238
E G
Sbjct: 273 FEIG 276
>gi|303277179|ref|XP_003057883.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460540|gb|EEH57834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 532
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 17/210 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVFTAT++HVE + +L G+ + +Y +D ARKIN KF+ K VLVVTDVAAR
Sbjct: 326 TVVFTATRHHVELLMAVLEEEGVKCSAVYGSMDMAARKINIGKFRARKSEVLVVTDVAAR 385
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD V+N++FP + KLFVHRVGR ARAGRSGVA+S+++ +E+ + +DL LFLGR
Sbjct: 386 GIDIPLLDNVVNFDFPPRPKLFVHRVGRVARAGRSGVAHSILTKEEMGFLVDLHLFLGRS 445
Query: 122 PVLA-----DDSMKGKI------RHQDGMFGKIPQ---GLMEDQISEIMNWVELDADMEG 167
V A D+ + + R Q + G P L++D++ +I +M+G
Sbjct: 446 LVAASTTPPDNREEARALCEDADREQRSVVGGAPPTSLDLVQDRVRDIFQS---KVEMDG 502
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
++K C+NAYK Y ++R A ESV + EL
Sbjct: 503 MRKACDNAYKLYQRTRGSAGNESVARGAEL 532
>gi|242081437|ref|XP_002445487.1| hypothetical protein SORBIDRAFT_07g020310 [Sorghum bicolor]
gi|241941837|gb|EES14982.1| hypothetical protein SORBIDRAFT_07g020310 [Sorghum bicolor]
Length = 666
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 155/252 (61%), Gaps = 22/252 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK+HVE+++ + G+ + Y +D AR I+ +KF+ K +L+VTDVAAR
Sbjct: 307 TIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARMIHISKFRARKTMLLIVTDVAAR 366
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
G+DIP LD V+N++FP K KLFVHRVGR AR GR G AY+ V+S+++ Y LDL LFL R
Sbjct: 367 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRIGTAYTFVTSEDMPYLLDLHLFLSRP 426
Query: 121 -------KPVLAD-DSMKGKIRHQ----DGMFGKIPQGLME---DQISEIMNWVELDADM 165
+ +L D D++ KI + ++G+ PQ +++ D + E+++ ++
Sbjct: 427 LRPAPTEEEILKDMDTINMKIDEAIANGESVYGRFPQTVLDLASDGLKEVISGC---TEL 483
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI-GSAEQEKFNLLTK 224
++K C NA++ Y+K+R S ES+K+VK+L + HP+FR++ S E +
Sbjct: 484 IALEKPCANAFRLYLKTRAMPSKESIKRVKDLPREGL--HPIFRDVLRSDELSALAFSER 541
Query: 225 MSEYRPPSTVLE 236
+ +RP T+LE
Sbjct: 542 LKSFRPKQTILE 553
>gi|145348205|ref|XP_001418546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578775|gb|ABO96839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 546
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 139/221 (62%), Gaps = 19/221 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF +T++HVE++ +L G+ + IY +D ARK+ +F+ K VLVVTDVAAR
Sbjct: 331 TVVFASTRHHVEWLQNVLEFEGVKVSSIYGSMDMMARKMALGRFRAKKADVLVVTDVAAR 390
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINY+FP K KLFVHRVGR ARAGR+G A+S + +EL + +DL LFLGRK
Sbjct: 391 GIDIPLLDNVINYDFPAKGKLFVHRVGRVARAGRTGNAHSFLVKEELGFLVDLHLFLGRK 450
Query: 122 --------PVLADDSMKGKIRHQD---GMFGKIPQG---LMEDQISEIMNWVELDADMEG 167
P +++++ + ++ + G P G ++ D++ E+M + + EG
Sbjct: 451 IAAASKAPPSSTEEALEIARKAEESATSIIGTCPIGALDMLTDRLREVMKAKD---EFEG 507
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF 208
+++T NNAY+ Y K+R AS ES+ + + L LA HPL
Sbjct: 508 LERTANNAYRLYQKTRGTASSESMSRAQPLVLAG--PHPLL 546
>gi|326514620|dbj|BAJ96297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 873
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 155/255 (60%), Gaps = 28/255 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE+++ + G+ ++ Y +D AR I+ ++F+ K +L+VTDVAAR
Sbjct: 312 TMIFVSTKYHVEFLNILFREEGLEASLSYGAMDQEARTIHISRFRARKTMLLIVTDVAAR 371
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
G+DIP LD V+N++FP K KLFVHRVGR AR GR+G A++ V+S+++ + LDL LFL +
Sbjct: 372 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRTGTAFTFVTSEDMPFLLDLHLFLSKP 431
Query: 121 -KPVLADDSMKGKIRHQDGM--------------FGKIPQGLME---DQISEIMNWVELD 162
+P +D + ++ DGM +G+ PQ +++ D + E+++
Sbjct: 432 LRPAPTEDEL---LKDMDGMNLKIDQSLADGETIYGRFPQTILDLCSDGVKEVISGC--- 485
Query: 163 ADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNL 221
D+ ++K C NA++ Y+K+R S ESV++ K+L + HP+FR++ ++
Sbjct: 486 TDLIALEKPCANAFRLYLKTRAMPSKESVRRAKDLPREGL--HPIFRDVLRPDEISAIAF 543
Query: 222 LTKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 544 SDRLKSFRPKQTILE 558
>gi|326504194|dbj|BAJ90929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 873
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 155/255 (60%), Gaps = 28/255 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE+++ + G+ ++ Y +D AR I+ ++F+ K +L+VTDVAAR
Sbjct: 312 TMIFVSTKYHVEFLNILFREEGLEASLSYGAMDQEARTIHISRFRARKTMLLIVTDVAAR 371
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
G+DIP LD V+N++FP K KLFVHRVGR AR GR+G A++ V+S+++ + LDL LFL +
Sbjct: 372 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRTGTAFTFVTSEDMPFLLDLHLFLSKP 431
Query: 121 -KPVLADDSMKGKIRHQDGM--------------FGKIPQGLME---DQISEIMNWVELD 162
+P +D + ++ DGM +G+ PQ +++ D + E+++
Sbjct: 432 LRPAPTEDEL---LKDMDGMNLKIDQSLADGETIYGRFPQTILDLCSDGVKEVISGC--- 485
Query: 163 ADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNL 221
D+ ++K C NA++ Y+K+R S ESV++ K+L + HP+FR++ ++
Sbjct: 486 TDLIALEKPCANAFRLYLKTRAMPSKESVRRAKDLPREGL--HPIFRDVLRPDEISAIAF 543
Query: 222 LTKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 544 SDRLKSFRPKQTILE 558
>gi|294900795|ref|XP_002777119.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239884576|gb|EER08935.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 967
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 154/256 (60%), Gaps = 29/256 (11%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT+++VE+ +L GIS+ IY +D T R + +KF++GK VL+VTDVAAR
Sbjct: 304 TIVFVATRHNVEFFASLLTQVGISNAPIYGSMDQTQRTSSLSKFRSGKASVLLVTDVAAR 363
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINY+FP +KLFVHR GR ARAG G+ SLV+ D++ Y ++L+LFLGRK
Sbjct: 364 GIDIPQLDYVINYDFPSSSKLFVHRCGRTARAGAKGLCASLVTHDDMPYAVELMLFLGRK 423
Query: 122 ----------PVLAD-DSMKGKIRHQD-GMFGKIPQGLMEDQISEIMNWVELDADMEGIQ 169
P+ A+ D G++ + + G IP +++++ + V DA++ +Q
Sbjct: 424 LGLQALGSDHPIPAEGDGDDGEVDEKRLCVIGGIPS--VQEEVETVRRLVSGDAELASLQ 481
Query: 170 KTCNNAYKKYVKSRPGASVESVKKVK---ELELATMQ-----VHPLFR---NIGSAE--- 215
++ +AY Y K+RP AS +SV++ K E Q HP FR ++GS
Sbjct: 482 RSMMSAYHLYYKTRPAASNQSVRRAKLILRAEAGGPQRLLDTPHPAFRTAADLGSQSVED 541
Query: 216 -QEKFNLLTKMSEYRP 230
+EK +++ ++ +RP
Sbjct: 542 MKEKLDMIAQLRSFRP 557
>gi|326526589|dbj|BAJ97311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 880
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 155/255 (60%), Gaps = 28/255 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE+++ + G+ ++ Y +D AR I+ ++F+ K +L+VTDVAAR
Sbjct: 319 TMIFVSTKYHVEFLNILFREEGLEASLSYGAMDQEARTIHISRFRARKTMLLIVTDVAAR 378
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
G+DIP LD V+N++FP K KLFVHRVGR AR GR+G A++ V+S+++ + LDL LFL +
Sbjct: 379 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRTGTAFTFVTSEDMPFLLDLHLFLSKP 438
Query: 121 -KPVLADDSMKGKIRHQDGM--------------FGKIPQGLME---DQISEIMNWVELD 162
+P +D + ++ DGM +G+ PQ +++ D + E+++
Sbjct: 439 LRPAPTEDEL---LKDMDGMNLKIDQSLADGETIYGRFPQTILDLCSDGVKEVISGC--- 492
Query: 163 ADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNL 221
D+ ++K C NA++ Y+K+R S ESV++ K+L + HP+FR++ ++
Sbjct: 493 TDLIALEKPCANAFRLYLKTRAMPSKESVRRAKDLPREGL--HPIFRDVLRPDEISAIAF 550
Query: 222 LTKMSEYRPPSTVLE 236
++ +RP T+LE
Sbjct: 551 SDRLKSFRPKQTILE 565
>gi|396463068|ref|XP_003836145.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
gi|312212697|emb|CBX92780.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
Length = 894
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F ATK+ VEY+ +L G + +Y+Y +LD TARK F+TG R+LVVTDVAAR
Sbjct: 359 TIIFAATKHRVEYLANLLRATGYAVSYVYGNLDQTARKEQIQDFRTGLTRILVVTDVAAR 418
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P ++ VINY+FP + K+FVHRVGR ARAGR G AYSL +L Y +DL LFLG++
Sbjct: 419 GVDMPHINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRHVDLPYLIDLQLFLGKR 478
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V+ S+ +D + G + +E + + + D D+ + ++Y +
Sbjct: 479 LVIG-RSIAEPNYAEDFVVGTLAPYQLESSVEIVNKQLTDDEDLALLLSVAEKGERQYQR 537
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS +SV++ KEL + + H LF ++ +A +EK +L ++ +RP TV E G
Sbjct: 538 TRNQASAQSVQRAKELVASPNFAETHMLFSDDMHNALREKDKMLERIQSFRPAETVFEIG 597
Query: 239 K 239
K
Sbjct: 598 K 598
>gi|384495385|gb|EIE85876.1| hypothetical protein RO3G_10586 [Rhizopus delemar RA 99-880]
Length = 958
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 153/244 (62%), Gaps = 8/244 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L +AG +Y+Y LD AR I +F+ G +LVVTDVAA
Sbjct: 428 QTILFAATKHHVEYLAGLLTIAGYQVSYVYGSLDQAARSIQINRFRQGVTNILVVTDVAA 487
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+F +K+FVHRVGR ARAGR G AYSLV+SDEL Y +DL LFL R
Sbjct: 488 RGIDIPVLENVINYDFCGSSKVFVHRVGRAARAGRRGWAYSLVTSDELPYLVDLELFLTR 547
Query: 121 KPVLADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
VL D K + + + G +P + D + + N VE DA +EG +T NAYK Y
Sbjct: 548 PLVLGGD--KDEYDYTSELVVGTLPVDALIDDQTWVTNQVERDAALEGTYRTAMNAYKLY 605
Query: 180 VKSRPGASVESVKKVKEL--ELATMQVHPLFRN---IGSAEQEKFNLLTKMSEYRPPSTV 234
+++ A+ ES + KE+ + Q+HPL ++ +A+ E+ N++ +S +RP T+
Sbjct: 606 NRTKSRAAPESYSRAKEVIKKKNYSQLHPLLKHTVGTSAADIERANMIQAISGFRPAETI 665
Query: 235 LEFG 238
E G
Sbjct: 666 FEVG 669
>gi|320593114|gb|EFX05523.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 956
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 146/247 (59%), Gaps = 12/247 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEYV +L AG + +Y+Y LD TARK++ F+ G+ +LVVTD+AAR
Sbjct: 392 TIVFAATKHHVEYVAAVLREAGFAVSYVYGSLDQTARKMHVDDFRRGRTNILVVTDLAAR 451
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +AK+FVHRVGR ARAG+ G +YSLV + Y +DL LFLGR+
Sbjct: 452 GIDIPVLANVINYDFPPQAKVFVHRVGRTARAGQRGWSYSLVQDTDAPYLVDLQLFLGRR 511
Query: 122 PVLADDSMKGKIR---HQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
V+ + G QD + G + + +E + + + D+E ++ A ++
Sbjct: 512 LVVGREVAAGAAAPDMGQDVVVGSLARSAVEPHVEWVNTLLSDVTDVEVLRTVTVKAQRQ 571
Query: 179 YVKSRPGASVESVKKVKELELAT--MQVHPLFRNI-------GSAEQEKFNLLTKMSEYR 229
Y ++R AS +S ++ +E+ Q+H LF G+ + + +L K++ Y+
Sbjct: 572 YYRTRLSASSQSARRAREMVAGPGWGQLHVLFAADDADTAASGTTGETRAEMLAKITGYK 631
Query: 230 PPSTVLE 236
P ++ E
Sbjct: 632 PVESIFE 638
>gi|402224187|gb|EJU04250.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 926
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 150/249 (60%), Gaps = 19/249 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HV+Y+ +L AG S ++IY LD AR + ++F+ G+ +LVVTDVAA
Sbjct: 392 QTLIFAATKHHVDYLANLLTAAGYSVSHIYGSLDQAARTLEMSRFRRGQTNLLVVTDVAA 451
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+FP +++FVHRVGR ARAGR G A+SL++S +L Y LDL LFLGR
Sbjct: 452 RGIDIPVLENVINYDFPAGSRVFVHRVGRTARAGRKGWAWSLIASTDLPYLLDLQLFLGR 511
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDAD----MEGIQKTCNNAY 176
P+ +G ++G +P+ +++D EI N L+AD + G+++ +
Sbjct: 512 -PLKGTAVGEGTY-TTSLIYGTVPRDVLDD---EIENIRRLEADRHVHLPGLREVMRRGH 566
Query: 177 KKYVKSRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAEQE-----KFNLLTKMSEYR 229
Y +++ A+ S ++ K+L ++HP+F G EQ K LL + ++
Sbjct: 567 GMYERTKAKANHSSYERAKQLVKSEGEGRIHPIF---GRPEQHEASTSKAALLMAIDSFK 623
Query: 230 PPSTVLEFG 238
P TV E G
Sbjct: 624 PQETVFEIG 632
>gi|312084924|ref|XP_003144474.1| DEAD/DEAH box helicase [Loa loa]
gi|307760364|gb|EFO19598.1| DEAD/DEAH box helicase [Loa loa]
Length = 783
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 6/239 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
TVVF AT HVEY+ + AGI +YS LD AR IN KF+ + +L+VTD+AA
Sbjct: 274 QTVVFCATMKHVEYLAAVAEKAGIDCVVLYSQLDCVARNINIQKFRKKECSLLIVTDIAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP LD INY+FP K KLFVHRVGR ARAGR G A SL +DE+ Y +DL LFL R
Sbjct: 334 RGVDIPLLDVAINYHFPPKPKLFVHRVGRVARAGRFGKAISLFGADEVPYVVDLFLFLSR 393
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
A K + + G P +++ ++ + N + +++ + K NA +KY
Sbjct: 394 PLKFATTDSANK---DETLIGIFPDDIIDREVDFLKNVHDNSDELDDLLKKSENAMQKYK 450
Query: 181 KSRPGASVESVKKVKELELATM---QVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
K+RP S ESV++ K AT+ VHP + E + +LL + ++ +T+ E
Sbjct: 451 KTRPQPSAESVRRAKGEIKATLFKAAVHPFLQQESPEEIVRQSLLRHLHNFKSTTTIFE 509
>gi|213402583|ref|XP_002172064.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
gi|212000111|gb|EEB05771.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
Length = 854
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 13/245 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEY+ ++L AG + IY LD TARK F+ G VLVVTDVAAR
Sbjct: 346 TIVFVPTKHHVEYITEMLKQAGYGVSRIYGSLDQTARKNEITNFRLGVSNVLVVTDVAAR 405
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY+FP + K+FVHRVGR ARAGR+G AY+ V +++ Y LDL LFL R
Sbjct: 406 GIDIPLLSNVVNYDFPAQPKIFVHRVGRTARAGRTGWAYTFVRAEDAGYLLDLKLFLNRD 465
Query: 122 PVLAD--DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE--LDADMEGIQ--KTCNNA 175
V A+ S + ++ + G +P + +S + W E + ++E Q K
Sbjct: 466 LVTAEVAASREECDFTKELVLGSLPS----EYVSNMQEWYESLISKNVELAQLCKVAAKG 521
Query: 176 YKKYVKSRPGASVESVKKVKELELAT--MQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPS 232
K Y+++R +S ES K+ KEL ++ ++PL ++ + A++ + LL K+S +RP
Sbjct: 522 EKLYIRTRTASSAESAKRAKELVGSSGWSSINPLLKDKVDDADEARALLLAKVSSFRPSE 581
Query: 233 TVLEF 237
TV E
Sbjct: 582 TVFEL 586
>gi|255072735|ref|XP_002500042.1| predicted protein [Micromonas sp. RCC299]
gi|226515304|gb|ACO61300.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 523
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 17/210 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVFTAT++HVE + +L GI+ + +Y +D ARK++ KF+ K V+VVTDVAAR
Sbjct: 317 TVVFTATRHHVELLVTVLESEGITVSAVYGSMDMAARKLHIGKFRNRKTSVMVVTDVAAR 376
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP LD V+N++FP + KLFVHRVGR ARAGR+GVA+SL+ +E+ + +DL LFLGR
Sbjct: 377 GIDIPLLDNVVNFDFPPRPKLFVHRVGRVARAGRTGVAHSLLVKEEMGFLVDLHLFLGRS 436
Query: 121 ------KPVLADDSMKGKIRHQD----GMFGKIPQ---GLMEDQISEIMNWVELDADMEG 167
KP + D + D + G IP L++D++ E+ + +++G
Sbjct: 437 LVAAPVKPPESRDEARQIADEADEAQRSVVGIIPPTSLDLVQDRVRELFDA---RTELDG 493
Query: 168 IQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
+++ C+NAYK Y ++R A+ ESV + EL
Sbjct: 494 LRRACDNAYKLYQRTRGSAANESVARGAEL 523
>gi|402082831|gb|EJT77849.1| ATP-dependent RNA helicase DBP10 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 951
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEYV +L AG + ++ Y LD TARKI +F+ GK +LVVTD+AAR
Sbjct: 369 TIIFTATKHHVEYVSALLNHAGFAVSHAYGSLDQTARKIQVDEFRRGKTNILVVTDLAAR 428
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+F + K+FVHRVGR ARAG+ G +Y+L+ + Y LDL LFLGR+
Sbjct: 429 GIDIPILANVINYDFCDQPKVFVHRVGRTARAGQRGWSYNLICDVDAPYLLDLQLFLGRR 488
Query: 122 PVLADDSMKGKIRH--QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
++ + +G D + G + + +E + + + D + ++ A+K++
Sbjct: 489 LIVGQEIPEGDPPSFASDVVLGALQRWPIETNVEWVNKTLVESYDTQVLRTVAAKAHKQF 548
Query: 180 VKSRPGASVESVKKVKELELAT--MQVHPLFRNIGSAEQE----KFNLLTKMSEYRPPST 233
V+++ AS+ S K+ +EL + Q + LF G AE + + +L K+S ++P T
Sbjct: 549 VRTKIAASISSAKRARELTASKGWTQTNVLF-GTGPAEDDAEGLRAEMLAKISGFKPQET 607
Query: 234 VLEFGKA 240
V E G+
Sbjct: 608 VFEIGRG 614
>gi|440637343|gb|ELR07262.1| ATP-dependent RNA helicase dbp10 [Geomyces destructans 20631-21]
Length = 928
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 145/240 (60%), Gaps = 3/240 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y+ +L L+G + ++ Y LD TARK+ F+TG +LVVTDVAAR
Sbjct: 367 TIVFAATKHHVDYLASLLRLSGFAVSHAYGSLDQTARKMQVEDFRTGMTNILVVTDVAAR 426
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY+FP + K+FVHRVGR ARAG+ G +YSLV + Y LDL LFLGR+
Sbjct: 427 GIDIPVLANVVNYDFPPQPKIFVHRVGRTARAGQRGWSYSLVKETDAPYLLDLQLFLGRR 486
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+L +S +D + G + + +E I + D D+ ++ + Y+K
Sbjct: 487 LLLGRESGDSPNYAEDVIVGSVVRDKLETNQEWINKLLRDDDDLAALRGVSVKGERLYLK 546
Query: 182 SRPGASVESVKKVKE--LELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+R AS ES K+ K+ +Q+HPLF S EQ + ++L +++ +RP TV E G
Sbjct: 547 TRNSASSESAKRAKQSVASAQWIQLHPLFNTETNSNEQARIDMLARIAGFRPTETVFEVG 606
>gi|390602288|gb|EIN11681.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 970
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 145/260 (55%), Gaps = 21/260 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG + ++IY LD TAR I +F+ G+ +LVVTDVAA
Sbjct: 407 QTLVFVATKHHVEYLTTLLATAGYAVSHIYGSLDQTARTIQMDQFRRGQTSILVVTDVAA 466
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+FP A++FVHRVGR ARAGR G A+S V++ EL Y LDL LFLGR
Sbjct: 467 RGIDIPVLENVINYDFPQGARVFVHRVGRTARAGRPGWAWSFVTNTELPYLLDLQLFLGR 526
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
K + D + + ++ + G + ++ ++ I E++ + +++
Sbjct: 527 PLKSEVDDAGVGDSVYAENLVLGTFHRDKIDQEVESIRGLDEINHSLYTLREVMRKGQSM 586
Query: 179 YVKSRPGASVESVKKVKELE-----------LATMQVHP-LFRNIGSAEQE-------KF 219
Y +S+ AS S K+ K + A VHP L R A+ E K
Sbjct: 587 YERSKGKASPASYKRAKAMTKDIPGKWGLAGSAEAGVHPVLLRGRSEAQMEARHTEDAKK 646
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
LL ++ +RP TV E GK
Sbjct: 647 ALLKAVNSFRPAETVFEIGK 666
>gi|393217844|gb|EJD03333.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 964
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 149/259 (57%), Gaps = 22/259 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEYV+ +L AG ++IY LD AR + +F+ G+ VLVVTDVAA
Sbjct: 401 QTLIFVATKHHVEYVNALLTTAGYRVSHIYGQLDQAARTLQMERFRRGETSVLVVTDVAA 460
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L V+N++FP A++FVHRVGR ARAGR+G A+S V++ EL + LDL LFLGR
Sbjct: 461 RGIDIPVLSHVVNFDFPAGARVFVHRVGRTARAGRTGWAWSFVTATELPHLLDLQLFLGR 520
Query: 121 KPVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
P+ + D S+ + + + G P+ ++D+ I + ++ + +++ +
Sbjct: 521 -PLRSTVDTSIVERAYIESLILGAFPRTKIDDETEYIRSLDSGNSSLTTLREVMRRGHGM 579
Query: 179 YVKSRPGASVESVKKVKEL----------ELATMQVHPLFR------NIGSAEQE---KF 219
Y +S+ AS S K+ KE+ + +HP+FR +I E+E +
Sbjct: 580 YERSQAKASQASYKRAKEMMRSGTWGFATTVGETNIHPVFRLMQGTGDIQDGEKEEEARR 639
Query: 220 NLLTKMSEYRPPSTVLEFG 238
LL ++ + P TV E G
Sbjct: 640 ALLKAVNSFSPAETVFEIG 658
>gi|296212991|ref|XP_002753123.1| PREDICTED: ATP-dependent RNA helicase DDX54, partial [Callithrix
jacchus]
Length = 471
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 95/124 (76%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AAR
Sbjct: 341 TVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSALIVTDLAAR 400
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR
Sbjct: 401 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRS 460
Query: 122 PVLA 125
LA
Sbjct: 461 LTLA 464
>gi|443923379|gb|ELU42631.1| ATP-dependent RNA helicase DBP10 [Rhizoctonia solani AG-1 IA]
Length = 978
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 151/274 (55%), Gaps = 39/274 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++FTATK+HVE++ +L AG S +IY LD AR + +F+ G+ R+LVVTDVAA
Sbjct: 400 QTLIFTATKHHVEHISSLLTAAGYSVAHIYGSLDQAARTHHMNRFRRGRARILVVTDVAA 459
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAG+ G A+S +S EL Y LDL LFLGR
Sbjct: 460 RGIDIPVLENVVNYDFPMGARVFVHRVGRTARAGQKGWAWSFISHSELPYLLDLQLFLGR 519
Query: 121 KPVLADDSMKGKIRHQDG-----MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
P+++ +KG+ R++ + G + +++ I I + +LDA + +++
Sbjct: 520 -PLVS--RLKGEARNESAYTTNLVLGTFLRSYIDEAIESIRSLDQLDASLPSLREVMKRG 576
Query: 176 YKKYVKSRPGASVESVKKVKEL-------------ELATMQVHPLFRNIG---------- 212
+ Y++++ AS S + K + E +HP+F +G
Sbjct: 577 HGLYMRTQGKASTASYARAKTMVKDTTGTWSLAGGESEGAGIHPVFELVGNDKSNQDDSV 636
Query: 213 --------SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+ E + +L ++ +RP TV E G
Sbjct: 637 DKEGNSETAVEAAQLAMLKVVNGFRPAETVFEIG 670
>gi|89269500|emb|CAJ82782.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus (Silurana)
tropicalis]
Length = 437
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 94/119 (78%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F ATK+H EY+ ++L + GI ++IYS LD TARKIN F GK+R L+VTDVAAR
Sbjct: 318 TVIFVATKHHAEYLRELLDMQGIPCSHIYSALDQTARKINLGLFLHGKVRALLVTDVAAR 377
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
GIDIP LD VINYNFP KAKLF+HRVGR ARAGRSG AYSL++ DE+ Y DL LFLGR
Sbjct: 378 GIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSLIAPDEIPYVYDLHLFLGR 436
>gi|430814638|emb|CCJ28161.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +T++HVEY+ K+L +G +YIY LD AR+ A F+ GK +LVVTD+AAR
Sbjct: 504 TIIFVSTRHHVEYLAKLLSFSGYLVSYIYGSLDQVARRNQIASFRAGKTTLLVVTDIAAR 563
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP K K FVHRVGR ARAG+ G AYSLV ++++ Y ++L +FLGRK
Sbjct: 564 GIDIPLLSNVINYDFPSKPKTFVHRVGRTARAGQKGWAYSLVKTEDVPYLIELQIFLGRK 623
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ ++D + Q+ + G + +E I + ++ D + ++K Y K
Sbjct: 624 IISSNDRNPDYV--QNIVLGTFIREKLEYYCEWIAHVLKEDNECSSLKKVMQKGEILYSK 681
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+ AS ES ++ KEL ++ V+PL ++ + + LL K+S Y P TVL+
Sbjct: 682 TAGNASTESNRRAKELIKSSEWSHVNPLLVEHVHENDIAREALLVKISGYSPHETVLDCS 741
Query: 239 KA 240
K+
Sbjct: 742 KS 743
>gi|430811574|emb|CCJ30960.1| unnamed protein product [Pneumocystis jirovecii]
Length = 906
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +T++HVEY+ K+L +G +YIY LD AR+ A F+ GK +LVVTD+AAR
Sbjct: 638 TIIFVSTRHHVEYLAKLLSFSGYLVSYIYGSLDQVARRNQIASFRAGKTTLLVVTDIAAR 697
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP K K FVHRVGR ARAG+ G AYSLV ++++ Y ++L +FLGRK
Sbjct: 698 GIDIPLLSNVINYDFPSKPKTFVHRVGRTARAGQKGWAYSLVKTEDVPYLIELQIFLGRK 757
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ ++D + Q+ + G + +E I + ++ D + ++K Y K
Sbjct: 758 IISSNDRNPDYV--QNIVLGTFIREKLEYYCEWIAHVLKEDNECSSLKKVMQKGEILYSK 815
Query: 182 SRPGASVESVKKVKELELAT--MQVHPLF-RNIGSAEQEKFNLLTKMSEYRPPSTVLEFG 238
+ AS ES ++ KEL ++ V+PL ++ + + LL K+S Y P TVL+
Sbjct: 816 TAGNASTESNRRAKELIKSSEWSHVNPLLVEHVHENDIAREALLVKISGYSPHETVLDCS 875
Query: 239 KA 240
K+
Sbjct: 876 KS 877
>gi|340506877|gb|EGR32929.1| hypothetical protein IMG5_066580 [Ichthyophthirius multifiliis]
Length = 847
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 145/242 (59%), Gaps = 3/242 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHV+ V +L I + IY +DP ARK +F++ ++ VLVVTD+AAR
Sbjct: 260 TIIFASTKYHVDLVSAVLEKFKIENVSIYGKMDPLARKDQINEFKSKRVNVLVVTDLAAR 319
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P + VI+++ P + K+F+HR GR RAG++G Y++VS +E+ Y ++ ++GRK
Sbjct: 320 GIDLPHVQNVIHFDLPAQTKIFIHRSGRTGRAGKTGNIYAMVSMNEIMYINEVCYYVGRK 379
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+D K ++ +G +P L+ED +I + D ++ +Q+ NNA+ +++K
Sbjct: 380 ISEKEDDFSKKDNNK-AYYGVVPSSLIEDTQGKIEILQKEDIEIYKMQQMANNAFIQFLK 438
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGKAR 241
+R AS SVK K + +++PLF N+ E+EK L ++ ++P LE + R
Sbjct: 439 TRESASKVSVKNQKMINRE--KINPLFANLVKDEEEKIAFLNQIRHFKPQQCALEIFQQR 496
Query: 242 FI 243
I
Sbjct: 497 QI 498
>gi|358058122|dbj|GAA96101.1| hypothetical protein E5Q_02762 [Mixia osmundae IAM 14324]
Length = 928
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 151/260 (58%), Gaps = 26/260 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L AG + IY +D AR+ F+ G+ VLVVTD+AAR
Sbjct: 393 TLVFVATKHHVEYISMLLLEAGYAVASIYGSMDQEARRGQLNNFRAGRSNVLVVTDLAAR 452
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L+ V+NY+FP A+ F+HRVGR ARAGR G AYSLV++ EL + LDL LFLGR
Sbjct: 453 GIDIPILENVVNYDFPAGARNFIHRVGRTARAGRPGWAYSLVTTTELPFLLDLELFLGR- 511
Query: 122 PVLA---DDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMN-WVELDADMEGIQKTCNNAY 176
P+ A + +I + + G +P+ ++ ++ + + + ++ ++
Sbjct: 512 PIAACPLKQTSAERIDYSSQLVLGTLPRDRLDQEVEHLASVLLGPSVTLQTLKNVARKGQ 571
Query: 177 KKYVKSRPGASVESVKKVKEL------------ELATMQVHPLFR--NIGSAEQE----K 218
+ Y KS+P AS S ++ K++ E A+M HP+FR + GSA+ + +
Sbjct: 572 RMYEKSQPKASAASHRRAKDMSQLGDGLAGAAKEAASM--HPVFRVSDAGSAQADEAASR 629
Query: 219 FNLLTKMSEYRPPSTVLEFG 238
+LL ++ +RP TV E G
Sbjct: 630 SSLLAALTSFRPAETVFEIG 649
>gi|167382487|ref|XP_001736127.1| DEAD box ATP-dependent RNA helicase [Entamoeba dispar SAW760]
gi|165901566|gb|EDR27644.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba dispar
SAW760]
Length = 684
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 143/242 (59%), Gaps = 17/242 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT++ VEY++++L + I ++ ++ D R+IN KF+ + VL+VTDVAAR
Sbjct: 257 TVVFCATRHEVEYLNEVLKIFDIKTSMMFGKADQQEREINLKKFRKQETHVLLVTDVAAR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VINY+FP KL++HR GR ARAGR G Y+ V +DE+ Y +DL +F
Sbjct: 317 GVDIPELDNVINYDFPATPKLYIHRCGRVARAGRMGKCYNFVQTDEVGYLMDLQVFA--- 373
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ +++ FG IP+ ++ I +I ++ + D+E ++K +N+ Y K
Sbjct: 374 -----------LENKEIEFGVIPRSFIDPYIYQIQETLKGNYDLEFLKKGSDNSLIMYKK 422
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLEFGKA 240
S+P AS E + K K + Q+HP F++ + ++ K L + +YRP STV E +
Sbjct: 423 SKPLASGEGISKAKVFSID--QIHPQFKSQDNKDEILKDQWLKGIKDYRPKSTVFEIDSS 480
Query: 241 RF 242
+
Sbjct: 481 KL 482
>gi|67479813|ref|XP_655288.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472415|gb|EAL49901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703391|gb|EMD43850.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba
histolytica KU27]
Length = 684
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 142/242 (58%), Gaps = 17/242 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT++ VEY+++IL + I ++ ++ D R+IN KF+ + VL+VTDVAAR
Sbjct: 257 TVVFCATRHEVEYLNEILKIFDIKTSIMFGKADQQEREINLKKFRKQETHVLLVTDVAAR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VINY+FP KL++HR GR ARAGR G Y+ V +DE+ Y +DL +F
Sbjct: 317 GVDIPELDNVINYDFPATPKLYIHRCGRVARAGRMGKCYNFVQTDEVGYLMDLQVFA--- 373
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ +++ FG IP+ ++ I +I ++ + D+E ++K +N+ Y K
Sbjct: 374 -----------LENKEIEFGVIPRSFIDPYIYQIQETLKGNYDLEFLKKGSDNSLIMYKK 422
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLEFGKA 240
S+P AS E + K K + Q+HP F++ + ++ K L + YRP STV E +
Sbjct: 423 SKPLASGEGISKAKVFSID--QIHPQFKSQDNKDEILKDQWLKGIKNYRPKSTVFEIDSS 480
Query: 241 RF 242
+
Sbjct: 481 KL 482
>gi|320581590|gb|EFW95810.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Ogataea parapolymorpha DL-1]
Length = 1254
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 146/262 (55%), Gaps = 27/262 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV +L AG ++ YIY LD AR+ F+ G +LVVTDVAAR
Sbjct: 381 TIVFVPTKHHVEYVTLLLKDAGYATAYIYGSLDQHARRRQLLNFRAGLCPILVVTDVAAR 440
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VINY+FP +K+FVHRVGR ARAG SG AYS+V EL Y LDL +FLGRK
Sbjct: 441 GIDIPVLANVINYSFPSSSKIFVHRVGRTARAGNSGWAYSIVGEAELPYLLDLEVFLGRK 500
Query: 122 PVLAD------DSMKGKIRHQDG----------------MFGKIPQGLMEDQISEIMNWV 159
+L +K K Q G + G P+ L+ ++ E+ +
Sbjct: 501 VLLTSMHEKKVQLLKDKYLEQHGSMAGFQEPKLSYTERLVLGSAPRKLI-GELQELYETI 559
Query: 160 -ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL-ELATMQVHPLFRNIGSAEQE 217
+ + D+ ++ + + Y ++R GASVES+++ KE+ L + LF E+E
Sbjct: 560 MKHNYDIRSLKAVADKGEQLYFRTRSGASVESLRRAKEIVNLGWDAQNLLFGKNEELEKE 619
Query: 218 KFNLLTKMSEYRPPSTVLEFGK 239
+F L K+ + TV EFGK
Sbjct: 620 QF--LAKLQNRKNKETVFEFGK 639
>gi|407043198|gb|EKE41803.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 684
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 142/242 (58%), Gaps = 17/242 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT++ VEY+++IL + I ++ ++ D R+IN KF+ + VL+VTDVAAR
Sbjct: 257 TVVFCATRHEVEYLNEILKIFEIKTSIMFGKADQQEREINLKKFRKQETHVLLVTDVAAR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD VINY+FP KL++HR GR ARAGR G Y+ V +DE+ Y +DL +F
Sbjct: 317 GVDIPELDNVINYDFPATPKLYIHRCGRVARAGRMGKCYNFVQTDEVGYLMDLQVFA--- 373
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ +++ FG IP+ ++ I +I ++ + D+E ++K +N+ Y K
Sbjct: 374 -----------LENKEIEFGVIPRSFIDPYIYQIQETLKGNYDLEFLKKGSDNSLIMYKK 422
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLEFGKA 240
S+P AS E + K K + Q+HP F++ + ++ K L + YRP STV E +
Sbjct: 423 SKPLASGEGISKAKVFSID--QIHPQFKSQDNKDEILKDQWLKGIKNYRPKSTVFEIDSS 480
Query: 241 RF 242
+
Sbjct: 481 KL 482
>gi|156846782|ref|XP_001646277.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160380605|sp|A7TGW7.1|DBP10_VANPO RecName: Full=ATP-dependent RNA helicase DBP10
gi|156116952|gb|EDO18419.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 977
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 144/260 (55%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T++HVEY+ ++L +G +Y+Y LD ARK F+ G +LVVTDVAAR
Sbjct: 421 TIVFAPTRHHVEYITQLLKDSGFLVSYLYGTLDQHARKRQLLNFRAGLTSILVVTDVAAR 480
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+ P +K+F+HRVGR ARAG G AYS+VS EL Y LDL LFLG+K
Sbjct: 481 GVDIPMLANVINYSLPASSKIFIHRVGRTARAGNRGWAYSIVSETELPYMLDLELFLGKK 540
Query: 122 PVL----------------ADDSMKG-----KIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
+L AD + + KI + + + G P+ +E N +
Sbjct: 541 ILLTSMYEASCKLMKSKWIADGNTESSFEDPKISYTNRLVLGSAPRYDIESVGDLYKNII 600
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
E + D++ +K A K Y ++R AS ES+K+ KE+ +A+ R + E+EK
Sbjct: 601 ESNFDLQMAKKVSLKAEKLYCRTRTAASPESIKRSKEV-IASGWDEQNIRFGRNLEKEKL 659
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
N L K R TV EFGK
Sbjct: 660 NFLAKFQNRRNKETVFEFGK 679
>gi|294899003|ref|XP_002776456.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239883447|gb|EER08272.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 977
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 152/253 (60%), Gaps = 28/253 (11%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT+++VE+ +L GI++ IY +D T R + +KF++GK VL+VTDVAAR
Sbjct: 303 TIVFVATRHNVEFFASLLTQVGITNAPIYGSMDQTQRTSSLSKFRSGKASVLLVTDVAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP LD VINY+FP +KLFVHR GR ARAG G+ SLV+ D++ Y ++L+LFLGRK
Sbjct: 363 GIDIPQLDYVINYDFPSSSKLFVHRCGRTARAGAKGLCASLVTHDDMPYAVELMLFLGRK 422
Query: 122 ----------PVLADDSMKGKIRHQD-GMFGKIPQGLMEDQISEIMNWVELDADMEGIQK 170
P+ A+ +G++ + + G IP +++++ + V DA++ +Q+
Sbjct: 423 LGLQALGSDHPIPAEGEGEGEVDEKRLCVIGGIPS--VQEEVETVRRLVSGDAELASLQR 480
Query: 171 TCNNAYKKYVKSRPGASVESVKKVK---ELELATMQ-----VHPLFR---NIGSAE---- 215
+ +AY Y K+RP AS +SV++ K E Q HP FR ++GS
Sbjct: 481 SMMSAYHLYYKTRPAASNQSVRRAKLILRAEAGGPQRLLDTPHPAFRTAADLGSQSVEDM 540
Query: 216 QEKFNLLTKMSEY 228
+EK +++ ++ +
Sbjct: 541 KEKLDMIAQLRTF 553
>gi|449546419|gb|EMD37388.1| hypothetical protein CERSUDRAFT_135966 [Ceriporiopsis subvermispora
B]
Length = 945
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 146/256 (57%), Gaps = 19/256 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L AG + ++IY LD AR +F+ G VLVVTDVAA
Sbjct: 387 QTLIFAATKHHVEYLTNMLSTAGYAVSHIYGSLDQLARTQQMDRFRRGHTNVLVVTDVAA 446
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S +++ EL Y LDL LFLGR
Sbjct: 447 RGIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRQGWAWSFITNPELPYLLDLQLFLGR 506
Query: 121 KPVLADDSMKG-KIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
P+ ++ + G ++ + + G + +++++ I E + ++ ++ + Y
Sbjct: 507 -PIKSEVTESGDRVYTESLILGPFERDKVDEEVDFIRKLDEKNHNLPTMRDVMRKGHGMY 565
Query: 180 VKSRPGASVESVKKVKE--------LELATMQVHPL-FRNIG--------SAEQEKFNLL 222
+S+ AS S K+ KE L + HP+ FRN S E + LL
Sbjct: 566 ERSKGKASPASYKRAKEMMKEGKWGLVGSGSGAHPIFFRNKDGSDATTKISEEARRNTLL 625
Query: 223 TKMSEYRPPSTVLEFG 238
++ +RP TVLE G
Sbjct: 626 RAVNSFRPAETVLEIG 641
>gi|409044923|gb|EKM54404.1| hypothetical protein PHACADRAFT_258225 [Phanerochaete carnosa
HHB-10118-sp]
Length = 852
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 146/256 (57%), Gaps = 19/256 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG + ++IY LD AR F+ G +LVVTDVAA
Sbjct: 295 QTLVFAATKHHVEYLTNLLTSAGYAVSHIYGSLDQAARTQQMEHFRRGYTSILVVTDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR+G A+S +++ EL Y LDL LFLGR
Sbjct: 355 RGIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRTGWAWSFITNSELPYLLDLQLFLGR 414
Query: 121 KPVLADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
P+ ++ + G + D + G + +++++ I E D ++ +++ + Y
Sbjct: 415 -PIKSEVATDGDQPYTDSLILGPFDRDRVDEEVEYIKKLDEEDHNLAPLREVMRKGHGMY 473
Query: 180 VKSRPGASVESVKKVK--------ELELATMQVHP-LFRNI-GSA-------EQEKFNLL 222
+S+ AS S + K L T HP L R+ GS+ E+ + LL
Sbjct: 474 ERSKGKASQASYNRAKVMMKEPKNGLMGLTSTPHPVLLRSKDGSSIAKKLGEEKRRKELL 533
Query: 223 TKMSEYRPPSTVLEFG 238
+S +RP TVLE G
Sbjct: 534 MAVSAFRPAETVLEIG 549
>gi|169847756|ref|XP_001830587.1| ATP-dependent RNA helicase DBP10 [Coprinopsis cinerea okayama7#130]
gi|116508323|gb|EAU91218.1| ATP-dependent RNA helicase DBP10 [Coprinopsis cinerea okayama7#130]
Length = 949
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 144/253 (56%), Gaps = 20/253 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G S ++IY LD AR I KF+ G +LVVTDVAA
Sbjct: 396 QTLIFAATKHHVEYLTNLLITVGYSVSHIYGSLDQVARSIQMDKFRKGLTNLLVVTDVAA 455
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L V+NY+FP A++FVHRVGR ARAGR G A+S +++ EL Y LDL LFL R
Sbjct: 456 RGIDIPVLQNVVNYDFPHGARVFVHRVGRTARAGRPGWAWSFITNSELPYLLDLQLFLAR 515
Query: 121 KPVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
V +++ G H ++ + G + +++++ + +++ + +++ +
Sbjct: 516 PLV---NTVPGDEDHFYTENLVLGTFGRETLDEEVEYTRSLDDVNHSLPSLRQVMIRGHT 572
Query: 178 KYVKSRPGASVESVKKVKE--------LELATMQVHP-LFRNIGSAEQEKF-----NLLT 223
Y +S+ AS S K+ KE L + +HP L R G+ +Q K NLL
Sbjct: 573 LYERSKGKASPASYKRAKEMMKDPKWLLAGSDSSIHPVLLRGSGAEDQRKLQEARANLLR 632
Query: 224 KMSEYRPPSTVLE 236
+S ++P TV E
Sbjct: 633 AVSSFKPSETVFE 645
>gi|403414414|emb|CCM01114.1| predicted protein [Fibroporia radiculosa]
Length = 960
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 146/256 (57%), Gaps = 19/256 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG S ++IY LD TAR +F+ G+ +LVVTDVAA
Sbjct: 400 QTLVFAATKHHVEYLTNLLTSAGYSVSHIYGSLDQTARTQQMDQFRRGRTNILVVTDVAA 459
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S V++ EL Y LDL LFLG
Sbjct: 460 RGIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRQGWAWSFVTNSELPYLLDLQLFLGH 519
Query: 121 KPVLADDSMKGKIRHQDG-MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
P+ + S G + + + G + +++++ I + ++ ++ + Y
Sbjct: 520 -PIKNEVSDGGDQAYTESFVLGPFDRDQLDEEVEYIRKLENDNHNLTTLRDVMKKGHGMY 578
Query: 180 VKSRPGASVESVKKVKE--------LELATMQVHPLF------RNIGS---AEQEKFNLL 222
+S+ AS S K+ KE L A +HP+F N+ + E ++ LL
Sbjct: 579 ERSKGKASQVSYKRAKEMIKEGKWGLVGADSGIHPVFFRSKDGSNVSTKLAGEAKRKALL 638
Query: 223 TKMSEYRPPSTVLEFG 238
++ ++P TVLE G
Sbjct: 639 KAVNAFKPLETVLEIG 654
>gi|428163077|gb|EKX32169.1| hypothetical protein GUITHDRAFT_121663 [Guillardia theta CCMP2712]
Length = 914
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 7/230 (3%)
Query: 10 YHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLD 69
+HVEYVH +L GI + +Y +DP ARKI +F+ + L+VTDVAARG+DIP L+
Sbjct: 385 HHVEYVHALLASVGIEACMLYGAMDPAARKIAIGRFRAKLSQYLIVTDVAARGVDIPLLE 444
Query: 70 AVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLADDSM 129
VIN+NFP KAKLFVHRVGR ARAGRSG AYSLV +++ +DL LFLGR P+ D
Sbjct: 445 NVINHNFPGKAKLFVHRVGRAARAGRSGTAYSLVGPEDVALMIDLHLFLGR-PLQTSDQS 503
Query: 130 KGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVE 189
+ + + +G++PQ L+++ + + ++D+ A Y K+ S +
Sbjct: 504 EEENSFE-AFYGRMPQSLLDESQEIVQRLLHDNSDLAAALAVAQRALGLYKKTMEKPSSQ 562
Query: 190 SVKKVKELELATMQVHPLF-RNIGSAE--QEKFNLLTKMSEYRPPSTVLE 236
S+++ KE++ +HP F ++ + E + L + +RP +VLE
Sbjct: 563 SIRRAKEMDEDA--IHPWFLSDVDACEVAGQGRQFLKALQHFRPQQSVLE 610
>gi|302679352|ref|XP_003029358.1| hypothetical protein SCHCODRAFT_257992 [Schizophyllum commune H4-8]
gi|300103048|gb|EFI94455.1| hypothetical protein SCHCODRAFT_257992 [Schizophyllum commune H4-8]
Length = 924
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 16/253 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L AG + ++IY LD TAR +F+ G +LVVTDVAA
Sbjct: 393 QTLIFAATKHHVEYLTTLLSTAGYAVSHIYGSLDQTARSQQMERFRRGITTILVVTDVAA 452
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S V++ EL Y LDL LFLGR
Sbjct: 453 RGIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRQGWAWSFVTNTELPYLLDLQLFLGR 512
Query: 121 KPVLADDSMKG-KIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
P+ D G ++ ++ + G + +++ + I++ + + + ++ + Y
Sbjct: 513 -PLRPDAPPGGDEVFAENLILGTFRRESIDEDMEYIVSLHDTEHSLAMQKQVMQRGQRMY 571
Query: 180 VKSRPGASVESVKKVKE--------LELATMQVHP-LFRNIGSAEQEKFN-----LLTKM 225
+S+ AS S K+ K+ L VHP L R G E+ + +L +
Sbjct: 572 ERSQGKASPPSYKRAKDILRDPKWMLTGTQTGVHPVLLRGEGEVEKRQTEEARKAILQAV 631
Query: 226 SEYRPPSTVLEFG 238
S +RP TV E G
Sbjct: 632 STFRPAETVFEVG 644
>gi|260942725|ref|XP_002615661.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
gi|238850951|gb|EEQ40415.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
Length = 955
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV +L AG +YIY LD ARK +F+ G +LVVTDVAAR
Sbjct: 415 TIVFVPTKHHVEYVTGLLRDAGYLVSYIYGSLDQRARKEQLYRFRIGLTTLLVVTDVAAR 474
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 475 GIDIPILANVVNYTLPASSKIFIHRVGRTARAGNKGWAYSIVNEQELPYLLDLELFLGKK 534
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
++ DD ++ KI + D + G +P+ +E+ + + + D+
Sbjct: 535 ILVTSMHEKKCELMKASKGDDYVEPKISYTDRLVLGSLPRIQLENSQEMYESLLRHNYDL 594
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM--QVHPLFRNIGSAEQEKFNLLT 223
+ I+ K Y ++R AS ESVK+ KEL + + H +F E+EKF L
Sbjct: 595 KVIKDVAAKGEKLYHRTRQAASTESVKRTKELVQTGLWDEQHLIFGPNLEKEKEKF--LA 652
Query: 224 KMSEYRPPSTVLEFGK 239
++ TV E+ K
Sbjct: 653 SLANRNIKETVFEYSK 668
>gi|403217984|emb|CCK72476.1| hypothetical protein KNAG_0K01110 [Kazachstania naganishii CBS
8797]
Length = 1001
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 142/261 (54%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 441 TVVFVPTRHHVEYISQVLKDCGYLVSYIYGSLDQNARKSQLYNFRLGLTSILVVTDVAAR 500
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+ P +K+F+HRVGR ARAG G AY++VS EL Y LDL LFL +K
Sbjct: 501 GVDIPMLANVINYSLPSSSKIFIHRVGRTARAGNKGWAYTIVSESELPYLLDLELFLSKK 560
Query: 122 ----PVL--------------ADDSMKGK---IRHQDGM-FGKIPQGLMEDQISEIMNWV 159
P+L +D M K + + D + G P+ +E N +
Sbjct: 561 VLLTPMLEAKNAILKQKWIDQGNDEMSFKPPAVSYTDRIVLGSCPRLDLESMGDLFKNIL 620
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGS-AEQEK 218
E + D+ ++ T A K Y ++R AS+ES+K+ KE+ + + GS E+EK
Sbjct: 621 ENNFDLSLMKATSLKAEKLYFRTRTHASLESLKRSKEVIASGWDEQNII--FGSNVEKEK 678
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
N L K+ R TV EF +
Sbjct: 679 INFLAKLQNRRNKETVFEFSR 699
>gi|444315728|ref|XP_004178521.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
gi|387511561|emb|CCH59002.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
Length = 929
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 139/245 (56%), Gaps = 9/245 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +Y+Y LD AR+ +F G R+LVVTDVAAR
Sbjct: 396 TIIFVPTRHHVEYISQLLMKCGYLVSYLYGTLDQHARRNQLRQFCFGITRILVVTDVAAR 455
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+ P +K+FVHRVGR ARAG G AYS+VS EL Y ++L FLG+K
Sbjct: 456 GVDIPLLPNVINYSLPGSSKIFVHRVGRTARAGNRGWAYSIVSESELPYLVELGTFLGKK 515
Query: 122 PVLADDSMK-----GKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
+ K KI + M G P+ +E N + + D++ +KTC A
Sbjct: 516 VITTGMVEKLGVSFDKISYNKWMVLGSGPRVDVESFGDLYKNVYDQEFDLQMSKKTCEKA 575
Query: 176 YKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSA-EQEKFNLLTKMSEYRPPSTV 234
K Y+++R GAS +SVK+ KEL L + G E+ K LL K + + TV
Sbjct: 576 EKLYLRTRGGASNDSVKRSKELILQKWDGQNV--KFGQDLERAKLELLNKFALRKNKETV 633
Query: 235 LEFGK 239
EFGK
Sbjct: 634 FEFGK 638
>gi|118360242|ref|XP_001013358.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|89295125|gb|EAR93113.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 1130
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 148/240 (61%), Gaps = 5/240 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VF +TKYHV+ + IL IS+ IY +D ARK ++F+ K V+VVTD+A+R
Sbjct: 544 SIVFASTKYHVDLICAILDKFNISNVSIYGKMDAFARKDQISEFRNKKCNVMVVTDLASR 603
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P+++ VI+Y++P K+F+HR GR ARAGR G Y+L+ +E+ Y ++++ GRK
Sbjct: 604 GIDLPNVNNVIHYDYPASTKIFIHRSGRTARAGRKGNTYALMGMNEIMYVSEIMVLAGRK 663
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ MK + ++G IP L+ D+ ++I ++ D ++ +Q+ NNAY ++ K
Sbjct: 664 LSNQVEDMKDTSK---AIYGAIPVQLIGDEQAKIQILLKEDIEINKMQQLANNAYIQFNK 720
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGKAR 241
SR AS S+K ++++ + ++PLF E+EK + L+K+ Y+P + LE K R
Sbjct: 721 SRSSASKASIKDSYQVKIDS--INPLFHKFAEDEKEKMDYLSKIKNYKPAISALEIYKQR 778
>gi|219116929|ref|XP_002179259.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409150|gb|EEC49082.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 476
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 123/209 (58%), Gaps = 26/209 (12%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
++++F AT++HVEYV +L AG + IY LD ARKIN A F++GK +LV TDVAA
Sbjct: 271 LSLIFAATRHHVEYVTTLLIAAGFDAVMIYGTLDQEARKINLAAFRSGKRPILVTTDVAA 330
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P +D VI+Y+FP KLFVHR GR ARAGR G + L+ DEL Y ++L LFLGR
Sbjct: 331 RGIDVPLIDHVIHYHFPSSPKLFVHRSGRAARAGRIGYCWGLIEPDELPYMIELHLFLGR 390
Query: 121 KPVLAD---------------DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV--ELDA 163
KP+ A+ + M + H +G +P+ ++ ++ + + EL
Sbjct: 391 KPMSAEQKTDDGKTIETTYTLNEMSPDMVH----YGCVPESILTMEVENVQRIMDSELSG 446
Query: 164 DME-----GIQKTCNNAYKKYVKSRPGAS 187
+E + K C NA K+Y ++R AS
Sbjct: 447 SLEAESLRALTKVCKNAMKQYRRTRTEAS 475
>gi|150866736|ref|XP_001386424.2| hypothetical protein PICST_80003 [Scheffersomyces stipitis CBS
6054]
gi|158514831|sp|A3LZT3.2|DBP10_PICST RecName: Full=ATP-dependent RNA helicase DBP10
gi|149387992|gb|ABN68395.2| ATP dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 931
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 141/256 (55%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEY+ +L AG +YIY LD ARK +F+ G VLVVTDVAAR
Sbjct: 396 TIVFVPTKHHVEYITTLLRDAGYLVSYIYGTLDQHARKNQLYQFRLGMTTVLVVTDVAAR 455
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 456 GIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 515
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L D+ ++ K+++ D + G P+ +E N + ++
Sbjct: 516 ILLTAMQEQKCQLLKDKQGDNYVEPKVQYTDRLVLGSCPRLSLETFEELYENLLRNHYEL 575
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
I++ K Y ++R AS ESVK+ KE ++ T H LF E+EKF L
Sbjct: 576 SVIKEVAAKGEKLYYRTRKAASTESVKRAKEIMDTGTWDDQHLLFGPNLEKEKEKF--LA 633
Query: 224 KMSEYRPPSTVLEFGK 239
K++ TV EF K
Sbjct: 634 KLANRHVKETVFEFNK 649
>gi|294875674|ref|XP_002767430.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
gi|239868997|gb|EER00148.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
Length = 952
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 152/259 (58%), Gaps = 38/259 (14%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT+++VE+ +L GI++ IY +D T R + +KF++GK VL+VTDVAAR
Sbjct: 292 TIVFVATRHNVEFFASLLTQVGITNAPIYGSMDQTQRTSSLSKFRSGKASVLLVTDVAAR 351
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLL----- 116
GIDIP LD VINY+FP +KLFVHR GR ARAG G+ SLV+ D++ Y ++L+L
Sbjct: 352 GIDIPQLDYVINYDFPSSSKLFVHRCGRTARAGAKGLCASLVTHDDMPYAVELMLFLGMP 411
Query: 117 --FLGRK----PVLADDSM--KGKIRHQDG-------MFGKIPQGLMEDQISEIMNWVEL 161
FLGRK P+ +D +G++ DG + G IP +++++ + V
Sbjct: 412 SQFLGRKLGLQPLGSDHPFPAEGEV-GGDGVDEKRLCVIGGIPS--VQEEVETVRRLVSG 468
Query: 162 DADMEGIQKTCNNAYKKYVKSRPGASVESVKKVK---ELELATMQ-----VHPLFR---N 210
DA++ +Q++ +AY Y K+RP AS +SV++ K E Q HP FR +
Sbjct: 469 DAELASLQRSMMSAYHLYYKTRPAASNQSVRRAKLILRAEAGGPQRLLDTPHPAFRTAAD 528
Query: 211 IGSAE----QEKFNLLTKM 225
+GS +EK +++ ++
Sbjct: 529 LGSQSVEDVKEKLDMIAQL 547
>gi|410077309|ref|XP_003956236.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
gi|372462820|emb|CCF57101.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
Length = 973
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 141/260 (54%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD AR F+ G +LVVTDVAAR
Sbjct: 418 TIIFVPTRHHVEYISQLLKDCGYLVSYIYGTLDQRARNRQLYNFRLGLTSILVVTDVAAR 477
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VIN++ P +K+FVHRVGR ARAG G AYS+VS +EL Y LDL LFLG+K
Sbjct: 478 GVDIPMLANVINFSLPVSSKVFVHRVGRTARAGNRGWAYSIVSENELPYLLDLELFLGKK 537
Query: 122 PVLAD------DSMKGK--------IRHQDG--------MFGKIPQGLMEDQISEIMNWV 159
+L D MK K + QD + G P+ +ED +
Sbjct: 538 ILLTSMYDATCDIMKKKWVSEGKSELTFQDPKPSYTNRMVLGSAPRLQVEDLNDLYTGVL 597
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
D++ +++T A K Y ++R AS ES+K+ KE+ L+ + R + E+EKF
Sbjct: 598 SGSFDLKMMKQTALKAEKLYFRTRTSASPESMKRSKEIILSGWDEQNI-RFGKNVEKEKF 656
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
L K+ TV EF +
Sbjct: 657 QFLAKLQNRHNKETVFEFAR 676
>gi|366991885|ref|XP_003675708.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
gi|342301573|emb|CCC69343.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
Length = 977
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 142/259 (54%), Gaps = 23/259 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ +L +G +YIY LD ARK F+TG +LVVTDVAAR
Sbjct: 422 TILFVPTRHHVEYISNLLRESGYLISYIYGTLDQHARKRQLYNFRTGLTSILVVTDVAAR 481
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VIN++ P +K+FVHRVGR ARAG G AYS+VS EL Y LDL +FLG+K
Sbjct: 482 GVDIPMLANVINFSLPASSKIFVHRVGRTARAGNRGWAYSIVSESELPYLLDLEIFLGKK 541
Query: 122 PVLAD--DSMKG-------------------KIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
++ DSM K+ + + M G P+ +E N +
Sbjct: 542 ILMTPMYDSMSDIMLKKWIAEGHDEINFKPPKVSYTNRMILGSAPRLELEGLGDLYQNVM 601
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
+ + +++ ++ A K Y ++RP AS ES+K+ KE+ + + +AE+EK
Sbjct: 602 KSNFEIQLLKGVAMKAEKLYFRTRPAASPESLKRSKEIIASGWDEQNIMFG-KNAEKEKL 660
Query: 220 NLLTKMSEYRPPSTVLEFG 238
+ L K+ R TV EF
Sbjct: 661 DFLAKLQNRRNKETVFEFA 679
>gi|328864018|gb|EGG13117.1| hypothetical protein MELLADRAFT_32308 [Melampsora larici-populina
98AG31]
Length = 966
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 142/266 (53%), Gaps = 32/266 (12%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG ++IY LD AR+ F+ G+ +LVVTD+AA
Sbjct: 428 QTIVFAATKHHVEYLTGLLVSAGYRVSHIYGALDQAARRNQLNAFRAGRTNILVVTDLAA 487
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+FP A+ FVHRVGR ARAGR G AYSLV+ EL Y +DL LFL R
Sbjct: 488 RGIDIPILENVINYDFPSSARAFVHRVGRTARAGRKGWAYSLVTQTELPYLMDLQLFLSR 547
Query: 121 K----PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIM-NWVELDADMEGIQKTCNNA 175
P+ + S + + G +P+ ++ + + V ++ + + + A
Sbjct: 548 PLLTCPLHPEVSQNPDF-SANLVLGTLPRERLDSEAEYVRETLVGPNSSLVALTEVVRRA 606
Query: 176 YKKYVKSRPGASVESVKKVKELELA----------TMQVHPLF-------------RNIG 212
K Y++S+ AS ES ++ K L LA HP+F + G
Sbjct: 607 QKMYIRSQSTASAESYRRSKALVLAGEGLTGTSKEEAATHPIFGAPSPETVAALTSKRKG 666
Query: 213 SAEQEKFNLLTKMSEYRPPSTVLEFG 238
+ E LL K++++ P TV E G
Sbjct: 667 PSRDE---LLAKVNKFTPTETVFEIG 689
>gi|154336403|ref|XP_001564437.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061472|emb|CAM38500.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 803
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 148/246 (60%), Gaps = 15/246 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVEY+ IL GIS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 273 ALIFVESKFHVEYLQMILTTYGISASAVHGQMDQEARRLAVRSFAKRETTVMVVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYSL++ ++ YY+DL+ F+GR
Sbjct: 333 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSLMTFEDFPYYIDLMQFIGRP 392
Query: 122 PVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L + G + DG +G++P+ ++ ++ + E D ++ + + +A+ K+
Sbjct: 393 --LQSAPVPGDLLFTPDDGCYGRLPEEDIQLELDFLKRLHENDVEVRNMARVVEHAHTKF 450
Query: 180 VKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRPPS 232
+++ ++ E++++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 451 NRTKKKSTHEAIQEARKPQYAFDRTPLHPMLLERLGSTRLRADEARFDL----KRFKPKE 506
Query: 233 TVLEFG 238
LE G
Sbjct: 507 LFLEMG 512
>gi|294658755|ref|XP_461087.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
gi|218512019|sp|Q6BL34.2|DBP10_DEBHA RecName: Full=ATP-dependent RNA helicase DBP10
gi|202953360|emb|CAG89469.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
Length = 932
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 143/257 (55%), Gaps = 22/257 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV +L AG +YIY LD ARK +F+ G +LVVTDVAAR
Sbjct: 393 TIIFVPTKHHVEYVTTLLKDAGYLVSYIYGTLDQHARKQQLYQFRIGMTSLLVVTDVAAR 452
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY P +K+F+HRVGR ARAG SG AYS+V+ EL Y LDL LFLGRK
Sbjct: 453 GIDIPILANVVNYTLPGSSKIFIHRVGRTARAGNSGWAYSIVNEKELPYLLDLELFLGRK 512
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L + + ++ K+ + D + G IP+ +E N + ++
Sbjct: 513 VLLTSMHEKKCEMLKTKQSSNYVEPKVSYTDRLVLGSIPRVDIETFQELYENILRNHYEL 572
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQ---VHPLFRNIGSAEQEKFNLL 222
++ K Y ++R AS ES+K+ KE+ L+T H LF E+EKF L
Sbjct: 573 SVVKGVATKGEKLYYRTRQSASQESLKRSKEI-LSTGNWDDQHLLFGPNLEKEKEKF--L 629
Query: 223 TKMSEYRPPSTVLEFGK 239
T++ + TV EF K
Sbjct: 630 TQLLNRKSKETVFEFNK 646
>gi|223590189|sp|A5DLR3.2|DBP10_PICGU RecName: Full=ATP-dependent RNA helicase DBP10
gi|190347777|gb|EDK40116.2| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 136/251 (54%), Gaps = 17/251 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV +L AG +YIY LD ARK +F+ +LVVTDVAAR
Sbjct: 391 TIVFVPTKHHVEYVTTLLRDAGHLVSYIYGTLDQHARKQQLYQFRAAYTNILVVTDVAAR 450
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 451 GIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 510
Query: 122 PVLAD-DSMKGKIRHQDGM------------FGKIPQGLMEDQISEIMNWVELDADMEGI 168
+L K +I H+ G+ G P+ +E N + ++ I
Sbjct: 511 VLLTQMHEKKVQICHEKGLSAPEVSYKDRLVLGSAPRVDIESSQELCDNLLRNHYELRTI 570
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAEQEKFNLLTKMS 226
+ N Y ++R AS ESVK+ KE+ A H LF E+EKF L K++
Sbjct: 571 RDVANKGEILYYRTRQPASQESVKRAKEIMDTGAWDDQHLLFGANLEKEKEKF--LAKLA 628
Query: 227 EYRPPSTVLEF 237
+ + TV EF
Sbjct: 629 DRKVKETVFEF 639
>gi|164660566|ref|XP_001731406.1| hypothetical protein MGL_1589 [Malassezia globosa CBS 7966]
gi|159105306|gb|EDP44192.1| hypothetical protein MGL_1589 [Malassezia globosa CBS 7966]
Length = 948
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 126/203 (62%), Gaps = 6/203 (2%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G + ++IYS LD AR I F++G+ +L+VTD+AA
Sbjct: 372 QTIIFCATKHHVEYLLLLLTTMGYTCSHIYSSLDQAARSIQMNLFRSGQTSLLIVTDLAA 431
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ VINY+FP + ++FVHRVGR ARAGR G A+SL + EL Y DL LFL R
Sbjct: 432 RGIDLPVLEHVINYDFPPQPRIFVHRVGRTARAGRRGWAWSLCTHAELPYLCDLQLFLAR 491
Query: 121 KPVLADDSMKGKIR--HQDGMFGKIPQGLMEDQISEIMNWVELDAD----MEGIQKTCNN 174
V + + + H + G P+ +++D+ I + + +++D + +
Sbjct: 492 PLVSSHTLPRDDVHDLHGTMVLGTFPREVLDDECESIRHAMHVESDTATTFDSLTGVVKR 551
Query: 175 AYKKYVKSRPGASVESVKKVKEL 197
A+ Y++S+P AS ES ++ K++
Sbjct: 552 AHNMYMRSQPKASAESYRRTKDM 574
>gi|401428549|ref|XP_003878757.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495006|emb|CBZ30309.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 804
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 146/248 (58%), Gaps = 19/248 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVE++ IL IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 273 ALIFVESKFHVEFLQMILTAYSISTSAVHGQMDQEARRLAVRSFAKRETSVMVVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DL+ F+GR
Sbjct: 333 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYVDLMQFIGRP 392
Query: 121 ---KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
PV D DG +G++P+ ++ ++ + E D ++ + + NA+K
Sbjct: 393 LQSAPVPGDLLFTA----DDGCYGRLPEEDIQLELDFLKRLHENDVEVRNMARVVQNAHK 448
Query: 178 KYVKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRP 230
K+ +++ S E++++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 449 KFNRTKKKPSHEAIQEARKPQYAFDRTPLHPMLLERLGSTRVRADEVRFDL----KRFKP 504
Query: 231 PSTVLEFG 238
LE G
Sbjct: 505 KELFLEIG 512
>gi|367006623|ref|XP_003688042.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
gi|357526349|emb|CCE65608.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
Length = 981
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 139/262 (53%), Gaps = 27/262 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T++HVEY+ +L G +Y+Y LD ARK F+ G +LVVTDVAAR
Sbjct: 425 TIVFVPTRHHVEYISNLLKDCGYLVSYLYGTLDQHARKHQLFNFRAGLTSILVVTDVAAR 484
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+ P +K+FVHRVGR ARAG G AYS+ S EL Y LDL LFLG+K
Sbjct: 485 GVDIPMLANVINYSLPASSKIFVHRVGRTARAGNKGWAYSIASETELPYLLDLELFLGKK 544
Query: 122 PVLAD---------------------DSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
+L K + D M G P+ +E+ N +
Sbjct: 545 ILLTQMYEATCSLAKNKWIAAGNEEYTFQPPKPSYTDRMILGSCPRLELENIGDLYKNIM 604
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLF-RNIGSAEQE 217
D++ +KT A K Y ++R AS ES+K+ KEL + + H +F +N+ E+E
Sbjct: 605 SASFDLQMAKKTSLKAEKLYFRTRTAASPESIKRGKELIASGWDEQHIMFGKNV---EKE 661
Query: 218 KFNLLTKMSEYRPPSTVLEFGK 239
K + L+K TV EFG+
Sbjct: 662 KLDFLSKFQNRNNKETVFEFGR 683
>gi|392593758|gb|EIW83083.1| ATP-dependent RNA helicase DBP10 [Coniophora puteana RWD-64-598
SS2]
Length = 845
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 136/262 (51%), Gaps = 31/262 (11%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L AG + ++IY LD AR+ +F+ G +LVVTDVAA
Sbjct: 296 QTLIFAATKHHVEYLANLLSSAGYAVSHIYGALDQAARQFQMEQFRRGHTSLLVVTDVAA 355
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S V+ EL Y LDL LFLGR
Sbjct: 356 RGIDIPVLENVVNYDFPHGARVFVHRVGRTARAGRQGWAWSFVTHTELPYLLDLQLFLGR 415
Query: 121 KPVLADDSMKGKIRHQDG--------MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTC 172
+ G++ G +FG + +++ + + E + ++
Sbjct: 416 -------PLSGEVPSDSGDEAYTESLIFGPFGREEIDEDVEYVRQLDEAYHQLPTLRDVM 468
Query: 173 NNAYKKYVKSRPGASVESVKKVKELE---------LATMQVHPLFRNIG-------SAEQ 216
+ Y +S+ AS S K+ KE+ VHP+ G EQ
Sbjct: 469 KRGHMMYERSKGKASQASYKRAKEMSKDHQWSLAGATEASVHPILVQRGWRSAKGSDVEQ 528
Query: 217 EKFNLLTKMSEYRPPSTVLEFG 238
+ L+ ++ + P TV E G
Sbjct: 529 ARSKLMQVVNSFTPSETVFEVG 550
>gi|1279685|emb|CAA96458.1| unknown [Saccharomyces cerevisiae]
gi|1431010|emb|CAA98590.1| DBP10 [Saccharomyces cerevisiae]
Length = 995
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 435 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG+K
Sbjct: 495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKK 554
Query: 122 PVLAD------DSMK------GKIRHQDG----------MFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 555 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 614
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG-SAEQEK 218
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F G + E+EK
Sbjct: 615 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAF--FGKNEEKEK 672
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 673 LDFLAKLQNRRNKETVFEFTR 693
>gi|207346902|gb|EDZ73254.1| YDL031Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 846
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 286 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 345
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG K
Sbjct: 346 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGEK 405
Query: 122 PVLAD------DSMK------GKIRHQ----------DGMFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 406 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 465
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F + E+EK
Sbjct: 466 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAFFG-KNEEKEKL 524
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 525 DFLAKLQNRRNKETVFEFTR 544
>gi|259145212|emb|CAY78476.1| Dbp10p [Saccharomyces cerevisiae EC1118]
gi|349577043|dbj|GAA22212.1| K7_Dbp10p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 995
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 435 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG+K
Sbjct: 495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKK 554
Query: 122 PVLAD------DSMK------GKIRHQ----------DGMFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 555 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 614
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG-SAEQEK 218
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F G + E+EK
Sbjct: 615 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAF--FGKNEEKEK 672
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 673 LDFLAKLQNRRNKETVFEFTR 693
>gi|365766492|gb|EHN07988.1| Dbp10p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 899
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 140/261 (53%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 339 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 398
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG K
Sbjct: 399 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGEK 458
Query: 122 PVLAD------DSMK------GKIRHQ----------DGMFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 459 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 518
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG-SAEQEK 218
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F G + E+EK
Sbjct: 519 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAF--FGKNEEKEK 576
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 577 LDFLAKLQNRRNKETVFEFTR 597
>gi|50291719|ref|XP_448292.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690788|sp|Q6FNA2.1|DBP10_CANGA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49527604|emb|CAG61253.1| unnamed protein product [Candida glabrata]
Length = 969
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 148/263 (56%), Gaps = 29/263 (11%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF T++HVEY+ +L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 410 TVVFVPTRHHVEYLSNLLKDCGYLVSYIYGALDQHARKSQLYNFRIGLTSILVVTDVAAR 469
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L V+NY+ P +K+F+HRVGR ARAG G AYS+VS +EL Y LDL LFLGRK
Sbjct: 470 GVDIPMLANVVNYSLPASSKIFIHRVGRTARAGNRGWAYSIVSENELPYLLDLELFLGRK 529
Query: 122 PVLA-------------------DDSM--KGKIRHQDGM-FGKIPQGLMEDQISEI-MNW 158
+L D+++ KI + M G P+ +E +SE+ N
Sbjct: 530 ILLTPMYEALERLSKEKWVAEGNDETLFQSPKISYTSRMVLGSCPRLDIE-ALSELYNNL 588
Query: 159 VELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATMQVHPLF-RNIGSAEQ 216
++ + D++ +KT A K Y ++R AS ES+K+ KE + + + LF +N+ E+
Sbjct: 589 MKSNFDLDMAKKTALKAEKLYFRTRTSASPESLKRSKEIISSGWDEQNVLFGKNL---EK 645
Query: 217 EKFNLLTKMSEYRPPSTVLEFGK 239
EK L K+ R TV EF +
Sbjct: 646 EKNAFLEKLQNRRNKETVFEFTR 668
>gi|330443505|ref|NP_010253.2| Dbp10p [Saccharomyces cerevisiae S288c]
gi|341940422|sp|Q12389.2|DBP10_YEAST RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|329138871|tpg|DAA11821.2| TPA: Dbp10p [Saccharomyces cerevisiae S288c]
gi|392300086|gb|EIW11177.1| Dbp10p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 995
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 435 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG+K
Sbjct: 495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKK 554
Query: 122 PVLAD------DSMK------GKIRHQ----------DGMFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 555 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 614
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG-SAEQEK 218
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F G + E+EK
Sbjct: 615 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAF--FGKNEEKEK 672
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 673 LDFLAKLQNRRNKETVFEFTR 693
>gi|388581211|gb|EIM21521.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 929
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 147/265 (55%), Gaps = 27/265 (10%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++FTATK+HVEY++ +L AG + ++Y LD TAR++ +F+ G +LVVTDVAA
Sbjct: 375 QTIIFTATKHHVEYLNTLLKAAGYAVAHVYGSLDQTARQLQMDQFRRGVSSILVVTDVAA 434
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P + VINY+FP A++F+HRVGR ARAGR G A+S +++ EL Y LDL LFL R
Sbjct: 435 RGIDLPGCENVINYDFPTGARIFIHRVGRTARAGRKGTAWSFITNSELPYLLDLSLFLAR 494
Query: 121 KPVLADDSMKGKIRHQD------GMFGKIPQGLMEDQISEIMNWVELDA-DMEGIQKTCN 173
P+++ S K + ++ G IP+ ++ + + V +A ++ +
Sbjct: 495 -PLVSPTSPTNKNKEEELASKNTLTIGTIPRDTLDPYVEYLSGAVLNEAPNLPSLHGVMM 553
Query: 174 NAYKKYVKSRPGASVESVKKVKEL-----------ELATMQVHPLFRNIGS--------A 214
+ Y +S+ AS ES ++ K++ +HP F +
Sbjct: 554 RGHGLYERSQGKASAESYRRAKDIIKDARWGFAGTSGEDKAMHPSFAGTAAETLQVDEET 613
Query: 215 EQEKFNLLTKMSEYRPPSTVLEFGK 239
+++ +LL ++ +RP TV E G+
Sbjct: 614 AKKRADLLAVVNGFRPNETVFEIGQ 638
>gi|410730255|ref|XP_003671307.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
gi|401780125|emb|CCD26064.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
Length = 991
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 146/261 (55%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L +G +YIY LD ARK F+TG +LVVTDVAAR
Sbjct: 428 TILFVPTRHHVEYISQLLKDSGYLISYIYGTLDQHARKRQLYNFRTGLTSILVVTDVAAR 487
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VIN++ P +K+F+HRVGR ARAG G AYS+VS EL Y LDL LFLG+K
Sbjct: 488 GVDIPMLANVINFSLPASSKIFIHRVGRTARAGNRGWAYSIVSESELPYLLDLELFLGKK 547
Query: 122 PVLA-------------------DDS--MKGKIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
+L D+S + KI + D + G P+ +E N +
Sbjct: 548 IMLTPMYDSLCEIMKNKWIAEGNDESSFVNPKIAYTDRLILGSAPRLEVEGLGDLYKNMM 607
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLFRNIGSAEQEK 218
+ + +++ I+ A K Y ++R AS ES+K+ KE+ + + + LF + E+EK
Sbjct: 608 QNNFELKLIKDVAMKAEKLYFRTRTSASPESLKRSKEIIASGWDEQNVLFGK--NQEKEK 665
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 666 LDFLAKLQNRRNKETVFEFSR 686
>gi|160380606|sp|A6ZXU0.1|DBP10_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|151941964|gb|EDN60320.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|190405046|gb|EDV08313.1| hypothetical protein SCRG_00534 [Saccharomyces cerevisiae RM11-1a]
gi|256269702|gb|EEU04973.1| Dbp10p [Saccharomyces cerevisiae JAY291]
Length = 995
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 140/261 (53%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 435 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG K
Sbjct: 495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGEK 554
Query: 122 PVLAD------DSMK------GKIRHQ----------DGMFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 555 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 614
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIG-SAEQEK 218
+ D++ +KT A K Y ++R AS ES+K+ KE+ + F G + E+EK
Sbjct: 615 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAF--FGKNEEKEK 672
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 673 LDFLAKLQNRRNKETVFEFTR 693
>gi|403170885|ref|XP_003330153.2| hypothetical protein PGTG_11063 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168932|gb|EFP85734.2| hypothetical protein PGTG_11063 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1018
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 143/270 (52%), Gaps = 32/270 (11%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VFTATK+HVEY+ +L AG + IY LD TAR+ F+ G+ +LVVTD+AA
Sbjct: 391 QTIVFTATKHHVEYLGGLLVAAGYRVSLIYGALDQTARREQLDSFRLGQTNILVVTDLAA 450
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ VINY+FP A+ FVHRVGR ARAGR G AYSL++ EL + +DL LFL R
Sbjct: 451 RGIDIPILENVINYDFPSSARAFVHRVGRTARAGRKGWAYSLITQSELPFLMDLQLFLSR 510
Query: 121 K----PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIM-NWVELDADMEGIQKTCNNA 175
P+ A++ + G IP+ L++ + + V ++ + + A
Sbjct: 511 PLLACPLPANEDPSQTDFSSSLVIGTIPRELLDAETEYVRETLVSPNSALIALATVVKRA 570
Query: 176 YKKYVKSRPGASVESVKKVKELEL----------ATMQVHPLF-----------RNIGSA 214
K Y KS+ AS ES ++ KE L +H +F R +
Sbjct: 571 QKMYEKSQSTASNESHRRAKEFVLNGKGFSGAKNEEASIHLIFKDRKQELPSTQRGVKRT 630
Query: 215 EQE------KFNLLTKMSEYRPPSTVLEFG 238
+++ + LL K++++ P TV E G
Sbjct: 631 KKDDQTVKLRDQLLAKVNQFTPNETVFEIG 660
>gi|157875861|ref|XP_001686302.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|68129376|emb|CAJ07917.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 803
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 148/246 (60%), Gaps = 15/246 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F+ +K+HVE++ IL IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 273 ALIFSESKFHVEFLQMILTHYSISTSAVHGQMDQEARRLAVRSFAKRETSVMVVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DL+ F+GR
Sbjct: 333 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYVDLMQFIGRP 392
Query: 122 PVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L + G + DG +G++P+ ++ ++ + E D ++ + + NA+KK+
Sbjct: 393 --LQSAPVPGDLLFTPDDGCYGRLPEEDIQLELDFLKRLHENDVEVRNMARVVENAHKKF 450
Query: 180 VKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRPPS 232
+++ + E++++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 451 NRTKKKPTHEAIQEARKPQYAFDRTPLHPMLLERLGSTRVRADEVRFDL----KRFKPKE 506
Query: 233 TVLEFG 238
LE G
Sbjct: 507 LFLEIG 512
>gi|146099084|ref|XP_001468551.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134072919|emb|CAM71636.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 803
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 147/246 (59%), Gaps = 15/246 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVE++ IL IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 273 ALIFVESKFHVEFLQMILTHYSISTSAVHGQMDQEARRLAVRSFAKRETSVMVVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DLL F+GR
Sbjct: 333 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYIDLLQFIGRP 392
Query: 122 PVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L + G + +G +G++P+ ++ ++ + E D ++ + + NA+KK+
Sbjct: 393 --LQSAPVPGDLLFTPDNGCYGRLPEEDIQLELDFLKRLHENDVEVRSMARVVENAHKKF 450
Query: 180 VKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRPPS 232
+++ + E++++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 451 NRTKKKPTHEAIQEARKPQYAFDRTPLHPMLLERVGSTRVRADEARFDL----KRFKPKE 506
Query: 233 TVLEFG 238
LE G
Sbjct: 507 LFLEIG 512
>gi|398022356|ref|XP_003864340.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322502575|emb|CBZ37658.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 803
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 147/246 (59%), Gaps = 15/246 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVE++ IL IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 273 ALIFVESKFHVEFLQMILTHYSISTSAVHGQMDQEARRLAVRSFAKRETSVMVVTDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DLL F+GR
Sbjct: 333 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYIDLLQFIGRP 392
Query: 122 PVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L + G + +G +G++P+ ++ ++ + E D ++ + + NA+KK+
Sbjct: 393 --LQSAPVPGDLLFTPDNGCYGRLPEEDIQLELDFLKRLHENDVEVRSMARVVENAHKKF 450
Query: 180 VKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRPPS 232
+++ + E++++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 451 NRTKKKPTHEAIQEARKPQYAFDRTPLHPMLLERVGSTRVRADEARFDL----KRFKPKE 506
Query: 233 TVLEFG 238
LE G
Sbjct: 507 LFLEIG 512
>gi|255712653|ref|XP_002552609.1| KLTH0C08866p [Lachancea thermotolerans]
gi|238933988|emb|CAR22171.1| KLTH0C08866p [Lachancea thermotolerans CBS 6340]
Length = 972
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 141/260 (54%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T++HVEY+ ++L G +Y+Y LD AR+ F+ G +LVVTDVAAR
Sbjct: 419 TIVFVPTRHHVEYISQLLKDCGYLVSYLYGTLDQHARRQQLFNFRAGLTTILVVTDVAAR 478
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L V+NY+ P +K+FVHRVGR ARAG G AYS+VS +EL Y LDL LFLG+K
Sbjct: 479 GVDIPLLANVVNYSLPASSKIFVHRVGRTARAGNKGFAYSIVSENELPYLLDLELFLGKK 538
Query: 122 PVL------ADDSMKG---------------KIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
+L + +K K+ + + M G P+ +E N
Sbjct: 539 ILLTPMFEATTELLKSKWIAEGNSELTFNPPKVSYTNRMVLGACPRLDLETCGDLFKNLT 598
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
+ D++ ++ A K Y ++RP AS +S+K+ KE+ +A+ R + E+EK
Sbjct: 599 QSSFDLQQLKGVAAKAEKLYFRTRPPASSQSMKRSKEV-IASGWDEQNLRFGKNIEKEKL 657
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
+ L K+ TV EF +
Sbjct: 658 DFLAKLQNRNNKETVFEFAR 677
>gi|399217305|emb|CCF73992.1| unnamed protein product [Babesia microti strain RI]
Length = 903
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 137/239 (57%), Gaps = 15/239 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT++HVE+ + L+ + ++Y+Y +D + R A F K L+VTDVAAR
Sbjct: 328 TIVFVATRHHVEFFKLLFDLSHLKASYVYGSMDMSLRMQQMANFSNSKTNFLIVTDVAAR 387
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP ++ VIN++FP KLF+HR GR ARAGR+GVA SLV+ EL + +L LFLG+K
Sbjct: 388 GLDIPIVNNVINFDFPYSPKLFIHRAGRTARAGRTGVAVSLVTLQELSFTTELELFLGKK 447
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+A +K + G I G +++++ + + + + +++ ++++ N A Y K
Sbjct: 448 IEIARKELKS------CLLGSI--GRLDNEMEYVESVIACNVELQHLRRSMNAALNLYYK 499
Query: 182 SRPGASVESVKKVKE-------LELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPST 233
+RP S SV K+ L + HP + ++ A+ + L ++++RP T
Sbjct: 500 TRPMPSRNSVINAKKLIASCGGLPILNRSTHPYWCDLTDADSDNVEFLKALNKFRPEKT 558
>gi|146415030|ref|XP_001483485.1| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 135/251 (53%), Gaps = 17/251 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV +L AG YIY LD ARK +F+ +LVVTDVAAR
Sbjct: 391 TIVFVPTKHHVEYVTTLLRDAGHLVLYIYGTLDQHARKQQLYQFRAAYTNILVVTDVAAR 450
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+NY P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 451 GIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 510
Query: 122 PVLAD-DSMKGKIRHQDGM------------FGKIPQGLMEDQISEIMNWVELDADMEGI 168
+L K +I H+ G+ G P+ +E N + ++ I
Sbjct: 511 VLLTQMHEKKVQICHEKGLSAPEVSYKDRLVLGLAPRVDIESSQELCDNLLRNHYELRTI 570
Query: 169 QKTCNNAYKKYVKSRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAEQEKFNLLTKMS 226
+ N Y ++R AS ESVK+ KE+ A H LF E+EKF L K++
Sbjct: 571 RDVANKGEILYYRTRQPASQESVKRAKEIMDTGAWDDQHLLFGANLEKEKEKF--LAKLA 628
Query: 227 EYRPPSTVLEF 237
+ + TV EF
Sbjct: 629 DRKVKETVFEF 639
>gi|395333010|gb|EJF65388.1| ATP-dependent RNA helicase DBP10 [Dichomitus squalens LYAD-421 SS1]
Length = 962
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 143/254 (56%), Gaps = 17/254 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L AG + ++IY LD AR F+ G+ +LVVTDVAA
Sbjct: 396 QTLIFAATKHHVEYLTNLLAAAGYAVSHIYGSLDQVARTQQMDAFRRGRTNILVVTDVAA 455
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S V++ EL Y LDL LFL R
Sbjct: 456 RGIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRQGWAWSFVTASELPYLLDLQLFLSR 515
Query: 121 KPVLADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
P+ + S G + + + G + ++++++ I + + ++ ++ Y
Sbjct: 516 -PIKNEVSGAGDQAYTESLVLGPFERDKLDEEVAYIQKLDQENHNLSTLRDVMRKGQGMY 574
Query: 180 VKSRPGASVESVKKVKEL-------ELATMQ-VHP--LFRNIGSA-----EQEKFNLLTK 224
+S+ AS S KE+ + T +HP L R+ +A E ++ LL
Sbjct: 575 ERSKGKASPASYHNTKEMLKDGRWGYIGTESGIHPVLLRRSPDTAAKLAEEAKRRALLKL 634
Query: 225 MSEYRPPSTVLEFG 238
+ +RP T+LE G
Sbjct: 635 VDSFRPAETILEIG 648
>gi|389744407|gb|EIM85590.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 910
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 143/271 (52%), Gaps = 34/271 (12%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HVEY+ +L AG S ++IY LD AR F+ G VLVVTDVAAR
Sbjct: 334 TLVFAATKHHVEYLTNLLITAGYSVSHIYGSLDQAARTQQMDFFRRGVTNVLVVTDVAAR 393
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S VS EL Y LDL LFLGR
Sbjct: 394 GIDIPVLENVVNYDFPQGARVFVHRVGRTARAGRQGWAWSFVSPVELPYLLDLQLFLGRP 453
Query: 121 ---KPVLADDSMKGKIRHQDG-MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
+ +++ KG+ + + M G + M++++ I + E + + ++
Sbjct: 454 IKSEATASEEQGKGESLYTESLMLGTFTREKMDEEVEYIRSLDEANHSLPVLRDVMRKGQ 513
Query: 177 KKYVKSRPGASVESVKKVKEL-----------ELATMQVHPLFR--NIGSAE--QEKFN- 220
Y +S+ AS S K+ K++ A HP+ R IG+A QE
Sbjct: 514 GMYERSKGKASQASYKRAKDMMKKPGAWGLIGAGAEGGSHPVLRLKGIGAATGGQEDVKR 573
Query: 221 -------------LLTKMSEYRPPSTVLEFG 238
LL ++ +RP T LE G
Sbjct: 574 REEQREAEEKRRLLLRTVNSFRPAETALEIG 604
>gi|440295520|gb|ELP88433.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 672
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 134/235 (57%), Gaps = 18/235 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TV+F AT++ VEY+ +L ++S+ ++ D R+IN KF+ + +++ VTDVAAR
Sbjct: 256 TVIFCATRHEVEYLGALLKQYKVNSSILFGKADQQDREINLKKFRNDENKIMFVTDVAAR 315
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP+LD VINY+FP AKL++HR GR ARAGR G Y+ V ++E+ Y DL +F K
Sbjct: 316 GVDIPNLDNVINYDFPSSAKLYIHRCGRVARAGRIGTCYNFVQTEEMGYLKDLEVFAMDK 375
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V G +P+ ++ +S + ++ + D+ ++ N+ Y K
Sbjct: 376 EV---------------PIGNVPREYVDPVLSRLDQLLDANYDLNYLKIGATNSMSAYRK 420
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
S+P AS E V+K K++ +HP F N+ ++ + LT + YRP +++ +
Sbjct: 421 SKPSASSEGVRKSKDMNFDG--IHPSF-NMTGDDKNRMEWLTGIKNYRPKASIFQ 472
>gi|254578362|ref|XP_002495167.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
gi|238938057|emb|CAR26234.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
Length = 979
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 142/261 (54%), Gaps = 25/261 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T++HVEY+ ++L G +YIY LD AR+ F+ G +LVVTDVAAR
Sbjct: 423 TIVFVPTRHHVEYISQLLKACGYLVSYIYGTLDQHARRRQLYNFRAGLTSILVVTDVAAR 482
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VIN+ P +K+FVHRVGR ARAG G AYS+VS EL Y LDL LFLG+K
Sbjct: 483 GVDIPMLANVINFTMPSSSKIFVHRVGRTARAGNRGWAYSIVSESELPYLLDLELFLGKK 542
Query: 122 PVLA------------------DDSMK---GKIRHQDGM-FGKIPQGLMEDQISEIMNWV 159
+LA +D + K+ + D M G P+ +E N +
Sbjct: 543 ILLAPMYEATCNLLKEKWVNEGNDEFRFQPPKVSYTDRMVLGSCPRIELESMGDLYKNLM 602
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLFRNIGSAEQEK 218
+ + D+ + A Y+++R AS ES+K+ K++ ++ + + LF AE+ K
Sbjct: 603 DSNYDLGSTRGVSIKAEIMYMRTRQPASAESMKRAKQMIISGWDEQNILFGKNMEAEKNK 662
Query: 219 FNLLTKMSEYRPPSTVLEFGK 239
F L K+ + R TV EF +
Sbjct: 663 F--LAKLQDRRNKETVFEFAR 681
>gi|448102171|ref|XP_004199738.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359381160|emb|CCE81619.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 939
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 136/256 (53%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV +L +G +YIY LD AR F+ G +LVVTDVAAR
Sbjct: 402 TIIFVPTKHHVEYVSTLLKESGYLLSYIYGSLDQRARNQQLYNFKVGFTSILVVTDVAAR 461
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+FVHRVGR ARAG G AYS+V+ EL Y LDL LFLGRK
Sbjct: 462 GIDIPVLANVINFTLPASSKIFVHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGRK 521
Query: 122 PVLADDSMKG---------------KIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L K KI + D + G +P+ + +E ++
Sbjct: 522 VLLTSMHEKKCEILREKMGSSYVEPKISYSDRLVLGSVPRLELGSFQEFYEGLLEAHYEL 581
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
++ K Y ++R AS ES+K+ KE LE + H LF + E+EK N L
Sbjct: 582 RTVKGVAEKGEKLYHRTRQAASQESLKRSKEILETENWDEQHLLFG--PNLEKEKENFLN 639
Query: 224 KMSEYRPPSTVLEFGK 239
K++ + TV EF K
Sbjct: 640 KLANRKHKETVFEFHK 655
>gi|392570219|gb|EIW63392.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 956
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 141/254 (55%), Gaps = 17/254 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG + ++IY LD TAR F+ G+ +LVVTDVAA
Sbjct: 401 QTLVFAATKHHVEYLTNLLSTAGYAVSHIYGTLDQTARSEQMDNFRRGRTSILVVTDVAA 460
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++F+HRVGR ARAGR G A++ V + EL Y LDL LFLGR
Sbjct: 461 RGIDIPVLENVVNYDFPSGARVFIHRVGRTARAGRQGWAWNFVMAAELPYLLDLQLFLGR 520
Query: 121 KPVLADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
PV +D + + + + G + ++++ + + + ++ ++ + Y
Sbjct: 521 -PVKSDVTGTSDQAYTESLILGPFERDKVDEEAEYVRKLYDENHNLNMLRDVMRKGHGMY 579
Query: 180 VKSRPGASVESVKKVKELELATM--------QVHPLF--RNIGSA-----EQEKFNLLTK 224
+S+ AS S +K K + + HP+F RN +A + + LL
Sbjct: 580 ERSKGKASPVSYQKTKTMLKESRWGYAGTESTTHPVFFRRNPDAAVKLAEDARRRALLKV 639
Query: 225 MSEYRPPSTVLEFG 238
+ +RP T LE G
Sbjct: 640 VDSFRPVETTLEIG 653
>gi|255726598|ref|XP_002548225.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
gi|240134149|gb|EER33704.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
Length = 929
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV ++L AG +YIY LD ARK +F+ G +LVVTDVAAR
Sbjct: 409 TIIFVPTKHHVEYVTRLLRDAGYLVSYIYGTLDQHARKNQLYQFRVGLTNILVVTDVAAR 468
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 469 GIDIPVLANVINFTLPASSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 528
Query: 122 PVL-----ADDSMKGKIRHQDG------------MFGKIPQGLMEDQISEIMNWVELDAD 164
+L A M K + + + G IP+ +E N + D +
Sbjct: 529 ILLTSMHEAKVEMLKKSQGESSFIPPVVNYTERLVLGSIPRLDLETFQELYENLLRNDYE 588
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATMQVHPLFRNIGSAEQEKFNLLT 223
++ ++ + Y ++R AS ES+K+ KE LE + H LF + E++K + L
Sbjct: 589 IKVLKDVAIKGERLYHRTRASASQESLKRSKEILENSWDDQHLLFGE--NLEKQKLDFLN 646
Query: 224 KMSEYRPPSTVLEF 237
K+ TV EF
Sbjct: 647 KLQNRISKQTVFEF 660
>gi|50551521|ref|XP_503234.1| YALI0D24497p [Yarrowia lipolytica]
gi|74689555|sp|Q6C7X8.1|DBP10_YARLI RecName: Full=ATP-dependent RNA helicase DBP10
gi|49649102|emb|CAG81435.1| YALI0D24497p [Yarrowia lipolytica CLIB122]
Length = 926
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 10/248 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV +L G + +YIY LD ARK +F+TGK +LVVTDVAAR
Sbjct: 395 TIVFCPTKHHVEYVIVLLQTLGYAVSYIYGTLDQHARKNQLYRFRTGKTSILVVTDVAAR 454
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GID+P L VINY+ P K+F+HRVGR ARAG G AYS++ +++ Y LDL +FLGRK
Sbjct: 455 GIDVPVLANVINYSLPPSPKVFIHRVGRTARAGNRGWAYSIIKDNDIPYLLDLEVFLGRK 514
Query: 122 ---PVLADDSMKGKIRHQDGM----FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
P L D + G P+ +E E+ V+ +++ + +
Sbjct: 515 LLTPRLFKQQNPDPSAEPDYVNTLTIGAPPRQALEIHGEELAQMVKDSYELQQLSEVAVK 574
Query: 175 AYKKYVKSRPGASVESVKKVKE-LELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPST 233
+ Y K++ AS ES K+ K+ + L H +F G E K LL ++ + R T
Sbjct: 575 GERMYNKTKGSASQESAKRSKQIMALGWDDHHLMFGEDG--ESAKDALLARLGQKRIRET 632
Query: 234 VLEFGKAR 241
V EF K++
Sbjct: 633 VFEFRKSK 640
>gi|401626375|gb|EJS44323.1| dbp10p [Saccharomyces arboricola H-6]
Length = 1001
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 138/260 (53%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 441 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKNQLYNFRAGLTSILVVTDVAAR 500
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG+K
Sbjct: 501 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKK 560
Query: 122 PVLAD------DSMKGKIRHQDG----------------MFGKIPQGLMEDQISEIMNWV 159
+L D MK + + + G P+ +E N +
Sbjct: 561 ILLTPMYDSLVDLMKKRWVDEGKPEYTFQRPKLSYTKRIILGSCPRLDVEGLGDLYKNLM 620
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
+ D++ +KT A + Y ++R AS ES+K+ KE+ + F + E+EK
Sbjct: 621 TSNFDLQLAKKTAMKAEQLYYRTRTSASPESLKRSKEIIASGWDAQNAFFG-KNEEKEKL 679
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
+ L K+ R TV EF +
Sbjct: 680 DFLAKLQNRRNKETVFEFTR 699
>gi|156083018|ref|XP_001608993.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796243|gb|EDO05425.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 783
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 143/249 (57%), Gaps = 24/249 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF +TK+HVE+ +L GI+ + +Y +D TAR F++ K RVLVVTD+AAR
Sbjct: 271 TIVFVSTKHHVEFFRALLAATGITVSAVYGSMDMTARSHQMGLFKSLKTRVLVVTDLAAR 330
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P +D VINY+FP +KLF+HRVGR ARAGR G+A S+V+ + Y ++L +GRK
Sbjct: 331 GLDLPLVDCVINYDFPHSSKLFIHRVGRTARAGRQGLAISIVTMYDFAYAFEILTAIGRK 390
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V++ + + G G G I L+ + I I ++ D+D++ ++ + + +Y Y K
Sbjct: 391 MVISKEQIVGNEICAIGTVGDI--TLLVENIKSI---IQDDSDIKSLKMSMDASYNLYYK 445
Query: 182 SRPGASVESVKKVKELELATM--------QVHPLF----------RNIGSAEQEKFNLLT 223
+RP S ++ + ++L L +M VHP + + G+ E K +L
Sbjct: 446 TRPNPSKNAIDRAQQL-LKSMGGIIAISNAVHPSYGSEATIAEPDHSDGTEENSKSAILE 504
Query: 224 KMSEYRPPS 232
+ +RP S
Sbjct: 505 FLHGFRPSS 513
>gi|344301065|gb|EGW31377.1| ATP-dependent RNA helicase DBP10 [Spathaspora passalidarum NRRL
Y-27907]
Length = 918
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV ++L AG +YIY LD ARK +F+ G ++VVTDVAAR
Sbjct: 395 TIVFVPTKHHVEYVTRMLRDAGYLVSYIYGTLDQHARKNQLYQFRIGLTHIMVVTDVAAR 454
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 455 GIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 514
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L D + K+ + + + G IP+ +E N + D ++
Sbjct: 515 ILLTSMHETKCEVLKRKQGDAYVPPKVNYTERLVLGSIPRLDLEGCQELYENLLRNDYEL 574
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
+ ++ K Y ++R AS ES+K+ KE +E + + H LF + E++K + L
Sbjct: 575 KVLRDVAAKGEKLYHRTRQAASPESLKRSKEIMETGSWDEQHVLFG--PNLEKQKQDFLA 632
Query: 224 KMSEYRPPSTVLEFGK 239
K+ TV EF K
Sbjct: 633 KLQNRNVKETVFEFNK 648
>gi|409080625|gb|EKM80985.1| hypothetical protein AGABI1DRAFT_127033 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 926
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 144/260 (55%), Gaps = 30/260 (11%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++FTATK+HVEY+ +L G S ++IY LD +AR +F+ G +LVVTDVAA
Sbjct: 394 QTLIFTATKHHVEYLSTLLTTIGYSVSHIYGSLDQSARTYQMDQFRRGVTNILVVTDVAA 453
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP ++FVHRVGR ARAGR G A+S ++ EL Y LDL LFL R
Sbjct: 454 RGIDIPVLENVVNYDFPHGGRVFVHRVGRTARAGRQGWAWSFITHTELPYLLDLQLFLAR 513
Query: 121 KPVLADDSMKGKIRHQDG--------MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTC 172
P+ + + H+ G + G + +++ + + + + + + +++
Sbjct: 514 -PLTS-------VVHESGDRPYTESLVLGTFEREKIDEDVEYLKSLDDANHSLPTLREVM 565
Query: 173 NNAYKKYVKSRPGASVESVKKVKEL------ELATMQ--VHP-LFRNIGSAEQEKFN--- 220
+ Y +S+ AS +S K+ KE+ +LA +HP L R +AE+ K
Sbjct: 566 KRGHVMYERSKGKASPQSYKRAKEMSKDPKWQLAGSDSGIHPVLLRGGDAAEKRKLQDAR 625
Query: 221 --LLTKMSEYRPPSTVLEFG 238
LL ++ + P TV E G
Sbjct: 626 KTLLKAVNAFTPLETVFEVG 645
>gi|242133498|gb|ACS87799.1| putative ATP-dependent RNA helicase [Crithidia sp. ATCC 30255]
Length = 885
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 142/244 (58%), Gaps = 11/244 (4%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVE++ +L IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 341 ALIFVESKFHVEFLQMVLTAYDISASGVHGQMDQEARRLAVRSFAKRETSVMVVTDVAAR 400
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DL+ F+GR
Sbjct: 401 GLDLPLLDNVVNFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYVDLMQFIGRP 460
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A DG +G++P+ ++ ++ + D ++ + K NA+KK+ +
Sbjct: 461 LQSAPTPGDLLFTPDDGCYGRLPEEDIQLELDFLKRLHANDVEVRNMAKVVENAHKKFNR 520
Query: 182 SRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRPPSTV 234
++ + E +++ ++ + A +HP L +GS A++ +F+L ++P
Sbjct: 521 TKKKPTHEGIQEARKPQYAFDKTPLHPLLLERLGSTRVRADEARFDL----KRFKPKELF 576
Query: 235 LEFG 238
LE G
Sbjct: 577 LEMG 580
>gi|254566739|ref|XP_002490480.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238030276|emb|CAY68199.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328350871|emb|CCA37271.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 1003
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 143/265 (53%), Gaps = 33/265 (12%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVE++ +L G + Y Y LD AR+ F+ G VLVVTDVAAR
Sbjct: 418 TIVFVPTKHHVEFITTLLKKIGYAVAYTYGSLDQHARRQQLLNFRAGIATVLVVTDVAAR 477
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN++ P +K+FVHRVGR ARAG G AYS+V EL Y LDL LFLGRK
Sbjct: 478 GIDIPVLANVINFSLPASSKIFVHRVGRTARAGHRGWAYSIVQDRELPYLLDLELFLGRK 537
Query: 122 PVLADDSMKGKI--------RHQDG----------------MFGKIPQGLMEDQISEIMN 157
VL + GK+ + +G + G P+ +E + E+ N
Sbjct: 538 -VLLTEMQNGKVHLLQERYKKEHNGSLEGFEPPAVSFTQRLVLGSCPRNPLEGYL-EMFN 595
Query: 158 WVELDA-DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM--QVHPLFRNIGSA 214
+ D+ D++ A K Y ++R AS +SV++ KEL+ + + + LF G+
Sbjct: 596 TIMKDSYDLQLQSGVATKAEKLYFRTRGAASSDSVRRTKELKASGKWDEQNILF---GAN 652
Query: 215 EQ-EKFNLLTKMSEYRPPSTVLEFG 238
E+ EK L K+ + + TV EFG
Sbjct: 653 EEYEKELFLAKLRDRKDRETVFEFG 677
>gi|50312293|ref|XP_456179.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74689956|sp|Q6CIR0.1|DBP10_KLULA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49645315|emb|CAG98887.1| KLLA0F24684p [Kluyveromyces lactis]
Length = 973
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 139/258 (53%), Gaps = 21/258 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T++HVEYV ++L G +YIY L+ ARK F+ G +LVVTDVAAR
Sbjct: 421 TIVFVPTRHHVEYVTQLLKNCGYLVSYIYGALNQHARKQQLYNFRAGLTSILVVTDVAAR 480
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY+ P +K+F+HRVGR ARAG G A+S+VS +EL Y LDL LFLG+K
Sbjct: 481 GVDIPLLANVINYSLPGSSKIFIHRVGRTARAGNRGWAFSIVSENELPYLLDLELFLGKK 540
Query: 122 PVLA-------------------DDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVEL 161
+L ++ K+ + M G P+ ++ N ++
Sbjct: 541 ILLTPMYESSCQILRKKAESEGNNNFTDPKVSYTTRMVLGACPRSEIDGMGDLYSNMIKS 600
Query: 162 DADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNL 221
D ++ ++ A K Y ++R AS ES+K+ KE+ + ++ +AE+EK +
Sbjct: 601 DFELNTVKGVALKAEKLYFRTRTPASAESMKRSKEILRSGWDEQNIYFG-KNAEKEKLDF 659
Query: 222 LTKMSEYRPPSTVLEFGK 239
L K+ TV EF +
Sbjct: 660 LAKLQHRNNKETVFEFAR 677
>gi|403338502|gb|EJY68492.1| hypothetical protein OXYTRI_10894 [Oxytricha trifallax]
Length = 947
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++F AT+YHVE++H+++ AG S +IY +D +R+ F+ K+ L+VTD+AAR
Sbjct: 282 SIIFGATRYHVEFLHELVTRAGFKSVFIYGAMDQRSREERLNIFRAKKVNFLIVTDLAAR 341
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR- 120
GIDIP L VI+Y+FP K KLF+HR GR ARAG+ G +YS+++ EL Y DL +F+GR
Sbjct: 342 GIDIPFLSNVIHYDFPTKMKLFIHRSGRTARAGQKGTSYSIITKKELPYMHDLSIFVGRK 401
Query: 121 ---KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQKTCNNAY 176
KP + + + FG++PQ +++ + N + + ++ +QK+ +
Sbjct: 402 YFDKPSENLEMNELLLNPMHICFGRLPQHTVDEYMELYANLLHSHETALQPLQKSMELSL 461
Query: 177 KKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF-NLLTKMSEYRPPSTVL 235
KY K+R AS+ V +L+ + +HPL R +Q F ++ ++P +VL
Sbjct: 462 NKYNKTRDPASMSGVYAASKLQESD--IHPLLRLTVDQKQVDFMKFKDQLKSFKPKQSVL 519
Query: 236 E 236
E
Sbjct: 520 E 520
>gi|393245270|gb|EJD52781.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 927
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 136/250 (54%), Gaps = 13/250 (5%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF ATK+HVEY+ +L AG + ++IY LD AR +F+ G VLVVTDVAA
Sbjct: 384 QTIVFVATKHHVEYISNLLTTAGYAVSHIYGALDQAARGQQMDRFRKGITSVLVVTDVAA 443
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP +++FVHRVGR ARAGR G A+S V++ EL Y LDL LFL R
Sbjct: 444 RGIDIPVLENVVNYDFPSGSRVFVHRVGRTARAGRKGWAWSFVTNPELPYLLDLQLFLAR 503
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P+L + ++ + G + ++ ++ + E + + ++ + Y
Sbjct: 504 -PLLPVAGPGEQAYVENLVLGPFAREDIDQEVEFVRTLDETNTALPTLRDVMAKGQRMYE 562
Query: 181 KSRPGASVESVKKVKELE-----------LATMQVHPLFRNIGSAEQ-EKFNLLTKMSEY 228
+S+ AS S K+ KE+ + HP+ + + +K LL + +
Sbjct: 563 RSQGKASQASYKRAKEMSKDPTWPLAGSTAEQSRAHPILAASRTDDDVKKAALLAAVGSF 622
Query: 229 RPPSTVLEFG 238
+P TV E G
Sbjct: 623 KPAETVFELG 632
>gi|426197540|gb|EKV47467.1| hypothetical protein AGABI2DRAFT_118043 [Agaricus bisporus var.
bisporus H97]
Length = 926
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 144/260 (55%), Gaps = 30/260 (11%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++FTATK+HVEY+ +L G S ++IY LD +AR +F+ G +LVVTDVAA
Sbjct: 394 QTLIFTATKHHVEYLSTLLTTIGYSVSHIYGSLDQSARTYQMDQFRRGVTSILVVTDVAA 453
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP ++FVHRVGR ARAGR G A+S ++ EL Y LDL LFL R
Sbjct: 454 RGIDIPVLENVVNYDFPHGGRVFVHRVGRTARAGRQGWAWSFITHTELPYLLDLQLFLAR 513
Query: 121 KPVLADDSMKGKIRHQDG--------MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTC 172
P+ + + H+ G + G + +++ + + + + + + +++
Sbjct: 514 -PLTS-------VVHESGDRPYTESLVLGTFEREKIDEDVEYLKSLDDTNHSLPTLREVM 565
Query: 173 NNAYKKYVKSRPGASVESVKKVKEL------ELATMQ--VHP-LFRNIGSAEQEKFN--- 220
+ Y +S+ AS +S K+ KE+ +LA +HP L R +AE+ K
Sbjct: 566 KRGHVMYERSKGKASPQSYKRAKEMSKDPKWQLAGSDSGIHPVLLRGGDAAEKRKSQDAR 625
Query: 221 --LLTKMSEYRPPSTVLEFG 238
LL ++ + P TV E G
Sbjct: 626 KTLLKAVNAFTPLETVFEVG 645
>gi|367013516|ref|XP_003681258.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
gi|359748918|emb|CCE92047.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
Length = 968
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 143/265 (53%), Gaps = 34/265 (12%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ +L G +YIY LD AR F+ G +LVVTDVAAR
Sbjct: 411 TILFVPTRHHVEYIANLLKNCGYLVSYIYGSLDQRARNRQLYNFRAGLTSILVVTDVAAR 470
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VIN++FP +K+FVHRVGR ARAG G AYS++S EL Y LDL LFLG+K
Sbjct: 471 GVDIPMLANVINFSFPSSSKIFVHRVGRTARAGNRGWAYSIISESELPYLLDLELFLGKK 530
Query: 122 ----PV--LADDSMKGKIRHQDG----------------MFGKIPQ---GLMEDQISEIM 156
P+ A D ++ + + + G P+ M D +M
Sbjct: 531 ILTTPMYEAATDLLEKRWVEEGKEKILFKAPKPSYTNRLVLGSCPRLDIDSMGDLYKNLM 590
Query: 157 NWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF--RNIGSA 214
+ EL+ + G+ K A K Y+++R ASVESVK+ +EL + + +N+
Sbjct: 591 SSFELET-LRGVAK---KAEKLYLRTRTAASVESVKRSRELMTSGWDEQNVMFGKNL--- 643
Query: 215 EQEKFNLLTKMSEYRPPSTVLEFGK 239
E+EK + L K+ + TV EF +
Sbjct: 644 EKEKLDFLAKLQDRTNKETVFEFAR 668
>gi|374107994|gb|AEY96901.1| FAEL086Wp [Ashbya gossypii FDAG1]
Length = 960
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +T++HVEYV +L G +Y+Y LD AR+ F+ G +LVVTDVAAR
Sbjct: 413 TIIFVSTRHHVEYVSNLLKDCGYLVSYLYGTLDQHARRQQLHNFRCGLTNILVVTDVAAR 472
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L V+N + P +K+FVHRVGR ARAG G AY+++S EL Y LDL LFLG+K
Sbjct: 473 GVDIPLLANVVNMSLPASSKIFVHRVGRTARAGNKGWAYTILSESELPYLLDLELFLGKK 532
Query: 122 PVLAD------DSMKGKIRHQDG----------------MFGKIPQGLMEDQISEIMNWV 159
+L D +K K + + G P+ +E N V
Sbjct: 533 VLLTPMYEATCDLLKKKWISEGNEGALFQPPKISYVNRLILGSAPRLDLEAMGDLFKNLV 592
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
E + +++ ++ A K Y+++R AS ES+K+ KE+ +A R + E+EK
Sbjct: 593 ESNFELQNLKAVSIKAEKLYLRTRQPASAESIKRAKEV-IAAGWDEQNVRFGKNIEKEKL 651
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
L K+ TV EF +
Sbjct: 652 EFLAKLQNRHNKETVFEFAR 671
>gi|45190521|ref|NP_984775.1| AEL086Wp [Ashbya gossypii ATCC 10895]
gi|74693722|sp|Q757U8.1|DBP10_ASHGO RecName: Full=ATP-dependent RNA helicase DBP10
gi|44983463|gb|AAS52599.1| AEL086Wp [Ashbya gossypii ATCC 10895]
Length = 960
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 23/260 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +T++HVEYV +L G +Y+Y LD AR+ F+ G +LVVTDVAAR
Sbjct: 413 TIIFVSTRHHVEYVSNLLKDCGYLVSYLYGTLDQHARRQQLHNFRCGLTNILVVTDVAAR 472
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L V+N + P +K+FVHRVGR ARAG G AY+++S EL Y LDL LFLG+K
Sbjct: 473 GVDIPLLANVVNMSLPASSKIFVHRVGRTARAGNKGWAYTILSESELPYLLDLELFLGKK 532
Query: 122 PVLAD------DSMKGKIRHQDG----------------MFGKIPQGLMEDQISEIMNWV 159
+L D +K K + + G P+ +E N V
Sbjct: 533 VLLTPMYEATCDLLKKKWISEGNEGALFQPPKISYVNRLILGSAPRLDLEAMGDLFKNLV 592
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKF 219
E + +++ ++ A K Y+++R AS ES+K+ KE+ +A R + E+EK
Sbjct: 593 ESNFELQNLKAVSIKAEKLYLRTRQPASAESIKRAKEV-IAAGWDEQNVRFGKNIEKEKL 651
Query: 220 NLLTKMSEYRPPSTVLEFGK 239
L K+ TV EF +
Sbjct: 652 EFLAKLQNRHNKETVFEFAR 671
>gi|448098288|ref|XP_004198888.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359380310|emb|CCE82551.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 135/256 (52%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV +L +G +YIY LD AR F+ G +LVVTDVAAR
Sbjct: 422 TIIFVPTKHHVEYVSTLLKESGYLLSYIYGSLDQRARNQQLYNFKVGFTSILVVTDVAAR 481
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+FVHRVGR AR G G AYS+V+ EL Y LDL LFLGRK
Sbjct: 482 GIDIPVLANVINFTLPASSKIFVHRVGRTARVGNKGWAYSIVNEKELPYLLDLELFLGRK 541
Query: 122 PVLADDSMKG---------------KIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L K K+ + D + G IP+ + +E ++
Sbjct: 542 VLLTSMHEKKCEILKAKMGSSYVEPKVSYSDRLVLGSIPRLELGSFQEFYEGLLEAHYEL 601
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
++ K Y ++R AS ES+K+ KE +E + H LF + E+EK N L
Sbjct: 602 RTVKGVAEKGEKLYHRTRQAASQESLKRSKEIIETENWDEQHLLFG--PNLEKEKENFLN 659
Query: 224 KMSEYRPPSTVLEFGK 239
K++ + TV EF K
Sbjct: 660 KLANRKHKETVFEFHK 675
>gi|68465679|ref|XP_723201.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|68465972|ref|XP_723054.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|74680391|sp|Q5ANB2.1|DBP10_CANAL RecName: Full=ATP-dependent RNA helicase DBP10
gi|46445068|gb|EAL04339.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|46445224|gb|EAL04494.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|238880918|gb|EEQ44556.1| hypothetical protein CAWG_02828 [Candida albicans WO-1]
Length = 908
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 138/254 (54%), Gaps = 21/254 (8%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV K+L AG +YIY LD ARK +F+ G VLVVTDVAAR
Sbjct: 397 TIVFVPTKHHVEYVTKLLRDAGYLVSYIYGTLDQHARKNQLYQFRVGLTNVLVVTDVAAR 456
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 457 GIDIPVLANVINFTLPASSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 516
Query: 122 PVLADDSMKGKI----RHQDGMF-------------GKIPQGLMEDQISEIMNWVELDAD 164
+L + K+ + G F G +P+ +E N + + +
Sbjct: 517 -ILLTSMHEAKVEMLKKSSTGTFIPPVVNYTERLVLGSVPRVDLETFQELYENLLRNNYE 575
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATMQVHPLFRNIGSAEQEKFNLLT 223
++ ++ K Y ++R AS ES+K+ KE +E + H LF + E++K L
Sbjct: 576 IKVLKDVAAKGEKLYHRTRQPASQESLKRSKEIIESSWDDQHLLFGE--NLEKQKDAFLA 633
Query: 224 KMSEYRPPSTVLEF 237
K+ + TV E
Sbjct: 634 KLQDRNSKQTVFEL 647
>gi|406695006|gb|EKC98321.1| hypothetical protein A1Q2_07335 [Trichosporon asahii var. asahii
CBS 8904]
Length = 690
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 142/245 (57%), Gaps = 22/245 (8%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +TK+HVEY+ +L AG +YIY LD AR+ +F+ + +LVVTDVAARG
Sbjct: 267 IIFASTKHHVEYLSVLLQAAGYRVSYIYGSLDQVARQQQLKRFRAAETDLLVVTDVAARG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDIPS+ VINY+FP ++FVHRVGR ARAG+ G A++LV+ D+L Y DL +FL R
Sbjct: 327 IDIPSIPHVINYDFPTGVRVFVHRVGRTARAGQHGHAWTLVTRDDLPYMRDLEIFLER-- 384
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQKTCNNAYKKYVK 181
D +K K +G +P+ +E + + +++ ++ + +++ + +
Sbjct: 385 ----DFLKDK-----ESYGNLPRDSLETMLEYVQQTLDIEESQLPSLREVMRRGQTMFER 435
Query: 182 SRPGASVESVKKVKELELA--TMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPPST 233
SR A+ ++ K VKE+ + VHP+F ++ +A ++K LL + Y+P T
Sbjct: 436 SRAKANKDAYKYVKEISASGGPSLVHPVFSSNEAPSDLQAAGRDK--LLASIEAYQPHET 493
Query: 234 VLEFG 238
+ E G
Sbjct: 494 IFEIG 498
>gi|354548000|emb|CCE44735.1| hypothetical protein CPAR2_405390 [Candida parapsilosis]
Length = 914
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEY+ K+L AG +YIY LD ARK +F+ G ++LVVTDVAAR
Sbjct: 389 TIVFVPTKHHVEYITKLLRDAGYLVSYIYGTLDQHARKNQLYQFKIGLTKILVVTDVAAR 448
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L V+N+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 449 GIDIPVLANVVNFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 508
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L D + ++ + + + G IP+ +E N ++ + ++
Sbjct: 509 VLLTSMHEAKCEMLQKTQGDSYIPPRVNYTERLVVGSIPRVDLETFQELYENLLKNNYEI 568
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
+ ++ K Y ++R AS ES+K+ KE LE + H LF + E++K + L
Sbjct: 569 KVLKDVATKGEKLYHRTRQAASQESLKRSKEILETNSWDDQHLLFGE--NLEKKKEDFLA 626
Query: 224 KMSEYRPPSTVLEFGK 239
K+ TV E K
Sbjct: 627 KLQNRNVKETVFEIKK 642
>gi|344232323|gb|EGV64202.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 910
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 142/258 (55%), Gaps = 24/258 (9%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEY+ +L G +YIY LD TARK +F+ G ++VVTDVAAR
Sbjct: 385 TMVFVPTKHHVEYITSLLRSCGYLVSYIYGTLDQTARKQQLYQFRIGLTTIMVVTDVAAR 444
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL +FLG+K
Sbjct: 445 GIDIPILANVINFTLPSSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLEIFLGKK 504
Query: 122 PVLADDSMKGKI---------RHQDG--------MFGKIPQGLMEDQISEIMNWVELDAD 164
+L + K+ R+Q+ + G P+ +E+ ++ + D
Sbjct: 505 -ILTTSLHESKVKLLKERMGDRYQEPKLSFTERLVLGSAPRAELENCQEVYEGVLKHNYD 563
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVK---ELELATMQVHPLFRNIGSAEQEKFNL 221
++ I+ K + ++R AS ESVK+ K E +L Q H LF + E+EK +
Sbjct: 564 LKLIKDVSIKGEKLFYRTRQPASNESVKRSKNMVEHQLWDEQ-HLLFG--PNVEKEKQDF 620
Query: 222 LTKMSEYRPPSTVLEFGK 239
L K++ TV EF K
Sbjct: 621 LDKLANRHSKETVFEFNK 638
>gi|241953401|ref|XP_002419422.1| ATP-dependent RNA helicase, putative; ribosome biogenesis protein,
putative [Candida dubliniensis CD36]
gi|223642762|emb|CAX43016.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 933
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 141/254 (55%), Gaps = 20/254 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV K+L AG +YIY LD ARK +F+ G +LVVTDVAAR
Sbjct: 412 TIIFVPTKHHVEYVTKLLRDAGYLVSYIYGTLDQHARKNQLYQFRIGLTNILVVTDVAAR 471
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+++ EL Y LDL LFLG+K
Sbjct: 472 GIDIPVLANVINFTLPASSKIFIHRVGRTARAGNKGWAYSIINEKELPYLLDLELFLGKK 531
Query: 122 -----------PVLADDSMKGK-----IRHQDGM-FGKIPQGLMEDQISEIMNWVELDAD 164
+L S+KGK + + + + G IP+ +E N + + +
Sbjct: 532 ILLTSMHEAKLEMLKKTSIKGKFIPPIVNYTERLVLGSIPRIDLEIFQELYENLLRNNYE 591
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATMQVHPLFRNIGSAEQEKFNLLT 223
++ ++ K Y ++R AS ES+K+ KE ++ + H LF + E++K L
Sbjct: 592 IKVLKDVAIKGEKLYHRTRQPASQESLKRSKEIIDNSWDDQHLLFGE--NLEKQKHEFLI 649
Query: 224 KMSEYRPPSTVLEF 237
K+ + TV E
Sbjct: 650 KLQDRNFKQTVFEL 663
>gi|448522708|ref|XP_003868758.1| Dbp10 protein [Candida orthopsilosis Co 90-125]
gi|380353098|emb|CCG25854.1| Dbp10 protein [Candida orthopsilosis]
Length = 912
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEY+ K+L AG +YIY LD ARK +F+ G ++LVVTDVAAR
Sbjct: 387 TIIFVPTKHHVEYITKLLRDAGYLVSYIYGTLDQHARKNQLYQFKIGLTKILVVTDVAAR 446
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ EL Y LDL LFLG+K
Sbjct: 447 GIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 506
Query: 122 PVL---------------ADDSMKGKIRHQDGM-FGKIPQGLMEDQISEIMNWVELDADM 165
+L D + ++ + + + G IP+ +E N ++ + ++
Sbjct: 507 VLLTSMYEAKCEMLKNKQGDSYIPPRVNYTERLVVGSIPRVDLETFQELYENLLKNNYEI 566
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
+ ++ K Y ++R AS ES+K+ KE LE + H LF + E++K + L
Sbjct: 567 KVLKDVATKGEKLYHRTRQAASQESLKRSKEILETNSWDDQHLLFGE--NLEKKKEDFLA 624
Query: 224 KMSEYRPPSTVLEFGK 239
K+ TV E K
Sbjct: 625 KLQNRNVKETVFEIRK 640
>gi|397640887|gb|EJK74372.1| hypothetical protein THAOC_03953 [Thalassiosira oceanica]
Length = 1035
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 156/328 (47%), Gaps = 92/328 (28%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F AT++HVEY+ +L G+ +T IY ++D AR+ N FQ G +LVVTDVAA
Sbjct: 315 LTLIFAATRHHVEYLTLLLNTTGLKTTQIYGNMDNEARQKNLRSFQNGTCPILVVTDVAA 374
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P +D VI+Y FP AKLF+HR GR ARAGR G + +V +E+ Y +DL +FLGR
Sbjct: 375 RGIDVPLIDHVIHYAFPPSAKLFIHRSGRAARAGRIGYCWGIVDPEEMPYMVDLHVFLGR 434
Query: 121 KPVLA-DDSMKGKIRHQ-------------------------------DGM------FGK 142
K D+S KG + D M FG
Sbjct: 435 KMSTGRDESEKGVDEAEETATIDEVGESSSIVEGGDKSSETAEVTYTLDEMTPDMVHFGS 494
Query: 143 IPQGLMEDQISEIMNWVE------LDADM-EGIQKTCNNAYKKYVKSRPGASVESVKKVK 195
+P+ ++ +++ + ++ DA+M + + CNNA K+Y +SRP AS E V++ K
Sbjct: 495 VPESILVEEVENVRRLIDSELAGSQDAEMLRSLTRVCNNAMKQYRRSRPEASREGVRRAK 554
Query: 196 EL-----ELAT----------MQVHPLFRNI----------------GSAE--------- 215
L E T + HPL R++ GS+
Sbjct: 555 ALLEGDKEYGTGRRVLNARGGIPSHPLLRHVELIKIRSEVSQSASRTGSSTSQKQEEEMA 614
Query: 216 -------QEKFNLLTKMSEYRPPSTVLE 236
Q + + L M+ +RP TV E
Sbjct: 615 RKKMADLQRRQDFLRAMANFRPKETVFE 642
>gi|270358682|gb|ACZ81471.1| CNB00610 [Cryptococcus heveanensis]
Length = 974
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 138/252 (54%), Gaps = 31/252 (12%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +TK+HV+Y++++L AG S++IYS LD AR F+ VLVVTDVAARG
Sbjct: 306 IVFVSTKHHVDYINELLKTAGFRSSHIYSSLDQVARHQQLHHFRNRLTDVLVVTDVAARG 365
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP +D V+NY+FP ++FVHRVGR ARAGR G A+SLV+ D+ Y DL FLG
Sbjct: 366 LDIPVMDHVVNYDFPSGPRVFVHRVGRTARAGRKGNAWSLVTRDDWPYLFDLQTFLGL-- 423
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-----ELDADMEGIQKTCNNAYK 177
D M G G + + + +D IS+++ ++ E ++E +
Sbjct: 424 ----DRM--------GSNGDMLRNIPDDNISQMIEYITTSLDEQAPNLEMQRNVMRKGQA 471
Query: 178 KYVKSRPGASVESVKKVKEL--ELATMQVH-PLFRNIGSAEQ-------EKFNLLTKMSE 227
+ +SR A S +K K EL + Q H P+ +IG E+ + LL+ ++
Sbjct: 472 MFERSRGKADPASYRKAKLFGKELDSGQAHIPV--DIGLQERGESSLVSGRSRLLSSVAA 529
Query: 228 YRPPSTVLEFGK 239
Y P T+ E GK
Sbjct: 530 YTPAETIFEVGK 541
>gi|261327581|emb|CBH10557.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 843
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VF +K+HV+Y+ I+ IS + ++ +D R+ F + V++VTDVAAR
Sbjct: 281 ALVFVESKFHVDYLEAIMEAYHISCSAVHGQMDQEGRRNAVRAFAKRETSVMIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++F KLFVHRVGR ARAGRSG AYS+++ ++ +Y+DL+ FL R
Sbjct: 341 GLDLPLLDNVVNFSFAPTPKLFVHRVGRVARAGRSGAAYSILTFEDFPHYVDLMAFLNRP 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ DG +G++P+ ++ ++ I V+ D +++G+ K NA+KK+ +
Sbjct: 401 LQCRKEPGDLLFTADDGCYGRMPEDALQLELDFIRRLVQNDVELKGMTKVVENAHKKFAR 460
Query: 182 SRPGASVESVKKVK--ELELATMQVHPLF 208
++ A+ + ++ + E + + +HP+F
Sbjct: 461 TKKKATHDGIQTARQSEYQFDSTPLHPIF 489
>gi|72387978|ref|XP_844413.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62358560|gb|AAX79020.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
gi|70800946|gb|AAZ10854.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 843
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VF +K+HV+Y+ I+ IS + ++ +D R+ F + V++VTDVAAR
Sbjct: 281 ALVFVESKFHVDYLEAIMEAYHISCSAVHGQMDQEGRRNAVRAFAKRETSVMIVTDVAAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++F KLFVHRVGR ARAGRSG AYS+++ ++ +Y+DL+ FL R
Sbjct: 341 GLDLPLLDNVVNFSFAPTPKLFVHRVGRVARAGRSGAAYSILTFEDFPHYVDLMAFLNRP 400
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
+ DG +G++P+ ++ ++ I V+ D +++G+ K NA+KK+ +
Sbjct: 401 LQCRKEPGDLLFTADDGCYGRMPEDALQLELDFIRRLVQNDVELKGMTKVVENAHKKFAR 460
Query: 182 SRPGASVESVKKVK--ELELATMQVHPLF 208
++ A+ + ++ + E + + +HP+F
Sbjct: 461 TKKKATHDGIQTARQSEYQFDSTPLHPIF 489
>gi|58263322|ref|XP_569071.1| DEAD box RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108656|ref|XP_776981.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818048|sp|P0CR07.1|DBP10_CRYNB RecName: Full=ATP-dependent RNA helicase DBP10
gi|338818049|sp|P0CR06.1|DBP10_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP10
gi|50259664|gb|EAL22334.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223721|gb|AAW41764.1| DEAD box RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 802
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+HV+YV ++L G ++ IYS LD AR+ A F++ + VLVVTDVAARG
Sbjct: 309 IVFVATKHHVDYVAELLRTTGYRTSLIYSSLDQVARQQQLAGFRSHQSDVLVVTDVAARG 368
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP +D VINY+FP ++FVHRVGR ARAGR G AYSL+ ++ Y DL FLG +
Sbjct: 369 LDIPIMDHVINYDFPAGPRIFVHRVGRTARAGRKGTAYSLIVKEDFPYLCDLHTFLGTER 428
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-----ELDADMEGIQKTCNNAYK 177
+ G + + L +Q+SE + +V E + ++
Sbjct: 429 M--------------GEPADVLRSLPIEQLSENVEYVFHNLDETAPHITALRNVMRKGQG 474
Query: 178 KYVKSRPGASVESVKKVKELELATMQVHP----LFRNIGSAE--QEKFNLLTKMSEYRPP 231
+ +SR A+ S ++ K L A P +F + E +EK LL K++ + P
Sbjct: 475 MFERSRTKANPTSYRQAKSLASALSNNPPRIDDMFEDAMEVEVNEEKARLLAKVAAFTPS 534
Query: 232 STVLEFGK 239
TV E GK
Sbjct: 535 ETVFEVGK 542
>gi|407411508|gb|EKF33546.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 825
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 148/255 (58%), Gaps = 19/255 (7%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K+HV+Y+ I+ IS + ++ +D AR+ F + V++VTDVAARG
Sbjct: 283 LIFVESKFHVDYLQMIMEAYHISCSAVHGHMDQEARRNAVQAFSRRETHVMIVTDVAARG 342
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS ++ ++ YY+DL+ F+ R
Sbjct: 343 LDLPLLDNVVNFSFPSTPKLFVHRVGRVARAGRSGAAYSFLTFEDFPYYVDLMAFIDRP- 401
Query: 123 VLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
L +G + DG FG++P+ ++ ++ + D ++ + K +NA+KK+
Sbjct: 402 -LQCRRTEGDLLFTADDGCFGRMPEEDLQLELDFLRRLALTDVEVRNMAKVVDNAHKKFT 460
Query: 181 KSRPGASVESVKKVKE--LELATMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPPS 232
+++ A+ + +++ ++ + +HP+F + I +A++ +F+L ++
Sbjct: 461 RTKKKATHDGIQEARQEKYQFDNTPLHPIFVERLEAKRI-AADEARFDL----KRFKAKE 515
Query: 233 TVLEF--GKARFIII 245
+VLE G+ F II
Sbjct: 516 SVLEMIHGEKMFEII 530
>gi|401885301|gb|EJT49422.1| hypothetical protein A1Q1_01444 [Trichosporon asahii var. asahii
CBS 2479]
Length = 690
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 140/245 (57%), Gaps = 22/245 (8%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +TK+HVEY+ +L AG +YIY LD AR+ +F+ + +LVVTDVAARG
Sbjct: 267 IIFASTKHHVEYLSVLLQAAGYRVSYIYGSLDQVARQQQLKRFRAAETDLLVVTDVAARG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDIPS+ VINY+ P ++FVHRVGR ARAG+ G A++LV+ D+L Y DL +FL R
Sbjct: 327 IDIPSIPHVINYDLPTGVRVFVHRVGRTARAGQHGHAWTLVTRDDLPYMRDLEIFLER-- 384
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQKTCNNAYKKYVK 181
D +K K +G +P+ +E + + +++ ++ + ++ + +
Sbjct: 385 ----DFLKDK-----ESYGNLPRDSLETMLEYVQQTLDIEESQLPSLRGVMRRGQTMFER 435
Query: 182 SRPGASVESVKKVKELELA--TMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPPST 233
SR A+ ++ K VKE+ + VHP+F ++ +A ++K LL + Y+P T
Sbjct: 436 SRAKANKDAYKYVKEISASGGPSLVHPVFSSNEAPSDLQAAGRDK--LLASIEAYQPHET 493
Query: 234 VLEFG 238
+ E G
Sbjct: 494 IFEIG 498
>gi|336371386|gb|EGN99725.1| hypothetical protein SERLA73DRAFT_88322 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384141|gb|EGO25289.1| hypothetical protein SERLADRAFT_437047 [Serpula lacrymans var.
lacrymans S7.9]
Length = 962
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 141/257 (54%), Gaps = 25/257 (9%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ ++L G + ++IY LD AR F+ G +LVVTDVAA
Sbjct: 398 QTLIFAATKHHVEYLSQLLAAVGYAVSHIYGALDQGARTQQMDHFRRGLTSILVVTDVAA 457
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP A++FVHRVGR ARAGR G A+S V+S EL Y LDL LFLGR
Sbjct: 458 RGIDIPVLENVVNYDFPHGARVFVHRVGRTARAGRKGWAWSFVTSTELPYLLDLQLFLGR 517
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLME-DQISEIMNWVE-LDA---DMEGIQKTCNNA 175
L ++ KG ++ + G + + I E + +V LDA + +++
Sbjct: 518 P--LTNEVPKGA--GEEAYTSSLVLGTFQRENIDEDVEYVRALDAAHHSLPTLREVMRRG 573
Query: 176 YKKYVKSRPGASVESVKKVKELELATM---------QVHPLFRNIGSA-------EQEKF 219
Y +S+ AS S K+ KE+ + VHP+ G ++E+
Sbjct: 574 QGLYERSKGKASQASYKRAKEMGKSGQWALAGAVEAGVHPVLMMRGGVGEKAIDMQEERK 633
Query: 220 NLLTKMSEYRPPSTVLE 236
L+ ++ ++P TV E
Sbjct: 634 KLMKVVNAFKPAETVFE 650
>gi|323338349|gb|EGA79576.1| Dbp10p [Saccharomyces cerevisiae Vin13]
Length = 581
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 122/218 (55%), Gaps = 22/218 (10%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 339 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 398
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +EL Y LDL LFLG K
Sbjct: 399 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGEK 458
Query: 122 PVLAD------DSMK------GKIRHQDG----------MFGKIPQGLMEDQISEIMNWV 159
+L D MK GK +Q + G P+ +E N +
Sbjct: 459 ILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLM 518
Query: 160 ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
+ D++ +KT A K Y ++R AS ES+K+ KE+
Sbjct: 519 SSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEI 556
>gi|321252662|ref|XP_003192483.1| DEAD box RNA helicase [Cryptococcus gattii WM276]
gi|317458951|gb|ADV20696.1| DEAD box RNA helicase, putative [Cryptococcus gattii WM276]
Length = 798
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 132/252 (52%), Gaps = 33/252 (13%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+HV+YV ++L G ++ IYS LD AR+ A F+ + +LVVTDVAARG
Sbjct: 309 IVFVATKHHVDYVAELLSTTGYRTSLIYSSLDQVARQQQLAGFRNHQTDILVVTDVAARG 368
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR-- 120
+DIP +D VINY+FP ++FVHRVGR ARAGR G AYSL+ ++ Y DL FLG
Sbjct: 369 LDIPVMDHVINYDFPAGPRIFVHRVGRTARAGRKGTAYSLIVKEDFPYLCDLHTFLGTER 428
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-----ELDADMEGIQKTCN 173
+PV A S L +Q+SE + +V E + ++
Sbjct: 429 MGEPVEALRS------------------LPIEQLSENIEYVFHNLDETAPHLTSLRNVMR 470
Query: 174 NAYKKYVKSRPGASVESVKKVKELELATMQVHP----LFRNIGSAE--QEKFNLLTKMSE 227
+ +SR A+ S ++ K L A P +F + E +EK LL K++
Sbjct: 471 KGQGMFERSRTKANPTSYRQAKALASALSNNPPRIDDMFEDAMEDEVNEEKARLLAKVAA 530
Query: 228 YRPPSTVLEFGK 239
+ P TV E GK
Sbjct: 531 FTPSETVFEVGK 542
>gi|67598709|ref|XP_666233.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657185|gb|EAL36001.1| hypothetical protein Chro.30274, partial [Cryptosporidium hominis]
Length = 868
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 143/263 (54%), Gaps = 44/263 (16%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HV+Y+ KIL I +YIY ++D AR ++ + F+ K R LVVTD+AARG
Sbjct: 251 IIFCATKHHVDYIVKILESNNIIVSYIYGNMDQEARTMHLSTFRKNKSRALVVTDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP + VIN++FP KLFVHR GR ARAG+ G A+SL++S +L Y +DL LFLG K
Sbjct: 311 VDIPMIKYVINFDFPLSPKLFVHRTGRTARAGQHGRAFSLITSRDLPYTIDLCLFLGLKM 370
Query: 123 VL---------ADDSMKGKIR----------HQDGMFGKIPQGL---------------- 147
++DS+ + R H++G+ P L
Sbjct: 371 TTLTSKQTTDSSNDSLNTEKRVEASIRDDDIHEEGISFIKPASLNDFHVESRLILASFPD 430
Query: 148 MEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL-------ELA 200
+ +I I + ++++E +++ +AY Y+K+R +S ES+K+ +EL
Sbjct: 431 LTLEIESIERVLTENSEIERCRRSMESAYLLYLKTRTPSSKESLKRSRELLEKCGGASKI 490
Query: 201 TMQVHPLFRNIGSAEQEKFNLLT 223
M +HP NI + E N++T
Sbjct: 491 LMSIHPDL-NIDTNETN-LNIVT 511
>gi|71649079|ref|XP_813297.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70878168|gb|EAN91446.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 903
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 144/254 (56%), Gaps = 15/254 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HV+Y+ I+ IS + ++ +D AR+ F + V++VTDVAAR
Sbjct: 361 ALIFVESKFHVDYLQMIMEAYLISCSAVHGQMDQEARRNAVQAFSRRETHVMIVTDVAAR 420
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS ++ ++ YY+DL+ F+ R
Sbjct: 421 GLDLPLLDNVVNFSFPSTPKLFVHRVGRVARAGRSGAAYSFLTFEDFPYYVDLMAFIDRP 480
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
DG FG++P+ ++ ++ + D ++ + K +NA+KK+ +
Sbjct: 481 LQCRRTEGDLLFTADDGCFGRMPEEDLQLELDFLRRLALEDVEVRNMAKVVDNAHKKFTR 540
Query: 182 SRPGASVESVKKVKE--LELATMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPPST 233
++ A+ + +++ ++ + +HP+F + I +A++ +F+L ++ +
Sbjct: 541 TKKKATHDGIQEARQEKYQFDNTPLHPIFVERLEAKRI-AADEARFDL----KRFKAKES 595
Query: 234 VLEF--GKARFIII 245
VLE G+ F I+
Sbjct: 596 VLEMIHGEKMFQIM 609
>gi|407831412|gb|EKF98153.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 763
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 148/255 (58%), Gaps = 19/255 (7%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K+HV+Y+ I+ IS + ++ +D AR+ F + V++VTDVAARG
Sbjct: 222 LIFVESKFHVDYLQMIMEAYLISCSAVHGQMDQEARRNAVQAFSRRETHVMIVTDVAARG 281
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS ++ ++ YY+DL+ F+ R
Sbjct: 282 LDLPLLDNVVNFSFPSTPKLFVHRVGRVARAGRSGAAYSFLTFEDFPYYVDLMAFIDRP- 340
Query: 123 VLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
L +G + DG FG++P+ ++ ++ + D ++ + K +NA+KK+
Sbjct: 341 -LQCRRTEGDLLFTADDGCFGRMPEEDLQLELDFLRRLALEDVEVRNMAKVVDNAHKKFT 399
Query: 181 KSRPGASVESVKKVKE--LELATMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPPS 232
+++ A+ + +++ ++ + +HP+F + I +A++ +F+L ++
Sbjct: 400 RTKKKATHDGIQEARQEKYQFDNTPLHPIFVERLEAKRI-AADEARFDL----KRFKAKE 454
Query: 233 TVLEF--GKARFIII 245
+VLE G+ F I+
Sbjct: 455 SVLEMIHGEKMFQIM 469
>gi|340053299|emb|CCC47587.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 857
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HV+Y+ I+ IS + ++ +D AR+ F + V++VTDVAAR
Sbjct: 279 ALIFVESKFHVDYLQAIMEAYHISCSAVHGQMDQEARRNAVRDFSKRQASVMIVTDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD VIN++F KL+VHRVGR ARAGRSG AYS+++ ++ YY+DL+ FL R
Sbjct: 339 GLDLPLLDNVINFSFTPTPKLYVHRVGRVARAGRSGSAYSILTFEDFPYYVDLMAFLDRP 398
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
++ DG +G+IP+ +++ ++ + D ++ ++K +NA+KK+ +
Sbjct: 399 LQSRREAGDLLFTADDGCYGRIPEDMIQLELDFLRRLSLNDVEVRNMEKVVDNAHKKFAR 458
Query: 182 SRPGASVESVK--KVKELELATMQVHPLF-----RNIGSAEQEKFNL 221
++ A+ + ++ + +E + +HP+F R A++ +F L
Sbjct: 459 TKKKATHDGIQIARRQEFQFDNTPLHPIFVDRLGRKDIEADEARFGL 505
>gi|342180685|emb|CCC90161.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 842
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K+HV+ + I+ IS + ++ +D R+ F V++VTDVAARG
Sbjct: 281 LIFVESKFHVDCLESIMEAYHISCSAVHGQMDQEGRRNAVRAFSKRDTSVMIVTDVAARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ +Y+DL+ FL R
Sbjct: 341 LDLPLLDNVVNFSFPATPKLFVHRVGRVARAGRSGSAYSIITFEDFPHYVDLMTFLDRPL 400
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+ DG +G++P+ ++ ++ + D ++ + K +NA+KK++++
Sbjct: 401 QCRKEPGDLLFTADDGCYGRMPEDALQLELDFLRRLASEDVELRAMMKVVDNAHKKFMRT 460
Query: 183 RPGASVESVKKVK--ELELATMQVHPLF 208
R A+ +S++ + + + + +HP+F
Sbjct: 461 RKRATHDSIQTARQGQYQFDSTPLHPIF 488
>gi|343474607|emb|CCD13783.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K+HV+ + I+ IS + ++ +D R+ F V++VTDVAARG
Sbjct: 196 LIFVESKFHVDCLESIMEAYHISCSAVHGQMDQEGRRNAVRAFSKRDTSVMIVTDVAARG 255
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS+++ ++ +Y+DL+ FL R
Sbjct: 256 LDLPLLDNVVNFSFPATPKLFVHRVGRVARAGRSGSAYSIITFEDFPHYVDLMSFLDRPL 315
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
+ DG +G++P+ ++ ++ + D ++ + K +NA+KK++++
Sbjct: 316 QCRKEPGDLLFTADDGCYGRMPEDALQLELDFLRRLASEDVELRAMMKVVDNAHKKFMRT 375
Query: 183 RPGASVESVKKVK--ELELATMQVHPLF 208
R A+ +S++ + + + + +HP+F
Sbjct: 376 RKRATHDSIQTARQGQYQFDSTPLHPIF 403
>gi|253744188|gb|EET00428.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 900
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 125/243 (51%), Gaps = 28/243 (11%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+H EY+ IL + +T IY LD R I + F G+ +L+ TDVAARG
Sbjct: 302 LVFVATKHHCEYLTSILQANNLRATCIYGSLDQRQRTIALSDFDKGRYNILISTDVAARG 361
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDIPSLD VINYNFP K +VHRVGR ARAG G+ S++ DEL Y LD++L +G K
Sbjct: 362 IDIPSLDCVINYNFPSSGKNYVHRVGRSARAGSYGLCVSIIEGDELPYCLDVMLHIGVKF 421
Query: 122 -----------------PVLADD-----SMKGKIRHQ---DGMFGKIPQGLMEDQISEIM 156
L D + GK Q G+ IP L++ ++I+
Sbjct: 422 HSLRPSSDVVTTFLDNCKTLGVDYTTFACLVGKHATQSSFQGLTATIPGPLLDVIYADIL 481
Query: 157 NWV-ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLFRNIGSA 214
+ E D+ QKT NNA K+ R AS S ++ KE+ M HPL IG
Sbjct: 482 RTLGEYGQDIRAQQKTANNAMKQVNSMRKSASPMSTERAKEIISGNMIYEHPLVHKIGIE 541
Query: 215 EQE 217
+ E
Sbjct: 542 KAE 544
>gi|149241448|ref|XP_001526316.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013474|sp|A5DZT7.1|DBP10_LODEL RecName: Full=ATP-dependent RNA helicase DBP10
gi|146450439|gb|EDK44695.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 139/256 (54%), Gaps = 20/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK+HVEYV +L AG +YIY LD ARK F+ G ++LVVTDVAAR
Sbjct: 419 TIIFVPTKHHVEYVTSLLKDAGYLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAAR 478
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+S EL Y LDL +FLG+K
Sbjct: 479 GIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNSSELPYLLDLEIFLGKK 538
Query: 122 PVLAD-DSMKGKI--RHQDGMF-------------GKIPQGLMEDQISEIMNWVELDADM 165
+L K ++ + Q G F G IP+ +E N + + ++
Sbjct: 539 LLLTSMHEAKCELLKKKQGGSFIPPRINYTERLVVGAIPRLDLETFQELYENLLRNNYEI 598
Query: 166 EGIQKTCNNAYKKYVKSRPGASVESVKKVKE-LELATM-QVHPLFRNIGSAEQEKFNLLT 223
+ ++ K Y ++R AS ES+K+ KE LE + H LF + E+ K + L
Sbjct: 599 KVLKDVAAKGEKLYHRTRQPASQESLKRSKEILETNSWDDQHLLFGE--NLEKMKDDFLA 656
Query: 224 KMSEYRPPSTVLEFGK 239
K+ TV E K
Sbjct: 657 KLQNRNVKETVFELKK 672
>gi|388856698|emb|CCF49658.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Ustilago hordei]
Length = 1182
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 128/215 (59%), Gaps = 19/215 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G + ++IYS LD R I ++F+ G+ +L+VTDVAA
Sbjct: 470 QTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQTSLLIVTDVAA 529
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ V+N++FP +++ FVHRVGR ARAGR+G A+S+ ++ EL Y DL LFL R
Sbjct: 530 RGIDLPVLEHVVNFDFPPQSRTFVHRVGRTARAGRNGWAWSMCTNAELPYLCDLQLFLAR 589
Query: 121 KPVLADDSMKGKIR-------------HQDGMFGKIPQGLMEDQ----ISEIMNWVELDA 163
P+++ KI H+ + G P+ ++ + S ++N A
Sbjct: 590 -PLISSHMAVAKIAEGKDVEFADPLNLHESLVLGTFPREALDLETEFITSSLINTNSSTA 648
Query: 164 -DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
D+ +++ A +KY KS AS ES ++ KE+
Sbjct: 649 HDIPALRQVAERAQQKYEKSIAKASQESHRRAKEM 683
>gi|223996771|ref|XP_002288059.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977175|gb|EED95502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 384
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 90/120 (75%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F AT++HVEY+ +L +G+S+T IY ++D TAR+ N FQ+G+ +LVVTDVAA
Sbjct: 265 LTLIFAATRHHVEYLTLLLETSGLSATQIYGNMDNTARQQNLNAFQSGQCPILVVTDVAA 324
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP +D VI+Y FP AKLFVHR GR ARAGR G + +V +EL Y +DL LFLGR
Sbjct: 325 RGIDIPLIDHVIHYAFPPSAKLFVHRSGRAARAGRIGYCWGIVDPEELPYMVDLHLFLGR 384
>gi|405118285|gb|AFR93059.1| DEAD box RNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 803
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 131/252 (51%), Gaps = 33/252 (13%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+HV+YV ++L G ++ IYS LD AR+ A F+ + VLVVTDVAARG
Sbjct: 314 IVFVATKHHVDYVAELLRTTGYRTSLIYSSLDQVARQQQLAGFRNHQSDVLVVTDVAARG 373
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR-- 120
+DIP +D VINY+FP ++FVHRVGR ARAGR G AYSL+ ++ Y DL FLG
Sbjct: 374 LDIPIMDHVINYDFPAGPRIFVHRVGRTARAGRKGTAYSLIVKEDFPYLCDLHTFLGTAR 433
Query: 121 --KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWV-----ELDADMEGIQKTCN 173
+P A S L +Q+SE + +V E + ++
Sbjct: 434 MGEPAYALRS------------------LPIEQLSENVEYVFHNLDETAPHITALRNVMR 475
Query: 174 NAYKKYVKSRPGASVESVKKVKELELATMQVHP----LFRNIGSAE--QEKFNLLTKMSE 227
+ +SR A+ S ++ K L A P +F + E +EK LL K++
Sbjct: 476 KGQGMFERSRTKANPTSYRQAKSLASALSNNPPRIDDMFEDAMEDEVNEEKARLLAKVAA 535
Query: 228 YRPPSTVLEFGK 239
+ P TV E GK
Sbjct: 536 FTPSETVFEVGK 547
>gi|71651136|ref|XP_814251.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70879209|gb|EAN92400.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 861
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 147/256 (57%), Gaps = 19/256 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HV+Y+ I+ IS + ++ +D AR+ F + V++VTDVAAR
Sbjct: 319 ALIFVESKFHVDYLQMIMEAYLISCSAVHGQMDQEARRNAVQAFSRRETHVMIVTDVAAR 378
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD V+N++FP KLFVHRVGR ARAGRSG AYS ++ ++ YY+DL+ F+ R
Sbjct: 379 GLDLPLLDNVVNFSFPSTPKLFVHRVGRVARAGRSGAAYSFLTFEDFPYYVDLMAFIDRP 438
Query: 122 PVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
L +G + DG FG++P+ ++ ++ + D ++ + K +NA+KK+
Sbjct: 439 --LQCRRTEGDLLFTADDGCFGRMPEEDLQLELDFLRRLALEDVEVRNMAKVVDNAHKKF 496
Query: 180 VKSRPGASVESVKKVKE--LELATMQVHPLF------RNIGSAEQEKFNLLTKMSEYRPP 231
+++ A+ +++ ++ + +HP+F + I +A++ +F+L ++
Sbjct: 497 TRTKKKATHYGIQEARQEKYQFDNTPLHPIFVERLEAKRI-AADEARFDL----KRFKAK 551
Query: 232 STVLEF--GKARFIII 245
+VLE G+ F I+
Sbjct: 552 ESVLEMIHGEKMFEIM 567
>gi|452824107|gb|EME31112.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 763
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 14/248 (5%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F A+++ V+++ ++L I I+ + D TARK + G + +L+VTD+AAR
Sbjct: 312 TIIFLASRHQVDFLEQLLSSQNIPVAGIHGNKDSTARKRAVENLRNGHVPILLVTDLAAR 371
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP LD V++++ P KLFVHR GR RAG GV +LV+ D+L Y LDL LFL R+
Sbjct: 372 GLDIPFLDVVVHFDMPPTPKLFVHRAGRTGRAGHFGVILALVTPDDLPYSLDLFLFLSRE 431
Query: 122 PVLADDSMKG--KIRHQDGM------FGKIPQGLMEDQISEIMNWVELDADMEGIQKTCN 173
+A + +G I + + +G +P + + I N +E D++ +
Sbjct: 432 FHVASEENQGIENIGDEQSLLDTSYVYGLLPSASVSPLVDTIRNDIETSTDLQYAIQAAK 491
Query: 174 NAYKKYVKSRPGASVESVKKVKELELATMQ---VHPLFRNIGSAEQEKF--NLLTKMSEY 228
N +KY + RP AS S+++ KE+ LA +HP N Q K N++ ++ +
Sbjct: 492 NGSEKYKRIRPCASSASIQRAKEM-LAMYSKPWIHPWLMNSLQYNQCKTVENVVQQLKSW 550
Query: 229 RPPSTVLE 236
RP + V++
Sbjct: 551 RPHTAVVD 558
>gi|323509361|dbj|BAJ77573.1| cgd3_2330 [Cryptosporidium parvum]
Length = 557
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 59/284 (20%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HV+Y+ KIL I +YIY ++D AR ++ F+ K R L+VTD+AARG
Sbjct: 251 IIFCATKHHVDYIVKILESNNIIVSYIYGNMDQEARTMHLNTFRKNKSRALIVTDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP + VIN++FP KLFVHR GR ARAG+ G A+SL++S +L Y +DL LFLG K
Sbjct: 311 VDIPMIKYVINFDFPLSPKLFVHRTGRTARAGQHGRAFSLITSRDLPYTIDLCLFLGLKM 370
Query: 122 --------------PVLADDSMKGKIR----HQDGMFGKIPQGL---------------- 147
+ ++ ++ IR H++G+ P L
Sbjct: 371 TTLTSKQTTDSSNYSLNTENRVEAGIRDDDIHEEGISFIKPASLNDFHGESRLILAGFPD 430
Query: 148 MEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL-------ELA 200
+ +I I + ++++E +++ +AY Y+K+R +S ES+K+ +EL
Sbjct: 431 LTLEIESIERVLTENSEIERCRRSMESAYLLYLKTRTPSSKESLKRSRELLEKCGGVSKI 490
Query: 201 TMQVHP--------------LFRNIGSAEQEKFNLLTKMSEYRP 230
M +HP F+N+G LL + +RP
Sbjct: 491 LMSIHPDLNIDTNETNLNIVTFQNLGVISDP---LLDHLKSFRP 531
>gi|353241240|emb|CCA73067.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Piriformospora indica DSM 11827]
Length = 955
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 23/261 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T+VF +T++HV Y+ +L LAG + + I+ L AR +F K VLV TDVAA
Sbjct: 388 QTIVFVSTQHHVAYISALLTLAGYAVSSIHGTLTQAARTSALGQFLDHKTSVLVTTDVAA 447
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDIP L+ V+NY+FP ++FVHRVGR AR GR G A+S V+ DE+ Y LDL LFLGR
Sbjct: 448 RGIDIPILENVVNYDFPVGNRVFVHRVGRTARMGRKGWAWSFVARDEVPYVLDLQLFLGR 507
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
V S+ + G P+ ++ ++ I + + ++ ++ K Y
Sbjct: 508 PLVDKVSSLTESAFVDSLVLGPFPRDALDQEMEYIRGLDDTNYELTTMRGVMQRGTKMYN 567
Query: 181 KSRPGASVESVKKVKEL-------ELATMQVHPLF-----RNIGSAEQE----------- 217
+++ AS S + KE + + VHP + R G+ EQ+
Sbjct: 568 RTKGKASPVSYSRAKEFISNGKWGFVNSDAVHPAWKLRSIRERGTPEQKSGSTLVEPTKT 627
Query: 218 KFNLLTKMSEYRPPSTVLEFG 238
+ +LL ++ ++P TV E G
Sbjct: 628 RESLLESLARFKPSETVFEIG 648
>gi|126644777|ref|XP_001388110.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117338|gb|EAZ51438.1| hypothetical protein cgd3_2330 [Cryptosporidium parvum Iowa II]
Length = 862
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HV+Y+ KIL I +YIY ++D AR ++ F+ K R L+VTD+AARG
Sbjct: 251 IIFCATKHHVDYIVKILESNNIIVSYIYGNMDQEARTMHLNTFRKNKSRALIVTDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP + VIN++FP KLFVHR GR ARAG+ G A+SL++S +L Y +DL LFLG K
Sbjct: 311 VDIPMIKYVINFDFPLSPKLFVHRTGRTARAGQHGRAFSLITSRDLPYTIDLCLFLGLKM 370
Query: 122 --------------PVLADDSMKGKIR----HQDGMFGKIPQGL---------------- 147
+ ++ ++ IR H++G+ P L
Sbjct: 371 TTLTSKQTTDSSNYSLNTENRVEAGIRDDDIHEEGISFIKPASLNDFHGESRLILAGFPD 430
Query: 148 MEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL-------ELA 200
+ +I I + ++++E +++ +AY Y+K+R +S ES+K+ +EL
Sbjct: 431 LTLEIESIERVLTENSEIERCRRSMESAYLLYLKTRTPSSKESLKRSRELLEKCGGVSKI 490
Query: 201 TMQVHPLFRNIGSAEQEKFNLLT 223
M +HP NI + E N++T
Sbjct: 491 LMSIHPDL-NIDTNETN-LNIVT 511
>gi|159110427|ref|XP_001705473.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157433558|gb|EDO77799.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 900
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 132/249 (53%), Gaps = 33/249 (13%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+H EY+ IL + +T IY LD R + ++F G+ +L+ TDVAARG
Sbjct: 302 LVFVATKHHCEYLTSILQANNLRATCIYGSLDQKQRTLALSEFDKGRYSILISTDVAARG 361
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDIP+L+ VINYNFP K +VHRVGR ARAG G+ S++ DEL Y LD++L +G K
Sbjct: 362 IDIPNLNCVINYNFPSSGKNYVHRVGRSARAGSYGLCVSIIEGDELPYCLDVMLHIGIKF 421
Query: 122 --PVLADDSMKGKIRHQD-----------------------GMFGKIPQGLMEDQISEIM 156
+DD++ + + + G+ IP L++ ++++
Sbjct: 422 HSMRSSDDAVATFLNNCNTLGVDCSTFACLVGKHATHSPFQGLVASIPGHLLDVIYADVL 481
Query: 157 NWV-ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLFR----- 209
+ E D+ QKT NNA K+ R AS S ++ KE+ M HPL R
Sbjct: 482 RTLGEYGQDVRTQQKTANNAMKQVNSMRKSASPLSTERAKEIITGNMIYEHPLVRKLDIE 541
Query: 210 NIGSAEQEK 218
+GSA +EK
Sbjct: 542 TVGSAGKEK 550
>gi|308159948|gb|EFO62462.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 901
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 33/249 (13%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+H EY+ +L + +T IY LD R + + F G+ +L+ TDVAARG
Sbjct: 302 LVFVATKHHCEYLTSVLQANNLRATCIYGSLDQKQRTLALSDFDKGRYSILISTDVAARG 361
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDIP+L+ VINYNFP K +VHRVGR ARAG G+ S++ DEL Y LD++L +G K
Sbjct: 362 IDIPNLNCVINYNFPSSGKNYVHRVGRSARAGSYGLCISIIEGDELPYCLDVMLHIGIKF 421
Query: 122 -PVLADDS---------------------MKGKIRHQ---DGMFGKIPQGLMEDQISEIM 156
+ + D+ + GK Q G+ IP L++ ++++
Sbjct: 422 HSMRSSDAAVATFLNNCNTLGVDCSTFACLVGKHATQSPFQGLVASIPGHLLDVIYADVL 481
Query: 157 NWV-ELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM-QVHPLFRNI--- 211
+ E D+ QKT NNA K+ R AS S ++ KE+ M HPL R +
Sbjct: 482 RTLGEYGQDIRTQQKTANNAMKQVNSMRKSASPLSTERAKEIITGNMIYEHPLVRKLDIK 541
Query: 212 --GSAEQEK 218
GSA +EK
Sbjct: 542 ATGSAGEEK 550
>gi|443893869|dbj|GAC71325.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 1155
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G + ++IYS LD R I ++F+ G+ +L+VTDVAA
Sbjct: 470 QTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQTSLLIVTDVAA 529
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ V+NY+FP + + FVHRVGR ARAGR+G A+S+ ++ EL Y DL LFL R
Sbjct: 530 RGIDLPVLEHVVNYDFPPQPRTFVHRVGRTARAGRNGWAWSMCTNAELPYLCDLQLFLAR 589
Query: 121 KPV--------LADDSMKGKIR----HQDGMFGKIPQGLMEDQISEIMNWVELDA----- 163
V LAD G H + G P+ ++ + I + + +
Sbjct: 590 PLVSSHTAVAALADGQEIGDADSLGLHDSLVLGTFPREALDLETEFISSSLTNTSSSTVH 649
Query: 164 DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
D +++ A +KY KS A+ ES ++ KE+
Sbjct: 650 DFPALKQVAERAQQKYEKSITKAAQESHRRAKEM 683
>gi|350592518|ref|XP_003132951.3| PREDICTED: ATP-dependent RNA helicase DDX54-like [Sus scrofa]
Length = 684
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
Query: 71 VINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLA--DDS 128
VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE+ Y LDL LFLGR LA +
Sbjct: 215 VINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSLTLACPHEE 274
Query: 129 MKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASV 188
G +D + G++PQG+++D+ + +E ++ + + +NA ++Y++SRP S
Sbjct: 275 PTGAGGGRDCVLGRVPQGVVDDEDCGLRTTLEASLELRSLGRVADNAQQQYMRSRPAPSP 334
Query: 189 ESVKKVKELELATMQVHPLF 208
ES+K+ KEL+LA + +HPLF
Sbjct: 335 ESIKRAKELDLAGLGLHPLF 354
>gi|308197153|gb|ADO17669.1| CNB00610 [Tremella mesenterica]
Length = 700
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 20/241 (8%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HVEY+ +L AG S YIY LD ARK F+ G+ ++LVVTDVAARG
Sbjct: 301 IIFVATKHHVEYLVCLLRAAGYESAYIYGSLDQVARKTQIDSFRAGRQQILVVTDVAARG 360
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP + VINY+FP + FVHRVGR ARAGR G+A+SLV++ ++ + DL
Sbjct: 361 LDIPMIGNVINYDFPTGVRGFVHRVGRTARAGRRGMAWSLVTTGDIAHLFDL-------- 412
Query: 123 VLADDSMKGKI-RHQDGMFGKIPQGLMEDQISEI-MNWVELDADMEGIQKTCNNAYKKYV 180
D+++ KI + G++PQ ++E I + E D + ++ + +
Sbjct: 413 ---DEALSVKIFDASPPLIGRLPQQVLETHRERIAVGLAESDRSLAALRMVKDRGQAMFE 469
Query: 181 KSRPGASVESVKKVK-----ELELATMQVHPLF--RNIGSAEQEKFNLLTKMSEYRPPST 233
+S+ AS ++ + K + + + V P+F + A + +LL + YRP ++
Sbjct: 470 RSKSRASADAHRMSKLWIRSSHDGSDLAVLPVFVTSHPAVANERCDDLLRAIETYRPRTS 529
Query: 234 V 234
V
Sbjct: 530 V 530
>gi|392575556|gb|EIW68689.1| hypothetical protein TREMEDRAFT_39597 [Tremella mesenterica DSM
1558]
Length = 721
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 20/241 (8%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HVEY+ +L AG S YIY LD ARK F+ G+ ++LVVTDVAARG
Sbjct: 300 IIFVATKHHVEYLVCLLRAAGYESAYIYGSLDQVARKTQIDSFRAGRQQILVVTDVAARG 359
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP + VINY+FP + FVHRVGR ARAGR G+A+SLV++ ++ + DL
Sbjct: 360 LDIPMIGNVINYDFPTGVRGFVHRVGRTARAGRRGMAWSLVTTGDIAHLFDL-------- 411
Query: 123 VLADDSMKGKI-RHQDGMFGKIPQGLMEDQISEI-MNWVELDADMEGIQKTCNNAYKKYV 180
D+++ KI + G++PQ ++E I + E D + ++ + +
Sbjct: 412 ---DEALSVKIFDASPPLIGRLPQQVLETHRERIAVGLAESDRSLAALRMVKDRGQAMFE 468
Query: 181 KSRPGASVESVKKVK-----ELELATMQVHPLF--RNIGSAEQEKFNLLTKMSEYRPPST 233
+S+ AS ++ + K + + + V P+F + A + +LL + YRP ++
Sbjct: 469 RSKSRASADAHRMSKLWIRSSHDGSDLAVLPVFVTSHPAVANERCDDLLRAIETYRPRTS 528
Query: 234 V 234
V
Sbjct: 529 V 529
>gi|1764094|gb|AAB39865.1| ATP-dependent RNA helicase [Leishmania amazonensis]
Length = 855
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 146/248 (58%), Gaps = 18/248 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F +K+HVE++ IL IS++ ++ +D AR++ F + V+VVTDVAAR
Sbjct: 275 ALIFVESKFHVEFLLMILTAYSISTSAVHGQMDQEARRLAVRSFAKRESSVMVVTDVAAR 334
Query: 62 G--IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
G +D+ LD ++ ++FP KLFVHRVGR ARAGRSG AYS+++ ++ YY+DL+ F+G
Sbjct: 335 GYGLDL-LLDNIVYFSFPFNPKLFVHRVGRVARAGRSGTAYSIMTFEDFPYYVDLMQFIG 393
Query: 120 RKPVLADDSMKGKI--RHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYK 177
R L + G + DG +G++P+ ++ ++ + E D ++ + + NA+K
Sbjct: 394 RP--LQSSPVPGDLLFTADDGCYGRLPEEDIQLELDFLKRLHENDVEVRNMARVVENAHK 451
Query: 178 KYVKSRPGASVESVKKVKELELA--TMQVHP-LFRNIGS----AEQEKFNLLTKMSEYRP 230
K+ +++ S E++++ ++ + A +HP L + +GS A++ +F+L ++P
Sbjct: 452 KFNRTKKKPSHEAIQEARKPQYAFDRTPLHPMLLKRLGSTRVRADEVRFDL----KRFKP 507
Query: 231 PSTVLEFG 238
LE G
Sbjct: 508 KELFLEIG 515
>gi|221482850|gb|EEE21181.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 983
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T++ ++ S IY +D T R A F+ GKI VL+VTDVAARG
Sbjct: 271 LVFASTRHQATFLQCFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP L +VIN++FP AKLFVHRVGR ARAGRSG A+SLV+ D+L Y ++L+ FLG +
Sbjct: 331 LDIPHLPSVINFDFPSSAKLFVHRVGRTARAGRSGTAFSLVTGDDLPYAVELMSFLGGRL 390
Query: 123 VL-------ADDSMKGKI------RHQDGMFGKI-------------PQGLMEDQISEIM 156
V ADD+ + + + +D + P L++ +
Sbjct: 391 VPPFSFSSEADDTRQEETEDVDLPKPEDASKDTVSPSPSSGNYVLAGPPALVDPFVEFCE 450
Query: 157 NWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
+ + D ++ KT ++A Y K+RP AS +SV++ K L
Sbjct: 451 SLLHTDDEVAAAHKTASSANAMYYKTRPSASRQSVERAKGL 491
>gi|237840673|ref|XP_002369634.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967298|gb|EEB02494.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221503359|gb|EEE29057.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 983
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T++ ++ S IY +D T R A F+ GKI VL+VTDVAARG
Sbjct: 271 LVFASTRHQATFLQCFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP L +VIN++FP AKLFVHRVGR ARAGRSG A+SLV+ D+L Y ++L+ FLG +
Sbjct: 331 LDIPHLPSVINFDFPSSAKLFVHRVGRTARAGRSGTAFSLVTGDDLPYAVELMSFLGGRL 390
Query: 123 VL-------ADDSMKGKI------RHQDGMFGKI-------------PQGLMEDQISEIM 156
V ADD+ + + + +D + P L++ +
Sbjct: 391 VPPFSFSSEADDTRQEEAEDVDLPKPEDASKDTVSPSPSSGNYVLAGPPALVDPFVEFCE 450
Query: 157 NWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
+ + D ++ KT ++A Y K+RP AS +SV++ K L
Sbjct: 451 SLLHTDDEVAAAHKTASSANAMYYKTRPSASRQSVERAKGL 491
>gi|71022233|ref|XP_761347.1| hypothetical protein UM05200.1 [Ustilago maydis 521]
gi|74699940|sp|Q4P3W3.1|DBP10_USTMA RecName: Full=ATP-dependent RNA helicase DBP10
gi|46097655|gb|EAK82888.1| hypothetical protein UM05200.1 [Ustilago maydis 521]
Length = 1154
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 19/215 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G + ++IYS LD R I ++F+ G+ +L+VTDVAA
Sbjct: 470 QTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQNSLLIVTDVAA 529
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ V+N++FP + + FVHRVGR ARAGR+G A+S+ ++ EL Y DL LFL R
Sbjct: 530 RGIDLPVLEHVVNFDFPPQPRTFVHRVGRTARAGRNGWAWSMCTNAELPYLCDLQLFLAR 589
Query: 121 KPVLADDSMKGKIR-------------HQDGMFGKIPQGLMEDQISEIMNWVELDA---- 163
P+++ + + H + G +P+ ++ + I + + +
Sbjct: 590 -PLVSSHTAIAALANGRDVASADALGLHDSLILGTLPREALDLETEFISSSLTNTSSSTA 648
Query: 164 -DMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
D ++ + A +KY KS AS ES ++ KE+
Sbjct: 649 HDFPALRAVADRAQQKYEKSIAKASQESHRRAKEM 683
>gi|95007351|emb|CAJ20571.1| dead-box helicase, putative [Toxoplasma gondii RH]
Length = 822
Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T++ ++ S IY +D T R A F+ GKI VL+VTDVAARG
Sbjct: 271 LVFASTRHQATFLQCFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP L +VIN++FP AKLFVHRVGR ARAGRSG A+SLV+ D+L Y ++L+ FLG +
Sbjct: 331 LDIPHLPSVINFDFPSSAKLFVHRVGRTARAGRSGTAFSLVTGDDLPYAVELMSFLGGRL 390
Query: 123 V-------LADDSMKGKI------RHQDGMFGKI-------------PQGLMEDQISEIM 156
V ADD+ + + + +D + P L++ +
Sbjct: 391 VPPFSFSSEADDTRQEETEDVDLPKPEDASKDTVSPSPSSGNYVLAGPPALVDPFVEFCE 450
Query: 157 NWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKEL 197
+ + D ++ KT ++A Y K+RP AS +SV++ K L
Sbjct: 451 SLLHTDDEVAAAHKTASSANAMYYKTRPSASRQSVERAKGL 491
>gi|428671631|gb|EKX72549.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 773
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 126/216 (58%), Gaps = 12/216 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK+HVE+ +L G + +Y +D + R ++FQ+ K +L+VTD+AARG
Sbjct: 251 ILFVATKHHVEFFRCLLTKNGHKVSAVYGSMDMSMRTSQMSQFQSFKTTILIVTDLAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+P +D V+N++FP +KLF+HRVGR ARAG+ G+A SL++ + + ++L +GRK
Sbjct: 311 LDLPLVDIVVNFDFPHSSKLFIHRVGRTARAGKQGLAVSLLTLYDFAFCFEILETIGRKM 370
Query: 123 VLAD---DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
++ + +G +++ M G + G + + +I + D+++E + + N+Y Y
Sbjct: 371 AISGATPEGSEGGLKNDTCMVGTV--GNVVSWVEKINEQISNDSELESLNTSMENSYNLY 428
Query: 180 VKSRPGASVESVKKVKEL-------ELATMQVHPLF 208
K+RP S ++ K + L + VHPL+
Sbjct: 429 YKTRPNPSNIAIDKSQSLLESLGGIAVIAASVHPLY 464
>gi|145473681|ref|XP_001462504.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430344|emb|CAK95131.1| unnamed protein product [Paramecium tetraurelia]
Length = 706
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 140/238 (58%), Gaps = 13/238 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T++ V+ + L IS+ ++Y +D RK F+ +++VL+VTD+A+RG
Sbjct: 253 LIFASTRFLVDMLSYALNKFHISNVHVYGKMDQLDRKEQLDNFKRNQVKVLIVTDLASRG 312
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+P + VI+Y++P K+F+HR GR ARAG++G Y+L+SS+E+ Y + ++++GRK
Sbjct: 313 IDLPFVANVIHYDYPSNPKIFIHRSGRTARAGKAGYVYALISSEEILYIKETMIYVGRKL 372
Query: 123 VLADDSMKGKIRHQDGMFGKIP-QGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
V D + +G +P + LM++Q E +N + D + + ++ A +K+ K
Sbjct: 373 VNEGDFSDPSL----SFYGHMPIELLMQNQ--EKLNDLNDDIEFQNYKEIATRANEKFRK 426
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGK 239
+R A KKVK + T VHPLF++ E++ ++L ++ ++ +V+E K
Sbjct: 427 TRGSA-----KKVK-TNIDTSLVHPLFKDKIQVEEDTKDMLKQIKNFKSAQSVIEIKK 478
>gi|116196072|ref|XP_001223848.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
gi|118575168|sp|Q2H0R2.1|DBP10_CHAGB RecName: Full=ATP-dependent RNA helicase DBP10
gi|88180547|gb|EAQ88015.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
Length = 762
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 78/102 (76%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FTATK+HVEY+ +L AG S +YIY LD TARKI F+ G+ +LVVTDVAAR
Sbjct: 365 TIIFTATKHHVEYIAHLLRHAGFSVSYIYGSLDQTARKIQVDNFRRGRTNILVVTDVAAR 424
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
GIDIP L VINY+FP + K+FVHRVGR ARAG+ G AY+L+
Sbjct: 425 GIDIPVLANVINYDFPPQPKIFVHRVGRTARAGQRGWAYALL 466
>gi|343428855|emb|CBQ72400.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Sporisorium reilianum SRZ2]
Length = 1178
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 87/120 (72%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
T++F ATK+HVEY+ +L G + ++IYS LD R I ++F+ G+ +L+VTDVAA
Sbjct: 476 QTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQTSLLIVTDVAA 535
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P L+ V+N++FP + + FVHRVGR ARAGR+G A+S+ ++ EL Y DL LFL R
Sbjct: 536 RGIDLPVLEHVVNFDFPPQPRTFVHRVGRTARAGRNGWAWSMCTNAELPYLCDLQLFLAR 595
>gi|323449287|gb|EGB05176.1| hypothetical protein AURANDRAFT_72308 [Aureococcus anophagefferens]
Length = 1379
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 41/276 (14%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGIS--STYIYSDLDPTARKINAAKFQTGKIRVLVVTDV 58
+T+VF AT++H E + ++ A S + IY +D AR + F+ G R+L+VTDV
Sbjct: 791 LTIVFVATRHHCELILAVVTAAFPSQPAAAIYGAMDQEARTTHMRDFRRGVTRMLIVTDV 850
Query: 59 AARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
AARG+D+P +D VINY+ ++LFVHR GR AR GR GVA SLV +EL Y LDL L
Sbjct: 851 AARGLDVPLVDNVINYHMAPASRLFVHRCGRAARQGRPGVALSLVDPEELPYMLDLHTLL 910
Query: 119 GRKPVLA----------DDSMKGKIRHQ------------DGM-FGKIPQGLMEDQISEI 155
R P A D ++K + DG+ +G I Q L++ + +
Sbjct: 911 DRVPADACGPQPQERQDDHTIKVSLPSALLSYTRAEGWTPDGIHYGNIRQALLDLEARTL 970
Query: 156 MNWVELDAD-MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLF-RNIGS 213
+ D + + + +NA ++Y K+RP AS + K + L ++HPLF I S
Sbjct: 971 AVASQNDGGLLLALTRVADNAMQQYRKTRPAASKRAATHAKIIRL--TELHPLFLGTIRS 1028
Query: 214 A------------EQEKFNLLTKMSEYRPPSTVLEF 237
A +++ L ++S YRP ++LE
Sbjct: 1029 AISTDETASAHFLDRDNCVLRARLSSYRPNQSILEM 1064
>gi|307104599|gb|EFN52852.1| hypothetical protein CHLNCDRAFT_26393, partial [Chlorella
variabilis]
Length = 313
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 82/102 (80%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +T++HVE++ +L G+ + Y++ ++D ARKI+ AKF+ G++R+LVVTDVAAR
Sbjct: 212 TIIFASTRHHVEFLAGLLAQDGLEAAYVHGNMDQAARKIHIAKFRAGRVRLLVVTDVAAR 271
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
G+DIP LD V++Y+FP K KLFVHR GR ARAGRSG +YSL+
Sbjct: 272 GLDIPLLDNVVHYDFPPKPKLFVHRSGRAARAGRSGTSYSLL 313
>gi|209880309|ref|XP_002141594.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209557200|gb|EEA07245.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 939
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 84/117 (71%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATK+HVEY+ KIL I+ IY ++D AR F+ K RV++VTD+AARG
Sbjct: 252 MVFCATKHHVEYLAKILTECNINIGSIYGNMDQDARNAQLNSFRRNKTRVMIVTDIAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
+DIP L+ VIN+++P AKLFVHR GR RAG+ G A+SLV++ +L Y +DL+LFLG
Sbjct: 312 LDIPLLENVINFDYPLSAKLFVHRTGRTGRAGKMGKAFSLVTARDLPYTVDLMLFLG 368
>gi|294871963|ref|XP_002766100.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239866724|gb|EEQ98817.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 227
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 31/206 (15%)
Query: 33 LDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCAR 92
+D T R + +KF++GK VL+VTDVAARGIDIP LD VINY+FP +KLFVHR GR AR
Sbjct: 1 MDQTQRTSSLSKFRSGKASVLLVTDVAARGIDIPQLDYVINYDFPSSSKLFVHRCGRTAR 60
Query: 93 AGRSGVAYSLVSSDELCYYLDLLLFLGR-----------KPVLADDSM--KGKIRHQDG- 138
AG G+ SLV+ D++ Y ++L+LFLG +P+ +D +G++ DG
Sbjct: 61 AGAKGLCASLVTHDDMPYAVELMLFLGMPSQFLGRKLGLQPLGSDHPFPAEGEV-GGDGV 119
Query: 139 ------MFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVK 192
+ G IP +++++ + V DA++ +Q++ +AY Y K+RP AS +SV+
Sbjct: 120 DEKRLCVIGGIPS--VQEEVETVRRLVSGDAELASLQRSMMSAYHLYYKTRPAASNQSVR 177
Query: 193 KVKELELATM--------QVHPLFRN 210
+ K + A HP FR
Sbjct: 178 RAKLILRAEAGGPQRLLDTPHPAFRT 203
>gi|123478847|ref|XP_001322584.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121905433|gb|EAY10361.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 703
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 14/196 (7%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VF AT+YH E++ L + + S IY ++D R + A F G +R LVVTDVAAR
Sbjct: 240 SLVFVATRYHAEFLSAFLRDSNLKSAAIYGNMDQDERSSSLAAFSRGSLRCLVVTDVAAR 299
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DI L+AV+NY+FP + K+F+HR GR RAG G S V+ DEL YY +G +
Sbjct: 300 GLDIEGLEAVVNYDFPERPKVFLHRAGRSGRAGLKGEVVSFVTHDELPYY------VGAR 353
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
L ++ + ++ Q + DQ++ + ++ + D+ ++++ +N KKYVK
Sbjct: 354 EALQEE--------EPWTLRRVMQSEINDQLTIYEDAMKRNYDLTVLRQSMDNGEKKYVK 405
Query: 182 SRPGASVESVKKVKEL 197
SR A + + KE+
Sbjct: 406 SRKNAKPQWLTMAKEI 421
>gi|379699004|ref|NP_001243975.1| ATP-dependent RNA helicase DDX54-like protein [Bombyx mori]
gi|373882595|gb|AEY78647.1| ATP-dependent RNA helicase DDX54-like protein [Bombyx mori]
Length = 605
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF ATK+HVEY+H IL AGISSTY YS LDP+ARKI +F K VL+VTDVAARG
Sbjct: 289 VVFAATKHHVEYLHLILQQAGISSTYAYSGLDPSARKIALGRFTNKKCSVLIVTDVAARG 348
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRV 87
+D+P+LD VINYNFP K KLFVHR
Sbjct: 349 LDLPALDTVINYNFPAKPKLFVHRT 373
>gi|145532168|ref|XP_001451845.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419511|emb|CAK84448.1| unnamed protein product [Paramecium tetraurelia]
Length = 422
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 127/217 (58%), Gaps = 21/217 (9%)
Query: 28 YIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFPCKAKLFVHRV 87
++Y +D RK F+ +++VL+VTD+A+RGID+P + VI+Y++P K+F+HR
Sbjct: 3 HVYGKMDQLDRKEQLDNFKRNQVKVLIVTDLASRGIDLPFVANVIHYDYPSNPKIFIHRS 62
Query: 88 GRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPV----LADDSMKGKIRHQDGMFGKI 143
GR ARAG++G Y+L+SS+E+ Y + ++++GRK V +D S +G +
Sbjct: 63 GRTARAGKAGYVYALISSEEILYIKETMVYVGRKLVNDGDFSDPSQ--------AFYGSM 114
Query: 144 P-QGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATM 202
P + LM++Q E +N + D + + ++ A +K+ K+R A KKVK + T
Sbjct: 115 PIELLMQNQ--EKLNDLNDDIEFQNFKEIATRANEKFRKTRGSA-----KKVK-TNIDTS 166
Query: 203 QVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGK 239
VHPLF++ E++ ++L ++ ++ +V+E K
Sbjct: 167 LVHPLFKDKIQVEEDTKDMLNQIKNFKSAQSVIEIKK 203
>gi|401396617|ref|XP_003879866.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
gi|325114274|emb|CBZ49831.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
Length = 1089
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 85/130 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T++ ++ S IY +D T R A F+ GKI VL+VTDVAARG
Sbjct: 270 LVFASTRHQATFLQCFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAARG 329
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP L +VIN++FP AKLFVHRVGR ARAGR+G A+SLV+ D+L Y ++L+ FLG +
Sbjct: 330 LDIPHLPSVINFDFPSSAKLFVHRVGRTARAGRAGTAFSLVTGDDLPYAVELMSFLGGRL 389
Query: 123 VLADDSMKGK 132
V S G+
Sbjct: 390 VPPFSSSSGE 399
>gi|85000347|ref|XP_954892.1| ATP-dependent (RNA) helicase [Theileria annulata strain Ankara]
gi|65303038|emb|CAI75416.1| ATP-dependent (RNA) helicase, putative [Theileria annulata]
Length = 811
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 33/219 (15%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VF AT++HVE+ +L G S + +Y +D R I ++F++ K R+L+VTDVA+R
Sbjct: 257 SIVFVATRHHVEFFRTLLHKLGYSVSCVYGTMDMDNRVIEMSRFRSNKTRILLVTDVASR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP +D V+N++FP KLF+HRVGR ARAGR G+A S+V++ + + L +L L +
Sbjct: 317 GLDIPFVDLVVNFDFPYSTKLFIHRVGRTARAGRQGLAVSIVTNKDFSFLLQILCKLNKS 376
Query: 122 PVLA-------------------DDSMKGKIR-HQDGMFGKIPQGLMEDQ---------- 151
+L ++S IR D + + G +++
Sbjct: 377 LLLPINNSSNTSNSGNSEDASTIENSSGNVIRIKNDKLVSEELAGEVDNNYCVIGSCNDL 436
Query: 152 ---ISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGAS 187
I + N + D ++ ++ N+Y Y K+RP +
Sbjct: 437 NHLIENVNNKISEDPELSAQFRSMQNSYNLYYKTRPNPT 475
>gi|71027139|ref|XP_763213.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68350166|gb|EAN30930.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 839
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 85/123 (69%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT++HVE+ +L G S + +Y +D R I ++F++ K R+L+VTDVA+R
Sbjct: 257 TIVFVATRHHVEFFRTLLLKLGYSISCVYGTMDMDNRVIEMSRFRSNKTRILLVTDVASR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP +D VIN++FP KLF+HRVGR ARAGR G+A S+V++ + + L +L L +
Sbjct: 317 GLDIPLVDLVINFDFPYSTKLFIHRVGRTARAGRQGLAVSIVTNKDFSFLLQILYKLNKT 376
Query: 122 PVL 124
+L
Sbjct: 377 LLL 379
>gi|403223265|dbj|BAM41396.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 958
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 83/122 (68%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F AT++HVE+ +LG S + IY ++ AR I ++F+ GK ++LVVTD+A+RG
Sbjct: 269 ILFVATRHHVEFFRSLLGGMNYSISCIYGSMEMNARMIEMSRFRGGKTKILVVTDLASRG 328
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP +D VINY+FP KLFVHRVGR ARAGR G + S++ + ++ Y L +L R
Sbjct: 329 LDIPFVDLVINYDFPYSTKLFVHRVGRTARAGRQGKSVSILINKDMSYLLQILQKFNRHL 388
Query: 123 VL 124
VL
Sbjct: 389 VL 390
>gi|300122776|emb|CBK23793.2| unnamed protein product [Blastocystis hominis]
Length = 419
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F AT++H EY+ IL GIS+ IY ++ TAR +N A+F+ K+ VLVVTDVAARG
Sbjct: 294 LIFVATRFHAEYITSILNHTGISTVCIYGTMEMTARTMNLAQFRDNKVPVLVVTDVAARG 353
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DIP ++ VI+++ P KL+VHR GR AR GR G + + E+ Y LD+ LFL +
Sbjct: 354 LDIPLVNTVIHFDCPTSPKLYVHRTGRTARGGREGTSVVFATVAEIPYILDVALFLNQ 411
>gi|300175040|emb|CBK20351.2| unnamed protein product [Blastocystis hominis]
Length = 466
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F AT++H EY+ IL GIS+ IY ++ TAR +N A+F+ K+ VLVVTDVAARG
Sbjct: 341 LIFVATRFHAEYITSILNHTGISTVCIYGTMEMTARTMNLAQFRDNKVPVLVVTDVAARG 400
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DIP ++ VI+++ P KL+VHR GR AR GR G + + E+ Y LD+ LFL +
Sbjct: 401 LDIPLVNTVIHFDCPTSPKLYVHRTGRTARGGREGTSVVFATVAEIPYILDVALFLNQ 458
>gi|294929941|ref|XP_002779431.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239888539|gb|EER11226.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 863
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF AT+++VE+ +L GI++ IY +D T R + +KF++GK VL+VTDVAAR
Sbjct: 292 TIVFVATRHNVEFFASLLTQVGITNAPIYGSMDQTQRTSSLSKFRSGKASVLLVTDVAAR 351
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL--CYYL 112
GIDIP LD VINY+FP +KLFVHR GR ARAG G + S + Y+L
Sbjct: 352 GIDIPQLDYVINYDFPSSSKLFVHRCGRTARAGAKGXXGPRLDSRSMMSAYHL 404
>gi|428173676|gb|EKX42577.1| hypothetical protein GUITHDRAFT_46749, partial [Guillardia theta
CCMP2712]
Length = 385
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F AT++ VE + ++LG AG ++ D RKI F +++VLVVTD+AARG
Sbjct: 262 LIFCATRHSVELITQVLGHAGFQVGGLHGHADNEQRKILVEDFAKKRLQVLVVTDLAARG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDIP LD VIN++FP KLF+HR GR RAG G YSL++ ++L + +D L LGRK
Sbjct: 322 IDIPLLDYVINFDFPSTPKLFIHRCGRAGRAGMIGTVYSLITPEDLPHLIDANLVLGRK 380
>gi|308455115|ref|XP_003090126.1| hypothetical protein CRE_07115 [Caenorhabditis remanei]
gi|308266427|gb|EFP10380.1| hypothetical protein CRE_07115 [Caenorhabditis remanei]
Length = 510
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 108/176 (61%), Gaps = 11/176 (6%)
Query: 71 VINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKPVLADDSMK 130
VIN +FP KAKLFVHRVGR ARAGRSG A SL+++DEL Y DL +FLG+ A DS
Sbjct: 19 VINLHFPSKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGKPINFASDS-- 76
Query: 131 GKIRHQDGMFGKIPQGLMEDQISEIMNWV-ELDADMEGIQKTCNNAYKKYVKSRPGASVE 189
+ + + + G++P ++ + +E N + + + +M +++ NA KY ++R S E
Sbjct: 77 SEYKEDETLIGRVPDSIVSLE-TEFFNSIHDNNEEMLDLRQKATNAMMKYTRTRQPPSAE 135
Query: 190 SVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGKAR 241
S ++VK+ ++ T V HP + G +++ ++L ++S+Y+ +T+ E K++
Sbjct: 136 SARRVKQ-DIRTDSVECAPHPFLKAEG--DKQSHDILNRISQYKSRNTIFEMNKSQ 188
>gi|50305787|ref|XP_452854.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660562|sp|Q6CT85.1|RRP3_KLULA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49641987|emb|CAH01705.1| KLLA0C14608p [Kluyveromyces lactis]
Length = 487
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAAR
Sbjct: 310 TIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAAR 369
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 370 GLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK 429
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAAR
Sbjct: 309 TIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDVAAR 368
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 369 GLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRSGKSVSLVSQYDLELILRIEEVLGKK 428
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + E + + L S+T ++ DL+ R F+ G+ +LV TDVAAR
Sbjct: 309 TIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAAR 368
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 369 GLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK 428
>gi|449018080|dbj|BAM81482.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 854
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 17/230 (7%)
Query: 3 VVFTATKYHVEYVHKILGL-AGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VF ATK+H Y H++L I+ +D RK +F+ + L VTDVAAR
Sbjct: 286 LVFFATKHHAAYAHRLLSRYENWPVACIHGGMDQICRKRTLEEFRKKEQVSLFVTDVAAR 345
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+D+P LD VIN++FP KLFVHR GR R GR G +SLVS+DE+ Y LD+ LF
Sbjct: 346 GLDLPQLDVVINFHFPPSPKLFVHRCGRVGRRGRKGWCWSLVSTDEVPYMLDVWLFANDG 405
Query: 122 PVLA----------DDSMKGKIRH-QDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQ 169
A D +G +R + G++ + + I+E + E+ DA+++ +
Sbjct: 406 KSFAFRESSEECPVDVGNRGYVRDLRSQNVGRVSSAICQS-IAERIQRAEMEDAELQSLH 464
Query: 170 KTCNNAYKKYVKSRPGASVESVKKVKELE---LATMQVHPLFRNIGSAEQ 216
++C AY Y ++R AS SV + + L + + +HP+F + + E+
Sbjct: 465 QSCVRAYDLYRRTRIKASGSSVVRARHLRNEYWSHVSIHPIFSSATAQEE 514
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + E + + L S+T ++ DL+ R F+ G+ +LV TDVAARG
Sbjct: 349 IVFTRTKANAERIATLCNLLEFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARG 408
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LGRK
Sbjct: 409 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGRK 467
>gi|85816749|gb|EAQ37935.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 425
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L AGI+S I+ + AR A F++GKIRVLV TD+AARG
Sbjct: 247 LVFTRTKHGANRLSQKLDKAGITSAAIHGNKTQNARVKALAGFKSGKIRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L VINY P + +VHR+GR RAG SG A SLV DE+ Y + LG K
Sbjct: 307 LDIPLLPYVINYELPNVPEDYVHRIGRTGRAGASGQAISLVGVDEVAYVRGIEKLLGEKL 366
Query: 122 ---------PV-----LADDSMKGKIRHQDG 138
P L ++ + K RHQ G
Sbjct: 367 HSEVLEGFQPTDTLEQLKKEAAENKARHQQG 397
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + E + + L S+T ++ DL+ R + F+ G+ +LV TDVAARG
Sbjct: 330 IVFTRTKANAERITTLANLLEFSATALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARG 389
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 390 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK 448
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 327 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 386
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LGRK
Sbjct: 387 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGRK 445
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R + F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + E + + L ++T ++ DL+ R F+ G+ +LV TDVAAR
Sbjct: 324 TIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFKAGRRSILVATDVAAR 383
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 384 GLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + E + + L ++T ++ DL+ R F+ G+ +LV TDVAAR
Sbjct: 325 TIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFKAGRKSILVATDVAAR 384
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 GLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 444
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R + F+ GK +LV TDVAARG
Sbjct: 367 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARG 426
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 427 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 485
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + E + + L SST ++ DL+ R F+ GK ++LV DVAARG
Sbjct: 319 IVFTRTKANAERLSALSNLLEFSSTALHGDLNQNQRTGALDLFKAGKRQILVAIDVAARG 378
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 379 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK 437
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + E + + L ++T ++ DL+ R F+ G+ +LV TDVAAR
Sbjct: 327 TIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFKAGRKTILVATDVAAR 386
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 387 GLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 446
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ G+ +LV TDVAARG
Sbjct: 318 IIFTRTKANAERISGLANLLQFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARG 377
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 378 LDIPSVDVVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 436
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 78/120 (65%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT T + + V +L G + ++ L ++R KF++G +LV TDVAAR
Sbjct: 303 TIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDILVATDVAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D V+NY+ P +K +VHRVGR ARAG+SGVA SLV+ +L YL + LG+K
Sbjct: 363 GLDIPSVDVVLNYDLPQDSKTYVHRVGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKK 422
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 317 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARG 376
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 377 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 435
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G S+ ++ L + R + KF++GK +LV TDVAARG
Sbjct: 332 IVFTRTCAHSQRTSLLARILGFSAVPLHGQLSQSQRLGSLNKFKSGKSNILVATDVAARG 391
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAG+SG + SLV+ +L YL + LG+K
Sbjct: 392 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLELYLRIENVLGKK 450
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + +IL AGI S I+ + R+ F++GKI+V+V TD+AARG
Sbjct: 274 LVFSRTKHGADSISRILRKAGIRSEAIHGNKSQGQRQRALGDFKSGKIQVMVATDIAARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L+ VINY+ P A+ +VHR+GR RAGRSG A S S DE D+ GRK
Sbjct: 334 IDINELNMVINYDLPDVAETYVHRIGRTGRAGRSGTALSFCSKDEHVMVKDIQKLTGRK 392
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 78/120 (65%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT T + + V +L G + ++ L ++R KF++G +LV TDVAAR
Sbjct: 303 TIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDILVATDVAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D V+NY+ P +K ++HRVGR ARAG+SGVA SLV+ +L YL + LG+K
Sbjct: 363 GLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKK 422
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 367 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 426
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 427 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 485
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 367 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 426
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 427 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 485
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L ++T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 311 IIFTRTKANAERIAGLANLLEFNATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARG 370
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 371 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 429
>gi|400287158|ref|ZP_10789190.1| DEAD/DEAH box helicase [Psychrobacter sp. PAMC 21119]
Length = 555
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK E + K L AG +++++ DL + R + GKI++LV TDVAARG
Sbjct: 284 IIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKIKILVATDVAARG 343
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP++ VINY+ P + + +VHR+GRC RAGR+G+A SL S D+ + +L RK
Sbjct: 344 LDIPAISHVINYDLPRQTEDYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRK 402
>gi|113971144|ref|YP_734937.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113885828|gb|ABI39880.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 433
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F +GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFMSGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+N++ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 324 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRAILVATDVAARG 383
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 384 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 442
>gi|114048383|ref|YP_738933.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113889825|gb|ABI43876.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 433
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F +GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFMSGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+N++ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>gi|358065451|ref|ZP_09151993.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
gi|356696343|gb|EHI57960.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
Length = 534
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK+ + V K L AGI++ I+ D AR+ F++GK+RVLV TD+AAR
Sbjct: 248 TLVFTRTKHGADQVSKYLTKAGINAAAIHGDKSQGARQTALNNFKSGKLRVLVATDIAAR 307
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDI L VIN++ P ++ +VHR+GR RAG G A S + +E Y D+ +G+
Sbjct: 308 GIDIEELSCVINFDLPNISETYVHRIGRTGRAGLGGRALSFCAIEEKDYVRDIEKLIGKT 367
Query: 122 -PVLAD 126
PV+ D
Sbjct: 368 IPVIED 373
>gi|93006205|ref|YP_580642.1| DEAD/DEAH box helicase [Psychrobacter cryohalolentis K5]
gi|92393883|gb|ABE75158.1| DEAD/DEAH box helicase-like protein [Psychrobacter cryohalolentis
K5]
Length = 552
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK E + K L AG +++++ DL + R + GK+++LV TDVAARG
Sbjct: 282 IIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKVKILVATDVAARG 341
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP++ VINY+ P + + +VHR+GRC RAGR+G+A SL S D+ + +L RK
Sbjct: 342 LDIPAISHVINYDLPRQTEDYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRK 400
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L R + KF++GK +LV TDVAARG
Sbjct: 311 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRLGSLNKFKSGKANILVATDVAARG 370
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+K
Sbjct: 371 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIENALGKK 429
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L ++T ++ DL+ R F+ G+ +LV TDVAARG
Sbjct: 316 IIFTRTKANAERLSALCNLLEFNATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARG 375
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 376 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 434
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T + E + L G SS + L T R KF++GK +L+ TDVAARG
Sbjct: 316 IVFTRTVANSERTAILTRLLGFSSVPLNGQLSQTQRLGALNKFKSGKANILIATDVAARG 375
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAG+SG + SLV+ +L YL + LG+K
Sbjct: 376 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLELYLRIESVLGKK 434
>gi|127511883|ref|YP_001093080.1| DEAD/DEAH box helicase [Shewanella loihica PV-4]
gi|126637178|gb|ABO22821.1| DEAD/DEAH box helicase domain protein [Shewanella loihica PV-4]
Length = 432
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++S+ R+ +F+ GK+R LV T+VAARG
Sbjct: 248 LVFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRALVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L+ V+N++ P A+ +VHR+GR RAGR+GVA SLVS +E D+ +G K
Sbjct: 308 LDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLADIEKLIGNK 366
>gi|24372961|ref|NP_717003.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24347107|gb|AAN54448.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 433
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F +GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+N++ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>gi|392550456|ref|ZP_10297593.1| ATP-dependent RNA helicase [Pseudoalteromonas spongiae
UST010723-006]
Length = 377
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + + K L G+ +T I+ D AR +F+ G++RVLV TDVAARG
Sbjct: 211 LVFTRTKNYADELAKELNKDGLPTTAIHGDKSQGARNKALEQFRAGELRVLVATDVAARG 270
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
IDIPSLD VIN P A+ +VHR+GR RAG++G A SLVS DE L +++LL
Sbjct: 271 IDIPSLDYVINAELPYIAEDYVHRIGRTGRAGKAGTAISLVSLDENWLLEEIEVLL 326
>gi|407068274|ref|ZP_11099112.1| ATP-dependent RNA helicase [Vibrio cyclitrophicus ZF14]
Length = 423
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
IDI L+ V+NY+ P KA+ +VHR+GR RAG SG+A SL+S DE Y L
Sbjct: 315 IDIQQLEQVVNYDLPFKAEDYVHRIGRTGRAGNSGLAISLMSQDE-AYLL 363
>gi|71065641|ref|YP_264368.1| ATP-dependent DEAD/DEAH box RNA-helicase [Psychrobacter arcticus
273-4]
gi|71038626|gb|AAZ18934.1| possible ATP-dependent DEAD/DEAH box RNA-helicase [Psychrobacter
arcticus 273-4]
Length = 567
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F ATK E + K L AG +++++ DL + R + GK ++LV TDVAARG
Sbjct: 288 IIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCKILVATDVAARG 347
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+D+P+L VINY+ P + + +VHR+GRC RAGR+GVA SL S D+ + +L RK
Sbjct: 348 LDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDRPQLNAINRYLDRK 406
>gi|218676562|ref|YP_002395381.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
gi|218324830|emb|CAV26551.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
Length = 423
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
IDI L+ V+NY+ P KA+ +VHR+GR RAG SG+A SL+S DE Y L
Sbjct: 315 IDIQQLEQVVNYDMPFKAEDYVHRIGRTGRAGNSGLAISLMSQDE-AYLL 363
>gi|237746640|ref|ZP_04577120.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
gi|229377991|gb|EEO28082.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
Length = 461
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + V L +AG S+ ++ D+ AR AK + GK+++LV TDVAARG
Sbjct: 272 LVFTATKRDADLVADRLAIAGFSTAALHGDMPQNARNRTLAKLRDGKVKILVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIPS+ V NY+ P + +VHR+GR RAGR G+A SLVS +
Sbjct: 332 IDIPSITHVFNYDLPKFPEDYVHRIGRTGRAGRHGLAISLVSHSD 376
>gi|117921427|ref|YP_870619.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117613759|gb|ABK49213.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 433
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F +GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+N++ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>gi|390953372|ref|YP_006417130.1| DNA/RNA helicase [Aequorivita sublithincola DSM 14238]
gi|390419358|gb|AFL80115.1| DNA/RNA helicase, superfamily II [Aequorivita sublithincola DSM
14238]
Length = 423
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L A I+S I+ + AR + F+ GK+RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANRLSEKLEKAKITSAAIHGNKSQGARTRALSGFKEGKVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP L VIN+ P ++ +VHR+GR RAG SG A SLVS DE+ Y D+ +G +
Sbjct: 307 LDIPLLPHVINFELPNISEDYVHRIGRTGRAGASGEALSLVSLDEVGYLKDIEKLIGERL 366
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
V P+ + + Q +E M V+ D + + QK +++ + +
Sbjct: 367 V--------------------PKTIEDFQPTETMADVKADEEEKKRQKAAHHSRNRNSGN 406
Query: 183 RPGAS 187
R +S
Sbjct: 407 RGNSS 411
>gi|383113927|ref|ZP_09934694.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
gi|313697186|gb|EFS34021.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
Length = 374
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + KILG AGI S I+ + AR++ F++GK RV+V TD+AARG
Sbjct: 248 LVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKSGKTRVMVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG +G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQKLTGKK 366
>gi|160883549|ref|ZP_02064552.1| hypothetical protein BACOVA_01521 [Bacteroides ovatus ATCC 8483]
gi|237722794|ref|ZP_04553275.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371813|ref|ZP_06618223.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|299147643|ref|ZP_07040707.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|336416998|ref|ZP_08597329.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|423291591|ref|ZP_17270438.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
gi|156110962|gb|EDO12707.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229447316|gb|EEO53107.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633265|gb|EFF51836.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|298514430|gb|EFI38315.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|335937042|gb|EGM98952.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|392662714|gb|EIY56270.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
Length = 374
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + KILG AGI S I+ + AR++ F++GK RV+V TD+AARG
Sbjct: 248 LVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKSGKTRVMVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG +G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQKLTGKK 366
>gi|218132094|ref|ZP_03460898.1| hypothetical protein BACEGG_03721 [Bacteroides eggerthii DSM 20697]
gi|217985744|gb|EEC52085.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 392
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + ++LG AGI S I+ + AR+ F++GKIRV++ TD+AARG
Sbjct: 266 LVFSRTKHNADRIVRVLGKAGIGSQAIHGNKSQNARQSALENFKSGKIRVMIATDIAARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG SG A S S +E D+ G+K
Sbjct: 326 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALSFCSQEERKLVNDIQKLTGKK 384
>gi|423298414|ref|ZP_17276472.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
gi|392663326|gb|EIY56877.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
Length = 374
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + KILG AGI S I+ + AR++ F++GK RV+V TD+AARG
Sbjct: 248 LVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKSGKTRVMVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG +G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQKLTGKK 366
>gi|148975453|ref|ZP_01812324.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrionales
bacterium SWAT-3]
gi|145964881|gb|EDK30132.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrionales
bacterium SWAT-3]
Length = 423
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
IDI L+ V+NY+ P KA+ +VHR+GR RAG SG+A SL+S DE Y L
Sbjct: 315 IDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGNSGLAISLMSHDE-AYLL 363
>gi|417948797|ref|ZP_12591939.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
gi|342809160|gb|EGU44284.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
Length = 423
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+NY+ P KA+ +VHR+GR RAG SG+A SL+S DE
Sbjct: 315 IDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGNSGLAISLMSHDE 359
>gi|294139619|ref|YP_003555597.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293326088|dbj|BAJ00819.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 435
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI+S+ ++ + R+ +F+ GK+R LV T+VAARG
Sbjct: 248 LVFTATRDAADKLVKELNLDGITSSVVHGEKAQGTRRRALREFKEGKVRALVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA SLVS +E D+ +G+K
Sbjct: 308 LDIQDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISLVSREEERTLYDIETLIGKK 366
>gi|317477122|ref|ZP_07936363.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
gi|316906665|gb|EFV28378.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
Length = 392
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + ++LG AGI S I+ + AR+ F++GKIRV++ TD+AARG
Sbjct: 266 LVFSRTKHNADRIVRVLGKAGIGSQAIHGNKSQNARQSALENFKSGKIRVMIATDIAARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG SG A S S +E D+ G+K
Sbjct: 326 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALSFCSQEERKLVNDIQKLTGKK 384
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T+ H + + + G S+ ++ DL R + KF++G +L+ TDVAARG
Sbjct: 314 IIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARG 373
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
+DIPS+D VINY+ P +K +VHRVGR ARAGRSG + SLV+ +L YL
Sbjct: 374 LDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDLEMYL 423
>gi|84393512|ref|ZP_00992267.1| ATP-dependent RNA helicase [Vibrio splendidus 12B01]
gi|84375865|gb|EAP92757.1| ATP-dependent RNA helicase [Vibrio splendidus 12B01]
Length = 423
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
IDI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE Y L
Sbjct: 315 IDIQQLEQVVNYDMPFKAEDYVHRIGRTGRAGNTGLAISLMSQDE-AYLL 363
>gi|332293596|ref|YP_004432205.1| DEAD/DEAH box helicase domain protein [Krokinobacter sp. 4H-3-7-5]
gi|332171682|gb|AEE20937.1| DEAD/DEAH box helicase domain protein [Krokinobacter sp. 4H-3-7-5]
Length = 427
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L GISS I+ + AR A F++GK+RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANRLSQKLEKDGISSAAIHGNKTQNARVKALAGFKSGKVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L VINY P + +VHR+GR RAG SG A SLV DE+ Y + LG K
Sbjct: 307 LDIPLLPYVINYELPNVPEDYVHRIGRTGRAGASGQAISLVGVDEVDYVRGIEKLLGEKL 366
Query: 122 ---------PV-----LADDSMKGKIRHQDG 138
P + ++ + K RHQ G
Sbjct: 367 HSEVLEGFQPTDTLAQIKKEAAENKARHQQG 397
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 75/118 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R F+ GK +LV TDVAARG
Sbjct: 367 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARG 426
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+
Sbjct: 427 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK 484
>gi|336310719|ref|ZP_08565690.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
gi|335865801|gb|EGM70809.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
Length = 432
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFTATREAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVAGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G++
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQQ 366
>gi|334705407|ref|ZP_08521273.1| DEAD box family ATP-dependent RNA helicase [Aeromonas caviae Ae398]
Length = 431
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ D +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDELVEELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQ 145
V + D + +++ + FGK PQ
Sbjct: 368 RRIMVPGYEVSSRDDLIKQLQERR-RFGKRPQ 398
>gi|410100568|ref|ZP_11295528.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
gi|409215603|gb|EKN08602.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
Length = 428
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V ++L A I + I+ + TAR+ F+ RVL+ TD+AARG
Sbjct: 248 LVFTRTKHGADKVARVLAKANIGAEAIHGNKSQTARQRALTNFKDHTTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+ L VINY P + +VHR+GR RAGRSGVAYS ++E+ Y D+ +G++
Sbjct: 308 IDVDHLSHVINYELPNVPETYVHRIGRTGRAGRSGVAYSFCDAEEVPYLKDIQKLIGKQ 366
>gi|423343393|ref|ZP_17321106.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
gi|409215468|gb|EKN08468.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
Length = 425
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TKY + V ++L +GI + I+ D AR+ + F+ +RVL+ TD+A+RG
Sbjct: 254 LVFTRTKYGADKVARVLNKSGIGAEAIHGDKGQNARQRALSSFKDHTLRVLIATDIASRG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY+ P + +VHR+GR RAGRSG+A+S +E+ Y D+ +G+
Sbjct: 314 IDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKDV 373
Query: 123 VLADDSM 129
+A M
Sbjct: 374 PVAGGHM 380
>gi|424030597|ref|ZP_17770079.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
gi|424039906|ref|ZP_17778182.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-02]
gi|408881745|gb|EKM20608.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
gi|408892448|gb|EKM29945.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-02]
Length = 418
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKEGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE L + ++ LL
Sbjct: 307 LDIQQLEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAIENLL 362
>gi|269963221|ref|ZP_06177555.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio harveyi
1DA3]
gi|269832026|gb|EEZ86151.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio harveyi
1DA3]
Length = 421
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKEGKVRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE L + ++ LL
Sbjct: 311 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAIENLL 366
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G S+ ++ L + R + KF++GK +L+ TDVAARG
Sbjct: 307 IVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARG 366
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAG+SG + SLV+ +L YL + LG K
Sbjct: 367 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLGFK 425
>gi|254443370|ref|ZP_05056846.1| DEAD/DEAH box helicase domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198257678|gb|EDY81986.1| DEAD/DEAH box helicase domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 469
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K L GI++ I+ + +AR+ F+T IRVLV TD+AARG
Sbjct: 246 LVFTRTKHGANRLAKQLDSDGITAAAIHGNKSQSARERALQDFKTNYIRVLVATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L V+N+ P + +VHR+GR RAG+ G A SLV S+E Y +D+ L R+
Sbjct: 306 IDIIDLPHVVNFELPNIPEDYVHRIGRTGRAGKKGKAISLVCSEEEAYLVDIEKVLKREV 365
Query: 123 VLADDSMKGKIRHQ 136
L + S +GKI HQ
Sbjct: 366 PLFELSPRGKIGHQ 379
>gi|424043574|ref|ZP_17781197.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
gi|408888103|gb|EKM26564.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
Length = 417
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKEGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE L + ++ LL
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAIENLL 362
>gi|374812425|ref|ZP_09716162.1| ATP-dependent RNA helicase RhlB [Treponema primitia ZAS-1]
Length = 625
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F TK + E V K L + GI+ +I DL + R + GK R LV TDVAAR
Sbjct: 246 AIIFCNTKKYTEIVAKRLEINGINCEFIMGDLPQSKRLKIIEDVKAGKTRFLVATDVAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DI L VINY+ P +A+ +VHR+GR ARAG+SG A +L S ++ D+ ++G+K
Sbjct: 306 GLDIDDLSMVINYDIPVEAENYVHRIGRTARAGKSGKAITLASEQDVYELPDIERYIGKK 365
Query: 122 --PVLADDSMKGK 132
V+AD+S+ G+
Sbjct: 366 IPSVIADESLYGE 378
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G S+ ++ L + R + KF++GK +L+ TDVAARG
Sbjct: 307 IVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARG 366
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAG+SG + SLV+ +L YL + LG K
Sbjct: 367 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLGFK 425
>gi|374329697|ref|YP_005079881.1| DEAD/DEAH box helicase [Pseudovibrio sp. FO-BEG1]
gi|359342485|gb|AEV35859.1| DEAD/DEAH box helicase domain protein [Pseudovibrio sp. FO-BEG1]
Length = 483
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V L AG+SS I+ + R+ + F+ G+I++LV TD+AARG
Sbjct: 249 IVFTRTKRGADRVSGHLEKAGLSSAAIHGNKSQRNREKSLDGFKNGRIKILVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI + V+NY P + +VHR+GR ARAG+SGVA SL + E Y D+ +GRK
Sbjct: 309 IDIDGVSHVVNYELPNVPEAYVHRIGRTARAGKSGVAVSLCDATEQPYLRDIERLIGRKI 368
Query: 123 VLADDSMKG 131
D G
Sbjct: 369 PSGDSDWDG 377
>gi|350533287|ref|ZP_08912228.1| ATP-dependent RNA helicase [Vibrio rotiferianus DAT722]
Length = 417
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKEGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE L + ++ LL
Sbjct: 307 LDIQQLEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAIENLL 362
>gi|170725457|ref|YP_001759483.1| DEAD/DEAH box helicase [Shewanella woodyi ATCC 51908]
gi|169810804|gb|ACA85388.1| DEAD/DEAH box helicase domain protein [Shewanella woodyi ATCC
51908]
Length = 432
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ + + K L L GI S+ ++ + R+ +F+ GK+RVLV T+VAARG
Sbjct: 248 LIFTATRDAADKLVKELNLDGIPSSVVHGEKAQGNRRRALREFKEGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA SLVS +E D+ +G+K
Sbjct: 308 LDIQDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISLVSREEERTLADIEKLIGKK 366
>gi|218261592|ref|ZP_03476346.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
gi|218223947|gb|EEC96597.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
Length = 419
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TKY + V ++L +GI + I+ D AR+ + F+ +RVL+ TD+A+RG
Sbjct: 248 LVFTRTKYGADKVARVLNKSGIGAEAIHGDKGQNARQRALSSFKDHTLRVLIATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY+ P + +VHR+GR RAGRSG+A+S +E+ Y D+ +G+
Sbjct: 308 IDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKDV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PVAGGHM 374
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TKY + + +IL +GIS+ I+ + AR+ F++ IRVL+ TD+AARG
Sbjct: 245 LVFTRTKYGADKLARILSKSGISAEAIHGNKSQNARQRALTGFKSHTIRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG G A S S+EL Y D+ +G+
Sbjct: 305 IDVEQLSHVINYELPNVPETYVHRIGRTGRAGHEGTALSFCESEELPYLKDIQKLIGKTI 364
Query: 122 PVL 124
PV+
Sbjct: 365 PVI 367
>gi|388602126|ref|ZP_10160522.1| ATP-dependent RNA helicase [Vibrio campbellii DS40M4]
Length = 417
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKAGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 351
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T+ H + + + G S+ ++ DL R + KF++G +L+ TDVAARG
Sbjct: 226 IIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARG 285
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
+DIPS+D VINY+ P +K +VHRVGR ARAGRSG + SLV+ +L YL
Sbjct: 286 LDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDLEMYL 335
>gi|444425719|ref|ZP_21221154.1| ATP-dependent RNA helicase [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241063|gb|ELU52593.1| ATP-dependent RNA helicase [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 417
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKAGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 351
>gi|254229148|ref|ZP_04922567.1| Superfamily II DNA and RNA helicases [Vibrio sp. Ex25]
gi|262395499|ref|YP_003287352.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
gi|151938233|gb|EDN57072.1| Superfamily II DNA and RNA helicases [Vibrio sp. Ex25]
gi|262339093|gb|ACY52887.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
Length = 419
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE L + ++ LL
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAIENLL 362
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L R + KF++ K +LV TDVAARG
Sbjct: 314 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRLGSLNKFKSSKANILVATDVAARG 373
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+K
Sbjct: 374 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIENALGKK 432
>gi|153839935|ref|ZP_01992602.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ3810]
gi|260901625|ref|ZP_05910020.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ4037]
gi|417322480|ref|ZP_12109014.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus 10329]
gi|149746542|gb|EDM57530.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ3810]
gi|308108886|gb|EFO46426.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ4037]
gi|328470634|gb|EGF41545.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus 10329]
Length = 417
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSQDE 351
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L + R + KF++ + +LV TDVAARG
Sbjct: 366 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARG 425
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+K
Sbjct: 426 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGKK 484
>gi|254473978|ref|ZP_05087371.1| dead/deah box helicase domain protein [Pseudovibrio sp. JE062]
gi|211956867|gb|EEA92074.1| dead/deah box helicase domain protein [Pseudovibrio sp. JE062]
Length = 483
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V L AG+SS I+ + R+ + F+ G+I++LV TD+AARG
Sbjct: 249 IVFTRTKRGADRVSGHLEKAGLSSAAIHGNKSQRNREKSLDGFKNGRIKILVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI + V+NY P + +VHR+GR ARAG+SGVA SL + E Y D+ +GRK
Sbjct: 309 IDIDGVSHVVNYELPNVPEAYVHRIGRTARAGKSGVAVSLCDATEQPYLRDIERLIGRKI 368
Query: 123 VLADDSMKG 131
D G
Sbjct: 369 PSGDSDWDG 377
>gi|433659959|ref|YP_007300818.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus BB22OP]
gi|432511346|gb|AGB12163.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus BB22OP]
Length = 417
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 71/105 (67%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI +L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQALEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 351
>gi|146292298|ref|YP_001182722.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|386312973|ref|YP_006009138.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|145563988|gb|ABP74923.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
gi|319425598|gb|ADV53672.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 433
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F G +RVLV T+VAARG
Sbjct: 248 LVFTATREAADTLVKELNLDGIPSEVVHGEKGQGSRRRALREFVAGDVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQK 366
>gi|163751537|ref|ZP_02158759.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161328545|gb|EDP99698.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 444
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ + + K L L GI+S+ ++ + R+ +F+ GK+R LV T+VAARG
Sbjct: 257 LIFTATRDAADKLVKELNLDGITSSVVHGEKAQGNRRRALREFKEGKVRALVATEVAARG 316
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA SLVS +E D+ +G+K
Sbjct: 317 LDIQDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISLVSREEERTLYDIETLIGKK 375
>gi|418024095|ref|ZP_12663079.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|353536968|gb|EHC06526.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 433
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ D +R+ +F G +RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGDKGQGSRRRALREFVAGDVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G++
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQQ 366
>gi|373950432|ref|ZP_09610393.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386323730|ref|YP_006019847.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333817875|gb|AEG10541.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373887032|gb|EHQ15924.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 433
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ D +R+ +F G +RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGDKGQGSRRRALREFVAGDVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G++
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQQ 366
>gi|126175289|ref|YP_001051438.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|153001611|ref|YP_001367292.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|160876347|ref|YP_001555663.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|217972460|ref|YP_002357211.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|378709548|ref|YP_005274442.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|386342041|ref|YP_006038407.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|125998494|gb|ABN62569.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
gi|151366229|gb|ABS09229.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
gi|160861869|gb|ABX50403.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|217497595|gb|ACK45788.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
gi|315268537|gb|ADT95390.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|334864442|gb|AEH14913.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 433
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ D +R+ +F G +RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGDKGQGSRRRALREFVAGDVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G++
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQQ 366
>gi|120599766|ref|YP_964340.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120559859|gb|ABM25786.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 433
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F G +RVLV T+VAARG
Sbjct: 248 LVFTATREAADTLVKELNLDGIPSEVVHGEKGQGSRRRALREFVAGDVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPSL+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G+K
Sbjct: 308 LDIPSLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQK 366
>gi|375357970|ref|YP_005110742.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|301162651|emb|CBW22198.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
Length = 427
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + ++L AGI + I+ + AR+ F+ +R L+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG GVA S S+EL Y D+ +G+K
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKDIQKLIGKKI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|91228876|ref|ZP_01262779.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
alginolyticus 12G01]
gi|91187564|gb|EAS73893.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
alginolyticus 12G01]
Length = 419
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 351
>gi|269968866|ref|ZP_06182847.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
alginolyticus 40B]
gi|269826516|gb|EEZ80869.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
alginolyticus 40B]
Length = 421
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 311 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 355
>gi|260365571|ref|ZP_05778108.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
K5030]
gi|260877635|ref|ZP_05889990.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AN-5034]
gi|260895944|ref|ZP_05904440.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
Peru-466]
gi|308085216|gb|EFO34911.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
Peru-466]
gi|308090909|gb|EFO40604.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AN-5034]
gi|308114339|gb|EFO51879.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
K5030]
Length = 417
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 351
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T H + + + G S+ ++ L R + KF+ GK +L+ TDVAARG
Sbjct: 308 IIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGKANILIATDVAARG 367
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAG+SG + SL++ +L YL + LG+K
Sbjct: 368 LDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDLEMYLRIESVLGKK 426
>gi|423197250|ref|ZP_17183833.1| hypothetical protein HMPREF1171_01865 [Aeromonas hydrophila SSU]
gi|404631497|gb|EKB28130.1| hypothetical protein HMPREF1171_01865 [Aeromonas hydrophila SSU]
Length = 431
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ D +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDELVEELNLDGIKSAVVHGDKAQGSRRRALREFSEGKLRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP+L+ V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 308 LDIPNLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQ 145
V + D + +++ + FGK PQ
Sbjct: 368 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ 398
>gi|28900700|ref|NP_800355.1| DEAD-box ATP dependent DNA helicase [Vibrio parahaemolyticus RIMD
2210633]
gi|28809080|dbj|BAC62188.1| ATP-dependent RNA helicase, DEAD box family [Vibrio
parahaemolyticus RIMD 2210633]
Length = 421
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 311 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDE 355
>gi|381166173|ref|ZP_09875390.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Phaeospirillum molischianum DSM 120]
gi|380684620|emb|CCG40202.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Phaeospirillum molischianum DSM 120]
Length = 432
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V ++L AGIS+ I+ + AR+ A F+ GKI+ LV TD+AARG
Sbjct: 249 LVFTRTKHGANRVAEMLDKAGISADAIHGNKSQGARQKALADFRDGKIKALVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCY 110
ID+ + V+NY P + + +VHR+GR ARAG SG+A SL +DE+ Y
Sbjct: 309 IDVDGITHVLNYELPNEPESYVHRIGRTARAGASGIAVSLCDADEVAY 356
>gi|375263173|ref|YP_005025403.1| ATP-dependent RNA helicase [Vibrio sp. EJY3]
gi|369843600|gb|AEX24428.1| ATP-dependent RNA helicase [Vibrio sp. EJY3]
Length = 417
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ VIN++ P KA+ +VHR+GR RAG SG+A SL+S DE L + ++ LL
Sbjct: 307 LDIQELEQVINFDMPFKAEDYVHRIGRTGRAGNSGLAVSLMSRDEEYLLHAIENLL 362
>gi|68473005|ref|XP_719308.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|46441121|gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|238880344|gb|EEQ43982.1| ATP-dependent rRNA helicase RRP3 [Candida albicans WO-1]
Length = 399
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L + R + KF++ + +LV TDVAARG
Sbjct: 226 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARG 285
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+K
Sbjct: 286 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGKK 344
>gi|163786067|ref|ZP_02180515.1| putative ATP-dependent RNA helicase RhlE [Flavobacteriales
bacterium ALC-1]
gi|159877927|gb|EDP71983.1| putative ATP-dependent RNA helicase RhlE [Flavobacteriales
bacterium ALC-1]
Length = 436
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K + AGI++ I+ + AR A F++GK+RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANKLCKKMISAGITAAAIHGNKSQGARTKALAGFKSGKVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCY 110
+DIP L V+NY P ++ +VHR+GR RAG SG A SLVS+DE Y
Sbjct: 307 LDIPLLPHVVNYEIPNISEDYVHRIGRTGRAGASGEAISLVSADETTY 354
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T H + + + G S+ ++ L + R + KF++GK +LV TDVAARG
Sbjct: 308 IIFTRTCAHSQRTALLARILGFSAVPLHGQLSQSQRLGSLNKFKSGKANILVATDVAARG 367
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP++D VINY+ P +K ++HRVGR ARAGRSG + SLV+ +L YL + L +K
Sbjct: 368 LDIPAVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLVTQYDLEMYLRIEAVLQKK 426
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L + R + KF++ + +LV TDVAARG
Sbjct: 329 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARG 388
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+K
Sbjct: 389 LDIPSVDIVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIENVLGKK 447
>gi|411008819|ref|ZP_11385148.1| DEAD box family ATP-dependent RNA helicase [Aeromonas aquariorum
AAK1]
Length = 431
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ D +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDELVEELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP+L+ V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 308 LDIPNLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQ 145
V + D + +++ + FGK PQ
Sbjct: 368 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ 398
>gi|336310213|ref|ZP_08565185.1| ATP-dependent RNA helicase RhlE [Shewanella sp. HN-41]
gi|335865943|gb|EGM70934.1| ATP-dependent RNA helicase RhlE [Shewanella sp. HN-41]
Length = 470
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+TG++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKTGQVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLNDIERLINR 364
>gi|146338133|ref|YP_001203181.1| ATP-dependent RNA helicase [Bradyrhizobium sp. ORS 278]
gi|146190939|emb|CAL74944.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 278]
Length = 473
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKGLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDLLLFLG-- 119
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ +DE+ Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGADGVAISLVAGADEMSYLRDIERLTKTT 368
Query: 120 ------RKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE 160
R P D + G+ + Q+G G P G+ + +E N +
Sbjct: 369 LPREDRRTPGQRDAAPAGQHQRQNGHGGGRP-GMQNARSNEGGNAAK 414
>gi|332306494|ref|YP_004434345.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|332173823|gb|AEE23077.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
Length = 436
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F++GK+R LV TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEARGITSAAIHGNKSQGARTKALAEFKSGKVRALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFSLLADIERF 361
>gi|441507538|ref|ZP_20989464.1| putative ATP-dependent RNA helicase [Gordonia aichiensis NBRC
108223]
gi|441448614|dbj|GAC47425.1| putative ATP-dependent RNA helicase [Gordonia aichiensis NBRC
108223]
Length = 544
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+TG+I VLV TDVAAR
Sbjct: 279 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALKKFRTGEIDVLVATDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 339 GIDIDDVTHVINYQCPDDDKTYVHRIGRTGRAGRTGIAITLVDWDELHRWELIDSALKLG 398
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + ++L AGI S I+ + AR+ F+TGKIRV++ TD+AARG
Sbjct: 246 LVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVMIATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG SG A + S +E D+ G+K
Sbjct: 306 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALTFCSQEERKLVSDIQKLTGKK 364
>gi|109898452|ref|YP_661707.1| DEAD/DEAH box helicase [Pseudoalteromonas atlantica T6c]
gi|109700733|gb|ABG40653.1| DEAD/DEAH box helicase-like protein [Pseudoalteromonas atlantica
T6c]
Length = 435
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F++GK+R LV TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEARGITSAAIHGNKSQGARTKALAEFKSGKVRALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFSLLADIERF 361
>gi|410641166|ref|ZP_11351689.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola chathamensis
S18K6]
gi|410139293|dbj|GAC09876.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola chathamensis
S18K6]
Length = 436
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F++GK+R LV TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEARGITSAAIHGNKSQGARTKALAEFKSGKVRALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFSLLADIERF 361
>gi|359407094|ref|ZP_09199729.1| DEAD/DEAH box helicase [Prevotella stercorea DSM 18206]
gi|357553742|gb|EHJ35483.1| DEAD/DEAH box helicase [Prevotella stercorea DSM 18206]
Length = 599
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ K V+ +++ L I+S ++SDL+ R KF+TG+I VLV TD+ ARG
Sbjct: 249 IIFSGKKQKVKAINRTLQQMKINSGEMHSDLEQAERDDILYKFKTGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDI + VIN++ P + +VHR+GR ARA R G+A + VS DE+ + + FLGR
Sbjct: 309 IDIDDIAMVINFDVPHDPEDYVHRIGRTARAQRDGIAITFVSEDEISSFKQIEKFLGR 366
>gi|332186948|ref|ZP_08388689.1| DEAD/DEAH box helicase family protein [Sphingomonas sp. S17]
gi|332012958|gb|EGI55022.1| DEAD/DEAH box helicase family protein [Sphingomonas sp. S17]
Length = 459
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VFT TK+ + V K+L GI++ I+ + R+ +F++G+ RVLV TD+AA
Sbjct: 246 LALVFTRTKHGADRVVKLLAGNGIAANAIHGNKSQGQRERALGEFRSGQTRVLVATDIAA 305
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
RGIDIP + V N+ P A+ +VHR+GR ARAGRSG+A + + DE Y D+
Sbjct: 306 RGIDIPGVSHVFNFELPNVAEQYVHRIGRTARAGRSGLAIAFCAEDERPYLKDI 359
>gi|188587881|ref|YP_001922673.1| putative ATP-dependent RNA helicase RhlE [Clostridium botulinum E3
str. Alaska E43]
gi|188498162|gb|ACD51298.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E3 str.
Alaska E43]
Length = 432
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TKY + K L G S I+ + AR++ + F+ GKIRVLV TD+AARG
Sbjct: 249 LVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY+ P + +VHR+GR RAG SGVA S DE D+ +G+
Sbjct: 309 IDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKSSLKDIEKTIGKNI 368
Query: 122 PVLAD 126
PV+ +
Sbjct: 369 PVMKN 373
>gi|374287718|ref|YP_005034803.1| putative ATP-dependent RNA helicase [Bacteriovorax marinus SJ]
gi|301166259|emb|CBW25834.1| putative ATP-dependent RNA helicase [Bacteriovorax marinus SJ]
Length = 431
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TKY + V K L AGI S+ I+S+ AR+ A F+ KI+ LV TD+AARG
Sbjct: 249 IVFTRTKYGADRVCKHLMKAGIESSSIHSNRSQGAREKALAAFRNKKIKALVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P +A+ ++HR+GR ARAG+SGVAY+ E
Sbjct: 309 IDVDGISHVINYDVPLEAESYIHRIGRTARAGKSGVAYTFCDPAE 353
>gi|146329248|ref|YP_001209905.1| ATP-dependent RNA helicase [Dichelobacter nodosus VCS1703A]
gi|146232718|gb|ABQ13696.1| ATP-dependent RNA helicase [Dichelobacter nodosus VCS1703A]
Length = 442
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 73/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK E V L G + +++ DL R +F+ G+I VLV TD+AARG
Sbjct: 247 IVFTATKSTTETVAHHLYENGFQAQFLHGDLQQQKRNRIIERFRNGQINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDIP++ VINY+ P +++ +VHR+GR RAGRSGVA +LVS + + +L R
Sbjct: 307 IDIPAISHVINYDLPRQSEDYVHRIGRSGRAGRSGVALNLVSLTDRAAMAHIERYLKR 364
>gi|326405112|ref|YP_004285194.1| ATP-dependent RNA helicase RhlE [Acidiphilium multivorum AIU301]
gi|325051974|dbj|BAJ82312.1| ATP-dependent RNA helicase RhlE [Acidiphilium multivorum AIU301]
Length = 470
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VFT TK+ + V + L AGI + I+ + R+ +F++G+IRVLV TD+AAR
Sbjct: 248 AIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAAR 307
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
GID+ ++ V+N+ P + +VHR+GR ARAG GVA SLV EL Y D+ +GR
Sbjct: 308 GIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIETLIGR 366
>gi|338980576|ref|ZP_08631842.1| DEAD/DEAH box helicase domain-containing protein [Acidiphilium sp.
PM]
gi|338208516|gb|EGO96369.1| DEAD/DEAH box helicase domain-containing protein [Acidiphilium sp.
PM]
Length = 407
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L AGI + I+ + R+ +F++G+IRVLV TD+AARG
Sbjct: 249 IVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
ID+ ++ V+N+ P + +VHR+GR ARAG GVA SLV EL Y D+ +GR
Sbjct: 309 IDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIETLIGR 366
>gi|163800537|ref|ZP_02194438.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
AND4]
gi|159175980|gb|EDP60774.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
AND4]
Length = 416
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELVKELKLDGIKAVSINGDKSQGARQRALDDFKEGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI +L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S DE
Sbjct: 307 LDIQALEQVVNFDLPFKAEDYVHRIGRTGRAGKSGLAVSLMSHDE 351
>gi|377563687|ref|ZP_09793026.1| putative ATP-dependent RNA helicase [Gordonia sputi NBRC 100414]
gi|377529134|dbj|GAB38191.1| putative ATP-dependent RNA helicase [Gordonia sputi NBRC 100414]
Length = 538
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+TG+I VLV TDVAAR
Sbjct: 279 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALKKFRTGEIDVLVATDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 339 GIDIDDVTHVINYQCPDDDKTYVHRIGRTGRAGRTGIAITLVDWDELHRWELIDSALKLG 398
>gi|212558407|gb|ACJ30861.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 432
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI + ++ + +R+ +F+ GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADKLEKELNLDGIPTAVVHGEKAQGSRRRALREFKEGKMRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G+K
Sbjct: 308 LDIQDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>gi|251780900|ref|ZP_04823820.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243085215|gb|EES51105.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 432
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TKY + K L G S I+ + AR++ + F+ GKIRVLV TD+AARG
Sbjct: 249 LVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY+ P + +VHR+GR RAG SGVA S DE D+ +G+
Sbjct: 309 IDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKSALKDIEKTIGKNI 368
Query: 122 PVLAD 126
PV+ +
Sbjct: 369 PVMKN 373
>gi|187934290|ref|YP_001887690.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
gi|187722443|gb|ACD23664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TKY + K L G S I+ + AR++ + F+ GKIRVLV TD+AARG
Sbjct: 249 LVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY+ P + +VHR+GR RAG SGVA S DE D+ +G+
Sbjct: 309 IDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKSALKDIEKTIGKNI 368
Query: 122 PVLAD 126
PV+ +
Sbjct: 369 PVMKN 373
>gi|410646395|ref|ZP_11356846.1| cold-shock DEAD box protein A homolog [Glaciecola agarilytica NO2]
gi|410134001|dbj|GAC05245.1| cold-shock DEAD box protein A homolog [Glaciecola agarilytica NO2]
Length = 436
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F+ GK+R LV TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEARGITSAAIHGNKSQGARTKALAEFKNGKVRALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFSLLADIERF 361
>gi|395490699|ref|ZP_10422278.1| DEAD/DEAH box helicase [Sphingomonas sp. PAMC 26617]
Length = 485
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 73/120 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K+LG GI + I+ + R+ +F+TGK++VLV TD+AARG
Sbjct: 253 LVFTRTKHGADRVVKLLGANGIPANAIHGNKSQPQRERALGEFKTGKVKVLVATDIAARG 312
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ + V N+ P A+ +VHR+GR ARAG SG+A S + DE Y D+ KP
Sbjct: 313 IDVSGVSHVFNFELPNVAEQYVHRIGRTARAGASGIAISFCADDERSYLRDIEKLTRVKP 372
>gi|325284979|ref|YP_004260769.1| DEAD/DEAH box helicase [Cellulophaga lytica DSM 7489]
gi|324320433|gb|ADY27898.1| DEAD/DEAH box helicase domain protein [Cellulophaga lytica DSM
7489]
Length = 429
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K + GIS+ I+ + AR F+ G +RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANNLCKKMSSKGISAAAIHGNKSQGARTKALDGFKKGTLRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
+DIP L VINY P ++ +VHR+GR RAG SG A SLVS+DE Y D+ +G
Sbjct: 307 LDIPLLPHVINYEIPNISEDYVHRIGRTGRAGASGEAVSLVSADETTYLKDIQKLIG 363
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 76/124 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG +G+A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGMALTFCSQEERKQINDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NRAD 371
>gi|149371676|ref|ZP_01891092.1| RNA helicase [unidentified eubacterium SCB49]
gi|149355303|gb|EDM43863.1| RNA helicase [unidentified eubacterium SCB49]
Length = 419
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 71/119 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + LG A + S I+ + AR A F+ G IRVLV TD+AARG
Sbjct: 247 LIFTRTKHGANRLAEKLGKADVKSAAIHGNKSQGARTKALAGFKDGSIRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L VINY P + +VHR+GR ARAG SG A S+VS DE Y + LG K
Sbjct: 307 LDIPLLPHVINYELPNIPEDYVHRIGRTARAGASGDAISIVSVDEFEYVKGIEKLLGEK 365
>gi|119773945|ref|YP_926685.1| DEAD/DEAH box helicase [Shewanella amazonensis SB2B]
gi|119766445|gb|ABL99015.1| DEAD/DEAH box helicase domain protein [Shewanella amazonensis SB2B]
Length = 432
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+AT+ E + + L L GI S I+S+ R+ F GKIRVLV T+VAARG
Sbjct: 248 LVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVSTEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L+ V+N++ P + +VHRVGR RAG+SGVA S VS +E D+ +G++
Sbjct: 308 LDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIEKLIGQR 366
>gi|254480404|ref|ZP_05093651.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
gi|214038987|gb|EEB79647.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
Length = 429
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 71/117 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + LG GI+S I+ + AR A F+ G +RVLV TD+AARG
Sbjct: 248 LVFTRTKHGANKLSEQLGKDGITSAAIHGNKSQGARTKALANFKQGSVRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L V+N+ P A+ +VHR+GR ARAG+ G A SLV DEL D+ LG
Sbjct: 308 IDIDKLPHVVNFELPNVAEDYVHRIGRTARAGQEGHAVSLVCVDELKLLSDIEKLLG 364
>gi|119945503|ref|YP_943183.1| ATP-dependent RNA helicase [Psychromonas ingrahamii 37]
gi|119864107|gb|ABM03584.1| ATP-dependent RNA helicase, DEAD box family protein [Psychromonas
ingrahamii 37]
Length = 433
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 71/119 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + K L L GI + + D AR KF G +RVLV TDVAARG
Sbjct: 250 LVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVLVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L V+N++ P A+ ++HR+GR ARAG+SG A SLVS + + ++ +GRK
Sbjct: 310 LDIPDLPYVVNFHLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDNIETLIGRK 368
>gi|451973073|ref|ZP_21926271.1| Superfamily II DNA and RNA helicase [Vibrio alginolyticus E0666]
gi|451931037|gb|EMD78733.1| Superfamily II DNA and RNA helicase [Vibrio alginolyticus E0666]
Length = 419
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 247 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+SG+A SL+S +E L + ++ LL
Sbjct: 307 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSREEEYLLHAIENLL 362
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 76/124 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG +G+A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGMALTFCSQEERKQINDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NRAD 371
>gi|157374161|ref|YP_001472761.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157316535|gb|ABV35633.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 435
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI+S ++ + R+ +F+ GK+R LV T+VAARG
Sbjct: 248 LVFTATRDAADKLVKELNLDGITSAVVHGEKAQGNRRRALREFKEGKVRALVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA SLVS +E D+ +G++
Sbjct: 308 LDIQDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISLVSREEERTLADIEKLIGKQ 366
>gi|261880679|ref|ZP_06007106.1| ATP-dependent RNA helicase DeaD [Prevotella bergensis DSM 17361]
gi|270332631|gb|EFA43417.1| ATP-dependent RNA helicase DeaD [Prevotella bergensis DSM 17361]
Length = 560
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 78/119 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ +++ L I+S ++SDLD + R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQINQALAQLKINSGEMHSDLDQSQRDDIMYKFKSGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P ++ +VHR+GR ARA R GVA +LV+ D++ + + FL ++
Sbjct: 309 IDIDDIAMVINYDVPRDSEDYVHRIGRTARADRDGVAITLVNEDDMFAFHKIEQFLDKE 367
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L G + ++ L+ TAR KF+TG +LV TDVAARG
Sbjct: 296 MIFTRTVAETQRLAILLRSLGFGAIPLHGQLNQTARLGALNKFRTGTRSILVATDVAARG 355
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+D+P++D V+N++ P +K F+HR+GR ARAG+SG+A SLV+ +L +L + LG+K
Sbjct: 356 LDVPAVDVVVNHDLPQDSKTFIHRIGRTARAGKSGIALSLVTQYDLEIFLRIEAALGKKL 415
Query: 122 ---PVLADDSM 129
P D+ M
Sbjct: 416 DEYPTQKDEVM 426
>gi|336409261|ref|ZP_08589748.1| hypothetical protein HMPREF1018_01764 [Bacteroides sp. 2_1_56FAA]
gi|335947029|gb|EGN08824.1| hypothetical protein HMPREF1018_01764 [Bacteroides sp. 2_1_56FAA]
Length = 238
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + ++L AGI + I+ + AR+ F+ +R L+ TD+AARG
Sbjct: 15 LIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARG 74
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG GVA S S+EL Y D+ +G+
Sbjct: 75 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKDIQKLIGKNI 134
Query: 122 PVLAD 126
PV+ D
Sbjct: 135 PVVKD 139
>gi|148261622|ref|YP_001235749.1| DEAD/DEAH box helicase [Acidiphilium cryptum JF-5]
gi|146403303|gb|ABQ31830.1| DEAD/DEAH box helicase domain protein [Acidiphilium cryptum JF-5]
Length = 525
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VFT TK+ + V + L AGI + I+ + R+ +F++G+IRVLV TD+AAR
Sbjct: 303 AIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
GID+ ++ V+N+ P + +VHR+GR ARAG GVA SLV EL Y D+ +GR
Sbjct: 363 GIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIETLIGR 421
>gi|226942043|ref|YP_002797117.1| RhlE3 [Laribacter hongkongensis HLHK9]
gi|226716970|gb|ACO76108.1| RhlE3 [Laribacter hongkongensis HLHK9]
Length = 582
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + ++L GI + I+ + AR ++F+ G +RVLV TD+AARG
Sbjct: 252 LVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDGSLRVLVATDIAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDI L V+NY P + +VHR+GR RAG G A SLV DEL D+ F+GR
Sbjct: 312 IDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDELKLLADIEAFIGR 369
>gi|367474852|ref|ZP_09474344.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 285]
gi|365272847|emb|CCD86812.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 285]
Length = 469
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKSLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDLLLFLG-- 119
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ +DEL Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGAEGVAISLVAGADELSYLRDIERLTKVT 368
Query: 120 ------RKPVLADDSMKGKIRHQDGMFG 141
R P L + + K H+ G G
Sbjct: 369 LPREDRRTPGLREAAPPAKPPHRGGRPG 396
>gi|187927918|ref|YP_001898405.1| DEAD/DEAH box helicase [Ralstonia pickettii 12J]
gi|309781089|ref|ZP_07675827.1| ATP-dependent RNA helicase RhlE [Ralstonia sp. 5_7_47FAA]
gi|404393998|ref|ZP_10985802.1| hypothetical protein HMPREF0989_02676 [Ralstonia sp. 5_2_56FAA]
gi|187724808|gb|ACD25973.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12J]
gi|308920155|gb|EFP65814.1| ATP-dependent RNA helicase RhlE [Ralstonia sp. 5_7_47FAA]
gi|348614316|gb|EGY63868.1| hypothetical protein HMPREF0989_02676 [Ralstonia sp. 5_2_56FAA]
Length = 627
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 300 IVFTATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 359
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ ++ + + F+ R+
Sbjct: 360 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRR 418
>gi|410627645|ref|ZP_11338382.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola mesophila KMM
241]
gi|410152719|dbj|GAC25151.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola mesophila KMM
241]
Length = 435
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F++GK+R LV TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEARGITSAAIHGNKSQGARTKALAEFKSGKVRALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFPLLADIERF 361
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 249 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG +G A + S +E D+ G+K
Sbjct: 309 IDISELPMVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQKLTGKK 367
>gi|241662507|ref|YP_002980867.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240864534|gb|ACS62195.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 627
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 300 IVFTATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 359
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ ++ + + F+ R+
Sbjct: 360 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRR 418
>gi|289422689|ref|ZP_06424529.1| cold-shock DEAD box protein A [Peptostreptococcus anaerobius 653-L]
gi|289156868|gb|EFD05493.1| cold-shock DEAD box protein A [Peptostreptococcus anaerobius 653-L]
Length = 547
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVFT TK + + L G + ++ DL R I KF+ G I +LV TDVAA
Sbjct: 245 LTVVFTNTKKGADELVSDLQARGYGADSLHGDLKQVQRDIVMDKFRHGTIDILVATDVAA 304
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+ ++ VINY P + +VHR+GR RAGR G+A+S V E+ D+ +
Sbjct: 305 RGIDVDDVECVINYELPQDEEYYVHRIGRTGRAGRDGIAFSFVFGREMRKLKDIERYTKS 364
Query: 121 K------PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE 160
K P + D K KI F I + L E S+ + WVE
Sbjct: 365 KVMKHSIPTVNDVEQK-KIGQ---FFSDIKETLEEGNFSKQLQWVE 406
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG +G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|393720931|ref|ZP_10340858.1| DEAD/DEAH box helicase [Sphingomonas echinoides ATCC 14820]
Length = 480
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K+LG GI S I+ + R+ A+F++GK +VLV TD+AARG
Sbjct: 248 LVFTRTKHGADRVVKLLGANGIVSNAIHGNKSQPQRERALAEFKSGKAKVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + V N+ P + +VHR+GR ARAG SG A S V+ DE Y D+
Sbjct: 308 IDVSGVSHVFNFELPNVPEQYVHRIGRTARAGASGTAISFVADDERTYLRDI 359
>gi|429728801|ref|ZP_19263505.1| putative DEAD-box ATP-dependent RNA helicase CshA
[Peptostreptococcus anaerobius VPI 4330]
gi|429147776|gb|EKX90798.1| putative DEAD-box ATP-dependent RNA helicase CshA
[Peptostreptococcus anaerobius VPI 4330]
Length = 547
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVFT TK + + L G + ++ DL R I KF+ G I +LV TDVAA
Sbjct: 245 LTVVFTNTKKGADELVSDLQARGYGADSLHGDLKQVQRDIVMDKFRHGTIDILVATDVAA 304
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+ ++ VINY P + +VHR+GR RAGR G+A+S V E+ D+ +
Sbjct: 305 RGIDVDDVECVINYELPQDEEYYVHRIGRTGRAGRDGIAFSFVFGREMRKLKDIERYTKS 364
Query: 121 K------PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE 160
K P + D K KI F I + L E S+ + WVE
Sbjct: 365 KVMKHSIPTVNDVEQK-KIGQ---FFSDIKETLEEGNFSKQLQWVE 406
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T Y + V +L G + ++ L +AR KF+ G +LV TDVAARG
Sbjct: 294 IVFTRTVYETQRVAILLRTLGFGAIPLHGQLSQSARLGALNKFRGGTREILVATDVAARG 353
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP +D V+NY+ P +K ++HRVGR ARAG+SGVA SLV+ +L + + LG+K
Sbjct: 354 LDIPKVDIVLNYDIPSDSKTYIHRVGRTARAGKSGVAISLVTQYDLELFTRIEAALGKK 412
>gi|154492527|ref|ZP_02032153.1| hypothetical protein PARMER_02161 [Parabacteroides merdae ATCC
43184]
gi|154087752|gb|EDN86797.1| DEAD/DEAH box helicase [Parabacteroides merdae ATCC 43184]
Length = 419
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V ++L +GI + I+ + +AR+ + F+ +RVL+ TD+A+RG
Sbjct: 248 LVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLIATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY+ P + +VHR+GR RAGRSG+A+S +E+ Y D+ +G++
Sbjct: 308 IDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PVAGGHM 374
>gi|423722013|ref|ZP_17696189.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
gi|409242715|gb|EKN35475.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
Length = 426
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V ++L +GI + I+ + +AR+ + F+ +RVL+ TD+A+RG
Sbjct: 255 LVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLIATDIASRG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY+ P + +VHR+GR RAGRSG+A+S +E+ Y D+ +G++
Sbjct: 315 IDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEV 374
Query: 123 VLADDSM 129
+A M
Sbjct: 375 PVAGGHM 381
>gi|423345822|ref|ZP_17323511.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
gi|409221557|gb|EKN14506.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
Length = 426
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V ++L +GI + I+ + +AR+ + F+ +RVL+ TD+A+RG
Sbjct: 255 LVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLIATDIASRG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY+ P + +VHR+GR RAGRSG+A+S +E+ Y D+ +G++
Sbjct: 315 IDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEV 374
Query: 123 VLADDSM 129
+A M
Sbjct: 375 PVAGGHM 381
>gi|53712950|ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60681162|ref|YP_211306.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763047|ref|ZP_06091615.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|383117799|ref|ZP_09938542.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|423249596|ref|ZP_17230612.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|423256091|ref|ZP_17237019.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|423258064|ref|ZP_17238987.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|423264968|ref|ZP_17243971.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|423268460|ref|ZP_17247432.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|423273980|ref|ZP_17252927.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|423285051|ref|ZP_17263934.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
gi|52215815|dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60492596|emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251946848|gb|EES87130.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|263255655|gb|EEZ27001.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|387777510|gb|EIK39607.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|392649282|gb|EIY42960.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|392655681|gb|EIY49323.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|392703744|gb|EIY96885.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|392704701|gb|EIY97836.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|392707413|gb|EIZ00532.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|404579640|gb|EKA84354.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
Length = 427
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + ++L AGI + I+ + AR+ F+ +R L+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG GVA S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKDIQKLIGKNI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|357384319|ref|YP_004899043.1| ATP-dependent RNA helicase RhlE [Pelagibacterium halotolerans B2]
gi|351592956|gb|AEQ51293.1| ATP-dependent RNA helicase RhlE [Pelagibacterium halotolerans B2]
Length = 473
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++VF TK+ E + K L AG ++ I+ + R F+ G+IRVLV TDVAA
Sbjct: 290 LSLVFARTKHGAEKLSKTLAAAGFATGSIHGNKSQGQRDRTLKAFREGEIRVLVATDVAA 349
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL-- 118
RGIDIP + V NY P A+ +VHR+GR ARAG G A +LVS +E LD+
Sbjct: 350 RGIDIPGVSHVYNYELPQVAENYVHRIGRTARAGADGEAVALVSGEEYGLLLDIERLTGL 409
Query: 119 ------GRKPVLADDSMKGKIRHQDGMFGKIPQ 145
G +P+ S K R Q G GK PQ
Sbjct: 410 SIATAGGERPLRKSPSSPAKKRSQ-GRGGK-PQ 440
>gi|120597666|ref|YP_962240.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120557759|gb|ABM23686.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 550
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G++RVLV TD+AARG
Sbjct: 258 LVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVLVATDIAARG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E+ D+ + R
Sbjct: 318 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLNDIERLINR 375
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF+ G+ +L+ TDVA+R
Sbjct: 251 SMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNILICTDVASR 310
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 311 GLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKK 370
>gi|146294196|ref|YP_001184620.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|145565886|gb|ABP76821.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
Length = 550
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G++RVLV TD+AARG
Sbjct: 258 LVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVLVATDIAARG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E+ D+ + R
Sbjct: 318 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLNDIERLINR 375
>gi|17545671|ref|NP_519073.1| ATP-dependent RNA helicase [Ralstonia solanacearum GMI1000]
gi|17427964|emb|CAD14654.1| putative atp-dependent rna helicase protein [Ralstonia solanacearum
GMI1000]
Length = 608
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 297 IVFTATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 356
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 357 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 415
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI S I+ + R++ F+ G IRVLV TD+AARG
Sbjct: 248 IVFSRTKHGANKIAKDLEKAGIQSAAIHGNKSQNQRQLALNNFKEGNIRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINY+ P A+ +VHR+GR RAG SGVA + +E + + +G+
Sbjct: 308 IDIDELSHVINYDLPDVAETYVHRIGRTGRAGASGVAITFCDEEEKAMFRSIEKIIGKSI 367
Query: 122 PVLADD 127
PVL ++
Sbjct: 368 PVLEEE 373
>gi|386002133|ref|YP_005920432.1| ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210189|gb|AET64809.1| ATP-dependent RNA helicase, putative [Methanosaeta harundinacea
6Ac]
Length = 418
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V K+L +GI + I+ D R F+ G+++VLV TD+AARG
Sbjct: 248 LVFTRTKRRADRVAKVLTRSGIRADAIHGDRTQNQRLAALRGFKAGRLQVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + VINY+ P + + +VHR+GR RAGR+G AYS S++E + D+
Sbjct: 308 IDVEDISHVINYDLPNEPESYVHRIGRTGRAGRAGTAYSFCSAEERSFLRDI 359
>gi|344170690|emb|CCA83116.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal)(rhlE-like) [blood disease
bacterium R229]
Length = 614
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 297 IVFTATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 356
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 357 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 415
>gi|386314915|ref|YP_006011080.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|319427540|gb|ADV55614.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 539
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLNDIERLINR 364
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK + + +L G + ++ DL TAR KF++G +L+ TDVA+RG
Sbjct: 307 IIFARTKSDTQRISLLLRNLGYGAIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRG 366
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP++D VINY+ P +K ++HRVGR ARAGR+G + +LVS +L YL + LG+K
Sbjct: 367 LDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRAGKSVALVSQYDLELYLRIEGALGKK 425
>gi|300692069|ref|YP_003753064.1| bifunctional DEAD/DEAH box helicase/ATP dependent RNA helicase
[Ralstonia solanacearum PSI07]
gi|299079129|emb|CBJ51797.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal) (rhlE-like) [Ralstonia
solanacearum PSI07]
Length = 614
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 297 IVFTATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 356
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 357 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 415
>gi|449525593|ref|XP_004169801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 224
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF+ G+ +L+ TDVA+R
Sbjct: 26 SMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNILICTDVASR 85
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 86 GLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKK 145
>gi|365880479|ref|ZP_09419846.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 375]
gi|365291464|emb|CCD92377.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 375]
Length = 481
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKGLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ SDE+ Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGADGVAISLVAGSDEMSYLRDI 361
>gi|336125600|ref|YP_004577556.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
gi|335343317|gb|AEH34599.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
Length = 421
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKQGSDELAKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+NY+ P KA+ +VHR+GR RAG +G A SL+S DE
Sbjct: 315 IDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGLTGFAVSLMSRDE 359
>gi|383769279|ref|YP_005448342.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium sp. S23321]
gi|381357400|dbj|BAL74230.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium sp. S23321]
Length = 526
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI ++ I+ + R+ A+F++G IR LV TD+AARG
Sbjct: 263 LVFTRTKHGADKVVKALEKAGIPASAIHGNKSQNHRERTLAQFRSGDIRTLVATDIAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL---------- 112
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ E YL
Sbjct: 323 IDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEELAYLRDIERLIKVA 382
Query: 113 ----DLLLFLGRKPVLADDSMKGKIRHQDGMFGKIPQGLM--EDQISEIMNWVELDADME 166
DL GR+ + + + R G G+ PQG E + + E AD
Sbjct: 383 LPREDLRTDAGRRDAGPPPAQQRQGR-PSGRPGQRPQGARHGEGRHGDGRRTDERHADGR 441
Query: 167 ----GIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQ 203
G Q ++ RPG++ ++ K + M
Sbjct: 442 RHGAGKQGDGRPGEARHADGRPGSAPKASKGSRRRPAGKMH 482
>gi|299066924|emb|CBJ38119.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal) (rhlE-like) [Ralstonia
solanacearum CMR15]
Length = 613
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 75/121 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAA
Sbjct: 295 QAIVFTATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R
Sbjct: 355 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDR 414
Query: 121 K 121
+
Sbjct: 415 R 415
>gi|111023319|ref|YP_706291.1| cold-shock DEAD-box protein [Rhodococcus jostii RHA1]
gi|110822849|gb|ABG98133.1| probable cold-shock DEAD-box protein [Rhodococcus jostii RHA1]
Length = 555
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL+ AR+ F+TGKI VLV TDVAAR
Sbjct: 293 TMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKAFRTGKIDVLVATDVAAR 352
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 353 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALGLG 412
>gi|84684138|ref|ZP_01012040.1| hypothetical protein 1099457000262_RB2654_16856 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667891|gb|EAQ14359.1| hypothetical protein RB2654_16856 [Rhodobacterales bacterium
HTCC2654]
Length = 439
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++VF TK+ E + K L +G + I+ + R A F+ GK RVLV TDVAA
Sbjct: 248 LSLVFARTKHGAERLMKQLCASGFDAVSIHGNKSQGQRDRALAAFRDGKARVLVATDVAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
RGIDIP + V N++ P A+ +VHR+GR ARAG G A SLV+ DEL Y D+
Sbjct: 308 RGIDIPGVSHVFNFDLPNVAENYVHRIGRTARAGADGDAISLVTGDELGYLRDI 361
>gi|117620037|ref|YP_857223.1| ATP-dependent RNA helicase RhlE [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561444|gb|ABK38392.1| putative ATP-dependent RNA helicase RhlE [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 408
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 10/152 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + L L GI S ++ D +R+ +F GK+RVLV T+VAARG
Sbjct: 225 LVFASTRESCDELVAELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVATEVAARG 284
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L+ V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 285 LDIPDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIEALIGQKI 344
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQ 145
V + D + +++ + FGK PQ
Sbjct: 345 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ 375
>gi|397736750|ref|ZP_10503428.1| cold-shock DEAD box protein A [Rhodococcus sp. JVH1]
gi|396927331|gb|EJI94562.1| cold-shock DEAD box protein A [Rhodococcus sp. JVH1]
Length = 602
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL+ AR+ F+TGKI VLV TDVAAR
Sbjct: 343 TMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKAFRTGKIDVLVATDVAAR 402
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 403 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALGLG 462
>gi|419964790|ref|ZP_14480743.1| cold-shock DEAD-box protein [Rhodococcus opacus M213]
gi|414569902|gb|EKT80642.1| cold-shock DEAD-box protein [Rhodococcus opacus M213]
Length = 544
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL+ AR+ F+TGKI VLV TDVAAR
Sbjct: 293 TMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKAFRTGKIDVLVATDVAAR 352
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 353 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALGLG 412
>gi|380696525|ref|ZP_09861384.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 374
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLINDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NRAD 371
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 75/121 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VFT T H + + + G ++ ++ L R + KF++ +L+ TDVAA
Sbjct: 304 LIIVFTRTVAHAQRTALLCRILGFNAVPLHGQLSQAQRLGSLNKFKSRSANILIATDVAA 363
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG+
Sbjct: 364 RGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGK 423
Query: 121 K 121
K
Sbjct: 424 K 424
>gi|441520555|ref|ZP_21002221.1| putative ATP-dependent RNA helicase [Gordonia sihwensis NBRC
108236]
gi|441459715|dbj|GAC60182.1| putative ATP-dependent RNA helicase [Gordonia sihwensis NBRC
108236]
Length = 536
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+ GKI VLV TDVAAR
Sbjct: 287 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALNKFRDGKIDVLVATDVAAR 346
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GID+ + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 347 GIDVDDVTHVINYQCPDDDKTYVHRIGRTGRAGRTGIAITLVDWDELHRWELIDKALGLG 406
>gi|374572806|ref|ZP_09645902.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. WSM471]
gi|374421127|gb|EHR00660.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. WSM471]
Length = 505
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI ++ I+ + R+ A+F+TG+IR LV TD+AARG
Sbjct: 255 LVFTRTKHGADKVVKTLEKAGIPASAIHGNKSQNHRERTLAQFRTGEIRTLVATDIAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ +EL Y D+
Sbjct: 315 IDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEELSYLRDI 367
>gi|424851819|ref|ZP_18276216.1| LOW QUALITY PROTEIN: DEAD/DEAH box helicase domain-containing
protein, partial [Rhodococcus opacus PD630]
gi|356666484|gb|EHI46555.1| LOW QUALITY PROTEIN: DEAD/DEAH box helicase domain-containing
protein, partial [Rhodococcus opacus PD630]
Length = 526
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL+ AR+ F+TGKI VLV TDVAAR
Sbjct: 343 TMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKAFRTGKIDVLVATDVAAR 402
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 403 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALGLG 462
>gi|432334488|ref|ZP_19586164.1| cold-shock DEAD-box protein [Rhodococcus wratislaviensis IFP 2016]
gi|430778572|gb|ELB93819.1| cold-shock DEAD-box protein [Rhodococcus wratislaviensis IFP 2016]
Length = 544
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL+ AR+ F+TGKI VLV TDVAAR
Sbjct: 293 TMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKAFRTGKIDVLVATDVAAR 352
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 353 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALDLG 412
>gi|209809226|ref|YP_002264764.1| putative ATP-dependent RNA helicase 1 [Aliivibrio salmonicida
LFI1238]
gi|208010788|emb|CAQ81183.1| putative ATP-dependent RNA helicase 1 [Aliivibrio salmonicida
LFI1238]
Length = 418
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR +F+TGKIR L+ TDVAARG
Sbjct: 250 LVFTKTKQGSDDLVKELKLDGIKAASINGDKSQGARIRALEEFKTGKIRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VINY P KA+ +VHR+GR RAG +G A SL+S+DE
Sbjct: 310 LDIEQLECVINYELPFKAEDYVHRIGRTGRAGHTGKAVSLMSADE 354
>gi|148258225|ref|YP_001242810.1| ATP-dependent RNA helicase [Bradyrhizobium sp. BTAi1]
gi|146410398|gb|ABQ38904.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. BTAi1]
Length = 469
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKGLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ +DEL Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGADGVAISLVAGADELSYLRDI 361
>gi|312882439|ref|ZP_07742180.1| ATP-dependent RNA helicase RhlE [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369839|gb|EFP97350.1| ATP-dependent RNA helicase RhlE [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 452
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK+ + + L A I++ I+ + AR ++F+TG+IRVLV TD+AARG
Sbjct: 247 LVFCRTKHGANRLAQFLNKAEITAAAIHGNKSQGARTRALSEFKTGEIRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP L V+N++ P A+ +VHR+GR RAG +G A+SLV +DE
Sbjct: 307 IDIPQLPQVVNFDLPNVAEDYVHRIGRTGRAGEAGKAFSLVEADE 351
>gi|157960747|ref|YP_001500781.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157845747|gb|ABV86246.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 432
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI + ++ + +R+ +F+ GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADKLEKELNLDGIPTAVVHGEKAQGSRRRALREFKEGKMRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G++
Sbjct: 308 LDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQQ 366
>gi|407648142|ref|YP_006811901.1| ATP-dependent RNA helicase [Nocardia brasiliensis ATCC 700358]
gi|407311026|gb|AFU04927.1| ATP-dependent RNA helicase [Nocardia brasiliensis ATCC 700358]
Length = 515
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G S ++ DL AR+ KF+ G I VLV TDVAAR
Sbjct: 272 TMVFTRTKRTAQKVADDLAERGFSVGAVHGDLGQIAREKALTKFRKGAIDVLVATDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+GVA +L+ DEL + +D L LG
Sbjct: 332 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGVAVTLIDWDELARWASIDKALGLG 391
>gi|359765387|ref|ZP_09269216.1| putative ATP-dependent RNA helicase [Gordonia polyisoprenivorans
NBRC 16320]
gi|359317208|dbj|GAB22049.1| putative ATP-dependent RNA helicase [Gordonia polyisoprenivorans
NBRC 16320]
Length = 553
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+TG+I VLV TDVAAR
Sbjct: 297 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALKKFRTGEIDVLVATDVAAR 356
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL +
Sbjct: 357 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW 406
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 263 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ EL +Y+ + +G+K
Sbjct: 323 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 382
>gi|378718867|ref|YP_005283756.1| putative cold-shock DEAD-box protein [Gordonia polyisoprenivorans
VH2]
gi|375753570|gb|AFA74390.1| putative cold-shock DEAD-box protein [Gordonia polyisoprenivorans
VH2]
Length = 553
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+TG+I VLV TDVAAR
Sbjct: 297 TMIFTRTKRAAQKVADDLAERGFSVGAVHGDLGQVAREKALKKFRTGEIDVLVATDVAAR 356
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL +
Sbjct: 357 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW 406
>gi|445118247|ref|ZP_21378972.1| hypothetical protein HMPREF0662_02039 [Prevotella nigrescens F0103]
gi|444839625|gb|ELX66682.1| hypothetical protein HMPREF0662_02039 [Prevotella nigrescens F0103]
Length = 570
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ +RG
Sbjct: 249 IIFSGSKQKVKQIASSLNQKKINCGQMHSDLDQAQRDEMMFKFKSGQIDVLVATDILSRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R GVA +L+S D++ + + FLG++
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARADRDGVAITLISDDDIYNFQQIEKFLGKE 367
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 263 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ EL +Y+ + +G+K
Sbjct: 323 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 382
>gi|340349082|ref|ZP_08672106.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
nigrescens ATCC 33563]
gi|339612648|gb|EGQ17451.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
nigrescens ATCC 33563]
Length = 570
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ +RG
Sbjct: 249 IIFSGSKQKVKQIASSLNQKKINCGQMHSDLDQAQRDEMMFKFKSGQIDVLVATDILSRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R GVA +L+S D++ + + FLG++
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARADRDGVAITLISDDDIYNFQQIEKFLGKE 367
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 263 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ EL +Y+ + +G+K
Sbjct: 323 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 382
>gi|167622911|ref|YP_001673205.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167352933|gb|ABZ75546.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 432
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI + ++ + +R+ +F+ GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADKLEKELNLDGIPTAVVHGEKAQGSRRRALREFKEGKMRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG+SGVA S VS +E D+ +G++
Sbjct: 308 LDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQQ 366
>gi|452964578|gb|EME69615.1| superfamily II DNA/RNA helicase [Magnetospirillum sp. SO-1]
Length = 480
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 72/112 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V ++L AGI++ I+ + AR+ A F+ G+I+ LV TD+AARG
Sbjct: 250 LVFTRTKHGANRVVELLEKAGITADAIHGNKSQGARQKALADFRDGRIKALVATDIAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + VIN+ P + + +VHR+GR ARAG SG+A SL DE+ Y D+
Sbjct: 310 IDVDGITHVINFELPNEPESYVHRIGRTARAGASGIALSLCDGDEVAYLRDI 361
>gi|386400169|ref|ZP_10084947.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. WSM1253]
gi|385740795|gb|EIG60991.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. WSM1253]
Length = 518
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI ++ I+ + R+ A+F+TG+IR LV TD+AARG
Sbjct: 255 LVFTRTKHGADKVVKTLEKAGIPASAIHGNKSQNHRERTLAQFRTGEIRTLVATDIAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ +EL Y D+
Sbjct: 315 IDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEELAYLRDI 367
>gi|444379626|ref|ZP_21178803.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
gi|443676355|gb|ELT83059.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
Length = 410
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T+ E + L L G+++ I+ + AR F+ G +RVLV TDVAARG
Sbjct: 246 LVFAKTRQSTEALANELKLDGLAAEAIHGEKTQGARNRALEGFKNGTVRVLVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DIPSLD V NY P + + ++HR+GR RAG+SG+A SLVS +E
Sbjct: 306 LDIPSLDTVFNYELPHQPEDYIHRIGRTGRAGKSGMAISLVSREE 350
>gi|379710489|ref|YP_005265694.1| putative ATP-dependent RNA helicase (fragment) [Nocardia
cyriacigeorgica GUH-2]
gi|374847988|emb|CCF65060.1| putative ATP-dependent RNA helicase (fragment) [Nocardia
cyriacigeorgica GUH-2]
Length = 607
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ AKF+ G I VLV TDVAAR
Sbjct: 290 TMIFTRTKRTAQKVADDLAERGFAVGAVHGDLGQIAREKALAKFRKGTIDVLVATDVAAR 349
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+GVA +L+ DEL + +D L LG
Sbjct: 350 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGVAVTLIDWDELNRWAGIDKALGLG 409
>gi|393775518|ref|ZP_10363831.1| ATP-dependent RNA helicase [Ralstonia sp. PBA]
gi|392717568|gb|EIZ05129.1| ATP-dependent RNA helicase [Ralstonia sp. PBA]
Length = 586
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D++ AR + G I+VLV TDVAARG
Sbjct: 306 IVFTATKRDADSLAERLADTGFSAGALHGDMNQGARNRMLTALRRGNIQVLVATDVAARG 365
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGR+G+A +LV+ E+ + + F+ R+
Sbjct: 366 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRAGIAINLVNHGEVFQWRRIERFIDRR 424
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT T + + + +L G + ++ L T+R KF++G +LV TDVAAR
Sbjct: 303 TIIFTRTVWETQRISILLRTLGFGAIPLHGQLSQTSRLGALNKFRSGTRDILVATDVAAR 362
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D V+NY+ P +K ++HRVGR ARAG+SG+A S+V+ ++ + + LG+K
Sbjct: 363 GLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISVVTQYDVEIFTRIEAALGKK 422
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 263 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ EL +Y+ + +G+K
Sbjct: 323 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 382
>gi|257091933|ref|YP_003165574.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044457|gb|ACV33645.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 474
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + V L +AG+++ ++ D+ AR A + G++R+LV TDVAARG
Sbjct: 271 LVFTATKRDADTVSDRLNVAGLNAAALHGDMHQGARNRTLAAMRRGQVRILVATDVAARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P A+ +VHR+GR RAGR+G+A SLV E
Sbjct: 331 IDVPTITHVFNYDLPKFAEDYVHRIGRTGRAGRNGLAISLVHHAE 375
>gi|90578695|ref|ZP_01234505.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
gi|90439528|gb|EAS64709.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
Length = 427
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K LGL GI ++ I D AR+ F++GK RVLV TDVAARG
Sbjct: 260 LVFTKTKQGSDQLAKDLGLDGIKASSINGDKSQGARQRALDDFKSGKTRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG +G A +L+S DE
Sbjct: 320 LDIEQLEYVVNFDMPFKAEDYVHRIGRTGRAGMTGHAITLMSLDE 364
>gi|89074254|ref|ZP_01160744.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
gi|89049958|gb|EAR55492.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
Length = 427
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K LGL GI ++ I D AR+ F++GK RVLV TDVAARG
Sbjct: 260 LVFTKTKQGSDQLAKDLGLDGIKASSINGDKSQGARQRALDDFKSGKTRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG +G A +L+S DE
Sbjct: 320 LDIEQLEYVVNFDMPFKAEDYVHRIGRTGRAGMTGHAITLMSLDE 364
>gi|344174090|emb|CCA85871.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal)(rhlE-like) [Ralstonia syzygii
R24]
Length = 658
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 351 IVFTATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARG 410
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 411 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 469
>gi|365538739|ref|ZP_09363914.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
Length = 421
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTKRGSDELAKELKLDGIKAASINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+NY+ P KA+ +VHR+GR RAG +G A SL+S DE
Sbjct: 315 IDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGLTGFAVSLMSRDE 359
>gi|323345624|ref|ZP_08085847.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella oralis
ATCC 33269]
gi|323093738|gb|EFZ36316.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella oralis
ATCC 33269]
Length = 548
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + K L ++ ++SDL+ R KF++G++ V+V TD+ +RG
Sbjct: 249 IIFSGSKQKVKQITKALQQKNVNCGEMHSDLEQAQRDDMMFKFKSGQLDVIVATDIISRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI + VINY+ P A+ +VHR+GR ARA R GVA +L++ D++ Y+ + FLG KP
Sbjct: 309 IDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGVAITLINEDDIYYFQQIEKFLG-KP 367
Query: 123 V 123
V
Sbjct: 368 V 368
>gi|182677108|ref|YP_001831254.1| DEAD/DEAH box helicase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632991|gb|ACB93765.1| DEAD/DEAH box helicase domain protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 484
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V +HK L G S+ ++ D+D AR + F++G + +LV +DVAARG
Sbjct: 248 IIFCNRKRDVAVLHKSLQKHGFSAGALHGDMDQRARMTSLDAFKSGDVNLLVCSDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP + V N++ P A+ +VHR+GR RAGRSGVA S+V+S + Y ++ + RK
Sbjct: 308 LDIPDVSHVFNFDVPTHAEDYVHRIGRTGRAGRSGVALSIVTSADRKYVDEIEKLIARKI 367
Query: 122 ---------PVLADDSMKGKIRHQDGMFGKI 143
V A++S+ + G GKI
Sbjct: 368 DWQGGATLDDVAAEESVAHATETRRGRGGKI 398
>gi|375133487|ref|YP_005049895.1| DEAD/DEAH box helicase [Vibrio furnissii NCTC 11218]
gi|315182662|gb|ADT89575.1| DEAD-box ATP dependent DNA helicase [Vibrio furnissii NCTC 11218]
Length = 406
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + + L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 239 LVFTRTKQGSDALAQELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 298
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+N++ P KA+ +VHR+GR RAG++G A SL+S DE
Sbjct: 299 IDIAQLEQVVNFDMPFKAEDYVHRIGRTGRAGKAGFAVSLMSHDE 343
>gi|313146179|ref|ZP_07808372.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|423279249|ref|ZP_17258162.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
gi|313134946|gb|EFR52306.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404585418|gb|EKA90034.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
Length = 427
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + +IL AGI + I+ + AR+ F+ +R L+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARILTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG GVA S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKDIQKLIGKNI 364
Query: 122 PVLAD 126
PV+ +
Sbjct: 365 PVVKE 369
>gi|88705999|ref|ZP_01103707.1| ATP-dependent RNA helicase RhlE [Congregibacter litoralis KT71]
gi|88699713|gb|EAQ96824.1| ATP-dependent RNA helicase RhlE [Congregibacter litoralis KT71]
Length = 443
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + L GISS I+ + AR A+F++G IR LV TD+AARG
Sbjct: 248 LIFTRTKHGANRLAEQLSKDGISSAAIHGNKSQGARTRALAEFKSGAIRALVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L V+NY P A+ ++HR+GR ARAG+ G A SLV DEL D+ LG
Sbjct: 308 IDIDKLPHVVNYELPNVAEDYIHRIGRTARAGQEGHAISLVCVDELKLLRDIEKLLG 364
>gi|424662680|ref|ZP_18099717.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
gi|404576370|gb|EKA81108.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
Length = 427
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + +IL AGI + I+ + AR+ F+ +R L+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARILTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG GVA S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKDIQKLIGKNI 364
Query: 122 PVLAD 126
PV+ +
Sbjct: 365 PVVKE 369
>gi|237748776|ref|ZP_04579256.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229380138|gb|EEO30229.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 465
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + V L +AG S+ ++ D+ AR K + G++++LV TDVAARG
Sbjct: 272 LVFTATKRDADIVADRLAIAGFSAAALHGDMPQGARNRTLTKLRRGQVKILVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP++ V+NY+ P + +VHR+GR RAGR G+A SLV+ ++
Sbjct: 332 IDIPNITHVVNYDLPKFPEDYVHRIGRTGRAGRHGLAISLVNHND 376
>gi|343512818|ref|ZP_08749935.1| ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
gi|343515804|ref|ZP_08752853.1| ATP-dependent RNA helicase [Vibrio sp. N418]
gi|342794506|gb|EGU30271.1| ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
gi|342797618|gb|EGU33262.1| ATP-dependent RNA helicase [Vibrio sp. N418]
Length = 419
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKAGKVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VIN++ P KA+ ++HR+GR RAG+ G+A SL+S DE
Sbjct: 312 LDINQLEQVINFDMPFKAEDYIHRIGRTGRAGKKGLAVSLMSRDE 356
>gi|323497187|ref|ZP_08102207.1| ATP-dependent RNA helicase [Vibrio sinaloensis DSM 21326]
gi|323317762|gb|EGA70753.1| ATP-dependent RNA helicase [Vibrio sinaloensis DSM 21326]
Length = 419
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
+DI L+ V+N++ P KA+ +VHR+GR RAG+ G A SL+S DE +YL
Sbjct: 312 LDINQLEQVVNFDMPYKAEDYVHRIGRTGRAGKEGFAVSLMSQDE--HYL 359
>gi|332662156|ref|YP_004444944.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332330970|gb|AEE48071.1| DEAD/DEAH box helicase domain protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 380
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + +++ + AGI S I+ + AR+ F+ GK+RVLV TD+AARG
Sbjct: 249 LVFTRTKHGADKINRDIVKAGIRSNAIHGNKSQNARQSALNGFKEGKLRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ +L VINY+ P + +VHR+GR RAG SG+A S S+E Y D+
Sbjct: 309 IDVDNLSHVINYDLPNIPETYVHRIGRTGRAGASGIALSFCDSEERAYLRDI 360
>gi|343507476|ref|ZP_08744881.1| ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC 700023]
gi|342798268|gb|EGU33892.1| ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC 700023]
Length = 419
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDSLAKELKLDGIKAASINGDKSQGARQKALDDFKAGKVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VIN++ P KA+ ++HR+GR RAG+ G+A SL+S DE
Sbjct: 312 LDINQLEQVINFDMPFKAEDYIHRIGRTGRAGKKGLAVSLMSRDE 356
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT T + + V +L G + ++ L ++R KF+ G +LV TDVAAR
Sbjct: 308 TIVFTRTVWETQRVAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGTRDILVATDVAAR 367
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP +D V+NY+ P +K ++HRVGR ARAG+SGVA +LV+ +L Y + LG+K
Sbjct: 368 GLDIPKVDVVLNYDMPQDSKTYIHRVGRTARAGKSGVAINLVTQYDLEIYARIEAALGKK 427
>gi|3775997|emb|CAA09201.1| RNA helicase [Arabidopsis thaliana]
Length = 376
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 183 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 242
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ EL +Y+ + +G+K
Sbjct: 243 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 302
>gi|295085349|emb|CBK66872.1| Superfamily II DNA and RNA helicases [Bacteroides xylanisolvens
XB1A]
Length = 374
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNMGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|325279879|ref|YP_004252421.1| DEAD/DEAH box helicase domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311688|gb|ADY32241.1| DEAD/DEAH box helicase domain protein [Odoribacter splanchnicus DSM
20712]
Length = 374
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + ++LG AGI S I+ + AR+ F++GK RV+V TD+AARG
Sbjct: 248 LVFSRTKHNADRIVRVLGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG +G A++ S +E ++ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGTAFTFCSQEERKLVDNIQKLTGKK 366
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + + R KF++G+ +L+ TDVA+R
Sbjct: 253 SMVFTRTCDATRLLALILRNLGLKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 313 GLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKK 372
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNMGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|336406430|ref|ZP_08587085.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345509853|ref|ZP_08789440.1| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
gi|335934634|gb|EGM96619.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345454658|gb|EEO51805.2| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
Length = 382
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 256 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 315
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 316 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNMGTALTFCSQEERKLVNDIQKLTGKKL 375
Query: 123 VLAD 126
AD
Sbjct: 376 NKAD 379
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L + R + KF++ +L+ TDVAARG
Sbjct: 311 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNTANILIATDVAARG 370
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ +L YL + LG K
Sbjct: 371 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGYK 429
>gi|456358119|dbj|BAM92564.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain,
RhlE protein [Agromonas oligotrophica S58]
Length = 471
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKSLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSS-DELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ DE+ Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGAEGVAISLVAGPDEMSYLRDI 361
>gi|262409233|ref|ZP_06085777.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645798|ref|ZP_06723482.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294809471|ref|ZP_06768175.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
gi|262352980|gb|EEZ02076.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638877|gb|EFF57211.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294443343|gb|EFG12106.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
Length = 374
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + KILG AGI S I+ + AR+ F++GK RV+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNMGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|260770147|ref|ZP_05879080.1| ATP-dependent RNA helicase [Vibrio furnissii CIP 102972]
gi|260615485|gb|EEX40671.1| ATP-dependent RNA helicase [Vibrio furnissii CIP 102972]
Length = 422
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + + L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 255 LVFTRTKQGSDALAQELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+N++ P KA+ +VHR+GR RAG++G A SL+S DE
Sbjct: 315 IDIAQLEQVVNFDMPFKAEDYVHRIGRTGRAGKAGFAVSLMSHDE 359
>gi|421497193|ref|ZP_15944377.1| DEAD box family ATP-dependent RNA helicase [Aeromonas media WS]
gi|407183820|gb|EKE57693.1| DEAD box family ATP-dependent RNA helicase [Aeromonas media WS]
Length = 431
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ + +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDVLVEELNLDGIKSAVVHGEKAQGSRRRALREFMEGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 308 LDIPDLQYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAVSFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQ 145
V + D + +++ + FGK PQ
Sbjct: 368 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ 398
>gi|194290281|ref|YP_002006188.1| DEAD/DEAH box helicase [Cupriavidus taiwanensis LMG 19424]
gi|193224116|emb|CAQ70125.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP-DEPENDENT
RNA HELICASE (C-terminal)(rhlE-like) [Cupriavidus
taiwanensis LMG 19424]
Length = 624
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G +RVLV TDVAARG
Sbjct: 314 IVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAARG 373
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ +++ + + F ++
Sbjct: 374 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDMFQWRRIERFTNQR 432
>gi|83310527|ref|YP_420791.1| superfamily II DNA/RNA helicase [Magnetospirillum magneticum AMB-1]
gi|82945368|dbj|BAE50232.1| Superfamily II DNA and RNA helicase [Magnetospirillum magneticum
AMB-1]
Length = 476
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V ++L AGI + I+ + AR+ A F+ G+I+ LV TD+AARG
Sbjct: 250 LVFTRTKHGANRVVELLEKAGIDADAIHGNKSQGARQKALADFRDGRIKALVATDIAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + VIN+ P + + +VHR+GR ARAG SG+A SL DE+ Y D+
Sbjct: 310 IDVDGITHVINFELPNEPESYVHRIGRTARAGASGIALSLCDGDEVAYLRDI 361
>gi|152981028|ref|YP_001352892.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
gi|151281105|gb|ABR89515.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
Length = 466
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G+IRVLV TDVAARG
Sbjct: 272 VVFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P + V+NY+ P + +VHR+GR RAGR+G+A SLV+ E
Sbjct: 332 IDVPGITHVVNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAE 376
>gi|377561113|ref|ZP_09790578.1| putative ATP-dependent RNA helicase [Gordonia otitidis NBRC 100426]
gi|377521674|dbj|GAB35743.1| putative ATP-dependent RNA helicase [Gordonia otitidis NBRC 100426]
Length = 546
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF++G I VLV TDVAAR
Sbjct: 279 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALKKFRSGDIDVLVATDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 339 GIDIDDVTHVINYQCPDDDKTYVHRIGRTGRAGRTGIAITLVDWDELHRWELIDSALKLG 398
>gi|375145001|ref|YP_005007442.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361059047|gb|AEV98038.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 419
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
M +VFT TK+ + V K L GIS+ I+ + AR+ KF++ +I+VLV TD+AA
Sbjct: 248 MALVFTRTKHGADRVAKELNNFGISAAAIHGNKSQQARQTALLKFRSRQIQVLVATDIAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDI L VINY+ P A+ +VHR+GR RAG +G+A S +E Y D+ + +
Sbjct: 308 RGIDIDELSHVINYDLPEVAETYVHRIGRTGRAGANGMAVSFCDQEEKAYLRDIEKLIKK 367
Query: 121 K-PVLADDSMK 130
PV+++ K
Sbjct: 368 SVPVISEHPFK 378
>gi|262275389|ref|ZP_06053199.1| ATP-dependent RNA helicase RhlE [Grimontia hollisae CIP 101886]
gi|262220634|gb|EEY71949.1| ATP-dependent RNA helicase RhlE [Grimontia hollisae CIP 101886]
Length = 436
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L GI++ I+ + +AR A F+TG +RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANKLARFLNEEGITAAPIHGNKSQSARTKALADFKTGDVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP L V+N+ P A+ +VHR+GR RAG G A SLV +DE
Sbjct: 307 IDIPQLPQVVNFEIPHVAEDYVHRIGRTGRAGEPGKAISLVCADE 351
>gi|145298647|ref|YP_001141488.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418360788|ref|ZP_12961453.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851419|gb|ABO89740.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356687976|gb|EHI52548.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 431
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + L L GI S ++ D +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDELVAELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L V+NY+ P A+ +VHR+GR RAG+SG+A S VS +E L++ +G+K
Sbjct: 308 LDIPDLQYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIEALIGQK 366
>gi|420155719|ref|ZP_14662575.1| DEAD/DEAH box helicase [Clostridium sp. MSTE9]
gi|394758696|gb|EJF41558.1| DEAD/DEAH box helicase [Clostridium sp. MSTE9]
Length = 595
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L A I + I+ + TAR+ + F+ +IRVLV TD+AARG
Sbjct: 250 LVFTRTKHGADRVARELARAKIQAQAIHGNKSQTARQQALSSFKARQIRVLVATDIAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINY+ P + +VHR+GR RAG G A S + DE Y D+ +G+
Sbjct: 310 IDIDELSHVINYDLPNVPETYVHRIGRTGRAGLDGTAISFCNIDEKPYLKDIEALIGKPV 369
Query: 122 PVLAD 126
PV+ D
Sbjct: 370 PVVED 374
>gi|365891188|ref|ZP_09429640.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. STM 3809]
gi|365332881|emb|CCE02171.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. STM 3809]
Length = 473
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI + I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKGLEKAGIPAQAIHGNKSQNHRERTLAAFRTGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG GVA SLV+ +DE+ Y D+
Sbjct: 309 IDVDGVSHVVNFDLPNVPETYVHRIGRTARAGADGVAISLVAGADEMSYLRDI 361
>gi|237807827|ref|YP_002892267.1| DEAD/DEAH box helicase [Tolumonas auensis DSM 9187]
gi|237500088|gb|ACQ92681.1| DEAD/DEAH box helicase domain protein [Tolumonas auensis DSM 9187]
Length = 416
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK V+ + K L GIS+ ++ D AR +F+TG++R LV TDVAARG
Sbjct: 246 LIFTRTKQAVDELAKELEKDGISAAAVHGDKSQGARDRGLEEFKTGQVRALVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VINY P A+ ++HR+GR RAG++G+A SLVS+ E
Sbjct: 306 LDIQQLQYVINYELPYNAEDYIHRIGRTGRAGQAGLAVSLVSNKE 350
>gi|156977147|ref|YP_001448053.1| hypothetical protein VIBHAR_05933 [Vibrio harveyi ATCC BAA-1116]
gi|156528741|gb|ABU73826.1| hypothetical protein VIBHAR_05933 [Vibrio harveyi ATCC BAA-1116]
Length = 421
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKAGKVRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RA +SG+A SL+S DE
Sbjct: 311 LDIQELEQVVNFDMPFKAEDYVHRIGRTGRARKSGLAVSLMSRDE 355
>gi|350272013|ref|YP_004883321.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596855|dbj|BAL00816.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L G+ + I+ + AR+ +F++G I++LV TD+AARG
Sbjct: 244 LVFTRTKHAADKVVKELAETGMVAMAIHGNKSQNARQTALKRFKSGDIKILVATDIAARG 303
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDIP L V NY P + + ++HR+GR RAG GVA S DE+ Y D+ +G+
Sbjct: 304 IDIPELSHVFNYELPNEPETYIHRIGRTGRAGLGGVAISFCDYDEIPYLKDIEKLMGQ 361
>gi|254481835|ref|ZP_05095078.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
gi|214037964|gb|EEB78628.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
Length = 435
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 74/118 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L AGI +T I+ + AR F++G++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAQQLDKAGIEATAIHGNKSQGARTRALEDFKSGRLRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P A+ +VHR+GR RAG SG AYSLV +DE+ D+ + R
Sbjct: 307 LDIAQLPQVVNFDLPNVAQDYVHRIGRTGRAGASGKAYSLVCADEIKQLNDIEQLIQR 364
>gi|449329410|gb|AGE95682.1| ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 465
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATKY VE + +IL S IYS +D AR+ N F T K +LVVTDVAAR
Sbjct: 204 TIVFAATKYAVELLLEILNKNNFESRGIYSSMDDEARRANFRDFNTSKFSILVVTDVAAR 263
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
G+DIP LD V+NY+ C + F+HRVGR GV YS V+ ++ ++ ++
Sbjct: 264 GLDIPYLDTVVNYDL-CDERTFLHRVGRVRGM---GVQYSFVTYTDVFHFFNI 312
>gi|436836087|ref|YP_007321303.1| DEAD/DEAH box helicase domain protein [Fibrella aestuarina BUZ 2]
gi|384067500|emb|CCH00710.1| DEAD/DEAH box helicase domain protein [Fibrella aestuarina BUZ 2]
Length = 658
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK VE + + + + G + ++ DL R +KF++G +LV TDVAA
Sbjct: 294 LMLVFCNTKRKVEEIVEEMMVRGYQAEGLHGDLRQAQRNNVMSKFRSGVTTILVATDVAA 353
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
RGID+ ++DAVINY+ P + +VHR+GR RAG+SG A+SLVS DE + D+
Sbjct: 354 RGIDVDNVDAVINYDVPLDEEYYVHRIGRTGRAGKSGRAFSLVSRDEKYRFRDI 407
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + + ++ DL+ R F+ GK +L+ TDVAARG
Sbjct: 330 IIFTRTKANAERLSLLSNTLEFDAIALHGDLNQNQRTGALDLFKAGKKSILIATDVAARG 389
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLVS +L L + LG+K
Sbjct: 390 LDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK 448
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V + L I++ I+ D T+R+ F++G RVLV TD+AARG
Sbjct: 249 LVFTRTKRGADRVARGLNKVNITAQAIHGDKSQTSRQTALNNFKSGATRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VIN+N P + +VHR+GR RAG SG A S DE+ + D+ +G+
Sbjct: 309 IDIDELSHVINFNLPNIPETYVHRIGRTGRAGLSGTAISFCEVDEVPFLRDIEKLIGKSI 368
Query: 122 PVLADDS--MKGKIR 134
P + D + M G +R
Sbjct: 369 PEVKDHAFPMSGALR 383
>gi|384222064|ref|YP_005613230.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
6]
gi|354960963|dbj|BAL13642.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
6]
Length = 522
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI+++ I+ + R+ A+F++G+IR LV TD+AARG
Sbjct: 249 LVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGEIRTLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ +EL Y D+
Sbjct: 309 IDVDGISHVINFDLPNVPETYVHRIGRTARAGADGTAISLVAGGEELSYLRDI 361
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V + L I++ I+ D T+R+ F++G RVLV TD+AARG
Sbjct: 249 LVFTRTKRGADRVARGLNKVNITAQAIHGDKSQTSRQTALNNFKSGATRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VIN+N P + +VHR+GR RAG SG A S DE+ + D+ +G+
Sbjct: 309 IDIDELSHVINFNLPNIPETYVHRIGRTGRAGLSGTAISFCEVDEVPFLRDIEKLIGKSI 368
Query: 122 PVLADDS--MKGKIR 134
P + D + M G +R
Sbjct: 369 PEVKDHAFPMSGALR 383
>gi|19074375|ref|NP_585881.1| ATP-DEPENDENT RNA HELICASE (DEAD BOX FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069017|emb|CAD25485.1| ATP-DEPENDENT RNA HELICASE (DEAD BOX FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 465
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATKY VE + +IL S IYS +D AR+ N F T K +LVVTDVAAR
Sbjct: 204 TIVFAATKYAVELLLEILNKNNFESRGIYSSMDDEARRANFRDFNTSKFSILVVTDVAAR 263
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
G+DIP LD V+NY+ C + F+HRVGR GV YS V+ ++ ++ ++
Sbjct: 264 GLDIPYLDTVVNYDL-CDERTFLHRVGRVRGM---GVQYSFVTYTDVFHFFNI 312
>gi|387824537|ref|YP_005824008.1| ATP-dependent RNA helicase RhlE [Francisella cf. novicida 3523]
gi|332184003|gb|AEE26257.1| ATP-dependent RNA helicase RhlE [Francisella cf. novicida 3523]
Length = 445
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 75/117 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L AGI+S+ I+ + TAR A F++ +I VLV TD+AARG
Sbjct: 247 LVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKEINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+ ++ +G
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEHLIG 363
>gi|440759128|ref|ZP_20938281.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
gi|436427144|gb|ELP24828.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
Length = 457
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GIS+ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|393783444|ref|ZP_10371617.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
gi|392668877|gb|EIY62370.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
Length = 421
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + + L AGI + I+ + AR+ +F+ +RVL+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARTLTKAGIRAEAIHGNKSQNARQRALTEFKNHTLRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR-- 120
ID+ L VINY P + +VHR+GR RAG G+A S S+E+ Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGIAISFCESEEIPYLKDIQKLIGKTI 364
Query: 121 -----KPVLADDSMKGK 132
P + ++ MK +
Sbjct: 365 PVVSEHPFITNEGMKAQ 381
>gi|307243618|ref|ZP_07525761.1| putative ATP-dependent RNA helicase DeaD [Peptostreptococcus
stomatis DSM 17678]
gi|306492987|gb|EFM64997.1| putative ATP-dependent RNA helicase DeaD [Peptostreptococcus
stomatis DSM 17678]
Length = 538
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+TVVFT TK + + L G + ++ DL R I KF+ G I +LV TDVAA
Sbjct: 245 LTVVFTNTKKGADELVSSLQARGYGADSLHGDLKQVQRDIVMDKFRAGTIDILVATDVAA 304
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGIDI ++ VINY P + +VHR+GR RAGR G+A+S E+ D+ +
Sbjct: 305 RGIDIDDVECVINYELPQDDEYYVHRIGRTGRAGREGIAFSFAFGREMRKLKDIERYTKS 364
Query: 121 KPVLAD-----DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE 160
K V D D + K+ F + + L E I++ + W+E
Sbjct: 365 KIVKHDIPSVNDVEEKKVSQ---FFQGVKETLEEGNIAKHVQWIE 406
>gi|94311500|ref|YP_584710.1| ATP-dependent RNA helicase [Cupriavidus metallidurans CH34]
gi|93355352|gb|ABF09441.1| ATP-dependent RNA helicase [Cupriavidus metallidurans CH34]
Length = 634
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G S+ ++ D+ AR + G +RVLV TDVAA
Sbjct: 312 QAIVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAA 371
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
RGID+P + V+N++ P +A+ +VHR+GR RAGRSGVA +LV+ ++ + + F
Sbjct: 372 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHGDMFQWRRIERF 428
>gi|390433214|ref|ZP_10221752.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans IG1]
Length = 456
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GIS+ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|372277732|ref|ZP_09513768.1| ATP-dependent RNA helicase RhlE [Pantoea sp. SL1_M5]
Length = 457
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GIS+ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|326383298|ref|ZP_08204986.1| DEAD/DEAH box helicase domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326198048|gb|EGD55234.1| DEAD/DEAH box helicase domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 526
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+ GKI VLV TDVAAR
Sbjct: 289 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALNKFREGKIDVLVATDVAAR 348
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
GID+ + VINY P K +VHR+GR RAGR+G+A +LV DEL +
Sbjct: 349 GIDVDDVTHVINYQCPDDEKTYVHRIGRTGRAGRTGIAITLVDWDELHRW 398
>gi|323493912|ref|ZP_08099029.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
gi|323311853|gb|EGA65000.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
Length = 419
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++G++R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGQVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE--LCYYLDLLL 116
+DI L+ V+N++ P KA+ +VHR+GR RAG+ G A SL+S DE L + ++ LL
Sbjct: 312 LDIQQLEQVVNFDMPYKAEDYVHRIGRTGRAGKEGFAVSLMSRDEEYLLHAIERLL 367
>gi|126664485|ref|ZP_01735469.1| DNA and RNA helicase [Marinobacter sp. ELB17]
gi|126630811|gb|EBA01425.1| DNA and RNA helicase [Marinobacter sp. ELB17]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + LG GI++ I+ + AR A+F+ G IRVLV TD+AARG
Sbjct: 246 LVFTRTKHGANRLTEKLGKDGITAAAIHGNKSQGARTRALAEFKQGDIRVLVATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+N+ P + +VHR+GR RAG SG A SLVS+DEL + +
Sbjct: 306 LDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADELSMLVGI 357
>gi|430809238|ref|ZP_19436353.1| ATP-dependent RNA helicase [Cupriavidus sp. HMR-1]
gi|429498382|gb|EKZ96892.1| ATP-dependent RNA helicase [Cupriavidus sp. HMR-1]
Length = 641
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G S+ ++ D+ AR + G +RVLV TDVAA
Sbjct: 313 QAIVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAA 372
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
RGID+P + V+N++ P +A+ +VHR+GR RAGRSGVA +LV+ ++ + + F
Sbjct: 373 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHGDMFQWRRIERF 429
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T H + + + G S+ ++ L + R +F++GK +LV TDVAARG
Sbjct: 317 IIFTRTCAHSQRTALLSRILGFSAVPLHGQLTQSQRLSALNRFKSGKTNILVATDVAARG 376
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLL 116
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SLV+ Y L+LL+
Sbjct: 377 LDIPSVDIVINYDIPTDSKAYIHRVGRTARAGRSGKSVSLVTQ----YDLELLI 426
>gi|404406153|ref|ZP_10997737.1| DNA/RNA helicase [Alistipes sp. JC136]
Length = 541
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 68/117 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + KIL AGI S+ I+ + AR F+ G RVL+ TD+AARG
Sbjct: 248 LVFTRTKHGADKLAKILNRAGIQSSAIHGNKSQNARVKAMNDFKGGFCRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L VINY+ P + +VHR+GR RAG G A+S S DE Y D+ G
Sbjct: 308 IDIDQLPLVINYDLPEVPETYVHRIGRTGRAGYEGTAWSFCSEDEFDYLKDIQKLTG 364
>gi|304395765|ref|ZP_07377648.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
gi|304357059|gb|EFM21423.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
Length = 457
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GIS+ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|153207356|ref|ZP_01946093.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii 'MSU
Goat Q177']
gi|161830442|ref|YP_001596593.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA
331]
gi|165918485|ref|ZP_02218571.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii Q321]
gi|120576665|gb|EAX33289.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii 'MSU
Goat Q177']
gi|161762309|gb|ABX77951.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA
331]
gi|165917853|gb|EDR36457.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii Q321]
Length = 411
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 70/119 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+SS I+ + AR +F+ GKIRVLV TDVAARG
Sbjct: 251 LVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L VIN+ P AK +VHRVGR RA GVA SLVS DE+ D+ L K
Sbjct: 311 LDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEKLLQSK 369
>gi|264677685|ref|YP_003277591.1| hypothetical protein CtCNB1_1549 [Comamonas testosteroni CNB-2]
gi|262208197|gb|ACY32295.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 616
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG++R LV TD+AARG
Sbjct: 254 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGELRALVATDIAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 314 IDIDELPNVVNYEIPNISEDYVHRIGRTGRAGREGNAVSLVCMDEEGFMMDIERF 368
>gi|441506222|ref|ZP_20988197.1| ATP-dependent RNA helicase [Photobacterium sp. AK15]
gi|441426010|gb|ELR63497.1| ATP-dependent RNA helicase [Photobacterium sp. AK15]
Length = 428
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K LGL GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 262 LVFTKTKQGSDALAKELGLDGIKAASINGDKSQGARQRALNDFKDGKVRALIATDVAARG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG++G A SL+S DE
Sbjct: 322 LDIEQLEYVVNFDMPFKAEDYVHRIGRTGRAGQAGNAISLMSLDE 366
>gi|340786652|ref|YP_004752117.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
gi|340551919|gb|AEK61294.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
Length = 468
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 274 VVFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDSLRRGQVRVLVATDVAARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P + +VHR+GR RAGR+GVA SLV+ E
Sbjct: 334 IDVPAITHVFNYDLPKFPEDYVHRIGRTGRAGRNGVAVSLVNHAE 378
>gi|237755972|ref|ZP_04584559.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691876|gb|EEP60897.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 405
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + + + L G +++ I+ D R+ F+TGK+++LV TDVAARG
Sbjct: 250 IIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI +D VINY P A+ ++HR+GR RAGR G A S+++S E
Sbjct: 310 LDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTSSE 354
>gi|405360716|ref|ZP_11025657.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397090405|gb|EJJ21269.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 503
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V K L AG+SS I+ + AR+ +F++G +RVLV TD+AARG
Sbjct: 248 LVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L V+NY+ P + +VHR+GR RAG SG A S ++E Y D+ + R
Sbjct: 308 IDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIERTIRRNV 367
Query: 122 PVLAD 126
PV+ D
Sbjct: 368 PVVED 372
>gi|393787534|ref|ZP_10375666.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
gi|392658769|gb|EIY52399.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
Length = 422
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + +IL +GI + I+ + AR+ F+ +RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLARILTKSGIRAEAIHGNKSQNARQRALTDFKNHTLRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG G+A S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGIAISFCESEELPYLKDIQKLIGKTV 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|407014444|gb|EKE28458.1| hypothetical protein ACD_3C00056G0002 [uncultured bacterium (gcode
4)]
Length = 415
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + K L A I++ I+ + AR+ F++G+ RVLV TD+AAR
Sbjct: 249 LVFSRTKHWADRIVKDLEKAWIAAEAIHGNKSQNARQRALGNFKSGQTRVLVATDIAARW 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ +L V+NY+ P +++ +VHR+GR RAG +GVA S DE+ Y +D+ LG KP
Sbjct: 309 IDVDNLSHVVNYDLPNESETYVHRIGRTWRAGNNGVAISFCEQDEVEYLVDIEKLLG-KP 367
Query: 123 V 123
+
Sbjct: 368 I 368
>gi|373500494|ref|ZP_09590875.1| hypothetical protein HMPREF9140_00993 [Prevotella micans F0438]
gi|371953428|gb|EHO71253.1| hypothetical protein HMPREF9140_00993 [Prevotella micans F0438]
Length = 531
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + + L I+ ++SDL+ R +F++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIAQSLNQKQINCGQMHSDLEQAERDEMMFRFKSGQIDVLVATDILARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R GVA + V+ D++ ++ + FLGR+
Sbjct: 309 IDIDDIAMVINYDGPHDAEDYVHRIGRTARADRDGVAITFVNDDDIYFFQQIEKFLGRE 367
>gi|299530317|ref|ZP_07043742.1| hypothetical protein CTS44_06063 [Comamonas testosteroni S44]
gi|298721688|gb|EFI62620.1| hypothetical protein CTS44_06063 [Comamonas testosteroni S44]
Length = 613
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG++R LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGELRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 311 IDIDELPNVVNYEIPNISEDYVHRIGRTGRAGREGNAVSLVCMDEEGFMMDIERF 365
>gi|418530871|ref|ZP_13096791.1| hypothetical protein CTATCC11996_14313 [Comamonas testosteroni ATCC
11996]
gi|371451950|gb|EHN64982.1| hypothetical protein CTATCC11996_14313 [Comamonas testosteroni ATCC
11996]
Length = 609
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG++R LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGELRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 311 IDIDELPNVVNYEIPNISEDYVHRIGRTGRAGREGNAVSLVCMDEEGFMMDIERF 365
>gi|260777564|ref|ZP_05886457.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605577|gb|EEX31862.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
Length = 420
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++G IR L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGTIRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+ G+A SL+S DE
Sbjct: 311 LDINQLEQVVNFDMPYKAEDYVHRIGRTGRAGQEGLAVSLMSKDE 355
>gi|375093701|ref|ZP_09739966.1| DNA/RNA helicase, superfamily II [Saccharomonospora marina XMU15]
gi|374654434|gb|EHR49267.1| DNA/RNA helicase, superfamily II [Saccharomonospora marina XMU15]
Length = 635
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GKI VLV TDVAA
Sbjct: 357 LTMIFTRTKRTAQKVADDLAERGFAAAAVHGDLGQGAREQALRAFRSGKIDVLVATDVAA 416
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P K +VHR+GR RAG++GVA +LV DEL +
Sbjct: 417 RGIDVDDVTHVINYQTPDDEKTYVHRIGRTGRAGKTGVAITLVDWDELPRW 467
>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
43183]
gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 372
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK++ + + ++L AGI S I+ + AR+ F+TGKIRV++ TD+AARG
Sbjct: 246 LVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVMIATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 306 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNLGTALTFCSQEERKLVNDIQKLTGKK 364
>gi|221068202|ref|ZP_03544307.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
gi|220713225|gb|EED68593.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
Length = 613
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG++R LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGELRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 311 IDIDELPNVVNYEIPNISEDYVHRIGRTGRAGREGNAVSLVCMDEEGFMMDIERF 365
>gi|330446057|ref|ZP_08309709.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490248|dbj|GAA04206.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 426
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K LGL GI + I D AR+ +F++GK+RVLV TDVAARG
Sbjct: 260 LVFTKTKQGSDKLAKDLGLDGIKAVSINGDKSQGARQRALDEFKSGKVRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L V+N++ P KA+ +VHR+GR RAG +G A +L+S DE
Sbjct: 320 LDIEQLGYVVNFDMPYKAEDYVHRIGRTGRAGMTGHAITLMSLDE 364
>gi|379725028|ref|YP_005317159.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386727777|ref|YP_006194103.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|378573700|gb|AFC34010.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384094902|gb|AFH66338.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 422
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L A I++ I+ D AR+ F++G R+LV TD+AARG
Sbjct: 249 LVFTRTKHGADRVVRGLTKAKITAQAIHGDKSQNARQAALNNFKSGATRLLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINYN P + +VHR+GR RAG SG+A S ++E+ Y D+ +K
Sbjct: 309 IDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCENEEIPYLKDIEKLTKQKI 368
Query: 122 PVLAD 126
PV+ D
Sbjct: 369 PVVTD 373
>gi|27376558|ref|NP_768087.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
110]
gi|27349699|dbj|BAC46712.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
110]
Length = 530
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI+++ I+ + R+ A+F++G IR LV TD+AARG
Sbjct: 263 LVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGDIRTLVATDIAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL---------- 112
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ E YL
Sbjct: 323 IDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEELSYLRDIERLIKVA 382
Query: 113 ----DLLLFLGRKPVLADDSMKGKIRHQDGMFGKIPQG 146
DL GR+ S + + R G G+ PQG
Sbjct: 383 LPREDLRTDAGRRDAGPPPSQQRQGR--PGRPGQRPQG 418
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T + + + +L G S+ ++ L +AR KF+ G +LV TDVAAR
Sbjct: 304 TIVFLRTVHDTQRLAILLRTLGFSALPLHGQLSQSARLGALNKFRAGSRDILVATDVAAR 363
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAG+SG A SLV+ +L +L + +G+K
Sbjct: 364 GLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSLVTQYDLEIWLRIEASMGKK 423
>gi|339326701|ref|YP_004686394.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
gi|338166858|gb|AEI77913.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
Length = 656
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G +RVLV TDVAARG
Sbjct: 323 IVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAARG 382
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG A +LV+ +++ + + F ++
Sbjct: 383 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGTAINLVNHNDMFQWKRIERFTNQR 441
>gi|134095506|ref|YP_001100581.1| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
gi|133739409|emb|CAL62459.1| Putative ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
Length = 468
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G+IRVLV TDVAARG
Sbjct: 274 VVFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P + +VHR+GR RAGR+G+A SLV+ E
Sbjct: 334 IDVPAITHVFNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAE 378
>gi|399546760|ref|YP_006560068.1| ATP-dependent RNA helicase rhlE [Marinobacter sp. BSs20148]
gi|399162092|gb|AFP32655.1| ATP-dependent RNA helicase rhlE [Marinobacter sp. BSs20148]
Length = 444
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + LG GI++ I+ + AR A+F+ G IRVLV TD+AARG
Sbjct: 246 LVFTRTKHGANRLTEKLGKDGITAAAIHGNKSQGARTRALAEFKQGDIRVLVATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+N+ P + +VHR+GR RAG SG A SLVS+DEL + +
Sbjct: 306 LDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADELSMLVGI 357
>gi|337752121|ref|YP_004646283.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336303310|gb|AEI46413.1| DEAD/DEAH box helicase domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 422
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L A I++ I+ D AR+ F++G R+LV TD+AARG
Sbjct: 249 LVFTRTKHGADRVVRGLTKAKITAQAIHGDKSQNARQAALNNFKSGATRLLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINYN P + +VHR+GR RAG SG+A S ++E+ Y D+ +K
Sbjct: 309 IDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCENEEIPYLKDIEKLTKQKI 368
Query: 122 PVLAD 126
PV+ D
Sbjct: 369 PVVTD 373
>gi|113868657|ref|YP_727146.1| ATP-dependent RNA helicase [Ralstonia eutropha H16]
gi|113527433|emb|CAJ93778.1| ATP-dependent RNA helicase [Ralstonia eutropha H16]
Length = 646
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G S+ ++ D+ AR + G +RVLV TDVAARG
Sbjct: 323 IVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAARG 382
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG A +LV+ +++ + + F ++
Sbjct: 383 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGTAINLVNHNDMFQWKRIERFTNQR 441
>gi|407791415|ref|ZP_11138499.1| DEAD/DEAH box helicase [Gallaecimonas xiamenensis 3-C-1]
gi|407200206|gb|EKE70216.1| DEAD/DEAH box helicase [Gallaecimonas xiamenensis 3-C-1]
Length = 256
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK V+ + K L GIS+ ++ D AR +F+TG++R LV TDVAARG
Sbjct: 89 LIFTRTKQAVDALAKELEKDGISAAAVHGDKSQGARDRGLEEFKTGQVRALVATDVAARG 148
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VINY P A+ ++HR+GR RAG++G+A SLVS+ +
Sbjct: 149 LDIEQLQFVINYELPYNAEDYIHRIGRTGRAGQAGLAVSLVSNKD 193
>gi|383456574|ref|YP_005370563.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
gi|380734129|gb|AFE10131.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
Length = 421
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+ F A++Y ++V L AGI +T ++ DL AR A F+ ++RVLV TDVAARG
Sbjct: 250 LTFVASRYAADHVALKLNRAGIPATSLHGDLSQGARTQALADFKAKRVRVLVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
+DI L AV+NY+ P +VHR+GR RAG GVA S VS+D ++
Sbjct: 310 LDIAGLPAVVNYDLPRSTVDYVHRIGRTGRAGDPGVAISFVSADTEAHF 358
>gi|345867959|ref|ZP_08819956.1| ATP-dependent RNA helicase rhlE [Bizionia argentinensis JUB59]
gi|344047610|gb|EGV43237.1| ATP-dependent RNA helicase rhlE [Bizionia argentinensis JUB59]
Length = 427
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK+ + K + +GI++ I+ + AR A F++G+I VLV TD+AARG
Sbjct: 247 LVFARTKHGANKLCKSMISSGITAAAIHGNKSQGARTKALAGFKSGQISVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L VIN+ P ++ +VHR+GR RAG SG A SLVS+DE + D+ +G K
Sbjct: 307 LDIPLLPHVINFELPNISEDYVHRIGRTGRAGASGEAISLVSADETTFLRDIEKLVGEK 365
>gi|167625497|ref|YP_001675791.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167355519|gb|ABZ78132.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 492
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI++ I+ + AR A F++G +RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKNLEAKGITAAAIHGNKSQGARTKALADFKSGAVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF----L 118
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E+ D+ L L
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGHAVSLVSSEEIKLLRDIELLIKQNL 366
Query: 119 GRKPV 123
R+PV
Sbjct: 367 ERRPV 371
>gi|415939512|ref|ZP_11555529.1| ATP-dependent RNA helicase, partial [Herbaspirillum frisingense
GSF30]
gi|407759311|gb|EKF69022.1| ATP-dependent RNA helicase, partial [Herbaspirillum frisingense
GSF30]
Length = 397
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+FTATK + + L +AG ++ ++ D+ AR + G++R+LV TDVAARG
Sbjct: 272 VIFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLNSLRRGQVRMLVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P + V NY+ P A+ +VHR+GR RAGR+GVA SLV+ E
Sbjct: 332 IDVPGITHVFNYDLPKFAEDYVHRIGRTGRAGRNGVAISLVNHAE 376
>gi|256374971|ref|YP_003098631.1| DEAD/DEAH box helicase domain-containing protein [Actinosynnema
mirum DSM 43827]
gi|255919274|gb|ACU34785.1| DEAD/DEAH box helicase domain protein [Actinosynnema mirum DSM
43827]
Length = 609
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
++++FT TK + V + G + ++ DL AR+ F++GKI VLV TDVAA
Sbjct: 295 LSMIFTRTKRTAQKVADDMAERGFAVAAVHGDLGQGAREQALRAFRSGKIDVLVATDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL---DLLLF 117
RGID+ + V+NY P K +VHR+GR RAGR+GVA +LV DE+ + D L
Sbjct: 355 RGIDVEGVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGVAVTLVDWDEIPRWQMISDALNL 414
Query: 118 LGRKPV---LADDSMKGKIRHQDGMFGKIPQGL 147
R PV D + ++ G G++P GL
Sbjct: 415 GKRDPVETYSTSDHLFAELGIPAGSTGRLPLGL 447
>gi|209363862|ref|YP_001424084.2| ATP-dependent RNA helicase [Coxiella burnetii Dugway 5J108-111]
gi|212212853|ref|YP_002303789.1| ATP-dependent RNA helicase [Coxiella burnetii CbuG_Q212]
gi|212219099|ref|YP_002305886.1| ATP-dependent RNA helicase [Coxiella burnetii CbuK_Q154]
gi|215919015|ref|NP_819700.2| ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA 493]
gi|206583900|gb|AAO90214.2| ATP-dependent RNA helicase [Coxiella burnetii RSA 493]
gi|207081795|gb|ABS77088.2| ATP-dependent RNA helicase [Coxiella burnetii Dugway 5J108-111]
gi|212011263|gb|ACJ18644.1| ATP-dependent RNA helicase [Coxiella burnetii CbuG_Q212]
gi|212013361|gb|ACJ20741.1| ATP-dependent RNA helicase [Coxiella burnetii CbuK_Q154]
Length = 420
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 68/112 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+SS I+ + AR +F+ GKIRVLV TDVAARG
Sbjct: 260 LVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L VIN+ P AK +VHRVGR RA GVA SLVS DE+ D+
Sbjct: 320 LDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDI 371
>gi|375109850|ref|ZP_09756089.1| ATP-dependent RNA helicase [Alishewanella jeotgali KCTC 22429]
gi|374570019|gb|EHR41163.1| ATP-dependent RNA helicase [Alishewanella jeotgali KCTC 22429]
Length = 416
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + +L AGIS+ I+ + AR A+F+ G IRVLV TD+AARG
Sbjct: 251 LVFTKTKHGANKLTLLLEKAGISAMAIHGNKSQNARTKALAEFKAGGIRVLVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
+DI L V+NY P A+ +VHR+GR RAG +G+A SLV ++EL
Sbjct: 311 LDIQQLPQVVNYELPNVAEDYVHRIGRTGRAGAAGLAVSLVCAEEL 356
>gi|303389708|ref|XP_003073086.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302230|gb|ADM11726.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon intestinalis
ATCC 50506]
Length = 464
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATKY VE + +IL S IYS +D AR+ N F + K +LVVTDVAAR
Sbjct: 204 TIVFVATKYAVELLLEILNKNNFESRGIYSSMDDEARRTNFKDFNSSKFNILVVTDVAAR 263
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
G+DIP LD V+NY+ C + F+HRVGR GV YS V+ ++ ++ ++
Sbjct: 264 GLDIPYLDTVVNYDL-CDERTFLHRVGRVRGM---GVQYSFVTYTDVFHFFNI 312
>gi|254877101|ref|ZP_05249811.1| ATP-dependent RNA helicase rhlE [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843122|gb|EET21536.1| ATP-dependent RNA helicase rhlE [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 445
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 74/117 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L AGI+S+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+ ++ +G
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEHLIG 363
>gi|398820506|ref|ZP_10579026.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. YR681]
gi|398228828|gb|EJN14930.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. YR681]
Length = 524
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI+++ I+ + R+ A+F++G+IR LV TD+AARG
Sbjct: 263 LVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGEIRTLVATDIAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL---------- 112
ID+ + VIN++ P + +VHR+GR ARAG G A SLV+ E YL
Sbjct: 323 IDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEEFAYLRDIERLIKVA 382
Query: 113 ----DLLLFLGRKPVLADDSMKGKIRHQDGMFGKIPQGLME------DQISEIMNWVELD 162
DL GR+ A + + + + G G+ PQG D+
Sbjct: 383 LPREDLRTDAGRRD--AGPPPQQQRQGRPGRPGQRPQGARHGDGRRTDERHADGRHHSAG 440
Query: 163 ADMEGIQKTCNNAYKKYVKSRPGASVESVKKVK 195
EG + ++V RPG + + ++ +
Sbjct: 441 KQGEGRPGESRHGDARHVDGRPGNASKGSRRRR 473
>gi|15827355|ref|NP_301618.1| ATP-dependent RNA helicase [Mycobacterium leprae TN]
gi|221229833|ref|YP_002503249.1| ATP-dependent RNA helicase [Mycobacterium leprae Br4923]
gi|13092904|emb|CAC30321.1| putative ATP-dependent RNA helicase [Mycobacterium leprae]
gi|219932940|emb|CAR70906.1| putative ATP-dependent RNA helicase [Mycobacterium leprae Br4923]
Length = 544
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG + VLV TDVAAR
Sbjct: 288 TMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAAR 347
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 348 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELHRWETIDKALGLG 407
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF T + + + +L G S+ ++ L +AR KF+ G +LV TDVAAR
Sbjct: 304 TIVFLRTVHDTQRLAILLRTLGFSALPLHGQLSQSARLGALNKFRAGSRDILVATDVAAR 363
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAG+SG A SLV+ +L +L + +G+K
Sbjct: 364 GLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSLVTQYDLEIWLRIEASMGKK 423
Query: 122 ----PVLADDSM 129
P D+ M
Sbjct: 424 LDEFPTEKDEVM 435
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V K L AG+SS I+ + AR+ +F++G +RVLV TD+AARG
Sbjct: 248 LVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L V+NY+ P + +VHR+GR RAG SG A S ++E Y D+ + R
Sbjct: 308 IDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIERTIRRNV 367
Query: 122 PVLAD 126
PV+ D
Sbjct: 368 PVVED 372
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + + L GI S I+ D R+ +F++GK+RV+V TDVAARG
Sbjct: 305 IVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVMVATDVAARG 364
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
+DIP L V NY+ P +A ++HR+GR RAG SG+A +L EL
Sbjct: 365 LDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAEL 410
>gi|397169056|ref|ZP_10492491.1| ATP-dependent RNA helicase [Alishewanella aestuarii B11]
gi|396089136|gb|EJI86711.1| ATP-dependent RNA helicase [Alishewanella aestuarii B11]
Length = 418
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + +L AGIS+ I+ + AR A+F+ G IRVLV TD+AARG
Sbjct: 251 LVFTKTKHGANKLTLLLEKAGISAMAIHGNKSQNARTKALAEFKAGGIRVLVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
+DI L V+NY P A+ +VHR+GR RAG +G+A SLV ++EL
Sbjct: 311 LDIQQLPQVVNYELPNVAEDYVHRIGRTGRAGAAGLAVSLVCAEEL 356
>gi|393763310|ref|ZP_10351931.1| DEAD/DEAH box helicase [Alishewanella agri BL06]
gi|392605650|gb|EIW88540.1| DEAD/DEAH box helicase [Alishewanella agri BL06]
Length = 416
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + +L AGIS+ I+ + AR A+F+ G IRVLV TD+AARG
Sbjct: 251 LVFTKTKHGANKLTLLLEKAGISAMAIHGNKSQNARTKALAEFKAGGIRVLVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
+DI L V+NY P A+ +VHR+GR RAG +G+A SLV ++EL
Sbjct: 311 LDIQQLPQVVNYELPNVAEDYVHRIGRTGRAGAAGLAVSLVCAEEL 356
>gi|409407228|ref|ZP_11255679.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386432979|gb|EIJ45805.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 508
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+FTATK + + L +AG ++ ++ D+ AR + G++R+LV TDVAARG
Sbjct: 272 VIFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLNSLRRGQVRMLVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P + V NY+ P A+ +VHR+GR RAGR+GVA SLV+ E
Sbjct: 332 IDVPGITHVFNYDLPKFAEDYVHRIGRTGRAGRNGVAISLVNHAE 376
>gi|261251247|ref|ZP_05943821.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417956619|ref|ZP_12599583.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260938120|gb|EEX94108.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342809459|gb|EGU44578.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 419
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++G++R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGQVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG+ G A SL+S DE
Sbjct: 312 LDIQQLEQVVNFDMPYKAEDYVHRIGRTGRAGKEGFAVSLMSRDE 356
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V K L AG+SS I+ + AR+ +F++G +RVLV TD+AARG
Sbjct: 248 LVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L V+NY+ P + +VHR+GR RAG SG A S ++E Y D+ + R
Sbjct: 308 IDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIERTIRRNV 367
Query: 122 PVLAD 126
PV+ D
Sbjct: 368 PVVED 372
>gi|291616785|ref|YP_003519527.1| RhlE [Pantoea ananatis LMG 20103]
gi|291151815|gb|ADD76399.1| RhlE [Pantoea ananatis LMG 20103]
Length = 449
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GI++ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|254374244|ref|ZP_04989726.1| hypothetical protein FTDG_00409 [Francisella novicida GA99-3548]
gi|151571964|gb|EDN37618.1| hypothetical protein FTDG_00409 [Francisella novicida GA99-3548]
Length = 441
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK + + L AGISS+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQEGLAISLVSADEV 352
>gi|160888927|ref|ZP_02069930.1| hypothetical protein BACUNI_01347 [Bacteroides uniformis ATCC 8492]
gi|270293944|ref|ZP_06200146.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|423306019|ref|ZP_17284018.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|423309437|ref|ZP_17287427.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
gi|156861394|gb|EDO54825.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
gi|270275411|gb|EFA21271.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|392679863|gb|EIY73240.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|392684477|gb|EIY77802.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
Length = 425
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + + L +GI + I+ + AR+ F+ ++RVL+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG G+A S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLIGKSI 364
Query: 122 PVLAD 126
PV+ +
Sbjct: 365 PVIKE 369
>gi|300312721|ref|YP_003776813.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300075506|gb|ADJ64905.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 510
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+FTATK + + L +AG ++ ++ D+ AR + G++R+LV TDVAARG
Sbjct: 272 VIFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLNSLRRGQVRMLVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P + V NY+ P A+ +VHR+GR RAGR+GVA SLV+ E
Sbjct: 332 IDVPGITHVFNYDLPKFAEDYVHRIGRTGRAGRNGVAISLVNHAE 376
>gi|404448789|ref|ZP_11013781.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
gi|403765513|gb|EJZ26391.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
Length = 398
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK+ + V K+L GI + I+ + AR+ F+ GKIR+LV TD+AARG
Sbjct: 246 LVFGRTKHGSDKVVKLLQREGIKAAAIHGNKSQNARQNALNDFKNGKIRILVATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L V NY+ P + +VHR+GR RAG SGVA S D + Y D+ +G K
Sbjct: 306 IDIDELATVFNYDLPNIPETYVHRIGRTGRAGNSGVAISFADQDTMKEYRDIEKLIGIKI 365
Query: 122 PVL 124
PV+
Sbjct: 366 PVI 368
>gi|254372784|ref|ZP_04988273.1| ATP-dependent RNA helicase RhlE [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570511|gb|EDN36165.1| ATP-dependent RNA helicase RhlE [Francisella novicida GA99-3549]
Length = 442
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK + + L AGISS+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQEGLAISLVSADEV 352
>gi|387133384|ref|YP_006299356.1| DEAD/DEAH box helicase [Prevotella intermedia 17]
gi|386376232|gb|AFJ08050.1| DEAD/DEAH box helicase [Prevotella intermedia 17]
Length = 579
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIALSLNQKKINCGQMHSDLDQAQRDEMMFKFKSGQIDVLVATDILARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R GVA + V+ D++ Y+ + FL ++
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARADRDGVAITFVNEDDIYYFQQIEKFLEKE 367
>gi|383316477|ref|YP_005377319.1| DNA/RNA helicase [Frateuria aurantia DSM 6220]
gi|379043581|gb|AFC85637.1| DNA/RNA helicase, superfamily II [Frateuria aurantia DSM 6220]
Length = 442
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF+ TK+ + + K L AG+ S I+ + AR A F++G+ VLV TD+AAR
Sbjct: 245 TLVFSRTKHGADKLVKFLDAAGLRSAAIHGNKSQNARTRALADFKSGRTTVLVATDIAAR 304
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDI L VIN++ P A+ +VHR+GR RAG G+A SLVS DE D+ L +
Sbjct: 305 GIDIDQLPVVINFDLPMVAEDYVHRIGRTGRAGAEGLAISLVSHDESGLLRDIRKLLNQD 364
Query: 122 PVLAD 126
+A+
Sbjct: 365 IAIAN 369
>gi|393722546|ref|ZP_10342473.1| DEAD/DEAH box helicase, partial [Sphingomonas sp. PAMC 26605]
Length = 480
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K+L G+ S I+ + R+ A+F++GK +VLV TD+AARG
Sbjct: 248 LVFTRTKHGADRVVKLLAANGMDSNAIHGNKSQPQRERALAEFKSGKAKVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ + V N+ P + +VHR+GR ARAG SG A S V+ DE Y D+ KP
Sbjct: 308 IDVSGVSHVFNFELPNVPEQYVHRIGRTARAGASGTAISFVADDERTYLRDIEKLTKVKP 367
>gi|317479221|ref|ZP_07938356.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
gi|316904509|gb|EFV26328.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
Length = 425
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TKY + + + L +GI + I+ + AR+ F+ ++RVL+ TD+AARG
Sbjct: 245 LIFTRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG G+A S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLIGKSI 364
Query: 122 PVLAD 126
PV+ +
Sbjct: 365 PVIKE 369
>gi|118497423|ref|YP_898473.1| ATP-dependent RNA helicase [Francisella novicida U112]
gi|195536115|ref|ZP_03079122.1| dead/deah box helicase domain protein [Francisella novicida FTE]
gi|118423329|gb|ABK89719.1| ATP-dependent RNA helicase [Francisella novicida U112]
gi|194372592|gb|EDX27303.1| dead/deah box helicase domain protein [Francisella tularensis
subsp. novicida FTE]
Length = 441
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK + + L AGISS+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQEGLAISLVSADEV 352
>gi|385792772|ref|YP_005825748.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676918|gb|AEB27788.1| ATP-dependent RNA helicase RhlE [Francisella cf. novicida Fx1]
Length = 442
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK + + L AGISS+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQEGLAISLVSADEV 352
>gi|386015150|ref|YP_005933429.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|386080118|ref|YP_005993643.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
gi|327393211|dbj|BAK10633.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|354989299|gb|AER33423.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
Length = 449
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GI++ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|436834274|ref|YP_007319490.1| ATP-dependent RNA helicase RhlE [Fibrella aestuarina BUZ 2]
gi|384065687|emb|CCG98897.1| ATP-dependent RNA helicase RhlE [Fibrella aestuarina BUZ 2]
Length = 517
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 70/119 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L GI + I+ + AR+ + F+ RVLV TD+AARG
Sbjct: 249 LVFTRTKHGADKVAEFLNKQGIKTEAIHGNKAQNARQRALSNFKERTTRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+ +L VIN+ P + +VHR+GR RAG SG+A S +DE Y D+ +GRK
Sbjct: 309 IDVDNLSHVINFELPNIPESYVHRIGRTGRAGASGIAISFCETDERAYLKDIQKLIGRK 367
>gi|421888857|ref|ZP_16319933.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal)(rhlE-like) [Ralstonia
solanacearum K60-1]
gi|378965799|emb|CCF96681.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal)(rhlE-like) [Ralstonia
solanacearum K60-1]
Length = 597
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAA
Sbjct: 295 QAIVFTATKRDADSLAERLTETGFAAGALHGDMHQGARNRTLTALRRGHLRILVATDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R
Sbjct: 355 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDR 414
Query: 121 K 121
+
Sbjct: 415 R 415
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF++G +L+ TDVA+R
Sbjct: 970 SMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASR 1029
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 1030 GLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKK 1089
>gi|378768016|ref|YP_005196486.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
gi|365187499|emb|CCF10449.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
Length = 449
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GI++ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF++G +L+ TDVA+R
Sbjct: 317 SMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASR 376
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 377 GLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKK 436
>gi|398832639|ref|ZP_10590796.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398222976|gb|EJN09332.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 502
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L + G ++ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 275 VVFTATKRDADTIADRLNIGGFAAAALHGDMHQGARNRTLNSLRRGQVRVLVATDVAARG 334
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P + V NY+ P A+ +VHR+GR RAGR GVA SLV+ E
Sbjct: 335 IDVPGITHVFNYDLPKFAEDYVHRIGRTGRAGRKGVAISLVNHAE 379
>gi|300704701|ref|YP_003746304.1| DEAD/DEAH box helicase [Ralstonia solanacearum CFBP2957]
gi|299072365|emb|CBJ43703.1| modular protein:DEAD/DEAH box helicase (N-terminal); ATP dependant
RNA helicase(C-terminal) (rhlE-like) [Ralstonia
solanacearum CFBP2957]
Length = 603
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAA
Sbjct: 295 QAIVFTATKRDADSLAERLTETGFAAGALHGDMHQGARNRTLTALRRGHLRILVATDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R
Sbjct: 355 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDR 414
Query: 121 K 121
+
Sbjct: 415 R 415
>gi|208779218|ref|ZP_03246564.1| dead/deah box helicase domain protein [Francisella novicida FTG]
gi|208745018|gb|EDZ91316.1| dead/deah box helicase domain protein [Francisella novicida FTG]
Length = 441
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK + + L AGISS+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQEGLAISLVSADEV 352
>gi|386334065|ref|YP_006030236.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
gi|334196515|gb|AEG69700.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
Length = 599
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAA
Sbjct: 295 QAIVFTATKRDADSLAERLTETGFAAGALHGDMHQGARNRTLTALRRGHLRILVATDVAA 354
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R
Sbjct: 355 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDR 414
Query: 121 K 121
+
Sbjct: 415 R 415
>gi|329847732|ref|ZP_08262760.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
gi|328842795|gb|EGF92364.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
Length = 606
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G+ + I+ D + + R+ F+ GK+R LV TD+AAR
Sbjct: 248 TLVFTRTKRSADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFRAGKVRALVATDIAAR 307
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
GID+ ++ VINY P A+ +VHR+GR ARAG+SGV+ +L + DE D+
Sbjct: 308 GIDVDNVSHVINYELPNVAEAYVHRIGRTARAGKSGVSITLCADDERRLLKDI 360
>gi|160898343|ref|YP_001563925.1| DEAD/DEAH box helicase [Delftia acidovorans SPH-1]
gi|160363927|gb|ABX35540.1| DEAD/DEAH box helicase domain protein [Delftia acidovorans SPH-1]
Length = 598
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L IS+ ++ + +AR A F+TG++R LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEFLTKNNISAMALHGNKSQSARTQALAGFKTGELRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 311 IDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMMDIERF 365
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT T + + + +L G + ++ L +AR KF++ +LV TDVAAR
Sbjct: 295 TIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAAR 354
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D V+N++ P +K +VHRVGR ARAG+SGVA S V+ ++ +L + LG+K
Sbjct: 355 GLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKK 414
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT T + + + +L G + ++ L +AR KF++ +LV TDVAAR
Sbjct: 295 TIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAAR 354
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D V+N++ P +K +VHRVGR ARAG+SGVA S V+ ++ +L + LG+K
Sbjct: 355 GLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKK 414
>gi|333991566|ref|YP_004524180.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
gi|333487534|gb|AEF36926.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
Length = 508
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V LG G ++ DL+ AR+ F+TG I VLV TDVAAR
Sbjct: 267 TMIFTRTKRTAQKVADDLGERGFKVGAVHGDLNQVAREKALKAFRTGDIDVLVATDVAAR 326
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
GIDI + V+NY P K +VHR+GR RAG++GVA +LV DEL +
Sbjct: 327 GIDIDDVTHVVNYQCPDDEKTYVHRIGRTGRAGKTGVAVTLVDWDELARW 376
>gi|333915443|ref|YP_004489175.1| DEAD/DEAH box helicase domain-containing protein [Delftia sp.
Cs1-4]
gi|333745643|gb|AEF90820.1| DEAD/DEAH box helicase domain protein [Delftia sp. Cs1-4]
Length = 598
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L IS+ ++ + +AR A F+TG++R LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEFLTKNNISAMALHGNKSQSARTQALAGFKTGELRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAGR G A SLV DE + +D+ F
Sbjct: 311 IDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMMDIERF 365
>gi|408489495|ref|YP_006865864.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
gi|408466770|gb|AFU67114.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
Length = 423
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L A I + I+ + AR A F++G ++VLV TD+A+RG
Sbjct: 247 LVFSRTKHGANKLAKKLEAAKIGAAAIHGNKSQGARTKALAGFKSGSVKVLVATDIASRG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L V+N+ P ++ +VHR+GR RAG SG+A SLVS+DE + D+ +G K
Sbjct: 307 LDIPLLPYVVNFELPNVSEDYVHRIGRTGRAGASGLAVSLVSADETVFLKDIEKLIGDK 365
>gi|453382028|dbj|GAC83496.1| putative ATP-dependent RNA helicase [Gordonia paraffinivorans NBRC
108238]
Length = 565
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G ++ DL AR+ KF+ G I VLV TDVAAR
Sbjct: 292 TMIFTRTKRTAQKVADDLAERGFKVGAVHGDLGQVAREKALKKFRDGSIDVLVATDVAAR 351
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 352 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDELHRWELIDKALGLG 411
>gi|418421660|ref|ZP_12994833.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus subsp.
bolletii BD]
gi|363995576|gb|EHM16793.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus subsp.
bolletii BD]
Length = 490
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ A F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALASFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|255691171|ref|ZP_05414846.1| ATP-dependent RNA helicase RhlE [Bacteroides finegoldii DSM 17565]
gi|260623074|gb|EEX45945.1| DEAD/DEAH box helicase [Bacteroides finegoldii DSM 17565]
Length = 374
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + +ILG AGI S I+ + AR+ F++GK +V+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVRILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTKVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|397680144|ref|YP_006521679.1| DEAD/DEAH box helicase [Mycobacterium massiliense str. GO 06]
gi|418247300|ref|ZP_12873686.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus 47J26]
gi|420932781|ref|ZP_15396056.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-151-0930]
gi|420939192|ref|ZP_15402461.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-152-0914]
gi|420943042|ref|ZP_15406298.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-153-0915]
gi|420947080|ref|ZP_15410330.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-154-0310]
gi|420953190|ref|ZP_15416432.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0626]
gi|420957364|ref|ZP_15420599.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0107]
gi|420963961|ref|ZP_15427185.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-1231]
gi|420993312|ref|ZP_15456458.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0307]
gi|420999085|ref|ZP_15462220.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0912-R]
gi|421003608|ref|ZP_15466730.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0912-S]
gi|353451793|gb|EHC00187.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus 47J26]
gi|392137540|gb|EIU63277.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-151-0930]
gi|392144707|gb|EIU70432.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-152-0914]
gi|392148139|gb|EIU73857.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-153-0915]
gi|392152103|gb|EIU77810.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0626]
gi|392154110|gb|EIU79816.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
1S-154-0310]
gi|392177867|gb|EIV03520.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0912-R]
gi|392179414|gb|EIV05066.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0307]
gi|392192311|gb|EIV17935.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0912-S]
gi|392246874|gb|EIV72351.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-1231]
gi|392251195|gb|EIV76668.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
2B-0107]
gi|395458409|gb|AFN64072.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
str. GO 06]
Length = 490
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ A F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALASFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|365871471|ref|ZP_09411012.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|414583819|ref|ZP_11440959.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-1215]
gi|420879528|ref|ZP_15342895.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0304]
gi|420884819|ref|ZP_15348179.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0421]
gi|420891794|ref|ZP_15355141.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0422]
gi|420897097|ref|ZP_15360436.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0708]
gi|420901892|ref|ZP_15365223.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0817]
gi|420906999|ref|ZP_15370317.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-1212]
gi|420974173|ref|ZP_15437364.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0921]
gi|421050556|ref|ZP_15513550.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363995274|gb|EHM16492.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392079054|gb|EIU04881.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0422]
gi|392080582|gb|EIU06408.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0421]
gi|392084437|gb|EIU10262.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0304]
gi|392096409|gb|EIU22204.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0708]
gi|392099253|gb|EIU25047.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0817]
gi|392104903|gb|EIU30689.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-1212]
gi|392118971|gb|EIU44739.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-1215]
gi|392162056|gb|EIU87746.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
5S-0921]
gi|392239159|gb|EIV64652.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium massiliense
CCUG 48898]
Length = 490
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ A F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALASFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|381160579|ref|ZP_09869811.1| DNA/RNA helicase, superfamily II [Thiorhodovibrio sp. 970]
gi|380878643|gb|EIC20735.1| DNA/RNA helicase, superfamily II [Thiorhodovibrio sp. 970]
Length = 438
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 71/120 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK+ + + L GIS+ I+ + +AR A F+ G +R LV TD+AAR
Sbjct: 249 TLVFTRTKHGANRLAQQLERDGISAAAIHGNKSQSARTRALADFKRGAVRTLVATDIAAR 308
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DI L V+N+ P A+ +VHR+GR RAG SG A SLVS +E + LGR+
Sbjct: 309 GLDIERLPHVVNFELPNVAEDYVHRIGRTGRAGESGTAVSLVSPEEGSLLAGIERLLGRR 368
>gi|384084915|ref|ZP_09996090.1| DEAD/DEAH box helicase domain-containing protein [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 420
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 70/118 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + K L G+ + I+ D AR A+F+ GK+RVLV TD+AARG
Sbjct: 252 LVFTRTKHGADRLAKHLSQGGMQAMAIHGDKSQGARTRALAEFKEGKVRVLVATDIAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDI L V+NY P + +VHR+GR RAG +G A SLVS DE D+ L R
Sbjct: 312 IDINELPHVVNYELPHVPEDYVHRIGRTGRAGNNGQAVSLVSVDERKQLSDVEKLLKR 369
>gi|308186129|ref|YP_003930260.1| ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
gi|308056639|gb|ADO08811.1| Putative ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
Length = 456
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + LG GI++ I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DI L V+NY P A+ +VHR+GR RA +GVA SLV DE D+ L R+
Sbjct: 309 LDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDIERLLKREI 368
Query: 122 PVLA 125
P LA
Sbjct: 369 PRLA 372
>gi|336172862|ref|YP_004580000.1| DEAD/DEAH box helicase [Lacinutrix sp. 5H-3-7-4]
gi|334727434|gb|AEH01572.1| DEAD/DEAH box helicase domain protein [Lacinutrix sp. 5H-3-7-4]
Length = 444
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K + +GI++ I+ + AR F+ G IRV+V TD+AARG
Sbjct: 247 LVFTRTKHGANKLTKKMISSGITAAAIHGNKSQGARTKALKGFKDGTIRVMVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP L VIN+ P ++ +VHR+GR RAG G A SLVS+DE Y D+ +G K
Sbjct: 307 LDIPLLPHVINFEIPNISEDYVHRIGRTGRAGAKGEAISLVSADETQYLRDIEKLIGEK 365
>gi|167628011|ref|YP_001678511.1| ATP-dependent RNA helicase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598012|gb|ABZ88010.1| ATP-dependent RNA helicase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 445
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L AGI+S+ I+ + TAR A F++ I VLV TD+AARG
Sbjct: 247 LVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKDINVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L VIN + P A+ +VHR+GR RAG+ G+A SLVS+DE+
Sbjct: 307 IDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEV 352
>gi|329900791|ref|ZP_08272595.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327549380|gb|EGF33948.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 468
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 274 VVFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGMRRGQVRVLVATDVAARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P + +VHR+GR RAGR+G+A SLV+ E
Sbjct: 334 IDVPAITHVFNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAE 378
>gi|152992886|ref|YP_001358607.1| ATP-dependent RNA helicase [Sulfurovum sp. NBC37-1]
gi|151424747|dbj|BAF72250.1| ATP-dependent RNA helicase [Sulfurovum sp. NBC37-1]
Length = 457
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 69/116 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K L AGIS+ I+ + AR A F+ +IRVLV TD+AARG
Sbjct: 248 LVFTRTKHGANRLTKQLEEAGISAAAIHGNKSQGARTKALASFKANEIRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
IDI L V+NY P + +VHR+GR RAG+SG A SLV DE D+ F+
Sbjct: 308 IDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGQSGEAVSLVCVDEHKLLFDIEKFI 363
>gi|126175663|ref|YP_001051812.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|125998868|gb|ABN62943.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
Length = 526
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 258 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 318 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 375
>gi|160874026|ref|YP_001553342.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|160859548|gb|ABX48082.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
Length = 525
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 258 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 318 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 375
>gi|331694934|ref|YP_004331173.1| DEAD/DEAH box helicase domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326949623|gb|AEA23320.1| DEAD/DEAH box helicase domain protein [Pseudonocardia dioxanivorans
CB1190]
Length = 621
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F TK V+ V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 355 LTMIFARTKRTVQRVADDLAERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 414
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P AK +VHR+GR RAG+ GVA +LV DE+ +
Sbjct: 415 RGIDVTDVTHVINYQCPEDAKTYVHRIGRTGRAGKEGVAVTLVDWDEMPRW 465
>gi|268680470|ref|YP_003304901.1| DEAD/DEAH box helicase [Sulfurospirillum deleyianum DSM 6946]
gi|268618501|gb|ACZ12866.1| DEAD/DEAH box helicase domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 417
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 67/108 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+H V + L GIS++ I+ + +AR A F++G I+VLV TD+AARG
Sbjct: 248 LVFTRTKHHANKVSEYLSKIGISASAIHGNKSQSARTKALADFKSGSIKVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCY 110
+DI L VIN P A+ +VHR+GR RAG G A SLV DE Y
Sbjct: 308 LDIDQLPHVINLELPNIAEDYVHRIGRTGRAGNEGEAISLVCVDEFDY 355
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF++G +L+ TDVA+R
Sbjct: 253 SMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 313 GLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKK 372
>gi|443489827|ref|YP_007367974.1| ATP-dependent RNA helicase RhlE [Mycobacterium liflandii 128FXT]
gi|442582324|gb|AGC61467.1| ATP-dependent RNA helicase RhlE [Mycobacterium liflandii 128FXT]
Length = 517
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G + VLV TDVAAR
Sbjct: 272 TMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALKSFRSGSVNVLVATDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 332 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWTMIDKALGLG 391
>gi|340352522|ref|ZP_08675386.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella pallens
ATCC 700821]
gi|339613492|gb|EGQ18232.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella pallens
ATCC 700821]
Length = 581
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ +RG
Sbjct: 249 IIFSGSKQKVKQIASSLNQKKINCGQMHSDLDQAQRDEMMFKFKSGQIDVLVATDILSRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR-- 120
IDI + VINY+ P A+ +VHR+GR ARA R G+A +LVS D++ + + FL +
Sbjct: 309 IDIDDITMVINYDVPNDAEDYVHRIGRTARADRDGIAITLVSDDDIYNFHQIENFLEKEI 368
Query: 121 -KPVLADDSMKG 131
K L +D KG
Sbjct: 369 EKVSLPEDIGKG 380
>gi|329960847|ref|ZP_08299126.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
gi|328532133|gb|EGF58937.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
Length = 423
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + + L +GI + I+ + AR+ F++ +RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLARTLSKSGIPAEAIHGNKSQNARQRALTGFKSHTLRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG G+A S S+EL Y D+ +G+
Sbjct: 305 IDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLIGKTI 364
Query: 122 PVLAD 126
P++ D
Sbjct: 365 PIIKD 369
>gi|383455776|ref|YP_005369765.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
gi|380732540|gb|AFE08542.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
Length = 484
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V K L AG+ + I+ + AR+ +F+ G +RVLV TD+AARG
Sbjct: 249 LVFTRTKHGANRVAKQLTAAGVRADAIHGNKSQNARERALDEFRAGTLRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L V NY+ P + +VHR+GR RAG SG A S S+E Y D+ + R
Sbjct: 309 IDIDGLSHVFNYDLPNVPEQYVHRIGRTGRAGASGQAVSFCDSEERAYLRDIERTIRRSV 368
Query: 122 PVLADDSMKGKI 133
PV+AD + + +
Sbjct: 369 PVVADAAFRSHL 380
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK+ + K L +GI++ I+ D AR+ + F++G++RVLV TD+AAR
Sbjct: 248 TLVFTRTKHGADRGAKYLNKSGITAAAIHGDKSQGARQTALSNFKSGRLRVLVATDIAAR 307
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
GIDI L VIN++ P + +VHR+GR RAG G A S +E Y D+ G+
Sbjct: 308 GIDIEELSCVINFDLPNVPETYVHRIGRTGRAGLGGRAISFSDIEEKAYVKDIEKLTGK 366
>gi|183981369|ref|YP_001849660.1| ATP-dependent RNA helicase RhlE [Mycobacterium marinum M]
gi|183174695|gb|ACC39805.1| ATP-dependent RNA helicase RhlE [Mycobacterium marinum M]
Length = 517
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G + VLV TDVAAR
Sbjct: 272 TMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALKSFRSGSVNVLVATDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 332 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWTMIDKALGLG 391
>gi|152999406|ref|YP_001365087.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|151364024|gb|ABS07024.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
Length = 525
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 258 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 318 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 375
>gi|423302506|ref|ZP_17280528.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
gi|408470382|gb|EKJ88916.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
Length = 374
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK++ + + +ILG AGI S I+ + AR+ F++GK +V+V TD+A+RG
Sbjct: 248 LIFSRTKHNADKIVRILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTKVMVATDIASRG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI L VINY+ P + +VHR+GR RAG G A + S +E D+ G+K
Sbjct: 308 IDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLVNDIQKLTGKKL 367
Query: 123 VLAD 126
AD
Sbjct: 368 NKAD 371
>gi|403720926|ref|ZP_10944236.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
gi|403207467|dbj|GAB88567.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
Length = 529
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V LG G S ++ DL AR+ +F+ G I VLV TDVAAR
Sbjct: 274 TMIFTRTKRTAQKVADDLGERGFSVGAVHGDLGQVAREKALKRFRNGDIDVLVATDVAAR 333
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K ++HR+GR RAGR+G A +LV DEL + ++ L LG
Sbjct: 334 GIDIDDVTHVINYQCPDDDKTYIHRIGRTGRAGRTGTAITLVDWDELHRWELINTALGLG 393
>gi|326794221|ref|YP_004312041.1| DEAD/DEAH box helicase [Marinomonas mediterranea MMB-1]
gi|326544985|gb|ADZ90205.1| DEAD/DEAH box helicase domain protein [Marinomonas mediterranea
MMB-1]
Length = 453
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + V + L GIS+ ++SD R +F+ +I +LV TDVAARG
Sbjct: 274 IVFTNTKKNADLVAQALNQDGISAGALHSDRTQDERIHVFDQFKNNEISILVATDVAARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI +L VINY+ P ++ ++HR+GR RAG +G A+S+ S+DE LD+ G+K
Sbjct: 334 IDIQNLPLVINYDLPKVSEDYIHRIGRTGRAGHAGQAFSIASADEFDALLDIEALTGKK 392
>gi|399019649|ref|ZP_10721795.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398097540|gb|EJL87844.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 477
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G++RVLV TDVAARG
Sbjct: 272 VVFTATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGMRRGQVRVLVATDVAARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+P + V NY+ P + +VHR+GR RAGR+GVA SLV+ E + + F ++P
Sbjct: 332 IDVPGITHVFNYDLPKFPEDYVHRIGRTGRAGRNGVAVSLVNHAEGMHVKRIERFT-KQP 390
Query: 123 VLAD 126
+ D
Sbjct: 391 IPVD 394
>gi|408792586|ref|ZP_11204196.1| DEAD/DEAH box helicase [Leptospira meyeri serovar Hardjo str. Went
5]
gi|408463996|gb|EKJ87721.1| DEAD/DEAH box helicase [Leptospira meyeri serovar Hardjo str. Went
5]
Length = 471
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK+ + ++L +GI + I+ + +AR+ F++GK R LV TD+AAR
Sbjct: 252 TIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQKALEDFRSGKNRALVATDLAAR 311
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
GIDI + VINY P + +VHR+GR ARAG++G+A ++ +DE D+ +G
Sbjct: 312 GIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLIKDIEKVIG 369
>gi|330813838|ref|YP_004358077.1| cold-shock DEAD-box protein A [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486933|gb|AEA81338.1| cold-shock DEAD-box protein A [Candidatus Pelagibacter sp.
IMCC9063]
Length = 558
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK++ + + K L G S ++ +L R AKF+ KI VLV TD+AAR
Sbjct: 242 TLVFVKTKHNAKKLAKNLEKEGFESDSLHGNLRQNKRNQVIAKFRANKIHVLVATDIAAR 301
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYY 111
G+DIP ++ V+N++ P +A+ F+HR+GR RAG SG A+S V+ SD+ ++
Sbjct: 302 GLDIPHIEHVVNFDLPQQAEDFIHRMGRTGRAGASGTAWSFVTPSDKRKWH 352
>gi|226365826|ref|YP_002783609.1| ATP-dependent RNA helicase [Rhodococcus opacus B4]
gi|226244316|dbj|BAH54664.1| putative ATP-dependent RNA helicase [Rhodococcus opacus B4]
Length = 534
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL+ AR+ F++GKI VLV TDVAAR
Sbjct: 294 TMIFTRTKRTAQKVSDELAERGFAVGSVHGDLNQVAREKALKAFRSGKIDVLVATDVAAR 353
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 354 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALGLG 413
>gi|149187764|ref|ZP_01866061.1| ATP-dependent RNA helicase [Vibrio shilonii AK1]
gi|148838644|gb|EDL55584.1| ATP-dependent RNA helicase [Vibrio shilonii AK1]
Length = 430
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI++ I D AR+ F++GK+R L+ TDVAARG
Sbjct: 263 LVFTKTKQGSDALAKELKLDGINAVSINGDKSQGARQKALDDFKSGKVRALIATDVAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N+ P KA+ ++HR+GR RAG +G A SL+S DE
Sbjct: 323 LDIQQLEQVVNFELPYKAEDYIHRIGRTGRAGHAGFAVSLMSHDE 367
>gi|408675131|ref|YP_006874879.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
gi|387856755|gb|AFK04852.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
Length = 435
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K+L I + I+ + AR+ F++ + RVLV TD+AARG
Sbjct: 250 LVFTRTKHGADKVVKMLSGKNIKAEAIHGNKAQNARQRALNNFKSKETRVLVATDIAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P + +VHR+GR RAG +G+A+S ++EL Y D+ +G+K
Sbjct: 310 IDVDDLAYVINYEIPNIPETYVHRIGRTGRAGSNGIAFSFCENEELTYLKDIQRLIGKKI 369
Query: 122 PVLAD 126
PV+ +
Sbjct: 370 PVIEE 374
>gi|83745783|ref|ZP_00942840.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|207743697|ref|YP_002260089.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
gi|83727473|gb|EAP74594.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|206595096|emb|CAQ62023.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
Length = 631
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAARG
Sbjct: 329 IVFTATKRDADSLAERLTETGFAAGALHGDMHQGARNRTLTALRRGHLRILVATDVAARG 388
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 389 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 447
>gi|378707268|ref|YP_005272162.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418024343|ref|ZP_12663326.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|315266257|gb|ADT93110.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353536303|gb|EHC05862.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 514
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 364
>gi|397169678|ref|ZP_10493110.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
aestuarii B11]
gi|396088982|gb|EJI86560.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
aestuarii B11]
Length = 424
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK+ + + K L G+++ I+ D AR+ +F+ GK+R+LV TD+AARG
Sbjct: 248 LIFVRTKHGADRLAKQLQKDGLTTAAIHGDKAQGARQRTLDEFKQGKVRILVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+NY+ P A+ +VHR+GR RAG SGVA +LV DEL D+
Sbjct: 308 LDISELPYVVNYDLPQVAEDYVHRIGRTGRAGLSGVAVTLVGPDELGALQDI 359
>gi|421899355|ref|ZP_16329720.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206590561|emb|CAQ37523.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
Length = 633
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAARG
Sbjct: 329 IVFTATKRDADSLAERLTETGFAAGALHGDMHQGARNRTLTALRRGHLRILVATDVAARG 388
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+P + V+N++ P +A+ +VHR+GR RAGRSG+A +LV+ + + + F+ R+
Sbjct: 389 IDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRR 447
>gi|399077018|ref|ZP_10752254.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
gi|398036112|gb|EJL29334.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
Length = 663
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 72/120 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V+ V K L G + I+ DLD + R A F+ G +++LV +DVAARG
Sbjct: 250 IVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRMKTLAAFRDGSLKILVASDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP++ V NY+ P A +VHR+GR RAGRSG+AY LV+ + + ++ +G P
Sbjct: 310 LDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGIAYMLVTPADDKGFDKVVKLIGSAP 369
>gi|386342411|ref|YP_006038777.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|334864812|gb|AEH15283.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 515
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 364
>gi|115400041|ref|XP_001215609.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
gi|114191275|gb|EAU32975.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
Length = 360
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 77/121 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
M ++FT T + + + +L G + I+ L +AR + KF+ +L+ TDVAA
Sbjct: 183 MGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRNLLIATDVAA 242
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP++D V+NY+ P +K ++HRVGR ARAG+SG+A+S V+ E+ +L + LG+
Sbjct: 243 RGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELWLRIEDALGK 302
Query: 121 K 121
K
Sbjct: 303 K 303
>gi|73540622|ref|YP_295142.1| helicase [Ralstonia eutropha JMP134]
gi|72118035|gb|AAZ60298.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Ralstonia
eutropha JMP134]
Length = 632
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +RVLV TDVAA
Sbjct: 314 QAIVFTATKRDADSLAERLSDTGFAAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAA 373
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+P + V+N++ P +A+ +VHR+GR RAGRSGVA +LV+ ++ +
Sbjct: 374 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHNDTFQW 424
>gi|308370192|ref|ZP_07420594.2| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu002]
gi|308378233|ref|ZP_07481964.2| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu009]
gi|308380612|ref|ZP_07490534.2| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu011]
gi|308406085|ref|ZP_07669502.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu012]
gi|424948846|ref|ZP_18364542.1| ATP-dependent RNA helicase [Mycobacterium tuberculosis NCGM2209]
gi|308325014|gb|EFP13865.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu002]
gi|308353157|gb|EFP42008.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu009]
gi|308360899|gb|EFP49750.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu011]
gi|308364543|gb|EFP53394.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu012]
gi|358233361|dbj|GAA46853.1| ATP-dependent RNA helicase [Mycobacterium tuberculosis NCGM2209]
Length = 524
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 270 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 329
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 330 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 389
>gi|254506544|ref|ZP_05118685.1| ATP-dependent rna helicase, dead box family [Vibrio
parahaemolyticus 16]
gi|219550417|gb|EED27401.1| ATP-dependent rna helicase, dead box family [Vibrio
parahaemolyticus 16]
Length = 419
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F+ GKIR L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALVKELKLDGIKAASINGDKSQGARQKALDDFKAGKIRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYL 112
+DI L+ V+N++ P KA+ +VHR+GR RAG+ G A S +S DE +YL
Sbjct: 312 LDIQELEQVVNFDMPYKAEDYVHRIGRTGRAGKEGFAVSFMSRDE--HYL 359
>gi|85373802|ref|YP_457864.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
gi|84786885|gb|ABC63067.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
Length = 492
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI S I+ + R+ +F+ K +L+ TDVAARG
Sbjct: 256 LVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKRAKTPILIATDVAARG 315
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDIP + VINY P + +VHR+GR ARAG+ GVA + + DE Y D+
Sbjct: 316 IDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDI 367
>gi|31794389|ref|NP_856882.1| ATP-dependent RNA helicase RhlE [Mycobacterium bovis AF2122/97]
gi|31619985|emb|CAD95329.1| PROBABLE ATP-DEPENDENT RNA HELICASE RHLE [Mycobacterium bovis
AF2122/97]
Length = 527
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 392
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 77/120 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T ++ +L G+ + I + + R KF+ G+ +L+ TDVA+R
Sbjct: 255 SMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRLGALNKFKAGECNILICTDVASR 314
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ E+ +++ + +G+K
Sbjct: 315 GLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEVEWFIQIEKLIGKK 374
>gi|433636303|ref|YP_007269930.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070017]
gi|432167896|emb|CCK65418.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070017]
Length = 527
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 392
>gi|217972086|ref|YP_002356837.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|217497221|gb|ACK45414.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
Length = 515
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 364
>gi|15610347|ref|NP_217727.1| Probable ATP-dependent RNA helicase RhlE [Mycobacterium
tuberculosis H37Rv]
gi|15842798|ref|NP_337835.1| ATP-dependent RNA helicase DeaD [Mycobacterium tuberculosis
CDC1551]
gi|121639098|ref|YP_979322.1| ATP-dependent RNA helicase rhlE [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148663072|ref|YP_001284595.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis H37Ra]
gi|148824410|ref|YP_001289164.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis F11]
gi|167968329|ref|ZP_02550606.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis H37Ra]
gi|224991590|ref|YP_002646279.1| ATP-dependent RNA helicase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800250|ref|YP_003033251.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
1435]
gi|254233823|ref|ZP_04927148.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis C]
gi|254365837|ref|ZP_04981882.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis str.
Haarlem]
gi|254552311|ref|ZP_05142758.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289444785|ref|ZP_06434529.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis T46]
gi|289448897|ref|ZP_06438641.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis CPHL_A]
gi|289575929|ref|ZP_06456156.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis K85]
gi|289747027|ref|ZP_06506405.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
02_1987]
gi|289755331|ref|ZP_06514709.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis EAS054]
gi|289759347|ref|ZP_06518725.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis T85]
gi|294993850|ref|ZP_06799541.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis 210]
gi|297635860|ref|ZP_06953640.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
4207]
gi|297732857|ref|ZP_06961975.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
R506]
gi|298526689|ref|ZP_07014098.1| ATP-dependent RNA helicase DeaD [Mycobacterium tuberculosis
94_M4241A]
gi|306777536|ref|ZP_07415873.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu001]
gi|306786080|ref|ZP_07424402.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu003]
gi|306790447|ref|ZP_07428769.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu004]
gi|306794968|ref|ZP_07433270.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu005]
gi|306799169|ref|ZP_07437471.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu006]
gi|306805014|ref|ZP_07441682.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu008]
gi|306809200|ref|ZP_07445868.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu007]
gi|306973655|ref|ZP_07486316.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu010]
gi|313660190|ref|ZP_07817070.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
V2475]
gi|339633219|ref|YP_004724861.1| ATP-dependent RNA helicase RHLE [Mycobacterium africanum GM041182]
gi|340628189|ref|YP_004746641.1| putative ATP-dependent RNA HELICASE RHLE [Mycobacterium canettii
CIPT 140010059]
gi|375297480|ref|YP_005101747.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
4207]
gi|378772957|ref|YP_005172690.1| putative ATP-dependent RNA helicase [Mycobacterium bovis BCG str.
Mexico]
gi|383308951|ref|YP_005361762.1| putative ATP-dependent RNA helicase RHLE [Mycobacterium
tuberculosis RGTB327]
gi|385992459|ref|YP_005910757.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis
CCDC5180]
gi|385996088|ref|YP_005914386.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis
CCDC5079]
gi|385999997|ref|YP_005918296.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis CTRI-2]
gi|392387832|ref|YP_005309461.1| rhlE [Mycobacterium tuberculosis UT205]
gi|392433690|ref|YP_006474734.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
605]
gi|397675148|ref|YP_006516683.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis H37Rv]
gi|422814297|ref|ZP_16862662.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
CDC1551A]
gi|424803284|ref|ZP_18228715.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis W-148]
gi|433628343|ref|YP_007261972.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140060008]
gi|433643401|ref|YP_007289160.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070008]
gi|449065314|ref|YP_007432397.1| ATP-dependent RNA helicase RhlE [Mycobacterium bovis BCG str. Korea
1168P]
gi|13883125|gb|AAK47649.1| ATP-dependent RNA helicase DeaD [Mycobacterium tuberculosis
CDC1551]
gi|121494746|emb|CAL73227.1| Probable ATP-dependent RNA helicase rhlE [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124599352|gb|EAY58456.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis C]
gi|134151350|gb|EBA43395.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis str.
Haarlem]
gi|148507224|gb|ABQ75033.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis H37Ra]
gi|148722937|gb|ABR07562.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis F11]
gi|224774705|dbj|BAH27511.1| putative ATP-dependent RNA helicase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321753|gb|ACT26356.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
1435]
gi|289417704|gb|EFD14944.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis T46]
gi|289421855|gb|EFD19056.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis CPHL_A]
gi|289540360|gb|EFD44938.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis K85]
gi|289687555|gb|EFD55043.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
02_1987]
gi|289695918|gb|EFD63347.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis EAS054]
gi|289714911|gb|EFD78923.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis T85]
gi|298496483|gb|EFI31777.1| ATP-dependent RNA helicase DeaD [Mycobacterium tuberculosis
94_M4241A]
gi|308214084|gb|EFO73483.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu001]
gi|308329234|gb|EFP18085.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu003]
gi|308333066|gb|EFP21917.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu004]
gi|308336752|gb|EFP25603.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu005]
gi|308340590|gb|EFP29441.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu006]
gi|308344527|gb|EFP33378.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu007]
gi|308348323|gb|EFP37174.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu008]
gi|308356899|gb|EFP45750.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
SUMu010]
gi|323718078|gb|EGB27260.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis
CDC1551A]
gi|326902560|gb|EGE49493.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis W-148]
gi|328459985|gb|AEB05408.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
4207]
gi|339296042|gb|AEJ48153.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis
CCDC5079]
gi|339299652|gb|AEJ51762.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis
CCDC5180]
gi|339332575|emb|CCC28290.1| putative ATP-dependent RNA helicase RHLE [Mycobacterium africanum
GM041182]
gi|340006379|emb|CCC45559.1| putative ATP-dependent RNA HELICASE RHLE [Mycobacterium canettii
CIPT 140010059]
gi|341603137|emb|CCC65815.1| probable ATP-dependent RNA helicase rhlE [Mycobacterium bovis BCG
str. Moreau RDJ]
gi|344221044|gb|AEN01675.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis CTRI-2]
gi|356595278|gb|AET20507.1| Putative ATP-dependent RNA helicase [Mycobacterium bovis BCG str.
Mexico]
gi|378546383|emb|CCE38662.1| rhlE [Mycobacterium tuberculosis UT205]
gi|379029565|dbj|BAL67298.1| ATP-dependent RNA helicase RhlE [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380722904|gb|AFE18013.1| putative ATP-dependent RNA helicase RHLE [Mycobacterium
tuberculosis RGTB327]
gi|392055099|gb|AFM50657.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis KZN
605]
gi|395140053|gb|AFN51212.1| ATP-dependent RNA helicase rhlE [Mycobacterium tuberculosis H37Rv]
gi|432155949|emb|CCK53200.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140060008]
gi|432159949|emb|CCK57264.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070008]
gi|440582695|emb|CCG13098.1| putative ATP-DEPENDENT RNA HELICASE RHLE [Mycobacterium
tuberculosis 7199-99]
gi|444896763|emb|CCP46027.1| Probable ATP-dependent RNA helicase RhlE [Mycobacterium
tuberculosis H37Rv]
gi|449033822|gb|AGE69249.1| ATP-dependent RNA helicase RhlE [Mycobacterium bovis BCG str. Korea
1168P]
Length = 527
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 392
>gi|399926673|ref|ZP_10784031.1| DEAD/DEAH box helicase [Myroides injenensis M09-0166]
Length = 414
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 72/125 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V + L GI++ + D TAR+ F+ +++VLV TD+AARG
Sbjct: 248 LVFTRTKNGADAVVEHLLKNGINAACFHGDKSQTAREEALNNFKNKEVKVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI SL VINY+ P + FVHR+GR RAG GVA S E Y+ D++ F +P
Sbjct: 308 IDIDSLPCVINYDLPNIPETFVHRIGRTGRAGNEGVAISFCDKSEKTYWQDIVKFTRSQP 367
Query: 123 VLADD 127
+ D
Sbjct: 368 KIITD 372
>gi|289571435|ref|ZP_06451662.1| LOW QUALITY PROTEIN: ATP-dependent RNA helicase rhlE [Mycobacterium
tuberculosis T17]
gi|289545189|gb|EFD48837.1| LOW QUALITY PROTEIN: ATP-dependent RNA helicase rhlE [Mycobacterium
tuberculosis T17]
Length = 489
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 392
>gi|85057334|ref|YP_456250.1| superfamily II DNA/RNA helicase [Aster yellows witches'-broom
phytoplasma AYWB]
gi|84789439|gb|ABC65171.1| superfamily II DNA and RNA helicase [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 547
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK V+ + L G + ++ DL R+ F+ GKI++L+ TDVAAR
Sbjct: 245 TILFANTKKDVDEITAYLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAAR 304
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DI + VINY+ P + +++VHR+GR RAG+ G+AYSL+S ++ L +L K
Sbjct: 305 GLDISDIKMVINYDLPHEDEVYVHRIGRTGRAGKKGLAYSLISPRKVSQLKKLEYYLKEK 364
Query: 122 PVLAD 126
L D
Sbjct: 365 ITLLD 369
>gi|402773718|ref|YP_006593255.1| DEAD/DEAH box helicase [Methylocystis sp. SC2]
gi|401775738|emb|CCJ08604.1| DEAD/DEAH box helicase domain protein [Methylocystis sp. SC2]
Length = 514
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 75/118 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V +H+ L G S+ ++ D+D AR + F+TG + ++V +DVAARG
Sbjct: 248 IIFCNRKRDVATLHRSLVKHGFSAGALHGDMDQLARMASLDAFKTGDVSLIVCSDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DIP + V+N++ P ++ +VHR+GR RAGRSGVA +LV+ D++ Y + +G+
Sbjct: 308 LDIPDVSHVLNFDVPTHSEDYVHRIGRTGRAGRSGVAITLVTEDDMKYIDQIQSLIGK 365
>gi|330830109|ref|YP_004393061.1| DEAD box family ATP-dependent RNA helicase [Aeromonas veronii B565]
gi|406676609|ref|ZP_11083795.1| hypothetical protein HMPREF1170_02003 [Aeromonas veronii AMC35]
gi|423201999|ref|ZP_17188578.1| hypothetical protein HMPREF1167_02161 [Aeromonas veronii AER39]
gi|423209186|ref|ZP_17195740.1| hypothetical protein HMPREF1169_01258 [Aeromonas veronii AER397]
gi|328805245|gb|AEB50444.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas veronii
B565]
gi|404615610|gb|EKB12572.1| hypothetical protein HMPREF1167_02161 [Aeromonas veronii AER39]
gi|404619031|gb|EKB15951.1| hypothetical protein HMPREF1169_01258 [Aeromonas veronii AER397]
gi|404626832|gb|EKB23642.1| hypothetical protein HMPREF1170_02003 [Aeromonas veronii AMC35]
Length = 431
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 11/168 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ + R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDVLVEELNLDGIKSAVVHGEKAQGNRRRALREFMEGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L+ V+NY+ P A+ +VHR+GR RAG+ G+A S VS +E L++ +G+K
Sbjct: 308 LDIPDLEYVVNYDLPFLAEDYVHRIGRTGRAGKRGMAISFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL 161
V + D + +++ + FGK PQ ++ ++++M +L
Sbjct: 368 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ-REDNAVAQVMAEAKL 413
>gi|373950799|ref|ZP_09610760.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386323368|ref|YP_006019485.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333817513|gb|AEG10179.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373887399|gb|EHQ16291.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 515
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI + I+ + TAR A F+ G+ RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVS++E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDIERLINR 364
>gi|260798638|ref|XP_002594307.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
gi|229279540|gb|EEN50318.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
Length = 563
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK +H ILGL G++ ++ +L T R +F+ ++ VL+ TD+AARG
Sbjct: 242 IVFIQTKLQAHRMHIILGLLGLNVGELHGNLSQTQRLETLKRFKDAEVDVLLATDLAARG 301
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DI + VIN+ P K ++HRVGR ARAG+SG A +LV E Y D++ R P
Sbjct: 302 LDIQGVKTVINFTMPSTLKHYIHRVGRTARAGKSGRAVTLVGEKERRYLKDVVKN-ARNP 360
Query: 123 VLADDSMKGKIRHQDGMF---GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNA 175
V K ++ Q+ + KI + ME ++EI+ + +M + N A
Sbjct: 361 V------KSRVVPQEVILKYRDKIEK--MEKDVAEILRLEAEEKEMASTENKMNRA 408
>gi|433632307|ref|YP_007265935.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070010]
gi|432163900|emb|CCK61329.1| Putative ATP-dependent RNA helicase RhlE [Mycobacterium canettii
CIPT 140070010]
Length = 527
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 392
>gi|410617786|ref|ZP_11328751.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola polaris LMG
21857]
gi|410162917|dbj|GAC32889.1| DEAD-box ATP-dependent RNA helicase cshA [Glaciecola polaris LMG
21857]
Length = 435
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI+S I+ + AR A+F++GK+ LV TD+AARG
Sbjct: 247 LVFSRTKHGANRISKQLEARGITSAAIHGNKSQGARTKALAEFKSGKVCALVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
+DI L V+NY+ P A+ +VHR+GR RAG SG A SLV++DE D+ F
Sbjct: 307 LDISQLPQVVNYDLPNVAEDYVHRIGRTGRAGASGQAISLVTADEFPLLADIERF 361
>gi|423207165|ref|ZP_17193721.1| hypothetical protein HMPREF1168_03356 [Aeromonas veronii AMC34]
gi|404621114|gb|EKB18006.1| hypothetical protein HMPREF1168_03356 [Aeromonas veronii AMC34]
Length = 431
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 11/168 (6%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +T+ + + + L L GI S ++ + R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFASTRESCDVLVEELNLDGIKSAVVHGEKAQGNRRRALREFMEGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP L+ V+NY+ P A+ +VHR+GR RAG+ G+A S VS +E L++ +G+K
Sbjct: 308 LDIPDLEYVVNYDLPFLAEDYVHRIGRTGRAGKRGMAISFVSREEERTLLEIEALIGQKI 367
Query: 122 --------PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL 161
V + D + +++ + FGK PQ ++ ++++M +L
Sbjct: 368 RRIMVPGYEVSSRDELIKQLQERR-RFGKRPQ-REDNAVAQVMAEAKL 413
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 76/120 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + + R + KF++G+ +L+ TDVA+R
Sbjct: 253 SMVFTCTCDATRLLALILRNLGLKAIPINGHMSQSKRLGASNKFKSGECNILLCTDVASR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGR GVA SLV+ EL +Y+ + +G K
Sbjct: 313 GLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRFGVAISLVNQYELGWYIQIEKLIGNK 372
>gi|261212516|ref|ZP_05926801.1| ATP-dependent RNA helicase [Vibrio sp. RC341]
gi|260838447|gb|EEX65103.1| ATP-dependent RNA helicase [Vibrio sp. RC341]
Length = 422
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 77/121 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
M ++FT T + + + +L G + I+ L +AR + KF+ +L+ TDVAA
Sbjct: 268 MGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRNLLIATDVAA 327
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RG+DIP++D V+NY+ P +K ++HRVGR ARAG+SG+A+S V+ E+ +L + LG+
Sbjct: 328 RGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELWLRIEDALGK 387
Query: 121 K 121
K
Sbjct: 388 K 388
>gi|409389025|ref|ZP_11240906.1| putative ATP-dependent RNA helicase, partial [Gordonia
rubripertincta NBRC 101908]
gi|403200866|dbj|GAB84140.1| putative ATP-dependent RNA helicase, partial [Gordonia
rubripertincta NBRC 101908]
Length = 429
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G ++ DL AR+ +F+ G I VLV TDVAAR
Sbjct: 168 TMIFTRTKRTAQKVADDLAERGFKVGAVHGDLGQVAREKALGRFRNGTIDVLVATDVAAR 227
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 228 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRWELIDKALGLG 287
>gi|289751901|ref|ZP_06511279.1| LOW QUALITY PROTEIN: ATP-dependent RNA helicase rhlE [Mycobacterium
tuberculosis T92]
gi|289692488|gb|EFD59917.1| LOW QUALITY PROTEIN: ATP-dependent RNA helicase rhlE [Mycobacterium
tuberculosis T92]
Length = 328
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 170 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 229
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 230 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLG 289
>gi|146163668|ref|XP_001012102.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146145909|gb|EAR91857.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 533
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++F T + + +L G S+ I+ + R KF++G+ ++LV TDVA+R
Sbjct: 338 SIIFVQTCLNAIKLTLMLRNLGFSAVTIHGQMSQVKRLGAINKFKSGEKKILVATDVASR 397
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIPS+D VINY+ P AK +VHRVGR ARAGR+G A S V+ ++ YL + +G+K
Sbjct: 398 GLDIPSVDLVINYDIPTNAKEYVHRVGRTARAGRAGKAISFVTQYDVEMYLKIEALIGKK 457
>gi|255034017|ref|YP_003084638.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
gi|254946773|gb|ACT91473.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
18053]
Length = 590
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK V+ + + L L G +S I+ DL R +KF+ G +LV TDVAARG
Sbjct: 250 LVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTILVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ LD VINY+ P + +VHR+GR RAG SG A+SLV+ DE
Sbjct: 310 IDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDE 354
>gi|162451805|ref|YP_001614172.1| hypothetical protein sce3532 [Sorangium cellulosum So ce56]
gi|161162387|emb|CAN93692.1| deaD2 [Sorangium cellulosum So ce56]
Length = 478
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L A I + I+ + AR+ A F+ G VLV TD+AARG
Sbjct: 247 IVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTSVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL-LLFLGRK 121
IDI + VINY+ P + +VHR+GR ARAG SGVA S S+E Y D+ L R
Sbjct: 307 IDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYLADIERLIQKRL 366
Query: 122 PVLAD 126
P+LAD
Sbjct: 367 PLLAD 371
>gi|153830439|ref|ZP_01983106.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
623-39]
gi|229514213|ref|ZP_04403674.1| ATP-dependent RNA helicase [Vibrio cholerae TMA 21]
gi|254285788|ref|ZP_04960751.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
AM-19226]
gi|384423066|ref|YP_005632425.1| ATP-dependent RNA helicase VCA0768 [Vibrio cholerae LMA3984-4]
gi|421349305|ref|ZP_15799674.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-25]
gi|421355813|ref|ZP_15806144.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-45]
gi|424589155|ref|ZP_18028621.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1037(10)]
gi|148874080|gb|EDL72215.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
623-39]
gi|150424285|gb|EDN16223.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
AM-19226]
gi|229348193|gb|EEO13151.1| ATP-dependent RNA helicase [Vibrio cholerae TMA 21]
gi|327485774|gb|AEA80180.1| ATP-dependent RNA helicase VCA0768 [Vibrio cholerae LMA3984-4]
gi|395950483|gb|EJH61102.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-45]
gi|395955922|gb|EJH66516.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-25]
gi|408038333|gb|EKG74682.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1037(10)]
Length = 422
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|153800715|ref|ZP_01955301.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
gi|227812335|ref|YP_002812345.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae M66-2]
gi|229522328|ref|ZP_04411744.1| ATP-dependent RNA helicase [Vibrio cholerae TM 11079-80]
gi|298499563|ref|ZP_07009369.1| ATP-dependent RNA helicase [Vibrio cholerae MAK 757]
gi|417823355|ref|ZP_12469953.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE48]
gi|419836503|ref|ZP_14359943.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46B1]
gi|421343079|ref|ZP_15793483.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43B1]
gi|422306779|ref|ZP_16393951.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1035(8)]
gi|423734981|ref|ZP_17708192.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41B1]
gi|424009367|ref|ZP_17752307.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-44C1]
gi|124123690|gb|EAY42433.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
gi|227011477|gb|ACP07688.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae M66-2]
gi|229340313|gb|EEO05319.1| ATP-dependent RNA helicase [Vibrio cholerae TM 11079-80]
gi|297541544|gb|EFH77595.1| ATP-dependent RNA helicase [Vibrio cholerae MAK 757]
gi|340049485|gb|EGR10401.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE48]
gi|395941646|gb|EJH52323.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43B1]
gi|408625435|gb|EKK98344.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1035(8)]
gi|408630434|gb|EKL03031.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41B1]
gi|408857053|gb|EKL96741.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46B1]
gi|408864391|gb|EKM03834.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-44C1]
Length = 422
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAISLLSHDE 359
>gi|114564231|ref|YP_751745.1| DEAD/DEAH box helicase [Shewanella frigidimarina NCIMB 400]
gi|114335524|gb|ABI72906.1| DEAD/DEAH box helicase domain protein [Shewanella frigidimarina
NCIMB 400]
Length = 433
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 76/118 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F GKIRVLV T+VAARG
Sbjct: 248 LVFTATRDAADKLVKELNLDGIPSGVVHGEKAQGSRRRALREFVEGKIRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI +L+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G+
Sbjct: 308 LDIKNLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQ 365
>gi|374373274|ref|ZP_09630934.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
gi|373234247|gb|EHP54040.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
Length = 412
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TKY + + K L AGI + I+ D ++R+ + F+TG +RVLV TD+AARG
Sbjct: 247 LVFARTKYGADKIAKNLTRAGIRAAAIHGDKTQSSRQRSLLNFKTGAVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI + VINY P + + +VHR+GR RAG +G A S +E Y D+ + +
Sbjct: 307 IDIDDMGYVINYELPNQPETYVHRIGRTGRAGAAGTAISFCDYEEKIYLRDIQKLIKQTI 366
Query: 122 PVLADDSMKGKIRH 135
PV+ D + H
Sbjct: 367 PVVKDHPFDVPLMH 380
>gi|354616053|ref|ZP_09033745.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353219600|gb|EHB84147.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GKI VLV TDVAA
Sbjct: 255 LTMIFTRTKRTAQKVADDLAERGFAAAAVHGDLGQGAREQALRAFRSGKIDVLVATDVAA 314
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + V+NY P K +VHR+GR RAG++GVA +LV DE+ +
Sbjct: 315 RGIDVEDVTHVVNYQTPDDQKTYVHRIGRTGRAGKTGVALTLVDWDEIPRW 365
>gi|422910220|ref|ZP_16944861.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-09]
gi|424659088|ref|ZP_18096339.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-16]
gi|341633724|gb|EGS58513.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-09]
gi|408053273|gb|EKG88291.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-16]
Length = 422
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|183222181|ref|YP_001840177.1| ATP-dependent RNA helicase RhlE [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912238|ref|YP_001963793.1| superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776914|gb|ABZ95215.1| Superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780603|gb|ABZ98901.1| ATP-dependent RNA helicase RhlE [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK+ + ++L +GI + I+ + +AR+ F++GK R LV TD+AAR
Sbjct: 252 TIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNRALVATDLAAR 311
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
GIDI + VINY P + +VHR+GR ARAG++G+A ++ +DE D+ +G
Sbjct: 312 GIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLIKDIEKVIG 369
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + + IL G + ++ L +AR KF++G +VLV TDVA+RG
Sbjct: 226 IIFTRTVHDAQRLSIILRTLGFPAIPLHGQLSQSARLGALGKFKSGGRKVLVATDVASRG 285
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + +LV+ ++ L + +G+K
Sbjct: 286 LDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTLVTQYDVELVLRIEQVIGKK 344
>gi|153824344|ref|ZP_01977011.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
MZO-2]
gi|254226198|ref|ZP_04919793.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V51]
gi|125621300|gb|EAZ49639.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V51]
gi|149741898|gb|EDM55927.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
MZO-2]
Length = 422
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|334130202|ref|ZP_08504003.1| Putative ATP-dependent RNA helicase [Methyloversatilis universalis
FAM5]
gi|333444734|gb|EGK72679.1| Putative ATP-dependent RNA helicase [Methyloversatilis universalis
FAM5]
Length = 437
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + + LG G + ++ D+ R + G +RVLV TDVAARG
Sbjct: 249 IVFTATKRDADQIAEQLGENGFLAAALHGDMHQGERNRTLGHLRRGALRVLVATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
ID+ + VIN++ P A+ +VHR+GR RAGRSG+A SL S D++
Sbjct: 309 IDVAGISHVINFDLPKSAEDYVHRIGRTGRAGRSGIAVSLASGDDV 354
>gi|90408881|ref|ZP_01217020.1| ATP-dependent RNA helicase, DEAD box family protein [Psychromonas
sp. CNPT3]
gi|90310020|gb|EAS38166.1| ATP-dependent RNA helicase, DEAD box family protein [Psychromonas
sp. CNPT3]
Length = 221
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + + K L L GI + D + AR KF G +RVLV TDVAARG
Sbjct: 38 LVFAGTKASADLLAKELKLDGIKCAVCHGDKNQGARNKAIEKFTEGSVRVLVATDVAARG 97
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP+L V+N++ P A+ ++HR+GR RAG+ G A SLVS + + ++ +GRK
Sbjct: 98 LDIPNLPYVVNFHLPFLAEDYIHRIGRTGRAGKKGNAISLVSPKDEQFLDNIEELIGRK 156
>gi|262190914|ref|ZP_06049130.1| ATP-dependent RNA helicase [Vibrio cholerae CT 5369-93]
gi|297580199|ref|ZP_06942126.1| ATP-dependent RNA helicase [Vibrio cholerae RC385]
gi|422920947|ref|ZP_16954205.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae BJG-01]
gi|429885449|ref|ZP_19367038.1| ATP-dependent RNA helicase [Vibrio cholerae PS15]
gi|262033210|gb|EEY51732.1| ATP-dependent RNA helicase [Vibrio cholerae CT 5369-93]
gi|297535845|gb|EFH74679.1| ATP-dependent RNA helicase [Vibrio cholerae RC385]
gi|341649742|gb|EGS73692.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae BJG-01]
gi|429227802|gb|EKY33784.1| ATP-dependent RNA helicase [Vibrio cholerae PS15]
Length = 422
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAISLLSHDE 359
>gi|405368744|ref|ZP_11026565.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397089457|gb|EJJ20374.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 408
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 70/109 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+ F A++Y ++V L AGI++T ++ +L AR A F+ ++RVLV TDVAARG
Sbjct: 235 LTFVASRYTADHVAMKLNRAGIAATSLHGELSQGARTQALADFKAKRVRVLVATDVAARG 294
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
+DI L AV+NY+ P +VHR+GR RAG +GVA S VS++ ++
Sbjct: 295 LDIAQLPAVVNYDLPRSTVDYVHRIGRTGRAGDTGVAISFVSANTEAHF 343
>gi|417819886|ref|ZP_12466501.1| type III restriction enzyme, res subunit [Vibrio cholerae HE39]
gi|419828579|ref|ZP_14352070.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-1A2]
gi|419833504|ref|ZP_14356965.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A2]
gi|422920186|ref|ZP_16953516.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02A1]
gi|423810507|ref|ZP_17714558.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55C2]
gi|423844400|ref|ZP_17718291.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-59A1]
gi|423875325|ref|ZP_17721963.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-60A1]
gi|423941316|ref|ZP_17732881.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-40]
gi|423973068|ref|ZP_17736426.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-46]
gi|423999805|ref|ZP_17742968.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02C1]
gi|424011635|ref|ZP_17754480.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55B2]
gi|424021465|ref|ZP_17761218.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-59B1]
gi|424626875|ref|ZP_18065296.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A1]
gi|424627766|ref|ZP_18066099.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-51A1]
gi|424631566|ref|ZP_18069759.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-52A1]
gi|424638480|ref|ZP_18076447.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55A1]
gi|424642285|ref|ZP_18080127.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-56A1]
gi|424646892|ref|ZP_18084591.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-57A1]
gi|443525610|ref|ZP_21091768.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-78A1]
gi|340040744|gb|EGR01716.1| type III restriction enzyme, res subunit [Vibrio cholerae HE39]
gi|341631600|gb|EGS56484.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02A1]
gi|408007876|gb|EKG45912.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A1]
gi|408018722|gb|EKG56153.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55A1]
gi|408019538|gb|EKG56935.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-56A1]
gi|408026468|gb|EKG63474.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-52A1]
gi|408039187|gb|EKG75479.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-57A1]
gi|408060232|gb|EKG94934.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-51A1]
gi|408623652|gb|EKK96606.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-1A2]
gi|408637640|gb|EKL09668.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55C2]
gi|408645612|gb|EKL17251.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-60A1]
gi|408646687|gb|EKL18269.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-59A1]
gi|408650828|gb|EKL22103.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A2]
gi|408662729|gb|EKL33635.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-40]
gi|408666670|gb|EKL37448.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-46]
gi|408843905|gb|EKL84044.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02C1]
gi|408862417|gb|EKM01933.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-59B1]
gi|408867598|gb|EKM06956.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55B2]
gi|443456024|gb|ELT19733.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-78A1]
Length = 422
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAISLLSHDE 359
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VFT T + IL G+ + I + R KF++G +L+ TDVA+R
Sbjct: 246 SMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +Y+ + +G+K
Sbjct: 306 GLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKK 365
>gi|15601523|ref|NP_233154.1| DEAD/DEAH box helicase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590875|ref|ZP_01678199.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121728661|ref|ZP_01681679.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V52]
gi|147671636|ref|YP_001215545.1| DEAD/DEAH box helicase [Vibrio cholerae O395]
gi|153818645|ref|ZP_01971312.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC
8457]
gi|153820657|ref|ZP_01973324.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
B33]
gi|227119721|ref|YP_002821616.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O395]
gi|229506074|ref|ZP_04395583.1| ATP-dependent RNA helicase [Vibrio cholerae BX 330286]
gi|229510069|ref|ZP_04399549.1| ATP-dependent RNA helicase [Vibrio cholerae B33]
gi|229605606|ref|YP_002876310.1| ATP-dependent RNA helicase [Vibrio cholerae MJ-1236]
gi|254849928|ref|ZP_05239278.1| ATP-dependent RNA helicase [Vibrio cholerae MO10]
gi|255746472|ref|ZP_05420419.1| ATP-dependent RNA helicase [Vibrio cholera CIRS 101]
gi|262152368|ref|ZP_06028501.1| ATP-dependent RNA helicase [Vibrio cholerae INDRE 91/1]
gi|262168609|ref|ZP_06036305.1| ATP-dependent RNA helicase [Vibrio cholerae RC27]
gi|360037667|ref|YP_004939429.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|379744177|ref|YP_005335229.1| ATP-dependent RNA helicase [Vibrio cholerae IEC224]
gi|417811718|ref|ZP_12458379.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-49A2]
gi|417816978|ref|ZP_12463608.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HCUF01]
gi|418331464|ref|ZP_12942407.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-06A1]
gi|418337875|ref|ZP_12946770.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-23A1]
gi|418345766|ref|ZP_12950545.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-28A1]
gi|418349549|ref|ZP_12954281.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43A1]
gi|418353657|ref|ZP_12956382.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-61A1]
gi|419826271|ref|ZP_14349774.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1033(6)]
gi|421317251|ref|ZP_15767821.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1032(5)]
gi|421320213|ref|ZP_15770771.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1038(11)]
gi|421324258|ref|ZP_15774785.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1041(14)]
gi|421327226|ref|ZP_15777744.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1042(15)]
gi|421332317|ref|ZP_15782796.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1046(19)]
gi|421335957|ref|ZP_15786420.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1048(21)]
gi|421339697|ref|ZP_15790131.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-20A2]
gi|421346096|ref|ZP_15796480.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-46A1]
gi|422889693|ref|ZP_16932164.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-40A1]
gi|422898602|ref|ZP_16935893.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-48A1]
gi|422904652|ref|ZP_16939545.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-70A1]
gi|422913250|ref|ZP_16947766.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HFU-02]
gi|422927660|ref|ZP_16960605.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-38A1]
gi|423144026|ref|ZP_17131643.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-19A1]
gi|423147721|ref|ZP_17135100.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-21A1]
gi|423151508|ref|ZP_17138740.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-22A1]
gi|423156364|ref|ZP_17143467.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-32A1]
gi|423161924|ref|ZP_17148807.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-33A2]
gi|423163024|ref|ZP_17149849.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-48B2]
gi|423732890|ref|ZP_17706134.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-17A1]
gi|423741184|ref|ZP_17710631.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A2]
gi|423892735|ref|ZP_17726414.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-62A1]
gi|423918993|ref|ZP_17729186.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-77A1]
gi|424000506|ref|ZP_17743616.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-17A2]
gi|424004210|ref|ZP_17747217.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-37A1]
gi|424023197|ref|ZP_17762863.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-62B1]
gi|424026790|ref|ZP_17766403.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-69A1]
gi|424588412|ref|ZP_18027909.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1030(3)]
gi|424593161|ref|ZP_18032521.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1040(13)]
gi|424597090|ref|ZP_18036308.1| ATP-dependent RNA helicase rhlE [Vibrio Cholerae CP1044(17)]
gi|424603914|ref|ZP_18042966.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1047(20)]
gi|424604666|ref|ZP_18043654.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1050(23)]
gi|424608492|ref|ZP_18047371.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-39A1]
gi|424615264|ref|ZP_18053981.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-41A1]
gi|424619115|ref|ZP_18057721.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-42A1]
gi|424620030|ref|ZP_18058579.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-47A1]
gi|424643986|ref|ZP_18081743.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-56A2]
gi|424650773|ref|ZP_18088320.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-57A2]
gi|424654553|ref|ZP_18091872.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-81A2]
gi|440711582|ref|ZP_20892223.1| ATP-dependent RNA helicase [Vibrio cholerae 4260B]
gi|443503560|ref|ZP_21070535.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-64A1]
gi|443507470|ref|ZP_21074249.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-65A1]
gi|443510546|ref|ZP_21077214.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-67A1]
gi|443517090|ref|ZP_21083536.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-68A1]
gi|443520742|ref|ZP_21087075.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-71A1]
gi|443522775|ref|ZP_21089019.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-72A2]
gi|443529675|ref|ZP_21095692.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-7A1]
gi|443533366|ref|ZP_21099313.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-80A1]
gi|443537042|ref|ZP_21102900.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-81A1]
gi|449057894|ref|ZP_21736190.1| ATP-dependent RNA helicase [Vibrio cholerae O1 str. Inaba G4222]
gi|9658191|gb|AAF96666.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547282|gb|EAX57403.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121629072|gb|EAX61518.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V52]
gi|126510798|gb|EAZ73392.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC
8457]
gi|126521700|gb|EAZ78923.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
B33]
gi|146314019|gb|ABQ18559.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
O395]
gi|227015171|gb|ACP11380.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O395]
gi|229352514|gb|EEO17454.1| ATP-dependent RNA helicase [Vibrio cholerae B33]
gi|229356425|gb|EEO21343.1| ATP-dependent RNA helicase [Vibrio cholerae BX 330286]
gi|229372092|gb|ACQ62514.1| ATP-dependent RNA helicase [Vibrio cholerae MJ-1236]
gi|254845633|gb|EET24047.1| ATP-dependent RNA helicase [Vibrio cholerae MO10]
gi|255736226|gb|EET91624.1| ATP-dependent RNA helicase [Vibrio cholera CIRS 101]
gi|262023138|gb|EEY41843.1| ATP-dependent RNA helicase [Vibrio cholerae RC27]
gi|262030819|gb|EEY49450.1| ATP-dependent RNA helicase [Vibrio cholerae INDRE 91/1]
gi|340040128|gb|EGR01101.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HCUF01]
gi|340044538|gb|EGR05486.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-49A2]
gi|341627818|gb|EGS53112.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-70A1]
gi|341629427|gb|EGS54585.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-48A1]
gi|341629664|gb|EGS54809.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-40A1]
gi|341639204|gb|EGS63828.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HFU-02]
gi|341643281|gb|EGS67575.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-38A1]
gi|356420719|gb|EHH74234.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-06A1]
gi|356424913|gb|EHH78306.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-21A1]
gi|356426301|gb|EHH79617.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-19A1]
gi|356431259|gb|EHH84464.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-23A1]
gi|356435859|gb|EHH89003.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-28A1]
gi|356437178|gb|EHH90284.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-22A1]
gi|356441078|gb|EHH94008.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-33A2]
gi|356441647|gb|EHH94547.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-32A1]
gi|356446411|gb|EHH99211.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43A1]
gi|356454722|gb|EHI07369.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-61A1]
gi|356457272|gb|EHI09837.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-48B2]
gi|356648821|gb|AET28875.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796771|gb|AFC60241.1| ATP-dependent RNA helicase [Vibrio cholerae IEC224]
gi|395919709|gb|EJH30532.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1032(5)]
gi|395922272|gb|EJH33091.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1041(14)]
gi|395925101|gb|EJH35903.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1038(11)]
gi|395931115|gb|EJH41861.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1046(19)]
gi|395934151|gb|EJH44890.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1042(15)]
gi|395935639|gb|EJH46374.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1048(21)]
gi|395941256|gb|EJH51934.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-20A2]
gi|395947623|gb|EJH58278.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-46A1]
gi|395955372|gb|EJH65972.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-42A1]
gi|395963024|gb|EJH73306.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-56A2]
gi|395966623|gb|EJH76739.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-57A2]
gi|395968524|gb|EJH78473.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1030(3)]
gi|395969452|gb|EJH79329.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1047(20)]
gi|395978896|gb|EJH88261.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-47A1]
gi|408006494|gb|EKG44636.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-41A1]
gi|408012583|gb|EKG50359.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-39A1]
gi|408039780|gb|EKG76045.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1040(13)]
gi|408046931|gb|EKG82590.1| ATP-dependent RNA helicase rhlE [Vibrio Cholerae CP1044(17)]
gi|408048587|gb|EKG83985.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1050(23)]
gi|408059363|gb|EKG94129.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-81A2]
gi|408609061|gb|EKK82444.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1033(6)]
gi|408616560|gb|EKK89710.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-17A1]
gi|408646952|gb|EKL18511.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A2]
gi|408656738|gb|EKL27830.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-62A1]
gi|408661724|gb|EKL32706.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-77A1]
gi|408851202|gb|EKL91140.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-37A1]
gi|408851264|gb|EKL91201.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-17A2]
gi|408873673|gb|EKM12867.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-62B1]
gi|408880132|gb|EKM19062.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-69A1]
gi|439973069|gb|ELP49312.1| ATP-dependent RNA helicase [Vibrio cholerae 4260B]
gi|443432081|gb|ELS74616.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-64A1]
gi|443435910|gb|ELS82038.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-65A1]
gi|443440513|gb|ELS90198.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-67A1]
gi|443441601|gb|ELS94968.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-68A1]
gi|443445628|gb|ELT02347.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-71A1]
gi|443451207|gb|ELT11467.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-72A2]
gi|443459245|gb|ELT26639.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-7A1]
gi|443463450|gb|ELT34454.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-80A1]
gi|443467051|gb|ELT41707.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-81A1]
gi|448262851|gb|EMB00098.1| ATP-dependent RNA helicase [Vibrio cholerae O1 str. Inaba G4222]
Length = 422
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|444375654|ref|ZP_21174907.1| ATP-dependent RNA helicase RhlE [Enterovibrio sp. AK16]
gi|443680157|gb|ELT86804.1| ATP-dependent RNA helicase RhlE [Enterovibrio sp. AK16]
Length = 508
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + L GI++ I+ + +AR A F++G +RVLV TD+AARG
Sbjct: 247 LVFTRTKHGANKLSHFLNDEGITAAPIHGNKSQSARTKALADFKSGDVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP L V+N+ P A+ +VHR+GR RAG G A SLV +DE
Sbjct: 307 IDIPQLPQVVNFEIPHVAEDYVHRIGRTGRAGEPGKAVSLVCADE 351
>gi|167646708|ref|YP_001684371.1| DEAD/DEAH box helicase [Caulobacter sp. K31]
gi|167349138|gb|ABZ71873.1| DEAD/DEAH box helicase domain protein [Caulobacter sp. K31]
Length = 678
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 71/121 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V+ V K L G + I+ DLD + R A F+ G +++LV +DVAARG
Sbjct: 250 IVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGSLKILVASDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP++ V NY+ P A +VHR+GR RAGRSGV Y LV+ + + ++ +G P
Sbjct: 310 LDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADDKGFDKVVKLIGSTP 369
Query: 123 V 123
Sbjct: 370 T 370
>gi|441516681|ref|ZP_20998428.1| putative ATP-dependent RNA helicase, partial [Gordonia hirsuta DSM
44140 = NBRC 16056]
gi|441456474|dbj|GAC56389.1| putative ATP-dependent RNA helicase, partial [Gordonia hirsuta DSM
44140 = NBRC 16056]
Length = 464
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ KF+ G I VLV TDVAAR
Sbjct: 294 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQVAREKALGKFREGNIDVLVATDVAAR 353
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G A + V DEL + +D L LG
Sbjct: 354 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGTAITFVDWDELHRWELIDKALGLG 413
Query: 120 R-KPV 123
+ +PV
Sbjct: 414 KPEPV 418
>gi|229528359|ref|ZP_04417750.1| ATP-dependent RNA helicase [Vibrio cholerae 12129(1)]
gi|229334721|gb|EEO00207.1| ATP-dependent RNA helicase [Vibrio cholerae 12129(1)]
Length = 422
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 77/119 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + + +L G S+ ++ ++ +AR KF+ G +LV TDVAARG
Sbjct: 318 IIFTRTIHETQRIAYVLRALGRSAIPLHGQMNQSARLGALNKFRGGSRDILVATDVAARG 377
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+N++ P +K +VHRVGR ARAG+SGVA S+V+ ++ Y + LG+K
Sbjct: 378 LDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISIVTQYDIEIYQRIEKALGKK 436
>gi|375111010|ref|ZP_09757223.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
jeotgali KCTC 22429]
gi|374568907|gb|EHR40077.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
jeotgali KCTC 22429]
Length = 424
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK+ + + K L G+++ I+ D AR+ +F+ GK+R+LV TD+AARG
Sbjct: 248 LIFVRTKHGADRLAKQLQKDGLTTAAIHGDKAQGARQRALDEFKQGKVRILVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+NY+ P A+ +VHR+GR RAG SGVA +LV DEL D+
Sbjct: 308 LDISELPYVVNYDLPQVAEDYVHRIGRTGRAGLSGVAVTLVGPDELGALQDI 359
>gi|296138846|ref|YP_003646089.1| DEAD/DEAH box helicase [Tsukamurella paurometabola DSM 20162]
gi|296026980|gb|ADG77750.1| DEAD/DEAH box helicase domain protein [Tsukamurella paurometabola
DSM 20162]
Length = 536
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V LG G ++ DL AR+ KF+ G I VLV TDVAAR
Sbjct: 301 TMIFTRTKRTAQKVADELGERGFKVGAVHGDLGQVAREKALGKFRDGSIDVLVATDVAAR 360
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VIN+ P K +VHR+GR RAG++G A +LV DEL + +D L LG
Sbjct: 361 GIDIDDVTHVINFQCPEDDKTYVHRIGRTGRAGKTGTAVTLVDWDELHRWELIDKALGLG 420
Query: 120 R-KPV 123
+ +PV
Sbjct: 421 KPEPV 425
>gi|258620256|ref|ZP_05715295.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
VM573]
gi|258623978|ref|ZP_05718931.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
VM603]
gi|424809155|ref|ZP_18234540.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
SX-4]
gi|258583772|gb|EEW08568.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
VM603]
gi|258587614|gb|EEW12324.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
VM573]
gi|342323580|gb|EGU19364.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio mimicus
SX-4]
Length = 422
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + V + L I++ I+ D T+R+ F++G+ RVLV TD+AARG
Sbjct: 249 LVFTRTKRGADRVARGLNKVNITAQAIHGDKSQTSRQNALNNFKSGETRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VIN+N P + +VHR+GR RAG SG A S DE+ D+ +G+
Sbjct: 309 IDIDELSHVINFNLPNIPETYVHRIGRTGRAGLSGTAISFCEVDEVPLLRDIEKLIGKSI 368
Query: 122 PVLADDS--MKGKIR 134
P + D + M G +R
Sbjct: 369 PEVKDHAYPMSGSLR 383
>gi|153215589|ref|ZP_01950034.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
1587]
gi|124114677|gb|EAY33497.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
1587]
Length = 337
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 170 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 229
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 230 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 274
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + K L A I++ I+ D AR+ F+ G R+LV TD+AARG
Sbjct: 249 LVFTRTKHGADRLVKGLTKATITAQAIHGDKSQNARQAALNNFKQGVTRMLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINYN P + +VHR+GR RAG SG+A S +E+ Y D+ + +K
Sbjct: 309 IDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCEYEEIPYLKDIEKLIKQKI 368
Query: 122 PVLAD 126
PV+ D
Sbjct: 369 PVIGD 373
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T Y + +L G + ++ L +AR KF+ G +LV TDVAARG
Sbjct: 302 IVFTRTVYETQRCAVLLRTLGFGAIPLHGQLSQSARLGALNKFRGGTREILVATDVAARG 361
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP +D ++NY+ P +K ++HRVGR ARAG+SGVA S+V+ ++ + + LG+K
Sbjct: 362 LDIPKVDVILNYDIPSDSKTYIHRVGRTARAGKSGVAISIVTQFDIELFTRIEAALGKK 420
>gi|262275236|ref|ZP_06053046.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
gi|262220481|gb|EEY71796.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
Length = 410
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T+ E + L L G+ + I+ + AR F++G++RVLV TDVAARG
Sbjct: 246 LVFAKTRQSTEALANELKLDGLKAEAIHGEKTQGARNRVLEGFKSGEVRVLVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DIPSLD V NY P + + ++HR+GR RAG+ G+A SLVS +E
Sbjct: 306 LDIPSLDTVFNYELPHQPEDYIHRIGRTGRAGKPGMAISLVSREE 350
>gi|416243311|ref|ZP_11633832.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC7]
gi|326569194|gb|EGE19255.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC7]
Length = 581
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
V+F ATK E + L AG + Y++ DL R + ++GK VLV TDVAA
Sbjct: 260 QAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKSGKCDVLVATDVAA 319
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI ++ VINY+ P + + +VHR+GRC RAGR+GVA +L S D+
Sbjct: 320 RGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSIDD 366
>gi|298293432|ref|YP_003695371.1| DEAD/DEAH box helicase [Starkeya novella DSM 506]
gi|296929943|gb|ADH90752.1| DEAD/DEAH box helicase domain protein [Starkeya novella DSM 506]
Length = 557
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VF+ TK+ + V K L AGI++ I+ + R+ A F+ G ++VLV TD+AAR
Sbjct: 253 ALVFSRTKHGADRVVKSLAGAGINAEAIHGNKSQPQRERALAAFRQGVVKVLVATDIAAR 312
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
GID+P + VINY+ P + +VHR+GR ARAGR G+A S +E + D+
Sbjct: 313 GIDVPGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDGEERPFLRDI 365
>gi|312140644|ref|YP_004007980.1| dead/deah box helicase [Rhodococcus equi 103S]
gi|325675727|ref|ZP_08155411.1| ATP-dependent RNA helicase DeaD [Rhodococcus equi ATCC 33707]
gi|311889983|emb|CBH49301.1| putative DEAD/DEAH box helicase [Rhodococcus equi 103S]
gi|325553698|gb|EGD23376.1| ATP-dependent RNA helicase DeaD [Rhodococcus equi ATCC 33707]
Length = 545
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ A F++GK+ VLV TDVAAR
Sbjct: 296 TMIFTRTKRTAQKVADDLNERGFNVGAVHGDLGQIAREKALAGFRSGKVDVLVATDVAAR 355
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 356 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAITLVDWDDVPRWQLIDKALALG 415
>gi|84387538|ref|ZP_00990556.1| ATP-dependent RNA helicase RhlE [Vibrio splendidus 12B01]
gi|84377586|gb|EAP94451.1| ATP-dependent RNA helicase RhlE [Vibrio splendidus 12B01]
Length = 531
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + L GIS+ I+ + AR F+TGK+RVLV TD+AARG
Sbjct: 247 LVFSKTKHGANKLSHFLDEQGISAAPIHGNKSQGARTKALENFKTGKVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDIP L V+N++ P ++ +VHR+GR RAG G A SLV +DE+
Sbjct: 307 IDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEV 352
>gi|83647393|ref|YP_435828.1| superfamily II DNA/RNA helicase [Hahella chejuensis KCTC 2396]
gi|83635436|gb|ABC31403.1| Superfamily II DNA and RNA helicase [Hahella chejuensis KCTC 2396]
Length = 453
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L GI++ I+ D AR A F+TG +++LV TD+AARG
Sbjct: 247 LVFSRTKHGANRLTRQLCAKGINAAAIHGDKSQNARTKALADFKTGSVQILVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDI L V+N++ P A+ +VHR+GR RAG G A SLVS+DE D+
Sbjct: 307 IDIDQLPQVVNFDLPQVAEDYVHRIGRTGRAGAEGQAVSLVSADEFKLLADI 358
>gi|262173979|ref|ZP_06041656.1| ATP-dependent RNA helicase [Vibrio mimicus MB-451]
gi|261891337|gb|EEY37324.1| ATP-dependent RNA helicase [Vibrio mimicus MB-451]
Length = 422
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKVGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|148975750|ref|ZP_01812581.1| ATP-dependent RNA helicase RhlE [Vibrionales bacterium SWAT-3]
gi|145964823|gb|EDK30075.1| ATP-dependent RNA helicase RhlE [Vibrionales bacterium SWAT-3]
Length = 551
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L GI++ I+ + AR F+TGK+RVLV TD+AARG
Sbjct: 247 LVFSKTKHGANKLARFLDEQGITAAPIHGNKSQGARTKALENFKTGKVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDIP L V+N++ P ++ +VHR+GR RAG G A SLV +DE+
Sbjct: 307 IDIPQLPQVVNFDLPHVSEDYVHRIGRTGRAGEVGKAISLVCADEV 352
>gi|90425187|ref|YP_533557.1| DEAD/DEAH box helicase-like protein [Rhodopseudomonas palustris
BisB18]
gi|90107201|gb|ABD89238.1| DEAD/DEAH box helicase-like [Rhodopseudomonas palustris BisB18]
Length = 481
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 72/112 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V K L AGI++ I+ + R+ A F+ G+IR LV TD+AARG
Sbjct: 255 LIFTRTKHGADKVVKGLARAGITADAIHGNKSQNHRERVLAAFRAGEIRTLVATDIAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG G+A SLV+ +E+ + D+
Sbjct: 315 IDVDGITHVVNFDLPNIPETYVHRIGRTARAGAEGIAISLVAGEEMAFLRDI 366
>gi|91792246|ref|YP_561897.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
gi|91714248|gb|ABE54174.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
Length = 433
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + L L GI S ++ + +R+ +F GK+RVLV T+VAARG
Sbjct: 248 LVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L+ V+NY+ P A+ +VHR+GR RAG++GVA S VS +E D+ +G+K
Sbjct: 308 LDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLIGQK 366
>gi|416156217|ref|ZP_11604349.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 101P30B1]
gi|416216424|ref|ZP_11623748.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 7169]
gi|416220842|ref|ZP_11625651.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 103P14B1]
gi|416228903|ref|ZP_11627835.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 46P47B1]
gi|416237806|ref|ZP_11631161.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC1]
gi|416245780|ref|ZP_11634675.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC8]
gi|416249012|ref|ZP_11636346.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis CO72]
gi|326561884|gb|EGE12219.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 7169]
gi|326563318|gb|EGE13585.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 46P47B1]
gi|326565972|gb|EGE16133.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 103P14B1]
gi|326568894|gb|EGE18963.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC1]
gi|326571867|gb|EGE21872.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BC8]
gi|326575379|gb|EGE25304.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 101P30B1]
gi|326576534|gb|EGE26442.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis CO72]
Length = 581
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
V+F ATK E + L AG + Y++ DL R + ++GK VLV TDVAA
Sbjct: 260 QAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKSGKCDVLVATDVAA 319
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI ++ VINY+ P + + +VHR+GRC RAGR+GVA +L S D+
Sbjct: 320 RGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSIDD 366
>gi|167752757|ref|ZP_02424884.1| hypothetical protein ALIPUT_01018 [Alistipes putredinis DSM 17216]
gi|167659826|gb|EDS03956.1| DEAD/DEAH box helicase [Alistipes putredinis DSM 17216]
Length = 393
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + ++L +GI S I+ + R+ F++GKIRV+V TD+AARG
Sbjct: 267 LVFSRTKHGADNISRLLSKSGIRSEAIHGNKSQNHRQRVLTDFKSGKIRVMVATDIAARG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI L+ VINY+ P + +VHR+GR RAG SG A + + DE D+ G+K
Sbjct: 327 IDIRELEIVINYDLPDVPETYVHRIGRTGRAGHSGTALTFCTPDERPLMKDIQRLTGKK 385
>gi|89890308|ref|ZP_01201818.1| ATP-dependent RNA helicase [Flavobacteria bacterium BBFL7]
gi|89517223|gb|EAS19880.1| ATP-dependent RNA helicase [Flavobacteria bacterium BBFL7]
Length = 425
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF+ TK+ + K L AGI S I+ + AR+ F+ GKI+ LV TD+AAR
Sbjct: 247 TLVFSRTKHGANKIVKDLEKAGIGSAAIHGNKSQAARQRALGAFKEGKIQTLVATDIAAR 306
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDI L V+NY+ P A+ +VHR+GR RAG SG+A S +E + D+ + ++
Sbjct: 307 GIDIDELSYVVNYDLPNVAESYVHRIGRTGRAGASGLAVSFCMLEERPFLKDIEKLIKQQ 366
Query: 122 -PVLAD--------DSMKGKIRHQDGMFGKIPQ 145
PV+ D D+ + ++ Q G G+ PQ
Sbjct: 367 IPVIEDHDFPFKMEDAAEPSLKKQ-GQRGRRPQ 398
>gi|260773840|ref|ZP_05882755.1| ATP-dependent RNA helicase [Vibrio metschnikovii CIP 69.14]
gi|260610801|gb|EEX36005.1| ATP-dependent RNA helicase [Vibrio metschnikovii CIP 69.14]
Length = 420
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + + L L GI + I D AR+ F+ GKIR L+ TDVAARG
Sbjct: 255 LVFTKTKQGSDALAQELKLDGIKAASINGDKSQGARQKALDDFKAGKIRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+N++ P KA+ ++HR+GR RAG+SG+A SL+S E
Sbjct: 315 IDICQLEQVVNFDLPYKAEDYIHRIGRTGRAGQSGLAVSLMSPQE 359
>gi|225849264|ref|YP_002729428.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644065|gb|ACN99115.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 397
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + + + L G S + I+ D R+ F+TGK+++LV TDVAAR
Sbjct: 247 TIIFTQTKLEADQLSEDLSKEGFSVSAIHGDFSQKKRETVLHNFRTGKLKILVATDVAAR 306
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLL 115
G+DI ++ VINY P A+ +VHR+GR RAG+ G A S+ + E Y +L
Sbjct: 307 GLDIKGVELVINYGLPKNAESYVHRIGRTGRAGKEGTAISIPTPSEDKYLQQIL 360
>gi|197337346|ref|YP_002157966.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
gi|197314598|gb|ACH64047.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
Length = 418
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L GI + I D AR +F+TGK+R L+ TDVAARG
Sbjct: 250 LVFTKTKQGSDELVKELKKDGIKAASINGDKSQGARLRALEEFKTGKVRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VINY P KA+ +VHR+GR RAG +G A SL+S DE
Sbjct: 310 LDIEQLECVINYELPFKAEDYVHRIGRTGRAGHTGKAISLMSMDE 354
>gi|16126090|ref|NP_420654.1| DEAD/DEAH box helicase [Caulobacter crescentus CB15]
gi|221234860|ref|YP_002517296.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
gi|13423288|gb|AAK23822.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter
crescentus CB15]
gi|220964032|gb|ACL95388.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
Length = 517
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 73/120 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V+ V K L + G + I+ DLD T R A F++G +++LV +DVAARG
Sbjct: 250 IVFCNRKTEVDIVAKSLKVHGYDAAPIHGDLDQTQRMKTLADFRSGALKILVASDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP++ V NY+ P A +VHR+GR RAGR+G+ Y LV+ + + ++ +G P
Sbjct: 310 LDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRTGITYMLVTPADDKGFDKVIKLIGSTP 369
>gi|416236147|ref|ZP_11630513.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 12P80B1]
gi|326563433|gb|EGE13698.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis 12P80B1]
Length = 581
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
V+F ATK E + L AG + Y++ DL R + ++GK VLV TDVAA
Sbjct: 260 QAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKSGKCDVLVATDVAA 319
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI ++ VINY+ P + + +VHR+GRC RAGR+GVA +L S D+
Sbjct: 320 RGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSIDD 366
>gi|295689524|ref|YP_003593217.1| DEAD/DEAH box helicase [Caulobacter segnis ATCC 21756]
gi|295431427|gb|ADG10599.1| DEAD/DEAH box helicase domain protein [Caulobacter segnis ATCC
21756]
Length = 524
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 73/120 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V+ V K L + G + I+ DLD T R A F++G +++LV +DVAARG
Sbjct: 250 IVFCNRKTEVDIVAKSLKVHGYDAAPIHGDLDQTQRMKTLADFRSGALKILVASDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP++ V NY+ P A +VHR+GR RAGR+G+ Y LV+ + + ++ +G P
Sbjct: 310 LDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRTGITYMLVTPADDKGFDKVVKLIGSTP 369
>gi|91772311|ref|YP_565003.1| DEAD/DEAH box helicase-like protein [Methanococcoides burtonii DSM
6242]
gi|91711326|gb|ABE51253.1| DEAD-box RNA helicase [Methanococcoides burtonii DSM 6242]
Length = 463
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V ++L + I++ I+ T R F++G++RVLV TD+AARG
Sbjct: 248 LVFTRTKHRANKVTEMLNKSNINAGAIHGSKSQTHRTKTLQNFKSGQLRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDI + VINY+ P + +VHR+GR ARAG G AYS ++DE + D+
Sbjct: 308 IDIEDISHVINYDLPNIPESYVHRIGRTARAGAEGTAYSFCAADERDFLRDI 359
>gi|359426039|ref|ZP_09217126.1| putative ATP-dependent RNA helicase [Gordonia amarae NBRC 15530]
gi|358238516|dbj|GAB06708.1| putative ATP-dependent RNA helicase [Gordonia amarae NBRC 15530]
Length = 556
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G ++ DL AR+ KF+ GKI VLV TDVAAR
Sbjct: 301 TMVFTRTKRTAQKVADDLAERGFKVGAVHGDLGQVAREKALKKFREGKIDVLVATDVAAR 360
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL +
Sbjct: 361 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAITLVDWDELHRW 410
>gi|343502075|ref|ZP_08739937.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|418478063|ref|ZP_13047178.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342815654|gb|EGU50567.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|384574338|gb|EIF04810.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 419
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L L GI + I D AR+ F++G++R L+ TDVAARG
Sbjct: 252 LVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGQVRALIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P K++ +VHR+GR RAG+ G A SL+S DE
Sbjct: 312 LDIQQLEQVVNFDMPYKSEDYVHRIGRTGRAGKEGFAVSLMSRDE 356
>gi|223982748|ref|ZP_03632977.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
gi|223965288|gb|EEF69571.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
Length = 424
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L + + I+ + AR+ A F+ +I+VLV TD+AARG
Sbjct: 247 LVFTRTKHEADRVVRFLTKGHVQAMAIHGNKSQNARQKALAAFKNHEIQVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDI L VINYN P ++ +VHR+GR ARAG+ G+A S +DE Y D+
Sbjct: 307 IDIEKLSHVINYNIPNISETYVHRIGRTARAGQEGIAISFCQNDERAYLKDI 358
>gi|85708371|ref|ZP_01039437.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
gi|85689905|gb|EAQ29908.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
Length = 484
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V K L AGI + I+ + R+ +F+ GK +LV TDVAARG
Sbjct: 254 LIFTRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRRGKTMILVATDVAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDIP + V+NY P + +VHR+GR ARAG+ GVA + + DE Y D+
Sbjct: 314 IDIPGVSHVLNYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDI 365
>gi|7020811|dbj|BAA91284.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 77 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 136
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV DE
Sbjct: 137 LDIEGVKTVINFTMPSTIKHYVHRVGRTARAGRAGRSVSLVGEDE 181
>gi|421779191|ref|ZP_16215685.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis RH4]
gi|407813632|gb|EKF84412.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis RH4]
Length = 581
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
V+F ATK E + L AG + Y++ DL R + ++GK VLV TDVAA
Sbjct: 260 QAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKSGKCDVLVATDVAA 319
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI ++ VINY+ P + + +VHR+GRC RAGR+GVA +L S D+
Sbjct: 320 RGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSIDD 366
>gi|164687595|ref|ZP_02211623.1| hypothetical protein CLOBAR_01236 [Clostridium bartlettii DSM
16795]
gi|164603369|gb|EDQ96834.1| DEAD/DEAH box helicase [Clostridium bartlettii DSM 16795]
Length = 541
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
++VVF TK + + L G + ++ DL T R I KF+ G I +LV TDVAA
Sbjct: 245 LSVVFCNTKRGSDELVSELQARGYFADALHGDLKQTQRDIVMDKFRQGTIDILVATDVAA 304
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
RGID+ +D V NY+ P + +VHR+GR RAGR GV++S V E+ D+ +
Sbjct: 305 RGIDVDDVDMVFNYDLPQDEEYYVHRIGRTGRAGREGVSFSFVYGKEMRKMRDIERYTKC 364
Query: 121 K------PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVE 160
K P +AD K F ++ + E +++ +NWVE
Sbjct: 365 KLVKHSIPTIADVEEK----KVAAFFKQVKDTVNESNLAKQINWVE 406
>gi|119477017|ref|ZP_01617298.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
HTCC2143]
gi|119449824|gb|EAW31061.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
HTCC2143]
Length = 431
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 23/159 (14%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI++ I+ + AR A F+ GK++VLV TD+AARG
Sbjct: 247 LVFSRTKHGANKLAKQLDGAGINAAAIHGNKSQGARTKALADFKGGKVQVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG--- 119
+DI L V+N++ P + +VHR+GR RAG +G A SLVS+DE D+ +G
Sbjct: 307 LDIEQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVSADEFKQLSDIERLIGELL 366
Query: 120 --------------------RKPVLADDSMKGKIRHQDG 138
R+P K K+ H+DG
Sbjct: 367 QRQSVDGFKPVNELPESRLNRRPQTPSRPKKAKVGHRDG 405
>gi|62897793|dbj|BAD96836.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 variant [Homo sapiens]
Length = 408
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 79 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 138
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV DE
Sbjct: 139 LDIEGVKTVINFTMPSTIKHYVHRVGRTARAGRAGRSVSLVGEDE 183
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + IL G SS ++ L +AR AKF++G +LV TD+A+RG
Sbjct: 258 IIFTRTVMDCQRLALILKTLGFSSVPLHGQLSQSARLGALAKFKSGGRNILVATDIASRG 317
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+DAVINY+ P +K ++HRVGR ARAGR+G + +LV+ ++ + +G+K
Sbjct: 318 LDIPSVDAVINYDIPSHSKDYIHRVGRTARAGRAGNSITLVTQYDVELIQRIEAVIGKK 376
>gi|393762753|ref|ZP_10351379.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
agri BL06]
gi|392606375|gb|EIW89260.1| DEAD/DEAH box helicase domain-containing protein [Alishewanella
agri BL06]
Length = 424
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK+ + + K L G+++ I+ D AR+ +F+ GK+R+LV TD+AARG
Sbjct: 248 LIFVRTKHGADRLAKQLQKDGLTTAAIHGDKAQGARQRALDEFKQGKVRILVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+NY+ P A+ +VHR+GR RAG SGVA +LV DEL D+
Sbjct: 308 LDISELPYVVNYDLPQVAEDYVHRIGRTGRAGLSGVAVTLVGPDELGALQDI 359
>gi|374367553|ref|ZP_09625614.1| ATP-dependent RNA helicase [Cupriavidus basilensis OR16]
gi|373100856|gb|EHP41916.1| ATP-dependent RNA helicase [Cupriavidus basilensis OR16]
Length = 659
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 70/111 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +R+LV TDVAA
Sbjct: 325 QAIVFTATKRDADSLAERLSDTGFAAGALHGDMTQGARNRTLTSLRRGNLRILVATDVAA 384
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+P + V+N++ P +A+ +VHR+GR RAGRSGVA +LV+ ++ +
Sbjct: 385 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHGDMFQW 435
>gi|27366679|ref|NP_762206.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|37676391|ref|NP_936787.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|320158571|ref|YP_004190949.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
gi|27358245|gb|AAO07196.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|37200933|dbj|BAC96757.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|319933883|gb|ADV88746.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
Length = 418
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + L L GI + I D AR+ F++GK+R L+ TDVAARG
Sbjct: 251 LVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG++G+A S +S DE
Sbjct: 311 LDIAQLEQVVNFDMPYKAEDYVHRIGRTGRAGQTGLAVSFMSRDE 355
>gi|423687688|ref|ZP_17662491.1| ATP-dependent RNA helicase [Vibrio fischeri SR5]
gi|371493471|gb|EHN69074.1| ATP-dependent RNA helicase [Vibrio fischeri SR5]
Length = 418
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L GI + I D AR +F+TGK+R L+ TDVAARG
Sbjct: 250 LVFTKTKQGSDELVKELKKDGIKAASINGDKSQGARLRALEEFKTGKVRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VINY P KA+ +VHR+GR RAG +G A SL+S DE
Sbjct: 310 LDIEQLECVINYELPFKAEDYVHRIGRTGRAGHTGKAISLMSMDE 354
>gi|344199440|ref|YP_004783766.1| DEAD/DEAH box helicase domain-containing protein [Acidithiobacillus
ferrivorans SS3]
gi|343774884|gb|AEM47440.1| DEAD/DEAH box helicase domain protein [Acidithiobacillus
ferrivorans SS3]
Length = 419
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + K L G+ + I+ D AR A+F+ GK+RVLV TD+AARG
Sbjct: 251 LVFTRTKHGADRLAKHLSQDGVQAMAIHGDKSQGARTRALAEFKEGKVRVLVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDI L V+N+ P + +VHR+GR RAG +G A SLVSS+E D+ L R
Sbjct: 311 IDISDLPHVVNFELPHVPEDYVHRIGRTGRAGNNGQAVSLVSSEERKQLQDVEKLLRR 368
>gi|59713557|ref|YP_206332.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
gi|59481805|gb|AAW87444.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
Length = 434
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K L GI + I D AR +F+TGK+R L+ TDVAARG
Sbjct: 266 LVFTKTKQGSDELVKELKKDGIKAASINGDKSQGARLRALEEFKTGKVRALIATDVAARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ VINY P KA+ +VHR+GR RAG +G A SL+S DE
Sbjct: 326 LDIEQLECVINYELPFKAEDYVHRIGRTGRAGHTGKAISLMSMDE 370
>gi|288959329|ref|YP_003449670.1| DEAD-box ATP-dependent RNA helicase [Azospirillum sp. B510]
gi|288911637|dbj|BAI73126.1| DEAD-box ATP-dependent RNA helicase [Azospirillum sp. B510]
Length = 512
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+ + + L AGI++ I+ D +AR F+ G++R LV TD+AAR
Sbjct: 255 TIVFARTKHGADRIADHLKKAGITADAIHGDKSQSARVRALESFRNGELRALVATDIAAR 314
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDI + VIN++ P + + +VHR+GR ARAG G A S +E+ Y D+ + R+
Sbjct: 315 GIDIDGISHVINFDLPNEPESYVHRIGRTARAGTDGSAVSFCDHEEVGYLKDIEKTI-RQ 373
Query: 122 PVLADDS 128
P+ AD S
Sbjct: 374 PIPADAS 380
>gi|152995016|ref|YP_001339851.1| DEAD/DEAH box helicase [Marinomonas sp. MWYL1]
gi|150835940|gb|ABR69916.1| DEAD/DEAH box helicase domain protein [Marinomonas sp. MWYL1]
Length = 463
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 70/106 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI ++ I+ + AR A F+ G+IR+LV TD+AARG
Sbjct: 251 LVFSRTKHGANKITKQLEDAGIRASAIHGNKSQGARTRALADFKEGRIRILVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
+DI L V+N++ P A+ +VHR+GR RAG +G A SLV++DEL
Sbjct: 311 LDIEQLPHVVNFDLPDVAEDYVHRIGRTGRAGATGKAISLVAADEL 356
>gi|83858471|ref|ZP_00951993.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
gi|83853294|gb|EAP91146.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
Length = 480
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 76/121 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ V + L G S+ I+ DLD + R A+F++G++R+LV +DVAARG
Sbjct: 249 IIFCNRKRDVDIVARSLQRHGFSAAPIHGDLDQSQRTKTLAEFKSGELRLLVASDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+DIP++ V N + P A +VHR+GR RAG+ G A +LVSS++ ++ +G++P
Sbjct: 309 LDIPAVSHVFNVDIPRNADDYVHRIGRTGRAGQKGEAVTLVSSEDNKALAKVVKLIGKEP 368
Query: 123 V 123
Sbjct: 369 A 369
>gi|269102593|ref|ZP_06155290.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162491|gb|EEZ40987.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 402
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K LGL GI + I D AR+ F++GK+R LV TDVAARG
Sbjct: 236 LVFTKTKQGSDELVKELGLDGIKAASINGDKSQGARQRALDDFKSGKVRALVATDVAARG 295
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L+ V+N++ P K + +VHR+GR RAG +G A +L+S DE
Sbjct: 296 IDIEQLEYVVNFDMPFKPEDYVHRIGRTGRAGSAGHAITLMSLDE 340
>gi|363419312|ref|ZP_09307413.1| dead/deah box helicase [Rhodococcus pyridinivorans AK37]
gi|359737397|gb|EHK86329.1| dead/deah box helicase [Rhodococcus pyridinivorans AK37]
Length = 564
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G + ++ DL AR+ KF++GKI VLV TDVAAR
Sbjct: 304 TMVFTRTKRTAQKVADDLVERGFACGAVHGDLGQIAREKALDKFRSGKIDVLVATDVAAR 363
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 364 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAITLVDWDDVPRWQLIDKALDLG 423
>gi|332285792|ref|YP_004417703.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330429745|gb|AEC21079.1| putative ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 550
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT+TK + + L G ++ ++ D++ R Q GK+R+LV TDVAARG
Sbjct: 249 IVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLGMLQKGKLRILVATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ + +NY+ P +A+ +VHR+GR RAGRSG+AY+L + E + F+G +P
Sbjct: 309 IDVQGISHAVNYDLPMQAEDYVHRIGRTGRAGRSGLAYTLATHSERHKVRRIEHFIG-QP 367
Query: 123 VLAD 126
+ A+
Sbjct: 368 IPAE 371
>gi|241766307|ref|ZP_04764197.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241363561|gb|EER58995.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 448
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+ + ++ + +AR A F++G+IR LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEFLTKNGVQAMALHGNKSQSARTQALAGFKSGEIRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAG SG A SLV DE + +D+ F
Sbjct: 311 IDIDDLPHVVNYEIPNVSEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMDIERF 365
>gi|404258993|ref|ZP_10962307.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
gi|403402387|dbj|GAC00717.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
Length = 540
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G ++ DL AR+ +F+ G I VLV TDVAAR
Sbjct: 279 TMIFTRTKRTAQKVADDLAERGFKVGAVHGDLGQVAREKALGRFRDGTIDVLVATDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 339 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRWELIDKALGLG 398
>gi|257054731|ref|YP_003132563.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
gi|256584603|gb|ACU95736.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
Length = 559
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ +LV TDVAA
Sbjct: 266 LTMIFTRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRAFRSGKVDILVATDVAA 325
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P K +VHR+GR RAGR+GVA +LV DE+ +
Sbjct: 326 RGIDVEGVTHVINYQMPEDEKTYVHRIGRTGRAGRTGVAITLVDWDEVPRW 376
>gi|21673860|ref|NP_661925.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
gi|21646994|gb|AAM72267.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
Length = 414
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V + L I++ I+ + AR+ F+T + RVLV TD+AARG
Sbjct: 248 LVFTRTKHGADKVARFLAHHDITAEAIHGNKSQNARQRALGNFKTRQTRVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L+ VIN + P + +VHR+GR RAG G AYS +++E Y D+ + RK
Sbjct: 308 IDIDELEYVINIDLPNIPETYVHRIGRTGRAGNRGAAYSFCNAEEKAYLRDIEKLIARKI 367
Query: 122 PVLAD 126
PV+ D
Sbjct: 368 PVIED 372
>gi|375099094|ref|ZP_09745357.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
gi|374659826|gb|EHR59704.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
Length = 552
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 266 LTMIFTRTKRTAQKVADDLAERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 325
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P K +VHR+GR RAG++GVA +LV DE+ +
Sbjct: 326 RGIDVDDVTHVINYQTPEDEKTYVHRIGRTGRAGKTGVAITLVDWDEIPRW 376
>gi|441205997|ref|ZP_20972788.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium smegmatis
MKD8]
gi|440628545|gb|ELQ90341.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium smegmatis
MKD8]
Length = 502
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G ++ DL AR+ F+TG+I VLV TDVAAR
Sbjct: 260 TMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATDVAAR 319
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P + +VHR+GR RAG++GVA +LV DEL + +D L LG
Sbjct: 320 GIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKALNLG 379
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T ++ +L G+ + I + R KF+ + VL+ TDVA+RG
Sbjct: 273 MVFTRTCDATSFLALVLRNLGLRAIPINGHMSQPKRLGALNKFKARECNVLICTDVASRG 332
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSGVA SLV+ EL +YL + +G+K
Sbjct: 333 LDIPSVDMVINYDVPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYLQIENLIGKK 391
>gi|188996905|ref|YP_001931156.1| DEAD/DEAH box helicase domain-containing protein
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931972|gb|ACD66602.1| DEAD/DEAH box helicase domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 405
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + + + L G +++ I+ D R+ F+TGK+++LV TDVAARG
Sbjct: 250 IIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI +D VINY P A+ ++HR+GR RAGR G A S+++ E
Sbjct: 310 LDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSE 354
>gi|421746736|ref|ZP_16184510.1| ATP-dependent RNA helicase [Cupriavidus necator HPC(L)]
gi|409774699|gb|EKN56282.1| ATP-dependent RNA helicase [Cupriavidus necator HPC(L)]
Length = 606
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+VFTATK + + + L G ++ ++ D+ AR + G +RVLV TDVAA
Sbjct: 312 QAIVFTATKRDADSLAERLSDTGFAAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAA 371
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+P + V+N++ P +A+ +VHR+GR RAGRSGVA +LV+ ++ +
Sbjct: 372 RGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHNDAFQW 422
>gi|399986307|ref|YP_006566656.1| ATP-dependent RNA helicase [Mycobacterium smegmatis str. MC2 155]
gi|399230868|gb|AFP38361.1| ATP-dependent RNA helicase [Mycobacterium smegmatis str. MC2 155]
Length = 514
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G ++ DL AR+ F+TG+I VLV TDVAAR
Sbjct: 272 TMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P + +VHR+GR RAG++GVA +LV DEL + +D L LG
Sbjct: 332 GIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKALNLG 391
>gi|118469425|ref|YP_886296.1| DEAD/DEAH box helicase [Mycobacterium smegmatis str. MC2 155]
gi|118170712|gb|ABK71608.1| DEAD/DEAH box helicase [Mycobacterium smegmatis str. MC2 155]
Length = 502
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G ++ DL AR+ F+TG+I VLV TDVAAR
Sbjct: 260 TMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATDVAAR 319
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P + +VHR+GR RAG++GVA +LV DEL + +D L LG
Sbjct: 320 GIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKALNLG 379
>gi|282860072|ref|ZP_06269153.1| ATP-dependent RNA helicase DeaD family protein [Prevotella bivia
JCVIHMP010]
gi|424899483|ref|ZP_18323025.1| DNA/RNA helicase, superfamily II [Prevotella bivia DSM 20514]
gi|282587160|gb|EFB92384.1| ATP-dependent RNA helicase DeaD family protein [Prevotella bivia
JCVIHMP010]
gi|388591683|gb|EIM31922.1| DNA/RNA helicase, superfamily II [Prevotella bivia DSM 20514]
Length = 589
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIASSLNRKHINCGEMHSDLDQAQRDDVMFKFKSGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
IDI + VINY+ P + +VHR+GR ARA R GVA + V+ D++ Y+ + FL
Sbjct: 309 IDIDDITMVINYDVPHDVEDYVHRIGRTARADRDGVAITFVNGDDIYYFQQIESFL 364
>gi|387792078|ref|YP_006257143.1| DNA/RNA helicase [Solitalea canadensis DSM 3403]
gi|379654911|gb|AFD07967.1| DNA/RNA helicase, superfamily II [Solitalea canadensis DSM 3403]
Length = 440
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + + L I + I+ D AR+ + F++ IR+LV TD+AARG
Sbjct: 249 LVFTKTKHGADRIARDLNKHKIKAEAIHGDKSQNARQRALSNFKSKDIRILVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VIN++ P +A+ +VHR+GR RAG SG A + +E+ Y D++ +G+
Sbjct: 309 IDIDDLLHVINFDIPYEAETYVHRIGRTGRAGASGTALTFCDPEEMTYLKDIVKLIGKSI 368
Query: 122 PVLAD 126
P + D
Sbjct: 369 PTVED 373
>gi|351729711|ref|ZP_08947402.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 617
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+++ ++ + +AR A F++G IR LV TD+AARG
Sbjct: 257 LVFTRTKFGANNVAEFLTKNGVNAMALHGNKSQSARTQALAGFKSGDIRALVATDIAARG 316
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAG SG A SLV DE + +D+ F
Sbjct: 317 IDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCMDEEGFMMDIERF 371
>gi|325104041|ref|YP_004273695.1| DEAD/DEAH box helicase [Pedobacter saltans DSM 12145]
gi|324972889|gb|ADY51873.1| DEAD/DEAH box helicase domain protein [Pedobacter saltans DSM
12145]
Length = 451
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 71/126 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L I S I+ + AR+ F+T IRVLV TD+AARG
Sbjct: 250 LVFTRTKHGADRVVKTLAKQHIKSAAIHGNKSQNARQRALDDFKTKAIRVLVATDIAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI SL VINY P + +VHR+GR RAG G+A S DE + D+ +G+
Sbjct: 310 IDIDSLKYVINYEIPNIPETYVHRIGRSGRAGAEGIAISFCDVDEKPFLKDIEKIIGKSV 369
Query: 123 VLADDS 128
L +D+
Sbjct: 370 PLGEDN 375
>gi|395763064|ref|ZP_10443733.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 468
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG S+ ++ D+ AR + G+++VLV TDVAARG
Sbjct: 271 VVFTATKRDADTIADRLNIAGFSAAALHGDMHQGARNRTLDGMRRGQVKVLVATDVAARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P + +VHR+GR RAGR+G+A SLV+ E
Sbjct: 331 IDVPTITHVFNYDLPKFPEDYVHRIGRTGRAGRNGLAISLVNHAE 375
>gi|118618015|ref|YP_906347.1| ATP-dependent RNA helicase RhlE [Mycobacterium ulcerans Agy99]
gi|118570125|gb|ABL04876.1| ATP-dependent RNA helicase RhlE [Mycobacterium ulcerans Agy99]
Length = 517
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+ G + VLV TDVAAR
Sbjct: 272 TMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALKSFRRGSVNVLVATDVAAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 332 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWTMIDKALGLG 391
>gi|319790474|ref|YP_004152107.1| DEAD/DEAH box helicase domain protein [Thermovibrio ammonificans
HB-1]
gi|317114976|gb|ADU97466.1| DEAD/DEAH box helicase domain protein [Thermovibrio ammonificans
HB-1]
Length = 417
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 64/106 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK + K L GI++ I+ DL R+ F+ GK++VLV TDVAAR
Sbjct: 243 TIVFVKTKRDAADIEKELQRRGINARAIHGDLSQRQREFVMRAFREGKVKVLVATDVAAR 302
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GIDI + VINY P + +VHR+GR RAGR G+A SLV+ E
Sbjct: 303 GIDIKDVGLVINYELPENPESYVHRIGRTGRAGREGLAISLVAEPE 348
>gi|114046344|ref|YP_736894.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113887786|gb|ABI41837.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 549
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L A IS+ I+ + AR A F++G++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG SG A SLVSS+E D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDIERLINR 364
>gi|361128972|gb|EHL00897.1| putative ATP-dependent rRNA helicase rrp3 [Glarea lozoyensis 74030]
Length = 203
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T + + +L G + ++ L +AR KF+ G +LV TDVAARG
Sbjct: 21 IVFTRTVNETQRLAILLRTLGFGAIPLHGQLSQSARLGALNKFRAGSREILVATDVAARG 80
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAG+SG A SLV+ ++ +L + LG K
Sbjct: 81 LDIPSVDVVLNYDLPPDSKTYIHRVGRTARAGKSGHAISLVTQYDVEIWLRIEAALGEK 139
>gi|357022809|ref|ZP_09085031.1| DEAD/DEAH box helicase domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
gi|356477430|gb|EHI10576.1| DEAD/DEAH box helicase domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
Length = 481
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+ G+I VLV TDVAAR
Sbjct: 242 TMIFTRTKRTAQKVADELAERGFAVGAVHGDLGQVAREKALKAFRAGEIDVLVATDVAAR 301
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P + +VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 302 GIDIEDVTHVINYQIPEDEQAYVHRIGRTGRAGRTGVAITLVDWDELPRWEMIDKALNLG 361
>gi|126664124|ref|ZP_01735117.1| possible ATP-dependent RNA helicase [Flavobacteria bacterium BAL38]
gi|126623838|gb|EAZ94533.1| possible ATP-dependent RNA helicase [Flavobacteria bacterium BAL38]
Length = 419
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + K+L A I + I+ D AR+ +F+ +I +LV TD+AARG
Sbjct: 249 LVFTRTKHGADNIVKVLKKAHIKAEAIHGDKSQNARQRVLEQFKNKEIDILVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDI L VIN++ P ++ +VHR+GR RAG SG+A S DE Y+LD+
Sbjct: 309 IDIEQLPFVINFDIPNISETYVHRIGRTGRAGNSGLAISFCGKDEKPYWLDI 360
>gi|390941064|ref|YP_006404801.1| DNA/RNA helicase [Sulfurospirillum barnesii SES-3]
gi|390194171|gb|AFL69226.1| DNA/RNA helicase, superfamily II [Sulfurospirillum barnesii SES-3]
Length = 417
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 66/108 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+H V + L GISS+ I+ + AR A F+ G I+VLV TD+AARG
Sbjct: 248 LVFTRTKHHANKVSEYLNKIGISSSAIHGNKSQGARTKALADFKGGSIKVLVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCY 110
+DI L V+N P A+ +VHR+GR RAG +G A SLV DE Y
Sbjct: 308 LDIDQLPHVVNLELPNIAEDYVHRIGRTGRAGNNGEAISLVCVDEFEY 355
>gi|383825179|ref|ZP_09980330.1| putative ATP-dependent RNA helicase [Mycobacterium xenopi
RIVM700367]
gi|383335581|gb|EID14011.1| putative ATP-dependent RNA helicase [Mycobacterium xenopi
RIVM700367]
Length = 455
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G I VLV TDVAAR
Sbjct: 238 TMIFTRTKRTAQKVADELAGRGFAVGAVHGDLGQVAREKALKAFRSGAIDVLVATDVAAR 297
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+GVA +LV DEL + +D L LG
Sbjct: 298 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGVAVTLVDWDELARWAMIDKALGLG 357
>gi|327313656|ref|YP_004329093.1| putative cold-shock DEAD-box protein A [Prevotella denticola F0289]
gi|326944744|gb|AEA20629.1| putative cold-shock DEAD-box protein A [Prevotella denticola F0289]
Length = 572
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + LG I+ ++SDLD R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIAASLGRKHINCGEMHSDLDQEQRNDVMFKFKSGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R G A + V+ D++ Y+ + FL ++
Sbjct: 309 IDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGKAITFVNVDDIYYFKQIESFLDKE 367
>gi|86142428|ref|ZP_01060938.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85831180|gb|EAQ49637.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 442
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K+L AGI + I+ + AR+ F+ GK+ VLV TD+AARG
Sbjct: 249 LVFSRTKHGANKIVKVLDKAGIQAAAIHGNKSQAARQKALNAFKEGKLHVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L+ VI Y+ P + +VHR+GR RA SG+A S ++DE Y D+ + +K
Sbjct: 309 IDVSELELVIQYDLPNVPETYVHRIGRTGRAKASGIAISFCATDERAYLKDIEKLIKQKI 368
Query: 122 ------PVLADDS 128
P L+D++
Sbjct: 369 HVIEEHPFLSDEA 381
>gi|229526712|ref|ZP_04416116.1| ATP-dependent RNA helicase [Vibrio cholerae bv. albensis VL426]
gi|229336870|gb|EEO01888.1| ATP-dependent RNA helicase [Vibrio cholerae bv. albensis VL426]
Length = 422
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSYDE 359
>gi|84515959|ref|ZP_01003320.1| DEAD/DEAH box helicase [Loktanella vestfoldensis SKA53]
gi|84510401|gb|EAQ06857.1| DEAD/DEAH box helicase [Loktanella vestfoldensis SKA53]
Length = 447
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK+ E ++K L G ++ I+ + R+ F+ GK+RVLV TDVAA
Sbjct: 247 LALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAA 306
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
RGIDIP + V NY+ P A+ +VHR+GR ARAG G A +LV+ DE+ D+
Sbjct: 307 RGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGADGSAIALVAPDEMIELQDI 360
>gi|427429668|ref|ZP_18919655.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
gi|425879905|gb|EKV28606.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
Length = 469
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + + L G+ + I+ + AR+ F+ GK++ LV TD+AARG
Sbjct: 249 LVFTRTKHGADKLVRQLEQDGVGAAAIHGNKSQNARQAALKDFRKGKVKALVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
IDI L V+N+ P + + +VHR+GR ARAG SG+A SL +DEL Y D+
Sbjct: 309 IDIDGLTHVVNFELPNEPESYVHRIGRTARAGASGMAISLCDTDELFYLRDI 360
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 75/118 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT T ++ +L G+ + I + + R KF+ G+ +L+ TDVA+R
Sbjct: 256 TMVFTRTCDATHFLALVLRNLGLRAIPINGHMSQSKRLGALNKFKAGECNILICTDVASR 315
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
G+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG+A SLV+ +E+ ++ + +G
Sbjct: 316 GLDIPSVDMVVNYDIPTNSKDYIHRVGRTARAGRSGLAISLVNQNEIGWFKQIENLIG 373
>gi|149917594|ref|ZP_01906091.1| putative ATP-dependent RNA helicase RhlE [Plesiocystis pacifica
SIR-1]
gi|149821657|gb|EDM81055.1| putative ATP-dependent RNA helicase RhlE [Plesiocystis pacifica
SIR-1]
Length = 437
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 71/117 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VF+ TK+ + K L AG+SS I+ + AR F+ G++RVLV TD+AAR
Sbjct: 245 SLVFSRTKHGANRIAKHLSAAGVSSAAIHGNKSQNARTRALEAFKGGELRVLVATDIAAR 304
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
G+DI + VIN++ P + ++HR+GR ARAG SG+A S +E Y +D+ L
Sbjct: 305 GLDISKVSHVINFDLPNVPETYIHRIGRTARAGNSGIALSFCDVEERAYLVDIERLL 361
>gi|394988591|ref|ZP_10381426.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
gi|393791970|dbj|GAB71065.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
Length = 476
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + L GIS+T I+ D R A+F+ G +RVLV TDVAARG
Sbjct: 251 LVFSRTKHGASRLAQQLEKDGISATAIHGDKSQQQRTQALAEFKDGTVRVLVATDVAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI L V+N++ P + +VHR+GR RAG SG A SLV +DEL ++ L R+
Sbjct: 311 LDIDQLPHVVNFDLPNAPEDYVHRIGRTGRAGSSGEAISLVCADELRMLAEIESMLKRE 369
>gi|333986675|ref|YP_004519282.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
sp. SWAN-1]
gi|333824819|gb|AEG17481.1| DEAD/DEAH box helicase domain protein [Methanobacterium sp. SWAN-1]
Length = 530
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++VF TK V+ + L + G ++ ++ D+ + R AKF+ GKI VLV TDVAA
Sbjct: 245 LSLVFCNTKRRVDKLVTHLQIRGYAADGLHGDMTQSQRDRVMAKFRNGKIEVLVATDVAA 304
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
RGID+ +++AV NY+ P + +VHR+GR RAG++G+A++ VS E+ D+
Sbjct: 305 RGIDVENVEAVFNYDVPNDDEYYVHRIGRTGRAGKTGMAFTFVSGKEIYQLRDI 358
>gi|325860554|ref|ZP_08173658.1| putative cold-shock DEAD-box protein A [Prevotella denticola CRIS
18C-A]
gi|325481939|gb|EGC84968.1| putative cold-shock DEAD-box protein A [Prevotella denticola CRIS
18C-A]
Length = 572
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + LG I+ ++SDLD R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIAASLGRKHINCGEMHSDLDQEQRNDVMFKFKSGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R G A + V+ D++ Y+ + FL ++
Sbjct: 309 IDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGKAITFVNVDDIYYFKQIESFLDKE 367
>gi|334366430|ref|ZP_08515362.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
gi|313157396|gb|EFR56819.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
Length = 473
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + +IL AGI I+ D AR+ F+ G+ RVL+ TD+AARG
Sbjct: 248 LVFSRTKHGADRIARILTKAGIEGRAIHGDKSQGARERAMNDFRAGRCRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L VINY+ P A+ +VHR+GR RAG G A + S DE D+ G
Sbjct: 308 IDISELPLVINYDLPEVAETYVHRIGRTGRAGHDGTAIAFCSEDERPLLKDIQKLTG 364
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T H + V + + G S+ ++ L R KF++G ++LV TDVAARG
Sbjct: 310 IVFARTCAHAQKVALLARILGFSAIPLHGQLTQAQRLGALNKFKSGDKQILVATDVAARG 369
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLL 116
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLV+ Y L+L+L
Sbjct: 370 LDIPSVDLVVNYDIPTDSKAYIHRVGRTARAGRSGKSVSLVTQ----YDLELIL 419
>gi|291614701|ref|YP_003524858.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291584813|gb|ADE12471.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 450
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + K L G+S+ I+ D R F+ G++ VL+ TDVAARG
Sbjct: 254 IVFTKTKLTASRLAKQLQREGVSADAIHGDKSQLERMQALDAFKQGRVAVLIATDVAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI SL VINY P A+ +VHR+GR RAG SG A SLVS +E Y L++
Sbjct: 314 LDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGASGTAISLVSPEEEKYLLEI 365
>gi|150007803|ref|YP_001302546.1| ATP-dependent RNA helicase DeaD [Parabacteroides distasonis ATCC
8503]
gi|256840069|ref|ZP_05545578.1| ATP-dependent RNA helicase DeaD [Parabacteroides sp. D13]
gi|298376828|ref|ZP_06986783.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_19]
gi|423331702|ref|ZP_17309486.1| hypothetical protein HMPREF1075_01499 [Parabacteroides distasonis
CL03T12C09]
gi|149936227|gb|ABR42924.1| ATP-dependent RNA helicase DeaD [Parabacteroides distasonis ATCC
8503]
gi|256738999|gb|EEU52324.1| ATP-dependent RNA helicase DeaD [Parabacteroides sp. D13]
gi|298266706|gb|EFI08364.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_19]
gi|409229543|gb|EKN22415.1| hypothetical protein HMPREF1075_01499 [Parabacteroides distasonis
CL03T12C09]
Length = 421
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V ++L A I + I+ + TAR+ F+ RVL+ TD+AARG
Sbjct: 248 LIFTRTKHGADKVARVLSKAEIGAEAIHGNKSQTARQRALTNFKDHTTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY P + +VHR+GR RAGR GVA+S ++E+ D+ +G++
Sbjct: 308 IDVDHLTHVINYELPNVPETYVHRIGRTGRAGREGVAFSFCDAEEVPLLKDIQKLIGKEV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PIAGGHM 374
>gi|409200280|ref|ZP_11228483.1| ATP-dependent RNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 411
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + K L G+ + I+ D AR ++F++G+IRVLV TDVAARG
Sbjct: 247 LVFTRTKNSADSYAKELNKDGLKTAAIHGDKSQGARDKALSQFKSGEIRVLVATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI SL+ V N P A+ +VHR+GR RAG++G A SLVS DE ++ +FL +
Sbjct: 307 IDIDSLNYVCNAELPYVAEDYVHRIGRSGRAGQNGQAISLVSIDEQWLLEEIEIFLDER 365
>gi|402820563|ref|ZP_10870130.1| hypothetical protein IMCC14465_13640 [alpha proteobacterium
IMCC14465]
gi|402511306|gb|EJW21568.1| hypothetical protein IMCC14465_13640 [alpha proteobacterium
IMCC14465]
Length = 480
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 71/113 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK+ + + K L G++++ I+ + AR+ F+ G+ +L+ TD+AAR
Sbjct: 246 TIIFTRTKHGADQLVKYLSKQGVTASAIHGNKSQNARQRTLDAFRKGEEHILIATDIAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
GIDIP + V+NY+ P + +VHR+GR ARAGR G A +L + +E + D+
Sbjct: 306 GIDIPDVSLVVNYDVPTTPEAYVHRIGRTARAGREGRAITLCAPEEQKHLRDI 358
>gi|317503390|ref|ZP_07961434.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella salivae
DSM 15606]
gi|315665485|gb|EFV05108.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella salivae
DSM 15606]
Length = 542
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K V+ V L I+ ++SDLD R KF++G+ VLV TD+ ARG
Sbjct: 249 IIFCGSKMKVKQVAGALQRKHINCGEMHSDLDQAMRDEVMFKFKSGQFDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
IDI + VINY+ P A+ +VHR+GR ARA R G A + VS D++ Y+ + FLG++
Sbjct: 309 IDIDDISMVINYDVPHDAEDYVHRIGRTARAAREGSAITFVSDDDIYYFQLIEKFLGKQ 367
>gi|390945687|ref|YP_006409447.1| DNA/RNA helicase [Alistipes finegoldii DSM 17242]
gi|390422256|gb|AFL76762.1| DNA/RNA helicase, superfamily II [Alistipes finegoldii DSM 17242]
Length = 473
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + +IL AGI I+ D AR+ F+ G+ RVL+ TD+AARG
Sbjct: 248 LVFSRTKHGADRIARILTKAGIEGRAIHGDKSQGARERAMNDFRAGRCRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI L VINY+ P A+ +VHR+GR RAG G A + S DE D+ G
Sbjct: 308 IDISELPLVINYDLPEVAETYVHRIGRTGRAGHDGTAIAFCSEDERPLLKDIQKLTG 364
>gi|389576917|ref|ZP_10166945.1| DNA/RNA helicase, superfamily II [Eubacterium cellulosolvens 6]
gi|389312402|gb|EIM57335.1| DNA/RNA helicase, superfamily II [Eubacterium cellulosolvens 6]
Length = 524
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK+ + V + L +GI++ I+ D R+ ++ G VLV TDVA+R
Sbjct: 243 TIIFTRTKHGADRVARNLTRSGIAAKAIHGDKTQGQRQSTLEGYKAGHFHVLVATDVASR 302
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLL 115
G+DIP + VIN+N P + + ++HR+GR RAG SG+A +L DE +DLL
Sbjct: 303 GLDIPEVSHVINFNLPQEPEAYIHRIGRTGRAGESGIAITLCEEDE----MDLL 352
>gi|71280656|ref|YP_266818.1| DEAD-box ATP dependent DNA helicase [Colwellia psychrerythraea 34H]
gi|71146396|gb|AAZ26869.1| ATP-dependent RNA helicase, DEAD box family [Colwellia
psychrerythraea 34H]
Length = 420
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K + G+ S I+ D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 250 LVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L VINY P A+ +VHR+GR ARAG SG+A SLVS E
Sbjct: 310 IDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGE 354
>gi|445496067|ref|ZP_21463111.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444792228|gb|ELX13775.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 477
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG S+ ++ D+ AR + G++++L+ TDVAARG
Sbjct: 281 VVFTATKRDADTIADRLNIAGFSAAALHGDMHQGARNRTLDSLRRGQVKILIATDVAARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V NY+ P + +VHR+GR RAGR+G+A SLV+ E
Sbjct: 341 IDVPTITHVFNYDLPKFPEDYVHRIGRTGRAGRNGLAISLVNHAE 385
>gi|357042215|ref|ZP_09103921.1| hypothetical protein HMPREF9138_00393 [Prevotella histicola F0411]
gi|355369674|gb|EHG17065.1| hypothetical protein HMPREF9138_00393 [Prevotella histicola F0411]
Length = 572
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ +RG
Sbjct: 249 IIFSGSKQKVKQITASLNRKHINCGEMHSDLDQAHRDDVMFKFKSGQIDVLVATDIVSRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR-- 120
IDI + VINY+ P A+ +VHR+GR ARA R G A + VS+D++ Y+ + FL +
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARADRDGKAITFVSADDIYYFKQIESFLEKDV 368
Query: 121 -KPVLADD 127
K L DD
Sbjct: 369 EKVALPDD 376
>gi|343927604|ref|ZP_08767072.1| putative ATP-dependent RNA helicase [Gordonia alkanivorans NBRC
16433]
gi|343762245|dbj|GAA13998.1| putative ATP-dependent RNA helicase [Gordonia alkanivorans NBRC
16433]
Length = 550
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G ++ DL AR+ +F+ G I VLV TDVAAR
Sbjct: 291 TMIFTRTKRTAQKVADDLAERGFKVGAVHGDLGQIAREKALGRFRNGTIDVLVATDVAAR 350
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 351 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRWELIDKALGLG 410
>gi|282878371|ref|ZP_06287163.1| putative ATP-dependent RNA helicase DeaD [Prevotella buccalis ATCC
35310]
gi|281299557|gb|EFA91934.1| putative ATP-dependent RNA helicase DeaD [Prevotella buccalis ATCC
35310]
Length = 558
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ V + L I+ ++SDLD R +F++G+I VLV TD+ +RG
Sbjct: 249 IIFCGAKQKVKQVSQALQRMKINCGEMHSDLDQAQRDEVMFQFKSGQIDVLVATDILSRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
IDI + VINY+ P A+ +VHR+GR ARA R G A +LVS D++ Y+ + FL
Sbjct: 309 IDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGAAITLVSKDDIYYFQQIEKFL 364
>gi|325269118|ref|ZP_08135738.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
multiformis DSM 16608]
gi|324988505|gb|EGC20468.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
multiformis DSM 16608]
Length = 572
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ +K V+ + L I+ ++SDLD R KF++G+I VLV TD+ ARG
Sbjct: 249 IIFSGSKQKVKQIAASLSRKHINCGEMHSDLDQEQRNDVMFKFKSGQIDVLVATDIVARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
IDI + VINY+ P A+ +VHR+GR ARA R G A + VS D++ Y+ + FL
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARADRDGKAITFVSVDDIYYFQQIEAFL 364
>gi|291302062|ref|YP_003513340.1| DEAD/DEAH box helicase [Stackebrandtia nassauensis DSM 44728]
gi|290571282|gb|ADD44247.1| DEAD/DEAH box helicase domain protein [Stackebrandtia nassauensis
DSM 44728]
Length = 557
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF+ TK H + V L G + ++ DL AR+ F++GKI VLV TDVAA
Sbjct: 274 LTIVFSRTKRHTQRVADDLEFRGFAVAAVHGDLGQNARERALRAFRSGKIDVLVATDVAA 333
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE------LCYYLDL 114
RG+D+ + VINY+ P A+ +VHR+GR RAG +GVA + VS ++ + LDL
Sbjct: 334 RGLDVRDVTHVINYDSPEDAETYVHRIGRTGRAGATGVAVTFVSWEDAPRWKIIAKTLDL 393
Query: 115 LLFLGRKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNN 174
L + D + + +G G + DQ E ++ E D D+EG ++
Sbjct: 394 ELSDPVETYHTSDHLYTDLDIPEGAPGSL---ATADQTREGLS-AEADIDIEGGKR---- 445
Query: 175 AYKKYVKSRPGA 186
K + R GA
Sbjct: 446 --GKSARGRSGA 455
>gi|377820473|ref|YP_004976844.1| DEAD/DEAH box helicase [Burkholderia sp. YI23]
gi|357935308|gb|AET88867.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
YI23]
Length = 546
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 305 IVFTATKSDADLIANRLADAGFESAALHGDLPQGARNRTIRALREKRVRVLVATDVAARG 364
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDIP + V NY+ P A+ +VHR+GR RAGRSG A SLV E+
Sbjct: 365 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHYAEM 410
>gi|383828834|ref|ZP_09983923.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
gi|383461487|gb|EID53577.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
Length = 545
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 256 LTMIFTRTKRTAQKVADDLTERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 315
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + V+NY P K +VHR+GR RAG++GVA +LV DEL +
Sbjct: 316 RGIDVDDVTHVVNYQTPEDEKTYVHRIGRTGRAGKTGVAITLVDWDELPRW 366
>gi|332297922|ref|YP_004439844.1| DEAD/DEAH box helicase domain protein [Treponema brennaborense DSM
12168]
gi|332181025|gb|AEE16713.1| DEAD/DEAH box helicase domain protein [Treponema brennaborense DSM
12168]
Length = 610
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINA-AKFQTGKIRVLVVTDVAAR 61
+VF TK E V K L L GI S +I DL P A+++ F+ G ++ LV TDVAAR
Sbjct: 247 IVFCNTKRSCEVVAKRLQLNGIESEFIIGDL-PQAKRLQVLESFKRGSLKCLVATDVAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
GID+ L V+NY+ P +++ +VHR+GR ARAG+SG AY+ S ++ + +LG
Sbjct: 306 GIDVNDLAMVVNYDLPNESENYVHRIGRTARAGKSGKAYTFCSEQDVYNLPAIERYLG 363
>gi|209518020|ref|ZP_03266851.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209501524|gb|EEA01549.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 532
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 304 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 363
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSGVA SLV E
Sbjct: 364 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGVAVSLVHHAE 408
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L G+ + ++ L +AR KF+ G +LV TDVAARG
Sbjct: 334 IIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGSREILVATDVAARG 393
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP++D VIN++ P +K +VHRVGR ARAG+SG A S+V+ +L +L + LG K
Sbjct: 394 LDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDLEIWLRIEAALGHKL 453
Query: 122 ---PVLADDSMKGKIRHQDG 138
P+ D+ M K R ++
Sbjct: 454 DEYPLEKDEVMVFKPRVEEA 473
>gi|389722095|ref|ZP_10188778.1| ATP-dependent RNA helicase [Rhodanobacter sp. 115]
gi|388443987|gb|EIM00117.1| ATP-dependent RNA helicase [Rhodanobacter sp. 115]
Length = 437
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 73/117 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF+ TK+ + + K L ++G+ + I+ + AR + F++G++ VLV TD+AAR
Sbjct: 246 TLVFSRTKHGADKLVKFLEVSGLRAAAIHGNKSQNARTRALSDFKSGRVTVLVATDIAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
GIDI L VIN++ P A+ +VHR+GR RAG G+A SLVS DE D+ L
Sbjct: 306 GIDIDQLPVVINHDLPMVAEDYVHRIGRTGRAGSEGLALSLVSHDESGLLRDIRKLL 362
>gi|388568067|ref|ZP_10154491.1| DEAD/DEAH box helicase domain-containing protein [Hydrogenophaga
sp. PBC]
gi|388264699|gb|EIK90265.1| DEAD/DEAH box helicase domain-containing protein [Hydrogenophaga
sp. PBC]
Length = 588
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V L GI++ ++ + AR A F++G+IR LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVADYLNKNGITAMALHGNKSQGARTQALAGFKSGEIRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY+ P + +VHR+GR RAGR G A +LVS DE + +++ F
Sbjct: 311 IDIDELPHVVNYDIPNICEDYVHRIGRTGRAGREGQAVNLVSLDEEGFMMEIERF 365
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L G+ + ++ L +AR KF+ G +LV TDVAARG
Sbjct: 334 IIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGSREILVATDVAARG 393
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIP++D VIN++ P +K +VHRVGR ARAG+SG A S+V+ +L +L + LG K
Sbjct: 394 LDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDLEIWLRIEAALGHKL 453
Query: 122 ---PVLADDSMKGKIRHQDG 138
P+ D+ M K R ++
Sbjct: 454 DEYPLEKDEVMVFKPRVEEA 473
>gi|253575100|ref|ZP_04852439.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845556|gb|EES73565.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
Length = 410
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + + L A +S+ I+ D AR+ F+ +RVLV TD+AARG
Sbjct: 249 IVFTRTKHGADRLVRHLTKAQVSAKAIHGDKSQGARQTALQDFKNRTLRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
IDI L VINY P + +VHR+GR RAG+SGVA S DE Y D+ +G++
Sbjct: 309 IDIDELSHVINYELPNIPETYVHRIGRTGRAGQSGVAISFCDFDEKPYLADIEKLIGKRI 368
Query: 122 PVLAD 126
PV+ +
Sbjct: 369 PVIKE 373
>gi|85713494|ref|ZP_01044484.1| DEAD/DEAH box helicase [Nitrobacter sp. Nb-311A]
gi|85699398|gb|EAQ37265.1| DEAD/DEAH box helicase [Nitrobacter sp. Nb-311A]
Length = 479
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V K L +GI S I+ + R+ A F+TG+IR LV TD+AARG
Sbjct: 255 LIFTRTKHGADKVVKSLAKSGIRSNAIHGNKSQNHRERVLAAFRTGEIRTLVATDIAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG G A SLV+ ++E+ Y D+
Sbjct: 315 IDVDGISHVVNFDLPNVPETYVHRIGRTARAGTEGAAISLVAGAEEMAYLRDI 367
>gi|401826760|ref|XP_003887473.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|395459991|gb|AFM98492.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 465
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATKY VE + +IL S IYS +D AR+ N F T +LVVTDVAAR
Sbjct: 204 TIVFVATKYAVELLLEILNKNNFESCGIYSSMDDEARRANFRDFNTSSAGILVVTDVAAR 263
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
G+DIP LD V+NY+ C + F+HRVGR GV YS V+ ++ ++ ++
Sbjct: 264 GLDIPCLDTVVNYDL-CDERTFLHRVGRVRGM---GVQYSFVTYTDVFHFFNI 312
>gi|419709175|ref|ZP_14236643.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus M93]
gi|382943056|gb|EIC67370.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus M93]
Length = 490
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALTSFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|255013488|ref|ZP_05285614.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_7]
gi|410103658|ref|ZP_11298579.1| hypothetical protein HMPREF0999_02351 [Parabacteroides sp. D25]
gi|409236387|gb|EKN29194.1| hypothetical protein HMPREF0999_02351 [Parabacteroides sp. D25]
Length = 421
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V ++L A I + I+ + TAR+ F+ RVL+ TD+AARG
Sbjct: 248 LIFTRTKHGADKVARVLSKAEIGAEAIHGNKSQTARQRALTNFKDHTTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY P + +VHR+GR RAGR GVA+S ++E+ D+ +G++
Sbjct: 308 IDVDHLTHVINYELPNVPETYVHRIGRTGRAGREGVAFSFCDAEEVPLLKDIQKLIGKEV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PIAGGHM 374
>gi|169630612|ref|YP_001704261.1| ATP-dependent DEAD-box RNA helicase [Mycobacterium abscessus ATCC
19977]
gi|420865045|ref|ZP_15328434.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0303]
gi|420869835|ref|ZP_15333217.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0726-RA]
gi|420874280|ref|ZP_15337656.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0726-RB]
gi|420911162|ref|ZP_15374474.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0125-R]
gi|420917618|ref|ZP_15380921.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0125-S]
gi|420922781|ref|ZP_15386077.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0728-S]
gi|420928443|ref|ZP_15391723.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-1108]
gi|420968051|ref|ZP_15431255.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0810-R]
gi|420978783|ref|ZP_15441960.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0212]
gi|420984167|ref|ZP_15447334.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0728-R]
gi|420989909|ref|ZP_15453065.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0206]
gi|421008972|ref|ZP_15472082.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0119-R]
gi|421014216|ref|ZP_15477293.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0122-R]
gi|421019081|ref|ZP_15482138.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0122-S]
gi|421024768|ref|ZP_15487812.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0731]
gi|421030560|ref|ZP_15493591.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0930-R]
gi|421035505|ref|ZP_15498523.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0930-S]
gi|421041981|ref|ZP_15504989.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0116-R]
gi|421044634|ref|ZP_15507634.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0116-S]
gi|169242579|emb|CAM63607.1| Probable ATP-dependent DEAD-box RNA helicase [Mycobacterium
abscessus]
gi|392063761|gb|EIT89610.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0303]
gi|392065755|gb|EIT91603.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0726-RB]
gi|392069305|gb|EIT95152.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0726-RA]
gi|392110509|gb|EIU36279.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0125-S]
gi|392113156|gb|EIU38925.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0125-R]
gi|392127434|gb|EIU53184.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0728-S]
gi|392129561|gb|EIU55308.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-1108]
gi|392163061|gb|EIU88750.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0212]
gi|392169163|gb|EIU94841.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
6G-0728-R]
gi|392184188|gb|EIV09839.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0206]
gi|392197120|gb|EIV22736.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0119-R]
gi|392199905|gb|EIV25513.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0122-R]
gi|392207711|gb|EIV33288.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0122-S]
gi|392211565|gb|EIV37131.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0731]
gi|392222909|gb|EIV48432.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0116-R]
gi|392223780|gb|EIV49302.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0930-R]
gi|392224000|gb|EIV49521.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0930-S]
gi|392234087|gb|EIV59585.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
4S-0116-S]
gi|392250558|gb|EIV76032.1| DEAD-box ATP-dependent RNA helicase CshA [Mycobacterium abscessus
3A-0810-R]
Length = 490
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALTSFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+FT T + + +L G + I+ L+ TAR KF+ G +LV TDVAARG
Sbjct: 297 VLFTRTVTETQRLAILLRTLGFGAIPIHGQLNQTARLGALNKFRAGSRDILVATDVAARG 356
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP +D VIN++ P +K +VHRVGR ARAG+SG A ++++ +L YL + LG+K
Sbjct: 357 LDIPLVDVVINFDIPSDSKTYVHRVGRTARAGKSGKAITIMTQYDLEIYLRIEAALGKK 415
>gi|395215483|ref|ZP_10400949.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
gi|394455827|gb|EJF10233.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
Length = 476
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L A I + I+ + AR+ + F+ G RVLV TD+AARG
Sbjct: 247 LVFTRTKHGADRVAKDLNKANIQAEAIHGNKSQNARQRALSNFKAGSTRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+ L VINY P + + +VHR+GR RAG +G+A S +E Y D+ + ++
Sbjct: 307 IDVEELSHVINYELPNEPETYVHRIGRTGRAGNAGIALSFCDEEERYYLRDIQKLINKQ 365
>gi|333909234|ref|YP_004482820.1| DEAD/DEAH box helicase domain-containing protein [Marinomonas
posidonica IVIA-Po-181]
gi|333479240|gb|AEF55901.1| DEAD/DEAH box helicase domain protein [Marinomonas posidonica
IVIA-Po-181]
Length = 457
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L AGI ++ I+ + AR A F+ G+IR+LV TD+AARG
Sbjct: 247 LVFSRTKHGANKITKQLEDAGIRASAIHGNKSQGARTRALADFKEGRIRILVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDI L V+N++ P A+ +VHR+GR RA +G A SLVS+DEL
Sbjct: 307 IDIEELPHVVNFDLPDVAEDYVHRIGRTGRANATGQAISLVSADEL 352
>gi|118578871|ref|YP_900121.1| DEAD/DEAH box helicase [Pelobacter propionicus DSM 2379]
gi|118501581|gb|ABK98063.1| DEAD/DEAH box helicase domain protein [Pelobacter propionicus DSM
2379]
Length = 454
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ATK + + + L G + ++ D++ AR + + G IR+LV TDVAARG
Sbjct: 248 IIFSATKRDADELARELSREGHPAAPLHGDMNQFARNKTIERMRKGAIRLLVATDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
+D+ + VIN++ P A+ +VHR+GR RAG SG+A S VS EL Y + F+G+K
Sbjct: 308 LDVNGISHVINFDLPRFAEDYVHRIGRTGRAGASGIAISFVSPSELSYLERIERFIGKK- 366
Query: 123 VLADDSMKG 131
L + +++G
Sbjct: 367 -LPEQNIEG 374
>gi|301310161|ref|ZP_07216100.1| putative ATP-dependent RNA helicase RhlE [Bacteroides sp. 20_3]
gi|423336402|ref|ZP_17314149.1| hypothetical protein HMPREF1059_00101 [Parabacteroides distasonis
CL09T03C24]
gi|300831735|gb|EFK62366.1| putative ATP-dependent RNA helicase RhlE [Bacteroides sp. 20_3]
gi|409240877|gb|EKN33651.1| hypothetical protein HMPREF1059_00101 [Parabacteroides distasonis
CL09T03C24]
Length = 421
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V ++L A I + I+ + TAR+ F+ RVL+ TD+AARG
Sbjct: 248 LIFTRTKHGADKVARVLSKAEIGAEAIHGNKSQTARQRALTNFKDHTTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY P + +VHR+GR RAGR GVA+S ++E+ D+ +G++
Sbjct: 308 IDVDHLTHVINYELPNVPETYVHRIGRTGRAGREGVAFSFCDAEEVPLLKDIQKLIGKEV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PVAGGHM 374
>gi|340785392|ref|YP_004750857.1| ATP-dependent RNA helicase RhlE [Collimonas fungivorans Ter331]
gi|340550659|gb|AEK60034.1| ATP-dependent RNA helicase RhlE [Collimonas fungivorans Ter331]
Length = 433
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF ATKY E++ L AGI + + + AR A F+ K++VLV TDVAARG
Sbjct: 263 LVFVATKYAAEHIADKLHRAGIKAAAFHGEFSQGARDEVLADFKASKLQVLVATDVAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
IDI L V+NY+ P A + HR+GR RAG+SG+A S VS++ ++
Sbjct: 323 IDIAQLPVVLNYDLPRSAVDYTHRIGRTGRAGKSGIAISFVSAETEAHF 371
>gi|288925923|ref|ZP_06419853.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
gi|288337347|gb|EFC75703.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
Length = 375
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + + L I I+ + AR+ F++GK RV+V TD+AARG
Sbjct: 248 LVFSRTKHGADRIARKLKARHIECEAIHGNKSQNARQRALTNFKSGKTRVIVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
IDI +L VINY+ P A+ +VHR+GR RAG SGVA + + DE D+ G+K
Sbjct: 308 IDIANLQMVINYDLPDVAETYVHRIGRTGRAGNSGVALTFCTQDERPMVRDIQKLTGKKL 367
Query: 123 VLADDSMK 130
+A +K
Sbjct: 368 PIAQSPLK 375
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + + +L G + ++ L +AR KF++ +LV TDVAARG
Sbjct: 296 IIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARG 355
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+N++ P +K +VHRVGR ARAG+SGVA S V+ ++ +L + LG+K
Sbjct: 356 LDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKK 414
>gi|115525740|ref|YP_782651.1| DEAD/DEAH box helicase [Rhodopseudomonas palustris BisA53]
gi|115519687|gb|ABJ07671.1| DEAD/DEAH box helicase domain protein [Rhodopseudomonas palustris
BisA53]
Length = 490
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI++ I+ + R+ A F+TG+I LV TD+AARG
Sbjct: 263 LVFTRTKHGADKVVKGLARAGIAAEAIHGNKSQNHRERVLAAFRTGEILTLVATDIAARG 322
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG GVA SL + +EL Y D+
Sbjct: 323 IDVDGVSHVVNFDLPNIPETYVHRIGRTARAGAEGVAISLCAGEELAYLRDI 374
>gi|300783035|ref|YP_003763326.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei U32]
gi|384146259|ref|YP_005529075.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|399534921|ref|YP_006547583.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|299792549|gb|ADJ42924.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei U32]
gi|340524413|gb|AEK39618.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|398315691|gb|AFO74638.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
Length = 598
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F+ TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 317 LTMIFSRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 376
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGIDI + VINY P K +VHR+GR RAGR+GVA +LV DE+ +
Sbjct: 377 RGIDIDDVTHVINYQCPDDEKTYVHRIGRTGRAGRTGVAVTLVDWDEMPRW 427
>gi|372210620|ref|ZP_09498422.1| DEAD/DEAH box helicase [Flavobacteriaceae bacterium S85]
Length = 332
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK+ VE + + L I+ D +AR KF+ +I +L+ TDVAARG
Sbjct: 170 IIFRRTKFGVEKLEQTLLKNNYKVDSIHGDKTQSARTKALNKFKNNEINILIATDVAARG 229
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
IDIP LD VIN++ P + +VHR+GR RAG+ G A S S+DE Y L + +G+
Sbjct: 230 IDIPDLDIVINFDIPNIPESYVHRIGRTGRAGKEGRALSFCSADEKAYILTIQKLIGK 287
>gi|407982755|ref|ZP_11163421.1| helicase conserved C-terminal domain protein [Mycobacterium
hassiacum DSM 44199]
gi|407375643|gb|EKF24593.1| helicase conserved C-terminal domain protein [Mycobacterium
hassiacum DSM 44199]
Length = 517
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG+I VLV TDVAAR
Sbjct: 259 TMIFTRTKRTAQKVADELAERGFKAAAVHGDLGQGAREKALQAFRTGEIDVLVATDVAAR 318
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P + +VHR+GR R G++GVA +LV DEL + +D L LG
Sbjct: 319 GIDIEDVTHVINYQIPEDEQSYVHRIGRTGRKGKAGVAVTLVDWDELTRWALIDKALGLG 378
>gi|333378025|ref|ZP_08469758.1| hypothetical protein HMPREF9456_01353 [Dysgonomonas mossii DSM
22836]
gi|332884045|gb|EGK04325.1| hypothetical protein HMPREF9456_01353 [Dysgonomonas mossii DSM
22836]
Length = 374
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + + ++L AGI S I+ + AR+ F++ K RVL+ TD+AARG
Sbjct: 248 LVFSRTKHGADKIARLLCKAGIGSEAIHGNKSQNARQRALTNFKSQKTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
ID+ L+ VINY+ P + +VHR+GR RAG SG A + S++E D+ G+K
Sbjct: 308 IDVDQLELVINYDLPDVPETYVHRIGRTGRAGNSGTALTFCSAEENAMLNDIQKLTGKK 366
>gi|300023857|ref|YP_003756468.1| DEAD/DEAH box helicase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525678|gb|ADJ24147.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 540
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V ++K L G ++ ++ D+D T+R KF+ G+I +L +DVAARG
Sbjct: 252 IIFCNRKRDVAVLYKSLSKHGFNAGELHGDMDQTSRTETLDKFRNGEIMLLAASDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL-------L 115
+DIP + V N++ P A +VHR+GR RAGR G + SLVS D+L + D+
Sbjct: 312 LDIPDVSHVFNFDLPWAADDYVHRIGRTGRAGREGHSASLVSPDDLKFVADIEKVTGETA 371
Query: 116 LFLGRKPVLAD 126
++LG P D
Sbjct: 372 IWLGDPPSEED 382
>gi|381164531|ref|ZP_09873761.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea NA-128]
gi|379256436|gb|EHY90362.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea NA-128]
Length = 538
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 249 LTMIFTRTKRTAQKVADDLTERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 308
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P K +VHR+GR RAG++GVA +LV DE+ +
Sbjct: 309 RGIDVDDVTHVINYQTPEDEKTYVHRIGRTGRAGKTGVAITLVDWDEIPRW 359
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 37 ARKINA-AKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGR 95
A+++ A KF+ G+ +L+ TDVA+RG+DIPS+D VINY+ P +K ++HRVGR ARAGR
Sbjct: 319 AKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGR 378
Query: 96 SGVAYSLVSSDELCYYLDLLLFLGRK 121
SGVA SLV+ EL +Y+ + +G+K
Sbjct: 379 SGVAISLVNQYELEWYIQIEKLIGKK 404
>gi|222110403|ref|YP_002552667.1| dead/deah box helicase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221729847|gb|ACM32667.1| DEAD/DEAH box helicase domain protein [Acidovorax ebreus TPSY]
Length = 578
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG+IR LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGQIRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P + +VHR+GR RAGR G A SLV DE + +++ F
Sbjct: 311 IDIDDLPHVVNYEIPNVPEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMMEIERF 365
>gi|121594947|ref|YP_986843.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
JS42]
gi|120607027|gb|ABM42767.1| DEAD/DEAH box helicase domain protein [Acidovorax sp. JS42]
Length = 577
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L G+S+ ++ + +AR F+TG+IR LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEYLTKNGVSAMALHGNKSQSARTQALEGFKTGQIRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P + +VHR+GR RAGR G A SLV DE + +++ F
Sbjct: 311 IDIDDLPHVVNYEIPNVPEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMMEIERF 365
>gi|150376621|ref|YP_001313217.1| DEAD/DEAH box helicase [Sinorhizobium medicae WSM419]
gi|150031168|gb|ABR63284.1| DEAD/DEAH box helicase domain protein [Sinorhizobium medicae
WSM419]
Length = 498
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+++VF+ TK+ E + K L G + I+ + R+ F+ G+IRVLV TDVAA
Sbjct: 248 LSLVFSRTKHGAEKLMKHLDQVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVATDVAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
RGIDIP + V NY+ P A +VHR+GR AR GR G+A + + DE+ D+ +G
Sbjct: 308 RGIDIPGVTHVYNYDLPEVADAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIEKLMG 366
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 76/120 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT T + + +L G + ++ L +AR KF++G +LV TDVAAR
Sbjct: 292 TIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRSGSRNILVATDVAAR 351
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DIP++D V+N++ P +K ++HRVGR ARAGRSG A S+V+ E+ + + + LG++
Sbjct: 352 GLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGRSGRAISIVTQYEVEIWQRIEVALGKQ 411
>gi|451340755|ref|ZP_21911241.1| putative ATP-dependent RNA helicase [Amycolatopsis azurea DSM
43854]
gi|449416398|gb|EMD22140.1| putative ATP-dependent RNA helicase [Amycolatopsis azurea DSM
43854]
Length = 529
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 249 LTMIFTRTKRTAQKVADELVERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 308
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI + VINY P K +VHR+GR RAGR+GVA +LV DE
Sbjct: 309 RGIDIDDVTHVINYQTPEDEKTYVHRIGRTGRAGRTGVAITLVDWDE 355
>gi|396081598|gb|AFN83214.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon romaleae
SJ-2008]
Length = 465
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATKY VE + +IL S IYS +D AR+ N F K +LVVTDVAAR
Sbjct: 204 TIVFVATKYAVELLLEILNKNNFESHGIYSSMDDEARRSNFRDFNASKTGILVVTDVAAR 263
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
G+DIP LD V+NY+ C + F+HRVGR GV YS V+ ++ ++ ++
Sbjct: 264 GLDIPCLDTVVNYDL-CDERTFLHRVGRVRGM---GVQYSFVTYTDVFHFFNI 312
>gi|419717844|ref|ZP_14245208.1| ATP-dependent DEAD-box RNA helicase, partial [Mycobacterium
abscessus M94]
gi|382937244|gb|EIC61614.1| ATP-dependent DEAD-box RNA helicase, partial [Mycobacterium
abscessus M94]
Length = 449
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F++G+I VLV TDVAAR
Sbjct: 263 TMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAREKALTSFRSGQINVLVATDVAAR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 323 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDDIARWQLIDKALGLG 382
>gi|449145922|ref|ZP_21776717.1| ATP-dependent RNA helicase [Vibrio mimicus CAIM 602]
gi|449078310|gb|EMB49249.1| ATP-dependent RNA helicase [Vibrio mimicus CAIM 602]
Length = 422
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+N++ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNFDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>gi|418054509|ref|ZP_12692565.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
1NES1]
gi|353212134|gb|EHB77534.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
1NES1]
Length = 532
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V ++K L G ++ ++ D+D T+R KF+ G+I +L +DVAARG
Sbjct: 252 IIFCNRKRDVAVLYKSLSKHGFNAGALHGDMDQTSRMDTLDKFRNGEIMLLAASDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL-------L 115
+DIP + V N++ P A +VHR+GR RAGR G + SLVS D+L + D+
Sbjct: 312 LDIPDVSHVFNFDLPWAADDYVHRIGRTGRAGREGYSASLVSPDDLKFVADIEKVTGETA 371
Query: 116 LFLGRKPVLAD 126
++LG P D
Sbjct: 372 IWLGDPPSEED 382
>gi|170696489|ref|ZP_02887614.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170138592|gb|EDT06795.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 537
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 319 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIKALRERRVRVLVATDVAARG 378
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 379 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 423
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T + + +L G S+ ++ ++ +AR KF+ G +LV TDVAARG
Sbjct: 330 IVFTRTINETQRIAFLLRALGRSAIPLHGQMNQSARLGALNKFRGGSREILVATDVAARG 389
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIPS+D V+N++ P +K +VHRVGR ARAG+SGVA S+V+ ++ Y + LG+K
Sbjct: 390 LDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISVVTQYDIEIYQRIEKALGKK 448
>gi|90416628|ref|ZP_01224559.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
HTCC2207]
gi|90331827|gb|EAS47055.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
HTCC2207]
Length = 549
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K L GI + I+ + AR A F+ G++R+LV TD+AARG
Sbjct: 248 LVFTKTKHGANKLTKHLEAEGIVAAAIHGNKSQGARTKALAGFKAGEVRILVATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
+DI L V+N++ P A+ +VHR+GR RAG +G A SLVS+DE+ D+
Sbjct: 308 LDIEQLPQVVNFDLPNVAEDYVHRIGRTGRAGSTGTAISLVSADEVDLLSDI 359
>gi|418460459|ref|ZP_13031553.1| DNA/RNA helicase, superfamily II, partial [Saccharomonospora azurea
SZMC 14600]
gi|359739435|gb|EHK88301.1| DNA/RNA helicase, superfamily II, partial [Saccharomonospora azurea
SZMC 14600]
Length = 488
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 249 LTMIFTRTKRTAQKVADDLTERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 308
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
RGID+ + VINY P K +VHR+GR RAG++GVA +LV DE+ +
Sbjct: 309 RGIDVDDVTHVINYQTPEDEKTYVHRIGRTGRAGKTGVAITLVDWDEIPRW 359
>gi|345880198|ref|ZP_08831755.1| hypothetical protein HMPREF9431_00419 [Prevotella oulorum F0390]
gi|343923775|gb|EGV34459.1| hypothetical protein HMPREF9431_00419 [Prevotella oulorum F0390]
Length = 544
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 70/117 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K V+ V L I+ ++SDLD R KF++G+ VLV TDV +RG
Sbjct: 249 IIFCGSKMKVKQVAGALQRKHINCGEMHSDLDQATRDDVMFKFKSGQFDVLVATDVISRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLG 119
IDI + VINY+ P A+ +VHR+GR ARA R+G A + VS D+ Y+ + FLG
Sbjct: 309 IDIDDITMVINYDVPHDAEDYVHRIGRTARAARTGTAITFVSEDDAHYFQQIEKFLG 365
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 71/119 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T + + +L G + I+ ++ T R+ KF+ G+ ++LV TDVA+RG
Sbjct: 382 IIFVTTCINSIRLTLMLRNLGFQAVSIHGQMNQTKRQTAINKFKDGQKKILVATDVASRG 441
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP +D VINY P K ++HRVGR ARAGR G A SL+S +L +L + LG K
Sbjct: 442 LDIPCIDLVINYELPANTKEYIHRVGRTARAGRKGNAISLISQYDLEAFLKIEDLLGIK 500
>gi|452952010|gb|EME57445.1| ATP-dependent RNA helicase [Amycolatopsis decaplanina DSM 44594]
Length = 530
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT TK + V L G ++ ++ DL AR+ F++GK+ VLV TDVAA
Sbjct: 249 LTMIFTRTKRTAQKVADELVERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA 308
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI + VINY P K +VHR+GR RAGR+GVA +LV DE
Sbjct: 309 RGIDIDDVTHVINYQTPEDEKTYVHRIGRTGRAGRTGVAITLVDWDE 355
>gi|262381688|ref|ZP_06074826.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_33B]
gi|262296865|gb|EEY84795.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_33B]
Length = 421
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + V ++L A I + I+ + TAR+ F+ RVL+ TD+AARG
Sbjct: 248 LIFTRTKHGADKVARVLSKAEIGAEAIHGNKSQTARQRALTNFKDHTTRVLIATDIAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRKP 122
ID+ L VINY P + +VHR+GR RAGR GVA+S ++E+ D+ +G++
Sbjct: 308 IDVDHLTHVINYELPNVPETYVHRIGRTGRAGREGVAFSFCDAEEVPLLKDIQKLIGKEV 367
Query: 123 VLADDSM 129
+A M
Sbjct: 368 PVAGGHM 374
>gi|238917309|ref|YP_002930826.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
gi|238872669|gb|ACR72379.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
Length = 571
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
++VVF TK V+ + L G + I+ D+ R F++GK +L+ TDVAA
Sbjct: 242 LSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF--- 117
RGID+ +D V NY+ P + +VHR+GR RAG+SG+A S +S E+ D+ +
Sbjct: 302 RGIDVDGVDIVFNYDLPQDEEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCKT 361
Query: 118 -LGRKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADME 166
+ KP+ + D +K DG+F KI + + D+ +++ VE + E
Sbjct: 362 KILAKPIPSLDDVKNT--KMDGIFDKIKEMIEADEHRAMLDMVEEHVNQE 409
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L G + ++ L ++R KF+ G +LV TDVAARG
Sbjct: 304 IIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREILVATDVAARG 363
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
+DIPS+D V+NY+ P +K ++HRVGR ARAG+SG A S+V+ +L ++ + LG+K
Sbjct: 364 LDIPSVDVVLNYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLEIFMRIEAALGKKQ 423
Query: 122 ---PVLADDSMKGKIRHQDG 138
P + D+ M K R ++
Sbjct: 424 VEYPTVKDEVMVFKPRVEEA 443
>gi|323526518|ref|YP_004228671.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323383520|gb|ADX55611.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1001]
Length = 536
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 315 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 374
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 375 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 419
>gi|265754229|ref|ZP_06089418.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|423241599|ref|ZP_17222711.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
gi|263234938|gb|EEZ20493.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|392641052|gb|EIY34840.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + KIL + I + I+ + AR+ F+ RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLAKILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P ++ +VHR+GR RAG G+A S S+EL Y D+ +G +
Sbjct: 305 IDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLIGLQI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|39936732|ref|NP_949008.1| ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009]
gi|192292558|ref|YP_001993163.1| DEAD/DEAH box helicase [Rhodopseudomonas palustris TIE-1]
gi|39650588|emb|CAE29111.1| putative ATP-dependent RNA helicase [Rhodopseudomonas palustris
CGA009]
gi|192286307|gb|ACF02688.1| DEAD/DEAH box helicase domain protein [Rhodopseudomonas palustris
TIE-1]
Length = 474
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 71/112 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L AGI++ I+ + R+ A F+TG++R LV TD+AARG
Sbjct: 256 LVFTRTKHGADKVVKGLARAGITADAIHGNKSQNYRERVLAAFRTGELRTLVATDIAARG 315
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL 114
ID+ + V+N++ P + +VHR+GR ARAG G A SL + +E+ Y D+
Sbjct: 316 IDVDGVSHVVNFDLPNIPETYVHRIGRTARAGADGTAISLCAGEEMAYLRDI 367
>gi|307729303|ref|YP_003906527.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583838|gb|ADN57236.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 530
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 316 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 375
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 376 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 420
>gi|398804512|ref|ZP_10563506.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398093685|gb|EJL84061.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 575
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 68/115 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ V + L GI + ++ + TAR A F++G IR LV TD+AARG
Sbjct: 251 LVFTRTKFGANNVAEHLTKHGIPAMALHGNKSQTARTQALADFKSGTIRALVATDIAARG 310
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF 117
IDI L V+NY P ++ +VHR+GR RAG SG A SLV DE + D+ F
Sbjct: 311 IDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGFMQDIERF 365
>gi|226184801|dbj|BAH32905.1| putative ATP-dependent RNA helicase [Rhodococcus erythropolis PR4]
Length = 474
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ F+ GK+ VLV TDVAAR
Sbjct: 223 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAAR 282
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 283 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLG 342
>gi|305667396|ref|YP_003863683.1| DEAD/DEAH box helicase-like protein [Maribacter sp. HTCC2170]
gi|88709444|gb|EAR01677.1| DEAD/DEAH box helicase-like protein [Maribacter sp. HTCC2170]
Length = 432
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K LG A I+S I+ + TAR+ F+ G+++VL+ TD+AARG
Sbjct: 249 LVFSRTKHGANKIVKKLGQADIASAAIHGNKSQTARQKALGDFKAGELKVLIATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L V+N++ P + +VHR+GR RA SG+A S DE Y D+ + ++
Sbjct: 309 IDVDDLALVVNFDLPNVPETYVHRIGRTGRASASGIAISFCDRDEQPYLRDIEKLIKQQV 368
Query: 122 ------PVLADDSMK 130
P ++DDS +
Sbjct: 369 PRMPEHPFISDDSTE 383
>gi|262403813|ref|ZP_06080371.1| ATP-dependent RNA helicase [Vibrio sp. RC586]
gi|262350317|gb|EEY99452.1| ATP-dependent RNA helicase [Vibrio sp. RC586]
Length = 421
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLVGLAVSLLSHDE 359
>gi|212690559|ref|ZP_03298687.1| hypothetical protein BACDOR_00044 [Bacteroides dorei DSM 17855]
gi|212666908|gb|EEB27480.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
Length = 434
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + KIL + I + I+ + AR+ F+ RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLAKILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P ++ +VHR+GR RAG G+A S S+EL Y D+ +G +
Sbjct: 305 IDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLIGLQI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|212555159|gb|ACJ27613.1| Helicase, DEAD box [Shewanella piezotolerans WP3]
Length = 482
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 72/116 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GI++ I+ + AR A+F++G +RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKNLDAKGITAAAIHGNKSQGARTKALAEFKSGDVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
+DI L V+N++ P + +VHR+GR RAG +G A SLVS +E+ D+ L +
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSDEEIKLLRDIELLI 362
>gi|423229947|ref|ZP_17216352.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|423247037|ref|ZP_17228088.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
gi|392632157|gb|EIY26120.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|392633650|gb|EIY27591.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
Length = 434
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + KIL + I + I+ + AR+ F+ RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLAKILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P ++ +VHR+GR RAG G+A S S+EL Y D+ +G +
Sbjct: 305 IDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLIGLQI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|350545971|ref|ZP_08915408.1| ATP-dependent RNA helicase NGO0650 [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526259|emb|CCD40935.1| ATP-dependent RNA helicase NGO0650 [Candidatus Burkholderia kirkii
UZHbot1]
Length = 544
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 372 IVFTATKSDADLIANRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 431
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDIP + V NY+ P A+ +VHR+GR RAGRSG A SLV E+
Sbjct: 432 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHYAEM 477
>gi|389806354|ref|ZP_10203485.1| ATP-dependent RNA helicase [Rhodanobacter thiooxydans LCS2]
gi|388445574|gb|EIM01638.1| ATP-dependent RNA helicase [Rhodanobacter thiooxydans LCS2]
Length = 442
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF+ TK+ + + L +G+ + I+ + AR A F++G++ VLV TD+AAR
Sbjct: 246 TLVFSRTKHGADKLVTFLNASGLRAAAIHGNKSQNARTRALADFKSGRVTVLVATDIAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFL 118
GIDI L VIN++ P A+ +VHR+GR RAG G+A SLVS DE D+ L
Sbjct: 306 GIDIEQLPIVINFDLPSVAEDYVHRIGRTGRAGMEGLALSLVSHDESGLLFDIRKLL 362
>gi|328948067|ref|YP_004365404.1| DEAD/DEAH box helicase [Treponema succinifaciens DSM 2489]
gi|328448391|gb|AEB14107.1| DEAD/DEAH box helicase domain protein [Treponema succinifaciens DSM
2489]
Length = 534
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK E V K L + G S +I DL R KF+ G I+ LV TDVAARG
Sbjct: 247 IVFCNTKKSCEIVAKRLKMNGFESEFIIGDLPQKKRLTIMDKFKAGAIKCLVATDVAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY+ P +A+ +VHR+GR ARAG+SG A++ S ++ + ++ +
Sbjct: 307 IDVNDLAMVINYDLPNEAENYVHRIGRTARAGKSGKAFTFCSEQDVYSLPPIERYIEKSI 366
Query: 122 -PVLADDSM 129
+AD+SM
Sbjct: 367 PSCVADESM 375
>gi|187924463|ref|YP_001896105.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187715657|gb|ACD16881.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 542
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 316 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 375
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 376 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 420
>gi|452946083|gb|EME51584.1| dead/deah box helicase [Rhodococcus ruber BKS 20-38]
Length = 538
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ KF+ GKI VLV TDVAAR
Sbjct: 293 TMIFTRTKRTAQKVADELAERGFAVGAVHGDLGQIAREKALDKFRKGKIDVLVATDVAAR 352
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + V+NY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 353 GIDIDDVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALDLG 412
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT T + + + +L G + ++ L +AR KF++G +LV TDVAAR
Sbjct: 300 TIVFTRTVWETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFRSGTRDILVATDVAAR 359
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
G+DI +D V+NY+ P +K ++HRVGR ARAG+SG+A SLV+ ++ + + LG+K
Sbjct: 360 GLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISLVTQYDIEIFQRIEAALGKK 419
>gi|257456960|ref|ZP_05622141.1| ATP-dependent RNA helicase DbpA [Treponema vincentii ATCC 35580]
gi|257445669|gb|EEV20731.1| ATP-dependent RNA helicase DbpA [Treponema vincentii ATCC 35580]
Length = 605
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK E V K L + G ++ ++ DL R F+ GK+ LV TDVAAR
Sbjct: 257 TIIFCNTKKTTEIVAKRLRINGYATEFLIGDLPQPKRLHIIDSFKAGKLTCLVATDVAAR 316
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
GIDI L VINY+ P +A+ +VHR+GR ARAG++G AYSL S ++ D+ ++ K
Sbjct: 317 GIDINDLAMVINYDLPNEAENYVHRIGRTARAGKTGAAYSLCSEQDVYNLPDIEKYIEAK 376
Query: 122 -PVL 124
PV+
Sbjct: 377 IPVV 380
>gi|149910407|ref|ZP_01899049.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
gi|149806555|gb|EDM66524.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
Length = 460
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTATK E + K+L I +T I+ D+ RK F+ G++ VLV TDVAARG
Sbjct: 250 LIFTATKLDTERLAKLLMDNDIDATSIHGDMLQNQRKRTLEDFRRGRVGVLVATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY 111
+DI +L VIN++ P + F+HR GR RAG +G+A SLVS + +
Sbjct: 310 LDIRTLSHVINFDLPINPEDFIHRTGRTGRAGATGIAISLVSPKDWTSF 358
>gi|441514562|ref|ZP_20996379.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
gi|441450631|dbj|GAC54340.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
Length = 536
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L G ++ DL AR+ +F+ G I VLV TDVAAR
Sbjct: 279 TMVFTRTKRTAQKVADDLAERGFKVGAVHGDLGQIAREKALKRFRDGAIDVLVATDVAAR 338
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV DEL + +D L LG
Sbjct: 339 GIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRWELIDKALGLG 398
>gi|385209074|ref|ZP_10035942.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385181412|gb|EIF30688.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 539
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 319 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 378
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 379 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 423
>gi|427403697|ref|ZP_18894579.1| hypothetical protein HMPREF9710_04175 [Massilia timonae CCUG 45783]
gi|425717680|gb|EKU80636.1| hypothetical protein HMPREF9710_04175 [Massilia timonae CCUG 45783]
Length = 539
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVFTATK + + L +AG ++ ++ D+ AR + G ++VLV TDVAARG
Sbjct: 280 VVFTATKRDADMIADRLNIAGFAAAALHGDMHQGARNRTLDSLRRGSVKVLVATDVAARG 339
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+P++ V+NY+ P + +VHR+GR RAGR+G A SLV+ E
Sbjct: 340 IDVPNITHVVNYDLPKFPEDYVHRIGRTGRAGRNGTAISLVNHAE 384
>gi|295676852|ref|YP_003605376.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295436695|gb|ADG15865.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 544
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 304 IVFTATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 363
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP + V NY+ P A+ +VHR+GR RAGRSG+A SLV E
Sbjct: 364 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAE 408
>gi|237707985|ref|ZP_04538466.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
gi|229457971|gb|EEO63692.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
Length = 434
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + KIL + I + I+ + AR+ F+ RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLAKILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P ++ +VHR+GR RAG G+A S S+EL Y D+ +G +
Sbjct: 305 IDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLIGLQI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|409198747|ref|ZP_11227410.1| DEAD/DEAH box helicase [Marinilabilia salmonicolor JCM 21150]
Length = 414
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK E V K L + S I+SD D T R +F +GK ++L+ TDV+ARG
Sbjct: 248 LVFVRTKVRAERVMKALERVNLQSQTIHSDKDQTERNQVMEQFSSGKNKILIATDVSARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DIP +D VINY+ P + + +VHRVGR R + G+A + S +E + FL RK
Sbjct: 308 VDIPDVDIVINYDIPEETENYVHRVGRTGRGQKRGLAIAFCSPEEKERLEAIESFLNRK 366
>gi|407277792|ref|ZP_11106262.1| dead/deah box helicase [Rhodococcus sp. P14]
Length = 538
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ KF+ GKI VLV TDVAAR
Sbjct: 293 TMIFTRTKRTAQKVADELAERGFAVGAVHGDLGQIAREKALDKFRKGKIDVLVATDVAAR 352
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + V+NY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 353 GIDIDDVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALDLG 412
>gi|338737945|ref|YP_004674907.1| RNA helicase [Hyphomicrobium sp. MC1]
gi|337758508|emb|CCB64333.1| RNA helicase [Hyphomicrobium sp. MC1]
Length = 542
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V +HK L G ++ ++ D+D T+R KF+ G+I +L +DVAARG
Sbjct: 252 IIFCNRKRDVAVLHKSLTKHGFNAGALHGDMDQTSRMETLDKFRAGEIMLLAASDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDL-------L 115
+DIP + V N++ P A +VHR+GR RAG G + SLVS D+L + D+
Sbjct: 312 LDIPEVSHVFNFDLPWAADDYVHRIGRTGRAGHEGHSISLVSPDDLKFVKDIEKITGETA 371
Query: 116 LFLGRKPVLAD 126
++LG P D
Sbjct: 372 VWLGEPPSEED 382
>gi|345515892|ref|ZP_08795389.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
gi|229436523|gb|EEO46600.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
Length = 434
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + KIL + I + I+ + AR+ F+ RVL+ TD+AARG
Sbjct: 245 LIFTRTKHGADKLAKILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLIATDIAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK- 121
ID+ L VINY P ++ +VHR+GR RAG G+A S S+EL Y D+ +G +
Sbjct: 305 IDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDIQKLIGLQI 364
Query: 122 PVLAD 126
PV+ D
Sbjct: 365 PVVKD 369
>gi|88812119|ref|ZP_01127371.1| probable atp-dependent rna helicase protein [Nitrococcus mobilis
Nb-231]
gi|88790623|gb|EAR21738.1| probable atp-dependent rna helicase protein [Nitrococcus mobilis
Nb-231]
Length = 429
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + L G+++T I+S +AR F+ G++RVLV TD+AARG
Sbjct: 246 LVFTRTKHGANRLATQLDRDGLNATAIHSSKSQSARTKALQDFKRGRVRVLVATDIAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGRK 121
+DI +L V+NY A+ +VHR+GR RAG G A SLVS+DE + ++ LGR+
Sbjct: 306 LDIEALPHVVNYELSNIAEDYVHRIGRTGRAGSQGQAVSLVSADERKHLANIERLLGRR 364
>gi|296112376|ref|YP_003626314.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis RH4]
gi|295920070|gb|ADG60421.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
catarrhalis BBH18]
Length = 577
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
V+F ATK E + L AG + Y++ DL R + ++GK +LV TDVAA
Sbjct: 260 QAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKSGKCDLLVATDVAA 319
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGIDI ++ VINY+ P + + +VHR+GRC RAGR+GVA +L S D+
Sbjct: 320 RGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSIDD 366
>gi|453069932|ref|ZP_21973185.1| ATP-dependent RNA helicase [Rhodococcus qingshengii BKS 20-40]
gi|452762477|gb|EME20773.1| ATP-dependent RNA helicase [Rhodococcus qingshengii BKS 20-40]
Length = 474
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G S ++ DL AR+ F+ GK+ VLV TDVAAR
Sbjct: 223 TMIFTRTKRTAQKVADDLAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAAR 282
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYY--LDLLLFLG 119
GIDI + VINY P K +VHR+GR RAGR+G+A +LV D++ + +D L LG
Sbjct: 283 GIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLG 342
>gi|410611270|ref|ZP_11322369.1| ATP-dependent RNA helicase rhlB [Glaciecola psychrophila 170]
gi|410169121|dbj|GAC36258.1| ATP-dependent RNA helicase rhlB [Glaciecola psychrophila 170]
Length = 438
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L GISS I+ + AR A F+ GK++ L+ TD+AARG
Sbjct: 247 LVFSRTKHGANRIAKQLEAHGISSAAIHGNKSQGARTKALADFKQGKVKALIATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLF----- 117
+DI L V+N++ P + +VHR+GR RAG +G A S+V+ DE +D+ +
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAISMVTQDEFKELVDIEILIKQLI 366
Query: 118 ------------------LGRKPVLADDSMKGKIRHQDG 138
LG++P+ A + + H+DG
Sbjct: 367 QRKITPGFEPTQPLPESKLGQRPIKAKKPKQAQSGHRDG 405
>gi|24375277|ref|NP_719320.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
gi|24350080|gb|AAN56764.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
Length = 535
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L A IS+ I+ + AR A F++G++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR 120
+DI L V+N++ P + +VHR+GR RAG +G A SLVSS+E+ D+ + R
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIERLINR 364
>gi|413962917|ref|ZP_11402144.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
gi|413928749|gb|EKS68037.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
Length = 548
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTATK + + L AG S ++ DL AR + ++RVLV TDVAARG
Sbjct: 306 IVFTATKSDADLIANRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARG 365
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEL 108
IDIP + V NY+ P A+ +VHR+GR RAGRSG A SLV E+
Sbjct: 366 IDIPGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHYAEM 411
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,676,195,982
Number of Sequences: 23463169
Number of extensions: 141886617
Number of successful extensions: 382336
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 30918
Number of HSP's successfully gapped in prelim test: 2897
Number of HSP's that attempted gapping in prelim test: 347903
Number of HSP's gapped (non-prelim): 35465
length of query: 251
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 112
effective length of database: 9,097,814,876
effective search space: 1018955266112
effective search space used: 1018955266112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)