Your job contains 1 sequence.
>psy18034
MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA
RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDELCYYLDLLLFLGR
KPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV
KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLEFGKA
RFIIINIYYVY
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18034
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NTK9 - symbol:DDX54 "Uncharacterized protein"... 562 3.7e-54 1
UNIPROTKB|E1BGI6 - symbol:DDX54 "Uncharacterized protein"... 543 8.9e-52 1
RGD|1562539 - symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box po... 543 1.1e-51 1
MGI|MGI:1919240 - symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) bo... 541 1.5e-51 1
UNIPROTKB|Q8TDD1 - symbol:DDX54 "ATP-dependent RNA helica... 538 3.3e-51 1
UNIPROTKB|F6UKZ0 - symbol:DDX54 "Uncharacterized protein"... 523 2.8e-50 1
UNIPROTKB|E2QSR5 - symbol:DDX54 "Uncharacterized protein"... 523 1.7e-49 1
ZFIN|ZDB-GENE-021220-2 - symbol:ddx54 "DEAD (Asp-Glu-Ala-... 520 2.7e-49 1
DICTYBASE|DDB_G0292992 - symbol:helA "putative RNA helica... 509 1.0e-47 1
ZFIN|ZDB-GENE-050706-47 - symbol:zgc:111908 "zgc:111908" ... 472 7.1e-45 1
WB|WBGene00022378 - symbol:Y94H6A.5 species:6239 "Caenorh... 460 9.8e-43 1
FB|FBgn0052344 - symbol:CG32344 species:7227 "Drosophila ... 450 9.9e-42 1
ASPGD|ASPL0000054300 - symbol:AN0583 species:162425 "Emer... 443 8.4e-41 1
POMBASE|SPAC31A2.07c - symbol:dbp10 "ATP-dependent RNA he... 408 3.8e-37 1
SGD|S000002189 - symbol:DBP10 "Putative ATP-dependent RNA... 284 4.6e-31 2
CGD|CAL0003464 - symbol:orf19.5991 species:5476 "Candida ... 320 1.2e-28 2
UNIPROTKB|F1RKB2 - symbol:DDX54 "Uncharacterized protein"... 309 1.2e-26 1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 243 4.1e-20 1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr... 245 4.1e-20 1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas... 232 6.0e-19 1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he... 232 6.0e-19 1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ... 221 9.3e-19 2
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel... 230 1.0e-18 1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he... 230 1.0e-18 1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 230 2.1e-18 1
UNIPROTKB|Q9KLH6 - symbol:VC_A0768 "ATP-dependent RNA hel... 226 2.9e-18 1
TIGR_CMR|VC_A0768 - symbol:VC_A0768 "ATP-dependent RNA he... 226 2.9e-18 1
TIGR_CMR|CPS_1125 - symbol:CPS_1125 "ATP-dependent RNA he... 211 3.2e-18 2
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h... 214 3.3e-18 2
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he... 222 1.0e-17 1
UNIPROTKB|O05855 - symbol:rhlE "PROBABLE ATP-DEPENDENT RN... 222 1.5e-17 1
POMBASE|SPAC823.08c - symbol:SPAC823.08c "ATP-dependent R... 202 1.5e-17 2
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 220 1.8e-17 1
UNIPROTKB|I3LIB1 - symbol:LOC100625841 "Uncharacterized p... 218 2.6e-17 1
DICTYBASE|DDB_G0280147 - symbol:ddx47 "DEAD/DEAH box heli... 220 2.7e-17 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 218 3.0e-17 1
TAIR|locus:2173517 - symbol:AT5G60990 species:3702 "Arabi... 217 3.6e-17 1
ASPGD|ASPL0000072637 - symbol:AN4903 species:162425 "Emer... 217 5.1e-17 1
UNIPROTKB|Q96GQ7 - symbol:DDX27 "Probable ATP-dependent R... 220 5.3e-17 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 219 6.7e-17 1
UNIPROTKB|A1A4H6 - symbol:DDX27 "Probable ATP-dependent R... 218 8.2e-17 1
UNIPROTKB|F1NQV5 - symbol:DDX27 "Uncharacterized protein"... 217 1.0e-16 1
UNIPROTKB|E1C187 - symbol:DDX27 "Uncharacterized protein"... 217 1.0e-16 1
MGI|MGI:2385884 - symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) bo... 217 1.0e-16 1
GENEDB_PFALCIPARUM|MAL8P1.19 - symbol:MAL8P1.19 "RNA heli... 196 1.3e-16 2
UNIPROTKB|Q8IBA2 - symbol:MAL8P1.19 "RNA helicase, putati... 196 1.3e-16 2
UNIPROTKB|F1Q073 - symbol:DDX27 "Uncharacterized protein"... 216 1.4e-16 1
UNIPROTKB|J9P9C6 - symbol:DDX27 "Uncharacterized protein"... 216 1.4e-16 1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 213 1.5e-16 1
DICTYBASE|DDB_G0270396 - symbol:ddx49 "DEAD/DEAH box heli... 212 1.7e-16 1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 197 1.7e-16 2
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 209 1.8e-16 1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he... 210 2.0e-16 1
WB|WBGene00022148 - symbol:Y71G12B.8 species:6239 "Caenor... 214 2.1e-16 1
UNIPROTKB|Q8EGU0 - symbol:SO_1501 "ATP-dependent RNA heli... 210 2.1e-16 1
TIGR_CMR|SO_1501 - symbol:SO_1501 "ATP-dependent RNA heli... 210 2.1e-16 1
UNIPROTKB|Q9KKW0 - symbol:VCA0990 "ATP-dependent RNA heli... 209 2.3e-16 1
TIGR_CMR|VC_A0990 - symbol:VC_A0990 "ATP-dependent RNA he... 209 2.3e-16 1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 209 2.6e-16 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 209 2.9e-16 1
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 213 3.0e-16 1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel... 208 3.4e-16 1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he... 208 3.4e-16 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 208 3.5e-16 1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN... 208 4.3e-16 1
ZFIN|ZDB-GENE-031001-8 - symbol:ddx27 "DEAD (Asp-Glu-Ala-... 211 4.7e-16 1
UNIPROTKB|Q485I3 - symbol:dbpA "ATP-dependent RNA helicas... 207 4.8e-16 1
TIGR_CMR|CPS_1540 - symbol:CPS_1540 "ATP-dependent RNA he... 207 4.8e-16 1
UNIPROTKB|I3LQ10 - symbol:LOC100626268 "Uncharacterized p... 210 4.9e-16 1
CGD|CAL0000864 - symbol:DRS1 species:5476 "Candida albica... 208 6.7e-16 1
UNIPROTKB|Q5ACK7 - symbol:DRS1 "ATP-dependent RNA helicas... 208 6.7e-16 1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN... 206 6.8e-16 1
FB|FBgn0021995 - symbol:Rs1 "Rs1" species:7227 "Drosophil... 209 7.8e-16 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 204 8.2e-16 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 204 8.2e-16 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 205 8.8e-16 1
ZFIN|ZDB-GENE-031030-3 - symbol:ddx49 "DEAD (Asp-Glu-Ala-... 204 1.0e-15 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.0e-15 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.0e-15 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.0e-15 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.0e-15 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.0e-15 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 205 1.0e-15 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 205 1.1e-15 1
UNIPROTKB|F1NA53 - symbol:DDX49 "Uncharacterized protein"... 202 1.1e-15 1
UNIPROTKB|Q9KU63 - symbol:VC_0660 "ATP-dependent RNA heli... 202 1.3e-15 1
TIGR_CMR|VC_0660 - symbol:VC_0660 "ATP-dependent RNA heli... 202 1.3e-15 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 204 1.3e-15 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 204 1.3e-15 1
CGD|CAL0004058 - symbol:DBP8 species:5476 "Candida albica... 202 1.4e-15 1
UNIPROTKB|Q8EHT1 - symbol:SO_1136 "ATP-dependent RNA heli... 202 1.5e-15 1
TIGR_CMR|SO_1136 - symbol:SO_1136 "ATP-dependent RNA heli... 202 1.5e-15 1
UNIPROTKB|P21693 - symbol:dbpA species:83333 "Escherichia... 202 1.6e-15 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 204 1.7e-15 1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he... 202 1.7e-15 1
UNIPROTKB|F1NYX0 - symbol:DDX49 "Uncharacterized protein"... 202 1.8e-15 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 200 1.8e-15 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 200 2.0e-15 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 200 2.0e-15 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 200 2.0e-15 1
WARNING: Descriptions of 673 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 562 (202.9 bits), Expect = 3.7e-54, P = 3.7e-54
Identities = 116/249 (46%), Positives = 163/249 (65%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L GI T+IYS LD TARKIN AKF GK +VL+VTDVAAR
Sbjct: 280 TVVFVATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCQVLLVTDVAAR 339
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K+KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 340 GLDIPMLDNVINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEMPYIFDLHLFLGRP 399
Query: 122 PVLAD-DSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
+LA M DG+ G++PQ L++D+ ++ E +++ +++ +NA K+Y+
Sbjct: 400 LILAGAQEMPAGAADADGVLGRVPQSLVDDEECLLLTDHEGSLELQSLRRVADNAQKQYL 459
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFGK 239
+SRPG S ES+K+VKE++L+ + +HPLF + E E+ L+ + Y+ +T+ E
Sbjct: 460 RSRPGPSPESIKRVKEMDLSQLGIHPLFSAHFEDTELERLKLVDSIKAYKSKATIFEINS 519
Query: 240 -ARFIIINI 247
AR + +I
Sbjct: 520 TARTLASSI 528
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 543 (196.2 bits), Expect = 8.9e-52, P = 8.9e-52
Identities = 111/238 (46%), Positives = 154/238 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN A+F GK L+VTD+AAR
Sbjct: 341 TVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAAR 400
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 401 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRA 460
Query: 122 PVLA--DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKY 179
LA + G DG+ G++PQG+++D+ + +E ++ G+ + NNA ++Y
Sbjct: 461 LTLARPPEEPSGT-EGGDGVLGRVPQGVVDDEDCGLRTSLEASLELRGLSRVANNAQQQY 519
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
V+SRP S ES+K+ KEL+LA + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 520 VRSRPAPSPESIKRAKELDLAGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFE 577
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 543 (196.2 bits), Expect = 1.1e-51, P = 1.1e-51
Identities = 110/239 (46%), Positives = 156/239 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AARG
Sbjct: 341 VVFVATKHHAEYLTELLTGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARG 400
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 401 LDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSV 460
Query: 123 VLA----DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + S G + +DG+ G++PQ +++D+ S + ++ +++G+Q+ NNA ++
Sbjct: 461 TLARPHEEPSSAGAVG-RDGVLGRVPQSVVDDEDSSLQTALQASLELQGLQRVANNAQQQ 519
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
Y++SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 520 YLRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 578
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 541 (195.5 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 110/239 (46%), Positives = 153/239 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L G+S +IYS LD TARKIN AKF K L+VTD+AAR
Sbjct: 340 TVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAAR 399
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 400 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRS 459
Query: 122 PVLADDSMKGKIRH---QDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
LA + + +DG+ G++PQ +++D+ S + + D++G+ + NNA ++
Sbjct: 460 VTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQQ 519
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
YV+SRP S ES+K+ KEL+LA + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 520 YVRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFE 578
>UNIPROTKB|Q8TDD1 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006396
"RNA processing" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 GO:GO:0030520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
EMBL:AF478457 EMBL:AC089999 EMBL:AY148094 EMBL:BC005848
IPI:IPI00152510 IPI:IPI00879999 RefSeq:NP_001104792.1
RefSeq:NP_076977.3 UniGene:Hs.506861 ProteinModelPortal:Q8TDD1
SMR:Q8TDD1 IntAct:Q8TDD1 STRING:Q8TDD1 PhosphoSite:Q8TDD1
DMDM:46576615 SWISS-2DPAGE:Q8TDD1 PaxDb:Q8TDD1 PRIDE:Q8TDD1
DNASU:79039 Ensembl:ENST00000306014 Ensembl:ENST00000314045
GeneID:79039 KEGG:hsa:79039 UCSC:uc001tup.3 UCSC:uc001tuq.4
CTD:79039 GeneCards:GC12M113595 HGNC:HGNC:20084 HPA:HPA028244
MIM:611665 neXtProt:NX_Q8TDD1 PharmGKB:PA134992026
HOVERGEN:HBG051333 InParanoid:Q8TDD1 ChiTaRS:DDX54 GenomeRNAi:79039
NextBio:67773 ArrayExpress:Q8TDD1 Bgee:Q8TDD1 CleanEx:HS_DDX54
Genevestigator:Q8TDD1 GermOnline:ENSG00000123064 Uniprot:Q8TDD1
Length = 881
Score = 538 (194.4 bits), Expect = 3.3e-51, P = 3.3e-51
Identities = 108/237 (45%), Positives = 154/237 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L +S +IYS LDPTARKIN AKF GK L+VTD+AAR
Sbjct: 341 TVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAAR 400
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 401 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRS 460
Query: 122 PVLADDSMKGK-IRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
LA + + DGM G++PQ +++++ S + + +E ++ G+ + +NA ++YV
Sbjct: 461 LTLARPLKEPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYV 520
Query: 181 KSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
+SRP S ES+K+ KE++L + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 521 RSRPAPSPESIKRAKEMDLVGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRATIFE 577
>UNIPROTKB|F6UKZ0 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR012541 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003723 GO:GO:0004386
GeneTree:ENSGT00550000075100 Ensembl:ENSCAFT00000014352
EMBL:AAEX03014687 EMBL:AAEX03014686 OMA:FEINTSS Uniprot:F6UKZ0
Length = 569
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 108/236 (45%), Positives = 152/236 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L G+S T+IYS LD TARKIN AKF K L+VTD+AAR
Sbjct: 34 TVVFVATKHHAEYLSELLTTQGVSCTHIYSALDQTARKINLAKFTHNKCSALIVTDLAAR 93
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 94 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRA 153
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A +G + DG+ G++PQ +++D+ S + + + ++ G+ + +NA ++YV+
Sbjct: 154 LTPARPH-EGSLG-VDGVLGRVPQSVVDDEESGLQSILTSSLELGGLSRVADNAQQQYVR 211
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES+K+ KEL+L + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 212 SRPAPSPESIKRAKELDLTGLGLHPLFSSRFEEKELQRLKLVDSIKNYRSRATIFE 267
>UNIPROTKB|E2QSR5 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
Ensembl:ENSCAFT00000014352 Uniprot:E2QSR5
Length = 912
Score = 523 (189.2 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 108/236 (45%), Positives = 152/236 (64%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+H EY+ ++L G+S T+IYS LD TARKIN AKF K L+VTD+AAR
Sbjct: 339 TVVFVATKHHAEYLSELLTTQGVSCTHIYSALDQTARKINLAKFTHNKCSALIVTDLAAR 398
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR
Sbjct: 399 GLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRA 458
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
A +G + DG+ G++PQ +++D+ S + + + ++ G+ + +NA ++YV+
Sbjct: 459 LTPARPH-EGSLG-VDGVLGRVPQSVVDDEESGLQSILTSSLELGGLSRVADNAQQQYVR 516
Query: 182 SRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
SRP S ES+K+ KEL+L + +HPLF + E ++ L+ + YR +T+ E
Sbjct: 517 SRPAPSPESIKRAKELDLTGLGLHPLFSSRFEEKELQRLKLVDSIKNYRSRATIFE 572
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 520 (188.1 bits), Expect = 2.7e-49, P = 2.7e-49
Identities = 106/240 (44%), Positives = 150/240 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ ++L G+ + IYS LD TARKI+ +F K+ +L+VTDVAAR
Sbjct: 323 TVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAAR 382
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP LD VINYNFPCK KLF+HRVGR ARAGR G AYSLV DE GR
Sbjct: 383 GIDIPLLDNVINYNFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHLFLGRP 442
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA + DG+FG++PQ +++D+ +++ + D++ +++ NAYK+Y+K
Sbjct: 443 MQLAHPE---HTQEADGVFGRVPQSVLDDEECQLITAHQNSLDLQNLRRVSENAYKQYLK 499
Query: 182 SRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFGKA 240
SRP S ES+K+ + +L M VHPL + E ++ ++ + Y+ ST+ E +
Sbjct: 500 SRPVPSAESIKRSRNTQLTDMAVHPLLGCGLEKMELDRLLMVDTIKGYKAKSTIFEINSS 559
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 509 (184.2 bits), Expect = 1.0e-47, P = 1.0e-47
Identities = 109/239 (45%), Positives = 160/239 (66%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TKYHVE++H +L AGI+STYI+ LDP ARKIN AKF++ ++ V+VVTD+AAR
Sbjct: 500 TIIFVSTKYHVEFIHILLERAGIASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAAR 559
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP LD VIN++FP K K+F+HRVGR ARAGRSG+AYSLVS DE GRK
Sbjct: 560 GIDIPLLDNVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVSPDEVPYMIDLHLYLGRK 619
Query: 122 PVLADDSMKGKIRHQD--GMFGKIPQGLMEDQISEIMNWVELDA-DMEGIQKTCNNAYKK 178
L +G+ + +G IPQ ++ D+ +E +N + ++ + KT +NA+KK
Sbjct: 620 -FLNKFQYEGQTINDPKYSFYGTIPQTII-DRETEFVNVQRKECIELLSLTKTIHNAHKK 677
Query: 179 YVKSRPGASVESVKKVKELELATMQVHPLFRN-IGSAEQEKFNLLTKMSEYRPPSTVLE 236
Y+ +RPGAS ES ++ K ++ + + HP+ + + S +Q + + + + +RPP TVLE
Sbjct: 678 YLSTRPGASHESNRRAKLMDKS--KYHPMLSDHLNSNDQIRNDFIQSLKSFRPPQTVLE 734
>ZFIN|ZDB-GENE-050706-47 [details] [associations]
symbol:zgc:111908 "zgc:111908" species:7955 "Danio
rerio" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-47 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
eggNOG:COG0513 HOGENOM:HOG000246455 HOVERGEN:HBG051333
EMBL:BC098602 IPI:IPI00634979 ProteinModelPortal:Q4KME7
STRING:Q4KME7 PRIDE:Q4KME7 ArrayExpress:Q4KME7 Bgee:Q4KME7
Uniprot:Q4KME7
Length = 511
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 101/240 (42%), Positives = 144/240 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF ATK+HVEY+ ++L G+ + IYS LD TARKI+ F K+ +L+VTDVAAR
Sbjct: 175 TVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGGFVHRKVMLLLVTDVAAR 234
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP LD VINYNFPCK KLF+HRVGR ARAGR G AYSLV DE GR
Sbjct: 235 GIDIPLLDNVINYNFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHRFLGRP 294
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
LA + DG+FG++PQ +++D+ +++ + D++ +++ NAYK+Y+K
Sbjct: 295 MQLAHPE---HTQEADGVFGRVPQSVLDDEECQLITAHQNSLDLQNLRRVSENAYKQYLK 351
Query: 182 SRPGASVESVKKVKELELATMQVHPLFR-NIGSAEQEKFNLLTKMSEYRPPSTVLEFGKA 240
S +K+ + +L M VHPL + E ++ ++ + Y+ ST+ E +
Sbjct: 352 S--------IKRSRNTQLTDMAVHPLLGCGLEKMELDRLLMVDTIKGYKAKSTIFEINSS 403
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 460 (167.0 bits), Expect = 9.8e-43, P = 9.8e-43
Identities = 103/245 (42%), Positives = 151/245 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF AT HVEYV IL AGI +++YS LD TARK+N KF + +LVVTDVAAR
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP LD VIN +FP KAKLFVHRVGR ARAGRSG A SL+++DE G K
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLG-K 386
Query: 122 PV-LADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
P+ A D K + + + + G++P ++ + + + + DM+ +++ NA KY
Sbjct: 387 PINFASD--KSEYKEDETLIGRVPDSIVSLETEFFHSIHDNNEDMQDLRQKATNAMMKYT 444
Query: 181 KSRPGASVESVKKVKELELATMQV----HPLFRNIGSAEQEKFNLLTKMSEYRPPSTVLE 236
++RP S ES ++VK+ ++ T V HP + G +++ ++L K+S+Y+ +T+ E
Sbjct: 445 RTRPPPSAESARRVKQ-DIRTDSVECAPHPFLKADG--DKQSNDILNKISQYKSRNTIFE 501
Query: 237 FGKAR 241
K++
Sbjct: 502 MNKSQ 506
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 450 (163.5 bits), Expect = 9.9e-42, P = 9.9e-42
Identities = 113/260 (43%), Positives = 149/260 (57%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF T++HVE + IL AGIS+ +YS LDP ARKIN AKF K+ VL+VTDVAAR
Sbjct: 284 TVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAAR 343
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIPSLD V+N +FP K KLFVHRVGRCARAGR+G AYS+VS+D+ R
Sbjct: 344 GIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR- 402
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVK 181
P DS G IPQ L+E++ + + ++ + G+ +T NAYKKY+
Sbjct: 403 PFNIHDS---------SALGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYLS 452
Query: 182 SRPGASVES---VKKVKELELATMQ----VHPLFRN--------------IGSAE----Q 216
SRP AS ++ VKK+K L ++ P+ + +AE +
Sbjct: 453 SRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQE 512
Query: 217 EKFNLLTKMSEYRPPSTVLE 236
EK ++L KM +RP TV E
Sbjct: 513 EKHDILVKMRSFRPGGTVFE 532
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 443 (161.0 bits), Expect = 8.4e-41, P = 8.4e-41
Identities = 103/247 (41%), Positives = 142/247 (57%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF ATK+HV+Y++ +L AG + +Y+Y LD TARKI F+TG +LVVTDVAAR
Sbjct: 376 TIVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAAR 435
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR G +YSLV + GRK
Sbjct: 436 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRK 495
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL----DADMEGIQKTCNNAYK 177
VL +S + +D G +P+ D +S+ WV DAD+ + K
Sbjct: 496 LVLGRESDQVNFA-EDVAVGSLPR----DGLSQTCEWVSRVLDDDADIFAQRAVSTKGEK 550
Query: 178 KYVKSRPGASVESVKKVKELELAT--MQVHPLFRNIGS-AEQEKFNLLTKMSEYRPPSTV 234
Y+++R AS ES K+ K++ + VHPLF++ S E E+ +L ++ YRP T+
Sbjct: 551 LYLRTRNAASAESAKRAKQVVTSDNWTAVHPLFQDEASNLEAEREKMLARIGGYRPQETI 610
Query: 235 LEFGKAR 241
E R
Sbjct: 611 FEVQNRR 617
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 408 (148.7 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 98/245 (40%), Positives = 137/245 (55%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV ++L AG S + IY LD AR F+ GK +LVVTDVA+R
Sbjct: 349 TLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASR 408
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP L VINY+FP + K+FVHRVGR ARAGR+G AYSLV +++ R
Sbjct: 409 GIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLNRP 468
Query: 122 PVLADDSMKGKIR---HQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKK 178
V + +K + + G +PQ L+ + + + V D +++ + K
Sbjct: 469 LVTSSKQVKTDSDCDFTKQIVLGSLPQELVAELLEWVQRIVSRDVELQQLSNVAARGEKL 528
Query: 179 YVKSRPGASVESVKKVKEL--ELATMQVHPLFRNIGSAE-QEKF-NLLTKMSEYRPPSTV 234
Y ++R S ES K+ KEL +PLF ++ E +EK+ LL+K+S YRP TV
Sbjct: 529 YFRTRATCSAESAKRAKELVDSKGWSSNNPLFGDVSVIEAEEKYAELLSKVSSYRPSETV 588
Query: 235 LEFGK 239
E G+
Sbjct: 589 FEIGQ 593
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 284 (105.0 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 59/123 (47%), Positives = 77/123 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F T++HVEY+ ++L G +YIY LD ARK F+ G +LVVTDVAAR
Sbjct: 435 TILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP L VINY P +K+FVHRVGR ARAG G AYS+V+ +E G+K
Sbjct: 495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKK 554
Query: 122 PVL 124
+L
Sbjct: 555 ILL 557
Score = 97 (39.2 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 157 NWVELDADMEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQ 216
N + + D++ +KT A K Y ++R AS ES+K+ KE+ + F + E+
Sbjct: 612 NLMSSNFDLQLAKKTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAFFG-KNEEK 670
Query: 217 EKFNLLTKMSEYRPPSTVLEF 237
EK + L K+ R TV EF
Sbjct: 671 EKLDFLAKLQNRRNKETVFEF 691
Score = 37 (18.1 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 122 PVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQ-KTCNNA 175
P +++GK +H+ K+P ++ S+ VE A GI K NNA
Sbjct: 907 PAANGRTVRGKFKHKQMKAPKMPDKHRDNYYSQKKK-VE-KALQSGISVKGYNNA 959
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 320 (117.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 89/252 (35%), Positives = 128/252 (50%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK+HVEYV K+L AG +YIY LD ARK +F+ G VLVVTDVAAR
Sbjct: 397 TIVFVPTKHHVEYVTKLLRDAGYLVSYIYGTLDQHARKNQLYQFRVGLTNVLVVTDVAAR 456
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
GIDIP L VIN+ P +K+F+HRVGR ARAG G AYS+V+ E G+K
Sbjct: 457 GIDIPVLANVINFTLPASSKIFIHRVGRTARAGNKGWAYSIVNEKELPYLLDLELFLGKK 516
Query: 122 PVLADDSMKGKI----RHQDGMF-------------GKIPQGLMEDQISEIMNWVELDAD 164
+L + K+ + G F G +P+ +E N + + +
Sbjct: 517 -ILLTSMHEAKVEMLKKSSTGTFIPPVVNYTERLVLGSVPRVDLETFQELYENLLRNNYE 575
Query: 165 MEGIQKTCNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNIGSAEQEKFNLLTK 224
++ ++ K Y ++R AS ES+K+ KE+ ++ L + E++K L K
Sbjct: 576 IKVLKDVAAKGEKLYHRTRQPASQESLKRSKEIIESSWDDQHLLFG-ENLEKQKDAFLAK 634
Query: 225 MSEYRPPSTVLE 236
+ + TV E
Sbjct: 635 LQDRNSKQTVFE 646
Score = 36 (17.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 218 KFNLLTKMSEYRPPSTVLEFGKARF 242
KF+ K +P STV + RF
Sbjct: 811 KFDEWRKQRNLKPTSTVEDDSNKRF 835
>UNIPROTKB|F1RKB2 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF08147 ProDom:PD024971 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:CU694784 Ensembl:ENSSSCT00000010825 OMA:AHGKCSA
ArrayExpress:F1RKB2 Uniprot:F1RKB2
Length = 716
Score = 309 (113.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 66/172 (38%), Positives = 102/172 (59%)
Query: 71 VINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKPVLA----- 125
VINY+FP K KLF+HRVGR ARAGRSG AYSLV+ DE GR LA
Sbjct: 244 VINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSLTLACPHEE 303
Query: 126 DDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPG 185
+ G +D + G++PQG+++D+ + +E ++ + + +NA ++Y++SRP
Sbjct: 304 PTEVAGAGGGRDCVLGRVPQGVVDDEDCGLRTTLEASLELRSLGRVADNAQQQYMRSRPA 363
Query: 186 ASVESVKKVKELELATMQVHPLFRNIGSAEQ-EKFNLLTKMSEYRPPSTVLE 236
S ES+K+ KEL+LA + +HPLF + E+ ++ L+ + YR +T+ E
Sbjct: 364 PSPESIKRAKELDLAGLGLHPLFSSHFQEEELQQLQLVDSIRNYRSRTTIFE 415
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 243 (90.6 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFTAT+ + + K L L GI S ++ + +R+ +F +GK+RVLV T+VAARG
Sbjct: 248 LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIPSL+ V+N++ P A+ +VHR+GR RAG+SGVA S VS +E G+K
Sbjct: 308 LDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQK 366
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 245 (91.3 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 51/119 (42%), Positives = 73/119 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + E + + L S+T ++ DL+ R + F+ GK +LV TDVAARG
Sbjct: 325 IIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARG 384
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIPS+D V+NY+ P +K ++HRVGR ARAGRSG + SLVS + G+K
Sbjct: 385 LDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK 443
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 232 (86.7 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 53/105 (50%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+SS I+ + AR +F+ GKIRVLV TDVAARG
Sbjct: 260 LVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VIN+ P AK +VHRVGR RA GVA SLVS DE
Sbjct: 320 LDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDE 364
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 232 (86.7 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 53/105 (50%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+SS I+ + AR +F+ GKIRVLV TDVAARG
Sbjct: 260 LVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARG 319
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VIN+ P AK +VHRVGR RA GVA SLVS DE
Sbjct: 320 LDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDE 364
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 221 (82.9 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 50/129 (38%), Positives = 73/129 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+S+ I+ + AR A F+ G++R+LV TD+AARG
Sbjct: 253 LVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILVATDIAARG 312
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI L V+N+ P + +VHR+GR RAGRSG A SLV+ DE +K
Sbjct: 313 LDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQK- 371
Query: 123 VLADDSMKG 131
+AD + G
Sbjct: 372 -IADGDLMG 379
Score = 37 (18.1 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 162 DADMEGIQKTCNNAYKKYVKSRP 184
D D+ G + A K V+ RP
Sbjct: 374 DGDLMGFDASAVEAEKPEVRERP 396
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 230 (86.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K + G+ S I+ D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 250 LVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L VINY P A+ +VHR+GR ARAG SG+A SLVS E
Sbjct: 310 IDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGE 354
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 230 (86.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + K + G+ S I+ D AR+ +F+ GK+R L+ TDVAARG
Sbjct: 250 LVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L VINY P A+ +VHR+GR ARAG SG+A SLVS E
Sbjct: 310 IDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGE 354
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 230 (86.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 46/119 (38%), Positives = 71/119 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T H + + + G ++ ++ L + R + KF++ + +LV TDVAARG
Sbjct: 366 IVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARG 425
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIPS+D VINY+ P +K ++HRVGR ARAGRSG + SL++ + G+K
Sbjct: 426 LDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGKK 484
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 226 (84.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 226 (84.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T+ + + + L L GI + I D AR+ F+ GK+R L+ TDVAARG
Sbjct: 255 LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L+ V+NY+ P KA+ +VHR+GR RAG +G+A SL+S DE
Sbjct: 315 LDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDE 359
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 211 (79.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 45/105 (42%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + K L G+++ I+ + AR A F+ G +++LV TD+AARG
Sbjct: 254 LVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVATDIAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L V+N++ P + +VHR+GR ARAG +G A SLV +DE
Sbjct: 314 IDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADE 358
Score = 37 (18.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 130 KGKIRHQDG 138
KG++ H+DG
Sbjct: 412 KGRVEHKDG 420
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 214 (80.4 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 48/129 (37%), Positives = 72/129 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + + L G+++ I+ + AR A F+ G +R++V TD+AARG
Sbjct: 253 LVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMVATDIAARG 312
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI L V+N+ P + +VHR+GR RAGRSG A SLV+ DE +K
Sbjct: 313 LDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQK- 371
Query: 123 VLADDSMKG 131
+AD + G
Sbjct: 372 -IADGDLMG 379
Score = 39 (18.8 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 162 DADMEGIQKTCNNAYKKYVKSRP 184
D D+ G T A K V+ RP
Sbjct: 374 DGDLMGFDITAVEAEKPEVRERP 396
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 51/106 (48%), Positives = 64/106 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + K L L GI + + D AR +F GK+RVLV TDVAARG
Sbjct: 265 LVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATDVAARG 324
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SDE 107
+DIP L V+N++ P + +VHRVGR RAG+SG A SLVS DE
Sbjct: 325 LDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDE 370
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 51/106 (48%), Positives = 65/106 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++FT TK + V L G + ++ DL AR+ F+TG I VLV TDVAAR
Sbjct: 273 TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAAR 332
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GIDI + VINY P K++VHR+GR RAGR+GVA +LV DE
Sbjct: 333 GIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDE 378
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 202 (76.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 44/119 (36%), Positives = 67/119 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T + + +L G S+ ++ L + R KF++G LV TDVAARG
Sbjct: 289 IIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARG 348
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIP +D VINY+ P +K ++HRVGR ARAGR+G + +LV+ + G+K
Sbjct: 349 LDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKK 407
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 192 KKVKELELATMQVHPLFRNIGSAEQEKFNLLTKMSEYR 229
KK++E E+ V L +G A++E + ++ + R
Sbjct: 406 KKMQEYEIDKEGVFLLSERVGEAQREAIIQMKEIHDRR 443
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 220 (82.5 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 48/105 (45%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ + V K L A I S I+ + + R+ F+ G++ +LV TD+AARG
Sbjct: 254 IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
I + +L VINY+ P + FVHR+GR ARAG SGVA S S DE
Sbjct: 314 IHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDE 358
>UNIPROTKB|I3LIB1 [details] [associations]
symbol:LOC100625841 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00550000074997 EMBL:CU407277
Ensembl:ENSSSCT00000025578 OMA:VIAHYRE Uniprot:I3LIB1
Length = 442
Score = 218 (81.8 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 62/190 (32%), Positives = 98/190 (51%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 113 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 172
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E + P
Sbjct: 173 LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA-KAP 231
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKT---CNNAYKKY 179
V K +I QD + K + +E ++ ++L+A+ + +QK+ N A +
Sbjct: 232 V------KARILPQDVIL-KF-RDKIEKMEKDVYAVLQLEAEEKEMQKSEAQINTAQRLL 283
Query: 180 VKSRPGASVE 189
K + + E
Sbjct: 284 EKGKEAPNPE 293
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 220 (82.5 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 47/104 (45%), Positives = 66/104 (63%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++FT+T + +L G + I D+D R + KF+ G +LV TDVAA
Sbjct: 360 LTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAA 419
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
RG+DIPS+D VINY+ P +K +VHRVGR ARAG SG A ++V+
Sbjct: 420 RGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVT 463
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 218 (81.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + V +L G + ++ L +AR KF++ +LV TDVAARG
Sbjct: 289 IIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARG 348
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIPS+D V N++ P +K ++HRVGR ARAG+SGVA S V+
Sbjct: 349 LDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVT 390
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 217 (81.4 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 48/120 (40%), Positives = 69/120 (57%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+++FT T ++ +L G + I + + R KF+ G+ +LV TDVA+R
Sbjct: 263 SMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASR 322
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIPS+D VINY+ P +K ++HRVGR ARAGRSGV SLV+ E G+K
Sbjct: 323 GLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK 382
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 217 (81.4 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 49/121 (40%), Positives = 68/121 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT T + + ++L G T ++S L + R N A+F+ RVLV TDVA+RG
Sbjct: 354 IVFTNTTKSADLLERLLRSLGHRVTSLHSLLPQSERNSNLARFRASAARVLVATDVASRG 413
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIPS+ V+N+ P +VHRVGR ARAGR+G A +LV + GRK
Sbjct: 414 LDIPSVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTLVGQRDVQLVLAIEERIGRKM 473
Query: 123 V 123
V
Sbjct: 474 V 474
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 220 (82.5 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 47/105 (44%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 467 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 526
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV DE
Sbjct: 527 LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDE 571
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 219 (82.2 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 39/104 (37%), Positives = 69/104 (66%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T+ V+ + ++L +G S I+ + R ++F+ G + +++ TDVA+RG
Sbjct: 633 IVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRG 692
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
+DI + V+NY+FP ++++HR+GR ARAG SGV+YSL+++D
Sbjct: 693 LDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTD 736
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 218 (81.8 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 62/190 (32%), Positives = 98/190 (51%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 436 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E + P
Sbjct: 496 LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA-KAP 554
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKT---CNNAYKKY 179
V K +I QD + K + +E ++ ++L+A+ + +QK+ N A +
Sbjct: 555 V------KARILPQDVIL-KF-RDKIEKMEKDVYAVLQLEAEEKEMQKSEAQINTAQRLL 606
Query: 180 VKSRPGASVE 189
K + + E
Sbjct: 607 EKGKEAPNPE 616
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 217 (81.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 59/193 (30%), Positives = 98/193 (50%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L R +F+ +I +LV TDVAARG
Sbjct: 429 MLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVATDVAARG 488
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E + P
Sbjct: 489 LDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA-KTP 547
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGL--MEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
V K +I QD + K + + +E + ++ + +M+ + N A K+
Sbjct: 548 V------KARILPQDVIL-KFREKIENLEKDVYAVLCLEREEREMQQSEAQINKAKKQLE 600
Query: 181 KSRPGASVESVKK 193
+ + A+ + V++
Sbjct: 601 EGKQEAATKGVER 613
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 217 (81.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 59/193 (30%), Positives = 98/193 (50%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L R +F+ +I +LV TDVAARG
Sbjct: 430 MLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVATDVAARG 489
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E + P
Sbjct: 490 LDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA-KTP 548
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGL--MEDQISEIMNWVELDADMEGIQKTCNNAYKKYV 180
V K +I QD + K + + +E + ++ + +M+ + N A K+
Sbjct: 549 V------KARILPQDVIL-KFREKIENLEKDVYAVLCLEREEREMQQSEAQINKAKKQLE 601
Query: 181 KSRPGASVESVKK 193
+ + A+ + V++
Sbjct: 602 EGKQEAATKGVER 614
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 217 (81.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 46/105 (43%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 433 MLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 492
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E
Sbjct: 493 LDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEE 537
>GENEDB_PFALCIPARUM|MAL8P1.19 [details] [associations]
symbol:MAL8P1.19 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011
EMBL:AL844507 RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2
IntAct:Q8IBA2 MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA
GeneID:2655364 KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
HOGENOM:HOG000282591 Uniprot:Q8IBA2
Length = 1289
Score = 196 (74.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 45/121 (37%), Positives = 65/121 (53%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGK-IRVLVVTDVAA 60
T++F TKYH+ + IL I + +Y + D + R F + I+ L+VTDVA+
Sbjct: 408 TMIFFCTKYHILFFSNILKHFKIHHSILYGNSDTSFRFEQINNFTKNEHIQFLLVTDVAS 467
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RGI+I S+ VINYN P KLF+HR+GR R SG SL++ + G+
Sbjct: 468 RGINITSVQNVINYNLPFSPKLFIHRIGRACRTDISGYGISLLTYQDILYAYEICFFIGK 527
Query: 121 K 121
K
Sbjct: 528 K 528
Score = 51 (23.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 141 GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGAS-------VESVKK 193
G +P + D I I + + D ++ + K+ +YK Y RP S + + K
Sbjct: 658 GCVPH--LNDYIEYIEDLKKRDTELMSLNKSILASYKLYYSMRPKVSKYVSTKCINKINK 715
Query: 194 VKELELATMQVHP 206
+ L ++ HP
Sbjct: 716 IGGLYKLSLYNHP 728
Score = 41 (19.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 174 NAYKKYVKSRPGASVESVKKVKELE 198
N Y+K+VKS + + +K V ELE
Sbjct: 1112 NLYEKWVKS----TKKRIKNVGELE 1132
Score = 38 (18.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 149 EDQISEIMN----WVELDADMEGIQKTC----NNAYKKYVKSRPGASVESVKKVKELE 198
ED+ ++I N W ++ +G + N+ + Y++++ S ++KK+K+ E
Sbjct: 937 EDENADIKNIPEMWKKIFLHSQGNNNSTSMNINDPSEHYMENKKKLSKRALKKLKKNE 994
>UNIPROTKB|Q8IBA2 [details] [associations]
symbol:MAL8P1.19 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011 EMBL:AL844507
RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2 IntAct:Q8IBA2
MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA GeneID:2655364
KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
HOGENOM:HOG000282591 Uniprot:Q8IBA2
Length = 1289
Score = 196 (74.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 45/121 (37%), Positives = 65/121 (53%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGK-IRVLVVTDVAA 60
T++F TKYH+ + IL I + +Y + D + R F + I+ L+VTDVA+
Sbjct: 408 TMIFFCTKYHILFFSNILKHFKIHHSILYGNSDTSFRFEQINNFTKNEHIQFLLVTDVAS 467
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RGI+I S+ VINYN P KLF+HR+GR R SG SL++ + G+
Sbjct: 468 RGINITSVQNVINYNLPFSPKLFIHRIGRACRTDISGYGISLLTYQDILYAYEICFFIGK 527
Query: 121 K 121
K
Sbjct: 528 K 528
Score = 51 (23.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 141 GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKSRPGAS-------VESVKK 193
G +P + D I I + + D ++ + K+ +YK Y RP S + + K
Sbjct: 658 GCVPH--LNDYIEYIEDLKKRDTELMSLNKSILASYKLYYSMRPKVSKYVSTKCINKINK 715
Query: 194 VKELELATMQVHP 206
+ L ++ HP
Sbjct: 716 IGGLYKLSLYNHP 728
Score = 41 (19.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 174 NAYKKYVKSRPGASVESVKKVKELE 198
N Y+K+VKS + + +K V ELE
Sbjct: 1112 NLYEKWVKS----TKKRIKNVGELE 1132
Score = 38 (18.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 149 EDQISEIMN----WVELDADMEGIQKTC----NNAYKKYVKSRPGASVESVKKVKELE 198
ED+ ++I N W ++ +G + N+ + Y++++ S ++KK+K+ E
Sbjct: 937 EDENADIKNIPEMWKKIFLHSQGNNNSTSMNINDPSEHYMENKKKLSKRALKKLKKNE 994
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 46/105 (43%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 436 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E
Sbjct: 496 LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEE 540
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 46/105 (43%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R +F+ +I +LV TDVAARG
Sbjct: 457 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 516
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAGR+G + SLV +E
Sbjct: 517 LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEE 561
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 213 (80.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 47/105 (44%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF+ TK+ + K L A IS+ I+ + AR A F++G++RVLV TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L V+N++ P + +VHR+GR RAG +G A SLVSS+E
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEE 351
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 212 (79.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF Y VE V +L I S ++S LD +R F++GK++VLV TDVA+RG
Sbjct: 249 IVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP + VINY +K ++HRVGR AR GRSG A S ++
Sbjct: 309 LDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFIT 350
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 197 (74.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 40/106 (37%), Positives = 66/106 (62%)
Query: 3 VVFTATKYH-VEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++F T+ VE K L G +S+ ++ D++ AR+ + + GK+ +L+ TDVAAR
Sbjct: 248 IIFVRTRNSCVELAEK-LEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAAR 306
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+D+ + V+NY+ P + +VHR+GR RAGR+G+A V+S E
Sbjct: 307 GLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSRE 352
Score = 40 (19.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 198 ELATMQVHPLFRNIGSAEQEKFNLLTKMSEY 228
E + + P+ ++GSAE K N KM Y
Sbjct: 462 ERRSRESRPMPASLGSAEALKDNPDLKMCRY 492
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 209 (78.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/105 (41%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TKY + + K L A I++ ++S R+ F+ +RVLV TDVAARG
Sbjct: 249 LIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSL-VSSD 106
ID+ ++ VINYN P + ++HR+GR ARAG+SG+A S V +D
Sbjct: 309 IDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVEND 353
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 210 (79.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 44/105 (41%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ATK E + L G S+ ++ D+ AR A + G+IR+LV TDVAARG
Sbjct: 248 IIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + VIN++ P A+ +VHR+GR RAG SG+A S S +E
Sbjct: 308 LDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNE 352
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 214 (80.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 47/106 (44%), Positives = 65/106 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK + + +LGL GI + S L R + +KF+ +I VLV TD+A+R
Sbjct: 396 TIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASR 455
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DI + VIN N P K ++HRVGR ARAG++G + SLV DE
Sbjct: 456 GLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDE 501
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 210 (79.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 53/122 (43%), Positives = 68/122 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +TK E++ + L L GIS+ + D AR F+ GK+RVLV TDVAARG
Sbjct: 245 LVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DI +L VIN P A+ +VHR+GR RAG SG A S VS + G K
Sbjct: 305 LDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEALIGEKL 364
Query: 122 PV 123
PV
Sbjct: 365 PV 366
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 210 (79.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 53/122 (43%), Positives = 68/122 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF +TK E++ + L L GIS+ + D AR F+ GK+RVLV TDVAARG
Sbjct: 245 LVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DI +L VIN P A+ +VHR+GR RAG SG A S VS + G K
Sbjct: 305 LDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEALIGEKL 364
Query: 122 PV 123
PV
Sbjct: 365 PV 366
>UNIPROTKB|Q9KKW0 [details] [associations]
symbol:VCA0990 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 209 (78.6 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K + + + K L AGI +T ++ D + R+ A+F+ G +VL+ TD+ ARG
Sbjct: 262 LVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
I I L VIN+ P A+ +VHRVGR ARAG+ G+A SLV E
Sbjct: 322 IHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGE 366
>TIGR_CMR|VC_A0990 [details] [associations]
symbol:VC_A0990 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 209 (78.6 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K + + + K L AGI +T ++ D + R+ A+F+ G +VL+ TD+ ARG
Sbjct: 262 LVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
I I L VIN+ P A+ +VHRVGR ARAG+ G+A SLV E
Sbjct: 322 IHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGE 366
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 209 (78.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 41/105 (39%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK+ + + + L AG + + +L R+ F+ G ++LV TD+AARG
Sbjct: 243 LIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARG 302
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P A+ ++HR+GR RA RSG A++LV+SD+
Sbjct: 303 IDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDD 347
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 209 (78.6 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I +LV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG++GVA + V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKR 361
Query: 121 K-----PVLADDSMKGKIR 134
K P D++++G+ R
Sbjct: 362 KMERMKPPTLDEALEGQQR 380
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 61/200 (30%), Positives = 96/200 (48%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K + I GL G+S ++ + R + F+ GK+ L+ TD+A+RG
Sbjct: 504 IIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRG 563
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI +D VINY P +++VHRVGR ARAGRSG A +L + + G+
Sbjct: 564 LDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKA-GKAQ 622
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNW-----VELDADMEGIQKTCNNA-Y 176
S D KI + +ED++ +M V ADME ++K N Y
Sbjct: 623 GAKISSRIIDAADADSWQAKIDE--LEDEVEAVMREEKEEKVLAQADME-MRKGENMIRY 679
Query: 177 KKYVKSRPGASVESVKKVKE 196
+ +K+RP + +K K+
Sbjct: 680 EDDIKARPKRTWFETEKDKK 699
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 208 (78.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK+ + L G+++ I+ + AR A F+ G++R+LV TD+AARG
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP L V+N+ P A+ +VHR+GR RAG G A SLVS+ E
Sbjct: 307 IDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIE 351
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 208 (78.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK+ + L G+++ I+ + AR A F+ G++R+LV TD+AARG
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARG 306
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDIP L V+N+ P A+ +VHR+GR RAG G A SLVS+ E
Sbjct: 307 IDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIE 351
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 208 (78.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 47/105 (44%), Positives = 63/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK+ ++ + L GI S I+ + AR A F++G IRVLV TD+AARG
Sbjct: 249 LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L V+NY P + +VHR+GR RA +G A SLV DE
Sbjct: 309 LDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 208 (78.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R + KF+ G I VLV TDVAA
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG++G+A + ++ E R
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKR 362
Query: 121 K------PVLADDSMKGK 132
K P L D++++G+
Sbjct: 363 KMDRMKEPTL-DEALEGQ 379
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 211 (79.3 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK +H +LGL G+ ++ +L T R + +F+ +I +LV TDVAARG
Sbjct: 450 MLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARG 509
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P K +VHRVGR ARAG+ G + SLV E
Sbjct: 510 LDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETE 554
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 207 (77.9 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 45/106 (42%), Positives = 60/106 (56%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T +F TK + V L G S ++ DL+ R +F +LV TDVAAR
Sbjct: 252 TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAAR 311
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DI SLD VINY+ +++ VHR+GR RAG +G+AYSL S E
Sbjct: 312 GLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKE 357
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 207 (77.9 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 45/106 (42%), Positives = 60/106 (56%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T +F TK + V L G S ++ DL+ R +F +LV TDVAAR
Sbjct: 252 TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAAR 311
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DI SLD VINY+ +++ VHR+GR RAG +G+AYSL S E
Sbjct: 312 GLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKE 357
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 210 (79.0 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAA-KFQTGKIRVLVVTDVAAR 61
++FT TK +H +LGL G+ ++ +L T R + A +F+ +I +LV TDVAAR
Sbjct: 465 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRXLEALWRFKDEQIDILVATDVAAR 524
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
G+DI + VIN+ P K +VHRVGR ARAGR+G + SL+
Sbjct: 525 GLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLL 566
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 208 (78.3 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF A K + +LGL G+ + ++ L R N F++ ++ VL+ TD+AARG
Sbjct: 377 VVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARG 436
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP ++ VINY+ P ++++HRVGR ARAGR G + + V K
Sbjct: 437 LDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFVGESSQERAIVKSAIVNGKG 496
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQKTCNNA-YKKYV 180
V ++ K + + + ++++ + E EL A+ME + K N +++ +
Sbjct: 497 VAK--TVDWKQAEETNKLLESKESVIDEVLEEEKEAKELLRAEME-LTKASNLIKHEQEI 553
Query: 181 KSRP 184
SRP
Sbjct: 554 HSRP 557
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 208 (78.3 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF A K + +LGL G+ + ++ L R N F++ ++ VL+ TD+AARG
Sbjct: 377 VVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARG 436
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP ++ VINY+ P ++++HRVGR ARAGR G + + V K
Sbjct: 437 LDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFVGESSQERAIVKSAIVNGKG 496
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVEL-DADMEGIQKTCNNA-YKKYV 180
V ++ K + + + ++++ + E EL A+ME + K N +++ +
Sbjct: 497 VAK--TVDWKQAEETNKLLESKESVIDEVLEEEKEAKELLRAEME-LTKASNLIKHEQEI 553
Query: 181 KSRP 184
SRP
Sbjct: 554 HSRP 557
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 206 (77.6 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R + KF+ G I VLV TDVAA
Sbjct: 243 LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG++G+A + ++ E R
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKR 362
Query: 121 K------PVLADDSMKGK 132
K P L D++++G+
Sbjct: 363 KMDRMKAPTL-DEAIEGQ 379
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 209 (78.6 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK +H +LGL G+ + ++ +L R + KF+ +I VL+ TDVAARG
Sbjct: 407 MVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARG 466
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VIN+ P + ++HRVGR ARAGR+G++ SL E
Sbjct: 467 LDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKE 511
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 204 (76.9 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK V+ V + L G ++ ++ D+ R F+ GK +LV TDVAARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP + VIN++ P + ++HR+GR RAGR G A +L++ E ++
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKR- 361
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLME 149
L + + + ++ F KI + +++
Sbjct: 362 -LKREILPEPVDLEEARFKKIAKKILD 387
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 204 (76.9 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK V+ V + L G ++ ++ D+ R F+ GK +LV TDVAARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP + VIN++ P + ++HR+GR RAGR G A +L++ E ++
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKR- 361
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLME 149
L + + + ++ F KI + +++
Sbjct: 362 -LKREILPEPVDLEEARFKKIAKKILD 387
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 205 (77.2 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF AT + +L G+ + ++ + R + KF++ +LV TDVAARG
Sbjct: 287 IVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARG 346
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIP +D VINY+ P ++K +VHRVGR ARAGRSG+A ++V+ + G+K
Sbjct: 347 LDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKK 405
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 204 (76.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 41/102 (40%), Positives = 66/102 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R N AKF++ ++L+ TDVAARG
Sbjct: 252 IIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR+GV+ +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVT 353
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ +VF TK V+ + + L L G ++ I+ DL R KF+ G I VLV TDVAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DI + V N++ P + +VHR+GR RAG+ G+A V+ E R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 121 K------PVLADDSMKGKIR 134
K P L D++++G+ R
Sbjct: 362 KMDRMDAPTL-DEALEGQQR 380
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 202 (76.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 39/102 (38%), Positives = 66/102 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + ++ +L S ++S + R AKF++ ++L+ TDVAARG
Sbjct: 252 IIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR+G++ ++V+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVT 353
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/107 (38%), Positives = 68/107 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINA-AKFQTGKIRVLVVTDVAA 60
++VF T+ + + L A I +I ++ P R+ NA ++F+ G + +L+ TDVAA
Sbjct: 249 SIVFLKTRERLADLRAELEKAQIPCAWIQGEM-PQDRRNNAISRFREGDVNILLATDVAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGID+P + VIN++ P A +++HR+GR RAG+ G+A SLV + +
Sbjct: 308 RGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHD 354
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/107 (38%), Positives = 68/107 (63%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINA-AKFQTGKIRVLVVTDVAA 60
++VF T+ + + L A I +I ++ P R+ NA ++F+ G + +L+ TDVAA
Sbjct: 249 SIVFLKTRERLADLRAELEKAQIPCAWIQGEM-PQDRRNNAISRFREGDVNILLATDVAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
RGID+P + VIN++ P A +++HR+GR RAG+ G+A SLV + +
Sbjct: 308 RGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHD 354
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/105 (36%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + +++ K L L G+ + I+ D R+ +F+TGK +++ TDVA+RG
Sbjct: 364 IVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRG 423
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI ++ VIN++FP + + +VHR+GR RAG G +++ +++D+
Sbjct: 424 LDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADK 468
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/105 (36%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + +++ K L L G+ + I+ D R+ +F+TGK +++ TDVA+RG
Sbjct: 364 IVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRG 423
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI ++ VIN++FP + + +VHR+GR RAG G +++ +++D+
Sbjct: 424 LDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADK 468
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F E + ++L ++S++ + R + +F+ G R+L+ TDVA+RG
Sbjct: 257 VIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRG 316
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DIP+++ VIN++ P F+HRVGR ARAGR G A S++ + +K
Sbjct: 317 LDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERINKKM 376
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAYKKYVKS 182
L +D + D + I + L +++ + +E+D + G +K N K
Sbjct: 377 ELLEDV------NDDNV---IKESLSATSVAKRESLMEMDKENFGERKKINRKKHGLDKV 427
Query: 183 RPGASVESVKKVKE 196
+P V KK K+
Sbjct: 428 KP-ERVTKPKKSKK 440
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 202 (76.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + + + + K L AGI++ ++ + D T R A F+ +I+VLV TD+ ARG
Sbjct: 274 LVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
I + +L VIN + P A ++VHR+GR ARAG G+A SLV E
Sbjct: 334 IHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGE 378
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 202 (76.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + + + + K L AGI++ ++ + D T R A F+ +I+VLV TD+ ARG
Sbjct: 274 LVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARG 333
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
I + +L VIN + P A ++VHR+GR ARAG G+A SLV E
Sbjct: 334 IHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGE 378
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 202 (76.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 45/105 (42%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF TK + V L G S+ ++ DL+ R +F G RVLV TDVAARG
Sbjct: 245 VVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARG 304
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI SL+ V+N+ ++ VHR+GR ARAG SG+A S + +E
Sbjct: 305 LDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 204 (76.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R+ + F+ GK VLV TDVA++G
Sbjct: 401 LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKG 460
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D P + VINY+ P + + +VHR+GR R G++G+A + ++ ++
Sbjct: 461 LDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 505
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 202 (76.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 44/106 (41%), Positives = 64/106 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ V K L G + I+ DLD + R F+ GK+R+LV +DVAARG
Sbjct: 256 IIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGKLRLLVASDVAARG 315
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSL-VSSDE 107
+D+PS+ V N++ P + +VHR+GR RAGR G A +L + DE
Sbjct: 316 LDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDE 361
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 202 (76.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 39/102 (38%), Positives = 66/102 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + ++ +L S ++S + R AKF++ ++L+ TDVAARG
Sbjct: 255 IIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR+G++ ++V+
Sbjct: 315 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVT 356
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 200 (75.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 277 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 337 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 381
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 282 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 341
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 342 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 386
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 284 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 343
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 344 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 388
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 205 (77.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 65/218 (29%), Positives = 110/218 (50%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +K V + I GL+ + + ++ +L R + +F+ G++ L+ +DVA+R
Sbjct: 439 TIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASR 498
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DI + VINYN P ++HRVGR ARAG G + S ++ ++ K
Sbjct: 499 GLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLL---------K 549
Query: 122 PVLADDSMKGKIRH--QDGM-F--GKIPQGLMEDQISEIMNWVELDADMEGIQKTCNNAY 176
++ K K R QD + F +I + L ED I I+ +AD+ +KT + A
Sbjct: 550 DIVTKARNKAKSRSVSQDNVNFWRNRIEE-LTED-IKSIVREEMKEADLRKAEKTLDKAE 607
Query: 177 KKYVKSRPGASVESVK---KVKELELATMQVHPLFRNI 211
K + S A+VE+ K K K+ E + ++ + NI
Sbjct: 608 K--IISNADANVETPKVWYKTKQEEDKSKELWKIENNI 643
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 199 (75.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 40/105 (38%), Positives = 63/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+Y+ + + + + ++ D+ R +F++G RVL+ TDV ARG
Sbjct: 278 VIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARG 337
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P +L++HR+GR R GR GVA + V SD+
Sbjct: 338 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 382
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 199 (75.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 41/105 (39%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK V+ + L G+++ + DL AR+ +F+ G ++VLV TDVAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VIN+ P A+ ++HR+GR RAG +G+A +L S ++
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQED 353
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 199 (75.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 41/105 (39%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK V+ + L G+++ + DL AR+ +F+ G ++VLV TDVAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VIN+ P A+ ++HR+GR RAG +G+A +L S ++
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQED 353
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 203 (76.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 37/105 (35%), Positives = 69/105 (65%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F + K +++ LG+ IS ++ + + + R+ F+TGK+R+L+ TD+A+RG
Sbjct: 490 IIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASRG 549
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V NY+FP + +VHRVGR RAGR+GV+ +L++ ++
Sbjct: 550 LDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRND 594
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 200 (75.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 43/106 (40%), Positives = 62/106 (58%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VVF TK V+ V L +G S ++ D++ R +F I +LV TDVAAR
Sbjct: 246 SVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAAR 305
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+D+ +LDAV NY+ ++ VHR+GR RAG G+A+S S +E
Sbjct: 306 GLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNE 351
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 199 (75.1 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K+H E++ + L GI++ + D + R F+ G I VL+ TD+AARG
Sbjct: 259 LIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATDIAARG 318
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L VIN+N P ++HR+GR RAG G+A SL+ ++
Sbjct: 319 LDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDHED 363
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 198 (74.8 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 40/105 (38%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R +F+ G+ RVL+ TDV ARG
Sbjct: 269 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARG 328
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P +L++HR+GR R GR GVA + V SD+
Sbjct: 329 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 373
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 200 (75.5 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 42/120 (35%), Positives = 76/120 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINA-AKFQTGKIRVLVVTDVAAR 61
++F +T + + +L + + ++S L+ + +++A +KF++GK+ +L+ TDVA+R
Sbjct: 306 MIFVSTCRTCQRLSLMLDELEVENIAMHS-LNSQSMRLSALSKFKSGKVPILLATDVASR 364
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
G+DIP++D VINY+ P + +VHRVGR ARAGR G+A S+++ + G+K
Sbjct: 365 GLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKK 424
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 199 (75.1 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 3 VVFTATKYHVE-YVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VF KY + + H + + S ++S D R+ F+ +IR+L+ TDVAAR
Sbjct: 364 IVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAAR 423
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSS 105
G+DIPS+ AV NY P + +VHR+GR RAG++G A+S V++
Sbjct: 424 GLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVTT 467
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 195 (73.7 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 37/105 (35%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ L + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 266 VIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V++D+
Sbjct: 326 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADD 370
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 196 (74.1 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++VF + V + L AGI++ Y+ ++ R + G++ VLV TDVAAR
Sbjct: 251 SIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAAR 310
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GIDIP + V N++ P ++HR+GR ARAGR G A SLV + +
Sbjct: 311 GIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHD 356
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 200 (75.5 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 42/106 (39%), Positives = 61/106 (57%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +K + I GL +++T I+ L R F+ GK L+ TDVA+R
Sbjct: 507 TIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASR 566
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GIDI ++ VINY P ++++HRVGR ARAGRSG A +L +
Sbjct: 567 GIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGD 612
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 199 (75.1 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 39/105 (37%), Positives = 68/105 (64%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F + K +++ LG+ IS ++ + + R+ F+TGK+R+L+ TD+A+RG
Sbjct: 493 IIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILIATDLASRG 552
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS-SD 106
+D+ + V NY+FP + +VHRVGR RAGR+GV+ +L++ SD
Sbjct: 553 LDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSD 597
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 200 (75.5 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 54/147 (36%), Positives = 76/147 (51%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + K V+ + L L ++ D D +R KF++G VL+ TDVAARG
Sbjct: 477 LVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARG 536
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAG-RSGVAYSLVSSDEXXXXXX---XXXXX 118
+DI SL V+NY+ + VHR+GR RAG R GVAY+LV+ E
Sbjct: 537 LDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAA 596
Query: 119 GRK--PVLADDSMK-GKIRHQ-DGMFG 141
G+ P L D +MK G+ + + DG G
Sbjct: 597 GQNVPPELTDLAMKDGRFKSKRDGRKG 623
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 197 (74.4 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 37/105 (35%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R + F+ GK VLV TDVA++G
Sbjct: 352 LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKG 411
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D P + VINY+ P + + +VHR+GR R G++G+A + ++ ++
Sbjct: 412 LDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQ 456
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 190 (71.9 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 182 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 241
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 242 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 286
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 190 (71.9 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 182 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 241
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 242 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 286
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 197 (74.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 38/105 (36%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + K + + L + GI ++ D + + R F+TG++++L+ TD+AARG
Sbjct: 450 IVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARG 509
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V NYNFP + +VHRVGR RAG+ G + +LV+ D+
Sbjct: 510 LDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKIGESITLVTQDD 554
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 196 (74.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V+ V L G + I+ DL + R +F+ GK+++LV +DVAARG
Sbjct: 252 IVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVASDVAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP + V N+ P K + +VHR+GR RAGR+G +Y++V+
Sbjct: 312 LDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVT 353
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 194 (73.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 36/105 (34%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 299 VIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARG 358
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ D+
Sbjct: 359 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDD 403
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 197 (74.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + K + + L + GI ++ D + + R+ F+TGK+++L+ TD+A+RG
Sbjct: 464 IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRG 523
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V NYNFP + +VHRVGR RAG+ G + +L++ D+
Sbjct: 524 LDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDD 568
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 197 (74.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + K + + L + GI ++ D + + R+ F+TGK+++L+ TD+A+RG
Sbjct: 473 IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRG 532
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V NYNFP + +VHRVGR RAG+ G + +L++ D+
Sbjct: 533 LDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDD 577
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 197 (74.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 40/99 (40%), Positives = 60/99 (60%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF TK + + L + G +T I+ D R++ F+TG+ +LV TDVAA
Sbjct: 407 LTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAA 466
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVA 99
RG+DIP + V+N++ P +VHR+GR RAG SG+A
Sbjct: 467 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLA 505
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF A K + I+GL G+S ++ L R + KF+ ++ VL+ TD+A+RG
Sbjct: 483 VVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRG 542
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
+DIP ++ VINY+ P ++++HRVGR ARAGR G + + V
Sbjct: 543 LDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 583
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 193 (73.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
TVVF + V+Y+ L + ++ + R +F+ G+++VLV TDVAAR
Sbjct: 260 TVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAAR 319
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DI + VIN++ P K +++HR+GR RAG+ G A SLV + +
Sbjct: 320 GLDIDDISHVINFDMPRKVDIYIHRIGRTGRAGKKGTAISLVEAHD 365
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/105 (34%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ L + + ++ D++ R + +F++G RVL+ TD+ ARG
Sbjct: 268 VIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARG 327
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V++D+
Sbjct: 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADD 372
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 38/105 (36%), Positives = 63/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + A + + ++ D++ R +F+ G RVL+ TDV ARG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + VINY+ P +L++HR+GR R GR GVA + V D+
Sbjct: 329 LDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDD 373
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 38/105 (36%), Positives = 63/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + A + + ++ D++ R +F+ G RVL+ TDV ARG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P + VINY+ P +L++HR+GR R GR GVA + V D+
Sbjct: 329 LDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDD 373
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 34/106 (32%), Positives = 66/106 (62%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+V+F T+ V+ + + + + + + ++ D++ R++ +F++G RVL+ TD+ AR
Sbjct: 272 SVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLAR 331
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VINY+ P + ++HR+GR R GR GVA + ++ D+
Sbjct: 332 GIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDD 377
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F TK V+++ + + A + + ++ D+ R+ +F++G RVL+ TDV ARG
Sbjct: 276 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + +INY+ P +L++HR+GR R GR GVA + V +D+
Sbjct: 336 LDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 380
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 191 (72.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 36/105 (34%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + L + + ++ D+D R +F+TG R+L+ TD+ ARG
Sbjct: 262 VIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GV+ + V++D+
Sbjct: 322 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDD 366
>TIGR_CMR|BA_4509 [details] [associations]
symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
ProteinModelPortal:Q81LV0 SMR:Q81LV0
EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
Length = 436
Score = 192 (72.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 44/102 (43%), Positives = 58/102 (56%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ VVFT TK + V L G+ I+ DL P RK + + + + +V TD+AA
Sbjct: 248 LAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVATDLAA 307
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSL 102
RGIDI + VINY P FVHRVGR ARAG SG+A ++
Sbjct: 308 RGIDIEGISHVINYELPSDLDFFVHRVGRTARAGHSGIAVTI 349
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 191 (72.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 271 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 330
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 331 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 375
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 194 (73.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/105 (40%), Positives = 58/105 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK E + + L G S+ I D+ R+ + G I +LV TDVAARG
Sbjct: 254 IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V+NY+ P + +VHR+GR RAGRSG A VS E
Sbjct: 314 LDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRE 358
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 380
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 34/105 (32%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D++ R + +F++G RVL+ TD+ ARG
Sbjct: 276 VIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARG 335
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++++ D+
Sbjct: 336 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDD 380
>DICTYBASE|DDB_G0269966 [details] [associations]
symbol:ddx1 "SPla/RYanodine receptor SPRY
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA;ISS] [GO:0033677 "DNA/RNA helicase activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=IEA;ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0269966 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003682
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0004518 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143
GO:GO:0033677 KO:K13177 OMA:TLNNVKQ RefSeq:XP_646435.1
ProteinModelPortal:Q55CP6 STRING:Q55CP6 EnsemblProtists:DDB0233650
GeneID:8617394 KEGG:ddi:DDB_G0269966 ProtClustDB:CLSZ2431424
Uniprot:Q55CP6
Length = 765
Score = 196 (74.1 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/220 (29%), Positives = 99/220 (45%)
Query: 3 VVFTATKYHVEYVHKIL---------GLAG-ISSTYIYS-DLDPTARKINAAKFQTGKIR 51
++F T+ +++H+ L GL G SST ++ D ARK N KF+ G +R
Sbjct: 538 IIFARTRLDCDHIHQFLKDAGGGNTSGLEGEFSSTVLHGGDNISRARKDNLEKFRNGDVR 597
Query: 52 VLVVTDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXX 111
L+ TDVAARGIDI L +INY P + ++HRVGR R+ R G+A SLV+ ++
Sbjct: 598 FLICTDVAARGIDIRGLPYMINYTLPESFEDYIHRVGRVGRSDRIGLAISLVAYEQEKVW 657
Query: 112 XXXXXXXGRKPVLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELDADMEGIQKT 171
G+ K+ G + + I E + +ELD+D + + K
Sbjct: 658 YHTCRDKGK------GCHNTKLTENGGCCIWYDEPQLFTAIQENIGPIELDSDFQ-LPKD 710
Query: 172 CNNAYKKYVKSRPGASVESVKKVKELELATMQVHPLFRNI 211
GAS + +EL +Q+ L I
Sbjct: 711 MKQLNFGGSTKLTGASADYKPHTEELRSRVLQLSQLEETI 750
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 36/105 (34%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R I +F++G RVL+ TD+ ARG
Sbjct: 281 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARG 340
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 341 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 385
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 39/104 (37%), Positives = 61/104 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK VE + +I+ G ++T I+ D R F+ GK +L+ TDVA+RG
Sbjct: 495 IVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRG 554
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
+D+ L VINY++P ++ +VHR+GR R + G AY+ + D
Sbjct: 555 LDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD 598
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 191 (72.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 35/105 (33%), Positives = 65/105 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 293 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 352
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA ++V+ ++
Sbjct: 353 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEED 397
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 287 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKG 346
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ V+NY+ P + + +VHR+GR R+G++G+A + ++
Sbjct: 347 LDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFIN 388
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 194 (73.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + L + ++ D+ + R+ A F+ G +LV TDVAARG
Sbjct: 353 IVFTQTKRDADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARG 411
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+P++D +I+Y P + FVHR GR RAG+ G A + S D+
Sbjct: 412 LDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQ 456
>UNIPROTKB|F1N0P2 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:DAAA02019036 IPI:IPI00709252
UniGene:Bt.61505 Ensembl:ENSBTAT00000056136 OMA:PLEPKEY
Uniprot:F1N0P2
Length = 392
Score = 190 (71.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R AKF++ R+L+ TDVA+RG
Sbjct: 161 IIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRG 220
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 221 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 262
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 193 (73.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K + ++ L I + I+SDL P R+ +F+ G+ VL+ TDV ARG
Sbjct: 384 LIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARG 443
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D ++ VINY+FP A ++HR+GR RAGRSG A + + +
Sbjct: 444 MDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQD 488
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 337 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 381
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 192 (72.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/101 (34%), Positives = 64/101 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +K +++ + GI+S ++ + R+++ ++G++++LV TD+A+RG
Sbjct: 342 IIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRG 401
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
ID+P + V+NY+FP + +VHRVGR RAGR G A S +
Sbjct: 402 IDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFL 442
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 35/105 (33%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + + + + ++ D+D R + +F++G RVL+ TD+ ARG
Sbjct: 278 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 337
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 338 IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEED 382
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 194 (73.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF TK + + + K L AG T ++ R+I+ F+ + VLV TDV RG
Sbjct: 580 IVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRG 639
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
IDIP + VINY+ P +++ HR+GR RAG+SGVA S ++
Sbjct: 640 IDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLT 681
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 193 (73.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 39/99 (39%), Positives = 61/99 (61%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF TK + + L + G +T I+ D R++ F++G+ +LV TDVAA
Sbjct: 420 LTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAA 479
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVA 99
RG+DIP + V+N++ P +VHR+GR RAG+SG+A
Sbjct: 480 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 518
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 194 (73.4 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VFT TK + V L + I++ ++ D+ R+ F+ GK VLV TDVA+R
Sbjct: 354 TIVFTQTKRDADEVSLALSNS-IATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASR 412
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DIP++D VI+Y P + FVHR GR RAG+ G A + +S +
Sbjct: 413 GLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQ 458
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 193 (73.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 44/138 (31%), Positives = 75/138 (54%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K + + LG+ G+ ++ D + R+ F+ GK+R+LV TD+A+RG
Sbjct: 488 IIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRG 547
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR-K 121
+D+ + V N++FP + +VHRVGR RAGR+G A +L++ + R K
Sbjct: 548 LDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKKDWKAASELIDILQRAK 607
Query: 122 PVLADD--SMKGKIR-HQ 136
V+ D+ SM + + HQ
Sbjct: 608 QVVPDELISMAERYKQHQ 625
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 190 (71.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 39/102 (38%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F E ++ IL L + T ++S++ R + +F+ ++LV TDVA+RG
Sbjct: 262 IIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRG 321
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIPS+ VIN++ P ++HRVGR ARAGRSG + S+V+
Sbjct: 322 LDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVT 363
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 43/105 (40%), Positives = 57/105 (54%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK + V L + G ++ I+ DLD R +F VLV TDVAARG
Sbjct: 246 LIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI L AVINY ++ HR+GR RAG G+A SLV+ E
Sbjct: 306 LDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRE 350
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 45/105 (42%), Positives = 58/105 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V F TK V+ L GIS+ ++ DL+ R A F VLV TDVAARG
Sbjct: 248 VAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARG 307
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI +LD VIN +++ +HRVGR RAG G+A SLV+ E
Sbjct: 308 LDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSE 352
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 191 (72.3 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/105 (38%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V + L G + I+ DL R +F++GK +L+ TDVAARG
Sbjct: 363 LIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARG 422
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DIP++ VIN FP + +VHR+GR RAG++G A++L + E
Sbjct: 423 LDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQE 467
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 192 (72.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 39/99 (39%), Positives = 60/99 (60%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VF TK + + L + +T I+ D R++ F+TG+ +LV TDVAA
Sbjct: 410 LTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAA 469
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVA 99
RG+DIP + V+N++ P +VHR+GR RAG+SG+A
Sbjct: 470 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIA 508
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 189 (71.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 40/105 (38%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F + K ++ + L GIS+ + D AR F+ G+I VL+ TD+AARG
Sbjct: 257 LIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARG 316
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L VIN++ P ++HR+GR RAG +G+A +L+S +E
Sbjct: 317 IDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEE 361
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 189 (71.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 40/105 (38%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F + K ++ + L GIS+ + D AR F+ G+I VL+ TD+AARG
Sbjct: 257 LIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARG 316
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI L VIN++ P ++HR+GR RAG +G+A +L+S +E
Sbjct: 317 IDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEE 361
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 191 (72.3 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K E + + L G + I+ + + R + + F+ G +LV TDVAARG
Sbjct: 370 LVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARG 429
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYS 101
+DIP ++ VINY FP + +VHR+GR RAG+ GVA++
Sbjct: 430 LDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHT 468
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 190 (71.9 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R AKF++ R+L+ TDVA+RG
Sbjct: 252 IIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 190 (71.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R AKF++ R+L+ TDVA+RG
Sbjct: 252 IIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 190 (71.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R AKF++ R+L+ TDVA+RG
Sbjct: 252 IIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 190 (71.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R AKF++ R+L+ TDVA+RG
Sbjct: 252 IIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 189 (71.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+ VVF + + LG+ G+ ++ D + R+ F+ GK+R+LV TD+A+
Sbjct: 299 VVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLAS 358
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+D+ + V N++FP + +VHRVGR RAGR+G A +L++ + R
Sbjct: 359 RGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKKDWKAASELIDILQR 418
Query: 121 -KPVLADD--SMKGKIR-HQ 136
K V+ D+ SM + + HQ
Sbjct: 419 AKQVVPDELISMAERYKQHQ 438
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 192 (72.6 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 49/146 (33%), Positives = 73/146 (50%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T+VFT TK + + L G +T I+ D R+ A F+ G +LV T VAA
Sbjct: 445 LTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAA 504
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGR 120
RG+DIP++ VINY+ P +VHR+GR RAG G+A + + +
Sbjct: 505 RGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSE 564
Query: 121 KPVLADDSMKGKIRHQDGMFGKIPQG 146
D + KI ++G FGK+ +G
Sbjct: 565 ANQEVPDFLT-KIA-REGAFGKMTRG 588
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 193 (73.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 59/203 (29%), Positives = 99/203 (48%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F+ TK + + GLAG+ + ++ +L R + F+ ++ L+ TDVAARG
Sbjct: 416 IIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARG 475
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI + VINY P + +VHRVGR ARAGR G A + V+ + G K
Sbjct: 476 LDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSK- 534
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGL--MEDQISEIMNWVELD------ADMEGIQKTCNN 174
+K ++ + + K Q + MEDQ S +++ E D A+ME +
Sbjct: 535 ------LKSRVIPEQSIV-KWSQIIDEMEDQYSAVIS-AERDERALRKAEMEFAKAENML 586
Query: 175 AYKKYVKSRPGASVESVKKVKEL 197
++ + +RP + +K K+L
Sbjct: 587 EHRDEIYARPKRTWFMTEKEKKL 609
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T+ V + L AGI ++ D++ R ++F G++ VL+ TDVAARG
Sbjct: 249 IVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI + VIN++ P A ++HR+GR RAG G A SL + +
Sbjct: 309 IDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHD 353
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T+ V + L AGI ++ D++ R ++F G++ VL+ TDVAARG
Sbjct: 249 IVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
IDI + VIN++ P A ++HR+GR RAG G A SL + +
Sbjct: 309 IDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHD 353
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 194 (73.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 39/102 (38%), Positives = 60/102 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +TK VE + L G + ++ D + R F+ GKI +L+ TDVAARG
Sbjct: 554 LIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARG 613
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP + V+NY+ + HR+GR RAG +GVAY+L++
Sbjct: 614 LDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLIT 655
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 191 (72.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 432 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKG 491
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 492 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 533
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 192 (72.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 38/105 (36%), Positives = 64/105 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K + + L L GI+ ++ D + R+ F+ G++R+LV TD+A+RG
Sbjct: 527 LIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRG 586
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V NY+FP + +VHRVGR RAGRSG + +LV+ ++
Sbjct: 587 LDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTRED 631
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 435 LIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 494
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 495 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 536
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 537
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 537
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 537
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 537
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 537
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 189 (71.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 39/102 (38%), Positives = 63/102 (61%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT T + + +L + ++S + R A+F++ R+L+ TDVA+RG
Sbjct: 252 IIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP++ VIN+N P K+++HRVGR ARAGR G A +LV+
Sbjct: 312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 190 (71.9 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 40/104 (38%), Positives = 60/104 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + + + L G + I+ D R +F+TGK ++V TDVA+RG
Sbjct: 373 LIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRG 432
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
ID+ + V NY+FP + +VHR+GR RAG G AY+ +SD
Sbjct: 433 IDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSD 476
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 191 (72.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 454 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 513
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 514 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 555
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 182 (69.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 40/106 (37%), Positives = 58/106 (54%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK +++ L IS+T I+ D + R+ F+ GK VLV T VAAR
Sbjct: 110 TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAAR 169
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+DI ++ VIN++ P +VHR+GR R G +G A S +
Sbjct: 170 GLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDESD 215
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 191 (72.3 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R F+ GK VLV TDVA++G
Sbjct: 463 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 522
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + + +VHR+GR R+G +G+A + ++
Sbjct: 523 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFIN 564
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 187 (70.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 43/104 (41%), Positives = 60/104 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK+ + L GI + I+S R+ F++GKI+ LV T +AARG
Sbjct: 252 LIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATAIAARG 311
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
+DI L VINY+ P + ++HR+GR RAG SG A SLVS D
Sbjct: 312 LDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKD 355
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 189 (71.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 38/100 (38%), Positives = 63/100 (63%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FT TK + + + L I + ++ + R ++F++ +IR L+ TDVAARG
Sbjct: 255 MIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARG 314
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSL 102
+DIPS++ V+N+ P K ++HRVGR ARAGR G++ S+
Sbjct: 315 LDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISI 354
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 190 (71.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 41/106 (38%), Positives = 59/106 (55%)
Query: 3 VVFTATKYHVEYVHKILGLA-GISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+VFT TK + + GLA ++ D+ R+ A F+ G +LV TDVAAR
Sbjct: 365 IVFTQTKRDADRL--AFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
G+D+P++D VI+Y P + FVHR GR RAG+ G A + D+
Sbjct: 423 GLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQ 468
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 186 (70.5 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ VE + L + + IYSDL R +F++G R+L+ TD+ ARG
Sbjct: 264 VIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARG 323
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V++++
Sbjct: 324 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNED 368
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 186 (70.5 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ VE + L + + IYSDL R +F++G R+L+ TD+ ARG
Sbjct: 264 VIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARG 323
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V++++
Sbjct: 324 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNED 368
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 186 (70.5 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++++ T+ V+ + + + + + ++ D+D R + +F++G RVLV TD+ AR
Sbjct: 265 SIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLAR 324
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VINY+ P ++HR+GR R GR GVA + V++D+
Sbjct: 325 GIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDD 370
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 186 (70.5 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
++++ T+ V+ + + + + + ++ D+D R + +F++G RVLV TD+ AR
Sbjct: 265 SIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLAR 324
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VINY+ P ++HR+GR R GR GVA + V++D+
Sbjct: 325 GIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDD 370
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 190 (71.9 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 36/105 (34%), Positives = 66/105 (62%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF + K +++ L L IS ++ D + R+ F+TGK+R+L+ TD+A+RG
Sbjct: 491 IVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRG 550
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V N++FP + +VHR+GR RAGR+GV+ + ++ ++
Sbjct: 551 LDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRND 595
>UNIPROTKB|E1BUI4 [details] [associations]
symbol:DDX51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 OMA:HIDQTPG GeneTree:ENSGT00550000075141
EMBL:AADN02043240 IPI:IPI00601309 Ensembl:ENSGALT00000010245
Uniprot:E1BUI4
Length = 676
Score = 190 (71.9 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 42/116 (36%), Positives = 65/116 (56%)
Query: 18 ILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFP 77
+ GI+ S L P R+ +F+ GKI++L+ TD ARGIDI ++ VINY+ P
Sbjct: 534 VQAFGGITVAEFSSRLPPNERQRTMKEFEQGKIQLLISTDATARGIDIKGVNCVINYDTP 593
Query: 78 CKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKPVLADDSMKGKI 133
+ ++HRVGR ARAG++G+A+S+V + G P + +KGK+
Sbjct: 594 QFIRTYIHRVGRTARAGKAGLAFSMVLRIQERRFLRMLKDAGI-PDIKQHLVKGKL 648
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 186 (70.5 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+V+F T+ V+++ + + + + D+D R I +F++G RVL+ TD+ AR
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VIN++ P + + ++HR+GR R GR GVA + V+ D+
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 188 (71.2 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 39/105 (37%), Positives = 58/105 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K + L S I+ DL R + F++G+ +L+ TDVAARG
Sbjct: 404 LIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARG 463
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DIP++ VIN FP + +VHR+GR RAG G A++L + DE
Sbjct: 464 LDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDE 508
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 186 (70.5 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 38/101 (37%), Positives = 61/101 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ + + + L + + + +L+ T R +F+ ++LV TDVA+RG
Sbjct: 254 IIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVTTDVASRG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
+DIP++ VIN++ P + +VHRVGR RAG G A SLV
Sbjct: 314 LDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLV 354
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 186 (70.5 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 38/101 (37%), Positives = 61/101 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ + + + L + + + +L+ T R +F+ ++LV TDVA+RG
Sbjct: 254 IIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVTTDVASRG 313
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
+DIP++ VIN++ P + +VHRVGR RAG G A SLV
Sbjct: 314 LDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLV 354
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 187 (70.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 42/119 (35%), Positives = 67/119 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF T + + V +L GI++ ++ + R KF++ VL+ TDVA+RG
Sbjct: 322 MVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRG 381
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIP +D VIN++ P +K ++HRVGR ARAGRSG + + V+ + G+K
Sbjct: 382 LDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEALIGKK 440
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 185 (70.2 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+V+F T+ V+++ + + + + D+D R I +F++G RVL+ TD+ AR
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VIN++ P + + ++HR+GR R GR GVA + V+ D+
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDD 386
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 190 (71.9 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 36/101 (35%), Positives = 60/101 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK V+ + + + G + I+ D R + F+ G+ +LV TDVAAR
Sbjct: 407 TIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAAR 466
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSL 102
G+D+ + VINY++P ++ +VHR+GR R+ +G AY+L
Sbjct: 467 GLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTL 507
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 189 (71.6 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K + + L L G + I+ + D R+ A ++G +R+LV TDVA+RG
Sbjct: 533 IIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRG 592
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI + VINY+FP + +VHRVGR RAGR G + S + ++
Sbjct: 593 LDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTRED 637
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 187 (70.9 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK +Y+ L + ST I+ D + R+I F++GK ++LV T VA+R
Sbjct: 422 TMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASR 481
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYS 101
G+DI ++ VIN++ P + +VHR+GR R G +G A S
Sbjct: 482 GLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVS 521
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 187 (70.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 42/136 (30%), Positives = 67/136 (49%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VFT TK + + + L G + I+ D R +F+TGK ++V TDVA+RG
Sbjct: 391 LVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRG 450
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
ID+ + VINY++P ++ +VHR+GR RAG G A + ++D
Sbjct: 451 IDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEAK 510
Query: 123 VLADDSMKGKIRHQDG 138
D + +R+ G
Sbjct: 511 QQIDPRLAEMVRYSGG 526
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK +Y+ L + ST I+ D + R+I F++GK ++LV T VA+R
Sbjct: 422 TMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASR 481
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYS 101
G+DI ++ VIN++ P + +VHR+GR R G +G A S
Sbjct: 482 GLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVS 521
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + +L G+++ ++ + R KF+ +L+ TDVA+RG
Sbjct: 304 MIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRG 363
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A +LVS
Sbjct: 364 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVS 405
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 184 (69.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 35/106 (33%), Positives = 65/106 (61%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
+V+F T+ V+++ + + + + D+D R I +F++G RVL+ TD+ AR
Sbjct: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
GID+ + VIN++ P + + ++HR+GR R GR GVA + ++S++
Sbjct: 343 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSED 388
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K V + GL G+ + ++ + R + F+ G + L+ TD+A+RG
Sbjct: 547 IVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVESFRDGNVNFLLATDLASRG 606
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DI ++ VINY P +++VHRVGR ARAGRSG A ++ + +
Sbjct: 607 LDIKGVETVINYEAPQSHEIYVHRVGRTARAGRSGRACTIAAEPD 651
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 187 (70.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 1 MTVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAA 60
+T++F TK + + L + +T I+ D + R+ A F++G +LV T VAA
Sbjct: 401 LTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAA 460
Query: 61 RGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
RG+DIP++ VINY+ P +VHR+GR RAG +G+A + +S+
Sbjct: 461 RGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSE 506
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 42/130 (32%), Positives = 72/130 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + + +L G ++ ++ + + R + KF+ +L+ TDVA+RG
Sbjct: 269 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 328
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A + V+ + G+K
Sbjct: 329 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 388
Query: 122 PVLA--DDSM 129
PV DD +
Sbjct: 389 PVFPTQDDEV 398
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 187 (70.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK +++ L IS+T I+ D + R+ F+ GK VLV T VAAR
Sbjct: 516 TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAAR 575
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
G+DI ++ VIN++ P +VHR+GR R G +G A S +D
Sbjct: 576 GLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTD 620
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 39/105 (37%), Positives = 59/105 (56%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T+VF TK +++ L + +T I+ D + R+ A F++GK VLV T VA+R
Sbjct: 436 TMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASR 495
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
G+DIP + V+N++ P +VHR+GR R G +G A S D
Sbjct: 496 GLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPD 540
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 42/130 (32%), Positives = 72/130 (55%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + + +L G ++ ++ + + R + KF+ +L+ TDVA+RG
Sbjct: 293 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 352
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A + V+ + G+K
Sbjct: 353 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 412
Query: 122 PVLA--DDSM 129
PV DD +
Sbjct: 413 PVFPTQDDEV 422
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 35/105 (33%), Positives = 62/105 (59%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+ + + + + + ++ D+D R +F++G RVL+ TD+ ARG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+ ++
Sbjct: 332 IDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND 376
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 183 (69.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 40/122 (32%), Positives = 69/122 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + + +L G ++ ++ + + R + KF+ +L+ TDVA+RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A + V+ + G+K
Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 386
Query: 122 PV 123
PV
Sbjct: 387 PV 388
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 183 (69.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 40/122 (32%), Positives = 69/122 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + + +L G ++ ++ + + R + KF+ +L+ TDVA+RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK- 121
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A + V+ + G+K
Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 386
Query: 122 PV 123
PV
Sbjct: 387 PV 388
>POMBASE|SPCC285.03 [details] [associations]
symbol:SPCC285.03 "ATP-dependent RNA helicase Dbp6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC285.03 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14807 EMBL:D89259 PIR:T41249 PIR:T43184
RefSeq:NP_588332.1 ProteinModelPortal:Q76PD3
EnsemblFungi:SPCC285.03.1 GeneID:2538809 KEGG:spo:SPCC285.03
HOGENOM:HOG000203294 OMA:HIDQTPG OrthoDB:EOG490BK3 NextBio:20799991
Uniprot:Q76PD3
Length = 604
Score = 185 (70.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 7 ATKYH--VEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGID 64
A + H +E +H+ L + S S L RK ++F TG + +LV +D+ ARGID
Sbjct: 444 AARLHRLLELIHESLNQS-FSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGID 502
Query: 65 IPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+ + VINY+ P + +VHR+GR ARAGR G A++LV S E
Sbjct: 503 VANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSHE 545
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 37/102 (36%), Positives = 60/102 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ VE++ L + + I++DL R +F++G R+L+ TD+ ARG
Sbjct: 266 VIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
ID+ + VINY+ P + ++HR+GR R GR GVA + V+
Sbjct: 326 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT 367
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 37/102 (36%), Positives = 60/102 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ VE++ L + + I++DL R +F++G R+L+ TD+ ARG
Sbjct: 266 VIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARG 325
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
ID+ + VINY+ P + ++HR+GR R GR GVA + V+
Sbjct: 326 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT 367
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 182 (69.1 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 38/105 (36%), Positives = 59/105 (56%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F TK E++ + L I D++ R F++GK+ +++ TDVA+R
Sbjct: 249 TMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATDVASR 308
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSD 106
G+ I + VINY+ P A+ +VHR+GR ARAG G A S+ D
Sbjct: 309 GLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADED 353
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 182 (69.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/199 (29%), Positives = 89/199 (44%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF TK + V L G S ++ DL+ R +F VLV TDVAARG
Sbjct: 244 VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARG 303
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI +LDAV NY+ ++ +HR+GR RAG G AY+ + + R+
Sbjct: 304 LDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREI 363
Query: 123 V---LADDSMKGKIRHQDGMFG-KIPQGLMED-QISEIMNWVELDADMEGIQ--KTCNNA 175
L S+ G + M +I G E + +I+ + D +EG Q K
Sbjct: 364 TSESLPSLSLLGSAPNAPTMITLQIDGGKKEKLRPGDILGALTGDNGIEGTQVGKILVTD 423
Query: 176 YKKYVKSRPGASVESVKKV 194
Y+ YV + +++ K+
Sbjct: 424 YRAYVAVNRKVAKKALSKI 442
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 182 (69.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/199 (29%), Positives = 89/199 (44%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
VVF TK + V L G S ++ DL+ R +F VLV TDVAARG
Sbjct: 244 VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARG 303
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
+DI +LDAV NY+ ++ +HR+GR RAG G AY+ + + R+
Sbjct: 304 LDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREI 363
Query: 123 V---LADDSMKGKIRHQDGMFG-KIPQGLMED-QISEIMNWVELDADMEGIQ--KTCNNA 175
L S+ G + M +I G E + +I+ + D +EG Q K
Sbjct: 364 TSESLPSLSLLGSAPNAPTMITLQIDGGKKEKLRPGDILGALTGDNGIEGTQVGKILVTD 423
Query: 176 YKKYVKSRPGASVESVKKV 194
Y+ YV + +++ K+
Sbjct: 424 YRAYVAVNRKVAKKALSKI 442
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 184 (69.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/105 (34%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F TK V + L G +S + D++ R+ + + G++ +L+ TDVAARG
Sbjct: 249 IIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARG 308
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+D+ + V+NY+ P ++ +VHR+GR RAGR+G A V + E
Sbjct: 309 LDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRE 353
>UNIPROTKB|E2R5R1 [details] [associations]
symbol:DDX51 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 KO:K14807 OMA:HIDQTPG GeneTree:ENSGT00550000075141
CTD:317781 EMBL:AAEX03014583 RefSeq:XP_543351.2
Ensembl:ENSCAFT00000010222 GeneID:486226 KEGG:cfa:486226
Uniprot:E2R5R1
Length = 631
Score = 184 (69.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 18 ILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFP 77
+ G+++ S P RK+ +F+ GKI++L+ TD ARGID+ + VINY+ P
Sbjct: 489 VQAFGGVAAAEFSSRCRPGQRKVVLKQFEQGKIQLLISTDAMARGIDVQGVQLVINYDAP 548
Query: 78 CKAKLFVHRVGRCARAGRSGVAYSLV 103
+ +VHRVGR ARAGR+G A++L+
Sbjct: 549 QYLRTYVHRVGRTARAGRTGQAFTLL 574
>UNIPROTKB|G4N9X9 [details] [associations]
symbol:MGG_03229 "ATP-dependent RNA helicase dbp6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM001234
GO:GO:0008026 KO:K14807 RefSeq:XP_003716750.1
EnsemblFungi:MGG_03229T0 GeneID:2676463 KEGG:mgr:MGG_03229
Uniprot:G4N9X9
Length = 896
Score = 186 (70.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 38 RKINAAKFQTGKIRVLVVTDVAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSG 97
RK ++++GK+R+LV +D+ ARG+D+P+LD V+NY+ P + +VHRVGR ARAGR+G
Sbjct: 748 RKKVINQYKSGKLRILVASDLVARGLDLPNLDHVVNYDMPPSVRTYVHRVGRTARAGRAG 807
Query: 98 VAYSLVSSDEXXXXXXXXXXXGRKP 122
A++ + E KP
Sbjct: 808 RAWTFFTKTEAGWFFAEIASSKSKP 832
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 180 (68.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 37/105 (35%), Positives = 61/105 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
V+F T+ V+++ + A + + ++ ++ R F+ G RVL+ TDV ARG
Sbjct: 268 VIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARG 327
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
ID+ + VINY+ P + ++HR+GR R GR GVA + V+SD+
Sbjct: 328 IDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDD 372
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 181 (68.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ E + L G ++ + +L AR +F G+ ++LV TDVA+RG
Sbjct: 250 IIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
+D+ ++ VIN++ P A+ +VHR+GR RAG G A SLV
Sbjct: 310 LDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLV 350
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 181 (68.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++FTAT+ E + L G ++ + +L AR +F G+ ++LV TDVA+RG
Sbjct: 250 IIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRG 309
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLV 103
+D+ ++ VIN++ P A+ +VHR+GR RAG G A SLV
Sbjct: 310 LDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLV 350
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 181 (68.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 38/119 (31%), Positives = 67/119 (56%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F +T + + +L G ++ ++ + + R + KF+ +L+ TDVA+RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRK 121
+DIP +D V+N++ P +K ++HRVGR ARAGRSG A + V+ + G+K
Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKK 385
>ASPGD|ASPL0000059362 [details] [associations]
symbol:AN0637 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001308
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14807 HOGENOM:HOG000203294 EMBL:AACD01000008 RefSeq:XP_658241.1
ProteinModelPortal:Q5BFP3 EnsemblFungi:CADANIAT00002039
GeneID:2876415 KEGG:ani:AN0637.2 OMA:KQAREAC OrthoDB:EOG4CRQ7F
Uniprot:Q5BFP3
Length = 853
Score = 185 (70.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 41/110 (37%), Positives = 66/110 (60%)
Query: 3 VVFTATKYHVEYVHKILGL-----AGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTD 57
++FT + + ++L L +G+ T + S+ +RK +A ++ GKI +++ TD
Sbjct: 685 LIFTKSSESASRLSRLLALLNPSISGLIGTIVKSNKSSASRKTLSA-YRQGKISIIIATD 743
Query: 58 VAARGIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
A+RG+D+ SL VINY+ P +VHRVGR ARAG G A++LV+ E
Sbjct: 744 RASRGLDLQSLTHVINYDVPASITTYVHRVGRTARAGNEGSAWTLVAHRE 793
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 36/102 (35%), Positives = 60/102 (58%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F K V+ +H+ L L G+ + I+ D R ++ GK VLV TDVA++G
Sbjct: 432 LIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKG 491
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVS 104
+D P++ VINY+ P + +VHR+GR R+ G+A +L++
Sbjct: 492 LDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLIN 533
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 182 (69.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 2 TVVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAAR 61
T++F +TK + + K L G + I+ D D R +F+ G+ ++V TDVAAR
Sbjct: 363 TLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAAR 422
Query: 62 GIDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYS 101
GID+ ++ VINY+ P + +VHR+GR RAG +G A S
Sbjct: 423 GIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAIS 462
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 63/216 (29%), Positives = 102/216 (47%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T+ +V++V++ L I+ + R F+ GK R LV TDVAARG
Sbjct: 246 IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
IDI ++ VINY+ P + + +VHR GR RAG SG A + ++ E G
Sbjct: 306 IDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIGFAI 365
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELD--ADM-EGIQKTCNNAYKKY 179
A+ K ++ M GK E++I + ++ D AD+ +GI K N KK
Sbjct: 366 PKANAPSKEEV-----MKGK---AAFEEKI-QAKPTIKKDKSADINKGIMKLYFNGGKKK 416
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAE 215
K R V ++ K++ + + + + N+ E
Sbjct: 417 -KIRAVDFVGTIAKIQGVSAEDIGIITIQDNVSYVE 451
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 63/216 (29%), Positives = 102/216 (47%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
++F T+ +V++V++ L I+ + R F+ GK R LV TDVAARG
Sbjct: 246 IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARG 305
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDEXXXXXXXXXXXGRKP 122
IDI ++ VINY+ P + + +VHR GR RAG SG A + ++ E G
Sbjct: 306 IDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIGFAI 365
Query: 123 VLADDSMKGKIRHQDGMFGKIPQGLMEDQISEIMNWVELD--ADM-EGIQKTCNNAYKKY 179
A+ K ++ M GK E++I + ++ D AD+ +GI K N KK
Sbjct: 366 PKANAPSKEEV-----MKGK---AAFEEKI-QAKPTIKKDKSADINKGIMKLYFNGGKKK 416
Query: 180 VKSRPGASVESVKKVKELELATMQVHPLFRNIGSAE 215
K R V ++ K++ + + + + N+ E
Sbjct: 417 -KIRAVDFVGTIAKIQGVSAEDIGIITIQDNVSYVE 451
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 185 (70.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 41/105 (39%), Positives = 60/105 (57%)
Query: 3 VVFTATKYHVEYVHKILGLAGISSTYIYSDLDPTARKINAAKFQTGKIRVLVVTDVAARG 62
+VF K + E + L G S ++ D+D + R A F+ + VLV TDVAARG
Sbjct: 506 LVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARG 565
Query: 63 IDIPSLDAVINYNFPCKAKLFVHRVGRCARAGRSGVAYSLVSSDE 107
+DIPS+ V+NY+ HR+GR RAG GVAY+L+++ +
Sbjct: 566 LDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKD 610
WARNING: HSPs involving 523 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 240 0.00093 113 3 11 22 0.41 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 773
No. of states in DFA: 594 (63 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.56u 0.11s 19.67t Elapsed: 00:00:01
Total cpu time: 19.57u 0.11s 19.68t Elapsed: 00:00:02
Start: Thu Aug 15 17:32:23 2013 End: Thu Aug 15 17:32:25 2013
WARNINGS ISSUED: 2