BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18035
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242015175|ref|XP_002428249.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
gi|212512810|gb|EEB15511.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
Length = 723
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 59/77 (76%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELGKFTKL++ +LGGDSMD QF +H +PDI+VATPGRFLHI VEMELKL+S
Sbjct: 114 QTVKFIKELGKFTKLKALAILGGDSMDQQFGAIHENPDIIVATPGRFLHICVEMELKLTS 173
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 174 VEYVVFDEADRLFEMGF 190
>gi|332025035|gb|EGI65222.1| ATP-dependent RNA helicase DDX54 [Acromyrmex echinatior]
Length = 776
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 71/82 (86%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT L+S +LGGDSMDNQF+ +H +PDI+VATPGRFLHI VEM+L+L +
Sbjct: 121 QTLKFIKELGRFTGLKSAVILGGDSMDNQFSAIHGNPDIIVATPGRFLHICVEMDLQLKN 180
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
I+Y+VFDEADRLFEMGF + Q
Sbjct: 181 IEYIVFDEADRLFEMGFGEQIQ 202
>gi|156396703|ref|XP_001637532.1| predicted protein [Nematostella vectensis]
gi|156224645|gb|EDO45469.1| predicted protein [Nematostella vectensis]
Length = 700
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 6 INYLISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QT KF+KELG+FT L+S+ +LGGDS++ QFA +H +PDIVVATPGR
Sbjct: 90 IRALILSPTRELALQTQKFIKELGRFTGLKSSVILGGDSLEGQFAAIHTNPDIVVATPGR 149
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
FLH+V+EMELKLSS++YVVFDEADRLFEMGF
Sbjct: 150 FLHVVMEMELKLSSVEYVVFDEADRLFEMGF 180
>gi|167518760|ref|XP_001743720.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777682|gb|EDQ91298.1| predicted protein [Monosiga brevicollis MX1]
Length = 787
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 57/77 (74%), Positives = 68/77 (88%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFKFVKELG+F+ L+S +LGGDSMD+QF +H +PDIVVATPGRFLH++VEMEL L +
Sbjct: 87 QTFKFVKELGRFSDLRSILILGGDSMDSQFGDMHTNPDIVVATPGRFLHLIVEMELSLVT 146
Query: 77 IQYVVFDEADRLFEMGF 93
+YVVFDEADRLFEMGF
Sbjct: 147 TEYVVFDEADRLFEMGF 163
>gi|270000966|gb|EEZ97413.1| hypothetical protein TcasGA2_TC011242 [Tribolium castaneum]
Length = 761
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT L+S +LGGDSMD+QF+ +H +PDI+VATPGRFLH+ +EMELKL+S
Sbjct: 118 QTLKFIKELGRFTGLKSAVILGGDSMDDQFSAIHGNPDIIVATPGRFLHVCIEMELKLNS 177
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMG
Sbjct: 178 VEYVVFDEADRLFEMGL 194
>gi|383849107|ref|XP_003700188.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Megachile
rotundata]
Length = 770
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT LQ+ +LGGD+M+NQF+ +H +PDI+VATPGRFLHI +EM+L+L+S
Sbjct: 121 QTLKFIKELGRFTGLQAAVILGGDNMENQFSTIHGNPDILVATPGRFLHICIEMDLQLNS 180
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 181 IEYVVFDEADRLFEMGF 197
>gi|157121423|ref|XP_001659898.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108874627|gb|EAT38852.1| AAEL009285-PA [Aedes aegypti]
Length = 784
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFKF+K+LGKFT L++ +LGGDSMD+QFA +H PDI+VATPGRFLH+ VEM+LKLSS
Sbjct: 123 QTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAIHTLPDIIVATPGRFLHLCVEMDLKLSS 182
Query: 77 IQYVVFDEADRLFEMGF 93
+QY VFDEADRLFEMGF
Sbjct: 183 VQYCVFDEADRLFEMGF 199
>gi|443712578|gb|ELU05832.1| hypothetical protein CAPTEDRAFT_148777 [Capitella teleta]
Length = 902
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 68/77 (88%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+ +LGGDSM+NQFA +H +PDI++ATPGRF+HI+VEME+KLS
Sbjct: 233 QTLKFTKELGKFTGLKPAVILGGDSMENQFAAIHENPDILIATPGRFMHILVEMEMKLSE 292
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVV+DEADRLFEMGF
Sbjct: 293 VQYVVYDEADRLFEMGF 309
>gi|442750425|gb|JAA67372.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 767
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/77 (74%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+ST +LGGD+M++QF +H +PD+++ATPGRFLHIV+EM+LKLSS
Sbjct: 99 QTHKFAKELGKFTDLKSTVILGGDNMEDQFEAIHENPDVLIATPGRFLHIVMEMDLKLSS 158
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 159 IKYVVFDEADRLFEMGF 175
>gi|241999744|ref|XP_002434515.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215497845|gb|EEC07339.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 771
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/77 (74%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+ST +LGGD+M++QF +H +PD+++ATPGRFLHIV+EM+LKLSS
Sbjct: 103 QTHKFAKELGKFTDLKSTVILGGDNMEDQFEAIHENPDVLIATPGRFLHIVMEMDLKLSS 162
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 163 IKYVVFDEADRLFEMGF 179
>gi|340723049|ref|XP_003399911.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Bombus terrestris]
Length = 772
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELGKFT L++ +LGGDSM+NQF+ +H +PDI+VATPGRFLHI +EM+L+L++
Sbjct: 121 QTLKFIKELGKFTDLKAAVILGGDSMENQFSAIHGNPDILVATPGRFLHICIEMDLQLNN 180
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 181 IEYVVFDEADRLFEMGF 197
>gi|380029382|ref|XP_003698353.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis florea]
Length = 772
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 71/77 (92%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT L++T +LGGD+M+NQF+ +H +PDI++ATPGRFLHI VEM+L+L++
Sbjct: 121 QTLKFIKELGRFTGLKATLILGGDNMENQFSAIHGNPDILIATPGRFLHICVEMDLQLNN 180
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 181 IEYVVFDEADRLFEMGF 197
>gi|307175593|gb|EFN65503.1| ATP-dependent RNA helicase DDX54 [Camponotus floridanus]
Length = 751
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 71/82 (86%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT L++ +LGGDSMDNQF+ +H +PDI+VATPGRF+HI +EM+LKL +
Sbjct: 93 QTLKFIKELGRFTGLKAVVILGGDSMDNQFSIIHENPDIIVATPGRFVHICIEMDLKLKN 152
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 153 VEYVVFDEADRLFEMGFGEQIQ 174
>gi|350423736|ref|XP_003493575.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Bombus impatiens]
Length = 772
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELGKFT L++ +LGGDSM+NQF+ +H +PDI+VATPGRFLHI +EM+L+L++
Sbjct: 121 QTLKFIKELGKFTDLKAAVILGGDSMENQFSAIHGNPDILVATPGRFLHICIEMDLQLNN 180
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 181 IEYVVFDEADRLFEMGF 197
>gi|328781928|ref|XP_397101.4| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis mellifera]
Length = 772
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 71/77 (92%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT L++T +LGGD+M+NQF+ +H +PDI++ATPGRFLHI +EM+L+L++
Sbjct: 121 QTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNPDILIATPGRFLHICIEMDLQLNN 180
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 181 IEYVVFDEADRLFEMGF 197
>gi|198433176|ref|XP_002130371.1| PREDICTED: similar to ATP-dependent RNA helicase [Ciona
intestinalis]
Length = 816
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 68/77 (88%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KFVKELG+FT L++ C+LGGDSMD QF+ +H +PD+ +ATPGR +H+++EMEL+LS+
Sbjct: 153 QTLKFVKELGRFTSLRTACILGGDSMDEQFSAMHENPDVTIATPGRLMHVLIEMELRLSN 212
Query: 77 IQYVVFDEADRLFEMGF 93
I YVVFDEADRLFE+GF
Sbjct: 213 IHYVVFDEADRLFELGF 229
>gi|307193157|gb|EFN76062.1| ATP-dependent RNA helicase DDX54 [Harpegnathos saltator]
Length = 772
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELGKFT L++ +LGGDS+D+QF+ +H +PDI+VATPGRFLHI VEM+L+L +
Sbjct: 120 QTLKFIKELGKFTGLKAAVILGGDSIDDQFSAIHGNPDIIVATPGRFLHICVEMDLQLKN 179
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 180 VEYVVFDEADRLFEMGF 196
>gi|170045492|ref|XP_001850341.1| ATP-dependent RNA helicase DDX54 [Culex quinquefasciatus]
gi|167868515|gb|EDS31898.1| ATP-dependent RNA helicase DDX54 [Culex quinquefasciatus]
Length = 793
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 56/77 (72%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFKF+K+LGKF L++ +LGGDSMD QFA +H PDI+VATPGRFLH+ VEM+LKLS+
Sbjct: 123 QTFKFIKQLGKFMDLKTILVLGGDSMDTQFAAIHTLPDIIVATPGRFLHLCVEMDLKLSA 182
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 183 IKYCVFDEADRLFEMGF 199
>gi|28575014|ref|NP_612028.4| CG32344 [Drosophila melanogaster]
gi|18447311|gb|AAL68229.1| LD28101p [Drosophila melanogaster]
gi|23092697|gb|AAN11439.1| CG32344 [Drosophila melanogaster]
gi|220947558|gb|ACL86322.1| CG32344-PA [synthetic construct]
Length = 827
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L+S +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 184 IEYVVFDEADRLFEMGF 200
>gi|194864582|ref|XP_001971010.1| GG14669 [Drosophila erecta]
gi|190652793|gb|EDV50036.1| GG14669 [Drosophila erecta]
Length = 827
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L+S +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 184 IEYVVFDEADRLFEMGF 200
>gi|195583246|ref|XP_002081434.1| GD25714 [Drosophila simulans]
gi|194193443|gb|EDX07019.1| GD25714 [Drosophila simulans]
Length = 827
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L+S +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 184 IEYVVFDEADRLFEMGF 200
>gi|322787030|gb|EFZ13254.1| hypothetical protein SINV_10425 [Solenopsis invicta]
Length = 775
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 70/82 (85%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF+KELG+FT +++ +LGGDSMD+QF +H +PDI+VATPGRFLHI VEM+L+L +
Sbjct: 121 QTLKFIKELGRFTGFKASVILGGDSMDDQFNAIHGNPDIIVATPGRFLHICVEMDLQLKN 180
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 181 VEYVVFDEADRLFEMGFGEQIQ 202
>gi|195336302|ref|XP_002034780.1| GM14284 [Drosophila sechellia]
gi|194127873|gb|EDW49916.1| GM14284 [Drosophila sechellia]
Length = 827
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L+S +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 184 IEYVVFDEADRLFEMGF 200
>gi|427785439|gb|JAA58171.1| Putative atp-dependent rna helicase ddx54 [Rhipicephalus
pulchellus]
Length = 816
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+ST +LGGDSM++QF +H +PD+++ATPGRFLH+V+EM L+L+S
Sbjct: 141 QTHKFAKELGKFTDLRSTVILGGDSMEDQFEAIHENPDLLIATPGRFLHVVMEMNLRLNS 200
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 201 VKYVVFDEADRLFEMGF 217
>gi|195011457|ref|XP_001983158.1| GH15746 [Drosophila grimshawi]
gi|193896640|gb|EDV95506.1| GH15746 [Drosophila grimshawi]
Length = 786
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 81 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLTS 140
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 141 IEYVVFDEADRLFEMGF 157
>gi|156552297|ref|XP_001600622.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Nasonia
vitripennis]
Length = 782
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT +F+KE+G+FT L+S+ +LGGDSMDNQF+ +H +PDI+VATPGRFLHI +EM++ L S
Sbjct: 123 QTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNPDIIVATPGRFLHICIEMDMNLKS 182
Query: 77 IQYVVFDEADRLFEMGF 93
I++V+FDEADRLFEMGF
Sbjct: 183 IEFVIFDEADRLFEMGF 199
>gi|291239093|ref|XP_002739459.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Saccoglossus
kowalevskii]
Length = 851
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF +ELGKF L+S +LGGD MD+QFA LH +PDI++ATPGR LH++VEM+LKL+S
Sbjct: 163 QTLKFTRELGKFLGLRSAVILGGDKMDDQFAALHENPDIIIATPGRLLHVLVEMDLKLNS 222
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 223 LEYVVFDEADRLFEMGF 239
>gi|118777945|ref|XP_308366.3| AGAP007511-PA [Anopheles gambiae str. PEST]
gi|116132145|gb|EAA04660.3| AGAP007511-PA [Anopheles gambiae str. PEST]
Length = 816
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 68/77 (88%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+K+LG+F L++ +LGGDSMD+QFA +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 125 QTYKFIKQLGRFMDLKAILVLGGDSMDSQFAAVHTLPDVIVATPGRFLHLCVEMDLKLNS 184
Query: 77 IQYVVFDEADRLFEMGF 93
+QY VFDEADRLFEMGF
Sbjct: 185 VQYCVFDEADRLFEMGF 201
>gi|195429198|ref|XP_002062651.1| GK17652 [Drosophila willistoni]
gi|194158736|gb|EDW73637.1| GK17652 [Drosophila willistoni]
Length = 782
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 81 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 140
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 141 IEYVVFDEADRLFEMGF 157
>gi|195490088|ref|XP_002092996.1| GE21030 [Drosophila yakuba]
gi|194179097|gb|EDW92708.1| GE21030 [Drosophila yakuba]
Length = 827
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 184 IEYVVFDEADRLFEMGF 200
>gi|194747377|ref|XP_001956128.1| GF25051 [Drosophila ananassae]
gi|190623410|gb|EDV38934.1| GF25051 [Drosophila ananassae]
Length = 826
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 123 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 182
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 183 IEYVVFDEADRLFEMGF 199
>gi|328708487|ref|XP_003243704.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Acyrthosiphon
pisum]
Length = 777
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + QT KF+KE+GKFT L+S +LGGD M+ QF+ +H++PDIVVA
Sbjct: 97 GHRGIRALILSPTRELAVQTLKFLKEIGKFTNLKSAVILGGDPMEAQFSTMHSAPDIVVA 156
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGRFLH+ VEM LKL IQYVVFDEADRLFEMGF
Sbjct: 157 TPGRFLHLCVEMSLKLPYIQYVVFDEADRLFEMGF 191
>gi|195108365|ref|XP_001998763.1| GI24146 [Drosophila mojavensis]
gi|193915357|gb|EDW14224.1| GI24146 [Drosophila mojavensis]
Length = 829
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+K+LG+F +L++ +LGGDSMD+QF+ +H PDI+VATPGRFLH+ VEM+LKL+S
Sbjct: 123 QTYKFIKDLGRFMELKTILVLGGDSMDSQFSAIHTCPDIIVATPGRFLHLCVEMDLKLNS 182
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 183 IEYVVFDEADRLFEMGF 199
>gi|198462641|ref|XP_001352498.2| GA16838 [Drosophila pseudoobscura pseudoobscura]
gi|198150914|gb|EAL29995.2| GA16838 [Drosophila pseudoobscura pseudoobscura]
Length = 852
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I YVVFDEADRLFEMGF
Sbjct: 184 IDYVVFDEADRLFEMGF 200
>gi|328708524|ref|XP_001949320.2| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Acyrthosiphon pisum]
Length = 478
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + QT KF+KE+GKFT L+S +LGGD M+ QF+ +H++PDIVVA
Sbjct: 97 GHRGIRALILSPTRELAVQTLKFLKEIGKFTNLKSAVILGGDPMEAQFSTMHSAPDIVVA 156
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGRFLH+ VEM LKL IQYVVFDEADRLFEMGF
Sbjct: 157 TPGRFLHLCVEMSLKLPYIQYVVFDEADRLFEMGF 191
>gi|195170534|ref|XP_002026067.1| GL16100 [Drosophila persimilis]
gi|194110947|gb|EDW32990.1| GL16100 [Drosophila persimilis]
Length = 854
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 69/77 (89%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+KELG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 124 QTYKFIKELGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I YVVFDEADRLFEMGF
Sbjct: 184 IDYVVFDEADRLFEMGF 200
>gi|126324487|ref|XP_001378612.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Monodelphis domestica]
Length = 895
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 66/82 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 209 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQS 268
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
+QY VFDEADRLFEMGF + Q
Sbjct: 269 VQYAVFDEADRLFEMGFAEQLQ 290
>gi|195389156|ref|XP_002053243.1| GJ23450 [Drosophila virilis]
gi|194151329|gb|EDW66763.1| GJ23450 [Drosophila virilis]
Length = 829
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 70/77 (90%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+KF+K+LG+F +L++ +LGGDSMD+QF+ +H PD++VATPGRFLH+ VEM+LKL+S
Sbjct: 123 QTYKFIKDLGRFMELKTILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNS 182
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 183 IEYVVFDEADRLFEMGF 199
>gi|354497513|ref|XP_003510864.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Cricetulus
griseus]
Length = 875
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|355683380|gb|AER97088.1| DEAD box polypeptide 54 [Mustela putorius furo]
Length = 877
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
I+YVVFDEADRLFEMGF + Q
Sbjct: 240 IEYVVFDEADRLFEMGFAEQLQ 261
>gi|164419743|ref|NP_001104792.1| ATP-dependent RNA helicase DDX54 isoform 1 [Homo sapiens]
gi|19110894|gb|AAL85336.1|AF478457_1 ATP-dependent RNA helicase [Homo sapiens]
gi|119618445|gb|EAW98039.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_a [Homo
sapiens]
Length = 882
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|363740165|ref|XP_003642273.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Gallus gallus]
Length = 858
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 156 QTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 215
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 216 VEYVVFDEADRLFEMGFAEQLQ 237
>gi|51094101|ref|NP_076977.3| ATP-dependent RNA helicase DDX54 isoform 2 [Homo sapiens]
gi|46576615|sp|Q8TDD1.2|DDX54_HUMAN RecName: Full=ATP-dependent RNA helicase DDX54; AltName:
Full=ATP-dependent RNA helicase DP97; AltName: Full=DEAD
box RNA helicase 97 kDa; AltName: Full=DEAD box protein
54
gi|162319036|gb|AAI56670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [synthetic construct]
Length = 881
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|426374226|ref|XP_004053980.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Gorilla gorilla
gorilla]
Length = 881
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|38014855|gb|AAH05848.2| DDX54 protein, partial [Homo sapiens]
Length = 864
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 164 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 223
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 224 VEYVVFDEADRLFEMGFAEQLQ 245
>gi|354497511|ref|XP_003510863.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 1 [Cricetulus
griseus]
Length = 876
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|383421509|gb|AFH33968.1| ATP-dependent RNA helicase DDX54 isoform 1 [Macaca mulatta]
Length = 884
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|402887738|ref|XP_003907240.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Papio anubis]
Length = 883
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|28301751|gb|AAN59978.1| DEAD box RNA helicase DP97 [Homo sapiens]
gi|119618446|gb|EAW98040.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_b [Homo
sapiens]
Length = 865
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 165 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 224
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 225 VEYVVFDEADRLFEMGFAEQLQ 246
>gi|426247766|ref|XP_004017647.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Ovis aries]
Length = 864
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|410216684|gb|JAA05561.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253652|gb|JAA14793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293490|gb|JAA25345.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354051|gb|JAA43629.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 885
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|410216682|gb|JAA05560.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253650|gb|JAA14792.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293488|gb|JAA25344.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354049|gb|JAA43628.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 882
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|397525044|ref|XP_003832488.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Pan paniscus]
Length = 884
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|114647100|ref|XP_001152281.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 5 [Pan
troglodytes]
Length = 884
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|47223591|emb|CAF99200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 532
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 68/82 (82%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFTKL++ +LGGDSMD+QFA LH +PDI++ TPGR +H++ EM LKL +
Sbjct: 122 QTMKFTKELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQN 181
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 182 VEYVVFDEADRLFEMGFAEQLQ 203
>gi|109098826|ref|XP_001111246.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Macaca
mulatta]
Length = 883
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|403281618|ref|XP_003932278.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Saimiri boliviensis
boliviensis]
Length = 879
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|410904152|ref|XP_003965556.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Takifugu
rubripes]
Length = 863
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 66/77 (85%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFTKL++ +LGGDSMD+QFA LH +PDI++ TPGR +H++ EM LKL +
Sbjct: 159 QTMKFTKELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLHN 218
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 219 MEYVVFDEADRLFEMGF 235
>gi|355564704|gb|EHH21204.1| hypothetical protein EGK_04216 [Macaca mulatta]
Length = 790
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|444723055|gb|ELW63720.1| ATP-dependent RNA helicase DDX54 [Tupaia chinensis]
Length = 937
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|358416383|ref|XP_615157.5| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
Length = 885
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 190 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 249
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 250 VEYVVFDEADRLFEMGFAEQLQ 271
>gi|344257761|gb|EGW13865.1| ATP-dependent RNA helicase DDX54 [Cricetulus griseus]
Length = 861
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 164 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQS 223
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 224 VEYVVFDEADRLFEMGFAEQLQ 245
>gi|194214292|ref|XP_001915035.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Equus caballus]
Length = 860
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 161 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 220
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 221 VEYVVFDEADRLFEMGFAEQLQ 242
>gi|297693028|ref|XP_002823828.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Pongo abelii]
Length = 883
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|440898266|gb|ELR49795.1| ATP-dependent RNA helicase DDX54 [Bos grunniens mutus]
Length = 872
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|405968650|gb|EKC33699.1| ATP-dependent RNA helicase DDX54 [Crassostrea gigas]
Length = 472
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 66/77 (85%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGK+T L++ +LGGD MD+QFA LH +PDI++ATPGR +H++VEME KL S
Sbjct: 131 QTLKFTKELGKYTGLRAAVVLGGDKMDDQFAALHENPDIIIATPGRLMHVLVEMEKKLKS 190
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 191 VEYVVFDEADRLFEMGF 207
>gi|300796770|ref|NP_001178477.1| ATP-dependent RNA helicase DDX54 [Rattus norvegicus]
Length = 874
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|297484847|ref|XP_002694562.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
gi|296478588|tpg|DAA20703.1| TPA: DEAD box RNA helicase DP97-like [Bos taurus]
Length = 876
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|321464010|gb|EFX75021.1| hypothetical protein DAPPUDRAFT_306922 [Daphnia pulex]
Length = 825
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF +ELGKFT L++ +LGGDSM+ QFA +H PDI++ATPGRF H+ VEMELKL
Sbjct: 119 QTLKFTRELGKFTGLKAATILGGDSMEAQFAAMHEIPDIIIATPGRFAHLCVEMELKLKE 178
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 179 IEYVVFDEADRLFEMGF 195
>gi|348551186|ref|XP_003461411.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Cavia
porcellus]
Length = 876
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|348551184|ref|XP_003461410.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Cavia
porcellus]
Length = 875
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|395513937|ref|XP_003761178.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Sarcophilus harrisii]
Length = 757
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 66/82 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 123 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLHS 182
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
+QY VFDEADRLFEMGF + Q
Sbjct: 183 VQYAVFDEADRLFEMGFAEQLQ 204
>gi|148687811|gb|EDL19758.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 855
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 182 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 241
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 242 VEYVVFDEADRLFEMGFAEQLQ 263
>gi|26327531|dbj|BAC27509.1| unnamed protein product [Mus musculus]
Length = 909
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|449268056|gb|EMC78927.1| ATP-dependent RNA helicase DDX54, partial [Columba livia]
Length = 797
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM+LKL +
Sbjct: 106 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMKLKLHT 165
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 166 VEYVVFDEADRLFEMGFAEQLQ 187
>gi|28076989|ref|NP_082317.1| ATP-dependent RNA helicase DDX54 [Mus musculus]
gi|46576606|sp|Q8K4L0.1|DDX54_MOUSE RecName: Full=ATP-dependent RNA helicase DDX54; AltName: Full=DEAD
box protein 54
gi|21325958|gb|AAM47540.1|AF319547_1 ATP-dependent RNA-helicase [Mus musculus]
gi|55249609|gb|AAH43699.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 874
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|405975829|gb|EKC40371.1| ATP-dependent RNA helicase DDX54, partial [Crassostrea gigas]
Length = 742
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 66/77 (85%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGK+T L++ +LGGD MD+QFA LH +PDI++ATPGR +H++VEME KL S
Sbjct: 118 QTLKFTKELGKYTGLRAAVVLGGDKMDDQFAALHENPDIIIATPGRLMHVLVEMEKKLKS 177
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 178 VEYVVFDEADRLFEMGF 194
>gi|26327389|dbj|BAC27438.1| unnamed protein product [Mus musculus]
Length = 874
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>gi|431914219|gb|ELK15477.1| ATP-dependent RNA helicase DDX54 [Pteropus alecto]
Length = 942
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QF+ LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDKMEDQFSALHENPDIIIATPGRLMHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|27545287|ref|NP_775375.1| ATP-dependent RNA helicase DDX54 [Danio rerio]
gi|20977591|gb|AAM28223.1| ATP-dependent RNA helicase [Danio rerio]
Length = 862
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGDSMD+QFA LH +PDI++ TPGR +H++ EM LKL S
Sbjct: 163 QTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIQEMNLKLQS 222
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 223 VEYVVFDEADRLFEMGF 239
>gi|326929996|ref|XP_003211139.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Meleagris gallopavo]
Length = 831
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 144 QTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLHS 203
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 204 MEYVVFDEADRLFEMGFAEQLQ 225
>gi|296212991|ref|XP_002753123.1| PREDICTED: ATP-dependent RNA helicase DDX54, partial [Callithrix
jacchus]
Length = 471
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|259155174|ref|NP_001158829.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
gi|223647616|gb|ACN10566.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
Length = 875
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD MD+QFA LH +PDI++ TPGR +H+V+EM LKL S
Sbjct: 162 QTMKFTKELGKFTGLKTALILGGDRMDDQFAALHENPDIIIGTPGRLMHVVMEMNLKLQS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 222 VEYVVFDEADRLFEMGF 238
>gi|432094964|gb|ELK26372.1| ATP-dependent RNA helicase DDX54 [Myotis davidii]
Length = 829
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QF+ LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 132 QTMKFTKELGKFTGLKTALILGGDKMEDQFSALHENPDIIIATPGRLMHVAVEMNLKLQS 191
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 192 VEYVVFDEADRLFEMGFAEQLQ 213
>gi|349803309|gb|AEQ17127.1| putative dead (asp-glu-ala-asp) box polypeptide 54 [Pipa
carvalhoi]
Length = 114
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +HI VEM LKL S
Sbjct: 21 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHIAVEMNLKLHS 80
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 81 VEYIVFDEADRLFEMGF 97
>gi|301779842|ref|XP_002925338.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Ailuropoda
melanoleuca]
Length = 863
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM L+L S
Sbjct: 168 QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLRLQS 227
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 228 VEYVVFDEADRLFEMGFAEQLQ 249
>gi|417405072|gb|JAA49261.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 876
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QF+ LH +PD+++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGKFTGLKTALILGGDKMEDQFSALHENPDVIIATPGRLMHVAVEMNLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|147898895|ref|NP_001088266.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus laevis]
gi|83318280|gb|AAI08845.1| LOC495097 protein [Xenopus laevis]
Length = 846
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ +EM LKL S
Sbjct: 160 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRS 219
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 220 VEYVVFDEADRLFEMGF 236
>gi|281343478|gb|EFB19062.1| hypothetical protein PANDA_014817 [Ailuropoda melanoleuca]
Length = 819
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM L+L S
Sbjct: 124 QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLRLQS 183
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 184 VEYVVFDEADRLFEMGFAEQLQ 205
>gi|312379831|gb|EFR25992.1| hypothetical protein AND_08228 [Anopheles darlingi]
Length = 803
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTF+F+K+LG+F L++ +LGGDSMD QFA +H PDI+VATPGRFLH+ VEM+LKL S
Sbjct: 124 QTFRFIKQLGRFMDLKTILVLGGDSMDAQFAAVHTLPDIIVATPGRFLHLCVEMDLKLGS 183
Query: 77 IQYVVFDEADRLFEMGF 93
+QY V DEADRLFEMGF
Sbjct: 184 VQYCVLDEADRLFEMGF 200
>gi|395834008|ref|XP_003790009.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Otolemur garnettii]
Length = 859
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 165 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 224
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 225 VEYVVFDEADRLFEMGF 241
>gi|54038020|gb|AAH84268.1| LOC495097 protein, partial [Xenopus laevis]
Length = 717
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ +EM LKL S
Sbjct: 160 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRS 219
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 220 VEYVVFDEADRLFEMGF 236
>gi|326435254|gb|EGD80824.1| hypothetical protein PTSG_11725 [Salpingoeca sp. ATCC 50818]
Length = 818
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 70/81 (86%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +QTFKF+KELG+ T L+ +LGGD+MD+QF +HA+PD++VATPGRFLH++VEMEL
Sbjct: 118 LAEQTFKFIKELGRRTDLRVALILGGDNMDDQFGWMHANPDVIVATPGRFLHLLVEMELS 177
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L +++YVVFDEAD+LFE GF+
Sbjct: 178 LKAVEYVVFDEADQLFEKGFE 198
>gi|62740160|gb|AAH94142.1| LOC495097 protein, partial [Xenopus laevis]
Length = 693
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ +EM LKL S
Sbjct: 160 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRS 219
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 220 VEYVVFDEADRLFEMGF 236
>gi|351694739|gb|EHA97657.1| ATP-dependent RNA helicase DDX54 [Heterocephalus glaber]
Length = 876
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELG+FT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTMKFTKELGRFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLHS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>gi|149063450|gb|EDM13773.1| similar to ATP-dependent RNA-helicase (predicted) [Rattus
norvegicus]
Length = 297
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 240 VEYVVFDEADRLFEMGF 256
>gi|301609527|ref|XP_002934380.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Xenopus (Silurana)
tropicalis]
Length = 847
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ +EM LKL +
Sbjct: 158 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRT 217
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 218 VEYVVFDEADRLFEMGF 234
>gi|71999644|ref|NP_741348.2| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
gi|351051383|emb|CCD74205.1| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
Length = 825
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKELG+FT L+ CL+GGD ++ QF+ +H +PDI++ATPGR LH++VEM+L+LS
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY 167
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 168 VQYVVFDEADRLFEMGF 184
>gi|71999646|ref|NP_741347.2| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
gi|351051384|emb|CCD74206.1| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
Length = 871
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKELG+FT L+ CL+GGD ++ QF+ +H +PDI++ATPGR LH++VEM+L+LS
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY 167
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 168 VQYVVFDEADRLFEMGF 184
>gi|441629962|ref|XP_003274471.2| PREDICTED: ATP-dependent RNA helicase DDX54 [Nomascus leucogenys]
Length = 862
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PD ++ATPGR +H+ VEM LKL S
Sbjct: 165 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDTIIATPGRLVHVAVEMNLKLQS 224
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 225 VEYVVFDEADRLFEMGFAEQLQ 246
>gi|256074321|ref|XP_002573474.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228911|emb|CCD75082.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 829
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT F KELGKFT L++T +LGGD M+ QFA LH SPDI++ATPGRFLH+++EM L L S
Sbjct: 114 QTLNFTKELGKFTPLKATIILGGDKMEEQFAALHKSPDIIIATPGRFLHVLMEMNLSLKS 173
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDE DRLFE+GF
Sbjct: 174 IEYVVFDEGDRLFELGF 190
>gi|410976686|ref|XP_003994747.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Felis catus]
Length = 866
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD +++QFA LH +PD+++ATPGR +H+ VEM LKL S
Sbjct: 161 QTMKFTKELGKFTGLRTALILGGDKIEDQFAALHENPDVIIATPGRLVHVAVEMNLKLQS 220
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 221 VEYVVFDEADRLFEMGFAEQLQ 242
>gi|324503749|gb|ADY41623.1| ATP-dependent RNA helicase DDX54 [Ascaris suum]
Length = 799
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFKF KELG+FT L+ L+GGDS++ QF +H PDI++ATPGR LH+++EM L+L++
Sbjct: 122 QTFKFTKELGRFTGLRCAALVGGDSIEEQFGAIHEKPDIIIATPGRLLHLIIEMNLRLTT 181
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 182 VQYLVFDEADRLFEMGF 198
>gi|89269500|emb|CAJ82782.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus (Silurana)
tropicalis]
Length = 437
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ +EM LKL +
Sbjct: 158 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRT 217
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 218 VEYVVFDEADRLFEMGF 234
>gi|327282682|ref|XP_003226071.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Anolis
carolinensis]
Length = 840
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELG+F L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM+LKL S
Sbjct: 148 QTLKFTKELGRFAGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMKLKLHS 207
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 208 VEYVVFDEADRLFEMGF 224
>gi|226468478|emb|CAX69916.1| hypotherical protein [Schistosoma japonicum]
Length = 259
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT F KELG++T L++T +LGGD M++QFA LH+SPDI++ATPGRFLHI++EM L L +
Sbjct: 114 QTLNFTKELGRYTPLKATVILGGDKMEDQFAALHSSPDIIIATPGRFLHILMEMNLSLKT 173
Query: 77 IQYVVFDEADRLFEMGFDVEQQS 99
I+YVVFDE DRLFE+GF EQ S
Sbjct: 174 IEYVVFDEGDRLFELGF-AEQLS 195
>gi|341892664|gb|EGT48599.1| hypothetical protein CAEBREN_09605 [Caenorhabditis brenneri]
Length = 813
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKELG+FT L+ CL+GGD ++ QF+ +H +PDI++ATPGR LH++VEM+L+LS
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDVLEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSF 167
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 168 VQYVVFDEADRLFEMGF 184
>gi|348532949|ref|XP_003453968.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Oreochromis niloticus]
Length = 336
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ TPGR +H+V+EM LKL S
Sbjct: 161 QTMKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIGTPGRLMHVVMEMNLKLHS 220
Query: 77 IQYVVFDEADRLFEMGF 93
+ YVVFDEADRLFEMGF
Sbjct: 221 VAYVVFDEADRLFEMGF 237
>gi|268553635|ref|XP_002634804.1| Hypothetical protein CBG13909 [Caenorhabditis briggsae]
Length = 845
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKELG+FT L+ CL+GGD +++QF+ +H +PDI++ATPGR LH++VEM+L+L
Sbjct: 108 QTFKVVKELGRFTGLRCACLVGGDVLEDQFSTIHENPDILLATPGRLLHVIVEMDLRLQF 167
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 168 VQYVVFDEADRLFEMGF 184
>gi|432885908|ref|XP_004074816.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Oryzias
latipes]
Length = 853
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A LI P + QT KF KELGKF L++ +LGGD M++QFA LH +PDI++ TP
Sbjct: 147 AGARALIMSPTRELALQTMKFTKELGKFAGLKTALILGGDRMEDQFAALHENPDIIIGTP 206
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GR +H+V EM LKL S++YVVFDEADRLFEMGF
Sbjct: 207 GRLMHVVKEMNLKLHSVEYVVFDEADRLFEMGF 239
>gi|432885906|ref|XP_004074815.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Oryzias
latipes]
Length = 852
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A LI P + QT KF KELGKF L++ +LGGD M++QFA LH +PDI++ TP
Sbjct: 146 AGARALIMSPTRELALQTMKFTKELGKFAGLKTALILGGDRMEDQFAALHENPDIIIGTP 205
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GR +H+V EM LKL S++YVVFDEADRLFEMGF
Sbjct: 206 GRLMHVVKEMNLKLHSVEYVVFDEADRLFEMGF 238
>gi|340384313|ref|XP_003390658.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Amphimedon
queenslandica]
Length = 708
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELG+FT L++ +LGGD +++QF+ +H +PDI++ATPGRFLH+++EM++KL
Sbjct: 72 QTMKFTKELGRFTGLRAAVILGGDRIEDQFSTMHENPDIIIATPGRFLHLLLEMDMKLLH 131
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 132 VEYVVFDEADRLFEMGF 148
>gi|340377875|ref|XP_003387454.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Amphimedon queenslandica]
Length = 1183
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELG+FT L++ +LGGD +++QF+ +H +PDI++ATPGRFLH+++EM++KL
Sbjct: 136 QTMKFTKELGRFTGLRAAVILGGDRIEDQFSTIHENPDIIIATPGRFLHLLLEMDMKLLH 195
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 196 VEYVVFDEADRLFEMGF 212
>gi|407926601|gb|EKG19568.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 913
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 68/77 (88%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS+++QFA ++++PDI++ATPGRFLH+ VEMEL LS+
Sbjct: 174 QTLKVVKELGRGTDLRTVLLVGGDSLEDQFADMNSNPDIIIATPGRFLHLKVEMELDLST 233
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 234 VRYVVFDEADRLFEMGF 250
>gi|449675652|ref|XP_002156296.2| PREDICTED: ATP-dependent RNA helicase DDX54-like [Hydra
magnipapillata]
Length = 802
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL-KLS 75
QT KF KELGKFT L+ +LGGDS++ QF+ LH +PDI++ATPGRFLH++VEM++ KL
Sbjct: 207 QTLKFAKELGKFTTLKFAIILGGDSLEEQFSALHQNPDIIIATPGRFLHLLVEMDIKKLE 266
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF V+
Sbjct: 267 FIEYVVFDEADRLFEMGFSVQ 287
>gi|302895429|ref|XP_003046595.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727522|gb|EEU40882.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 897
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+S L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 170 QTLKVVKEFGRGTDLKSVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 229
Query: 77 IQYVVFDEADRLFEMGF 93
IQYVVFDEADRLFEMGF
Sbjct: 230 IQYVVFDEADRLFEMGF 246
>gi|115762569|ref|XP_792708.2| PREDICTED: ATP-dependent RNA helicase DDX54-like
[Strongylocentrotus purpuratus]
Length = 889
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KEL ++T L+S +LGGD MD+QFA LH +PDI++AT GR LH++VEM+LKL
Sbjct: 158 QTLKFTKELARYTDLRSEVILGGDRMDDQFAALHENPDILIATRGRLLHVLVEMDLKLMQ 217
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 218 VEYVVFDEADRLFEMGF 234
>gi|119471856|ref|XP_001258230.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034063|sp|A1DNG2.1|DBP10_NEOFI RecName: Full=ATP-dependent RNA helicase dbp10
gi|119406382|gb|EAW16333.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 934
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QFA + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IRYVVFDEADRLFEMGF 251
>gi|171690518|ref|XP_001910184.1| hypothetical protein [Podospora anserina S mat+]
gi|170945207|emb|CAP71318.1| unnamed protein product [Podospora anserina S mat+]
Length = 924
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QFA++ +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKELGRGTDLKTILLVGGDSLEEQFAQMATNPDIVIATPGRFLHLKVEMNLNLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 233 IKYVVFDEADRLFEMGF 249
>gi|358366421|dbj|GAA83042.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 934
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 178 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMHLDLSS 237
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 238 IRYVVFDEADRLFEMGF 254
>gi|367045536|ref|XP_003653148.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
gi|347000410|gb|AEO66812.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
Length = 938
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 185 QTLKVVKELGKGTDLRTVLLVGGDSLEEQFGLMAANPDIVIATPGRFLHLKVEMSLDLSS 244
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 245 IKYVVFDEADRLFEMGFATQ 264
>gi|67516603|ref|XP_658187.1| hypothetical protein AN0583.2 [Aspergillus nidulans FGSC A4]
gi|74681494|sp|Q5BFU7.1|DBP10_EMENI RecName: Full=ATP-dependent RNA helicase dbp10
gi|40747526|gb|EAA66682.1| hypothetical protein AN0583.2 [Aspergillus nidulans FGSC A4]
gi|259489152|tpe|CBF89188.1| TPA: ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFU7] [Aspergillus
nidulans FGSC A4]
Length = 936
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 176 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSS 235
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 236 IKYVVFDEADRLFEMGF 252
>gi|391865804|gb|EIT75083.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 928
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 174 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>gi|336263707|ref|XP_003346633.1| hypothetical protein SMAC_04806 [Sordaria macrospora k-hell]
gi|380090528|emb|CCC11825.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 934
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + A+PDI++ATPGRFLH+ VEM L LSS
Sbjct: 185 QTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMAANPDIIIATPGRFLHLKVEMSLSLSS 244
Query: 77 IQYVVFDEADRLFEMGFDVE 96
++YVVFDEADRLFEMGF E
Sbjct: 245 VKYVVFDEADRLFEMGFATE 264
>gi|169773155|ref|XP_001821046.1| ATP-dependent RNA helicase DBP10 [Aspergillus oryzae RIB40]
gi|238491104|ref|XP_002376789.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
gi|91208275|sp|Q2UHC1.1|DBP10_ASPOR RecName: Full=ATP-dependent RNA helicase dbp10
gi|83768907|dbj|BAE59044.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697202|gb|EED53543.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
Length = 929
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 174 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>gi|70992295|ref|XP_750996.1| ATP dependent RNA helicase (Dbp10) [Aspergillus fumigatus Af293]
gi|74697392|sp|Q8NJM2.1|DBP10_ASPFU RecName: Full=ATP-dependent RNA helicase dbp10
gi|21627815|emb|CAD37147.1| putative ATP-dependent RNA helicase [Aspergillus fumigatus]
gi|66848629|gb|EAL88958.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus fumigatus
Af293]
gi|159124566|gb|EDP49684.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus fumigatus
A1163]
Length = 869
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QFA + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 155 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLDLSS 214
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 215 IRYVVFDEADRLFEMGF 231
>gi|115397285|ref|XP_001214234.1| hypothetical protein ATEG_05056 [Aspergillus terreus NIH2624]
gi|121738336|sp|Q0CMM8.1|DBP10_ASPTN RecName: Full=ATP-dependent RNA helicase dbp10
gi|114192425|gb|EAU34125.1| hypothetical protein ATEG_05056 [Aspergillus terreus NIH2624]
Length = 928
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 174 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>gi|358384615|gb|EHK22212.1| hypothetical protein TRIVIDRAFT_209061 [Trichoderma virens Gv29-8]
Length = 897
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 172 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFGFMSANPDIVIATPGRFLHLKVEMGLDLSS 231
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 232 IKYVVFDEADRLFEMGFATQ 251
>gi|340521482|gb|EGR51716.1| predicted protein [Trichoderma reesei QM6a]
Length = 914
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 172 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFGFMSANPDIVIATPGRFLHLKVEMGLDLSS 231
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 232 IKYVVFDEADRLFEMGFATQ 251
>gi|255956777|ref|XP_002569141.1| Pc21g21690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590852|emb|CAP97066.1| Pc21g21690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 913
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+GK T L S L+GGDS+++QF + ++PDI++ATPGRFLH+ VEM++ LSS
Sbjct: 170 QTMKVVKEMGKGTNLTSVLLIGGDSLEDQFGMMASNPDIIIATPGRFLHLKVEMDMDLSS 229
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 230 IKYVVFDEADRLFEMGF 246
>gi|116196072|ref|XP_001223848.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
gi|118575168|sp|Q2H0R2.1|DBP10_CHAGB RecName: Full=ATP-dependent RNA helicase DBP10
gi|88180547|gb|EAQ88015.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
Length = 762
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF + A+PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSS 230
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 231 VRYVVFDEADRLFEMGF 247
>gi|358393875|gb|EHK43276.1| hypothetical protein TRIATDRAFT_32758 [Trichoderma atroviride IMI
206040]
Length = 903
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 169 QTLKVVKELGRGTDLKAVLLVGGDSLEEQFGFMSANPDIVIATPGRFLHLKVEMNLDLSS 228
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 229 IKYVVFDEADRLFEMGFATQ 248
>gi|350629908|gb|EHA18281.1| hypothetical protein ASPNIDRAFT_38116 [Aspergillus niger ATCC 1015]
Length = 932
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IRYVVFDEADRLFEMGF 251
>gi|145240463|ref|XP_001392878.1| ATP-dependent RNA helicase DBP10 [Aspergillus niger CBS 513.88]
gi|134034062|sp|A2QRY2.1|DBP10_ASPNC RecName: Full=ATP-dependent RNA helicase dbp10
gi|134077396|emb|CAK40010.1| unnamed protein product [Aspergillus niger]
Length = 932
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IRYVVFDEADRLFEMGF 251
>gi|440803241|gb|ELR24149.1| ATPdependent RNA helicase ddx54, putative [Acanthamoeba castellanii
str. Neff]
Length = 792
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELG FT L+ CL+GGD+M++QF++L +PDI++ATPGR LH ++E+E+ L S
Sbjct: 51 QTLKFCKELGHFTDLRYCCLIGGDNMEDQFSQLTHNPDIMIATPGRLLHHLLEVEMSLKS 110
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 111 VQYVVFDEADRLFEMGF 127
>gi|320163598|gb|EFW40497.1| ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1198
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT KF +L FT L++ ++GG+S++ QFA +H +PDIV+ATPGRFLH+V+EM L+
Sbjct: 339 LAMQTHKFCNDLSSFTNLRTRLIVGGESLEQQFAAMHENPDIVIATPGRFLHVVMEMNLR 398
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L ++QYVVFDEADRLFEMGF EQ S
Sbjct: 399 LQAVQYVVFDEADRLFEMGF-AEQLS 423
>gi|346977175|gb|EGY20627.1| ATP-dependent RNA helicase DBP10 [Verticillium dahliae VdLs.17]
Length = 899
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + VK+ K T L++ ++GGDSMD QF+ L A+PDI++ATPGRFLH+ VEM L LSS
Sbjct: 172 QTLRVVKDFNKGTDLKAALVVGGDSMDEQFSLLSANPDIIIATPGRFLHLKVEMSLNLSS 231
Query: 77 IQYVVFDEADRLFEMGF 93
IQYVVFDEADRLFEMGF
Sbjct: 232 IQYVVFDEADRLFEMGF 248
>gi|302406797|ref|XP_003001234.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
gi|261359741|gb|EEY22169.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
Length = 902
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + VK+ K T L++ ++GGDSMD QF+ L A+PDI++ATPGRFLH+ VEM L LSS
Sbjct: 172 QTLRVVKDFNKGTDLKAALVVGGDSMDEQFSLLSANPDIIIATPGRFLHLKVEMSLNLSS 231
Query: 77 IQYVVFDEADRLFEMGF 93
IQYVVFDEADRLFEMGF
Sbjct: 232 IQYVVFDEADRLFEMGF 248
>gi|391345925|ref|XP_003747233.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Metaseiulus
occidentalis]
Length = 805
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+S +LGGDS+D+QFA +H +PDI++ TPGR LH+V+EM L L
Sbjct: 142 QTHKFCKELGKFTDLRSVVILGGDSLDDQFAAMHENPDIIIGTPGRLLHLVMEMNLNLRM 201
Query: 77 IQYVVFDEADRLFEMGF 93
I+ VVFDEADRLFEMG
Sbjct: 202 IEIVVFDEADRLFEMGL 218
>gi|425777534|gb|EKV15702.1| ATP dependent RNA helicase (Dbp10), putative [Penicillium digitatum
Pd1]
gi|425779558|gb|EKV17605.1| ATP dependent RNA helicase (Dbp10), putative [Penicillium digitatum
PHI26]
Length = 912
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+GK T L S L+GGDS+++QF + +PDI++ATPGRFLH+ VEM++ LSS
Sbjct: 169 QTLKVVKEMGKGTNLTSVLLIGGDSLEDQFGMMANNPDIIIATPGRFLHLKVEMDMDLSS 228
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 229 IKYVVFDEADRLFEMGF 245
>gi|402082831|gb|EJT77849.1| ATP-dependent RNA helicase DBP10 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 951
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS+++QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGKGTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSS 234
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 235 IRYVVFDEADRLFEMGFATQ 254
>gi|325094395|gb|EGC47705.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus H88]
Length = 941
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 231 IRYVVFDEADRLFEMGFATQ 250
>gi|240275043|gb|EER38558.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus H143]
Length = 941
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 231 IRYVVFDEADRLFEMGFATQ 250
>gi|154286484|ref|XP_001544037.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|160380603|sp|A6QUM7.1|DBP10_AJECN RecName: Full=ATP-dependent RNA helicase DBP10
gi|150407678|gb|EDN03219.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 900
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 231 IRYVVFDEADRLFEMGFATQ 250
>gi|225558604|gb|EEH06888.1| ATP-dependent RNA helicase DBP10 [Ajellomyces capsulatus G186AR]
Length = 940
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSS 232
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 233 IRYVVFDEADRLFEMGFATQ 252
>gi|336470872|gb|EGO59033.1| hypothetical protein NEUTE1DRAFT_60019 [Neurospora tetrasperma FGSC
2508]
gi|350291940|gb|EGZ73135.1| ATP-dependent RNA helicase dbp-10 [Neurospora tetrasperma FGSC
2509]
Length = 934
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L L+S
Sbjct: 184 QTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLAS 243
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF E
Sbjct: 244 IKYVVFDEADRLFEMGFATE 263
>gi|85107031|ref|XP_962298.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
gi|74696531|sp|Q7S9J4.1|DBP10_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-10
gi|28923900|gb|EAA33062.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
Length = 934
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L L+S
Sbjct: 184 QTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLAS 243
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF E
Sbjct: 244 IKYVVFDEADRLFEMGFATE 263
>gi|340960309|gb|EGS21490.1| hypothetical protein CTHT_0033480 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 924
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMATNPDIIIATPGRFLHLKVEMSLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IKYVVFDEADRLFEMGF 251
>gi|261193383|ref|XP_002623097.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis
SLH14081]
gi|239588702|gb|EEQ71345.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis
SLH14081]
Length = 945
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 9 LISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVV 68
L S + QT K VKELG+ T L+S L+GGDS++ QF + +PDI++ATPGRFLH+ V
Sbjct: 163 LPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMAGNPDIIIATPGRFLHLKV 222
Query: 69 EMELKLSSIQYVVFDEADRLFEMGF 93
EM L LSSI+YVVFDEADRLFEMGF
Sbjct: 223 EMSLDLSSIRYVVFDEADRLFEMGF 247
>gi|327353326|gb|EGE82183.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis ATCC
18188]
Length = 945
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMAGNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 231 IRYVVFDEADRLFEMGF 247
>gi|239613976|gb|EEQ90963.1| ATP-dependent RNA helicase DBP10 [Ajellomyces dermatitidis ER-3]
Length = 945
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMAGNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 231 IRYVVFDEADRLFEMGF 247
>gi|320593114|gb|EFX05523.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 956
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF + ++PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 194 QTLKVVKELGKGTDLKTILLVGGDSLEEQFGLVASNPDIVIATPGRFLHLKVEMSLDLSS 253
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 254 VRYVVFDEADRLFEMGF 270
>gi|32967636|gb|AAH55026.1| Ddx54 protein, partial [Mus musculus]
Length = 690
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/76 (65%), Positives = 63/76 (82%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVF 82
KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S++YVVF
Sbjct: 2 KELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVF 61
Query: 83 DEADRLFEMGFDVEQQ 98
DEADRLFEMGF + Q
Sbjct: 62 DEADRLFEMGFAEQLQ 77
>gi|242803555|ref|XP_002484198.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces
stipitatus ATCC 10500]
gi|218717543|gb|EED16964.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces
stipitatus ATCC 10500]
Length = 945
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 181 QTLKVVKELGRGTDLKAVLLVGGDSLEEQFSLMVGNPDIVIATPGRFLHLKVEMNLDLSS 240
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 241 IKYVVFDEADRLFEMGF 257
>gi|452838537|gb|EME40477.1| hypothetical protein DOTSEDRAFT_90700 [Dothistroma septosporum
NZE10]
Length = 1010
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 67/77 (87%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+GK T L++T L+GGDS+++QF+ + ++PDI++ATPGRF H+ VEM L+LSS
Sbjct: 266 QTLKVVKEMGKGTDLRTTLLVGGDSLEDQFSSMASNPDIIIATPGRFEHLKVEMGLELSS 325
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 326 VKYVVFDEADRLFEMGF 342
>gi|440472202|gb|ELQ41079.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae Y34]
gi|440478179|gb|ELQ59033.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae P131]
Length = 880
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 64/80 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE GK T L++ L+GGDS+++QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSS 234
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 235 IKYVVFDEADRLFEMGFATQ 254
>gi|389644026|ref|XP_003719645.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
gi|152013475|sp|A4R5B8.1|DBP10_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP10
gi|351639414|gb|EHA47278.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
Length = 914
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 64/80 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE GK T L++ L+GGDS+++QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSS 234
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 235 IKYVVFDEADRLFEMGFATQ 254
>gi|367022384|ref|XP_003660477.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
gi|347007744|gb|AEO55232.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
Length = 926
Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 64/80 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 176 QTLKVVKELGRGTDLKTVLLVGGDSLEEQFGLMATNPDIIIATPGRFLHLKVEMSLDLSS 235
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 236 IRYVVFDEADRLFEMGFATQ 255
>gi|212539832|ref|XP_002150071.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces marneffei
ATCC 18224]
gi|210067370|gb|EEA21462.1| ATP dependent RNA helicase (Dbp10), putative [Talaromyces marneffei
ATCC 18224]
Length = 948
Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 181 QTLKVVKELGRGTDLKAVLLVGGDSLEEQFGLMVGNPDIVIATPGRFLHLKVEMNLDLSS 240
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 241 IKYVVFDEADRLFEMGF 257
>gi|400596455|gb|EJP64229.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 895
Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKEL K T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM+L +SS
Sbjct: 170 QTLKVVKELSKGTDLKAVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMKLDISS 229
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 230 IKYVVFDEADRLFEMGF 246
>gi|295667653|ref|XP_002794376.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286482|gb|EEH42048.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 905
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFEYMSGNPDIIIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 227 IRYVVFDEADRLFEMGFSAQ 246
>gi|379699004|ref|NP_001243975.1| ATP-dependent RNA helicase DDX54-like protein [Bombyx mori]
gi|373882595|gb|AEY78647.1| ATP-dependent RNA helicase DDX54-like protein [Bombyx mori]
Length = 605
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLH-ASPDIVVATP 60
N+ LI P + QT +FV+ELGKFT L S +LGG+S++ QF + +SPDIVVATP
Sbjct: 111 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATP 170
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
GRFLHI +EM LKL +I+ VVFDEADRLFE+GF + Q C
Sbjct: 171 GRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC 211
>gi|346325171|gb|EGX94768.1| dead box ATP-dependent rna helicase [Cordyceps militaris CM01]
Length = 891
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKEL + T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 168 QTLKVVKELSRGTDLKAVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMSLNLSS 227
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 228 IKYVVFDEADRLFEMGF 244
>gi|357630995|gb|EHJ78746.1| hypothetical protein KGM_20929 [Danaus plexippus]
Length = 706
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLH-ASPDIVVATP 60
N+ LI P + QT +FV+ELGKFT L S +LGG+S++ QF + +SPDIVVATP
Sbjct: 70 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFGVMSGSSPDIVVATP 129
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
GRFLHI +EM LKL +I+ VVFDEADRLFE+GF + Q
Sbjct: 130 GRFLHICIEMSLKLDNIKIVVFDEADRLFELGFGEQLQ 167
>gi|226291932|gb|EEH47360.1| ATP-dependent RNA helicase DBP10 [Paracoccidioides brasiliensis
Pb18]
Length = 895
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFEYMSGNPDIIIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 227 IRYVVFDEADRLFEMGFSAQ 246
>gi|260942725|ref|XP_002615661.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
gi|238850951|gb|EEQ40415.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
Length = 955
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKE K T L+S L+GGDS++ QF+ + ++PDI+VATPGRFLH+ VEM+L LS+
Sbjct: 203 QTFKQVKEFSKGTDLRSVVLIGGDSLEEQFSSMMSNPDIIVATPGRFLHLQVEMQLDLST 262
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 263 VEYIVFDEADRLFEMGF 279
>gi|378726362|gb|EHY52821.1| ATP-dependent RNA helicase dbp10 [Exophiala dermatitidis
NIH/UT8656]
Length = 931
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + VKELGK T L+S L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLQVVKELGKGTDLRSILLVGGDSLEQQFSAMANNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 231 MKYVVFDEADRLFEMGF 247
>gi|320036334|gb|EFW18273.1| ATP-dependent RNA helicase DBP10 [Coccidioides posadasii str.
Silveira]
Length = 927
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 166 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSS 225
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 226 IKYVVFDEADRLFEMGF 242
>gi|303313411|ref|XP_003066717.1| ATP-dependent RNA helicase DBP10, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106379|gb|EER24572.1| ATP-dependent RNA helicase DBP10, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 936
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IKYVVFDEADRLFEMGF 251
>gi|258573243|ref|XP_002540803.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901069|gb|EEP75470.1| predicted protein [Uncinocarpus reesii 1704]
Length = 937
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IKYVVFDEADRLFEMGF 251
>gi|119191696|ref|XP_001246454.1| hypothetical protein CIMG_00225 [Coccidioides immitis RS]
gi|118575169|sp|Q1EB38.1|DBP10_COCIM RecName: Full=ATP-dependent RNA helicase DBP10
gi|392864317|gb|EAS34854.2| ATP-dependent RNA helicase DBP10 [Coccidioides immitis RS]
Length = 927
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 166 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSS 225
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 226 IKYVVFDEADRLFEMGF 242
>gi|225680138|gb|EEH18422.1| ATP-dependent RNA helicase dbp10 [Paracoccidioides brasiliensis
Pb03]
Length = 934
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFEYMSGNPDIIIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 227 IRYVVFDEADRLFEMGFSAQ 246
>gi|380486597|emb|CCF38600.1| ATP-dependent RNA helicase DBP10 [Colletotrichum higginsianum]
Length = 853
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE K T L+ L+GGDSM++QF+ + ++PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 126 QTLKVVKEFSKGTDLKCILLVGGDSMEDQFSMMSSNPDIVIATPGRFLHLKVEMGLDLSS 185
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 186 IKYVVFDEADRLFEMGF 202
>gi|449477372|ref|XP_004176637.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Taeniopygia guttata]
Length = 849
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PD+ V T GR +H+ VEM+ KL +
Sbjct: 146 QTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDMXVGTTGRLVHVAVEMKQKLHT 205
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 206 VEYVVFDEADRLFEMGFAEQLQ 227
>gi|296422662|ref|XP_002840878.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637104|emb|CAZ85069.1| unnamed protein product [Tuber melanosporum]
Length = 838
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 62/80 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+ L+GGDS++ QF + +PDIV+ATPGRF+H+ VEMEL L S
Sbjct: 174 QTMKVVKEFGRGTDLKVVLLVGGDSLEEQFGYMAGNPDIVIATPGRFMHLKVEMELDLRS 233
Query: 77 IQYVVFDEADRLFEMGFDVE 96
+QYVVFDEADRLFEMGF +
Sbjct: 234 VQYVVFDEADRLFEMGFSAQ 253
>gi|310795114|gb|EFQ30575.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 903
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE K T L+ L+GGDSM++QF+ + ++PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKEFSKGTDLKCILLVGGDSMEDQFSMMASNPDIVIATPGRFLHLKVEMGLDLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 233 IKYVVFDEADRLFEMGF 249
>gi|452978780|gb|EME78543.1| hypothetical protein MYCFIDRAFT_10719, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 855
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 66/77 (85%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+G+ T L++T L+GGDS+++QF + ++PDI++ATPGRF H+ VEM L+LSS
Sbjct: 114 QTLKVVKEMGRGTDLRTTLLVGGDSLEDQFGSMASNPDIIIATPGRFEHLKVEMGLELSS 173
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 174 VKYVVFDEADRLFEMGF 190
>gi|312084924|ref|XP_003144474.1| DEAD/DEAH box helicase [Loa loa]
gi|307760364|gb|EFO19598.1| DEAD/DEAH box helicase [Loa loa]
Length = 783
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTF VKELG+FT L+ L+GGD ++ QF +H PDIVVATPGR LH++VEM+ +LS+
Sbjct: 115 QTFIVVKELGRFTGLRCAVLVGGDRIEEQFQAVHEKPDIVVATPGRLLHVIVEMDFRLSA 174
Query: 77 IQYVVFDEADRLFEMGF 93
+Q +VFDEADRLFEMGF
Sbjct: 175 VQIIVFDEADRLFEMGF 191
>gi|322700977|gb|EFY92729.1| ATP-dependent RNA helicase dbp10 [Metarhizium acridum CQMa 102]
Length = 894
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 168 QTLKVVKEFARGTDLKAVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 227
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 228 IKYVVFDEADRLFEMGFATQ 247
>gi|189189808|ref|XP_001931243.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972849|gb|EDU40348.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 892
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 162 QTLKVVKELGRGTDLRTILLVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 222 VRYIVFDEADRLFEMGF 238
>gi|330947853|ref|XP_003306985.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
gi|311315219|gb|EFQ84923.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
Length = 893
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 162 QTLKVVKELGRGTDLRTILLVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 222 VRYIVFDEADRLFEMGF 238
>gi|451999037|gb|EMD91500.1| hypothetical protein COCHEDRAFT_1136109 [Cochliobolus
heterostrophus C5]
Length = 891
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 162 QTLKVVKELGRGTDLRTILLVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 222 VKYIVFDEADRLFEMGF 238
>gi|402593242|gb|EJW87169.1| DEAD/DEAH box helicase, partial [Wuchereria bancrofti]
Length = 746
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QTF VKELG+FT L+ L+GGD ++ QF +H PDIV+ATPGR
Sbjct: 65 IRALIIEPTRELAMQTFTVVKELGRFTGLRCAVLVGGDRIEEQFQAVHEKPDIVIATPGR 124
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
LH++VEM+ +LS++Q +VFDEADRLFEMGF
Sbjct: 125 LLHVIVEMDFRLSAVQVIVFDEADRLFEMGF 155
>gi|121699888|ref|XP_001268209.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034061|sp|A1CTZ6.1|DBP10_ASPCL RecName: Full=ATP-dependent RNA helicase dbp10
gi|119396351|gb|EAW06783.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 935
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L L S
Sbjct: 174 QTLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>gi|170590083|ref|XP_001899802.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158592721|gb|EDP31318.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 782
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QTF VKELG+FT L+ L+GGD ++ QF +H PDIV+ATPGR
Sbjct: 101 IRALIIEPTRELAMQTFTVVKELGRFTGLRCAVLVGGDRIEEQFQTVHEKPDIVIATPGR 160
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
LH++VEM+ +LS++Q +VFDEADRLFEMGF
Sbjct: 161 LLHVIVEMDFRLSAVQVIVFDEADRLFEMGF 191
>gi|160380704|sp|A7ESL7.2|DBP10_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp10
Length = 920
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMSLDLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 233 MKYVVFDEADRLFEMGF 249
>gi|156049231|ref|XP_001590582.1| hypothetical protein SS1G_08322 [Sclerotinia sclerotiorum 1980]
gi|154692721|gb|EDN92459.1| hypothetical protein SS1G_08322 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 828
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 81 QTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMSLDLSS 140
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 141 MKYVVFDEADRLFEMGF 157
>gi|396463068|ref|XP_003836145.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
gi|312212697|emb|CBX92780.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
Length = 894
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 163 QTLKVVKELGRGTDLRTILLVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSS 222
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 223 VKYIVFDEADRLFEMGF 239
>gi|294658755|ref|XP_461087.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
gi|218512019|sp|Q6BL34.2|DBP10_DEBHA RecName: Full=ATP-dependent RNA helicase DBP10
gi|202953360|emb|CAG89469.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
Length = 932
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTFK VKE K T L+S L+GGDS++ QF+ + +PD++VATPGRFLH+ VEMEL+
Sbjct: 179 LASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSMMTNPDVIVATPGRFLHLKVEMELE 238
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++Y+VFDEADRLFEMGF
Sbjct: 239 LKTVEYIVFDEADRLFEMGF 258
>gi|322706702|gb|EFY98282.1| ATP-dependent RNA helicase dbp10 [Metarhizium anisopliae ARSEF 23]
Length = 892
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L++ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 168 QTLKVVKEFARGTDLKAILLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 227
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 228 IKYVVFDEADRLFEMGFATQ 247
>gi|344295386|ref|XP_003419393.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Loxodonta africana]
Length = 926
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 314 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHKNPDIIIATPGRLVHVAVEMSLKLQS 373
Query: 77 IQYVVFDEADRL 88
++YVVFDEADRL
Sbjct: 374 MEYVVFDEADRL 385
>gi|342884574|gb|EGU84781.1| hypothetical protein FOXB_04676 [Fusarium oxysporum Fo5176]
Length = 897
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 168 QTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGSMAANPDIVIATPGRFLHLKVEMSLDLSS 227
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 228 IKYVVFDEADRLFEMGF 244
>gi|326477276|gb|EGE01286.1| ATP-dependent RNA helicase DBP10 [Trichophyton equinum CBS 127.97]
Length = 941
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 178 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMASNPDIIIATPGRFLHLKVEMNLDLSS 237
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 238 IRYAVFDEADRLFEMGF 254
>gi|326473025|gb|EGD97034.1| ATP-dependent RNA helicase DBP10 [Trichophyton tonsurans CBS
112818]
Length = 941
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 178 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMASNPDIIIATPGRFLHLKVEMNLDLSS 237
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 238 IRYAVFDEADRLFEMGF 254
>gi|327304757|ref|XP_003237070.1| ATP-dependent RNA helicase DBP10 [Trichophyton rubrum CBS 118892]
gi|326460068|gb|EGD85521.1| ATP-dependent RNA helicase DBP10 [Trichophyton rubrum CBS 118892]
Length = 940
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 177 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMASNPDIIIATPGRFLHLKVEMNLDLSS 236
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 237 IRYAVFDEADRLFEMGF 253
>gi|302665674|ref|XP_003024446.1| hypothetical protein TRV_01409 [Trichophyton verrucosum HKI 0517]
gi|291188499|gb|EFE43835.1| hypothetical protein TRV_01409 [Trichophyton verrucosum HKI 0517]
Length = 940
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 177 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMASNPDIIIATPGRFLHLKVEMNLDLSS 236
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 237 IRYAVFDEADRLFEMGF 253
>gi|302506487|ref|XP_003015200.1| hypothetical protein ARB_06323 [Arthroderma benhamiae CBS 112371]
gi|291178772|gb|EFE34560.1| hypothetical protein ARB_06323 [Arthroderma benhamiae CBS 112371]
Length = 940
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 177 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMASNPDIIIATPGRFLHLKVEMNLDLSS 236
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 237 IRYAVFDEADRLFEMGF 253
>gi|345570653|gb|EGX53474.1| hypothetical protein AOL_s00006g340 [Arthrobotrys oligospora ATCC
24927]
Length = 946
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VK++ + T L++ L+GGDS+++QF+ + +PDI++ATPGRFLH+ VEMEL LSS
Sbjct: 187 QTLKVVKDISRGTDLKAILLVGGDSLEDQFSMMTTNPDIIIATPGRFLHLKVEMELDLSS 246
Query: 77 IQYVVFDEADRLFEMGF 93
+QYVVFDEADRLFEMGF
Sbjct: 247 MQYVVFDEADRLFEMGF 263
>gi|315045858|ref|XP_003172304.1| ATP-dependent RNA helicase DBP10 [Arthroderma gypseum CBS 118893]
gi|311342690|gb|EFR01893.1| ATP-dependent RNA helicase DBP10 [Arthroderma gypseum CBS 118893]
Length = 940
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 177 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMSLDLSS 236
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y VFDEADRLFEMGF
Sbjct: 237 IRYAVFDEADRLFEMGF 253
>gi|408398412|gb|EKJ77543.1| hypothetical protein FPSE_02293 [Fusarium pseudograminearum CS3096]
Length = 897
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 227 IKYVVFDEADRLFEMGF 243
>gi|46136501|ref|XP_389942.1| hypothetical protein FG09766.1 [Gibberella zeae PH-1]
gi|91206536|sp|Q4HZ42.1|DBP10_GIBZE RecName: Full=ATP-dependent RNA helicase DBP10
Length = 897
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 227 IKYVVFDEADRLFEMGF 243
>gi|451848327|gb|EMD61633.1| hypothetical protein COCSADRAFT_148565 [Cochliobolus sativus
ND90Pr]
Length = 891
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + VKELG+ T L++ L+GGDS++ QF+ + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 162 QTLRVVKELGRGTDLRTILLVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 222 VKYIVFDEADRLFEMGF 238
>gi|384495385|gb|EIE85876.1| hypothetical protein RO3G_10586 [Rhizopus delemar RA 99-880]
Length = 958
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/80 (60%), Positives = 64/80 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K KEL K+T L+S C++GGDS+D QF + ++PDI++ATPGR LH+ VEM L L +
Sbjct: 244 QTQKVCKELMKYTDLRSCCIVGGDSLDEQFEMIASNPDILIATPGRLLHLAVEMNLDLRT 303
Query: 77 IQYVVFDEADRLFEMGFDVE 96
++YVVFDEADRLFEMGF ++
Sbjct: 304 VEYVVFDEADRLFEMGFAIQ 323
>gi|118575170|sp|Q0UMB6.1|DBP10_PHANO RecName: Full=ATP-dependent RNA helicase DBP10
Length = 878
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L++ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 163 QTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHLKVEMGLDLSS 222
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 223 VQYIVFDEADRLFEMGF 239
>gi|398392503|ref|XP_003849711.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
gi|339469588|gb|EGP84687.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
Length = 833
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+ + T L++T L+GGDS++ QF+ + ++PDI++ATPGRF H+ VEM L+LSS
Sbjct: 81 QTLKVVKEMSRGTDLRTTLLVGGDSLEEQFSSMASNPDIIIATPGRFEHLKVEMSLELSS 140
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 141 VKYVVFDEADRLFEMGF 157
>gi|449295671|gb|EMC91692.1| hypothetical protein BAUCODRAFT_301346 [Baudoinia compniacensis
UAMH 10762]
Length = 909
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 65/77 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VK+ G+ T L++T L+GGDS+++QF + ++PDI++ATPGRF H+ VEM L+LSS
Sbjct: 162 QTLKVVKDFGRGTDLRATLLVGGDSLEDQFGSIASNPDIIIATPGRFEHLKVEMGLELSS 221
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 222 VKYVVFDEADRLFEMGF 238
>gi|406604990|emb|CCH43589.1| hypothetical protein BN7_3142 [Wickerhamomyces ciferrii]
Length = 958
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/78 (60%), Positives = 66/78 (84%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K +KE + T L+S L+GGDS+++QF+ + ++PDIV+ATPGRFLH+ VEM+L L +
Sbjct: 200 QTYKVIKEFSRGTDLRSVLLIGGDSLEDQFSLMMSNPDIVIATPGRFLHLKVEMQLDLKT 259
Query: 77 IQYVVFDEADRLFEMGFD 94
++YVVFDEADRLFEMGF+
Sbjct: 260 VEYVVFDEADRLFEMGFE 277
>gi|169608063|ref|XP_001797451.1| hypothetical protein SNOG_07098 [Phaeosphaeria nodorum SN15]
gi|160701550|gb|EAT85749.2| hypothetical protein SNOG_07098 [Phaeosphaeria nodorum SN15]
Length = 798
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L++ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 163 QTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHLKVEMGLDLSS 222
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 223 VQYIVFDEADRLFEMGF 239
>gi|344301065|gb|EGW31377.1| ATP-dependent RNA helicase DBP10 [Spathaspora passalidarum NRRL
Y-27907]
Length = 918
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE G T LQ+T L+GGD+++ F+++ + PDI+V TPGRFLH+ VEM+ LS+
Sbjct: 186 QTYKQVKEFGHGTNLQTTVLIGGDTLEEDFSKMVSKPDIIVCTPGRFLHLKVEMDYDLST 245
Query: 77 IQYVVFDEADRLFEMGFDVE 96
IQY+VFDEADRLFEMGF ++
Sbjct: 246 IQYIVFDEADRLFEMGFAIQ 265
>gi|223590189|sp|A5DLR3.2|DBP10_PICGU RecName: Full=ATP-dependent RNA helicase DBP10
gi|190347777|gb|EDK40116.2| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKE K T L+S L+GGDS+++QF+ + +PDI+VATPGRFLH+ VEM L L +
Sbjct: 184 QTFKQVKEFTKGTDLRSIVLIGGDSLEDQFSSMMTNPDILVATPGRFLHLKVEMNLDLKT 243
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 244 VEYIVFDEADRLFEMGF 260
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
+N LI P + QT K VK+ K T L+S ++GG S++ QF+ L PDIVVATP
Sbjct: 138 SNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATP 197
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GRFLH+ VEM+L+LSSI+YVVFDEADRLFEMGF
Sbjct: 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGF 230
>gi|448102171|ref|XP_004199738.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359381160|emb|CCE81619.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 939
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTF+ VKE K T L++ L+GGDS++ F+ L +PDIVVATPGRFLH+ VEM+L LS+
Sbjct: 192 QTFRQVKEFSKGTDLRTVVLVGGDSLEEHFSSLMNNPDIVVATPGRFLHLKVEMQLDLST 251
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 252 MEYVVFDEADRLFEMGF 268
>gi|428163077|gb|EKX32169.1| hypothetical protein GUITHDRAFT_121663 [Guillardia theta CCMP2712]
Length = 914
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 62/80 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGK+T L+ L+GGDSM++QFA L +PD+V+ATPGR LH + E+ L L S
Sbjct: 235 QTLKFGKELGKYTGLRMALLVGGDSMEDQFAALAHNPDVVIATPGRLLHHLEEVGLTLQS 294
Query: 77 IQYVVFDEADRLFEMGFDVE 96
+QY+VFDE DRLFEMGF E
Sbjct: 295 VQYIVFDECDRLFEMGFAAE 314
>gi|406865244|gb|EKD18286.1| putative ATP-dependent RNA helicase dbp10 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1090
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 60/77 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L+ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 298 QTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGFMAGNPDIVIATPGRFLHLQVEMSLDLSS 357
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 358 VKYVVFDEADRLFEMGF 374
>gi|154299696|ref|XP_001550266.1| hypothetical protein BC1G_11474 [Botryotinia fuckeliana B05.10]
Length = 307
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAGNPDIVIATPGRFLHLKVEMSLDLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 233 MKYVVFDEADRLFEMGF 249
>gi|448098288|ref|XP_004198888.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359380310|emb|CCE82551.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTF+ VKE + T L++ L+GGDS+++ F+ L +PDIVVATPGRFLH+ VEM+L LS+
Sbjct: 212 QTFRQVKEFSRGTDLRTVVLVGGDSLEDHFSSLMNNPDIVVATPGRFLHLKVEMQLDLST 271
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 272 MEYVVFDEADRLFEMGF 288
>gi|146415030|ref|XP_001483485.1| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKE K T L+S L+GGDS+++QF + +PDI+VATPGRFLH+ VEM L L +
Sbjct: 184 QTFKQVKEFTKGTDLRSIVLIGGDSLEDQFLSMMTNPDILVATPGRFLHLKVEMNLDLKT 243
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 244 VEYIVFDEADRLFEMGF 260
>gi|254566739|ref|XP_002490480.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238030276|emb|CAY68199.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328350871|emb|CCA37271.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 1003
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTF+ KE + T L++ L+GGDSM++QF + ++PD+V+ATPGRFLH+ VEM L L S
Sbjct: 200 QTFRQFKEFSRGTNLRAMLLIGGDSMEDQFGAMMSNPDVVIATPGRFLHLKVEMSLDLKS 259
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVV+DEADRLFEMGF
Sbjct: 260 IEYVVYDEADRLFEMGF 276
>gi|339238715|ref|XP_003380912.1| ATP-dependent RNA helicase RhlE [Trichinella spiralis]
gi|316976123|gb|EFV59462.1| ATP-dependent RNA helicase RhlE [Trichinella spiralis]
Length = 182
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 17 QTFKFVKE-LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QTFKF+KE LGKFT L+++ ++GGDSM++QFA +H +PD+V+ATPGR LH++VEM L L
Sbjct: 111 QTFKFLKEVLGKFTGLRASVIIGGDSMEDQFAAIHENPDVVIATPGRLLHLIVEMNLSLK 170
Query: 76 SIQYVVFDEADR 87
S+ YVVFDEADR
Sbjct: 171 SVNYVVFDEADR 182
>gi|440637343|gb|ELR07262.1| ATP-dependent RNA helicase dbp10 [Geomyces destructans 20631-21]
Length = 928
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + VK+ G+ T L+ L+GGDS++ QF + ++PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLQVVKQFGRGTDLKCVLLVGGDSLEEQFGFMASNPDIVIATPGRFLHLKVEMGLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 235 MKYVVFDEADRLFEMGF 251
>gi|345314566|ref|XP_001514939.2| PREDICTED: ATP-dependent RNA helicase DDX54-like [Ornithorhynchus
anatinus]
Length = 416
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 58/72 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L+ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 235 QTGKFTKELGKFTGLKMALILGGDRMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQS 294
Query: 77 IQYVVFDEADRL 88
++YVVFDEAD L
Sbjct: 295 VEYVVFDEADSL 306
>gi|444315728|ref|XP_004178521.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
gi|387511561|emb|CCH59002.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
Length = 929
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/81 (58%), Positives = 64/81 (79%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I QT + KE K T+L+S L GGDS+++QF + ++PD+V+ATPGRFLH+ VEM+L
Sbjct: 187 IAIQTHRVFKEFSKNTELRSVLLTGGDSLEDQFGMMMSNPDVVIATPGRFLHLKVEMKLD 246
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L S++Y+VFDEADRLFEMGF+
Sbjct: 247 LKSVEYIVFDEADRLFEMGFE 267
>gi|254578362|ref|XP_002495167.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
gi|238938057|emb|CAR26234.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
Length = 979
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 62/83 (74%)
Query: 11 SFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
S I QT+K KE K + L+S L GGDS+++QF + ++PD+VVATPGRFLH+ VEM
Sbjct: 202 SREIAMQTYKVFKEFSKGSDLRSVLLTGGDSLEDQFGMMMSNPDVVVATPGRFLHLKVEM 261
Query: 71 ELKLSSIQYVVFDEADRLFEMGF 93
L L S++Y VFDEADRLFEMGF
Sbjct: 262 NLNLKSVEYAVFDEADRLFEMGF 284
>gi|430811574|emb|CCJ30960.1| unnamed protein product [Pneumocystis jirovecii]
Length = 906
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKEL K T L+ L+GG+S++ QF + +PDI+VATPGRFLH+ VEM+L L +
Sbjct: 449 QTFKVVKELKKGTNLKHILLVGGESLEEQFEIMSINPDIIVATPGRFLHLKVEMDLDLRT 508
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y+VFDEADRLFEMGF
Sbjct: 509 IEYIVFDEADRLFEMGF 525
>gi|430814638|emb|CCJ28161.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKEL K T L+ L+GG+S++ QF + +PDI+VATPGRFLH+ VEM+L L +
Sbjct: 315 QTFKVVKELKKGTNLKHILLVGGESLEEQFEIMSINPDIIVATPGRFLHLKVEMDLDLRT 374
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y+VFDEADRLFEMGF
Sbjct: 375 IEYIVFDEADRLFEMGF 391
>gi|302758696|ref|XP_002962771.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
gi|300169632|gb|EFJ36234.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
Length = 786
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTFKF KELG+ T L+ T L+GGDSM+ QF +L +PDI++ATPGR +H + E+E + L
Sbjct: 109 QTFKFCKELGRNTDLRITVLVGGDSMETQFEQLSKNPDILIATPGRLMHHLSEVEGMSLK 168
Query: 76 SIQYVVFDEADRLFEMGF 93
S++YVVFDEADRLFEMGF
Sbjct: 169 SVEYVVFDEADRLFEMGF 186
>gi|302758194|ref|XP_002962520.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
gi|300169381|gb|EFJ35983.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
Length = 821
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTFKF KELG+ T L+ T L+GGDSM+ QF +L +PDI++ATPGR +H + E+E + L
Sbjct: 138 QTFKFCKELGRNTDLRITVLVGGDSMETQFEQLSKNPDILIATPGRLMHHLSEVEGMSLK 197
Query: 76 SIQYVVFDEADRLFEMGF 93
S++YVVFDEADRLFEMGF
Sbjct: 198 SVEYVVFDEADRLFEMGF 215
>gi|401626375|gb|EJS44323.1| dbp10p [Saccharomyces arboricola H-6]
Length = 1001
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 62/80 (77%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ K T+L+S L GGDS++ QF+ + ++PD+++ATPGRFLH+ VEM L
Sbjct: 225 LAMQTFNVFKDFAKGTELRSVLLTGGDSLEEQFSMMMSNPDVIIATPGRFLHLKVEMNLD 284
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 285 LKSVEYVVFDEADRLFEMGF 304
>gi|448522708|ref|XP_003868758.1| Dbp10 protein [Candida orthopsilosis Co 90-125]
gi|380353098|emb|CCG25854.1| Dbp10 protein [Candida orthopsilosis]
Length = 912
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE + T LQS L+GGDS++ F ++ + PD++V TPGRFLH+ VEM+ LS+
Sbjct: 178 QTYKQVKEFSRGTDLQSIVLIGGDSLEEDFGKMVSKPDVIVCTPGRFLHLKVEMQYDLST 237
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 238 VQYIVFDEADRLFEMGF 254
>gi|453081414|gb|EMF09463.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 849
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE+GK T L++ ++GGD +++ F + A+PDI++ATPGRF H+ VEM L LSS
Sbjct: 81 QTLKVVKEMGKGTDLRTVLIVGGDGIEDNFGSMAANPDIIIATPGRFEHVKVEMGLDLSS 140
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 141 VKYMVFDEADRLFEMGF 157
>gi|354548000|emb|CCE44735.1| hypothetical protein CPAR2_405390 [Candida parapsilosis]
Length = 914
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 60/77 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE + T LQS L+GGDS++ F ++ PDI+V TPGRFLH+ VEM+ LS+
Sbjct: 176 QTYKQVKEFSRGTDLQSIVLIGGDSLEEDFGKMVTKPDIIVCTPGRFLHLKVEMQYDLST 235
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 236 VEYIVFDEADRLFEMGF 252
>gi|149241448|ref|XP_001526316.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013474|sp|A5DZT7.1|DBP10_LODEL RecName: Full=ATP-dependent RNA helicase DBP10
gi|146450439|gb|EDK44695.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T LQS L+GGDS++ F ++ PDI+V TPGRFLH+ VEM+ L S
Sbjct: 205 QTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMS 264
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 265 VQYIVFDEADRLFEMGF 281
>gi|207346902|gb|EDZ73254.1| YDL031Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 846
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 70 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 129
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 130 LKSVEYVVFDEADRLFEMGF 149
>gi|365766492|gb|EHN07988.1| Dbp10p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 899
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 123 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 182
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 183 LKSVEYVVFDEADRLFEMGF 202
>gi|1279685|emb|CAA96458.1| unknown [Saccharomyces cerevisiae]
gi|1431010|emb|CAA98590.1| DBP10 [Saccharomyces cerevisiae]
Length = 995
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>gi|344232323|gb|EGV64202.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 910
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T L+ L+GGDS+D+QF+ + +PDI++ATPGRF+H+ +EM+L L S
Sbjct: 173 QTYKQVKEFSHRTDLRIMLLVGGDSLDDQFSAMMTNPDIIIATPGRFMHLKIEMDLNLKS 232
Query: 77 IQYVVFDEADRLFEMGF 93
I+Y+VFDEADRLFE+GF
Sbjct: 233 IEYIVFDEADRLFELGF 249
>gi|241953401|ref|XP_002419422.1| ATP-dependent RNA helicase, putative; ribosome biogenesis protein,
putative [Candida dubliniensis CD36]
gi|223642762|emb|CAX43016.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 933
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T LQS L+GGDS++ F+++ PDI+V TPGRFLH+ VEM+ L +
Sbjct: 191 QTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYDLMT 250
Query: 77 IQYVVFDEADRLFEMGF 93
IQY+VFDEADRLFEMGF
Sbjct: 251 IQYIVFDEADRLFEMGF 267
>gi|213402583|ref|XP_002172064.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
gi|212000111|gb|EEB05771.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
Length = 854
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VK+ K T L++ ++GG+ ++ QF+ L PDI+VATPGRFLH+ VEM+L+L S
Sbjct: 150 QTMKVVKDFSKDTNLRTAVIVGGEGLEEQFSILTNKPDIIVATPGRFLHLKVEMKLELGS 209
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 210 IEYVVFDEADRLFEMGF 226
>gi|156846782|ref|XP_001646277.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160380605|sp|A7TGW7.1|DBP10_VANPO RecName: Full=ATP-dependent RNA helicase DBP10
gi|156116952|gb|EDO18419.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 977
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + KE K T L+S L GGDS+++QF+ + ++PD++VATPGRFLH+ VEM L L +
Sbjct: 206 QTHRVFKEFSKGTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATPGRFLHLKVEMSLDLKT 265
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 266 VEYVVFDEADRLFEMGF 282
>gi|259145212|emb|CAY78476.1| Dbp10p [Saccharomyces cerevisiae EC1118]
gi|349577043|dbj|GAA22212.1| K7_Dbp10p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 995
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>gi|330443505|ref|NP_010253.2| Dbp10p [Saccharomyces cerevisiae S288c]
gi|341940422|sp|Q12389.2|DBP10_YEAST RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|329138871|tpg|DAA11821.2| TPA: Dbp10p [Saccharomyces cerevisiae S288c]
gi|392300086|gb|EIW11177.1| Dbp10p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 995
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>gi|160380606|sp|A6ZXU0.1|DBP10_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|151941964|gb|EDN60320.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|190405046|gb|EDV08313.1| hypothetical protein SCRG_00534 [Saccharomyces cerevisiae RM11-1a]
gi|256269702|gb|EEU04973.1| Dbp10p [Saccharomyces cerevisiae JAY291]
Length = 995
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>gi|68465679|ref|XP_723201.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|68465972|ref|XP_723054.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|74680391|sp|Q5ANB2.1|DBP10_CANAL RecName: Full=ATP-dependent RNA helicase DBP10
gi|46445068|gb|EAL04339.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|46445224|gb|EAL04494.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|238880918|gb|EEQ44556.1| hypothetical protein CAWG_02828 [Candida albicans WO-1]
Length = 908
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T LQS L+GGDS++ F+++ PDI+V TPGRFLH+ VEM+ L +
Sbjct: 183 QTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYDLMT 242
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 243 VQYIVFDEADRLFEMGF 259
>gi|45190521|ref|NP_984775.1| AEL086Wp [Ashbya gossypii ATCC 10895]
gi|74693722|sp|Q757U8.1|DBP10_ASHGO RecName: Full=ATP-dependent RNA helicase DBP10
gi|44983463|gb|AAS52599.1| AEL086Wp [Ashbya gossypii ATCC 10895]
Length = 960
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 61/80 (76%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K KE K + L+S L GGD +++QF+ + ++PD+++ATPGRFLH+ VEM L
Sbjct: 202 LAMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRFLHLKVEMNLD 261
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L SI+YVVFDEADRLFEMGF
Sbjct: 262 LHSIEYVVFDEADRLFEMGF 281
>gi|374107994|gb|AEY96901.1| FAEL086Wp [Ashbya gossypii FDAG1]
Length = 960
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 62/83 (74%)
Query: 11 SFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
S + QT K KE K + L+S L GGD +++QF+ + ++PD+++ATPGRFLH+ VEM
Sbjct: 199 SRELAMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRFLHLKVEM 258
Query: 71 ELKLSSIQYVVFDEADRLFEMGF 93
L L SI+YVVFDEADRLFEMGF
Sbjct: 259 NLDLHSIEYVVFDEADRLFEMGF 281
>gi|168065191|ref|XP_001784538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663919|gb|EDQ50659.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTFKF KEL K+T L+ L+GGDSM+ QF +L +PD+++ATPGR +H + E+E + L
Sbjct: 92 QTFKFCKELSKYTDLKIAILVGGDSMEAQFEQLAGNPDVIIATPGRLMHHLSEVEGMSLR 151
Query: 76 SIQYVVFDEADRLFEMGF 93
+++Y+VFDEADRLFEMGF
Sbjct: 152 TVEYIVFDEADRLFEMGF 169
>gi|323338349|gb|EGA79576.1| Dbp10p [Saccharomyces cerevisiae Vin13]
Length = 581
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 11 SFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
S + QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM
Sbjct: 120 SRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEM 179
Query: 71 ELKLSSIQYVVFDEADRLFEMGF 93
L L S++YVVFDEADRLFEMGF
Sbjct: 180 NLDLKSVEYVVFDEADRLFEMGF 202
>gi|50312293|ref|XP_456179.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74689956|sp|Q6CIR0.1|DBP10_KLULA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49645315|emb|CAG98887.1| KLLA0F24684p [Kluyveromyces lactis]
Length = 973
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + KE K + L+S L GGDS+++QF + +PD+V+ATPGRFLH+ VEM L L S
Sbjct: 211 QTHRVFKEFSKGSDLRSILLTGGDSLEDQFGMMMGNPDVVIATPGRFLHLKVEMNLDLKS 270
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 271 VEYVVFDEADRLFEMGF 287
>gi|410730255|ref|XP_003671307.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
gi|401780125|emb|CCD26064.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
Length = 991
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT KE K T+L+S L GGDS+++QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 212 LAMQTHNVFKEFSKGTQLRSVLLTGGDSLEDQFGMMMNNPDVIIATPGRFLHLKVEMSLD 271
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L SI+Y VFDEADRLFEMGF
Sbjct: 272 LKSIEYAVFDEADRLFEMGF 291
>gi|294900795|ref|XP_002777119.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239884576|gb|EER08935.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 967
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K + LGKFT L+ ++GG SM++QF RL ++PD+++ TPGR +H +VE +L
Sbjct: 113 LAMQTIKVTRMLGKFTDLRLCLIVGGHSMESQFDRLSSNPDVLICTPGRLVHHMVEADLS 172
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L +QY+VFDEADRLFEMGF + QS
Sbjct: 173 LQRVQYIVFDEADRLFEMGFADDMQS 198
>gi|367013516|ref|XP_003681258.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
gi|359748918|emb|CCE92047.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
Length = 968
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/81 (55%), Positives = 60/81 (74%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K K+ + T L+S L GGDS++ QF + ++PD++VATPGRFLH+ VEM L
Sbjct: 196 LAMQTHKVFKDFSRGTHLRSVLLTGGDSLEEQFGMMMSNPDVIVATPGRFLHLKVEMNLD 255
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L SI+Y VFDE+DRLFEMGF+
Sbjct: 256 LKSIEYAVFDESDRLFEMGFE 276
>gi|255726598|ref|XP_002548225.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
gi|240134149|gb|EER33704.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
Length = 929
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T L+S L+GGDS++ F+++ PD++V TPGRFLH+ VEME L +
Sbjct: 195 QTYKQVKEFSNGTNLKSIVLIGGDSLEEDFSKMMTKPDVIVCTPGRFLHLKVEMEYDLKT 254
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 255 VRYIVFDEADRLFEMGF 271
>gi|294929941|ref|XP_002779431.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239888539|gb|EER11226.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 863
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 63/86 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K + LGKFT L+ ++GG SM++QF RL ++PD+++ TPGR +H +VE +L
Sbjct: 105 LAMQTIKVTRMLGKFTDLRLCLIVGGHSMESQFDRLSSNPDVLICTPGRLVHHMVEADLS 164
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L +QY+VFDEADRLFEMGF + Q+
Sbjct: 165 LQRVQYIVFDEADRLFEMGFSDDMQT 190
>gi|320581590|gb|EFW95810.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Ogataea parapolymorpha DL-1]
Length = 1254
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 63/83 (75%)
Query: 11 SFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
S + QT K KE + + L+S L+GGDSM++QF + A+PD+++ATPGRFLH+ EM
Sbjct: 166 SRELAMQTSKQFKEFSRGSDLRSLLLIGGDSMEDQFGAMMANPDVIIATPGRFLHLKTEM 225
Query: 71 ELKLSSIQYVVFDEADRLFEMGF 93
+L L +++Y+V+DEADRLFEMGF
Sbjct: 226 QLDLRTVEYIVYDEADRLFEMGF 248
>gi|150866736|ref|XP_001386424.2| hypothetical protein PICST_80003 [Scheffersomyces stipitis CBS
6054]
gi|158514831|sp|A3LZT3.2|DBP10_PICST RecName: Full=ATP-dependent RNA helicase DBP10
gi|149387992|gb|ABN68395.2| ATP dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 931
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/77 (57%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE K + L++ L GGDS+++QF+ + ++PDIV+ATPGRFLH+ VEM+L L +
Sbjct: 184 QTYKQVKEFSKGSDLRAIVLTGGDSLEDQFSSMVSNPDIVIATPGRFLHLQVEMQLDLKT 243
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEAD LFE GF
Sbjct: 244 VEYIVFDEADHLFEQGF 260
>gi|50291719|ref|XP_448292.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690788|sp|Q6FNA2.1|DBP10_CANGA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49527604|emb|CAG61253.1| unnamed protein product [Candida glabrata]
Length = 969
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/80 (55%), Positives = 58/80 (72%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT KE + T L+S L GGDS+++QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 197 LAMQTHSVFKEFSRGTHLRSVLLTGGDSLEDQFGMMMTNPDVIIATPGRFLHLKVEMNLD 256
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++Y VFDEADRLFEMGF
Sbjct: 257 LKSVEYAVFDEADRLFEMGF 276
>gi|366991885|ref|XP_003675708.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
gi|342301573|emb|CCC69343.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
Length = 977
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 59/80 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K+ K T+L+S L GGDS+++QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 207 LAMQTHNVFKDFSKGTQLRSVLLTGGDSLEDQFGMMMNNPDVIIATPGRFLHLKVEMNLD 266
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L SI+Y VFDEADRLFEMGF
Sbjct: 267 LKSIEYAVFDEADRLFEMGF 286
>gi|367006623|ref|XP_003688042.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
gi|357526349|emb|CCE65608.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
Length = 981
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 62/80 (77%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K K+ + ++L+S L GGDS++ QF+ + ++PD++VATPGRF+H+ VEM L
Sbjct: 206 LAMQTHKVFKDFSRGSQLRSVLLTGGDSLEEQFSMMMSNPDVIVATPGRFMHLKVEMGLD 265
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++YVVFDEADRLFEMGF
Sbjct: 266 LKTVEYVVFDEADRLFEMGF 285
>gi|410077309|ref|XP_003956236.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
gi|372462820|emb|CCF57101.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
Length = 973
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT KE K + L+S L GGDS+++QF + A+PD+++ATPGRFLH+ VEM L
Sbjct: 203 LAMQTHNVFKEFSKGSDLRSVLLTGGDSLEDQFGMIMANPDVIIATPGRFLHLKVEMNLD 262
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++Y+ FDEADRLFEMGF
Sbjct: 263 LKSVEYICFDEADRLFEMGF 282
>gi|449449653|ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Cucumis sativus]
Length = 789
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELGKFT L+ + L+GGDSM+ QF L SPD+++ATPGR +H + E+ ++ L
Sbjct: 114 QTLKFTKELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLR 173
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF+MGF
Sbjct: 174 TVEYVVFDEADCLFDMGF 191
>gi|449511783|ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Cucumis sativus]
Length = 789
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELGKFT L+ + L+GGDSM+ QF L SPD+++ATPGR +H + E+ ++ L
Sbjct: 114 QTLKFTKELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLR 173
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF+MGF
Sbjct: 174 TVEYVVFDEADCLFDMGF 191
>gi|302832666|ref|XP_002947897.1| hypothetical protein VOLCADRAFT_103677 [Volvox carteri f.
nagariensis]
gi|300266699|gb|EFJ50885.1| hypothetical protein VOLCADRAFT_103677 [Volvox carteri f.
nagariensis]
Length = 1338
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QT K V+EL +FT L++ CL+GGDSM+ QF L A+PDI+VATPGR H + E+E L L
Sbjct: 176 QTHKTVRELARFTDLRTACLVGGDSMEVQFEELAANPDIIVATPGRLAHHLEEVEGLSLR 235
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
S++Y V DEADR+FEMGF ++
Sbjct: 236 SVEYCVCDEADRMFEMGFIIQ 256
>gi|297842471|ref|XP_002889117.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
gi|297334958|gb|EFH65376.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
Length = 834
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-EL 72
+ +QT KF KELGKFT L+ + L+GGDSM++QF L PD+++ATPGR +H++ E+ ++
Sbjct: 110 LAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDM 169
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L +++YVVFDEAD LF MGF
Sbjct: 170 TLRTVEYVVFDEADSLFGMGF 190
>gi|334183955|ref|NP_177829.5| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
gi|75318355|sp|O49289.1|RH29_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 29
gi|2829912|gb|AAC00620.1| Similar ATP-dependent RNA Helicase [Arabidopsis thaliana]
gi|332197806|gb|AEE35927.1| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
Length = 845
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-EL 72
+ +QT KF KELGKFT L+ + L+GGDSM++QF L PD+++ATPGR +H++ E+ ++
Sbjct: 110 LAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDM 169
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L +++YVVFDEAD LF MGF
Sbjct: 170 TLRTVEYVVFDEADSLFGMGF 190
>gi|255712653|ref|XP_002552609.1| KLTH0C08866p [Lachancea thermotolerans]
gi|238933988|emb|CAR22171.1| KLTH0C08866p [Lachancea thermotolerans CBS 6340]
Length = 972
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K +E + + L+S L GG+S++ QF + ++PD+V+ATPGRFLH+ VEM L
Sbjct: 204 LAMQTHKVFREFSRGSDLRSVLLTGGESLEEQFGLMMSNPDVVIATPGRFLHLKVEMNLD 263
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L S++Y+VFDEADRLFEMGF+ EQ S
Sbjct: 264 LKSVEYLVFDEADRLFEMGFE-EQLS 288
>gi|50551521|ref|XP_503234.1| YALI0D24497p [Yarrowia lipolytica]
gi|74689555|sp|Q6C7X8.1|DBP10_YARLI RecName: Full=ATP-dependent RNA helicase DBP10
gi|49649102|emb|CAG81435.1| YALI0D24497p [Yarrowia lipolytica CLIB122]
Length = 926
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VK+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEMEL L+S
Sbjct: 187 QTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATPGRFLHLKVEMELSLAS 246
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+ FDEADRLFE+GF
Sbjct: 247 VEYICFDEADRLFELGF 263
>gi|66800711|ref|XP_629281.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
gi|74996456|sp|Q54CD8.1|DDX54_DICDI RecName: Full=ATP-dependent RNA helicase ddx54; AltName:
Full=ATP-dependent RNA helicase helA; AltName: Full=DEAD
box protein 54
gi|60462646|gb|EAL60848.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
Length = 1091
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VK+ + T+L++ ++GGDSM++QF L +PDI++ATPGR +H ++E + LS
Sbjct: 315 QTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMHHLLETGMSLSK 374
Query: 77 IQYVVFDEADRLFEMGFD 94
+QY+VFDEADRLFEMGF+
Sbjct: 375 VQYIVFDEADRLFEMGFN 392
>gi|294899003|ref|XP_002776456.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239883447|gb|EER08272.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 977
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K + LGKFT L+ ++GG SM++QF RL ++PD+++ TPGR +H +VE +L
Sbjct: 112 LAMQTIKVTRMLGKFTDLRLCLIVGGHSMESQFDRLSSNPDVLICTPGRLVHHMVEADLS 171
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L +QY+VFDEADRLFEMGF + QS
Sbjct: 172 LQRVQYIVFDEADRLFEMGFADDMQS 197
>gi|313233521|emb|CBY09693.1| unnamed protein product [Oikopleura dioica]
Length = 800
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF +L KF L + +LGGDS+DNQF +L +PDIV+ATPGR LH++VEM+ +L+
Sbjct: 121 QTAKFTNDLSKFCNLSVSVILGGDSLDNQFTQLDQNPDIVIATPGRLLHLLVEMDRRLNY 180
Query: 77 IQYVVFDEADRLFEMGF 93
++ VVFDEAD+LF++GF
Sbjct: 181 VKMVVFDEADQLFDLGF 197
>gi|255582203|ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 789
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELG+FT L+++ L+GGDSM++QF L +PDI++ATPGR +H + E+ ++ L
Sbjct: 112 QTLKFTKELGRFTDLRASLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLR 171
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF MGF
Sbjct: 172 TVEYVVFDEADSLFGMGF 189
>gi|307104599|gb|EFN52852.1| hypothetical protein CHLNCDRAFT_26393, partial [Chlorella
variabilis]
Length = 313
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QT K VKELG+ + L++ L+GGDSM+ QFA L A PDI+VATPGR +H + E+E + L
Sbjct: 51 QTHKVVKELGRHSNLRTAVLVGGDSMEAQFAELAAFPDILVATPGRLMHHLQEVEGMSLR 110
Query: 76 SIQYVVFDEADRLFEMGF 93
S +Y+VFDEADRLFEMGF
Sbjct: 111 SCEYLVFDEADRLFEMGF 128
>gi|303277179|ref|XP_003057883.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460540|gb|EEH57834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 532
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTFKF +EL KFT L+ C++GGDSM+ QF L +PD+ VATPGR LH V E++ L +
Sbjct: 165 QTFKFAQELSKFTDLRCVCIVGGDSMEAQFEDLATNPDLYVATPGRLLHHVEEIDGLTIR 224
Query: 76 SIQYVVFDEADRLFEMGF 93
S+Q+VV DEADRL EMGF
Sbjct: 225 SVQHVVLDEADRLLEMGF 242
>gi|294875674|ref|XP_002767430.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
gi|239868997|gb|EER00148.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
Length = 952
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 63/86 (73%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K + LGKFT L+ ++GG SM++QF RL ++PD+++ TPGR +H +VE +L
Sbjct: 105 LAMQTIKVTRMLGKFTDLRLCLIVGGHSMESQFDRLSSNPDVLICTPGRLVHHMVEADLS 164
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L +QY+VFDEADRLFEMGF + Q+
Sbjct: 165 LQRVQYIVFDEADRLFEMGFSDDMQT 190
>gi|403217984|emb|CCK72476.1| hypothetical protein KNAG_0K01110 [Kazachstania naganishii CBS
8797]
Length = 1001
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K+ K T L+S L GGDS++ QF + ++PD+V+ATPGRFLH+ VEM L L +
Sbjct: 223 QTHNVFKDFSKGTHLRSVLLTGGDSLEEQFGMMMSNPDVVIATPGRFLHLKVEMNLVLKT 282
Query: 77 IQYVVFDEADRLFEMGF 93
++Y VFDEADRLFEMGF
Sbjct: 283 VEYAVFDEADRLFEMGF 299
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VK+ + L+S ++GGDSM++QFA L +PDI+VATPGR +H + E+ + LS+
Sbjct: 342 QTYKVVKDFTYGSNLRSCLVVGGDSMEDQFAELARNPDIIVATPGRLVHHLQEVGMGLST 401
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
+QY+VFDEADRLFEMGF +QQ
Sbjct: 402 VQYIVFDEADRLFEMGF--QQQ 421
>gi|384252494|gb|EIE25970.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 806
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
Q K VKEL ++T L++ L+GGDSM+ QFA L A+PDI++ATPGR +H + E+E + L
Sbjct: 129 QLHKVVKELSRYTDLRTAVLVGGDSMEAQFAELAANPDILLATPGRLMHHLQEVEGMSLQ 188
Query: 76 SIQYVVFDEADRLFEMGF 93
++QY VFDEAD+LFEMGF
Sbjct: 189 TVQYCVFDEADQLFEMGF 206
>gi|393245270|gb|EJD52781.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 927
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
E GK + L+ ++GG+ MD+QF L ++PD+++ATPGR LH+ VEM L L SIQYVVFD
Sbjct: 215 ENGKGSALRWGLVVGGEGMDDQFEMLTSNPDVIIATPGRLLHVAVEMNLDLRSIQYVVFD 274
Query: 84 EADRLFEMGFDV 95
EADRLFEMGF V
Sbjct: 275 EADRLFEMGFSV 286
>gi|159490042|ref|XP_001702998.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270905|gb|EDO96736.1| predicted protein [Chlamydomonas reinhardtii]
Length = 485
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QT K V++L K+T L++ CL+GGDSM+ QFA L A+PD++VATPGR H + E+E L L
Sbjct: 95 QTHKTVRDLCKYTSLRTACLVGGDSMEVQFAELAANPDVIVATPGRLAHHLEEVEGLSLR 154
Query: 76 SIQYVVFDEADRLFEMGF 93
+++Y V DEADR+FEMGF
Sbjct: 155 AVEYCVCDEADRMFEMGF 172
>gi|37573051|dbj|BAC98579.1| putative ATP-dependent RNA-helicase [Oryza sativa Japonica Group]
Length = 828
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 95 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 154
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 155 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 188
>gi|218201153|gb|EEC83580.1| hypothetical protein OsI_29242 [Oryza sativa Indica Group]
Length = 883
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 211
>gi|158513663|sp|A2YV85.2|RH29_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 29; Short=RNAH
Length = 851
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 211
>gi|115476424|ref|NP_001061808.1| Os08g0416100 [Oryza sativa Japonica Group]
gi|158513705|sp|A3BT52.2|RH29_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 29; Short=RNAH
gi|113623777|dbj|BAF23722.1| Os08g0416100 [Oryza sativa Japonica Group]
gi|222640554|gb|EEE68686.1| hypothetical protein OsJ_27320 [Oryza sativa Japonica Group]
Length = 851
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 211
>gi|51449873|gb|AAU01909.1| putative ATP-dependent RNA helicase [Oryza sativa Indica Group]
Length = 828
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 95 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 154
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 155 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 188
>gi|301111750|ref|XP_002904954.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095284|gb|EEY53336.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 847
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT +F K+L KFT L+ ++GG+ MD QF + ++PD++VATPGR +H++ E+ + L
Sbjct: 121 QTLRFAKQLSKFTSLKMALIVGGEGMDQQFEAIASNPDVLVATPGRLMHLLQEIPDFNLK 180
Query: 76 SIQYVVFDEADRLFEMGFDVEQQ 98
+++YVVFDEADR+FEMGF + Q
Sbjct: 181 AVEYVVFDEADRIFEMGFAEQLQ 203
>gi|145348205|ref|XP_001418546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578775|gb|ABO96839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 546
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTFKF KEL KFT L+ L+GGDSM+ QFA L +PD++VATPGR LH + E++ L
Sbjct: 170 QTFKFAKELAKFTDLRVAALVGGDSMEAQFADLSNNPDVIVATPGRLLHHIDEVKAFTLR 229
Query: 76 SIQYVVFDEADRLFEMGF 93
++ +VV DEADRL EMGF
Sbjct: 230 TVCHVVLDEADRLLEMGF 247
>gi|357474503|ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
gi|355508591|gb|AES89733.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
Length = 787
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-EL 72
+ QQT KF KELG FT L+ + L+GGDSM++QF L +PDI++ATPGR +H + E+ ++
Sbjct: 100 LAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDM 159
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++YVVFDEAD LF MGF
Sbjct: 160 SLRKVEYVVFDEADCLFGMGF 180
>gi|326526589|dbj|BAJ97311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 880
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF +LGKFT L++ ++GG SM++QF L +PDIV+ATP
Sbjct: 142 AGIRALILSPTRDLATQTLKFTHQLGKFTDLKTGLIVGGGSMESQFEVLADNPDIVIATP 201
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
GRF+HI+ + +L L S++YVVFDEAD LF +GF
Sbjct: 202 GRFVHILSMVDDLSLRSVEYVVFDEADSLFSLGF 235
>gi|356558698|ref|XP_003547640.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELG FT L+ + L+GGDSM++QF L SPDI++ATPGR +H + E+ ++ L
Sbjct: 103 QTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLR 162
Query: 76 SIQYVVFDEADRLFEMGF 93
S++YVVFDEAD LF MGF
Sbjct: 163 SVEYVVFDEADCLFGMGF 180
>gi|326504194|dbj|BAJ90929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 873
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF +LGKFT L++ ++GG SM++QF L +PDIV+ATP
Sbjct: 135 AGIRALILSPTRDLATQTLKFTHQLGKFTDLKTGLIVGGGSMESQFEVLADNPDIVIATP 194
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
GRF+HI+ + +L L S++YVVFDEAD LF +GF
Sbjct: 195 GRFVHILSMVDDLSLRSVEYVVFDEADSLFSLGF 228
>gi|326514620|dbj|BAJ96297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 873
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF +LGKFT L++ ++GG SM++QF L +PDIV+ATP
Sbjct: 135 AGIRALILSPTRDLATQTLKFTHQLGKFTDLKTGLIVGGGSMESQFEVLADNPDIVIATP 194
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
GRF+HI+ + +L L S++YVVFDEAD LF +GF
Sbjct: 195 GRFVHILSMVDDLSLRSVEYVVFDEADSLFSLGF 228
>gi|385303290|gb|EIF47375.1| putative dead box atp-dependent rna helicase [Dekkera bruxellensis
AWRI1499]
Length = 235
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 60/77 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT++ + E K T ++S L+GGDS+++QF+ + +PD V+ATPGR LH+ VEM L L +
Sbjct: 43 QTYRQLXEFSKGTGIRSLLLVGGDSLEDQFSAMMDNPDAVIATPGRLLHLQVEMRLSLKT 102
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+V+DEADRLFEMGF
Sbjct: 103 VEYIVYDEADRLFEMGF 119
>gi|348685911|gb|EGZ25726.1| hypothetical protein PHYSODRAFT_486355 [Phytophthora sojae]
Length = 852
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT +F K+L KFT L+ ++GG+ MD QF + A+PD++VATPGR +H + E+ + L
Sbjct: 121 QTLRFAKQLSKFTSLKMALIVGGEGMDQQFEAIAANPDVLVATPGRLMHHLQEIPDFNLK 180
Query: 76 SIQYVVFDEADRLFEMGFDVEQQ 98
+++YVVFDEADR+FEMGF + Q
Sbjct: 181 AVEYVVFDEADRIFEMGFAEQLQ 203
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT++ VKEL + L+S ++GGD+M +QF L +PDI++ATPGR +H + E+ + L +
Sbjct: 353 QTYRVVKELSSGSDLRSCVIVGGDNMADQFTELARNPDIIIATPGRLVHHLTEVNMGLHT 412
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
+QY+VFDEADRLFEMGF + Q
Sbjct: 413 VQYIVFDEADRLFEMGFADQLQ 434
>gi|405118285|gb|AFR93059.1| DEAD box RNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 803
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q V++DEADRLFE
Sbjct: 156 LRWAVIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFE 215
Query: 91 MGFDVEQQ 98
MGFDV+ Q
Sbjct: 216 MGFDVQLQ 223
>gi|58263322|ref|XP_569071.1| DEAD box RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108656|ref|XP_776981.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818048|sp|P0CR07.1|DBP10_CRYNB RecName: Full=ATP-dependent RNA helicase DBP10
gi|338818049|sp|P0CR06.1|DBP10_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP10
gi|50259664|gb|EAL22334.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223721|gb|AAW41764.1| DEAD box RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 802
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q V++DEADRLFE
Sbjct: 151 LRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFE 210
Query: 91 MGFDVEQQ 98
MGFDV+ Q
Sbjct: 211 MGFDVQLQ 218
>gi|270358682|gb|ACZ81471.1| CNB00610 [Cryptococcus heveanensis]
Length = 974
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
GK L+ ++GG+ +D QF ++ +PD+V+ATPGRFLH+ VEM L L +Q VV+DEA
Sbjct: 145 GKVESLRWALIIGGEGLDTQFDKMSRNPDVVIATPGRFLHLAVEMRLDLRHLQVVVYDEA 204
Query: 86 DRLFEMGFDVE 96
DRLFEMGFDV+
Sbjct: 205 DRLFEMGFDVQ 215
>gi|356506148|ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELG FT L+ + L+GGDSM+ QF L SPDI++ATPGR +H + E+ ++ L
Sbjct: 103 QTLKFTKELGHFTDLRVSLLVGGDSMEIQFEELAQSPDIIIATPGRLMHHLSEVDDMSLR 162
Query: 76 SIQYVVFDEADRLFEMGF 93
S++YVVFDEAD LF MGF
Sbjct: 163 SVEYVVFDEADCLFGMGF 180
>gi|291001325|ref|XP_002683229.1| ATP-dependent dead box RNA helicase [Naegleria gruberi]
gi|284096858|gb|EFC50485.1| ATP-dependent dead box RNA helicase [Naegleria gruberi]
Length = 892
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 25 LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDE 84
+GK + L++ L GG SM+ QF RL A+PDI++ATPGR LHI++E L L ++YVVFDE
Sbjct: 133 IGKTSDLKTCMLFGGKSMEGQFERLSANPDIIIATPGRLLHIILETGLSLKRVEYVVFDE 192
Query: 85 ADRLFEMGF 93
ADRLFEMG
Sbjct: 193 ADRLFEMGL 201
>gi|357147783|ref|XP_003574483.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 29-like
[Brachypodium distachyon]
Length = 851
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 65/94 (69%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF +LGKFT L++ ++GG S+D+QF L +PDI++ATP
Sbjct: 124 AGIRALILSPTRDLAMQTLKFAHQLGKFTGLKTEAIVGGGSIDSQFEILADNPDIIIATP 183
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
GR +HI+ + +L L S++YVVFDEAD LF +GF
Sbjct: 184 GRLVHILTMVNDLSLRSVEYVVFDEADSLFSLGF 217
>gi|321252662|ref|XP_003192483.1| DEAD box RNA helicase [Cryptococcus gattii WM276]
gi|317458951|gb|ADV20696.1| DEAD box RNA helicase, putative [Cryptococcus gattii WM276]
Length = 798
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q V++DEADRLFE
Sbjct: 151 LRWAVIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFE 210
Query: 91 MGFDVE 96
MGFDV+
Sbjct: 211 MGFDVQ 216
>gi|224085049|ref|XP_002307470.1| predicted protein [Populus trichocarpa]
gi|222856919|gb|EEE94466.1| predicted protein [Populus trichocarpa]
Length = 510
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KELG+FT L+ + L+GGD M++QF L +PDI++ATPGR +H + E+ ++ L
Sbjct: 110 QTLKFTKELGRFTDLRISLLVGGDRMESQFEDLSQNPDIIIATPGRLMHHLSEIDDMSLK 169
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF MGF
Sbjct: 170 TVEYVVFDEADSLFGMGF 187
>gi|388581211|gb|EIM21521.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 929
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Query: 21 FVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 79
+ KE+G+ + ++ + ++GG+S+D+QF+ + ++PD+++ATPGR LH+ VEM L L S++Y
Sbjct: 189 YKKEMGEGQEEMRWSVIVGGESLDDQFSLIASNPDVIIATPGRLLHLAVEMNLDLKSVEY 248
Query: 80 VVFDEADRLFEMGFDVE 96
VVFDEADRLFEMGF ++
Sbjct: 249 VVFDEADRLFEMGFQLQ 265
>gi|255072735|ref|XP_002500042.1| predicted protein [Micromonas sp. RCC299]
gi|226515304|gb|ACO61300.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 523
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QT+KF +EL KFT L+ C++GGDSM+ QF L ++PD++VATPGR LH V E+ +
Sbjct: 156 QTYKFAQELSKFTDLRCVCVVGGDSMEAQFDDLASNPDLLVATPGRLLHHVEEISGFSIR 215
Query: 76 SIQYVVFDEADRLFEMGF 93
S+ +VV DEADRL EMGF
Sbjct: 216 SVSHVVLDEADRLLEMGF 233
>gi|164660566|ref|XP_001731406.1| hypothetical protein MGL_1589 [Malassezia globosa CBS 7966]
gi|159105306|gb|EDP44192.1| hypothetical protein MGL_1589 [Malassezia globosa CBS 7966]
Length = 948
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 50/58 (86%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+ +D QFA + A+PD+V+ATPGR LH+VVEM L L S++YVVFDEADRLFEMGF
Sbjct: 195 IVGGEGLDEQFAMMTANPDVVIATPGRLLHLVVEMNLDLKSVEYVVFDEADRLFEMGF 252
>gi|328864018|gb|EGG13117.1| hypothetical protein MELLADRAFT_32308 [Melampsora larici-populina
98AG31]
Length = 966
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 51/61 (83%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDV 95
++GGDS++ QFA ++PD+++ATPGR LH+ VEM L L S+QY+VFDEADRLFEMGF+
Sbjct: 241 IVGGDSLEEQFAMFASNPDVIIATPGRLLHLAVEMNLDLKSVQYIVFDEADRLFEMGFET 300
Query: 96 E 96
+
Sbjct: 301 Q 301
>gi|330812848|ref|XP_003291329.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
gi|325078509|gb|EGC32157.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
Length = 1031
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VK+ + T L++ ++GGDSM+ Q+ L +PDI++ATPGR +H + E + LS
Sbjct: 304 QTFKVVKDFTQGTNLRTILIVGGDSMEEQYDDLARNPDIIIATPGRLMHHLQETGMSLSK 363
Query: 77 IQYVVFDEADRLFEMGFD 94
++Y+VFDEADRLFEMGF+
Sbjct: 364 VKYIVFDEADRLFEMGFN 381
>gi|302679352|ref|XP_003029358.1| hypothetical protein SCHCODRAFT_257992 [Schizophyllum commune H4-8]
gi|300103048|gb|EFI94455.1| hypothetical protein SCHCODRAFT_257992 [Schizophyllum commune H4-8]
Length = 924
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVF 82
+E K L+ ++GG+ MD QF + +PD+++ATPGR LH++VEM L L S+QYVVF
Sbjct: 209 EETSKGQSLRWGLIVGGEGMDEQFEMMTNNPDVIIATPGRLLHLIVEMNLDLKSVQYVVF 268
Query: 83 DEADRLFEMGFD 94
DEADRLFEMGF+
Sbjct: 269 DEADRLFEMGFE 280
>gi|393217844|gb|EJD03333.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 964
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/58 (65%), Positives = 50/58 (86%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+SMD QF + ++PD+++ATPGR LH++VEM L L S+QYVVFDEADRLFEMGF
Sbjct: 230 VVGGESMDEQFEMITSNPDVIIATPGRLLHLIVEMNLDLRSVQYVVFDEADRLFEMGF 287
>gi|359492294|ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Vitis vinifera]
Length = 784
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KEL ++T ++ + L+GGDSM++QF L +PDI++ATPGR +H + E+ ++ L
Sbjct: 112 QTLKFTKELARYTDVRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLR 171
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF MGF
Sbjct: 172 TVEYVVFDEADCLFGMGF 189
>gi|242081437|ref|XP_002445487.1| hypothetical protein SORBIDRAFT_07g020310 [Sorghum bicolor]
gi|241941837|gb|EES14982.1| hypothetical protein SORBIDRAFT_07g020310 [Sorghum bicolor]
Length = 666
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A + LI P + QT KF +LGKFT L+++ ++GGDSM++QF L PDI++ATP
Sbjct: 130 AGVRALILSPTRDLAMQTLKFCIQLGKFTDLRTSIIVGGDSMESQFEDLSECPDIIIATP 189
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
GR +H + ++ ++ L S++YVVFDEAD LF MGF
Sbjct: 190 GRLMHHLNDVKDMTLRSVEYVVFDEADSLFSMGF 223
>gi|403414414|emb|CCM01114.1| predicted protein [Fibroporia radiculosa]
Length = 960
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 52/64 (81%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ + ++GG+ MD QF + +PDI++ATPGR LH++VEM + L S+QYVVFDEADRLFE
Sbjct: 221 LRWSLIVGGEGMDEQFETISHNPDIIIATPGRLLHLIVEMNMDLKSVQYVVFDEADRLFE 280
Query: 91 MGFD 94
MGF+
Sbjct: 281 MGFE 284
>gi|325180097|emb|CCA14499.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 836
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT +F K L K+T L+ + ++GG+ M+ QF+ L ++PDI+VATPGR +H + E+ + L
Sbjct: 111 QTLQFTKGLAKYTSLRVSLIVGGEGMEQQFSALASNPDILVATPGRLMHHLQEIPDFNLK 170
Query: 76 SIQYVVFDEADRLFEMGF 93
S++YVVFDEADRLFEMGF
Sbjct: 171 SVEYVVFDEADRLFEMGF 188
>gi|302142729|emb|CBI19932.3| unnamed protein product [Vitis vinifera]
Length = 786
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT KF KEL ++T ++ + L+GGDSM++QF L +PDI++ATPGR +H + E+ ++ L
Sbjct: 112 QTLKFTKELARYTDVRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLR 171
Query: 76 SIQYVVFDEADRLFEMGF 93
+++YVVFDEAD LF MGF
Sbjct: 172 TVEYVVFDEADCLFGMGF 189
>gi|395333010|gb|EJF65388.1| ATP-dependent RNA helicase DBP10 [Dichomitus squalens LYAD-421 SS1]
Length = 962
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V E K L+ ++GG+S+D QF + +PD+++ATPGR LH++VEM L L S+QYVV
Sbjct: 211 VDEGKKGQSLRWGLVVGGESLDEQFEMISNNPDVIIATPGRLLHLIVEMNLDLKSVQYVV 270
Query: 82 FDEADRLFEMGF 93
FDEADRLFEMGF
Sbjct: 271 FDEADRLFEMGF 282
>gi|449546419|gb|EMD37388.1| hypothetical protein CERSUDRAFT_135966 [Ceriporiopsis subvermispora
B]
Length = 945
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 27 KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEAD 86
K L+ + ++GG+ +D QF + +PD+++ATPGR LH++VEM L L SIQYVVFDEAD
Sbjct: 206 KGQSLRWSLIVGGEGLDEQFEMITNNPDVIIATPGRLLHLIVEMNLDLKSIQYVVFDEAD 265
Query: 87 RLFEMGFD 94
RLFEMGF+
Sbjct: 266 RLFEMGFE 273
>gi|169847756|ref|XP_001830587.1| ATP-dependent RNA helicase DBP10 [Coprinopsis cinerea okayama7#130]
gi|116508323|gb|EAU91218.1| ATP-dependent RNA helicase DBP10 [Coprinopsis cinerea okayama7#130]
Length = 949
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
E K L+ ++GG+ +D QF + +PD+++ATPGR LH+VVEM L L SIQYVVFD
Sbjct: 212 ESSKGQSLRWGLVVGGEGLDEQFEMITNNPDVIIATPGRLLHLVVEMNLDLKSIQYVVFD 271
Query: 84 EADRLFEMGFD 94
EADRLFEMGF+
Sbjct: 272 EADRLFEMGFE 282
>gi|392570219|gb|EIW63392.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 956
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 50/58 (86%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QF + ++PD+++ATPGR LH++VEM L L SI+YVVFDEADRLFEMGF
Sbjct: 230 VVGGESLDEQFEMISSNPDVIIATPGRLLHLIVEMNLDLKSIEYVVFDEADRLFEMGF 287
>gi|389744407|gb|EIM85590.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 910
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 50/59 (84%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
++GG+ +D QF + ++PD+++ATPGR LH++VEM L L S+QYVVFDEADRLFEMGF+
Sbjct: 160 IVGGEGLDEQFEMISSNPDVIIATPGRLLHLIVEMNLDLRSVQYVVFDEADRLFEMGFE 218
>gi|443893869|dbj|GAC71325.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 1155
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/58 (65%), Positives = 49/58 (84%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QFA + +PD+V+ATPGR LH+ VEM L L S++YVVFDEADRLFEMGF
Sbjct: 265 IVGGESLDEQFAIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGF 322
>gi|343428855|emb|CBQ72400.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Sporisorium reilianum SRZ2]
Length = 1178
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/58 (65%), Positives = 49/58 (84%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QFA + +PD+V+ATPGR LH+ VEM L L S++YVVFDEADRLFEMGF
Sbjct: 267 IVGGESLDEQFAIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGF 324
>gi|298708839|emb|CBJ30797.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 819
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QT F +++ K L+ L+GGDSMD QF L +PDI++ATPGR +H + E+ E L
Sbjct: 95 QTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLR 154
Query: 76 SIQYVVFDEADRLFEMGF 93
S++ VVFDEADRLFEMGF
Sbjct: 155 SVEVVVFDEADRLFEMGF 172
>gi|409044923|gb|EKM54404.1| hypothetical protein PHACADRAFT_258225 [Phanerochaete carnosa
HHB-10118-sp]
Length = 852
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 26 GKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
G+++K L+ ++GG+ MD QF + +PD+++ATPGR LH++VEM L S+QYVV
Sbjct: 109 GEYSKKGQALRWGLIVGGEGMDEQFEMMSNNPDVIIATPGRLLHLIVEMNLDFKSVQYVV 168
Query: 82 FDEADRLFEMGFD 94
FDEADRLFEMGF+
Sbjct: 169 FDEADRLFEMGFE 181
>gi|392593758|gb|EIW83083.1| ATP-dependent RNA helicase DBP10 [Coniophora puteana RWD-64-598
SS2]
Length = 845
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
++GG+ +D QF + +PD+++ATPGR LH++VEM L L S+QYVVFDEADRLFEMGF+
Sbjct: 122 IVGGEGLDEQFEMITNNPDVIIATPGRLLHLIVEMNLDLRSVQYVVFDEADRLFEMGFE 180
>gi|443923379|gb|ELU42631.1| ATP-dependent RNA helicase DBP10 [Rhizoctonia solani AG-1 IA]
Length = 978
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
G L+ ++GG+ MD QF + ++PD+++ATPGR LH+ VEM L L S+QYVVFDEA
Sbjct: 218 GSGQNLRWGLVVGGEGMDEQFEMISSNPDVIIATPGRLLHLAVEMNLDLRSVQYVVFDEA 277
Query: 86 DRLFEMGFDVEQQ 98
DRLFE+GF Q
Sbjct: 278 DRLFELGFATALQ 290
>gi|336371386|gb|EGN99725.1| hypothetical protein SERLA73DRAFT_88322 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384141|gb|EGO25289.1| hypothetical protein SERLADRAFT_437047 [Serpula lacrymans var.
lacrymans S7.9]
Length = 962
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 50/59 (84%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
++GG+ +D QF + ++PD+++ATPGR LH++VEM L L S++YVVFDEADRLFEMGF+
Sbjct: 225 VVGGEGLDEQFEMITSNPDVIIATPGRLLHLIVEMNLDLKSVEYVVFDEADRLFEMGFE 283
>gi|358058122|dbj|GAA96101.1| hypothetical protein E5Q_02762 [Mixia osmundae IAM 14324]
Length = 928
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Query: 17 QTFKFVKELGKFTK------LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
Q K K+L + K L+ ++GGD ++ QF + ++PD+++ATPGR LH++VEM
Sbjct: 190 QVLKVGKDLSRGLKEGDSETLRWGLIIGGDGLEEQFGLMASNPDVIIATPGRLLHLIVEM 249
Query: 71 ELKLSSIQYVVFDEADRLFEMGFDVE 96
+L +SS+ Y VFDEADRLFEMGF +
Sbjct: 250 DLDMSSVAYAVFDEADRLFEMGFATQ 275
>gi|388856698|emb|CCF49658.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Ustilago hordei]
Length = 1182
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QF + +PD+V+ATPGR LH+ VEM L L S++YVVFDEADRLFEMGF
Sbjct: 267 IVGGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGF 324
>gi|71022233|ref|XP_761347.1| hypothetical protein UM05200.1 [Ustilago maydis 521]
gi|74699940|sp|Q4P3W3.1|DBP10_USTMA RecName: Full=ATP-dependent RNA helicase DBP10
gi|46097655|gb|EAK82888.1| hypothetical protein UM05200.1 [Ustilago maydis 521]
Length = 1154
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QF + +PD+V+ATPGR LH+ VEM L L S++YVVFDEADRLFEMGF
Sbjct: 264 IVGGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGF 321
>gi|390602288|gb|EIN11681.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 970
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 51/64 (79%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ +D QF + +PD+++ATPGR LH++VEM L L S++YVVFDEADRLFE
Sbjct: 230 LRWALVVGGEGLDEQFEMMTNNPDVIIATPGRLLHLIVEMNLDLRSVEYVVFDEADRLFE 289
Query: 91 MGFD 94
MGF+
Sbjct: 290 MGFE 293
>gi|403170885|ref|XP_003330153.2| hypothetical protein PGTG_11063 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168932|gb|EFP85734.2| hypothetical protein PGTG_11063 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1018
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDV 95
++GGDS+++QF +PD+++ATPGR LH+VVEM L L S+ +VVFDEADRLFEMGF
Sbjct: 210 IVGGDSLEDQFTMFSTNPDVIIATPGRLLHLVVEMNLDLKSVAFVVFDEADRLFEMGFAT 269
Query: 96 E 96
+
Sbjct: 270 Q 270
>gi|353241240|emb|CCA73067.1| related to DBP10-putative ATP-dependent RNA helicase involved in
ribosome biogenesis [Piriformospora indica DSM 11827]
Length = 955
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ +D QF + +PD+++ATPGR LH++VEM L LS+IQY+VFDEADRLFE
Sbjct: 209 LRWALVVGGEGLDEQFETMANNPDVIIATPGRLLHLLVEMSLNLSTIQYLVFDEADRLFE 268
Query: 91 MGFDVEQQS 99
+GF S
Sbjct: 269 LGFSTHLTS 277
>gi|426197540|gb|EKV47467.1| hypothetical protein AGABI2DRAFT_118043 [Agaricus bisporus var.
bisporus H97]
Length = 926
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
++GG+ +D QF + +PD+++ATPGR LH++VEM L L SI YVVFDEADRLFEMGF+
Sbjct: 224 VVGGEGLDEQFEMITNNPDVIIATPGRLLHLIVEMNLDLKSINYVVFDEADRLFEMGFE 282
>gi|409080625|gb|EKM80985.1| hypothetical protein AGABI1DRAFT_127033 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 926
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
++GG+ +D QF + +PD+++ATPGR LH++VEM L L SI YVVFDEADRLFEMGF+
Sbjct: 224 VVGGEGLDEQFEMITNNPDVIIATPGRLLHLIVEMNLDLKSINYVVFDEADRLFEMGFE 282
>gi|238589821|ref|XP_002392132.1| hypothetical protein MPER_08336 [Moniliophthora perniciosa FA553]
gi|215457763|gb|EEB93062.1| hypothetical protein MPER_08336 [Moniliophthora perniciosa FA553]
Length = 335
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 27 KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEAD 86
K L+ + ++GG+ +D QF + +PD+++ATPGR LH+ VEM L L S+ YVVFDEAD
Sbjct: 114 KGANLRWSLIVGGEGLDEQFETMTNNPDVIIATPGRLLHLAVEMNLDLKSVHYVVFDEAD 173
Query: 87 RLFEMGFD 94
RLFEMGF+
Sbjct: 174 RLFEMGFE 181
>gi|46389757|dbj|BAD15109.1| hypothetical protein [Nicotiana tabacum]
Length = 274
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A + LI P + QT KF KELG+FT ++ + L+GGDS +QF L SPDI++ATP
Sbjct: 39 AGVRALILSPTRDLALQTLKFTKELGRFTDIRVSLLVGGDSKGSQFEELAQSPDIIIATP 98
Query: 61 GRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGF 93
R +H + E+ ++ +++YVVFDEAD LF MGF
Sbjct: 99 RRLMHHLSEVDDMSRRTVEYVVFDEADCLFSMGF 132
>gi|296806549|ref|XP_002844084.1| ATP-dependent RNA helicase DBP10 [Arthroderma otae CBS 113480]
gi|238845386|gb|EEQ35048.1| ATP-dependent RNA helicase DBP10 [Arthroderma otae CBS 113480]
Length = 930
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 9/77 (11%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMSLDLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
I RLFEMGF
Sbjct: 233 I---------RLFEMGF 240
>gi|402224187|gb|EJU04250.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 926
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+ MD QF + +PD+++ATPGR LH+VVEM L L SI YVVFDEADRLFE GF
Sbjct: 231 IVGGEGMDEQFEMITNNPDVIIATPGRLLHLVVEMNLDLKSINYVVFDEADRLFEQGF 288
>gi|403338502|gb|EJY68492.1| hypothetical protein OXYTRI_10894 [Oxytricha trifallax]
Length = 947
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I QT + L K+T L + GG M+NQF RL +PDI++A+PGR +H + E L
Sbjct: 116 IAMQTATYFMSLAKYTDLTYALITGGSDMENQFERLLLNPDIIIASPGRLMHCIQETGLS 175
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
LS +Q VV+DE DRLFE+GF + +S D
Sbjct: 176 LSQVQLVVYDECDRLFELGFAEQLKSITD 204
>gi|1764094|gb|AAB39865.1| ATP-dependent RNA helicase [Leishmania amazonensis]
Length = 855
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 6 INYLISFPIVQQTFKFVKE---LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I L+ P + + + ++ L KF L+ L+GGDSMD QF L ++PDIVVATPGR
Sbjct: 95 IRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNPDIVVATPGR 154
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
LHI+ E L L+S++ +V DEADRLFE+G
Sbjct: 155 LLHIMEEASLHLTSVRCLVLDEADRLFELGL 185
>gi|401428549|ref|XP_003878757.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495006|emb|CBZ30309.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 804
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
+S I++ F L KF L+ L+GGDSMD QF L ++PDIVVATPGR LHI+ E
Sbjct: 104 LSLQILRNGFA----LNKFLDLRFAALVGGDSMDQQFELLASNPDIVVATPGRLLHIMEE 159
Query: 70 MELKLSSIQYVVFDEADRLFEMGF 93
L L+S++ +V DEADRLFE+G
Sbjct: 160 ASLHLTSVRCLVLDEADRLFELGL 183
>gi|340053299|emb|CCC47587.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 857
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +LGKF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E L+LS
Sbjct: 109 QILRFGIKLGKFLDLRFVALVGGNSLEQQFEMLASNPDIVVATPGRILHIMEEASLQLSM 168
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 169 VKLLVLDEADRLFELGL 185
>gi|398022356|ref|XP_003864340.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322502575|emb|CBZ37658.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 803
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
+S I++ F L KF L+ L+GGDSMD QF L ++PD+VVATPGR LHI+ E
Sbjct: 104 LSLQILRNGFA----LNKFLDLRFAALVGGDSMDQQFELLASNPDVVVATPGRLLHIMEE 159
Query: 70 MELKLSSIQYVVFDEADRLFEMGF 93
L L+S++ +V DEADRLFE+G
Sbjct: 160 ASLHLTSVRCLVLDEADRLFELGL 183
>gi|146099084|ref|XP_001468551.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134072919|emb|CAM71636.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 803
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
+S I++ F L KF L+ L+GGDSMD QF L ++PD+VVATPGR LHI+ E
Sbjct: 104 LSLQILRNGFA----LNKFLDLRFAALVGGDSMDQQFELLASNPDVVVATPGRLLHIMEE 159
Query: 70 MELKLSSIQYVVFDEADRLFEMGF 93
L L+S++ +V DEADRLFE+G
Sbjct: 160 ASLHLTSVRCLVLDEADRLFELGL 183
>gi|342180685|emb|CCC90161.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 842
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +LGKF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E L+LS
Sbjct: 110 QILRFGIQLGKFLDLRFVALVGGNSLEQQFEMLASNPDIVVATPGRILHIMEEASLQLSM 169
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 170 VKCLVLDEADRLFELGL 186
>gi|157875861|ref|XP_001686302.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|68129376|emb|CAJ07917.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 803
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 6 INYLISFPIVQQTFKFVKE---LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I L+ P + + + ++ L KF L+ L+GGDSMD QF L ++PD+VVATPGR
Sbjct: 93 IRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNPDVVVATPGR 152
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
LHI+ E L L+S++ +V DEADRLFE+G
Sbjct: 153 LLHIMEEASLHLTSVRCLVLDEADRLFELGL 183
>gi|343474607|emb|CCD13783.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +LGKF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E L+LS
Sbjct: 25 QILRFGIQLGKFLDLRFVALVGGNSLEQQFEMLASNPDIVVATPGRILHIMEEASLQLSM 84
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 85 VKCLVLDEADRLFELGL 101
>gi|392575556|gb|EIW68689.1| hypothetical protein TREMEDRAFT_39597 [Tremella mesenterica DSM
1558]
Length = 721
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+S+D+ F L PD+VVATPGR LH++VEM L L +++ V++DEADRLFE
Sbjct: 145 LRWAIIMGGESLDDHFEVLSGKPDVVVATPGRMLHLIVEMSLDLRTLEMVIYDEADRLFE 204
Query: 91 MGFDVE 96
MGF+ +
Sbjct: 205 MGFESQ 210
>gi|412993031|emb|CCO16564.1| predicted protein [Bathycoccus prasinos]
Length = 910
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTF +++ KFT L+ L+GGDSM+ QF L +PD++VATPGR LH E+E L
Sbjct: 154 QTFAVTRDMAKFTDLRLCALVGGDSMEMQFEDLANNPDVIVATPGRVLHHTNEIESFSLR 213
Query: 76 SIQYVVFDEADRLFEMGFDVEQQS 99
++ VV DEADRL EMGF EQ S
Sbjct: 214 LVEKVVLDEADRLLEMGFQ-EQLS 236
>gi|407411508|gb|EKF33546.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 825
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +L KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E LKLS
Sbjct: 113 QILRFGIQLNKFLDLRFAALVGGNSLEQQFELLGSNPDIVVATPGRLLHIMEEASLKLSM 172
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 173 VKCLVLDEADRLFELGL 189
>gi|71651136|ref|XP_814251.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70879209|gb|EAN92400.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 861
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +L KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E LKLS
Sbjct: 150 QILRFGIQLNKFLDLRFAALVGGNSLEQQFELLGSNPDIVVATPGRLLHIMEEASLKLSM 209
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 210 VKCLVLDEADRLFELGL 226
>gi|71649079|ref|XP_813297.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70878168|gb|EAN91446.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 903
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +L KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E LKLS
Sbjct: 192 QILRFGIQLNKFLDLRFAALVGGNSLEQQFELLGSNPDIVVATPGRLLHIMEEASLKLSM 251
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 252 VKCLVLDEADRLFELGL 268
>gi|407831412|gb|EKF98153.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 763
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F +L KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E LKLS
Sbjct: 52 QILRFGIQLDKFLDLRFAALVGGNSLEQQFELLGSNPDIVVATPGRLLHIMEEASLKLSM 111
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 112 VKCLVLDEADRLFELGL 128
>gi|323509361|dbj|BAJ77573.1| cgd3_2330 [Cryptosporidium parvum]
Length = 557
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT++ V++L T L L GG S+D QF L +PDIVVATPGR H ++E L L +
Sbjct: 90 QTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSGNPDIVVATPGRLFHHIIEAGLSLIA 149
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFEMG
Sbjct: 150 VKIIVLDEADRLFEMGL 166
>gi|126644777|ref|XP_001388110.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117338|gb|EAZ51438.1| hypothetical protein cgd3_2330 [Cryptosporidium parvum Iowa II]
Length = 862
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT++ V++L T L L GG S+D QF L +PDIVVATPGR H ++E L L +
Sbjct: 90 QTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSGNPDIVVATPGRLFHHIIEAGLSLIA 149
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFEMG
Sbjct: 150 VKIIVLDEADRLFEMGL 166
>gi|261327581|emb|CBH10557.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 843
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F ++ KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E L+LS
Sbjct: 111 QILRFGIQISKFLDLRFVALVGGNSLEQQFEMLASNPDIVVATPGRILHIMEEASLQLSM 170
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 171 VKSIVLDEADRLFELGL 187
>gi|72387978|ref|XP_844413.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62358560|gb|AAX79020.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
gi|70800946|gb|AAZ10854.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 843
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +F ++ KF L+ L+GG+S++ QF L ++PDIVVATPGR LHI+ E L+LS
Sbjct: 111 QILRFGIQISKFLDLRFVALVGGNSLEQQFEMLASNPDIVVATPGRILHIMEEASLQLSM 170
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADRLFE+G
Sbjct: 171 VKSIVLDEADRLFELGL 187
>gi|154336403|ref|XP_001564437.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061472|emb|CAM38500.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 803
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 25 LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDE 84
L +F L+ L+GGDSM+ QF L ++PD+VVATPGR LHI+ E L L+S++ +V DE
Sbjct: 115 LNRFLDLRFAALVGGDSMEQQFELLASNPDVVVATPGRLLHIMEEASLHLTSVRCLVLDE 174
Query: 85 ADRLFEMGF 93
ADRLFE+G
Sbjct: 175 ADRLFELGL 183
>gi|67598709|ref|XP_666233.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657185|gb|EAL36001.1| hypothetical protein Chro.30274, partial [Cryptosporidium hominis]
Length = 868
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT++ V++L T L L GG S+D QF L +PDIVVATPGR H ++E L L +
Sbjct: 90 QTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSGNPDIVVATPGRLFHHIIEAGLSLIA 149
Query: 77 IQYVVFDEADRLFEMGF 93
++ ++ DEADRLFEMG
Sbjct: 150 VKIIILDEADRLFEMGL 166
>gi|209880309|ref|XP_002141594.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209557200|gb|EEA07245.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 939
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 53/80 (66%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V QT++ V++ T ++ L GG S+D QF L +PDIV+ATPGR H +VE +L
Sbjct: 88 LVLQTYRVVRKFAIKTDIRICTLTGGSSLDRQFENLSGNPDIVIATPGRLCHHIVEAKLS 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+I +V DEADRLFE G
Sbjct: 148 LSAICMIVLDEADRLFETGL 167
>gi|242133498|gb|ACS87799.1| putative ATP-dependent RNA helicase [Crithidia sp. ATCC 30255]
Length = 885
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 25 LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDE 84
L KF L+ ++GGDS+D QF L ++PD+VVATPGR LHI+ E L L++++ +V DE
Sbjct: 183 LNKFMDLRFAAVVGGDSLDQQFELLASNPDLVVATPGRLLHIMEEASLHLTAVRCLVLDE 242
Query: 85 ADRLFEMGF 93
ADRLFE+G
Sbjct: 243 ADRLFELGL 251
>gi|223996771|ref|XP_002288059.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977175|gb|EED95502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 384
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 17 QTFKFVKELGKF----TKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-E 71
QT K ++ LG++ K + GG+SM+ QFA L + PDI+VATPGR H + E+ +
Sbjct: 97 QTLKVLRTLGQYCLNENKFNFIGINGGESMEKQFALLSSHPDIIVATPGRLSHHLSEIPD 156
Query: 72 LKLSSIQYVVFDEADRLFEMGFDVEQQSPCDT 103
L + + VVFDEADRLFEMGF ++ + C T
Sbjct: 157 FHLRNCEMVVFDEADRLFEMGFAMQLRQICST 188
>gi|159110427|ref|XP_001705473.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157433558|gb|EDO77799.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 900
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Query: 22 VKELGKFT--KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHI---VVEMELKLSS 76
+++L +FT +L+ L+GG++++ QF L A+PDI+V TPGR LHI V + +L S
Sbjct: 124 IRKLSRFTDPELRVCLLVGGEALEKQFTALTANPDIIVCTPGRILHIHDQVSTFKSQLKS 183
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
I+YV FDE+DR+FEM F +QQ
Sbjct: 184 IEYVCFDESDRMFEMNF--QQQ 203
>gi|308805432|ref|XP_003080028.1| Predicted ATP-dependent RNA helicase FAL1, involved in rRNA
maturation, DEAD-box superfamily (ISS) [Ostreococcus
tauri]
gi|116058487|emb|CAL53676.1| Predicted ATP-dependent RNA helicase FAL1, involved in rRNA
maturation, DEAD-box superfamily (ISS) [Ostreococcus
tauri]
Length = 1222
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 15 VQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LK 73
V+ TF F KEL KFT L+ L+GGDSM+ QFA L +PDI+VATPGR LH V E++
Sbjct: 539 VRGTFAFAKELSKFTNLRVAALVGGDSMEAQFADLSNNPDIIVATPGRLLHHVEEVKAFT 598
Query: 74 LSSIQYVVFDE 84
L ++ +VV DE
Sbjct: 599 LRTVCHVVLDE 609
>gi|452824107|gb|EME31112.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 763
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-L 72
+ QTF F K+ K T L++ L+GG+ ++QFA L +PD ++ATPGR L I+ ++ L
Sbjct: 126 LAMQTFGFFKKYAKGTNLKACLLVGGEPFESQFAALATNPDALIATPGRLLQILDQVSYL 185
Query: 73 KLSSIQYVVFDEADRLFE--MGFDVEQ 97
+L S++ +VFDEADRLFE +G + Q
Sbjct: 186 RLHSVETIVFDEADRLFEGNLGKNTRQ 212
>gi|253744188|gb|EET00428.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 900
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Query: 22 VKELGKFT--KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHI---VVEMELKLSS 76
+++L +FT +L+ L+GG++++ QF L A+PDI+V TPGR LHI + + +L S
Sbjct: 124 IRKLSRFTDPELRVCLLVGGEALERQFTALTANPDIIVCTPGRILHIHDQISTFKSQLKS 183
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YV FDE+DR+FEM F +QQ
Sbjct: 184 VEYVCFDESDRMFEMNF--QQQ 203
>gi|407043198|gb|EKE41803.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 684
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K ELGK T L+++ ++GG + +QF L + PDI+VATPGR I+ + L+
Sbjct: 97 QTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPDIIVATPGRLTFILEGANISLNR 156
Query: 77 IQYVVFDEADRLFEMGF 93
++ V FDEAD +FE GF
Sbjct: 157 VEMVCFDEADLMFESGF 173
>gi|67479813|ref|XP_655288.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472415|gb|EAL49901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703391|gb|EMD43850.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba
histolytica KU27]
Length = 684
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K ELGK T L+++ ++GG + +QF L + PDI+VATPGR I+ + L+
Sbjct: 97 QTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPDIIVATPGRLTFILEGANISLNR 156
Query: 77 IQYVVFDEADRLFEMGF 93
++ V FDEAD +FE GF
Sbjct: 157 VEMVCFDEADLMFESGF 173
>gi|167382487|ref|XP_001736127.1| DEAD box ATP-dependent RNA helicase [Entamoeba dispar SAW760]
gi|165901566|gb|EDR27644.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba dispar
SAW760]
Length = 684
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K ELGK T L+++ ++GG + +QF L + PDI+VATPGR I+ + L+
Sbjct: 97 QTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPDIIVATPGRLTFILEGANISLNR 156
Query: 77 IQYVVFDEADRLFEMGF 93
++ V FDEAD +FE GF
Sbjct: 157 VEMVCFDEADLMFESGF 173
>gi|308159948|gb|EFO62462.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 901
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 22 VKELGKFT--KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHI---VVEMELKLSS 76
+++L +FT +L+ L+GG++++ QF L A+PDI+V TPGR LHI V + +L S
Sbjct: 124 IRKLSRFTDPELRVCLLVGGEALEKQFTALTANPDIIVCTPGRILHIHDQVSTFKSQLKS 183
Query: 77 IQYVVFDEADRLFEMGF 93
I+YV FDE+DR+FEM F
Sbjct: 184 IEYVCFDESDRMFEMNF 200
>gi|118360242|ref|XP_001013358.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|89295125|gb|EAR93113.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 1130
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 27 KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEAD 86
KFT L T ++GG ++ QF L ++PDI++ATPGR ++ E +L L+ +++++FDE D
Sbjct: 394 KFTDLTYTLIVGGHGLEGQFESLASNPDIIIATPGRLSQLIDETDLSLNKVEFLIFDECD 453
Query: 87 RLFEMGF 93
LFEMGF
Sbjct: 454 YLFEMGF 460
>gi|390354880|ref|XP_003728430.1| PREDICTED: ATP-dependent RNA helicase DDX42-like
[Strongylocentrotus purpuratus]
Length = 892
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + VK+ GK + C GG +M Q P+++VATPGR + +V +
Sbjct: 238 LAQQIYMEVKKFGKAYNIHVVCAYGGGNMHEQQRACEEGPEVIVATPGRLIDLVKKKATN 297
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + Y++FDEADR+F+MGF+ + +S D
Sbjct: 298 LRRVSYLIFDEADRMFDMGFEPQVRSIAD 326
>gi|449018080|dbj|BAM81482.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 854
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLS 75
QTFKF+ E K+ +L++ L+GG+S++ QFA L +P+++VATPGR L ++ ++ L
Sbjct: 110 QTFKFLCEYAKYARLRAALLIGGESLEAQFAALAQNPEVLVATPGRLLQVLDQVPHFSLK 169
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
++ +V DEADRL+E E + D
Sbjct: 170 LLEIIVLDEADRLWEGNLASESRRILD 196
>gi|145532170|ref|XP_001451846.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419512|emb|CAK84449.1| unnamed protein product [Paramecium tetraurelia]
Length = 250
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
I LI P + Q +K L KF+ +Q + ++GG + QF L ++PDI++ TPG
Sbjct: 80 GIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNPDILICTPG 139
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L ++E LKLS +Q VV+DEAD LFEMG
Sbjct: 140 RVLQHLLEDRLKLSRVQMVVYDEADFLFEMGL 171
>gi|403223265|dbj|BAM41396.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 958
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 20 KFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 79
KF+ + +L+ L+GG S++ QF L +PDIV+ATPGR +VE LS I +
Sbjct: 113 KFINFSNQADRLRHATLIGGKSLETQFGSLSFNPDIVIATPGRLAQHLVEKSFSLSLINH 172
Query: 80 VVFDEADRLFEMGF 93
+V DEAD+LFEMGF
Sbjct: 173 LVIDEADKLFEMGF 186
>gi|390369825|ref|XP_792433.3| PREDICTED: ATP-dependent RNA helicase DDX42-like, partial
[Strongylocentrotus purpuratus]
Length = 242
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + VK+ GK + C GG +M Q P+++VATPGR + +V +
Sbjct: 56 LAQQIYMEVKKFGKAYNIHVVCAYGGGNMHEQQRACEEGPEVIVATPGRLIDLVKKKATN 115
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + Y++FDEADR+F+MGF+ + +S D
Sbjct: 116 LRRVSYLIFDEADRMFDMGFEPQVRSIAD 144
>gi|429334948|ref|ZP_19215595.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
gi|428760355|gb|EKX82622.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
Length = 439
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K ++ +FT ++S + GG+ Q A L PDI+V TPGR
Sbjct: 72 IRALILLPTRELAQQTLKEIERFAQFTFIKSGIITGGEDFKEQAAMLRKVPDILVGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
L + L L +Q VV DEADR+ +MGF DVE+
Sbjct: 132 MLEHLNAGNLDLEHVQVVVLDEADRMLDMGFAEDVER 168
>gi|388257169|ref|ZP_10134349.1| ATP-dependent RNA helicase RhlE [Cellvibrio sp. BR]
gi|387939373|gb|EIK45924.1| ATP-dependent RNA helicase RhlE [Cellvibrio sp. BR]
Length = 474
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q F+ V++ GK+ L+ST + GG S++ Q +L DI+VATPGR L +V + +
Sbjct: 101 LAAQVFESVRDYGKYLPLRSTVVFGGVSINPQMMKLRGGVDILVATPGRLLDLVNQNAVS 160
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L ++ +V DEADR+ +MGF
Sbjct: 161 LRQVEVLVLDEADRMLDMGF 180
>gi|219116929|ref|XP_002179259.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409150|gb|EEC49082.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 476
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKL 74
QQT + + +L T ++S + GG+ M+ QF +L + PD+++ATPGR H + E+ + KL
Sbjct: 101 QQTLRVMNKLAADTDIRSIGIHGGEGMEKQFNQLASKPDVIIATPGRLAHHLSEIPDFKL 160
Query: 75 SSIQYVVFDEADRLFEMGFDVE 96
+ + DEADRL EMGF ++
Sbjct: 161 AGCAMCILDEADRLLEMGFSMQ 182
>gi|145473681|ref|XP_001462504.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430344|emb|CAK95131.1| unnamed protein product [Paramecium tetraurelia]
Length = 706
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 6 INYLISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +K L KF+ +Q + ++GG + QF L ++PDI++ TPGR
Sbjct: 81 IRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNPDILICTPGR 140
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L ++E LKLS +Q V++DEAD LFEMG
Sbjct: 141 VLQHLLEDRLKLSRVQMVIYDEADFLFEMGL 171
>gi|325983695|ref|YP_004296097.1| DEAD/DEAH box helicase domain-containing protein [Nitrosomonas sp.
AL212]
gi|325533214|gb|ADZ27935.1| DEAD/DEAH box helicase domain protein [Nitrosomonas sp. AL212]
Length = 445
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q + V++ GK+ KL S ++GG +++ Q RL + DI+VATPGR
Sbjct: 78 IRALILVPTRELAAQVEESVRDYGKYLKLSSMMMIGGVNINPQITRLKSRVDILVATPGR 137
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L V + L LS I+ +V DEADR+ +MGF
Sbjct: 138 LLDHVQQKTLSLSQIEILVLDEADRMLDMGF 168
>gi|312797197|ref|YP_004030119.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
gi|312168972|emb|CBW75975.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
Length = 555
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 92 LAAQVEQSVREYGKYLKLRSTVMFGGVGINPQIDALRRGVDIVVATPGRLLDHLQQRTID 151
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LSS+Q +V DEADR+ +MGF
Sbjct: 152 LSSLQILVLDEADRMLDMGF 171
>gi|339481611|ref|YP_004693397.1| DEAD/DEAH box helicase domain-containing protein [Nitrosomonas sp.
Is79A3]
gi|338803756|gb|AEI99997.1| DEAD/DEAH box helicase domain protein [Nitrosomonas sp. Is79A3]
Length = 445
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q + V++ GK+ KL S ++GG +++ Q RL + DI+VATPGR
Sbjct: 78 IRALILVPTRELAAQVEESVRDYGKYLKLSSMIMIGGVNINPQITRLKSRVDILVATPGR 137
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L V + L LS I+ +V DEADR+ +MGF
Sbjct: 138 LLDHVQQKTLSLSHIEILVLDEADRMLDMGF 168
>gi|374287737|ref|YP_005034822.1| putative ATP-dependent RNA helicase [Bacteriovorax marinus SJ]
gi|301166278|emb|CBW25853.1| putative ATP-dependent RNA helicase [Bacteriovorax marinus SJ]
Length = 654
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQT KF +++G ++S+C++GG+ ++ Q L ++VATPGR + + E+
Sbjct: 89 LAQQTNKFFEQVGAELGIKSSCIIGGEKIEKQIEELKEGVHVLVATPGRLNDLTKQKEID 148
Query: 74 LSSIQYVVFDEADRLFEMGF--DVE 96
L++ VVFDEADRLF+MGF D+E
Sbjct: 149 LANCLAVVFDEADRLFDMGFKKDIE 173
>gi|409200280|ref|ZP_11228483.1| ATP-dependent RNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 411
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G ++ LI P + QQ + ++L T L CL GG ++ Q RL A D+VVA
Sbjct: 70 GEKSVKALILTPTRELAQQVAEHTEKLVVNTSLNVVCLYGGANIGPQEKRLRAGVDVVVA 129
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L +++ L L +IQ++VFDEADR+ +MGF
Sbjct: 130 TPGRLLDHLIKGTLTLKNIQHLVFDEADRMLDMGF 164
>gi|428173676|gb|EKX42577.1| hypothetical protein GUITHDRAFT_46749, partial [Guillardia theta
CCMP2712]
Length = 385
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEME-LKLS 75
QTF F K K+T+L + ++GG++++ QFA L +P++V+ATPGR L ++ E+ L
Sbjct: 98 QTFNFFKSYAKYTQLTACLIVGGEALEPQFAALATNPNVVIATPGRLLQLLNEVRTFSLK 157
Query: 76 SIQYVVFDEADRLFE 90
++ V DEADRLFE
Sbjct: 158 GVRVCVLDEADRLFE 172
>gi|392542118|ref|ZP_10289255.1| ATP-dependent RNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 411
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G ++ LI P + QQ + ++L T L CL GG ++ Q RL A D+VVA
Sbjct: 70 GEKSVRALILTPTRELAQQVAEHTEKLVVNTSLNVVCLYGGANIGPQEKRLRAGVDVVVA 129
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L +++ L L +IQ++VFDEADR+ +MGF
Sbjct: 130 TPGRLLDHLIKGTLTLKNIQHLVFDEADRMLDMGF 164
>gi|442609095|ref|ZP_21023836.1| ATP-dependent RNA helicase VCA0768 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
gi|441749707|emb|CCQ09898.1| ATP-dependent RNA helicase VCA0768 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
Length = 409
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K +EL T+L+ L GG ++ Q RL DIVVATPGR L +++ L
Sbjct: 83 LAQQIVKHGEELAAKTELRFVLLQGGANIGPQCERLAQGVDIVVATPGRLLDHLIKGSLS 142
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS+I+ VV+DEADRL +MGF E Q
Sbjct: 143 LSAIETVVYDEADRLLDMGFKDEIQ 167
>gi|332529812|ref|ZP_08405766.1| dead/deah box helicase domain protein [Hylemonella gracilis ATCC
19624]
gi|332040833|gb|EGI77205.1| dead/deah box helicase domain protein [Hylemonella gracilis ATCC
19624]
Length = 565
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+ST + GG M+ Q AR+ DI+VATPGR L + + +
Sbjct: 89 LAAQVEESVRNYGKYLQLESTVIFGGVGMNPQIARVKKGVDILVATPGRLLDLQQQGFMD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 149 LSQVQMLVLDEADRMLDMGF 168
>gi|421529828|ref|ZP_15976345.1| DEAD/DEAH box helicase [Pseudomonas putida S11]
gi|402212689|gb|EJT84069.1| DEAD/DEAH box helicase [Pseudomonas putida S11]
Length = 415
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 47 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 106
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 107 LLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 145
>gi|88858341|ref|ZP_01132983.1| putative ATP-dependent RNA helicase (rhlE-like); DEAD-box protein
family protein [Pseudoalteromonas tunicata D2]
gi|88819958|gb|EAR29771.1| putative ATP-dependent RNA helicase (rhlE-like); DEAD-box protein
family protein [Pseudoalteromonas tunicata D2]
Length = 413
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ F ++ G+ ++L + GG S+ Q + A DI+VATPGR L +V+ +
Sbjct: 84 LAQQVFASFEKYGQHSELTAALAYGGVSIGEQIKAIKAGVDIMVATPGRLLDHLVKGTVN 143
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++QY+VFDEADR+ +MGF
Sbjct: 144 LSNVQYLVFDEADRMLDMGF 163
>gi|332025702|gb|EGI65860.1| ATP-dependent RNA helicase DDX42 [Acromyrmex echinatior]
Length = 752
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ K+ GK +Q C GG S Q L + +IVVATPGR + +V L+
Sbjct: 325 QQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATNLT 384
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 385 RVTFLVLDEADRMFDMGFEPQVRSICN 411
>gi|322799398|gb|EFZ20748.1| hypothetical protein SINV_08125 [Solenopsis invicta]
Length = 764
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ K+ GK +Q C GG S Q L + +IVVATPGR + +V L+
Sbjct: 341 QQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATNLT 400
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 401 RVTFLVLDEADRMFDMGFEPQVRSICN 427
>gi|440800980|gb|ELR22005.1| DEAD box RNA helicase [Acanthamoeba castellanii str. Neff]
Length = 596
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT + ELG +S C+ GG S D Q L IVVATPGR L +V + L
Sbjct: 265 LAMQTAEVAVELGSACNAKSICIYGGVSKDAQVRELRGGVQIVVATPGRLLDLVNDGALT 324
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L+S+ Y+V DEADR+ ++GF+
Sbjct: 325 LASVDYIVLDEADRMLDLGFE 345
>gi|399217305|emb|CCF73992.1| unnamed protein product [Babesia microti strain RI]
Length = 903
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 9 LISFPIVQQTFKFVKELGKF---TKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + + + VK L K L+ CL+GG ++ QF+ L +PDI++ATPGR H
Sbjct: 147 LIILPTRELSLQIVKVLRKLMVKNDLKIACLIGGQGIETQFSALANNPDILIATPGRLAH 206
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
+VE L+L ++ V DEAD+L E GF
Sbjct: 207 HLVEKSLQLVRVEIFVLDEADKLCEDGF 234
>gi|398844840|ref|ZP_10601893.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
gi|398254166|gb|EJN39270.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
Length = 440
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 72 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 132 LLEQLNAGNLDLSHVQVMILDEADRMLDMGFAEDMERLC 170
>gi|26991217|ref|NP_746642.1| DEAD/DEAH box helicase [Pseudomonas putida KT2440]
gi|397696842|ref|YP_006534725.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|421524014|ref|ZP_15970641.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
gi|24986267|gb|AAN70106.1|AE016650_5 ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida
KT2440]
gi|397333572|gb|AFO49931.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|402752259|gb|EJX12766.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
Length = 440
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 72 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 132 LLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 170
>gi|339488772|ref|YP_004703300.1| DEAD/DEAH box helicase [Pseudomonas putida S16]
gi|338839615|gb|AEJ14420.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida S16]
Length = 440
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 72 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 132 LLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 170
>gi|431803785|ref|YP_007230688.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
gi|430794550|gb|AGA74745.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
Length = 440
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 72 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 132 LLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 170
>gi|148546618|ref|YP_001266720.1| DEAD/DEAH box helicase [Pseudomonas putida F1]
gi|395447873|ref|YP_006388126.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
gi|148510676|gb|ABQ77536.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida F1]
gi|388561870|gb|AFK71011.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
Length = 453
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 85 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 144
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 145 LLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 183
>gi|434406298|ref|YP_007149183.1| DNA/RNA helicase, superfamily II [Cylindrospermum stagnale PCC
7417]
gi|428260553|gb|AFZ26503.1| DNA/RNA helicase, superfamily II [Cylindrospermum stagnale PCC
7417]
Length = 470
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
GF I LI P + Q + V+E GK+ L S + GG ++++Q RL DI+VA
Sbjct: 75 GFPPIRALILTPTRELAAQVEESVREYGKYLNLNSMVMFGGVNINSQKRRLKGRVDILVA 134
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + + LS ++ +V DEADR+ +MGF
Sbjct: 135 TPGRLLDHVQQGTVNLSRVEVLVLDEADRMLDMGF 169
>gi|89900953|ref|YP_523424.1| DEAD/DEAH box helicase-like protein [Rhodoferax ferrireducens T118]
gi|89345690|gb|ABD69893.1| DEAD/DEAH box helicase-like [Rhodoferax ferrireducens T118]
Length = 574
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L ST + GG M+ Q +R+ DI+VATPGR L ++ + L
Sbjct: 89 LAAQVEESVQTYGKYVELTSTVIFGGVGMNPQISRVKKGVDILVATPGRLLDLLQQGVLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 149 LSQVQILVLDEADRMLDMGF 168
>gi|397640887|gb|EJK74372.1| hypothetical protein THAOC_03953 [Thalassiosira oceanica]
Length = 1035
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 38 GGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-ELKLSSIQYVVFDEADRLFEMGFDVE 96
GG+SM+ QF+ L PD++VATPGR H + E+ + L + VVFDEADRLFEMGF ++
Sbjct: 132 GGESMEKQFSLLAGHPDVIVATPGRLSHHLSEIPDFHLRQCEVVVFDEADRLFEMGFAMQ 191
Query: 97 QQSPC 101
+ C
Sbjct: 192 LRQIC 196
>gi|386010970|ref|YP_005929247.1| DEAD/DEAH box helicase [Pseudomonas putida BIRD-1]
gi|313497676|gb|ADR59042.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida BIRD-1]
Length = 440
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + QQT K V+ +FT +++ + GG+ Q A L PD+++
Sbjct: 68 GRVEIRSLILLPTRELAQQTLKQVQLFSQFTYVKAGLVTGGEDFKEQAAMLRKVPDVLIG 127
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
TPGR L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 128 TPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 170
>gi|344337581|ref|ZP_08768515.1| DEAD/DEAH box helicase domain protein [Thiocapsa marina 5811]
gi|343802534|gb|EGV20474.1| DEAD/DEAH box helicase domain protein [Thiocapsa marina 5811]
Length = 462
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q LG +T+L + + GGDS +Q A L +P+I+VATPGR L ++ E
Sbjct: 86 LARQIHVHFTRLGSYTRLNNGVITGGDSKAHQIATLRKNPEILVATPGRLLELLETGEAD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 146 LSDLEILVLDEADRMLDMGF 165
>gi|167622911|ref|YP_001673205.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167352933|gb|ABZ75546.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 432
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G +N LI P + Q + + K+ ++ +LGG MD+Q +L DI++A
Sbjct: 71 GRSNARALILTPTRELAAQIADNINDYAKYLDMKVVTVLGGVKMDSQATKLKRGADIIIA 130
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
TPGR L +V L LS++ ++V DEADR+ +MGF + Q
Sbjct: 131 TPGRLLEHIVACNLSLSNVDFLVLDEADRMLDMGFSADIQ 170
>gi|56477991|ref|YP_159580.1| ATP-dependent RNA helicase [Aromatoleum aromaticum EbN1]
gi|56314034|emb|CAI08679.1| ATP-dependent RNA helicase [Aromatoleum aromaticum EbN1]
Length = 491
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q F+ VK K+ L+STC+ GG M Q L +IVVATPGR L V + ++
Sbjct: 89 LAMQVFESVKTYSKYVPLRSTCIYGGVDMKPQIQDLRNGIEIVVATPGRLLDHVQQKTIQ 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L ++ +V DEADR+ +MGF
Sbjct: 149 LGQVEMLVLDEADRMLDMGF 168
>gi|325273395|ref|ZP_08139652.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
gi|324101468|gb|EGB99057.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
Length = 426
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + QQT K V+ +FT +++ + GG+ Q A L PD+++
Sbjct: 81 GRVEIRSLILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRKVPDVLIG 140
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
TPGR L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 141 TPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLC 183
>gi|4104820|gb|AAD02177.1| RNA helicase [Anabaena variabilis]
Length = 425
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 3 FANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVAT 59
F I LI P + Q V++ GK+ KL S + GG S++ Q RL DI+VAT
Sbjct: 74 FLTIRALILTPTRELAAQVESSVRDYGKYLKLNSMVMFGGVSINPQKQRLKGRVDILVAT 133
Query: 60 PGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
PGR L V + + LS I+ +V DEADR+ +MGF
Sbjct: 134 PGRLLDHVQQGTVNLSQIEILVLDEADRMLDMGF 167
>gi|392404056|ref|YP_006440668.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
gi|390612010|gb|AFM13162.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
Length = 424
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + + LGK T+LQS + GG SM+ Q L DIVVA PGR L + L
Sbjct: 83 LAEQIHQVIVTLGKDTRLQSMTIYGGASMNRQLGELRKGVDIVVACPGRLLDHLQRKSLT 142
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++ +V DEAD++F+MGF
Sbjct: 143 LDAVETLVLDEADQMFDMGF 162
>gi|443706339|gb|ELU02447.1| hypothetical protein CAPTEDRAFT_155002 [Capitella teleta]
Length = 806
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++ K+ GK ++ C GG SM Q P+I+V TPGR + +V +
Sbjct: 297 LSQQIYQEAKKFGKVYNIKVVCAYGGGSMWEQIKACEECPEIIVCTPGRMIDLVRKKATN 356
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L Y+VFDEADR+F+MGF+ + +S
Sbjct: 357 LLRTTYLVFDEADRMFDMGFETQVRS 382
>gi|123478847|ref|XP_001322584.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121905433|gb|EAY10361.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 703
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + ++ T L+ ++GG+++ QF L +PD+++ATPGR L I+ E + LS
Sbjct: 85 QTGHYFQKYASQTNLKCAQIIGGEALPPQFESLTKNPDVIIATPGRLLQIIAETQYSLSR 144
Query: 77 IQYVVFDEADRLFEMGFD 94
+Q +V DEAD LFE G +
Sbjct: 145 VQIIVIDEADLLFEQGLE 162
>gi|262369669|ref|ZP_06062997.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
gi|381196601|ref|ZP_09903943.1| ATP-dependent RNA helicase RhlB [Acinetobacter lwoffii WJ10621]
gi|262315737|gb|EEY96776.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
Length = 383
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ PI +Q ++ KEL KF+ L LLGG D Q
Sbjct: 62 INDLLNNPIQEQRYRGEPRALILAPTRELALQIESDAKELTKFSDLHVVTLLGGVDFDKQ 121
Query: 46 FARLHASP-DIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
A+L P DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 122 KAQLDKKPVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 170
>gi|383784621|ref|YP_005469191.1| DEAD/DEAH box helicase [Leptospirillum ferrooxidans C2-3]
gi|383083534|dbj|BAM07061.1| putative DEAD/DEAH box helicase domain protein [Leptospirillum
ferrooxidans C2-3]
Length = 437
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V E GK KL ST + GG S++ Q +L DI+VATPGR L V + L
Sbjct: 89 LAAQVEESVVEYGKHMKLSSTVIFGGVSINPQIQKLRTGVDILVATPGRLLDHVQQRTLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHVEILVLDEADRMLDMGF 168
>gi|307190551|gb|EFN74538.1| ATP-dependent RNA helicase DDX42 [Camponotus floridanus]
Length = 769
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++ K+ GK +Q C GG S Q L + +IVVATPGR + +V
Sbjct: 339 LSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATN 398
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L+ + ++V DEADR+F+MGF+ + +S C+
Sbjct: 399 LTRVTFLVLDEADRMFDMGFEPQVRSICN 427
>gi|389720718|ref|ZP_10187537.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
gi|388609402|gb|EIM38574.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
Length = 383
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMELKLSSIQYVVF 82
EL KFT L LLGG D Q A+L +P DI+VATPGR + V + E+ L I+++V
Sbjct: 100 ELNKFTDLSVVTLLGGVDFDKQKAQLDKAPVDIMVATPGRLIDFVEQKEVWLDQIEFLVI 159
Query: 83 DEADRLFEMGF 93
DEADRL +MGF
Sbjct: 160 DEADRLLDMGF 170
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ ++ GK +Q C GG S Q L +IVVATPGR + +V L+
Sbjct: 342 QQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLT 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|340723638|ref|XP_003400196.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus
terrestris]
Length = 774
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ ++ GK +Q C GG S Q L +IVVATPGR + +V L+
Sbjct: 342 QQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLT 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|409422710|ref|ZP_11259795.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
HYS]
Length = 441
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I L+ P + QQT K V+ +FT +++ + GG+ Q A L PD+++ TPGR
Sbjct: 72 IRALVLLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKEQAAMLRKVPDVLIGTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
L + L L +Q +V DEADR+ +MGF DVE+
Sbjct: 132 LLEQLNAGNLHLEHVQVIVLDEADRMLDMGFAEDVER 168
>gi|154416622|ref|XP_001581333.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121915559|gb|EAY20347.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 541
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 52/82 (63%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F+ ++ K T L++TC+ GG + Q L DIV+ATPGR + I+ + + LS
Sbjct: 206 QIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSE 265
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
+++++ DEADR+ +MGF+ + Q
Sbjct: 266 VRFLILDEADRMLDMGFEPQMQ 287
>gi|383857449|ref|XP_003704217.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Megachile
rotundata]
Length = 774
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ ++ GK +Q C GG S Q L +IVVATPGR + +V L+
Sbjct: 342 QQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLT 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|398808043|ref|ZP_10566913.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
gi|398088674|gb|EJL79232.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
Length = 600
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I L+ P + Q + V+ GK+ +L ST + GG M+ Q ++L DI+VA
Sbjct: 74 GGTGIRALVLTPTRELAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQISKLKKGVDILVA 133
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + L LS +Q ++ DEADR+ +MGF
Sbjct: 134 TPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGF 168
>gi|380022612|ref|XP_003695134.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX42-like [Apis florea]
Length = 772
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ ++ GK +Q C GG S Q L +IVVATPGR + +V L+
Sbjct: 342 QQIYQEARKFGKVYNVQVCCCYGGGSKWEQXKALEGGAEIVVATPGRIIDLVKMKATNLT 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|170722989|ref|YP_001750677.1| DEAD/DEAH box helicase [Pseudomonas putida W619]
gi|169760992|gb|ACA74308.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida W619]
Length = 452
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT +++ + GG+ Q A L PD+++ TPGR
Sbjct: 85 IRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 144
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS +Q ++ DEADR+ +MGF + + C
Sbjct: 145 LLEQLNAGNLDLSHVQVMILDEADRMLDMGFAEDMERLC 183
>gi|319794896|ref|YP_004156536.1| dead/deah box helicase domain-containing protein [Variovorax
paradoxus EPS]
gi|315597359|gb|ADU38425.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus EPS]
Length = 605
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L ST + GG M+ Q ++L DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQISKLKKGVDILVATPGRLLDLQQQGMLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q ++ DEADR+ +MGF
Sbjct: 149 LSQVQMLILDEADRMLDMGF 168
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K+ GK + C GG SM Q +I+VATPGR + +V +
Sbjct: 382 LSQQIYHEAKKFGKVYNINVVCAYGGGSMWEQTKACQEGAEIIVATPGRLIDLVKKRATN 441
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 442 LERVTYLVFDEADRMFDMGFEPQVRS 467
>gi|402700606|ref|ZP_10848585.1| DEAD/DEAH box helicase [Pseudomonas fragi A22]
Length = 448
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R L + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RLLEQLNAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVD 171
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ + K+ GK ++ C GG S Q L + +IVVATPGR + +V LS
Sbjct: 342 QQIYHEAKKFGKVYNIRVCCCYGGGSKWEQSKALESGAEIVVATPGRIIDLVKMKATNLS 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|85000347|ref|XP_954892.1| ATP-dependent (RNA) helicase [Theileria annulata strain Ankara]
gi|65303038|emb|CAI75416.1| ATP-dependent (RNA) helicase, putative [Theileria annulata]
Length = 811
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 50/74 (67%)
Query: 20 KFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQY 79
KFV + L+ L+GG S+++QF L +PDIV+ATPGR ++ + + L LS + +
Sbjct: 102 KFVNFSNQSDALRVVLLIGGKSVESQFGALSFNPDIVIATPGRLVYHLEQKSLSLSLVTH 161
Query: 80 VVFDEADRLFEMGF 93
+V DEAD+LFEMGF
Sbjct: 162 LVIDEADKLFEMGF 175
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ ++ GK +Q C GG S Q L +IVVATPGR + +V L+
Sbjct: 342 QQIYQEARKFGKVYNVQVCCCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLT 401
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F+MGF+ + +S C+
Sbjct: 402 RVTFLVLDEADRMFDMGFEPQVRSICN 428
>gi|239816654|ref|YP_002945564.1| DEAD/DEAH box helicase domain-containing protein [Variovorax
paradoxus S110]
gi|239803231|gb|ACS20298.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus S110]
Length = 601
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L ST + GG M+ Q ++L DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVRTYGKYLELDSTVIFGGVGMNPQISKLKKGVDILVATPGRLLDLQQQGMLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q ++ DEADR+ +MGF
Sbjct: 149 LSQVQMLILDEADRMLDMGF 168
>gi|148725135|emb|CAN84995.1| ATP-dependent RNA helicase DeaD [Shewanella piezotolerans WP3]
Length = 144
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + Q K V E G T L+S + GG S+D Q + L A DIVVATPG
Sbjct: 20 SIRALILVPTRELAVQVNKSVTEYGVNTALKSMVIYGGVSIDAQASSLAAGVDIVVATPG 79
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L + L L +I +VFDEADR+ +MGF
Sbjct: 80 RLLDHLRRGSLSLMAIDTLVFDEADRMLDMGF 111
>gi|395007602|ref|ZP_10391321.1| DNA/RNA helicase, superfamily II, partial [Acidovorax sp. CF316]
gi|394314410|gb|EJE51333.1| DNA/RNA helicase, superfamily II, partial [Acidovorax sp. CF316]
Length = 575
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVREYGKYLDINSTVVFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++Q +V DEADR+ +MGF
Sbjct: 149 LSTVQVLVLDEADRMLDMGF 168
>gi|351729711|ref|ZP_08947402.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 617
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 95 LAAQVEESVREYGKYLDINSTVVFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLD 154
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++Q +V DEADR+ +MGF
Sbjct: 155 LSTVQVLVLDEADRMLDMGF 174
>gi|153207356|ref|ZP_01946093.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii 'MSU
Goat Q177']
gi|161830442|ref|YP_001596593.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA
331]
gi|165918485|ref|ZP_02218571.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii Q321]
gi|120576665|gb|EAX33289.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii 'MSU
Goat Q177']
gi|161762309|gb|ABX77951.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA
331]
gi|165917853|gb|EDR36457.1| putative ATP-dependent RNA helicase rhlE [Coxiella burnetii Q321]
Length = 411
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F+ V+ GK+ L++T + GG S+ Q L DI+VATPGR L +V + L LS
Sbjct: 92 QVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSR 151
Query: 77 IQYVVFDEADRLFEMGF 93
+++ V DEADR+ +MGF
Sbjct: 152 VEFFVLDEADRMLDMGF 168
>gi|209363862|ref|YP_001424084.2| ATP-dependent RNA helicase [Coxiella burnetii Dugway 5J108-111]
gi|212212853|ref|YP_002303789.1| ATP-dependent RNA helicase [Coxiella burnetii CbuG_Q212]
gi|212219099|ref|YP_002305886.1| ATP-dependent RNA helicase [Coxiella burnetii CbuK_Q154]
gi|215919015|ref|NP_819700.2| ATP-dependent RNA helicase rhlE [Coxiella burnetii RSA 493]
gi|206583900|gb|AAO90214.2| ATP-dependent RNA helicase [Coxiella burnetii RSA 493]
gi|207081795|gb|ABS77088.2| ATP-dependent RNA helicase [Coxiella burnetii Dugway 5J108-111]
gi|212011263|gb|ACJ18644.1| ATP-dependent RNA helicase [Coxiella burnetii CbuG_Q212]
gi|212013361|gb|ACJ20741.1| ATP-dependent RNA helicase [Coxiella burnetii CbuK_Q154]
Length = 420
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F+ V+ GK+ L++T + GG S+ Q L DI+VATPGR L +V + L LS
Sbjct: 101 QVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSR 160
Query: 77 IQYVVFDEADRLFEMGF 93
+++ V DEADR+ +MGF
Sbjct: 161 VEFFVLDEADRMLDMGF 177
>gi|428296967|ref|YP_007135273.1| DEAD/DEAH box helicase [Calothrix sp. PCC 6303]
gi|428233511|gb|AFY99300.1| DEAD/DEAH box helicase domain protein [Calothrix sp. PCC 6303]
Length = 489
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G+ I LI P + Q + V + GK+ L+S + GG S++ Q RL DI+VA
Sbjct: 106 GYPRIRALILTPTRELAAQVQESVHDYGKYLNLRSMAMFGGVSINPQKQRLRNGVDILVA 165
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + + LS I+ +V DEADR+ +MGF
Sbjct: 166 TPGRLLDHVQQGTVNLSGIEVLVLDEADRMLDMGF 200
>gi|186683738|ref|YP_001866934.1| DEAD/DEAH box helicase [Nostoc punctiforme PCC 73102]
gi|186466190|gb|ACC81991.1| DEAD/DEAH box helicase domain protein [Nostoc punctiforme PCC
73102]
Length = 443
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G+ I LI P + Q + V+E GK+ +L S + GG ++ Q RL DI+VA
Sbjct: 75 GYRPIRALILTPTRELAAQVEESVREYGKYLQLNSMVMFGGVGINLQKQRLKNRVDILVA 134
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + L LS I+ +V DEADR+ +MGF
Sbjct: 135 TPGRLLDHVQQGTLNLSHIEVLVLDEADRMLDMGF 169
>gi|340506877|gb|EGR32929.1| hypothetical protein IMG5_066580 [Ichthyophthirius multifiliis]
Length = 847
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 9 LISFPIVQ---QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + Q +K KFT L + L+GG +++ QF L +PDI++ TPGR
Sbjct: 85 LIVLPTRELALQITSVLKSFIKFTDLTYSLLVGGHNLEGQFESLAGNPDILIVTPGRLSQ 144
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
++ E L L+ +++++FDE D LFEMGF
Sbjct: 145 LIDETGLTLNKVEFLIFDECDYLFEMGF 172
>gi|428671631|gb|EKX72549.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 773
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 9 LISFPIVQQTFKFVKE-LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIV 67
L S + Q VK+ +GK L+ L+GG +++ QF L +PDIV+ATPGR +
Sbjct: 102 LPSRELALQVASVVKKFVGKTDGLRHATLIGGQALETQFGSLAFNPDIVIATPGRLSQHL 161
Query: 68 VEMELKLSSIQYVVFDEADRLFEMGF 93
VE +S +++ V DEAD+LFEMGF
Sbjct: 162 VEKSFDMSLLEHFVIDEADKLFEMGF 187
>gi|209876744|ref|XP_002139814.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209555420|gb|EEA05465.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 942
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 5 NINYLISFPIVQ------QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
NI+Y+ + IV Q +K K L KL ST + GG S+ NQ +L + DIVV
Sbjct: 294 NIHYVTALIIVPTRELALQVYKQTKILSNIVKLNSTVICGGFSISNQLNKLRSGCDIVVC 353
Query: 59 TPGRFLHIVVEMELKLSSIQ---YVVFDEADRLFEMGF 93
TPGRF+ I+ ++S Q Y+V DE DRL +MGF
Sbjct: 354 TPGRFIDIISLNYKRVSVFQYISYIVIDEGDRLLDMGF 391
>gi|104782944|ref|YP_609442.1| DEAD/DEAH box helicase [Pseudomonas entomophila L48]
gi|95111931|emb|CAK16656.1| putative ATP-dependent RNA helicase, DEAD box family [Pseudomonas
entomophila L48]
Length = 454
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPGR
Sbjct: 85 IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKVPDVLIGTPGR 144
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
L + L LS ++ ++ DEADR+ +MGF + + C
Sbjct: 145 LLEQLNAGNLDLSHVKVLILDEADRMLDMGFAEDMERLC 183
>gi|365089869|ref|ZP_09328377.1| DEAD/DEAH box helicase domain-containing protein, partial
[Acidovorax sp. NO-1]
gi|363416562|gb|EHL23666.1| DEAD/DEAH box helicase domain-containing protein, partial
[Acidovorax sp. NO-1]
Length = 441
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVREYGKYLDINSTVVFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++Q +V DEADR+ +MGF
Sbjct: 149 LSTVQVLVLDEADRMLDMGF 168
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K GK L+S C GG +M Q L +IVVATPGR + V +
Sbjct: 328 LCQQIYFECKRFGKVYGLRSVCCYGGGNMHEQQKGLSDGCEIVVATPGRIIDHVKKKNTN 387
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+FEMGF+ + +S
Sbjct: 388 LLRVTYLVFDEADRMFEMGFEYQVRS 413
>gi|416240176|ref|ZP_11632291.1| ATP-dependent RNA helicase RhlB, partial [Moraxella catarrhalis
BC1]
gi|326566475|gb|EGE16625.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BC1]
Length = 380
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMEL 72
+ QQ +EL +F++L + C+ GG D Q +LH P DI++ TPGR + V + EL
Sbjct: 96 LAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGEL 155
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ V DEADR+ +MGF
Sbjct: 156 FLDRVEVFVLDEADRMLDMGF 176
>gi|358636156|dbj|BAL23453.1| ATP-dependent RNA helicase [Azoarcus sp. KH32C]
Length = 480
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q F+ VK K+ L++TC+ GG M Q L +IVVATPGR L V + +
Sbjct: 89 LAMQVFESVKTYSKYVPLRTTCIYGGVDMKPQIQELRNGVEIVVATPGRLLDHVQQKTIV 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+ ++ +V DEADR+ +MGF
Sbjct: 149 LNQVEMLVLDEADRMLDMGF 168
>gi|392548564|ref|ZP_10295701.1| ATP-dependent RNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 407
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + +L++ CL GG ++ Q L DIVVATPGR L +++ L
Sbjct: 82 LAQQVAQHANTYAAHCELKTVCLHGGANIGPQEKALREGADIVVATPGRLLDHLIKGTLN 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++Y+VFDEADR+ +MGF
Sbjct: 142 LSAVEYLVFDEADRMLDMGF 161
>gi|296113215|ref|YP_003627153.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis RH4]
gi|416158006|ref|ZP_11605445.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 101P30B1]
gi|416217883|ref|ZP_11624551.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 7169]
gi|416223681|ref|ZP_11626426.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 103P14B1]
gi|416232458|ref|ZP_11628949.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 12P80B1]
gi|416247043|ref|ZP_11635412.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BC8]
gi|416255160|ref|ZP_11639036.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis O35E]
gi|421780028|ref|ZP_16216518.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis RH4]
gi|295920909|gb|ADG61260.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BBH18]
gi|326560208|gb|EGE10596.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 7169]
gi|326562767|gb|EGE13063.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 103P14B1]
gi|326567877|gb|EGE17978.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 12P80B1]
gi|326570281|gb|EGE20326.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BC8]
gi|326573316|gb|EGE23284.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis 101P30B1]
gi|326576868|gb|EGE26774.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis O35E]
gi|407812822|gb|EKF83606.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis RH4]
Length = 391
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMEL 72
+ QQ +EL +F++L + C+ GG D Q +LH P DI++ TPGR + V + EL
Sbjct: 96 LAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGEL 155
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ V DEADR+ +MGF
Sbjct: 156 FLDRVEVFVLDEADRMLDMGF 176
>gi|156083018|ref|XP_001608993.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796243|gb|EDO05425.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 783
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 17 QTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
Q +K+ FTK L+S L+GG+S++ QF L +PD+VVATPGR + E +
Sbjct: 108 QVSSVLKKFIAFTKRDDALRSATLIGGESVEGQFGALTFNPDLVVATPGRLSQHIAEKSI 167
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L+ + + V DEAD+LFEMGF
Sbjct: 168 DLTLVTHFVIDEADKLFEMGF 188
>gi|90578695|ref|ZP_01234505.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
gi|90439528|gb|EAS64709.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
Length = 427
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
NI LI P + QQ + + K+T+++ GG SM+ Q L+A +I+VATPG
Sbjct: 86 NIRALILTPTRELAQQVYDSITTYAKYTEIKVAVAYGGTSMNVQVKALNAGAEILVATPG 145
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
R L V + LS ++ V DEADR+ +MGF V+ Q
Sbjct: 146 RLLDHVFNGSVSLSEVETFVLDEADRMLDMGFIVDIQ 182
>gi|260223291|emb|CBA33706.1| Putative ATP-dependent RNA helicase rhlE [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 608
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I L+ P + Q + V++ GK+ +L ST + GG M+ Q +++ DI+VA
Sbjct: 94 GGTGIRALVLTPTRELAAQVEESVRQYGKYLQLSSTVVFGGVGMNPQISKVKKGVDILVA 153
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + L L +Q +V DEADR+ +MGF
Sbjct: 154 TPGRLLDLAQQGMLDLGQVQMLVLDEADRMLDMGF 188
>gi|167035034|ref|YP_001670265.1| DEAD/DEAH box helicase [Pseudomonas putida GB-1]
gi|166861522|gb|ABY99929.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida GB-1]
Length = 453
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + QQT K V+ +FT +++ + GG+ Q A L PD+++
Sbjct: 81 GRVEIRSLILLPTRELAQQTLKQVQLFSQFTYVKAGLVTGGEDFKEQAAMLRKVPDVLIG 140
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPC 101
TPGR L + L LS ++ ++ DEADR+ +MGF + + C
Sbjct: 141 TPGRLLEQLNAGNLDLSHVKVLILDEADRMLDMGFAEDMERLC 183
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK +FT L+ST + GG M Q A L A +IV+ATPGR L V + +
Sbjct: 104 LADQVAENVKAYSRFTPLRSTVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHVQQKTVN 163
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS Q +V DEADR+ +MGF
Sbjct: 164 LSQTQILVMDEADRMLDMGF 183
>gi|440684899|ref|YP_007159694.1| DEAD/DEAH box helicase domain protein [Anabaena cylindrica PCC
7122]
gi|428682018|gb|AFZ60784.1| DEAD/DEAH box helicase domain protein [Anabaena cylindrica PCC
7122]
Length = 450
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MGFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVV 57
+G+ I LI P + Q + V + GK+ KL+ST + GG S++ Q +L + DI+V
Sbjct: 74 IGWLPIRALILTPTRELAAQVEESVHDYGKYLKLKSTVVFGGVSINPQKRQLKSGVDILV 133
Query: 58 ATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
ATPGR L + + + LS I+ +V DEADR+ +MGF
Sbjct: 134 ATPGRLLDHLQQGTVNLSRIEILVLDEADRMLDMGF 169
>gi|416249616|ref|ZP_11636713.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis CO72]
gi|326575788|gb|EGE25711.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis CO72]
Length = 391
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMEL 72
+ QQ +EL +F++L + C+ GG D Q +LH P DI++ TPGR + V + EL
Sbjct: 96 LAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVDKGEL 155
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ V DEADR+ +MGF
Sbjct: 156 FLDRVEVFVLDEADRMLDMGF 176
>gi|121611662|ref|YP_999469.1| DEAD/DEAH box helicase domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121556302|gb|ABM60451.1| DEAD/DEAH box helicase domain protein [Verminephrobacter eiseniae
EF01-2]
Length = 581
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M Q RL DI+VATPGR L + + +
Sbjct: 89 LAAQVEESVREYGKYLAIDSTVVFGGVGMAPQIERLQRGVDILVATPGRLLDLQQQGFVD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+S+Q +V DEADR+ +MGF
Sbjct: 149 LASVQVLVLDEADRMLDMGF 168
>gi|74317751|ref|YP_315491.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
gi|74057246|gb|AAZ97686.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
Length = 477
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK GK+ L S + GG +++ QF L A DI+VATPGR L V + +
Sbjct: 91 LAAQVEESVKTYGKYLSLTSMVMFGGVNINPQFKALKARVDILVATPGRLLDHVAQKTVD 150
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 151 LSGVEILVLDEADRMLDMGF 170
>gi|113969304|ref|YP_733097.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113883988|gb|ABI38040.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 451
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
+L K+Q C GG + + Q A L A P +VVATPGR L + + + L SI+Y+V D
Sbjct: 126 KLSSSLKIQLLC--GGIAQEEQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYLVLD 183
Query: 84 EADRLFEMGF--DVEQ 97
EADRL EMGF DV++
Sbjct: 184 EADRLLEMGFWPDVQK 199
>gi|365538809|ref|ZP_09363984.1| hypothetical protein VordA3_03733 [Vibrio ordalii ATCC 33509]
Length = 428
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + +K+ K+TKL + GG+ M +Q +L DI+VATPGR + E +
Sbjct: 86 LVAQIAQNIKDYVKYTKLSVAAVYGGNKMSSQIRQLEMGVDILVATPGRLEEHLSEGNVS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L++++++VFDEADR+ +MGF
Sbjct: 146 LANLEFLVFDEADRILDMGF 165
>gi|427788695|gb|JAA59799.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 870
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K GK + + C GG S Q L +IVVATPGR + ++
Sbjct: 354 LAQQIYLEAKRFGKVYGVAAACCFGGGSKWEQSKALQEGAEIVVATPGRMIDMIKMKATN 413
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + ++V DEADR+F+MGF+ + +S CD
Sbjct: 414 LERVTFLVLDEADRMFDMGFEPQVRSICD 442
>gi|17232210|ref|NP_488758.1| ATP-dependent RNA helicase [Nostoc sp. PCC 7120]
gi|17133855|dbj|BAB76417.1| ATP-dependent RNA helicase [Nostoc sp. PCC 7120]
Length = 426
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V++ GK+ KL S + GG S++ Q RL DI+VATPGR L V + + LS I+ +V
Sbjct: 97 VRDYGKYLKLNSMVMFGGVSINPQKQRLKGRVDILVATPGRLLDHVQQGTVNLSQIEILV 156
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 157 LDEADRMLDMGF 168
>gi|346642808|ref|YP_258676.2| DEAD/DEAH box helicase [Pseudomonas protegens Pf-5]
gi|341579950|gb|AAY90832.2| DEAD/DEAH box helicase domain protein [Pseudomonas protegens Pf-5]
Length = 446
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R L + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMLEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|114046504|ref|YP_737054.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113887946|gb|ABI41997.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 451
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 29 TKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRL 88
+ L L GG + ++Q A L A P +VVATPGR L + + + L SI+Y+V DEADRL
Sbjct: 129 SSLNIQLLCGGIAQEDQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYLVLDEADRL 188
Query: 89 FEMGF--DVEQ 97
EMGF DV++
Sbjct: 189 LEMGFWPDVQK 199
>gi|317052319|ref|YP_004113435.1| DEAD/DEAH box helicase domain-containing protein
[Desulfurispirillum indicum S5]
gi|316947403|gb|ADU66879.1| DEAD/DEAH box helicase domain protein [Desulfurispirillum indicum
S5]
Length = 457
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G ++ LI P + Q + V+ GK L+S + GG +M Q A L DIVVA
Sbjct: 70 GRRHVRALILTPTRELAAQVEESVRTYGKHLSLKSAVIFGGVAMGPQLANLRRGVDIVVA 129
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + + LS ++++V DEADR+ +MGF
Sbjct: 130 TPGRLLDHVQQKSIDLSKVEFLVLDEADRMLDMGF 164
>gi|157960747|ref|YP_001500781.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157845747|gb|ABV86246.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 432
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G +N LI P + Q + + K+ L+ + GG MD+Q +L DI++A
Sbjct: 71 GRSNARALILTPTRELAAQIADNINDYAKYLDLKVVTVYGGVKMDSQATKLKRGADIIIA 130
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
TPGR L ++ L LS++ ++V DEADR+ +MGF + Q
Sbjct: 131 TPGRLLEHIIACNLSLSNVDFLVLDEADRMLDMGFSADIQ 170
>gi|414076887|ref|YP_006996205.1| ATP-dependent helicase [Anabaena sp. 90]
gi|413970303|gb|AFW94392.1| ATP-dependent helicase [Anabaena sp. 90]
Length = 446
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
GF+ I LI P + Q + V++ GK+ L S + GG S+ Q +L DI+V+
Sbjct: 75 GFSPIRALILTPTRELAAQVQESVRDYGKYLNLNSMVMFGGVSIGPQKQKLRTRVDILVS 134
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + L LS ++ +V DEADR+ +MGF
Sbjct: 135 TPGRLLDHVQQGTLNLSRVEVLVLDEADRMLDMGF 169
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q + ++ LG++T +Q ++GG SM+ Q A L P+IVVATPGR + H+
Sbjct: 297 QCAQMIQRLGEYTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLIDHVRNTHSFGFE 356
Query: 76 SIQYVVFDEADRLFEMGF 93
+ VV DEADRL EMGF
Sbjct: 357 DVAAVVLDEADRLLEMGF 374
>gi|388546779|ref|ZP_10150051.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
gi|388275103|gb|EIK94693.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
Length = 445
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQT K V+ +FT ++S + GG+ Q A L PDI++ TPGR L + L
Sbjct: 83 LAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEHLNAGNLD 142
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 143 LSKVEVLVLDEADRMLDMGF 162
>gi|345871001|ref|ZP_08822950.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
gi|343921155|gb|EGV31879.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
Length = 451
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q +G +T+L++ + GGDS +Q + L +P+I+VATPGR L + E
Sbjct: 91 LARQIHTHFMRIGSYTRLRAEVITGGDSKGHQISDLRKNPEILVATPGRLLEFLETGEAD 150
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ ++ DEADR+ +MGF
Sbjct: 151 LSDLEILILDEADRMLDMGF 170
>gi|330446057|ref|ZP_08309709.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490248|dbj|GAA04206.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 426
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ F + K+T L+ GG SM+ Q ++A DI+VATPGR L V +
Sbjct: 98 LAQQVFDSMSAYAKYTDLKVAVAYGGTSMNVQVKAINAGADILVATPGRLLDHVFNRSVS 157
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
L+ I+ V DEADR+ +MGF V+ Q
Sbjct: 158 LTEIETFVLDEADRMLDMGFIVDIQ 182
>gi|390950354|ref|YP_006414113.1| DNA/RNA helicase [Thiocystis violascens DSM 198]
gi|390426923|gb|AFL73988.1| DNA/RNA helicase, superfamily II [Thiocystis violascens DSM 198]
Length = 453
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + +Q + LG FT+L + + GG+S +Q A L +P+I+VATPGR L
Sbjct: 78 LILLPTRELARQIYIHFMRLGSFTRLTAGVITGGESKAHQIATLRKNPEILVATPGRMLE 137
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
++ + L ++ +V DEADR+ +MGF
Sbjct: 138 LLQSGQADLRDLEILVLDEADRMLDMGF 165
>gi|333030556|ref|ZP_08458617.1| DEAD/DEAH box helicase domain protein [Bacteroides coprosuis DSM
18011]
gi|332741153|gb|EGJ71635.1| DEAD/DEAH box helicase domain protein [Bacteroides coprosuis DSM
18011]
Length = 378
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
+K+ ++T LQ T + GG +Q RL A DI+VATPGR L ++ + +K++ +Q+ V
Sbjct: 100 LKDYTRYTDLQYTVIFGGVKQGSQVNRLKAGVDILVATPGRLLDLMHQGHIKINKVQHFV 159
Query: 82 FDEADRLFEMGF--DVEQQSP 100
DEADR+ +MGF D+++ P
Sbjct: 160 LDEADRMLDMGFIHDIKRLLP 180
>gi|152988314|ref|YP_001347045.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
gi|150963472|gb|ABR85497.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
Length = 441
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+IV+ TPGR L
Sbjct: 75 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIVIGTPGRLLE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 135 QRNAGNLPLQDIEVLVLDEADRMLDMGF 162
>gi|152992886|ref|YP_001358607.1| ATP-dependent RNA helicase [Sulfurovum sp. NBC37-1]
gi|151424747|dbj|BAF72250.1| ATP-dependent RNA helicase [Sulfurovum sp. NBC37-1]
Length = 457
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 1 MGFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVV 57
MG I L+ P + Q + +K GK+ K ST + GG ++ Q A + DIV+
Sbjct: 70 MGKKQIRVLVLTPTRELAAQVAESIKTYGKYMKYTSTVVYGGVGINPQLATIRRGVDIVI 129
Query: 58 ATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
ATPGR L I + + S+++ +V DEADR+ +MGF
Sbjct: 130 ATPGRLLDIAGQQGIDFSALETLVLDEADRMLDMGF 165
>gi|345863156|ref|ZP_08815368.1| ATP-dependent RNA helicase RhlE [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345125617|gb|EGW55485.1| ATP-dependent RNA helicase RhlE [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 485
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V++ GK+ L+ST + GG ++ Q +L DI+VATPGR L V + L
Sbjct: 86 LAAQVGESVEQYGKYLPLKSTVIFGGVKINPQIEKLRHGVDILVATPGRLLDHVSQKTLD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 146 LSHIEILVLDEADRMLDMGF 165
>gi|345876776|ref|ZP_08828539.1| hypothetical protein Rifp1Sym_ag00100 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226165|gb|EGV52505.1| hypothetical protein Rifp1Sym_ag00100 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 547
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V++ GK+ L+ST + GG ++ Q +L DI+VATPGR L V + L
Sbjct: 148 LAAQVGESVEQYGKYLPLKSTVIFGGVKINPQIEKLRHGVDILVATPGRLLDHVSQKTLD 207
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 208 LSHIEILVLDEADRMLDMGF 227
>gi|257455420|ref|ZP_05620655.1| ATP-dependent RNA helicase RhlB [Enhydrobacter aerosaccus SK60]
gi|257447382|gb|EEV22390.1| ATP-dependent RNA helicase RhlB [Enhydrobacter aerosaccus SK60]
Length = 391
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHAS-PDIVVATPGRFLHIVVEMEL 72
+ QQ ++ EL KFT+L + CLLGG + Q +LH DI++ATPGR + + +
Sbjct: 94 LAQQIYQDCLELTKFTELHTVCLLGGTDYETQSKQLHQKFVDIIIATPGRLIDFCFQHHV 153
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ +V DEADR+ +MGF
Sbjct: 154 YLDRLEILVLDEADRMLDMGF 174
>gi|167950812|ref|ZP_02537886.1| DEAD/DEAH box helicase domain protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 415
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V++ GK+ L+ST + GG ++ Q +L DI+VATPGR L V + L
Sbjct: 86 LAAQVGESVEQYGKYLPLKSTVIFGGVKINPQIEKLRHGVDILVATPGRLLDHVSQKTLD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 146 LSHIEILVLDEADRMLDMGF 165
>gi|336124377|ref|YP_004566425.1| hypothetical protein VAA_02007 [Vibrio anguillarum 775]
gi|335342100|gb|AEH33383.1| hypothetical protein VAA_02007 [Vibrio anguillarum 775]
Length = 421
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + +K+ K+TKL + GG+ M +Q +L DI+VATPGR + E +
Sbjct: 79 LVAQIAQNIKDYVKYTKLSVAAVYGGNKMSSQVRQLEMGVDILVATPGRLEEHLSEGNVS 138
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L++++++VFDEADR+ +MGF
Sbjct: 139 LANLEFLVFDEADRILDMGF 158
>gi|398855606|ref|ZP_10612087.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
gi|398230573|gb|EJN16591.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
Length = 446
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVD 171
>gi|423096700|ref|ZP_17084496.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
gi|397887096|gb|EJL03579.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
Length = 448
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVD 171
>gi|407939705|ref|YP_006855346.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
gi|407897499|gb|AFU46708.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
KKS102]
Length = 594
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVREYGKYLDINSTVVFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ +V DEADR+ +MGF
Sbjct: 149 LSTVEVLVLDEADRMLDMGF 168
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++ K+ GK +Q C GG S Q L + +IVVATPGR + +V
Sbjct: 339 LSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATN 398
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + ++V DEADR+F+MGF+ + +S C+
Sbjct: 399 LIRVTFLVLDEADRMFDMGFEPQVRSICN 427
>gi|347821466|ref|ZP_08874900.1| DEAD/DEAH box helicase domain-containing protein, partial
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 464
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + +
Sbjct: 89 LAAQVEESVREYGKYLDIDSTVVFGGVGMNPQIERMKRGVDILVATPGRLLDLQQQGFVD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++Q +V DEADR+ +MGF
Sbjct: 149 LSAVQVLVLDEADRMLDMGF 168
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q VK +FT L+ST + GG M Q A L A +IV+ATPGR L V + +
Sbjct: 104 LADQVADNVKAYSRFTPLRSTVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHVQQKTVN 163
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS Q +V DEADR+ +MGF
Sbjct: 164 LSQTQILVMDEADRMLDMGF 183
>gi|358338001|dbj|GAA35819.2| probable ATP-dependent RNA helicase DDX17 [Clonorchis sinensis]
Length = 1557
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K V+E ++ +S L GG S Q +L SP++V+ATPGR L + +
Sbjct: 181 LAQQVEKVVEEFCSYSGFRSASLYGGTSRGGQMDQLARSPEVVIATPGRLLDFLQSKDTN 240
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L Y+V DEADR+ +MGF+
Sbjct: 241 LRRCTYLVLDEADRMLDMGFE 261
>gi|406911902|gb|EKD51608.1| hypothetical protein ACD_62C00220G0002 [uncultured bacterium]
Length = 421
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G +I LI P + Q K V+ GK L+ST + GG +M+ Q RL DIVVA
Sbjct: 72 GKRHIRALILTPTRELAAQVCKSVETYGKHLPLRSTVVFGGVNMEAQVRRLQYGVDIVVA 131
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + + LS + ++ DEADR+ +MGF
Sbjct: 132 TPGRLLDHIGQRTIDLSRVDVLILDEADRMLDMGF 166
>gi|217968880|ref|YP_002354114.1| DEAD/DEAH box helicase [Thauera sp. MZ1T]
gi|217506207|gb|ACK53218.1| DEAD/DEAH box helicase domain protein [Thauera sp. MZ1T]
Length = 441
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ K V+ GK + L + CL+GG M Q +L D+VVATPGR L + ++
Sbjct: 85 LAQQVEKAVQTYGKALRWLNTACLVGGAPMFAQIKQLQRQCDVVVATPGRLLDHLTRRKI 144
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
KLS ++ ++ DEADR+ +MGF
Sbjct: 145 KLSDVEVLILDEADRMLDMGF 165
>gi|430808618|ref|ZP_19435733.1| RNA helicase, partial [Cupriavidus sp. HMR-1]
gi|429498999|gb|EKZ97465.1| RNA helicase, partial [Cupriavidus sp. HMR-1]
Length = 423
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ L+ P + Q + V+ GK+ KL+S + GG ++ Q L DIVVATPG
Sbjct: 82 NVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGINPQIEALRRGVDIVVATPG 141
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L V + + LS ++ +V DEADR+ +MGF
Sbjct: 142 RLLDHVAQRTIDLSHVELLVLDEADRMLDMGF 173
>gi|94309401|ref|YP_582611.1| RNA helicase [Cupriavidus metallidurans CH34]
gi|93353253|gb|ABF07342.1| RNA helicase [Cupriavidus metallidurans CH34]
Length = 540
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ L+ P + Q + V+ GK+ KL+S + GG ++ Q L DIVVATPG
Sbjct: 82 NVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGINPQIEALRRGVDIVVATPG 141
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L V + + LS ++ +V DEADR+ +MGF
Sbjct: 142 RLLDHVAQRTIDLSHVELLVLDEADRMLDMGF 173
>gi|116051486|ref|YP_789681.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173308|ref|ZP_15631057.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
gi|115586707|gb|ABJ12722.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404535927|gb|EKA45584.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
Length = 446
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 80 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 140 QRNAGNLPLQDIEVLVLDEADRMLDMGF 167
>gi|398838810|ref|ZP_10596069.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
gi|398114480|gb|EJM04299.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|385208130|ref|ZP_10034998.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385180468|gb|EIF29744.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 520
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALRSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|187925284|ref|YP_001896926.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187716478|gb|ACD17702.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 515
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALRSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|170693410|ref|ZP_02884569.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170141565|gb|EDT09734.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 510
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALRSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|91785132|ref|YP_560338.1| ATP-dependent RNA helicase 1 [Burkholderia xenovorans LB400]
gi|91689086|gb|ABE32286.1| Putative ATP-dependent RNA helicase 1 [Burkholderia xenovorans
LB400]
Length = 543
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 111 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALRSGVDIVVATPGRLLDHMQQKTID 170
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 171 LSHLEILVLDEADRMLDMGF 190
>gi|323449287|gb|EGB05176.1| hypothetical protein AURANDRAFT_72308 [Aureococcus anophagefferens]
Length = 1379
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 17 QTFKFVKELGKFT------KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
QT++F ++ KF + L+GG++++ QF L P ++ATPGR H++ E
Sbjct: 620 QTYRFASKMSKFCLGMDGRQFSQAALVGGEAVEAQFDTLSRRPATLIATPGRLAHLLQEA 679
Query: 71 ELKLSSI---QYVVFDEADRLFEMGFDVE 96
L L ++ + VFDEADRLFEMGF ++
Sbjct: 680 PLSLITLARCRVAVFDEADRLFEMGFALQ 708
>gi|392308167|ref|ZP_10270701.1| ATP-dependent RNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 411
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++ ++T L+ C+ GG ++ Q L A D+V+ATPGR L +++ LK
Sbjct: 84 LAQQVAANSEDYAQYTGLKVACIYGGANISPQEKALKAGVDVVIATPGRLLDHLIKGTLK 143
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L ++ ++VFDEADR+ +MGF
Sbjct: 144 LENVSHLVFDEADRMLDMGF 163
>gi|297539139|ref|YP_003674908.1| DEAD/DEAH box helicase domain-containing protein [Methylotenera
versatilis 301]
gi|297258486|gb|ADI30331.1| DEAD/DEAH box helicase domain protein [Methylotenera versatilis
301]
Length = 532
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK GKF L ST + GG + + Q ARL DI+VATPGR L + +
Sbjct: 93 LAAQIEESVKVYGKFLPLTSTVIFGGVNANPQIARLKKPLDILVATPGRLLDHANQKNVD 152
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 153 LSGIEILVLDEADRMLDMGF 172
>gi|398878534|ref|ZP_10633653.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM67]
gi|398886701|ref|ZP_10641564.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM60]
gi|398188549|gb|EJM75850.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM60]
gi|398199789|gb|EJM86722.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM67]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|355640245|ref|ZP_09051664.1| hypothetical protein HMPREF1030_00750 [Pseudomonas sp. 2_1_26]
gi|354831457|gb|EHF15472.1| hypothetical protein HMPREF1030_00750 [Pseudomonas sp. 2_1_26]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 80 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 140 QRNAGNLPLQDIEVLVLDEADRMLDMGF 167
>gi|440295520|gb|ELP88433.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 672
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K EL T L+++ ++GG + QF L +PDI+VATPGR I+ + L
Sbjct: 96 QTVKVFNELTFKTNLRASLIIGGSKLYEQFENLEKNPDIIVATPGRLTFILESANISLQR 155
Query: 77 IQYVVFDEADRLFEMGF 93
+ V FDEAD +FE GF
Sbjct: 156 VDIVCFDEADMMFEQGF 172
>gi|15598662|ref|NP_252156.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|254236418|ref|ZP_04929741.1| hypothetical protein PACG_02400 [Pseudomonas aeruginosa C3719]
gi|421152705|ref|ZP_15612283.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
gi|421159022|ref|ZP_15618204.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
gi|421166364|ref|ZP_15624624.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 700888]
gi|421179366|ref|ZP_15636958.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
gi|9949609|gb|AAG06854.1|AE004767_5 probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|126168349|gb|EAZ53860.1| hypothetical protein PACG_02400 [Pseudomonas aeruginosa C3719]
gi|404525017|gb|EKA35305.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
gi|404538562|gb|EKA48091.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 700888]
gi|404547234|gb|EKA56246.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
gi|404548873|gb|EKA57812.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 80 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 140 QRNAGNLPLQDIEVLVLDEADRMLDMGF 167
>gi|378949418|ref|YP_005206906.1| protein SrmB [Pseudomonas fluorescens F113]
gi|359759432|gb|AEV61511.1| SrmB [Pseudomonas fluorescens F113]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|212555586|gb|ACJ28040.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 422
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + Q K V E G T L+S + GG S+D Q + L A DIVVATPG
Sbjct: 87 SIRALILVPTRELAVQVNKSVTEYGVNTALKSMVIYGGVSIDAQASSLAAGVDIVVATPG 146
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L + L L +I +VFDEADR+ +MGF
Sbjct: 147 RLLDHLRRGSLSLMAIDTLVFDEADRMLDMGF 178
>gi|157962845|ref|YP_001502879.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157847845|gb|ABV88344.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 414
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 29 TKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRL 88
T + S + GG S+D Q +L A DI+VATPGR L + L LSSI Y+VFDEADR+
Sbjct: 105 TDIASVVIYGGVSIDAQATKLAAGCDIIVATPGRLLDHLRRGSLNLSSIDYLVFDEADRM 164
Query: 89 FEMGF 93
+MGF
Sbjct: 165 LDMGF 169
>gi|77457664|ref|YP_347169.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens Pf0-1]
gi|77381667|gb|ABA73180.1| ATP-dependent RNA helicase [Pseudomonas fluorescens Pf0-1]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398978205|ref|ZP_10687628.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
gi|398137316|gb|EJM26378.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|218890286|ref|YP_002439150.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
gi|218770509|emb|CAW26274.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 80 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 140 QRNAGNLPLQDIEVLVLDEADRMLDMGF 167
>gi|107102999|ref|ZP_01366917.1| hypothetical protein PaerPA_01004068 [Pseudomonas aeruginosa PACS2]
gi|296388016|ref|ZP_06877491.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAb1]
gi|386057566|ref|YP_005974088.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
gi|392982794|ref|YP_006481381.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|416860217|ref|ZP_11914182.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|416881853|ref|ZP_11921712.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
gi|418586208|ref|ZP_13150253.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa MPAO1/P1]
gi|418591980|ref|ZP_13155860.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa MPAO1/P2]
gi|419754926|ref|ZP_14281284.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|421518007|ref|ZP_15964681.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|451988210|ref|ZP_21936348.1| ATP-dependent RNA helicase SrmB [Pseudomonas aeruginosa 18A]
gi|334835539|gb|EGM14407.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
gi|334837698|gb|EGM16449.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|347303872|gb|AEO73986.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
gi|375043428|gb|EHS36052.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049181|gb|EHS41688.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa MPAO1/P2]
gi|384398744|gb|EIE45149.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318299|gb|AFM63679.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|404347489|gb|EJZ73838.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|451754117|emb|CCQ88871.1| ATP-dependent RNA helicase SrmB [Pseudomonas aeruginosa 18A]
gi|453047505|gb|EME95219.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PA21_ST175]
Length = 441
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 75 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 135 QRNAGNLPLQDIEVLVLDEADRMLDMGF 162
>gi|407714673|ref|YP_006835238.1| ATP-dependent RNA helicase RhlE [Burkholderia phenoliruptrix
BR3459a]
gi|407236857|gb|AFT87056.1| ATP-dependent RNA helicase RhlE [Burkholderia phenoliruptrix
BR3459a]
Length = 530
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALKSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|424921971|ref|ZP_18345332.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
gi|404303131|gb|EJZ57093.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398866146|ref|ZP_10621647.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
gi|398241657|gb|EJN27303.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398870252|ref|ZP_10625599.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
gi|398209137|gb|EJM95820.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398891184|ref|ZP_10644598.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
gi|398187211|gb|EJM74560.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398914196|ref|ZP_10656834.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|398951208|ref|ZP_10673906.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|426410872|ref|YP_007030971.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
gi|398156990|gb|EJM45400.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|398178936|gb|EJM66566.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|426269089|gb|AFY21166.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398963567|ref|ZP_10679679.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
gi|398149569|gb|EJM38213.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|398985369|ref|ZP_10691023.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
gi|399014054|ref|ZP_10716350.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398111891|gb|EJM01765.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398154210|gb|EJM42690.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|416242434|ref|ZP_11633470.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BC7]
gi|326571018|gb|EGE21042.1| ATP-dependent RNA helicase RhlB [Moraxella catarrhalis BC7]
Length = 391
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMEL 72
+ QQ EL +F++L + C+ GG D Q +LH P DI++ TPGR + V + EL
Sbjct: 96 LAQQILADCHELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGEL 155
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ V DEADR+ +MGF
Sbjct: 156 FLDRVEVFVLDEADRMLDMGF 176
>gi|307730917|ref|YP_003908141.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307585452|gb|ADN58850.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 517
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALKSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|323527279|ref|YP_004229432.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323384281|gb|ADX56372.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1001]
Length = 530
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L + DIVVATPGR L + + +
Sbjct: 89 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIGALKSGVDIVVATPGRLLDHMQQKTID 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSHLEILVLDEADRMLDMGF 168
>gi|398999282|ref|ZP_10702030.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM18]
gi|398132217|gb|EJM21499.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM18]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|330808146|ref|YP_004352608.1| ATP-dependent RNA helicase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423695930|ref|ZP_17670420.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
gi|327376254|gb|AEA67604.1| putative ATP-dependent RNA helicase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|388009311|gb|EIK70562.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|241766307|ref|ZP_04764197.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241363561|gb|EER58995.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E GK+ + ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 89 LAAQVEESVREYGKYLDINSTVVFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ +V DEADR+ +MGF
Sbjct: 149 LSTVEVLVLDEADRMLDMGF 168
>gi|294658221|ref|XP_002770738.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
gi|218511822|sp|Q6BML1.2|PRP5_DEBHA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|202952969|emb|CAR66268.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
Length = 913
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 9 LISFPIVQQTFKFVKELGKFTK---LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + + KEL FTK + S C GG S+++Q A L I+V TPGR +
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIID 453
Query: 66 IVVEMELKLSSIQ---YVVFDEADRLFEMGFD 94
++ +++++Q Y+V DEADR+F+MGF+
Sbjct: 454 LLAANSGRVTNLQRVTYLVLDEADRMFDMGFE 485
>gi|89074254|ref|ZP_01160744.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
gi|89049958|gb|EAR55492.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
Length = 427
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ F + K+T+++ GG SM+ Q L+A +I+VATPGR L V +
Sbjct: 98 LAQQVFDSITTYAKYTEIKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVS 157
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS ++ V DEADR+ +MGF V+ Q
Sbjct: 158 LSEVETFVLDEADRMLDMGFIVDIQ 182
>gi|89072912|ref|ZP_01159469.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
gi|89051434|gb|EAR56889.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
Length = 432
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ LI P + +Q + E K+T + T + GG M +Q RL DI+VATPG
Sbjct: 74 NVRALILAPTRELAEQIANNINEYAKYTDVNCTAIFGGKKMSSQEKRLEQGVDILVATPG 133
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R + + + L++++++VFDEADR+ +MGF
Sbjct: 134 RLIEHMELNNVSLANLEFLVFDEADRMLDMGF 165
>gi|226944026|ref|YP_002799099.1| ATP-dependent DEAD/DEAH box helicase [Azotobacter vinelandii DJ]
gi|226718953|gb|ACO78124.1| ATP-dependent DEAD/DEAH box helicase [Azotobacter vinelandii DJ]
Length = 439
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG++ Q A L PDI++ TPG
Sbjct: 71 SIRALILLPTRELAQQTLKEVERFSQFTFIKSGLVTGGENFKVQAALLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RLLEHLNAGHLDLRDVEVLVLDEADRMLDMGFAEDVQR 168
>gi|398925961|ref|ZP_10662200.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
gi|398171555|gb|EJM59457.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVD 171
>gi|212558407|gb|ACJ30861.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 432
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
+N LI P + Q + + K+ ++ ++GG MD+Q +L DI++ATP
Sbjct: 73 SNARALILTPTRELAAQIADNINDYAKYLEVNVVTIVGGVKMDSQATKLKRGADIIIATP 132
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
GR L +V L LS++ ++V DEADR+ +MGF + Q
Sbjct: 133 GRLLEHIVACNLSLSNVDFLVLDEADRMLDMGFSADIQ 170
>gi|242019547|ref|XP_002430222.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515318|gb|EEB17484.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 763
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K+ GK +Q C GG S Q L +IVVATPGR + ++
Sbjct: 354 LSQQIYSEAKKFGKVYNIQVICCYGGGSKWEQSKALENGAEIVVATPGRMIDLIKMKATN 413
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + ++V DEADR+F+MGF+ + +S C+
Sbjct: 414 LKRVTFLVLDEADRMFDMGFEPQVRSICN 442
>gi|256829787|ref|YP_003158515.1| DEAD/DEAH box helicase [Desulfomicrobium baculatum DSM 4028]
gi|256578963|gb|ACU90099.1| DEAD/DEAH box helicase domain protein [Desulfomicrobium baculatum
DSM 4028]
Length = 545
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +K + L+ T GG ++ Q ARL DI+VATPGR L + + L L+S
Sbjct: 87 QVGESIKAYARKVSLRCTVAFGGVRIEPQIARLERGIDILVATPGRLLDLASQEHLSLAS 146
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
I+++VFDEADR+ ++GF E + D
Sbjct: 147 IEFLVFDEADRMLDLGFSGEINAILD 172
>gi|254242152|ref|ZP_04935474.1| hypothetical protein PA2G_02881 [Pseudomonas aeruginosa 2192]
gi|126195530|gb|EAZ59593.1| hypothetical protein PA2G_02881 [Pseudomonas aeruginosa 2192]
Length = 446
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 80 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 140 QRNAGNLPLQDIEVLVLDEADRMLDMGF 167
>gi|313108824|ref|ZP_07794809.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|386067509|ref|YP_005982813.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310881311|gb|EFQ39905.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|348036068|dbj|BAK91428.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 441
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 75 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 135 QRNAGNLPLQDIEVLVLDEADRMLDMGF 162
>gi|445495878|ref|ZP_21462922.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444792039|gb|ELX13586.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 463
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+TKL ST + GG ++ Q +L DI+VATPGR L + + +
Sbjct: 92 LAAQVEESVRTYGKYTKLNSTVIFGGVGINPQIKQLKHGVDILVATPGRLLDHMEQRTVN 151
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ ++ DEADR+ +MGF
Sbjct: 152 LSKVEILILDEADRMLDMGF 171
>gi|288942044|ref|YP_003444284.1| DEAD/DEAH box helicase domain-containing protein [Allochromatium
vinosum DSM 180]
gi|288897416|gb|ADC63252.1| DEAD/DEAH box helicase domain protein [Allochromatium vinosum DSM
180]
Length = 454
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 25 LGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDE 84
LG +T+L S + GG+S +Q A L +P+I+VATPGR L + + L ++++V DE
Sbjct: 97 LGSYTRLTSGVITGGESKAHQIATLRKNPEILVATPGRLLEFLETGQANLRDLEFLVLDE 156
Query: 85 ADRLFEMGF 93
ADR+ +MGF
Sbjct: 157 ADRMLDMGF 165
>gi|145481669|ref|XP_001426857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393934|emb|CAK59459.1| unnamed protein product [Paramecium tetraurelia]
Length = 542
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE-MELKLS 75
Q F+ ++L +F+ + ++G + Q A L PDI++ATPGR + I+ + LS
Sbjct: 176 QCFEMFQKLNQFSHCTAALVIGAVPIQQQEAELRRYPDIIIATPGRIVDIMKNSFSIDLS 235
Query: 76 SIQYVVFDEADRLFEMGFDVE-----QQSPCD 102
SI+ +V DEADRL EMGF+ E QQ+P D
Sbjct: 236 SIEVLVLDEADRLMEMGFEAEIKEILQQTPRD 267
>gi|424942845|ref|ZP_18358608.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa
NCMG1179]
gi|346059291|dbj|GAA19174.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa
NCMG1179]
Length = 441
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L
Sbjct: 75 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L I+ +V DEADR+ +MGF
Sbjct: 135 QRNAGNLPLQDIEVLVLDEADRMLDMGF 162
>gi|398804512|ref|ZP_10563506.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398093685|gb|EJL84061.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 575
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G + LI P + Q + V+ GK+T L S + GG M Q +L DI+VA
Sbjct: 74 GVNAVRALIMTPTRELAAQVEESVRTYGKYTDLTSMVMFGGVGMGAQIEKLRRGVDILVA 133
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + L LS +Q +V DEADR+ +MGF
Sbjct: 134 TPGRLLDHASQGTLDLSQVQILVLDEADRMLDMGF 168
>gi|312898631|ref|ZP_07758021.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
gi|310620550|gb|EFQ04120.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
Length = 522
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + + L ++T +Q+ + GG M+ Q RL SP I+VATPGR + + +KLSS
Sbjct: 92 QVAEEINHLAQYTPVQALPIYGGQDMERQLRRLRKSPQIIVATPGRLIDHMKRGTVKLSS 151
Query: 77 IQYVVFDEADRLFEMGF 93
I +V DEAD + MGF
Sbjct: 152 ISTIVLDEADEMLNMGF 168
>gi|407801566|ref|ZP_11148410.1| DEAD/DEAH box helicase [Alcanivorax sp. W11-5]
gi|407025003|gb|EKE36746.1| DEAD/DEAH box helicase [Alcanivorax sp. W11-5]
Length = 443
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A LI P + +QT K V++L FT +++ + GG+ Q AR+ +PDI++ TP
Sbjct: 70 AGTRALILLPTRELARQTLKHVEQLIGFTYIKAELITGGEDFKVQAARMRKNPDILIGTP 129
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GR L + L S + +V DEADR+ +MGF
Sbjct: 130 GRLLEHLEAGNLDFSDLTMLVLDEADRMLDMGF 162
>gi|159474578|ref|XP_001695402.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275885|gb|EDP01660.1| predicted protein [Chlamydomonas reinhardtii]
Length = 390
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+S CL GG S + Q A L P +V+ATPGR L V ++L + Y+V DEADR+ +
Sbjct: 108 LRSVCLYGGASREEQLAALRTRPHLVIATPGRLLDFVEAGMIRLGQVSYLVLDEADRMLD 167
Query: 91 MGFD 94
MGF+
Sbjct: 168 MGFE 171
>gi|431908881|gb|ELK12473.1| ATP-dependent RNA helicase DDX42 [Pteropus alecto]
Length = 927
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 329 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 388
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 389 LQRVSYLVFDEADRMFDMGFEYQVRS 414
>gi|426347141|ref|XP_004041217.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Gorilla
gorilla gorilla]
gi|426347143|ref|XP_004041218.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Gorilla
gorilla gorilla]
Length = 938
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|426238255|ref|XP_004013070.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Ovis aries]
Length = 948
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|157817897|ref|NP_001100529.1| ATP-dependent RNA helicase DDX42 [Rattus norvegicus]
gi|149054552|gb|EDM06369.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) [Rattus
norvegicus]
Length = 929
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|3435312|gb|AAC32396.1| RNA helicase-related protein [Homo sapiens]
Length = 709
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 219 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 278
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 279 LQRVSYLVFDEADRMFDMGFEYQVRS 304
>gi|74152734|dbj|BAE42635.1| unnamed protein product [Mus musculus]
Length = 929
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|26340024|dbj|BAC33675.1| unnamed protein product [Mus musculus]
Length = 810
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 219 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 278
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 279 LQRVSYLVFDEADRMFDMGFEYQVRS 304
>gi|417405318|gb|JAA49373.1| Putative rna helicase [Desmodus rotundus]
Length = 933
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|410981498|ref|XP_003997105.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Felis catus]
Length = 934
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|403303756|ref|XP_003942489.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303758|ref|XP_003942490.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 933
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|402900734|ref|XP_003913323.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Papio
anubis]
gi|402900736|ref|XP_003913324.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Papio
anubis]
Length = 937
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|395826079|ref|XP_003786247.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Otolemur garnettii]
Length = 936
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|395532890|ref|XP_003768499.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Sarcophilus harrisii]
Length = 943
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|358417495|ref|XP_003583658.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
gi|359077050|ref|XP_003587506.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
Length = 947
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|351704433|gb|EHB07352.1| ATP-dependent RNA helicase DDX42 [Heterocephalus glaber]
Length = 935
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 339 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 398
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 399 LQRVSYLVFDEADRMFDMGFEYQVRS 424
>gi|350590222|ref|XP_003131337.3| PREDICTED: ATP-dependent RNA helicase DDX42 [Sus scrofa]
Length = 906
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 303 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 362
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 363 LQRVSYLVFDEADRMFDMGFEYQVRS 388
>gi|345804940|ref|XP_537598.3| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
isoform 1 [Canis lupus familiaris]
Length = 934
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|345319068|ref|XP_003430097.1| PREDICTED: ATP-dependent RNA helicase DDX42, partial
[Ornithorhynchus anatinus]
Length = 717
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 306 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 365
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 366 LQRVSYLVFDEADRMFDMGFEYQVRS 391
>gi|344285247|ref|XP_003414374.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Loxodonta africana]
Length = 934
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|354479437|ref|XP_003501916.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
gi|344243071|gb|EGV99174.1| ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
Length = 928
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 337 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 396
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 397 LQRVSYLVFDEADRMFDMGFEYQVRS 422
>gi|334322878|ref|XP_003340311.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Monodelphis
domestica]
Length = 730
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|332243110|ref|XP_003270725.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Nomascus leucogenys]
Length = 938
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|301778305|ref|XP_002924562.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Ailuropoda
melanoleuca]
Length = 935
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|296201782|ref|XP_002748184.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Callithrix jacchus]
Length = 934
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|291406357|ref|XP_002719521.1| PREDICTED: DEAD box polypeptide 42 protein [Oryctolagus cuniculus]
Length = 935
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|281351661|gb|EFB27245.1| hypothetical protein PANDA_013938 [Ailuropoda melanoleuca]
Length = 940
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 343 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 402
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 403 LQRVSYLVFDEADRMFDMGFEYQVRS 428
>gi|194216767|ref|XP_001501051.2| PREDICTED: ATP-dependent RNA helicase DDX42 [Equus caballus]
Length = 935
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|193785182|dbj|BAG54335.1| unnamed protein product [Homo sapiens]
Length = 674
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 74 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 133
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 134 LQRVSYLVFDEADRMFDMGFEYQVRS 159
>gi|193788232|dbj|BAG53126.1| unnamed protein product [Homo sapiens]
Length = 625
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 74 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 133
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 134 LQRVSYLVFDEADRMFDMGFEYQVRS 159
>gi|148702332|gb|EDL34279.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Mus
musculus]
Length = 927
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 336 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 395
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 396 LQRVSYLVFDEADRMFDMGFEYQVRS 421
>gi|148702333|gb|EDL34280.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Mus
musculus]
Length = 1012
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 421 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 480
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 481 LQRVSYLVFDEADRMFDMGFEYQVRS 506
>gi|133777033|gb|AAH43036.4| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus]
Length = 810
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 219 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 278
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 279 LQRVSYLVFDEADRMFDMGFEYQVRS 304
>gi|119614682|gb|EAW94276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Homo
sapiens]
Length = 828
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 228 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 287
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 288 LQRVSYLVFDEADRMFDMGFEYQVRS 313
>gi|119614684|gb|EAW94278.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_c [Homo
sapiens]
Length = 936
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 336 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 395
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 396 LQRVSYLVFDEADRMFDMGFEYQVRS 421
>gi|114669830|ref|XP_001147818.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 7 [Pan
troglodytes]
gi|114669832|ref|XP_001147880.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 8 [Pan
troglodytes]
gi|397480220|ref|XP_003811385.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Pan
paniscus]
gi|397480222|ref|XP_003811386.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Pan
paniscus]
gi|410223570|gb|JAA09004.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410223572|gb|JAA09005.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410254498|gb|JAA15216.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294570|gb|JAA25885.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294572|gb|JAA25886.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338913|gb|JAA38403.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338915|gb|JAA38404.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
Length = 938
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|387763217|ref|NP_001248484.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|355568823|gb|EHH25104.1| hypothetical protein EGK_08866 [Macaca mulatta]
gi|355754284|gb|EHH58249.1| hypothetical protein EGM_08053 [Macaca fascicularis]
gi|380809324|gb|AFE76537.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|383415577|gb|AFH31002.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|384945118|gb|AFI36164.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
Length = 937
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|51258614|gb|AAH78667.1| DDX42 protein, partial [Homo sapiens]
Length = 919
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 319 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 378
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 379 LQRVSYLVFDEADRMFDMGFEYQVRS 404
>gi|15930131|gb|AAH15505.1| DDX42 protein [Homo sapiens]
gi|23336904|tpg|DAA00077.1| TPA_exp: SF3b125 DEAD-box protein [Homo sapiens]
gi|158259277|dbj|BAF85597.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 219 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 278
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 279 LQRVSYLVFDEADRMFDMGFEYQVRS 304
>gi|157838001|ref|NP_082350.3| ATP-dependent RNA helicase DDX42 [Mus musculus]
gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus]
Length = 929
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|45446743|ref|NP_031398.2| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|45446747|ref|NP_987095.1| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|74750541|sp|Q86XP3.1|DDX42_HUMAN RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42; AltName: Full=RNA helicase-like protein;
Short=RHELP; AltName: Full=RNA helicase-related protein;
Short=RNAHP; AltName: Full=SF3b DEAD box protein;
AltName: Full=Splicing factor 3B-associated 125 kDa
protein; Short=SF3b125
gi|29420431|dbj|BAC66466.1| RNA helicase-related protein [Homo sapiens]
gi|62205357|gb|AAH93081.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Homo sapiens]
gi|119614683|gb|EAW94277.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Homo
sapiens]
gi|168277556|dbj|BAG10756.1| ATP-dependent RNA helicase DDX42 [synthetic construct]
Length = 938
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|326934003|ref|XP_003213086.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Meleagris
gallopavo]
Length = 944
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVTYLVFDEADRMFDMGFEYQVRS 423
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 336 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 395
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 396 LQRVTYLVFDEADRMFDMGFEYQVRS 421
>gi|224086197|ref|XP_002193200.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Taeniopygia guttata]
Length = 923
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVTYLVFDEADRMFDMGFEYQVRS 423
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 291 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 350
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 351 LQRVTYLVFDEADRMFDMGFEYQVRS 376
>gi|71896321|ref|NP_001026097.1| ATP-dependent RNA helicase DDX42 [Gallus gallus]
gi|82194905|sp|Q5F485.1|DDX42_CHICK RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|60098437|emb|CAH65049.1| hypothetical protein RCJMB04_2e15 [Gallus gallus]
Length = 944
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVTYLVFDEADRMFDMGFEYQVRS 423
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 335 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 394
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 395 LQRVTYLVFDEADRMFDMGFEYQVRS 420
>gi|124002116|ref|ZP_01686970.1| ATP-dependent RNA helicase [Microscilla marina ATCC 23134]
gi|123992582|gb|EAY31927.1| ATP-dependent RNA helicase [Microscilla marina ATCC 23134]
Length = 571
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + ++ KF K+++T + GG S+D Q L IVV TPGR L ++ +LKL
Sbjct: 86 QIARDIQSFAKFMKIRTTAVYGGASIDKQIDALKRGVHIVVGTPGRSLDLIKRKKLKLEQ 145
Query: 77 IQYVVFDEADRLFEMGFDVE 96
IQ++V DEAD + MGF E
Sbjct: 146 IQWLVLDEADEMLNMGFKQE 165
>gi|408480568|ref|ZP_11186787.1| ATP-dependent RNA helicase [Pseudomonas sp. R81]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|388468344|ref|ZP_10142554.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
gi|388011924|gb|EIK73111.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|423692871|ref|ZP_17667391.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
gi|387997844|gb|EIK59173.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|387894976|ref|YP_006325273.1| DEAD/DEAH box helicase [Pseudomonas fluorescens A506]
gi|387163383|gb|AFJ58582.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
A506]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|393775871|ref|ZP_10364176.1| atp-dependent rna helicase [Ralstonia sp. PBA]
gi|392717127|gb|EIZ04696.1| atp-dependent rna helicase [Ralstonia sp. PBA]
Length = 507
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V + K T L+ST + GG M+ Q A L +I+VATPGR L V + +
Sbjct: 97 LADQVYDNVAKYAKHTALRSTVVFGGVDMNPQTAELRRGVEILVATPGRLLDHVQQKTVN 156
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 157 LSQVQMLVLDEADRMLDMGF 176
>gi|90577462|ref|ZP_01233273.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
gi|90440548|gb|EAS65728.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
Length = 432
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ LI P + +Q + E K+T + T + GG M Q RL DI+VATPG
Sbjct: 74 NVRALILAPTRELAEQIANNINEYAKYTDVNCTAIFGGKKMSTQEKRLEQGVDILVATPG 133
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R + + + L++++++VFDEADR+ +MGF
Sbjct: 134 RLIEHMELNNVSLANLEFLVFDEADRMLDMGF 165
>gi|337278789|ref|YP_004618260.1| ATP-dependent RNA helicase [Ramlibacter tataouinensis TTB310]
gi|334729865|gb|AEG92241.1| Candidate ATP-dependent RNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 606
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + ++ GK+ L ST + GG M+ Q R+ DI+VATPGR L + + L
Sbjct: 99 LAAQVEESIRTYGKYLPLTSTVIFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGHLD 158
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ +V DEADR+ +MGF
Sbjct: 159 LSTVEVLVLDEADRMLDMGF 178
>gi|398995582|ref|ZP_10698462.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
gi|398129619|gb|EJM18978.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQR 168
>gi|269104692|ref|ZP_06157388.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161332|gb|EEZ39829.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 430
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ LI P +V+Q +K+ ++T L + + GG + Q +L + DI+VATPG
Sbjct: 74 NVRALILAPTRELVEQIANNIKDYTRYTDLTTVAVFGGRKIATQEKKLESGCDILVATPG 133
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L + + LS+I+++VFDEADR+ +MGF
Sbjct: 134 RLLEHLELQNVLLSNIEFLVFDEADRMLDMGF 165
>gi|407365774|ref|ZP_11112306.1| DEAD/DEAH box helicase [Pseudomonas mandelii JR-1]
Length = 448
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQR 168
>gi|327403899|ref|YP_004344737.1| DEAD/DEAH box helicase domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327319407|gb|AEA43899.1| DEAD/DEAH box helicase domain protein [Fluviicola taffensis DSM
16823]
Length = 375
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVF 82
K GK +KL+S + GG + + Q +L+A DI+VATPGR L ++ + ++LS I + V
Sbjct: 95 KSYGKHSKLRSMVIFGGVNQNKQVNQLNAGIDILVATPGRLLDLMNQGHIQLSKITHFVL 154
Query: 83 DEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 DEADRMLDMGF 165
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVTYLVFDEADRMFDMGFEYQVRS 423
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 336 LCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 395
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 396 LQRVTYLVFDEADRMFDMGFEYQVRS 421
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 186 LCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 245
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 246 LQRVTYLVFDEADRMFDMGFEYQVRS 271
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 331 LCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 390
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 391 LQRVTYLVFDEADRMFDMGFEYQVRS 416
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 337 LCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 396
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 397 LQRVTYLVFDEADRMFDMGFEYQVRS 422
>gi|298490698|ref|YP_003720875.1| DEAD/DEAH box helicase ['Nostoc azollae' 0708]
gi|298232616|gb|ADI63752.1| DEAD/DEAH box helicase domain protein ['Nostoc azollae' 0708]
Length = 492
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G+ I LI P + Q + V + GK+ KL+S + GG S++ Q L + DIVV+
Sbjct: 75 GWVPIRALILTPTRELAAQVEESVHDYGKYLKLKSMAMFGGVSINPQKRLLKSGVDIVVS 134
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L V + + LS I+ +V DEADR+ +MGF
Sbjct: 135 TPGRLLDHVEQGTVNLSRIEVLVLDEADRMLDMGF 169
>gi|398857768|ref|ZP_10613465.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM79]
gi|398905928|ref|ZP_10653194.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
gi|398173884|gb|EJM61699.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
gi|398240326|gb|EJN26009.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM79]
Length = 448
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQR 168
>gi|398941979|ref|ZP_10670072.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM41(2012)]
gi|398161344|gb|EJM49580.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM41(2012)]
Length = 448
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQR 168
>gi|260773326|ref|ZP_05882242.1| ATP-dependent RNA helicase [Vibrio metschnikovii CIP 69.14]
gi|260612465|gb|EEX37668.1| ATP-dependent RNA helicase [Vibrio metschnikovii CIP 69.14]
Length = 428
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + +K+ K+T L T + GG+ M +Q +L + DI+VATPGR + E +
Sbjct: 86 LAAQIAQNIKDYVKYTSLSVTAVYGGNKMSSQVRQLESGVDILVATPGRLEEHLSEGNVS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L++++++VFDEADR+ +MGF
Sbjct: 146 LANLEFLVFDEADRILDMGF 165
>gi|440736789|ref|ZP_20916374.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
gi|440382721|gb|ELQ19213.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
Length = 448
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|193573502|ref|XP_001943796.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Acyrthosiphon
pisum]
Length = 737
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K+ GK L+ C GG S Q L +I+V TPGR + +V
Sbjct: 327 LSQQIYVEAKKFGKIYNLRVVCCYGGGSKWEQSKALEGGAEIIVGTPGRVIDLVKMSATN 386
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L+ + ++V DEADR+F MGF+ + +S CD
Sbjct: 387 LTRVTFLVLDEADRMFNMGFEPQVRSICD 415
>gi|451343566|ref|ZP_21912637.1| hypothetical protein HMPREF9943_00862 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337663|gb|EMD16820.1| hypothetical protein HMPREF9943_00862 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 519
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++ + +G FT L+ TC+ GG +++ Q + + DIV+ TPGR + ++ LKL
Sbjct: 83 QIYEELTRIGHFTGLRYTCVYGGSNIEKQIRTIKSGVDIVIGTPGRVMDLMRRKVLKLDG 142
Query: 77 IQYVVFDEADRLFEMGF--DVE 96
I Y V DEAD + MGF D+E
Sbjct: 143 IHYFVLDEADEMLNMGFIEDIE 164
>gi|85860692|ref|YP_462894.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
gi|85723783|gb|ABC78726.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
Length = 423
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + + E+ + TKL+S L GG S + Q +L +I+VA PGR L +V +
Sbjct: 82 LAEQINESINEMSRSTKLKSVALYGGVSKNPQIEKLRQGAEIIVACPGRLLDLVAQGVAD 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ V DEADR+F+MGF
Sbjct: 142 LSGIEVFVLDEADRMFDMGF 161
>gi|359779937|ref|ZP_09283164.1| putative ATP-dependent RNA helicase [Pseudomonas psychrotolerans
L19]
gi|359372553|gb|EHK73117.1| putative ATP-dependent RNA helicase [Pseudomonas psychrotolerans
L19]
Length = 437
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K ++ G+FT L++ ++GG+ Q A L +P+I+VATPGR L
Sbjct: 75 LILLPTRELAQQTAKEIERFGQFTFLKAGLVIGGEDFRVQAAGLRKNPEILVATPGRLLE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
+ L I+ +V DEADR+ +MGF DV Q
Sbjct: 135 QRNAGNVDLKDIEMLVLDEADRMLDMGFSEDVLQ 168
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +K L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 223 IRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVALRSRPDIVVATPGR 282
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ M + L + ++ DEADRL E+GF E Q
Sbjct: 283 MIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQ 319
>gi|283769405|ref|ZP_06342304.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
gi|283104062|gb|EFC05446.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
Length = 425
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + Q F+ +K G++ L++ C+ GG Q + + DI++ATPG
Sbjct: 70 SIRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQLKAIRSGCDILIATPG 129
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF-----DVEQQSPCD 102
R L + ++ L I+++V DEADR+ +MGF + QQ P D
Sbjct: 130 RLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIPND 175
>gi|447917697|ref|YP_007398265.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
gi|445201560|gb|AGE26769.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
Length = 448
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|404497891|ref|YP_006721997.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|418066972|ref|ZP_12704326.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
gi|78195491|gb|ABB33258.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|373559543|gb|EHP85836.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
Length = 452
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ V+ GKF +++S +LGG Q L A D++VATPGR + ++ L
Sbjct: 85 LAQQVTDAVRSYGKFLRIRSGAILGGMPYREQLRLLSAPVDLIVATPGRLVDLLDRRSLD 144
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ---QSPCD 102
LS ++ ++ DEADR+ +MGF DV++ SP D
Sbjct: 145 LSRLELLILDEADRMLDMGFSDDVDRVAAASPSD 178
>gi|73540223|ref|YP_294743.1| helicase [Ralstonia eutropha JMP134]
gi|72117636|gb|AAZ59899.1| Helicase, C-terminal:Type III restriction enzyme, res
subunit:DEAD/DEAH box helicase, N-terminal [Ralstonia
eutropha JMP134]
Length = 506
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+S + GG ++ Q +L +IVVATPGR L V + +
Sbjct: 87 LAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQLRRGVEIVVATPGRLLDHVSQRTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LSS++ +V DEADR+ +MGF
Sbjct: 147 LSSVELLVLDEADRMLDMGF 166
>gi|410093986|ref|ZP_11290448.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
gi|409758627|gb|EKN43906.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
Length = 445
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLVTGGEDFKAQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|395648526|ref|ZP_10436376.1| ATP-dependent RNA helicase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 448
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|407041638|gb|EKE40867.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 578
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ + T ++S C+ GG Q + DI+VATPGR L+ + + LS
Sbjct: 226 QQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLS 285
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
S++Y++FDEADR+ +MGF+ + + C+
Sbjct: 286 SVRYLIFDEADRMLDMGFEPQIREICE 312
>gi|67475258|ref|XP_653330.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470272|gb|EAL47944.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 578
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ + T ++S C+ GG Q + DI+VATPGR L+ + + LS
Sbjct: 226 QQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLS 285
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
S++Y++FDEADR+ +MGF+ + + C+
Sbjct: 286 SVRYLIFDEADRMLDMGFEPQIREICE 312
>gi|431796129|ref|YP_007223033.1| DNA/RNA helicase [Echinicola vietnamensis DSM 17526]
gi|430786894|gb|AGA77023.1| DNA/RNA helicase, superfamily II [Echinicola vietnamensis DSM
17526]
Length = 453
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + + LGK+T L+ CL GG Q ++ A DI++ATPGRF+ I + EL
Sbjct: 87 LVIQIEQAILTLGKYTDLRYACLYGGVGPTPQIEKIRAGVDIIIATPGRFMDIYSKGELF 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+ +I+ +V DEAD++ +MGF
Sbjct: 147 VRNIKTMVMDEADKMMDMGF 166
>gi|348665957|gb|EGZ05785.1| hypothetical protein PHYSODRAFT_533185 [Phytophthora sojae]
Length = 2125
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I +T KF K LG L++T + GG S+ Q A L DIV+ TPGR + I+ K
Sbjct: 1613 IYMETRKFSKGLG----LRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGK 1668
Query: 74 LSSIQ---YVVFDEADRLFEMGFD 94
+ S+Q YVV DEADR+F+MGF+
Sbjct: 1669 MVSLQRVTYVVLDEADRMFDMGFE 1692
>gi|37912838|gb|AAR05178.1| putative ATP-dependent RNA helicase [uncultured marine
proteobacterium ANT8C10]
Length = 635
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N++ L+ P + Q + V GK T + ST + GG + Q A+L DI+VATPG
Sbjct: 73 NVHALVLTPTRELAAQVRESVHSYGKLTNITSTAVFGGAKIFPQKAKLKKGVDILVATPG 132
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L +V + +KL +Q +V DEAD + +MGF
Sbjct: 133 RLLDLVNQKAVKLDQVQILVLDEADHMLDMGF 164
>gi|333985547|ref|YP_004514757.1| DEAD/DEAH box helicase [Methylomonas methanica MC09]
gi|333809588|gb|AEG02258.1| DEAD/DEAH box helicase domain protein [Methylomonas methanica MC09]
Length = 431
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q ++ V+ GK + + GG S++ Q ++ DIV+ATPGR L ++ + L
Sbjct: 86 LAMQVYESVRTYGKHLPFFAEAIYGGVSINPQIQKIQRGTDIVIATPGRLLDLIHQQHLS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q+ V DEADR+ +MGF
Sbjct: 146 LSHVQHFVLDEADRMLDMGF 165
>gi|395798906|ref|ZP_10478189.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|421139467|ref|ZP_15599506.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
gi|395337140|gb|EJF68998.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|404509383|gb|EKA23314.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
Length = 448
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|229591936|ref|YP_002874055.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
gi|229363802|emb|CAY51237.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
Length = 456
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 79 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 138
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 139 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 176
>gi|404401914|ref|ZP_10993498.1| DEAD/DEAH box helicase [Pseudomonas fuscovaginae UPB0736]
Length = 448
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKDVEVLVLDEADRMLDMGFAEDVQR 168
>gi|390448328|ref|ZP_10233949.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
gi|389666297|gb|EIM77749.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
Length = 453
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V+EL + L + +LGG S ++Q RL DI+VATPGR IV EL L+ +++V
Sbjct: 103 VRELSRHAHLATALVLGGVSRNSQVKRLAQGVDILVATPGRLTDIVRSGELSLAETRWLV 162
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 163 LDEADRMLDMGF 174
>gi|395500069|ref|ZP_10431648.1| DEAD/DEAH box helicase [Pseudomonas sp. PAMC 25886]
Length = 448
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ +V DEADR+ +MGF DV++
Sbjct: 131 RMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQR 168
>gi|394988697|ref|ZP_10381532.1| DEAD/DEAH box helicase domain-containingprotein [Sulfuricella
denitrificans skB26]
gi|393792076|dbj|GAB71171.1| DEAD/DEAH box helicase domain-containingprotein [Sulfuricella
denitrificans skB26]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q + V++ GK KL S ++GG +++ Q +L DI+VATPGR
Sbjct: 78 IRALILIPTRELAAQVEESVRDYGKHLKLNSMTMIGGVNINPQITKLRGRVDILVATPGR 137
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L V + + LS ++ +V DEADR+ +MGF
Sbjct: 138 LLDHVQQKTVDLSHVEILVLDEADRMLDMGF 168
>gi|320527000|ref|ZP_08028189.1| putative ATP-dependent RNA helicase RhlE [Solobacterium moorei
F0204]
gi|320132585|gb|EFW25126.1| putative ATP-dependent RNA helicase RhlE [Solobacterium moorei
F0204]
Length = 459
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F+ K+ G++ KL++ C+ GG Q L + DI++ATPGR +V+ E+ LS
Sbjct: 85 QIFENFKKFGRYLKLRACCVYGGAPSGPQRKALRSGCDILIATPGRLNDFMVQGEIILSD 144
Query: 77 IQYVVFDEADRLFEMGF 93
I+ V DEADR+ +MGF
Sbjct: 145 IEVFVLDEADRMLDMGF 161
>gi|440741996|ref|ZP_20921326.1| helicase [Pseudomonas syringae BRIP39023]
gi|440378082|gb|ELQ14712.1| helicase [Pseudomonas syringae BRIP39023]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|71736956|ref|YP_273717.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647906|ref|ZP_06479249.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422584568|ref|ZP_16659674.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598398|ref|ZP_16672660.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422680932|ref|ZP_16739203.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|71557509|gb|AAZ36720.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157456|gb|EFH98539.1| ATP-dependent RNA helicase SrmB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869381|gb|EGH04090.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330988677|gb|EGH86780.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010277|gb|EGH90333.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|66047019|ref|YP_236860.1| helicase [Pseudomonas syringae pv. syringae B728a]
gi|422673345|ref|ZP_16732705.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|424068921|ref|ZP_17806369.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440722920|ref|ZP_20903290.1| helicase [Pseudomonas syringae BRIP34876]
gi|440727353|ref|ZP_20907589.1| helicase [Pseudomonas syringae BRIP34881]
gi|63257726|gb|AAY38822.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Pseudomonas syringae pv. syringae B728a]
gi|330971079|gb|EGH71145.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|407996030|gb|EKG36527.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440360496|gb|ELP97768.1| helicase [Pseudomonas syringae BRIP34876]
gi|440364118|gb|ELQ01258.1| helicase [Pseudomonas syringae BRIP34881]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|424073352|ref|ZP_17810770.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407996213|gb|EKG36696.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|354548342|emb|CCE45078.1| hypothetical protein CPAR2_700820 [Candida parapsilosis]
Length = 559
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + ++EL K T + + GG S D+Q ++ +++VATPGR + ++ + + LSS
Sbjct: 230 QIYDNLQELTKNTSISCVAIYGGVSKDDQINKIRQGANVIVATPGRLVDLINDGAVDLSS 289
Query: 77 IQYVVFDEADRLFEMGFD 94
I Y+V DEADR+ E GF+
Sbjct: 290 INYLVLDEADRMLEKGFE 307
>gi|422667305|ref|ZP_16727169.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330977878|gb|EGH77781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|422616661|ref|ZP_16685366.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
gi|330896875|gb|EGH28465.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|416015105|ref|ZP_11562765.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|416028719|ref|ZP_11571636.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422404416|ref|ZP_16481469.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320325391|gb|EFW81456.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327468|gb|EFW83481.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330877269|gb|EGH11418.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|302188635|ref|ZP_07265308.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
642]
gi|443642767|ref|ZP_21126617.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
gi|443282784|gb|ELS41789.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|301384847|ref|ZP_07233265.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
Max13]
gi|302059212|ref|ZP_07250753.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
K40]
gi|302130851|ref|ZP_07256841.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422297602|ref|ZP_16385235.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
gi|422658705|ref|ZP_16721137.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331017330|gb|EGH97386.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407990944|gb|EKG32917.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|289676925|ref|ZP_06497815.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 382
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 8 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 67
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 68 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 105
>gi|289628314|ref|ZP_06461268.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
Length = 413
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 39 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 98
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 99 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 136
>gi|257486807|ref|ZP_05640848.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 410
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 36 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 95
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 96 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 133
>gi|237798870|ref|ZP_04587331.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021724|gb|EGI01781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 445
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 131 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 168
>gi|167625028|ref|YP_001675322.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167355050|gb|ABZ77663.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 437
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 29 TKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRL 88
T + S + GG S+D Q +L A D++VATPGR L V L LS I+Y+VFDEADR+
Sbjct: 128 TDVSSIVIYGGVSIDAQATKLAAGVDVIVATPGRLLDHVRRGTLNLSDIEYLVFDEADRM 187
Query: 89 FEMGF 93
+MGF
Sbjct: 188 LDMGF 192
>gi|449500065|ref|XP_004160994.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL- 72
+ QQ ++ GK + STCL GG S +Q + L + DIV+ TPGR L ++EME+
Sbjct: 199 LAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGVDIVIGTPGR-LKDLMEMEVC 257
Query: 73 KLSSIQYVVFDEADRLFEMGFDVEQQS 99
+L+ + +VV DEADR+ +MGF+ E +S
Sbjct: 258 RLAEVSFVVLDEADRMLDMGFEPEVRS 284
>gi|448535145|ref|XP_003870913.1| Dbp3 ATP-dependent DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
gi|380355269|emb|CCG24786.1| Dbp3 ATP-dependent DEAD-box RNA helicase [Candida orthopsilosis]
Length = 543
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + ++EL + T + + GG S D+Q ++ + ++VVATPGR + ++ + + LSS
Sbjct: 214 QIYDNLQELTQGTPISCVAIYGGVSKDDQVKKIRSGANVVVATPGRLVDLINDGAIDLSS 273
Query: 77 IQYVVFDEADRLFEMGFD 94
I Y+V DEADR+ E GF+
Sbjct: 274 INYLVLDEADRMLEKGFE 291
>gi|449453334|ref|XP_004144413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL- 72
+ QQ ++ GK + STCL GG S +Q + L + DIV+ TPGR L ++EME+
Sbjct: 199 LAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGVDIVIGTPGR-LKDLMEMEVC 257
Query: 73 KLSSIQYVVFDEADRLFEMGFDVEQQS 99
+L+ + +VV DEADR+ +MGF+ E +S
Sbjct: 258 RLAEVSFVVLDEADRMLDMGFEPEVRS 284
>gi|384156092|ref|YP_005538907.1| ATP-dependent RNA helicase [Arcobacter butzleri ED-1]
gi|345469646|dbj|BAK71097.1| ATP-dependent RNA helicase [Arcobacter butzleri ED-1]
Length = 435
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +S + GG ++ Q A L DI++ATPGR L ++ + L
Sbjct: 86 LAAQVAQSVETYGKYLPFKSAVIFGGVGINPQKALLKKGVDIIIATPGRLLDLISQDSLD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+++V DEADR+ +MGF
Sbjct: 146 LSKIEFLVLDEADRMLDMGF 165
>gi|315637497|ref|ZP_07892707.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri JV22]
gi|315478215|gb|EFU68938.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri JV22]
Length = 435
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +S + GG ++ Q A L DI++ATPGR L ++ + L
Sbjct: 86 LAAQVAQSVETYGKYLPFKSAVIFGGVGINPQKALLKKGVDIIIATPGRLLDLISQDSLD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+++V DEADR+ +MGF
Sbjct: 146 LSKIEFLVLDEADRMLDMGF 165
>gi|420138635|ref|ZP_14646534.1| ATP-dependent RNA helicase, partial [Pseudomonas aeruginosa CIG1]
gi|403248644|gb|EJY62201.1| ATP-dependent RNA helicase, partial [Pseudomonas aeruginosa CIG1]
Length = 191
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR L L
Sbjct: 88 LAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLEQRNAGNLP 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L I+ +V DEADR+ +MGF
Sbjct: 148 LQDIEVLVLDEADRMLDMGF 167
>gi|383769279|ref|YP_005448342.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium sp. S23321]
gi|381357400|dbj|BAL74230.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium sp. S23321]
Length = 526
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
G+ +L ST +GG M Q L D++VATPGR L +V LKLSS++++V DEA
Sbjct: 113 GRHIRLSSTLAIGGVPMGRQVRSLMQGVDVLVATPGRLLDLVQSNGLKLSSVEFLVLDEA 172
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 173 DRMLDMGF 180
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK +FTKL+ST ++GG S Q L DI++ATPGR L ++ + + L ++ +V
Sbjct: 111 VKAYSQFTKLRSTAIVGGVSQKTQERALQQGADILIATPGRLLDLMNQKRIDLQHVEILV 170
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 171 LDEADRMLDMGF 182
>gi|254428748|ref|ZP_05042455.1| DEAD/DEAH box helicase domain protein [Alcanivorax sp. DG881]
gi|196194917|gb|EDX89876.1| DEAD/DEAH box helicase domain protein [Alcanivorax sp. DG881]
Length = 450
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ LG++T +++ L GG+ Q A++ +P+I++ TPGR +
Sbjct: 77 LILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIE 136
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGFD 94
+ L L ++ +V DE+DR+ +MGF+
Sbjct: 137 HLDAGNLLLQDLEMLVLDESDRMLDMGFN 165
>gi|110835269|ref|YP_694128.1| DEAD/DEAH box helicase [Alcanivorax borkumensis SK2]
gi|110648380|emb|CAL17856.1| ATP-dependent RNA helicase, DEAD box family [Alcanivorax
borkumensis SK2]
Length = 450
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ LG++T +++ L GG+ Q A++ +P+I++ TPGR +
Sbjct: 77 LILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIE 136
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGFD 94
+ L L ++ +V DE+DR+ +MGF+
Sbjct: 137 HLDAGNLLLQDLEMLVLDESDRMLDMGFN 165
>gi|302786394|ref|XP_002974968.1| hypothetical protein SELMODRAFT_232454 [Selaginella moellendorffii]
gi|300157127|gb|EFJ23753.1| hypothetical protein SELMODRAFT_232454 [Selaginella moellendorffii]
Length = 408
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++E G ++ CL GG S Q++ L + DIVVATPGR V E K
Sbjct: 74 LAQQIAAVLEEAGASCGVKVVCLYGGSSKGPQYSSLRSGCDIVVATPGRLQDFVDEGVCK 133
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L I Y+V DEADR+ ++GF+
Sbjct: 134 LDQITYLVLDEADRMLDLGFE 154
>gi|302791241|ref|XP_002977387.1| hypothetical protein SELMODRAFT_232961 [Selaginella moellendorffii]
gi|300154757|gb|EFJ21391.1| hypothetical protein SELMODRAFT_232961 [Selaginella moellendorffii]
Length = 413
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ ++E G ++ CL GG S Q++ L + DIVVATPGR V E K
Sbjct: 74 LAQQIAAVLEEAGASCGVKVVCLYGGSSKGPQYSSLRSGCDIVVATPGRLQDFVDEGVCK 133
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L I Y+V DEADR+ ++GF+
Sbjct: 134 LDQITYLVLDEADRMLDLGFE 154
>gi|311280327|ref|YP_003942558.1| DEAD/DEAH box helicase [Enterobacter cloacae SCF1]
gi|308749522|gb|ADO49274.1| DEAD/DEAH box helicase domain protein [Enterobacter cloacae SCF1]
Length = 446
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E K+ ++S + GG S++ Q +L DI+VATPGR L + + LK
Sbjct: 87 LAAQVGENVREYSKYLNIRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNALK 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++ +V DEADR+ +MGF
Sbjct: 147 LDSVEVLVLDEADRMLDMGF 166
>gi|422634060|ref|ZP_16699144.1| helicase, partial [Pseudomonas syringae Cit 7]
gi|330955253|gb|EGH55513.1| helicase [Pseudomonas syringae Cit 7]
Length = 372
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQT K V+ +FT +++ + GG+ Q A L PDI++ TPGR L + L
Sbjct: 10 LAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEQLNAGNLD 69
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L ++ +V DEADR+ +MGF DVE+
Sbjct: 70 LKHVEVLVLDEADRMLDMGFSEDVER 95
>gi|28868793|ref|NP_791412.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969602|ref|ZP_03397738.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
gi|28852032|gb|AAO55107.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925698|gb|EEB59257.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
Length = 453
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 79 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 138
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R L + L L ++ +V DEADR+ +MGF DVE+
Sbjct: 139 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVER 176
>gi|241172335|ref|XP_002410726.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215494955|gb|EEC04596.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 658
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K GK + + C GG S Q L +IVVATPGR + ++
Sbjct: 267 LAQQIYLEAKRFGKVYGVGAICCFGGGSKWEQSKALQEGAEIVVATPGRMIDLIKMKATN 326
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L + ++V DEADR+F+MGF+ + +S CD
Sbjct: 327 LERVTFLVLDEADRMFDMGFEPQVRSICD 355
>gi|254443370|ref|ZP_05056846.1| DEAD/DEAH box helicase domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198257678|gb|EDY81986.1| DEAD/DEAH box helicase domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 469
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + + + GK L S C GG +++ Q ++L DI+VATPGR L + E
Sbjct: 84 LAAQVHQSILDYGKGVDLHSACFFGGVNINPQISKLRRGLDIIVATPGRLLDLCQRREAN 143
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +I+ +V DEADR+ +MGF
Sbjct: 144 LGAIETLVLDEADRMLDMGF 163
>gi|147904944|ref|NP_001086205.1| MGC84147 protein [Xenopus laevis]
gi|49522819|gb|AAH74323.1| MGC84147 protein [Xenopus laevis]
Length = 450
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 336 LCQQIHNECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 395
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 396 LQRVTYLVFDEADRMFDMGFEYQVRS 421
>gi|157737720|ref|YP_001490403.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri RM4018]
gi|157699574|gb|ABV67734.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri RM4018]
Length = 435
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +S + GG ++ Q A L DI++ATPGR L ++ + L
Sbjct: 86 LAAQVAQSVETYGKYLPFKSAVIFGGVGINPQKALLKKGVDIIIATPGRLLDLISQDSLD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+++V DEADR+ +MGF
Sbjct: 146 LSKIEFLVLDEADRMLDMGF 165
>gi|75908173|ref|YP_322469.1| DEAD/DEAH box helicase [Anabaena variabilis ATCC 29413]
gi|75701898|gb|ABA21574.1| DEAD/DEAH box helicase-like protein [Anabaena variabilis ATCC
29413]
Length = 426
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V++ GK+ L S + GG S++ Q RL DI+VATPGR L V + + LS I+ +V
Sbjct: 97 VRDYGKYLNLNSMVMFGGVSINPQKQRLKGRVDILVATPGRLLDHVQQGTVNLSQIEILV 156
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 157 LDEADRMLDMGF 168
>gi|425898142|ref|ZP_18874733.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397891895|gb|EJL08373.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 445
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RLIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVD 171
>gi|195432050|ref|XP_002064039.1| GK19923 [Drosophila willistoni]
gi|194160124|gb|EDW75025.1| GK19923 [Drosophila willistoni]
Length = 917
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I+V TPGR + H++
Sbjct: 348 LVMQTYELLQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILVGTPGRLVDHLLHTAS 407
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+S+Q++V DEADRL E+G+ DV+Q
Sbjct: 408 FKLTSLQFLVLDEADRLLELGYERDVQQ 435
>gi|119897299|ref|YP_932512.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
gi|119669712|emb|CAL93625.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
Length = 494
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q ++ VK K L++TC+ GG M+ Q L +IV+ATPGR L V + +
Sbjct: 89 LAMQVYESVKTYSKHLPLRATCIYGGVDMNPQIQELRRGIEIVIATPGRLLDHVQQKTIN 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+ ++ +V DEADR+ +MGF
Sbjct: 149 LTQVEMLVLDEADRMLDMGF 168
>gi|75061727|sp|Q5R7D1.1|DDX42_PONAB RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|55731230|emb|CAH92329.1| hypothetical protein [Pongo abelii]
Length = 942
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|206725493|ref|NP_001126368.1| ATP-dependent RNA helicase DDX42 [Pongo abelii]
Length = 942
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q V++L +FT + S ++GG S Q L A PDIVVATPGR L H+ + + L
Sbjct: 214 QVHSMVQKLAQFTDVTSAIVVGGLSSKVQEVALRARPDIVVATPGRMLDHLQNSLSVGLE 273
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+ +V DEADRL E+GF E
Sbjct: 274 DLSILVLDEADRLLELGFTQE 294
>gi|384172779|ref|YP_005554156.1| ATP-dependent RNA helicase [Arcobacter sp. L]
gi|345472389|dbj|BAK73839.1| ATP-dependent RNA helicase [Arcobacter sp. L]
Length = 448
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +S + GG ++ Q A L DI++ATPGR L ++ + L
Sbjct: 85 LAAQVAQSVETYGKYLPFKSAVIFGGVGINPQKALLKKGVDIIIATPGRLLDLISQDSLN 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I++++ DEADR+ +MGF
Sbjct: 145 LSKIEFLILDEADRMLDMGF 164
>gi|399004628|ref|ZP_10707239.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
gi|398129239|gb|EJM18612.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
Length = 445
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RLIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVD 171
>gi|389685466|ref|ZP_10176790.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
gi|388551119|gb|EIM14388.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
Length = 445
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I LI P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 71 SIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
R + + L L ++ +V DEADR+ +MGF + Q D
Sbjct: 131 RLIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVD 171
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK +FTKL+ST ++GG S Q L DI++ATPGR L ++ + + L ++ +V
Sbjct: 95 VKAYSQFTKLRSTAIVGGVSQKTQERALQQGADILIATPGRLLDLMNQKHVDLQHVEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK +FTKL+ST ++GG S Q L DI++ATPGR L ++ + + L ++ +V
Sbjct: 95 VKAYSQFTKLRSTAIVGGVSQKTQERALQQGADILIATPGRLLDLMNQKHVDLQHVEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V + GK+T L+S + GG M+ Q +L +I+VATPGR L V + +
Sbjct: 89 LADQVYDNVAKYGKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVN 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSQVRMLVLDEADRMLDMGF 168
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V + GK+T L+S + GG M+ Q +L +I+VATPGR L V + +
Sbjct: 103 LADQVYDNVAKYGKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVN 162
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 163 LSQVRMLVLDEADRMLDMGF 182
>gi|163750030|ref|ZP_02157274.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161330304|gb|EDQ01285.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 436
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 21 FVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYV 80
FVK K T+L+S + GG S+D Q L A DI+VATPGR L + + LS ++++
Sbjct: 121 FVK-YAKLTQLKSALVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGSMSLSELEFL 179
Query: 81 VFDEADRLFEMGFDVE 96
VFDEADR+ +MGF E
Sbjct: 180 VFDEADRMLDMGFKDE 195
>gi|300088260|ref|YP_003758782.1| DEAD/DEAH box helicase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527993|gb|ADJ26461.1| DEAD/DEAH box helicase domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 429
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + VK L + T L++ + GG M+ Q A+L A DIV+A PGR L V + +
Sbjct: 82 LAEQIYDSVKTLSQHTGLRAMAIYGGVGMEPQKAKLRAGTDIVIACPGRLLDHVWQGTID 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
++ +V DEADR+F+MGF
Sbjct: 142 FDDVEMLVIDEADRMFDMGF 161
>gi|329897169|ref|ZP_08271909.1| ATP-dependent RNA helicase RhlB [gamma proteobacterium IMCC3088]
gi|328921324|gb|EGG28718.1| ATP-dependent RNA helicase RhlB [gamma proteobacterium IMCC3088]
Length = 397
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMEL 72
+V Q + K+LGK+T L+ L+GG Q +L P D+VVATPGR + + +L
Sbjct: 102 LVMQIAEDAKDLGKYTGLRVVTLIGGMDYQKQLQKLDQEPVDLVVATPGRLIDFMTRQDL 161
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L ++ +V DEADR+ +MGF
Sbjct: 162 FLDRVETIVLDEADRMLDMGF 182
>gi|284007123|emb|CBA72399.1| ATP-dependent RNA helicase [Arsenophonus nasoniae]
Length = 438
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ +F +L+S + GG S++ Q +L DI+VATPGR L +V + +
Sbjct: 93 LAAQVGQNVRNYSQFLRLKSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLVQQNAVS 152
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 153 LSQVEILVLDEADRMLDMGF 172
>gi|449516409|ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q +++L +FT ++ ++GG S Q A L + PD+VVATPGR + H+ M + L
Sbjct: 221 QVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLD 280
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+ ++ DEADRL E+GF E
Sbjct: 281 DLAVLILDEADRLLELGFSAE 301
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK +FTKL+ST ++GG S Q L DI++ATPGR + ++ + + L ++ +V
Sbjct: 95 VKAYSQFTKLRSTAIVGGVSQKTQERALQQGADILIATPGRLIDLINQKHVDLQHVEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F K+ G++ L++ CL GG Q L DI+VATPGR L + + + LSS
Sbjct: 146 QIFDNFKKYGRYLHLRTVCLYGGAKRGPQIGALRRGADILVATPGRLLDFMGQDLVDLSS 205
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEADR+ +MGF
Sbjct: 206 VEILVLDEADRMLDMGF 222
>gi|374367571|ref|ZP_09625632.1| helicase [Cupriavidus basilensis OR16]
gi|373100874|gb|EHP41934.1| helicase [Cupriavidus basilensis OR16]
Length = 496
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V +FT L+ST + GG M+ Q L +I+VATPGR L V + +
Sbjct: 101 LADQVYDNVARYARFTDLRSTVVFGGVDMNPQTEALRRGVEILVATPGRLLDHVQQKSVN 160
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 161 LSQVQMLVLDEADRMLDMGF 180
>gi|297733718|emb|CBI14965.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
++ I ++ KF G FTK++STC+ GG Q L +IV+ATPGR + ++
Sbjct: 381 LAVQIQEEALKF----GSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA 436
Query: 70 MELKLSSIQYVVFDEADRLFEMGFD 94
L + Y+V DEADR+ +MGF+
Sbjct: 437 QHTNLRRVTYLVLDEADRMLDMGFE 461
>gi|225456912|ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
vinifera]
Length = 611
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
++ I ++ KF G FTK++STC+ GG Q L +IV+ATPGR + ++
Sbjct: 274 LAVQIQEEALKF----GSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA 329
Query: 70 MELKLSSIQYVVFDEADRLFEMGFD 94
L + Y+V DEADR+ +MGF+
Sbjct: 330 QHTNLRRVTYLVLDEADRMLDMGFE 354
>gi|54302687|ref|YP_132680.1| ATP-dependent RNA helicase [Photobacterium profundum SS9]
gi|46916111|emb|CAG22880.1| putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
Length = 431
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G N+ LI P + Q + + E K+T L++ + GG M +Q L DI+VA
Sbjct: 71 GRFNVRALILAPTRELAAQIAQNIAEYTKYTDLKTAAIYGGTKMSSQERTLEKGVDILVA 130
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR + V + L++I+++VFDEADR+ +MGF
Sbjct: 131 TPGRLIEHVDLKNVSLANIEFLVFDEADRMLDMGF 165
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF KELG +++ ++GG S ++Q +L +IV+ATPGR + ++ +
Sbjct: 455 IEEETIKFGKELG----IRTVAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVLENRYIV 510
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
LS YVV DEADR+ +MGF+ + Q D
Sbjct: 511 LSQCTYVVLDEADRMIDMGFEPDVQKILD 539
>gi|399017820|ref|ZP_10720009.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398102587|gb|EJL92767.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 504
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q VK +FT L+ST + GG M Q A L +IV+ATPGR L V + +
Sbjct: 104 LADQVADNVKAYSRFTPLRSTVVFGGVDMAPQTATLRGGVEIVIATPGRLLDHVQQKTVN 163
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS Q +V DEADR+ +MGF
Sbjct: 164 LSQTQILVMDEADRMLDMGF 183
>gi|449460106|ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q +++L +FT ++ ++GG S Q A L + PD+VVATPGR + H+ M + L
Sbjct: 221 QVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLD 280
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+ ++ DEADRL E+GF E
Sbjct: 281 DLAVLILDEADRLLELGFSAE 301
>gi|254251488|ref|ZP_04944806.1| Superfamily I DNA and RNA helicase [Burkholderia dolosa AUO158]
gi|124894097|gb|EAY67977.1| Superfamily I DNA and RNA helicase [Burkholderia dolosa AUO158]
Length = 480
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 91 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 150
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LSS+ +V DEADR+ +MGF
Sbjct: 151 LSSLDILVLDEADRMLDMGF 170
>gi|90414211|ref|ZP_01222192.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
gi|90324761|gb|EAS41299.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
Length = 431
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G N+ LI P + Q + + E K+T L++ + GG M +Q L DI+VA
Sbjct: 71 GRFNVRALILAPTRELAAQIAQNIAEYTKYTDLKTAAIYGGTKMSSQERTLEKGVDILVA 130
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR + V + L++I+++VFDEADR+ +MGF
Sbjct: 131 TPGRLIEHVDLKNVSLTNIEFLVFDEADRMLDMGF 165
>gi|255319460|ref|ZP_05360674.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens SK82]
gi|262378516|ref|ZP_06071673.1| superfamily II DNA and RNA helicase [Acinetobacter radioresistens
SH164]
gi|421856913|ref|ZP_16289271.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255303400|gb|EET82603.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens SK82]
gi|262299801|gb|EEY87713.1| superfamily II DNA and RNA helicase [Acinetobacter radioresistens
SH164]
gi|403187660|dbj|GAB75472.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 383
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ PI +Q ++ KEL KFT L LLGG D Q
Sbjct: 62 INDLLNNPIKEQRYRGEARALILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDKQ 121
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
+L + DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 122 KKQLDQNFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 170
>gi|421464012|ref|ZP_15912705.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
gi|400206386|gb|EJO37363.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
Length = 383
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ PI +Q ++ KEL KFT L LLGG D Q
Sbjct: 62 INDLLNNPIKEQRYRGEARALILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDKQ 121
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
+L + DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 122 KKQLDQNFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 170
>gi|420249963|ref|ZP_14753195.1| DNA/RNA helicase, superfamily II [Burkholderia sp. BT03]
gi|398063077|gb|EJL54833.1| DNA/RNA helicase, superfamily II [Burkholderia sp. BT03]
Length = 513
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 87 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALRRGVDIVVATPGRLLDHMQQKTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSHLEILVLDEADRMLDMGF 166
>gi|390571862|ref|ZP_10252096.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
gi|389936192|gb|EIM98086.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
Length = 513
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 87 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALRRGVDIVVATPGRLLDHMQQKTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSHLEILVLDEADRMLDMGF 166
>gi|226941463|ref|YP_002796537.1| RhlE4 [Laribacter hongkongensis HLHK9]
gi|226716390|gb|ACO75528.1| RhlE4 [Laribacter hongkongensis HLHK9]
Length = 457
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q V+ K+ L+ TC+ GG +MD Q A L DIVVATPGR L + + ++
Sbjct: 90 LADQIAASVQSYTKYLPLRHTCVFGGVNMDPQKADLMRGMDIVVATPGRLLDHLEQKTIQ 149
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+ ++ +V DEADR+ +MGF
Sbjct: 150 LNRVEMLVLDEADRMLDMGF 169
>gi|186475195|ref|YP_001856665.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phymatum STM815]
gi|184191654|gb|ACC69619.1| DEAD/DEAH box helicase domain protein [Burkholderia phymatum
STM815]
Length = 522
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 87 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALRRGVDIVVATPGRLLDHMQQKTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSHLEILVLDEADRMLDMGF 166
>gi|225434327|ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
gi|297745752|emb|CBI15808.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ K VK + ++ ++GG ++ Q + L A +IVVATPGRF+H + E
Sbjct: 208 LAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRSELRAGVNIVVATPGRFIHHLQEGNT 267
Query: 73 KLSSIQYVVFDEADRLFEMGFD 94
LS I +VV DEADR+ +MGF+
Sbjct: 268 SLSRISFVVLDEADRMLDMGFE 289
>gi|109898646|ref|YP_661901.1| DEAD/DEAH box helicase [Pseudoalteromonas atlantica T6c]
gi|109700927|gb|ABG40847.1| DEAD/DEAH box helicase-like protein [Pseudoalteromonas atlantica
T6c]
Length = 426
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + KFT + T L GG + Q ++L A DIV++TPGR L + ++
Sbjct: 86 LAEQLATNIANYAKFTDISVTALYGGVKLGGQASKLSAGVDIVISTPGRLLEHMTLKNVE 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+++++VV DEADR+ +MGF DV Q
Sbjct: 146 LANVEFVVLDEADRMLDMGFIADVRQ 171
>gi|374366617|ref|ZP_09624693.1| RNA helicase [Cupriavidus basilensis OR16]
gi|373101750|gb|EHP42795.1| RNA helicase [Cupriavidus basilensis OR16]
Length = 577
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+S + GG ++ Q +L DIVVATPGR L + + +
Sbjct: 101 LAAQVEESVRNYGKYLKLRSMVMFGGVGINPQIEQLKRGVDIVVATPGRLLDHLSQRTID 160
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 161 LSHVEMLVLDEADRMLDMGF 180
>gi|378768016|ref|YP_005196486.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
gi|365187499|emb|CCF10449.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
Length = 449
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V E KF L+S + GG S++ Q +L DI+VATPGR L +V + +
Sbjct: 87 LAAQVGENVVEYSKFLPLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLVHQNAVD 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSQVEVLVLDEADRMLDMGF 166
>gi|354604010|ref|ZP_09022003.1| hypothetical protein HMPREF9450_00918 [Alistipes indistinctus YIT
12060]
gi|353348442|gb|EHB92714.1| hypothetical protein HMPREF9450_00918 [Alistipes indistinctus YIT
12060]
Length = 645
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 9 LISFPIVQQTFKFVKEL---GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + + +EL K++KL T + GG SM Q RL DIVV TPGR L
Sbjct: 80 LILVPTRELALQVTEELLSFNKYSKLVITAIYGGASMSEQLRRLGKGVDIVVGTPGRILD 139
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF--DVE 96
+ L L +QY++ DEAD + MGF DVE
Sbjct: 140 HLRRGTLNLKELQYLILDEADEMLNMGFIDDVE 172
>gi|308197153|gb|ADO17669.1| CNB00610 [Tremella mesenterica]
Length = 700
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA-DRLF 89
L+ ++GG+S+D+ F L PD+VVATPGR LH++VEM L L +++ V+ + LF
Sbjct: 145 LRWAIIMGGESLDDHFEVLSGKPDVVVATPGRMLHLIVEMSLDLRTLEMVITTKPIGELF 204
Query: 90 EMGFDVE 96
EMGF+ +
Sbjct: 205 EMGFESQ 211
>gi|28211624|ref|NP_782568.1| ATP-dependent RNA helicase [Clostridium tetani E88]
gi|28204066|gb|AAO36505.1| ATP-dependent RNA helicase [Clostridium tetani E88]
Length = 524
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q +K + + K+TK + + GGDS+D Q L DIV+ TPGR ++ L LS
Sbjct: 87 QVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLKKGIDIVIGTPGRVQDLINRKALNLSH 146
Query: 77 IQYVVFDEADRLFEMGF--DVEQ 97
I+++V DEAD + MGF D+E
Sbjct: 147 IEFLVLDEADEMLNMGFVDDIEN 169
>gi|194868558|ref|XP_001972305.1| GG13958 [Drosophila erecta]
gi|190654088|gb|EDV51331.1| GG13958 [Drosophila erecta]
Length = 786
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +I+VATPGR + +V L
Sbjct: 355 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRR 414
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ Y+V DEADR+F MGF+ + +S C+
Sbjct: 415 VTYLVLDEADRMFHMGFEPQVRSICN 440
>gi|350559286|ref|ZP_08928126.1| DEAD/DEAH box helicase domain protein, partial [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781554|gb|EGZ35837.1| DEAD/DEAH box helicase domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 407
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V E G++ KL+S + GG +++ Q L + DIVVATPGR L V + + LS ++ +V
Sbjct: 99 VTEYGRYLKLRSMVVFGGVNINPQIQALRSPMDIVVATPGRLLDHVGQKTVDLSGVEILV 158
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 159 LDEADRMLDMGF 170
>gi|297846156|ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336801|gb|EFH67218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + E G+ L+S C+ GG S Q + + DIV+ TPGR ++ EL+LS
Sbjct: 208 QISDVLSEAGEPCGLKSICVYGGSSKRPQINAIRSGVDIVIGTPGRLRDLIESNELRLSD 267
Query: 77 IQYVVFDEADRLFEMGFD 94
+ +VV DEADR+ +MGF+
Sbjct: 268 VSFVVLDEADRMLDMGFE 285
>gi|372270527|ref|ZP_09506575.1| ATP-dependent DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 460
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + VK+L FT++ + GG Q A + +P+++VATPGR + L
Sbjct: 90 LAEQVCQSVKDLAAFTRVNVMTVCGGTGFKEQAAEMRKNPEVLVATPGRLAEHLERQTLD 149
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L ++Y+V DEADR+ +MGF E + D
Sbjct: 150 LDDLEYLVLDEADRMLDMGFRDEVMAIVD 178
>gi|295677616|ref|YP_003606140.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295437459|gb|ADG16629.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 518
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 87 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALKRGVDIVVATPGRLLDHMQQKTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSHLEILVLDEADRMLDMGF 166
>gi|209518298|ref|ZP_03267123.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209501217|gb|EEA01248.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 443
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 87 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALKRGVDIVVATPGRLLDHMQQKTID 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSHLEILVLDEADRMLDMGF 166
>gi|409405536|ref|ZP_11253998.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386434085|gb|EIJ46910.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 513
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + Q + V++ GK+ L S C+ GG + Q A L DI+VA
Sbjct: 73 GHLPIRALILAPTRELAAQVEESVRQYGKYLPLTSACIFGGVGIHPQIALLKRGVDILVA 132
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + + L IQ +V DEADR+ +MGF
Sbjct: 133 TPGRLLDHMQQGTVNLQHIQILVLDEADRMLDMGF 167
>gi|147801232|emb|CAN75572.1| hypothetical protein VITISV_009507 [Vitis vinifera]
Length = 489
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ K VK + ++ ++GG ++ Q + L A +IVVATPGRF+H + E
Sbjct: 208 LAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRSELRAGVNIVVATPGRFIHHLQEGNT 267
Query: 73 KLSSIQYVVFDEADRLFEMGFD 94
LS I +VV DEADR+ +MGF+
Sbjct: 268 SLSRISFVVLDEADRMLDMGFE 289
>gi|391336487|ref|XP_003742611.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Metaseiulus occidentalis]
Length = 662
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 9 LISFPIVQQTFKFVKELGKFT--KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHI 66
L+ P + + E K+T + S C GG +Q ++L +P+IV+ATPGR +
Sbjct: 362 LVLSPTRELAIQIYDESRKYTYRNINSACCYGGACRGDQMSQLRKNPEIVIATPGRLNDL 421
Query: 67 VVEMELKLSSIQYVVFDEADRLFEMGFD 94
V M + L + Y+V DEADR+ +MGF+
Sbjct: 422 VEMMAVSLRKVSYLVLDEADRMLDMGFE 449
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK + T L+ST + GG M Q A L A +IV+ATPGR L V + L
Sbjct: 104 LADQVAENVKAYCRHTPLRSTVVFGGMDMAPQTAALRAGVEIVIATPGRLLDHVQQKTLN 163
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS Q +V DEADR+ +MGF
Sbjct: 164 LSQTQILVMDEADRMLDMGF 183
>gi|343510871|ref|ZP_08748064.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
gi|342800061|gb|EGU35605.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
Length = 426
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + V++ K+T+L+S + GG+ M +Q L DI+VATPGR + + +
Sbjct: 86 LVAQIAQNVRDYTKYTELKSVAIYGGEKMASQQKALEQGVDILVATPGRLIEHLELKNVS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++++VFDEADR+ +MGF
Sbjct: 146 LVNLEFLVFDEADRMLDMGF 165
>gi|301118572|ref|XP_002907014.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108363|gb|EEY66415.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 2091
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + ++ K L++T + GG S+ Q A L DIV+ TPGR + I+ K
Sbjct: 1575 LAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGK 1634
Query: 74 LSSIQ---YVVFDEADRLFEMGFD 94
+ S+Q YVV DEADR+F+MGF+
Sbjct: 1635 MVSLQRVTYVVLDEADRMFDMGFE 1658
>gi|440637394|gb|ELR07313.1| hypothetical protein GMDG_02493 [Geomyces destructans 20631-21]
Length = 582
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q+++ + +L + +Q+ C+ GG + D Q R + DIVVATPGR ++ E
Sbjct: 250 LAMQSYEQINKLAALSGMQAVCVYGGVAKDEQ-RRALKTADIVVATPGRLNDLIQEGSAD 308
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCDTS 104
LS + YVV DEADR+ + GF+ E + +T+
Sbjct: 309 LSKVSYVVLDEADRMLDKGFEEEIRKIINTA 339
>gi|343505788|ref|ZP_08743340.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
gi|342806221|gb|EGU41455.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
Length = 426
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + V++ K+T+L+S + GG+ M +Q L DI+VATPGR + + +
Sbjct: 86 LVAQIAQNVRDYTKYTELKSVAIYGGEKMASQQKALEQGVDILVATPGRLIEHLELKNVS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++++VFDEADR+ +MGF
Sbjct: 146 LVNLEFLVFDEADRMLDMGF 165
>gi|408375064|ref|ZP_11172741.1| DEAD/DEAH box helicase [Alcanivorax hongdengensis A-11-3]
gi|407765040|gb|EKF73500.1| DEAD/DEAH box helicase [Alcanivorax hongdengensis A-11-3]
Length = 460
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ L ++T +++ + GG+ Q AR+ +P+I++ TPGR +
Sbjct: 77 LILLPTRELAQQTLKQVEALARYTFIKAELVTGGEDFKVQAARMRKNPEILIGTPGRLIE 136
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
+ L+L ++ ++ DE+DR+ +MGF
Sbjct: 137 HLEAGNLRLQDLEVLILDESDRMLDMGF 164
>gi|300311049|ref|YP_003775141.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300073834|gb|ADJ63233.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 520
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + Q + V++ GK+ L S C+ GG ++ Q L DI+VA
Sbjct: 73 GHVPIRALILAPTRELAAQVEESVRQYGKYLPLTSACIFGGVGINPQITLLKRGVDILVA 132
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + + L IQ +V DEADR+ +MGF
Sbjct: 133 TPGRLLDHMQQGTVNLQHIQILVLDEADRMLDMGF 167
>gi|408672779|ref|YP_006872527.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
gi|387854403|gb|AFK02500.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
Length = 458
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q K V EL K+T L+ L GG Q + A DI+VATPGRF+ + + E+
Sbjct: 87 LVMQIDKAVGELAKYTDLRHVALYGGLGPKTQIEAVQAGVDIIVATPGRFMDLYLRGEIG 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+ I+ +V DEAD++ +MGF
Sbjct: 147 VKEIKIMVLDEADKMMDMGF 166
>gi|386726622|ref|YP_006192948.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|384093747|gb|AFH65183.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 479
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + V+EL K T L+ L+GG S+D Q +L P IVV TPGR +V +LKL
Sbjct: 89 QIVQTVEELTKGTGLRVQQLIGGASIDRQIDKLRTKPQIVVGTPGRVQELVKLRKLKLHG 148
Query: 77 IQYVVFDEADRLFEMGF--DVE 96
I+ VV DE D++FE+G DVE
Sbjct: 149 IKTVVVDEVDQVFELGSMQDVE 170
>gi|379723868|ref|YP_005315999.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|378572540|gb|AFC32850.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
Length = 510
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + V+EL K T L+ L+GG S+D Q +L P IVV TPGR +V +LKL
Sbjct: 89 QIVQTVEELTKGTGLRVQQLIGGASIDRQIDKLRTKPQIVVGTPGRVQELVKLRKLKLHG 148
Query: 77 IQYVVFDEADRLFEMGF--DVE 96
I+ VV DE D++FE+G DVE
Sbjct: 149 IKTVVVDEVDQVFELGSMQDVE 170
>gi|350551951|ref|ZP_08921160.1| DEAD/DEAH box helicase domain protein [Thiorhodospira sibirica ATCC
700588]
gi|349795594|gb|EGZ49390.1| DEAD/DEAH box helicase domain protein [Thiorhodospira sibirica ATCC
700588]
Length = 445
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 14 IVQQTFKFVKELG-KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ K VK G K L + CL+GG Q +L D+VVATPGR + + +L
Sbjct: 85 LAQQVEKAVKTYGRKLRWLNTACLVGGAPFIAQAKQLSRPVDVVVATPGRLIDHLNRRKL 144
Query: 73 KLSSIQYVVFDEADRLFEMGF--DVE 96
KLS +Q ++ DEADR+ +MGF D+E
Sbjct: 145 KLSDVQMLILDEADRMLDMGFAEDIE 170
>gi|339494741|ref|YP_004715034.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338802113|gb|AEJ05945.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 443
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
R + + L L ++ +V DEADR+ +MGF + Q
Sbjct: 131 RLIEHLNAGSLILKDVEILVIDEADRMLDMGFAEDMQ 167
>gi|386021403|ref|YP_005939427.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 4166]
gi|327481375|gb|AEA84685.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 4166]
Length = 443
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
R + + L L ++ +V DEADR+ +MGF + Q
Sbjct: 131 RLIEHLNAGNLILKDVEVLVIDEADRMLDMGFAEDMQ 167
>gi|330818246|ref|YP_004361951.1| DEAD/DEAH box helicase [Burkholderia gladioli BSR3]
gi|327370639|gb|AEA61995.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
gladioli BSR3]
Length = 505
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYGKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+S + +V DEADR+ +MGF
Sbjct: 148 VSQLDILVLDEADRMLDMGF 167
>gi|238028570|ref|YP_002912801.1| ATP-dependent RNA helicase [Burkholderia glumae BGR1]
gi|237877764|gb|ACR30097.1| ATP-dependent RNA helicase [Burkholderia glumae BGR1]
Length = 483
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYGKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+S + +V DEADR+ +MGF
Sbjct: 148 VSQLDILVLDEADRMLDMGF 167
>gi|443472863|ref|ZP_21062888.1| ATP-dependent RNA helicase SrmB [Pseudomonas pseudoalcaligenes
KF707]
gi|442903426|gb|ELS28717.1| ATP-dependent RNA helicase SrmB [Pseudomonas pseudoalcaligenes
KF707]
Length = 442
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + QQT K V+ +FT ++S + GG+ Q A L PD++V+TPGR
Sbjct: 72 IRSLILLPTRELAQQTLKEVERFSQFTFIKSGIVTGGEDFKVQAAMLRKLPDVLVSTPGR 131
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ + + L ++ +V DEADR+ +MGF + Q
Sbjct: 132 LIEHLNAGTVDLREVEVLVLDEADRMLDMGFAEDMQ 167
>gi|355564184|gb|EHH20684.1| Putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENCSLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YV+ DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVILDEADRMIDMGFEPDVQ 564
>gi|323356162|gb|EGA87967.1| Prp5p [Saccharomyces cerevisiae VL3]
Length = 518
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 3 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 62
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 63 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 95
>gi|85816749|gb|EAQ37935.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 425
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+E K+ ++ST + GG + + Q + DI+VATPGR L + + L
Sbjct: 85 LAAQIYDNVREYSKYVDIKSTVIFGGVNQNPQVRTIRQGVDILVATPGRLLDLENQGLLS 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+++V DEADR+ +MGF
Sbjct: 145 LSDIEFLVLDEADRMLDMGF 164
>gi|449702259|gb|EMD42932.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
Length = 555
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ ++ + T ++S C+ GG Q + DI+VATPGR L+ + + LS
Sbjct: 210 QQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLS 269
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
S++Y++FDEADR+ +MGF+ + + C+
Sbjct: 270 SVRYLIFDEADRMLDMGFEPQIREICE 296
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q ++ +L K+TKL++ ++G +M Q A L +P++++ATPGR + H+ + L
Sbjct: 275 QIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRGNPEVIIATPGRLIDHLQNSRSIDLD 334
Query: 76 SIQYVVFDEADRLFEMGFDVEQQS 99
+++ ++FDEAD+L ++GF+ Q+
Sbjct: 335 NLEVLIFDEADKLLDLGFEAAAQN 358
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q V++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 255 IRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPGR 314
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + V+ DEADRL E+GF E Q
Sbjct: 315 IIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQ 351
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q V++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 239 IRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPGR 298
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + V+ DEADRL E+GF E Q
Sbjct: 299 IIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQ 335
>gi|334130724|ref|ZP_08504514.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
gi|333444124|gb|EGK72080.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
Length = 480
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK K L+S+C+ GG M Q A L +IVVATPGR L V +
Sbjct: 89 LAMQVHESVKTYSKHLPLRSSCIYGGVDMKAQVAELREGREIVVATPGRLLDHVEGKTVN 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +Q +V DEADR+ +MGF
Sbjct: 149 LGQVQMLVLDEADRMLDMGF 168
>gi|330448509|ref|ZP_08312157.1| DEAD-box-containing ATP-dependent RNA helicase family member
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492700|dbj|GAA06654.1| DEAD-box-containing ATP-dependent RNA helicase family member
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 432
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ LI P + +Q + + K+T + T + GG M +Q RL DI+VATPG
Sbjct: 74 NVRALILAPTRELAEQIANNISDYTKYTSITCTAVFGGKKMSSQEKRLEQGVDILVATPG 133
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R + + + L+++++++FDEADR+ +MGF
Sbjct: 134 RLIEHMELNNVSLANLEFLIFDEADRMLDMGF 165
>gi|343515522|ref|ZP_08752575.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
gi|342798212|gb|EGU33838.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
Length = 426
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + V++ K+T+L+S + GG+ M +Q L DI+VATPGR + + +
Sbjct: 86 LVAQIAQNVRDYTKYTELKSVAIYGGEKMASQQKALELGVDILVATPGRLIEHLELKNVS 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++++VFDEADR+ +MGF
Sbjct: 146 LVNLEFLVFDEADRMLDMGF 165
>gi|335420259|ref|ZP_08551297.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
gi|334894618|gb|EGM32803.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
Length = 437
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK ++ST + GG Q A+ DIVVATPGR L ++ E
Sbjct: 82 LAAQVNESVRTYGKSGAIRSTVIFGGVGYQPQIAQFKKGVDIVVATPGRLLDLLQEGHAD 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+IQ +V DEADR+ +MGF
Sbjct: 142 LSNIQTLVLDEADRMLDMGF 161
>gi|332653730|ref|ZP_08419474.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
gi|332516816|gb|EGJ46421.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
Length = 391
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 22 VKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYV 80
+++L F + +++ CL GG +D Q +L P IVVATPGR + V ++L +Q V
Sbjct: 100 LRDLCAFKEGVRTVCLYGGQPIDKQITQLKKDPQIVVATPGRLMDHVKRRTVRLDKVQTV 159
Query: 81 VFDEADRLFEMGF 93
V DEADR+ +MGF
Sbjct: 160 VLDEADRMLDMGF 172
>gi|365969640|ref|YP_004951201.1| ATP-dependent RNA helicase rhlE [Enterobacter cloacae EcWSU1]
gi|365748553|gb|AEW72780.1| ATP-dependent RNA helicase rhlE [Enterobacter cloacae EcWSU1]
Length = 460
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V+E ++ ++S + GG S++ Q +L D++VATPGR L + + LKL SI+ +V
Sbjct: 95 VREYSRYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNALKLDSIEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|256424779|ref|YP_003125432.1| DEAD/DEAH box helicase [Chitinophaga pinensis DSM 2588]
gi|256039687|gb|ACU63231.1| DEAD/DEAH box helicase domain protein [Chitinophaga pinensis DSM
2588]
Length = 492
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 2 GFANINYLISFPI------VQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDI 55
G NI LI P +Q++F GKF L+S + GG S Q L DI
Sbjct: 100 GLRNIKALILTPTRELAIQIQESFT---AYGKFLDLKSLVIFGGVSQHPQTEALKKGVDI 156
Query: 56 VVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
++ATPGR L ++ + + L I+Y V DEADR+ +MGF DV++
Sbjct: 157 LIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQR 200
>gi|444726996|gb|ELW67506.1| ATP-dependent RNA helicase DDX42 [Tupaia chinensis]
Length = 939
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 44/80 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 234 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 293
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L + Y+VFDEADR+F+MGF
Sbjct: 294 LQRVSYLVFDEADRMFDMGF 313
>gi|427710423|ref|YP_007052800.1| DEAD/DEAH box helicase [Nostoc sp. PCC 7107]
gi|427362928|gb|AFY45650.1| DEAD/DEAH box helicase domain protein [Nostoc sp. PCC 7107]
Length = 476
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V+E K+ KL + + GG S++ Q L DI+VATPGR L V + + LS+++++V
Sbjct: 138 VREYSKYLKLNTMAMFGGVSINPQKKLLRGRVDILVATPGRLLDHVQQRTVNLSNVEFLV 197
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 198 LDEADRMLDMGF 209
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 234 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 293
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + V+ DEADRL E+GF E Q
Sbjct: 294 IIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQ 330
>gi|253997010|ref|YP_003049074.1| DEAD/DEAH box helicase [Methylotenera mobilis JLW8]
gi|253983689|gb|ACT48547.1| DEAD/DEAH box helicase domain protein [Methylotenera mobilis JLW8]
Length = 502
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK GK L ST + GG + + Q ARL DI+VATPGR L + +
Sbjct: 95 LAAQIEESVKTYGKHLPLTSTVIFGGVNANPQIARLKKPLDILVATPGRLLDHANQKNVD 154
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 155 LSGIEILVLDEADRMLDMGF 174
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 257 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 316
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + V+ DEADRL E+GF E Q
Sbjct: 317 IIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQ 353
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q ++++ +FT ++ ++GG S Q A L + PDIVVATPGR + H+ M + L
Sbjct: 222 QVHSMIEKIAQFTDIRCCLVVGGLSTKVQEASLRSMPDIVVATPGRMIDHLRNSMSVDLD 281
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+ ++ DEADRL E+GF+ E
Sbjct: 282 DLAVLILDEADRLLELGFNAE 302
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 234 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 293
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + V+ DEADRL E+GF E Q
Sbjct: 294 IIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQ 330
>gi|372210459|ref|ZP_09498261.1| DEAD/DEAH box helicase [Flavobacteriaceae bacterium S85]
Length = 605
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 5 NINYLISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATP 60
N+ +I P + + ++ KF+K L++ + GG S+++QF +L IVV TP
Sbjct: 71 NVQAIILSPTRELAVQIGDQIQKFSKNIKGLKTVTVYGGASIEDQFRKLKKGAQIVVGTP 130
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GR + ++ +LKL +IQ++V DEAD + MGF
Sbjct: 131 GRTVDLISRRKLKLENIQWLVLDEADEMLNMGF 163
>gi|374373127|ref|ZP_09630787.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
gi|373234100|gb|EHP53893.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
Length = 411
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
GK+ L+ + GG S NQ L D+++ATPGR L ++ + L LS+IQY+V DEA
Sbjct: 97 GKYLSLKHLAVFGGVSQYNQVKALRQKADVLIATPGRLLDLLNQGCLSLSNIQYLVLDEA 156
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 157 DRMLDMGF 164
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +++ K+T+++ + GG + Q LH DI+VATPGR L ++ + ++L +
Sbjct: 89 QISECIEDYSKYTRIRHGVIFGGVNQRPQVDMLHKGIDILVATPGRLLDLMNQGHIRLDN 148
Query: 77 IQYVVFDEADRLFEMGF--DVEQQSP 100
IQY V DEADR+ +MGF D+++ P
Sbjct: 149 IQYFVLDEADRMLDMGFIHDIKRILP 174
>gi|410640695|ref|ZP_11351225.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
gi|410139723|dbj|GAC09412.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
Length = 428
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + +FT + T L GG + Q ++L A DIV++TPGR L + ++
Sbjct: 86 LAEQLASNIANYAQFTDISVTALYGGVKLGGQASKLKAGVDIVISTPGRLLEHMTLKNIE 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+++++VV DEADR+ +MGF DV Q
Sbjct: 146 LANVEFVVLDEADRMLDMGFISDVRQ 171
>gi|148244296|ref|YP_001218990.1| ATP-dependent RNA helicase RhlE [Candidatus Vesicomyosocius
okutanii HA]
gi|146326123|dbj|BAF61266.1| ATP-dependent RNA helicase RhlE [Candidatus Vesicomyosocius
okutanii HA]
Length = 422
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V GK+ L+S+ + GG ++ Q RL + DI+VATPGR L + + +K ++ VV
Sbjct: 93 VTTYGKYLPLKSSVVFGGVKINPQMQRLCSGVDILVATPGRLLDLYSQNSVKFDMLEIVV 152
Query: 82 FDEADRLFEMGF 93
FDEADR+ +MGF
Sbjct: 153 FDEADRMLDMGF 164
>gi|120597828|ref|YP_962402.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120557921|gb|ABM23848.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 438
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 30 KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLF 89
K+Q+ C GG +DNQ L P I+VATPGR L + + + L SI+++V DEADRL
Sbjct: 123 KIQTLC--GGVDIDNQLIELAERPQILVATPGRILDLCKQSHITLDSIKHLVLDEADRLL 180
Query: 90 EMGF--DVEQ 97
EMGF DV++
Sbjct: 181 EMGFWPDVQK 190
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +++ K+T+++ + GG + Q LH DI+VATPGR L ++ + ++L +
Sbjct: 89 QISECIEDYSKYTRIRHGVIFGGVNQRPQVDMLHKGIDILVATPGRLLDLMNQGHIRLDN 148
Query: 77 IQYVVFDEADRLFEMGF--DVEQQSP 100
IQY V DEADR+ +MGF D+++ P
Sbjct: 149 IQYFVLDEADRMLDMGFIHDIKRILP 174
>gi|408489495|ref|YP_006865864.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
gi|408466770|gb|AFU67114.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
Length = 423
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VK+ GKF L+ST + GG + +Q + L D++VATPGR + + + L
Sbjct: 85 LAAQVHQSVKDYGKFVDLRSTVIFGGVNQKSQVSTLRNGVDVLVATPGRLIDLNNQGLLS 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+ ++ +V DEADR+ +MGF
Sbjct: 145 LAKVEILVLDEADRMLDMGF 164
>gi|256272916|gb|EEU07884.1| Prp5p [Saccharomyces cerevisiae JAY291]
Length = 849
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|207347520|gb|EDZ73663.1| YBR237Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 799
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 480 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 535
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 536 LSRCTYVVLDEADRMIDMGFEPDVQ 560
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 482 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 537
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 538 LSRCTYVVLDEADRMIDMGFEPDVQ 562
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 482 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 537
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 538 LSRCTYVVLDEADRMIDMGFEPDVQ 562
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 482 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 537
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 538 LSRCTYVVLDEADRMIDMGFEPDVQ 562
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|363746013|ref|XP_003643496.1| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial
[Gallus gallus]
Length = 394
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 277 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 332
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 333 LSRCTYVVLDEADRMIDMGFEPDVQ 357
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 470 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 525
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 526 LSRCTYVVLDEADRMIDMGFEPDVQ 550
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 483 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 538
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 539 LSRCTYVVLDEADRMIDMGFEPDVQ 563
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|332306838|ref|YP_004434689.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410648227|ref|ZP_11358641.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
gi|332174167|gb|AEE23421.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410132246|dbj|GAC07040.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
Length = 428
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + +FT + T L GG + Q ++L A DIV++TPGR L + ++
Sbjct: 86 LAEQLASNIANYAQFTDISVTALYGGVKLGGQASKLKAGVDIVISTPGRLLEHMTLKNIE 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+++++VV DEADR+ +MGF DV Q
Sbjct: 146 LANVEFVVLDEADRMLDMGFISDVRQ 171
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 462 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 517
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 518 LSRCTYVVLDEADRMIDMGFEPDVQ 542
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 464 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 519
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 520 LSRCTYVVLDEADRMIDMGFEPDVQ 544
>gi|163755613|ref|ZP_02162732.1| DEAD/DEAH box helicase-like protein [Kordia algicida OT-1]
gi|161324526|gb|EDP95856.1| DEAD/DEAH box helicase-like protein [Kordia algicida OT-1]
Length = 438
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + VKE F ++ST + GG + Q A L DI+VATPGR L + + L
Sbjct: 85 LAAQVYANVKEYSTFLDIRSTVIFGGVNARPQIATLRNGVDILVATPGRLLDLHSQKALS 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L+ ++ +V DEADR+ +MGF
Sbjct: 145 LAKVEMLVLDEADRMLDMGF 164
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|148672231|gb|EDL04178.1| mCG18410, isoform CRA_c [Mus musculus]
Length = 466
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 316 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 371
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 372 LSRCTYVVLDEADRMIDMGFEPDVQ 396
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 482 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 537
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 538 LSRCTYVVLDEADRMIDMGFEPDVQ 562
>gi|119578417|gb|EAW58013.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_d [Homo
sapiens]
Length = 618
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 298 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 353
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 354 LSRCTYVVLDEADRMIDMGFEPDVQ 378
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 471 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 526
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 527 LSRCTYVVLDEADRMIDMGFEPDVQ 551
>gi|83719171|ref|YP_441164.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
gi|257140174|ref|ZP_05588436.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
gi|83652996|gb|ABC37059.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 482
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|323310025|gb|EGA63220.1| Prp5p [Saccharomyces cerevisiae FostersO]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|237810939|ref|YP_002895390.1| ATP-dependent RNA helicase RhlE [Burkholderia pseudomallei MSHR346]
gi|237503374|gb|ACQ95692.1| ATP-dependent RNA helicase RhlE [Burkholderia pseudomallei MSHR346]
Length = 488
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|217419732|ref|ZP_03451238.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
576]
gi|217397036|gb|EEC37052.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
576]
Length = 485
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|121599633|ref|YP_993994.1| putative ATP-dependent RNA helicase rhlE [Burkholderia mallei
SAVP1]
gi|121228443|gb|ABM50961.1| putative ATP-dependent RNA helicase rhlE [Burkholderia mallei
SAVP1]
Length = 473
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 76 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 135
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 136 VSSLDILVLDEADRMLDMGF 155
>gi|126440586|ref|YP_001057787.1| ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei 668]
gi|126220079|gb|ABN83585.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
668]
Length = 485
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|76811549|ref|YP_332327.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1710b]
gi|126454229|ref|YP_001065030.1| ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei 1106a]
gi|242316165|ref|ZP_04815181.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
1106b]
gi|254196606|ref|ZP_04903030.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
S13]
gi|254260651|ref|ZP_04951705.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
1710a]
gi|403517400|ref|YP_006651533.1| ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei BPC006]
gi|76581002|gb|ABA50477.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1710b]
gi|126227871|gb|ABN91411.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
1106a]
gi|169653349|gb|EDS86042.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
S13]
gi|242139404|gb|EES25806.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
1106b]
gi|254219340|gb|EET08724.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
1710a]
gi|403073043|gb|AFR14623.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
BPC006]
Length = 485
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|124383654|ref|YP_001028341.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|124291674|gb|ABN00943.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
Length = 488
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|53718338|ref|YP_107324.1| ATP-dependent RNA helicase 1 [Burkholderia pseudomallei K96243]
gi|53724700|ref|YP_102079.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|67641488|ref|ZP_00440266.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei GB8 horse 4]
gi|126450332|ref|YP_001081986.1| ATP-dependent RNA helicase rhlE [Burkholderia mallei NCTC 10247]
gi|134279667|ref|ZP_01766379.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
305]
gi|226196769|ref|ZP_03792349.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
Pakistan 9]
gi|386862863|ref|YP_006275812.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026b]
gi|418392348|ref|ZP_12968130.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354a]
gi|418537531|ref|ZP_13103166.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026a]
gi|418541949|ref|ZP_13107410.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258a]
gi|418548277|ref|ZP_13113396.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258b]
gi|418554393|ref|ZP_13119180.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354e]
gi|52208752|emb|CAH34688.1| putative ATP-dependent RNA helicase 1 [Burkholderia pseudomallei
K96243]
gi|52428123|gb|AAU48716.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|126243202|gb|ABO06295.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10247]
gi|134248867|gb|EBA48949.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
305]
gi|225931300|gb|EEH27307.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
Pakistan 9]
gi|238522432|gb|EEP85876.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei GB8 horse 4]
gi|385349447|gb|EIF56014.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026a]
gi|385356616|gb|EIF62709.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258a]
gi|385358294|gb|EIF64306.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258b]
gi|385370257|gb|EIF75512.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354e]
gi|385375424|gb|EIF80195.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354a]
gi|385659991|gb|AFI67414.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026b]
Length = 485
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|24372719|ref|NP_716761.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24346781|gb|AAN54206.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 447
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 10 ISFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVE 69
++ + + +L L L GG +++ Q A L A P +VVATPGR L + +
Sbjct: 107 LALQVSEALHALASQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQ 166
Query: 70 MELKLSSIQYVVFDEADRLFEMGF 93
+ L +I+++V DEADRL EMGF
Sbjct: 167 SHISLDAIKHLVLDEADRLLEMGF 190
>gi|146294034|ref|YP_001184458.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|145565724|gb|ABP76659.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
Length = 438
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 30 KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLF 89
K+Q+ C GG +DNQ L P I+VATPGR L + + + L SI+++V DEADRL
Sbjct: 123 KIQTLC--GGVDIDNQLIELAERPQILVATPGRILDLCKQSHITLDSIKHLVLDEADRLL 180
Query: 90 EMGF--DVEQ 97
EMGF DV++
Sbjct: 181 EMGFWPDVQK 190
>gi|386314748|ref|YP_006010913.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|319427373|gb|ADV55447.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 432
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 30 KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLF 89
K+Q+ C GG +DNQ L P I+VATPGR L + + + L SI+++V DEADRL
Sbjct: 117 KIQTLC--GGVDIDNQLIELAERPQILVATPGRILDLCKQSHITLDSIKHLVLDEADRLL 174
Query: 90 EMGF--DVEQ 97
EMGF DV++
Sbjct: 175 EMGFWPDVQK 184
>gi|190408613|gb|EDV11878.1| pre-mRNA processing ATP-dependent RNA helicase PRP5 [Saccharomyces
cerevisiae RM11-1a]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|117919411|ref|YP_868603.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611743|gb|ABK47197.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 443
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF-- 93
L GG + + Q L A P ++VATPGR L + + + L SI+Y+V DEADRL EMGF
Sbjct: 128 LCGGIAQEEQLVELTAKPQLIVATPGRLLDLCTQSHISLDSIKYLVLDEADRLLEMGFWP 187
Query: 94 DVEQ 97
DV++
Sbjct: 188 DVQK 191
>gi|415909527|ref|ZP_11553150.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
gi|407762572|gb|EKF71396.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
Length = 493
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 27 KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEAD 86
+FT L+ST + GG M Q A L A +IV+ATPGR L V + + LS Q +V DEAD
Sbjct: 117 RFTPLRSTVVFGGVDMSPQTAILRAGVEIVIATPGRLLDHVQQKTVNLSQTQILVMDEAD 176
Query: 87 RLFEMGF 93
R+ +MGF
Sbjct: 177 RMLDMGF 183
>gi|290878256|emb|CBK39315.1| Prp5p [Saccharomyces cerevisiae EC1118]
gi|323338744|gb|EGA79960.1| Prp5p [Saccharomyces cerevisiae Vin13]
gi|365766935|gb|EHN08424.1| Prp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301086|gb|EIW12175.1| Prp5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|192362464|ref|YP_001982184.1| Superfamily II DNA and RNA helicase [Cellvibrio japonicus Ueda107]
gi|190688629|gb|ACE86307.1| Superfamily II DNA and RNA helicase [Cellvibrio japonicus Ueda107]
Length = 474
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q V+ GK+ +L+S + GG S++ Q L DI+VATPGR L +V + +
Sbjct: 89 LAAQVHDSVRTYGKYLRLRSAVVFGGVSINPQMMTLRGGVDILVATPGRLLDLVNQNAVY 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L ++ +V DEADR+ +MGF
Sbjct: 149 LQDVEILVLDEADRMLDMGF 168
>gi|392307510|ref|ZP_10270044.1| ATP-dependent RNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 435
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + +E + T+L++ L GG + Q +L A DIVVATPGR L + +
Sbjct: 86 LAEQIGRNCEEFAQHTELKTVSLFGGVNTTGQADKLAAGADIVVATPGRLLDHIRLGNIS 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+++Q++V DEADR+ +MGF D++Q
Sbjct: 146 LANVQHLVLDEADRMLDMGFITDIQQ 171
>gi|160419164|sp|A6ZLH6.1|PRP5_YEAS7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|151946623|gb|EDN64845.1| RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|398833553|ref|ZP_10591682.1| DNA/RNA helicase, superfamily II, partial [Herbaspirillum sp.
YR522]
gi|398221415|gb|EJN07832.1| DNA/RNA helicase, superfamily II, partial [Herbaspirillum sp.
YR522]
Length = 467
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L S C+ GG ++ Q A L DI+VATPGR L + + +
Sbjct: 88 LAAQVEESVRLYGKYLQLSSACIFGGVGINPQIALLKRGVDILVATPGRLLDHMQQGTVN 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +Q +V DEADR+ +MGF
Sbjct: 148 LQHVQILVLDEADRMLDMGF 167
>gi|195481067|ref|XP_002101501.1| GE15594 [Drosophila yakuba]
gi|194189025|gb|EDX02609.1| GE15594 [Drosophila yakuba]
Length = 970
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 405 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 464
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 465 FKLTKLQFLILDEADRLLELGYERDVKQ 492
>gi|430761663|ref|YP_007217520.1| ATP-dependent RNA helicase RhlE [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430011287|gb|AGA34039.1| ATP-dependent RNA helicase RhlE [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 506
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V + G++ K++S + GG +++ Q L DIVVATPGR L V + L LS I+ +V
Sbjct: 160 VTDYGRYLKMRSMVVFGGVNINPQIKALRGPMDIVVATPGRLLDHVGQKTLDLSGIEILV 219
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 220 LDEADRMLDMGF 231
>gi|349576612|dbj|GAA21783.1| K7_Prp5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|171317466|ref|ZP_02906657.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
gi|171097362|gb|EDT42206.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
Length = 480
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|170698992|ref|ZP_02890050.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170136099|gb|EDT04369.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 472
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|172061636|ref|YP_001809288.1| DEAD/DEAH box helicase [Burkholderia ambifaria MC40-6]
gi|171994153|gb|ACB65072.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MC40-6]
Length = 479
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|115352774|ref|YP_774613.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282762|gb|ABI88279.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria AMMD]
Length = 480
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|6319714|ref|NP_009796.1| DEAD-box RNA helicase PRP5 [Saccharomyces cerevisiae S288c]
gi|130806|sp|P21372.1|PRP5_YEAST RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|172284|gb|AAA34914.1| PRP5 [Saccharomyces cerevisiae]
gi|536641|emb|CAA85200.1| PRP5 [Saccharomyces cerevisiae]
gi|51013085|gb|AAT92836.1| YBR237W [Saccharomyces cerevisiae]
gi|285810568|tpg|DAA07353.1| TPA: DEAD-box RNA helicase PRP5 [Saccharomyces cerevisiae S288c]
Length = 849
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>gi|395767239|ref|ZP_10447774.1| hypothetical protein MCS_00707 [Bartonella doshiae NCTC 12862]
gi|395414552|gb|EJF80994.1| hypothetical protein MCS_00707 [Bartonella doshiae NCTC 12862]
Length = 470
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 15 VQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKL 74
+++T +F K T L + + GG S Q R+ A DI+VATPGR + +V E + L
Sbjct: 106 IEETMRF---FAKGTHLSTCLIFGGVSRLKQIKRMEAGVDILVATPGRLMDLVREKYVDL 162
Query: 75 SSIQYVVFDEADRLFEMGF--DVEQ 97
S +++V DEADR+ +MGF DV Q
Sbjct: 163 SQTRFLVLDEADRMLDMGFIHDVRQ 187
>gi|440781688|ref|ZP_20959916.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
pasteurianum DSM 525]
gi|440220406|gb|ELP59613.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
pasteurianum DSM 525]
Length = 522
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++ ++ L K+ K++S + GG SMD Q + + I+V TPGR L + LKL++
Sbjct: 87 QIYEELRRLSKYDKVRSLPVYGGQSMDRQISSIKKDVSIIVGTPGRVLDHIRRKTLKLNN 146
Query: 77 IQYVVFDEADRLFEMGF--DVEQ 97
+ Y+V DEAD + MGF D+E+
Sbjct: 147 LNYLVLDEADEMLNMGFIDDIEE 169
>gi|406678359|ref|ZP_11085535.1| hypothetical protein HMPREF1170_03743 [Aeromonas veronii AMC35]
gi|404622440|gb|EKB19303.1| hypothetical protein HMPREF1170_03743 [Aeromonas veronii AMC35]
Length = 415
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + V G+ T L ST + GG S+ Q L A DI++ATPGR L + + L L S
Sbjct: 91 QVAESVARYGQSTGLTSTLVYGGVSIAAQVEALQAGVDILIATPGRLLDHLRQGALSLDS 150
Query: 77 IQYVVFDEADRLFEMGFDVE-----QQSPCD 102
++++VFDEADR+ +MGF E +Q P D
Sbjct: 151 LRHLVFDEADRMLDMGFMDEIKALLKQIPAD 181
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
+ LI P + Q F+ VK K+T ++S + GG + +Q + L A +I++ATPGR
Sbjct: 92 VRALILVPTRELADQVFEDVKRYAKYTPVKSAVVFGGVDISSQTSILRAGVEILIATPGR 151
Query: 63 FLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L V + + LS Q +V DEADR+ +MGF
Sbjct: 152 LLDHVQQKNVNLSHTQILVLDEADRMLDMGF 182
>gi|127511883|ref|YP_001093080.1| DEAD/DEAH box helicase [Shewanella loihica PV-4]
gi|126637178|gb|ABO22821.1| DEAD/DEAH box helicase domain protein [Shewanella loihica PV-4]
Length = 432
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
+N LI P +V Q +K+ ++ + + GG MD Q A++ DI+VATP
Sbjct: 73 SNTRALILAPTRELVAQVADNIKQYSRYLPISVLTVYGGVKMDTQAAKVKKGADIIVATP 132
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
GR L + L LS++ ++V DEADR+ +MGF + Q
Sbjct: 133 GRLLEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQ 170
>gi|71279831|ref|YP_267868.1| DEAD-box ATP dependent DNA helicase [Colwellia psychrerythraea 34H]
gi|71145571|gb|AAZ26044.1| ATP-dependent RNA helicase, DEAD box family [Colwellia
psychrerythraea 34H]
Length = 466
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
N+ LI P + Q + ++ GK+ L S + GG ++ Q ARL D++VATPG
Sbjct: 80 NVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARLRQGVDVLVATPG 139
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L + + +K S ++ + DEADR+ +MGF
Sbjct: 140 RLLDLYNQRAVKFSQLEVFILDEADRMLDMGF 171
>gi|358635486|dbj|BAL22783.1| ATP-dependent RNA helicase [Azoarcus sp. KH32C]
Length = 521
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 14 IVQQTFKFVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ K VK G+ + L + CL+GG Q +L D+VVATPGR + + ++
Sbjct: 89 LAQQVEKAVKTYGRHLRWLNTACLVGGAPFFAQVKQLSRPVDVVVATPGRLIDHLTRRKI 148
Query: 73 KLSSIQYVVFDEADRLFEMGF--DVE 96
KLS ++ ++ DEADR+ +MGF D+E
Sbjct: 149 KLSDVEVLILDEADRMLDMGFVEDIE 174
>gi|334131082|ref|ZP_08504848.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
gi|333443712|gb|EGK71673.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
Length = 535
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ G+ K++S + GG M+ Q L DI+VATPGR L V E L
Sbjct: 90 LAAQVEESVRTYGRHAKMRSMVMFGGVGMNPQLQALKQRVDILVATPGRLLDHVGEKSLD 149
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ V DEADR+ +MGF
Sbjct: 150 LSGVEIFVLDEADRMLDMGF 169
>gi|194751055|ref|XP_001957842.1| GF23818 [Drosophila ananassae]
gi|190625124|gb|EDV40648.1| GF23818 [Drosophila ananassae]
Length = 795
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +IVVATPGR + +V L
Sbjct: 353 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKMKATNLKR 412
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F MGF+ + +S C+
Sbjct: 413 VTFLVLDEADRMFHMGFEPQVRSICN 438
>gi|18859659|ref|NP_573214.1| CG8611, isoform A [Drosophila melanogaster]
gi|5052508|gb|AAD38584.1|AF145609_1 BcDNA.GH02833 [Drosophila melanogaster]
gi|22832445|gb|AAF48727.2| CG8611, isoform A [Drosophila melanogaster]
Length = 974
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 413 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 472
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 473 FKLTKLQFLILDEADRLLELGYERDVKQ 500
>gi|302318882|ref|NP_001032894.2| ATP-dependent RNA helicase DDX42 [Danio rerio]
Length = 908
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 340 LCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 399
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + ++VFDEADR+F+MGF+ + +S
Sbjct: 400 LQRVTFLVFDEADRMFDMGFEYQVRS 425
>gi|167617991|ref|ZP_02386622.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis Bt4]
Length = 435
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|146283021|ref|YP_001173174.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri A1501]
gi|145571226|gb|ABP80332.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri A1501]
Length = 455
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 83 DVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 142
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
R + + L L ++ +V DEADR+ +MGF + Q
Sbjct: 143 RLIEHLNAGSLILKDVEILVIDEADRMLDMGFAEDMQ 179
>gi|90408880|ref|ZP_01217019.1| putative ATP-dependent RNA helicase [Psychromonas sp. CNPT3]
gi|90310019|gb|EAS38165.1| putative ATP-dependent RNA helicase [Psychromonas sp. CNPT3]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + Q K ++E +F + + GG +MD Q L DI+VATPG
Sbjct: 83 SVRALILSPTRELAMQITKNIQEYAQFMDITCGLVCGGKNMDTQVKLLKGGVDILVATPG 142
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQSPCDT 103
R + + + LS +++VV DEADR+ +MGF QS +T
Sbjct: 143 RLIEHINARSVDLSHVKHVVLDEADRMLDMGFLTAIQSLIET 184
>gi|28571338|ref|NP_788922.1| CG8611, isoform B [Drosophila melanogaster]
gi|74860578|sp|Q86B47.1|Y8611_DROME RecName: Full=Probable ATP-dependent RNA helicase CG8611
gi|28381641|gb|AAO41693.1| CG8611, isoform B [Drosophila melanogaster]
Length = 975
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 414 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 473
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 474 FKLTKLQFLILDEADRLLELGYERDVKQ 501
>gi|365848675|ref|ZP_09389147.1| ATP-dependent RNA helicase RhlE [Yokenella regensburgei ATCC 43003]
gi|364570255|gb|EHM47873.1| ATP-dependent RNA helicase RhlE [Yokenella regensburgei ATCC 43003]
Length = 450
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V++ K+ ++S + GG S++ Q +L D++VATPGR L + + LKL SI+ +V
Sbjct: 95 VRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNALKLDSIEVLV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|294141997|ref|YP_003557975.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328466|dbj|BAJ03197.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 430
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + + G+FT L++ + GG +M+ Q L+A DI+VATPGR V + L LS
Sbjct: 87 QVAENITRYGQFTSLKTLAVYGGANMNPQRKALNAGVDILVATPGRLFDFVGQHGLNLSE 146
Query: 77 IQYVVFDEADRLFEMGF--DVEQ 97
+ ++ DEADR+ +MGF D+E+
Sbjct: 147 VTSLIIDEADRMLDMGFVRDIEK 169
>gi|260800277|ref|XP_002595060.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
gi|229280302|gb|EEN51071.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
Length = 875
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + K GK L GG SM Q L +IVV TPGR + +V +
Sbjct: 321 LSQQIYAEAKRFGKCYGLSVVAAYGGGSMWEQTKALQLGAEIVVCTPGRLIDLVKKKATN 380
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 381 LQRVTYLVFDEADRMFDMGFEPQVRS 406
>gi|377819861|ref|YP_004976232.1| DEAD/DEAH box helicase [Burkholderia sp. YI23]
gi|357934696|gb|AET88255.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. YI23]
Length = 528
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 92 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALRRGVDIVVATPGRLLDHMQQKTID 151
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+S ++ +V DEADR+ +MGF
Sbjct: 152 VSQLEILVLDEADRMLDMGF 171
>gi|320162646|gb|EFW39545.1| ATP-dependent RNA helicase DRS1 [Capsaspora owczarzaki ATCC 30864]
Length = 924
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLSSIQYVV 81
++L KFT ++ + + GG S Q A L A PD++VATPGR + H+ L I+ ++
Sbjct: 434 EKLAKFTDIRMSLICGGFSTKRQQAELRAHPDVIVATPGRLIDHLQNSPGFDLEGIEVLI 493
Query: 82 FDEADRLFEMGFDVE 96
DEADRL EMGF E
Sbjct: 494 MDEADRLLEMGFKEE 508
>gi|167892936|ref|ZP_02480338.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
7894]
Length = 416
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|167844421|ref|ZP_02469929.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
B7210]
Length = 427
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|323301250|gb|ADX35967.1| LD47310p [Drosophila melanogaster]
Length = 990
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 429 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 488
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 489 FKLTKLQFLILDEADRLLELGYERDVKQ 516
>gi|167903972|ref|ZP_02491177.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
NCTC 13177]
Length = 430
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|167561646|ref|ZP_02354562.1| putative ATP-dependent RNA helicase rhlE [Burkholderia oklahomensis
EO147]
Length = 395
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|113954719|ref|YP_730508.1| DNA and RNA helicase [Synechococcus sp. CC9311]
gi|113882070|gb|ABI47028.1| DNA and RNA helicase [Synechococcus sp. CC9311]
Length = 426
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q V+E K+ +L S + GG ++ Q RL D++VATPGR L ++ + ++
Sbjct: 99 LAAQVLASVREYSKYLQLTSDVVFGGVKINPQIQRLQKGVDVLVATPGRLLDLLQQGAVR 158
Query: 74 LSSIQYVVFDEADRLFEMGF 93
++++V DEADR+ +MGF
Sbjct: 159 FDRVEFLVLDEADRMLDMGF 178
>gi|431926773|ref|YP_007239807.1| DNA/RNA helicase [Pseudomonas stutzeri RCH2]
gi|431825060|gb|AGA86177.1| DNA/RNA helicase, superfamily II [Pseudomonas stutzeri RCH2]
Length = 443
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAVLRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ ++ DEADR+ +MGF DV++
Sbjct: 131 RMIEHLNAGTLILKDVEMLILDEADRMLDMGFAEDVQR 168
>gi|337750837|ref|YP_004644999.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336302026|gb|AEI45129.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
Length = 433
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + V+EL K T L+ L+GG S+D Q +L P IVV TPGR +V +LKL
Sbjct: 88 QIVQTVEELTKGTGLRVQQLIGGASIDRQIEKLRTKPQIVVGTPGRVQELVKLRKLKLHG 147
Query: 77 IQYVVFDEADRLFEMGF--DVE 96
I+ VV DE D++FE+G DVE
Sbjct: 148 IKTVVVDEVDQVFELGSMQDVE 169
>gi|167909652|ref|ZP_02496743.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
112]
Length = 419
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|167737241|ref|ZP_02410015.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
14]
gi|167822848|ref|ZP_02454319.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
9]
Length = 414
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|410612255|ref|ZP_11323335.1| ATP-dependent RNA helicase RhlE [Glaciecola psychrophila 170]
gi|410168256|dbj|GAC37224.1| ATP-dependent RNA helicase RhlE [Glaciecola psychrophila 170]
Length = 410
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ +K + T+L+ GG S++ Q + L DI++ATPGR L ++ + +
Sbjct: 84 LAQQVYKNFVGYAENTQLKVAVAYGGVSINPQISALERGVDILIATPGRLLDLIAKGNVD 143
Query: 74 LSSIQYVVFDEADRLFEMGFDVE 96
LS +Q +VFDEADR+ +MGF E
Sbjct: 144 LSQLQTIVFDEADRMLDMGFKDE 166
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 465 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLDNRYLV 520
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 521 LSRCTYVVLDEADRMIDMGFEPDVQ 545
>gi|315499759|ref|YP_004088562.1| dead/deah box helicase domain protein [Asticcacaulis excentricus CB
48]
gi|315417771|gb|ADU14411.1| DEAD/DEAH box helicase domain protein [Asticcacaulis excentricus CB
48]
Length = 501
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + ++ K+ KL L+GG SM +Q A+L D+++ATPGR L + ++
Sbjct: 85 LADQVAEAFEKYAKYCKLNWALLIGGVSMADQVAKLDKGVDVLIATPGRLLDLFERSKVM 144
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+ +Q +V DEADR+ +MGF D+E+
Sbjct: 145 LNGVQLMVVDEADRMLDMGFIPDIER 170
>gi|384249200|gb|EIE22682.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q + L +FT ++ ++GG S+ Q A L SP++VVATPGR + H+ + L
Sbjct: 203 QVHSMITNLAQFTDIRIALVVGGLSLQVQSATLRTSPEVVVATPGRLIDHLRNTQSVGLE 262
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+Q +V DEADRL +MGF E
Sbjct: 263 DLQALVLDEADRLLQMGFSEE 283
>gi|152996051|ref|YP_001340886.1| DEAD/DEAH box helicase [Marinomonas sp. MWYL1]
gi|150836975|gb|ABR70951.1| DEAD/DEAH box helicase domain protein [Marinomonas sp. MWYL1]
Length = 417
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 11 SFPIVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM 70
S + +Q F V++L K T++QS ++GG Q +L DI+VATPGR + + +
Sbjct: 98 SRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLSEPCDILVATPGRLVELDEKQ 157
Query: 71 ELKLSSIQYVVFDEADRLFEMGF 93
L L+ + Y V DEADR+ +MGF
Sbjct: 158 WLDLTDVSYFVIDEADRMLDMGF 180
>gi|154249323|ref|YP_001410148.1| DEAD/DEAH box helicase domain-containing protein [Fervidobacterium
nodosum Rt17-B1]
gi|154153259|gb|ABS60491.1| DEAD/DEAH box helicase domain protein [Fervidobacterium nodosum
Rt17-B1]
Length = 571
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q F+ +K L +++ T L GG S++ QF L DIVV TPGR + + L LS
Sbjct: 103 QIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSH 162
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+V DEADR+ +MGF
Sbjct: 163 VEYLVLDEADRMLDMGF 179
>gi|344199440|ref|YP_004783766.1| DEAD/DEAH box helicase domain-containing protein [Acidithiobacillus
ferrivorans SS3]
gi|343774884|gb|AEM47440.1| DEAD/DEAH box helicase domain protein [Acidithiobacillus
ferrivorans SS3]
Length = 419
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G +++ LI P + Q + V+ G++ L+S L+GG ++ Q +L S D++VA
Sbjct: 74 GPSSVRALILVPTRELAAQVEESVQLYGRYLSLRSLVLIGGVKINPQMQKLRRSVDVLVA 133
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + + LS ++ +V DEADR+ +MGF
Sbjct: 134 TPGRLLDHIQQRSVDLSRVEILVLDEADRMLDMGF 168
>gi|167718208|ref|ZP_02401444.1| putative ATP-dependent RNA helicase rhlE [Burkholderia pseudomallei
DM98]
Length = 434
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|15222526|ref|NP_174479.1| DEAD-box ATP-dependent RNA helicase 5 [Arabidopsis thaliana]
gi|75333350|sp|Q9C551.1|RH5_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 5
gi|12321302|gb|AAG50723.1|AC079041_16 p68 RNA helicase, putative [Arabidopsis thaliana]
gi|12321459|gb|AAG50784.1|AC074309_1 RNA helicase, putative [Arabidopsis thaliana]
gi|19347812|gb|AAL86356.1| putative p68 RNA helicase [Arabidopsis thaliana]
gi|21436171|gb|AAM51373.1| putative p68 RNA helicase [Arabidopsis thaliana]
gi|332193302|gb|AEE31423.1| DEAD-box ATP-dependent RNA helicase 5 [Arabidopsis thaliana]
Length = 537
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++E G+ L+S C+ GG S Q + + + DIV+ TPGR ++ L+LS
Sbjct: 206 QISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSD 265
Query: 77 IQYVVFDEADRLFEMGFD 94
+ +VV DEADR+ +MGF+
Sbjct: 266 VSFVVLDEADRMLDMGFE 283
>gi|406835858|ref|ZP_11095452.1| DEAD/DEAH box helicase [Schlesneria paludicola DSM 18645]
Length = 583
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 14 IVQQTFKFVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ Q + + +L F K ++ + GG S D+QF L A P IV+ TPGR + + + L
Sbjct: 84 LASQVAEEIAKLAAFKKGVRELPIFGGQSYDHQFRGLKAGPQIVIGTPGRLIDHIKQGTL 143
Query: 73 KLSSIQYVVFDEADRLFEMGF--DVE 96
KL+ ++ VV DEADR+ +MGF D+E
Sbjct: 144 KLNEVKMVVLDEADRMLDMGFREDIE 169
>gi|222110403|ref|YP_002552667.1| dead/deah box helicase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221729847|gb|ACM32667.1| DEAD/DEAH box helicase domain protein [Acidovorax ebreus TPSY]
Length = 578
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L ST + GG M+ Q R+ D++VATPGR L + + +
Sbjct: 89 LAAQVEESVRGYGKYLDLNSTVIFGGVGMNPQIERIKRGVDVLVATPGRLLDLQQQGFMD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ +V DEADR+ +MGF
Sbjct: 149 LSTVEILVLDEADRMLDMGF 168
>gi|171059329|ref|YP_001791678.1| DEAD/DEAH box helicase [Leptothrix cholodnii SP-6]
gi|170776774|gb|ACB34913.1| DEAD/DEAH box helicase domain protein [Leptothrix cholodnii SP-6]
Length = 479
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + Q + V+ GK+ +L S + GG M Q RL DI+VA
Sbjct: 74 GRPAIRALILTPTRELAAQVEESVRTYGKYLQLTSMVIFGGVGMGPQVDRLRKGVDILVA 133
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + LS +Q+ V DEADR+ +MGF
Sbjct: 134 TPGRLLDHHQQGTIDLSQVQFFVLDEADRMLDMGF 168
>gi|167568882|ref|ZP_02361756.1| ATP-dependent RNA helicase RhlE [Burkholderia oklahomensis C6786]
Length = 408
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+SS+ +V DEADR+ +MGF
Sbjct: 148 VSSLDILVLDEADRMLDMGF 167
>gi|149239594|ref|XP_001525673.1| hypothetical protein LELG_03601 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451166|gb|EDK45422.1| hypothetical protein LELG_03601 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 461
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +++L + T + + GG S D+Q ++ ++VVATPGR + ++ + + LSS
Sbjct: 210 QIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSS 269
Query: 77 IQYVVFDEADRLFEMGFD 94
I Y+V DEADR+ E GF+
Sbjct: 270 INYLVLDEADRMLEKGFE 287
>gi|121594947|ref|YP_986843.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
JS42]
gi|120607027|gb|ABM42767.1| DEAD/DEAH box helicase domain protein [Acidovorax sp. JS42]
Length = 577
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L ST + GG M+ Q R+ D++VATPGR L + + +
Sbjct: 89 LAAQVEESVRGYGKYLDLNSTVIFGGVGMNPQIERIKRGVDVLVATPGRLLDLQQQGFMD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ +V DEADR+ +MGF
Sbjct: 149 LSTVEILVLDEADRMLDMGF 168
>gi|424742777|ref|ZP_18171098.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
gi|422944007|gb|EKU39017.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
Length = 389
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L+ PI +Q F+ K L KFT L LLGG D Q
Sbjct: 68 INDLLHNPIQEQRFRGEPRALILAPTRELALQIESDAKLLTKFTDLHVVTLLGGVDFDKQ 127
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
+L A+ DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 128 KKQLDANFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 176
>gi|406040161|ref|ZP_11047516.1| ATP-dependent RNA helicase RhlB [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 383
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ PI +Q ++ KEL KFT L+ L+GG D Q
Sbjct: 62 INDLLNNPIQEQRYRGEPRALILAPTRELALQIESDAKELTKFTDLKLLTLVGGVDFDKQ 121
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
L+A+ DI+VATPGR + + + E+ L I+++V DEADRL +MGF
Sbjct: 122 KKPLNANFLDILVATPGRLIDFIEQKEIWLDQIEFLVIDEADRLLDMGF 170
>gi|358395117|gb|EHK44510.1| hypothetical protein TRIATDRAFT_300672 [Trichoderma atroviride IMI
206040]
Length = 498
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT++ + + +L+ CL GG S D+Q A L DI+VATPGR + + +
Sbjct: 159 LAMQTYEQMNGVAALLRLKCVCLYGGASKDDQRALLQRGADIIVATPGRLKDFMSDGTVD 218
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
LS Q+ V DEADR+ + GF+
Sbjct: 219 LSGCQFAVLDEADRMLDKGFE 239
>gi|296083374|emb|CBI23263.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + E GK ++S CL GG S Q + L + DIV+ TPGR ++
Sbjct: 295 LAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCC 354
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L+ + +VV DEADR+ +MGF+ E +S
Sbjct: 355 LTEVSFVVLDEADRMLDMGFEPEVRS 380
>gi|357403745|ref|YP_004915669.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
gi|351716410|emb|CCE22070.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
Length = 454
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V GK+ L+S + GG S++ Q A+L DI++ATPGR L + + +
Sbjct: 86 LAAQVGESVDTYGKYLPLKSAVVFGGLSINPQIAQLRRGVDILIATPGRLLDHIAQKTVD 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 146 LSQLEILVLDEADRMLDMGF 165
>gi|313675971|ref|YP_004053967.1| dead/deah box helicase domain protein [Marivirga tractuosa DSM
4126]
gi|312942669|gb|ADR21859.1| DEAD/DEAH box helicase domain protein [Marivirga tractuosa DSM
4126]
Length = 439
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q ++ + ELGK+T L++ CL GG Q + DI+VATPGR L I L+
Sbjct: 87 LVMQVYENILELGKYTDLRTVCLYGGIGPKKQAQEVAEGCDIIVATPGRLLDIYSAGVLQ 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
I+ + DEADR+ +MGF
Sbjct: 147 PKQIKTFILDEADRMMDMGF 166
>gi|91775307|ref|YP_545063.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91775451|ref|YP_545207.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91709294|gb|ABE49222.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91709438|gb|ABE49366.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|167042456|gb|ABZ07182.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 515
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK KL S + GG ++ Q RL DI+VATPGR L + +
Sbjct: 97 LAAQVEESVQTYGKHLKLTSMVMFGGVGINPQIERLKKPLDILVATPGRLLDHAAQKTID 156
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+I+ +V DEADR+ +MGF
Sbjct: 157 LSAIEILVLDEADRMLDMGF 176
>gi|421616760|ref|ZP_16057762.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|421617248|ref|ZP_16058242.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|409780746|gb|EKN60363.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|409781241|gb|EKN60843.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
Length = 443
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
R + + L L ++ ++ DEADR+ +MGF + Q
Sbjct: 131 RLIEHLNAGSLILKDVEILIIDEADRMLDMGFAEDMQ 167
>gi|86142428|ref|ZP_01060938.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85831180|gb|EAQ49637.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 442
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VKE K+T +QST + GG +Q + D++ ATPGR L +V + + L +I+Y+V
Sbjct: 95 VKEYSKYTGIQSTVIFGGVKQASQVQAMRKGVDVLTATPGRLLDLVKQGFIDLGTIEYLV 154
Query: 82 FDEADRLFEMGF 93
DEAD++ +MGF
Sbjct: 155 LDEADQMLDMGF 166
>gi|291614807|ref|YP_003524964.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291584919|gb|ADE12577.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 466
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I L+ P + Q + V+ GK+ L+S + GG +++ Q +LH DI+VATP
Sbjct: 94 APIRALVLTPTRELAAQVEESVRLYGKYLPLKSMMMFGGVNINPQIKQLHGRVDILVATP 153
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GR L + + + LS ++ +V DEADR+ +MGF
Sbjct: 154 GRLLDHLQQKTVDLSHVEILVLDEADRMLDMGF 186
>gi|380696525|ref|ZP_09861384.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 374
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + + + K+T+++ + GG + Q LH DI+VATPGR L ++ + ++L +
Sbjct: 89 QISECIDDYSKYTRIRHGVIFGGVNQRPQVDMLHKGIDILVATPGRLLDLMNQGHIRLDN 148
Query: 77 IQYVVFDEADRLFEMGF--DVEQQSP 100
IQY V DEADR+ +MGF D+++ P
Sbjct: 149 IQYFVLDEADRMLDMGFIHDIKRILP 174
>gi|195567407|ref|XP_002107252.1| GD17360 [Drosophila simulans]
gi|194204657|gb|EDX18233.1| GD17360 [Drosophila simulans]
Length = 841
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 280 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 339
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 340 FKLTKLQFLILDEADRLLELGYERDVKQ 367
>gi|3775989|emb|CAA09197.1| RNA helicase [Arabidopsis thaliana]
Length = 411
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++E G+ L+S C+ GG S Q + + + DIV+ TPGR ++ L+LS
Sbjct: 80 QISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSD 139
Query: 77 IQYVVFDEADRLFEMGFD 94
+ +VV DEADR+ +MGF+
Sbjct: 140 VSFVVLDEADRMLDMGFE 157
>gi|413963566|ref|ZP_11402793.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
gi|413929398|gb|EKS68686.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
Length = 502
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ KL+ST + GG ++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYGKYLKLKSTVMFGGVGINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+S ++ +V DEADR+ +MGF
Sbjct: 148 VSQLEILVLDEADRMLDMGF 167
>gi|365761953|gb|EHN03573.1| Prp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 706
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFT----KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT ++S C GG M Q L +IVVATPGRF+
Sbjct: 332 LILAPTRELALQIHEEVTKFTGTDASIRSVCCTGGSEMKKQITDLKRGAEIVVATPGRFI 391
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +V+ DEADRLF++GF+
Sbjct: 392 DILTLNDGKLLSTKRITFVIMDEADRLFDLGFE 424
>gi|134296873|ref|YP_001120608.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|387903185|ref|YP_006333524.1| ATP-dependent RNA helicase RhlE [Burkholderia sp. KJ006]
gi|134140030|gb|ABO55773.1| DEAD/DEAH box helicase domain protein [Burkholderia vietnamiensis
G4]
gi|387578077|gb|AFJ86793.1| ATP-dependent RNA helicase RhlE [Burkholderia sp. KJ006]
Length = 486
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|401838933|gb|EJT42341.1| PRP5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 659
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFT----KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT ++S C GG M Q L +IVVATPGRF+
Sbjct: 332 LILAPTRELALQIHEEVTKFTGTDASIRSVCCTGGSEMKKQITDLKRGAEIVVATPGRFI 391
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +V+ DEADRLF++GF+
Sbjct: 392 DILTLNDGKLLSTKRITFVIMDEADRLFDLGFE 424
>gi|397686167|ref|YP_006523486.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 10701]
gi|395807723|gb|AFN77128.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 10701]
Length = 448
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PDI++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAILRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ ++ DEADR+ +MGF DV++
Sbjct: 131 RMIEHLNAGTLILKDVELLILDEADRMLDMGFADDVQR 168
>gi|262376303|ref|ZP_06069533.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
gi|262308904|gb|EEY90037.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
Length = 383
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASP-DIVVATPGRFLHIVVEMELKLSSIQYV 80
++L K+ L LLGG D Q +L+ +P DI+VATPGR + V + E+ L I+++
Sbjct: 98 AQDLAKYAGLNVVTLLGGVDFDKQKNQLNKAPVDIMVATPGRLIDFVEQKEVWLDQIEFL 157
Query: 81 VFDEADRLFEMGF 93
V DEADRL +MGF
Sbjct: 158 VIDEADRLLDMGF 170
>gi|429216159|ref|ZP_19207318.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
gi|428153812|gb|EKX00366.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
Length = 441
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 9 LISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + QQT K V+ +FT +++ + GG+ Q ARL +P+I++ TPGR
Sbjct: 75 LILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLNE 134
Query: 66 IVVEMELKLSSIQYVVFDEADRLFEMGF 93
L L ++ +V DEADR+ +MGF
Sbjct: 135 QFNAGNLPLGDVEVLVLDEADRMLDMGF 162
>gi|339324706|ref|YP_004684399.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
gi|338164863|gb|AEI75918.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
Length = 532
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+S + GG ++ Q +L +IVVATPGR L V + +
Sbjct: 93 LAAQVEESVRNYGKYLRLRSMVMFGGVGINPQIEQLKRGVEIVVATPGRLLDHVSQRTID 152
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 153 LSQVELLVLDEADRMLDMGF 172
>gi|238753347|ref|ZP_04614710.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
gi|238708300|gb|EEQ00655.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
Length = 453
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V++ K+ KL+S + GG S++ Q +L DI+VATPGR L + + + LS I+ +V
Sbjct: 95 VEQYSKYLKLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNAVDLSKIEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|188591276|ref|YP_001795876.1| ATP-dependent RNA helicase hydrolase [Cupriavidus taiwanensis LMG
19424]
gi|170938170|emb|CAP63156.1| ATP-dependent RNA helicase hydrolase [Cupriavidus taiwanensis LMG
19424]
Length = 516
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+S + GG ++ Q +L +IVVATPGR L V + +
Sbjct: 93 LAAQVEESVRNYGKYLRLRSMVMFGGVGINPQIEQLKRGVEIVVATPGRLLDHVSQRTID 152
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 153 LSQVELLVLDEADRMLDMGF 172
>gi|113866560|ref|YP_725049.1| ATP-dependent RNA helicase [Ralstonia eutropha H16]
gi|113525336|emb|CAJ91681.1| ATP-dependent RNA helicase [Ralstonia eutropha H16]
Length = 520
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+S + GG ++ Q +L +IVVATPGR L V + +
Sbjct: 93 LAAQVEESVRNYGKYLRLRSMVMFGGVGINPQIEQLKRGVEIVVATPGRLLDHVSQRTID 152
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 153 LSQVELLVLDEADRMLDMGF 172
>gi|449663558|ref|XP_002166443.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Hydra
magnipapillata]
Length = 632
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K+LG +++ ++GG S ++Q +L +IV+ATPGR + ++ L
Sbjct: 297 IEEETIKFAKKLG----IRTVAVIGGLSREDQGFQLRLGCEIVIATPGRLIDVLENRYLV 352
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 353 LSQCSYVVMDEADRMIDMGFEPDVQ 377
>gi|152013480|sp|A5E1W4.2|DBP3_LODEL RecName: Full=ATP-dependent RNA helicase DBP3
Length = 535
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +++L + T + + GG S D+Q ++ ++VVATPGR + ++ + + LSS
Sbjct: 210 QIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSS 269
Query: 77 IQYVVFDEADRLFEMGFD 94
I Y+V DEADR+ E GF+
Sbjct: 270 INYLVLDEADRMLEKGFE 287
>gi|78067467|ref|YP_370236.1| DEAD/DEAH box helicase [Burkholderia sp. 383]
gi|77968212|gb|ABB09592.1| DEAD/DEAH box helicase [Burkholderia sp. 383]
Length = 484
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|402565565|ref|YP_006614910.1| DEAD/DEAH box helicase [Burkholderia cepacia GG4]
gi|402246762|gb|AFQ47216.1| DEAD/DEAH box helicase domain protein [Burkholderia cepacia GG4]
Length = 489
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++ +V DEADR+ +MGF
Sbjct: 148 LSNLDILVLDEADRMLDMGF 167
>gi|398820506|ref|ZP_10579026.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. YR681]
gi|398228828|gb|EJN14930.1| DNA/RNA helicase, superfamily II [Bradyrhizobium sp. YR681]
Length = 524
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
G+ +L ST +GG M Q L D++VATPGR L +V LKL S++++V DEA
Sbjct: 113 GRHIRLSSTLAIGGVPMGRQVRALMPGVDVLVATPGRLLDLVQSNGLKLGSVEFLVLDEA 172
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 173 DRMLDMGF 180
>gi|386015150|ref|YP_005933429.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|386080118|ref|YP_005993643.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
gi|327393211|dbj|BAK10633.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|354989299|gb|AER33423.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
Length = 449
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V E K+ L+S + GG S++ Q +L DI+VATPGR L +V + +
Sbjct: 87 LAAQVGENVVEYSKYLPLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLVHQNAVD 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSQVEVLVLDEADRMLDMGF 166
>gi|295397627|ref|ZP_06807702.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
gi|294974090|gb|EFG49842.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
Length = 509
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + + LGKF + +T + GG S+ +Q L +P +V+ TPGR L ++ LKL++
Sbjct: 83 QTGEELYRLGKFKGIHTTTVYGGASIGHQIKLLKKNPPVVIGTPGRILDLIKRGVLKLNN 142
Query: 77 IQYVVFDEADRLFEMGF--DVE 96
++ +V DEAD + +MGF D+E
Sbjct: 143 VETLVLDEADEMLKMGFVEDIE 164
>gi|291616785|ref|YP_003519527.1| RhlE [Pantoea ananatis LMG 20103]
gi|291151815|gb|ADD76399.1| RhlE [Pantoea ananatis LMG 20103]
Length = 449
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V E K+ L+S + GG S++ Q +L DI+VATPGR L +V + +
Sbjct: 87 LAAQVGENVVEYSKYLPLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLVHQNAVD 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 147 LSQVEVLVLDEADRMLDMGF 166
>gi|410625113|ref|ZP_11335901.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
gi|410155244|dbj|GAC22670.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
Length = 426
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + +FT + T L GG + Q ++L A DIV++TPGR L + ++
Sbjct: 86 LAEQLATNIANYAQFTDISVTALYGGVKLGGQASKLKAGVDIVISTPGRLLEHMTLKNVE 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L+++++VV DEADR+ +MGF DV Q
Sbjct: 146 LANVEFVVLDEADRMLDMGFIADVRQ 171
>gi|442610145|ref|ZP_21024870.1| ATP-dependent RNA helicase VVA0939 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
gi|441748364|emb|CCQ10932.1| ATP-dependent RNA helicase VVA0939 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
Length = 424
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V+Q +K +FT + L GG ++ Q L IVVATPGR L + +
Sbjct: 83 LVEQIANNIKAFAQFTDINVVALFGGVNVAGQRDALAKGAQIVVATPGRLLDHITRANIS 142
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
L+ +QY+V DEADR+ +MGF + Q D
Sbjct: 143 LAEVQYLVLDEADRMLDMGFITDIQKVID 171
>gi|254491257|ref|ZP_05104438.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxidans
DMS010]
gi|224463770|gb|EEF80038.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxydans
DMS010]
Length = 442
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q V+ GKF L+ST + GG ++ Q RL DI+VATPGR L + + ++
Sbjct: 85 LAAQVADSVQTYGKFLPLRSTVVFGGVKINPQMMRLRRGADILVATPGRLLDLYQQNAVR 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
++ ++ DEADR+ +MGF
Sbjct: 145 FDHLEVLILDEADRMLDMGF 164
>gi|157118927|ref|XP_001659252.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875535|gb|EAT39760.1| AAEL008463-PA [Aedes aegypti]
Length = 792
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 17 QTFK-FVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKL 74
QT++ FVK L +T + S L GG+ + ARL A +I+++TPGRF H+ +K+
Sbjct: 244 QTYELFVKLLKPYTWIVSGYLSGGEKRKAEKARLRAGLNILISTPGRFCDHLKNTESMKM 303
Query: 75 SSIQYVVFDEADRLFEMGFD 94
S+++Y++ DEADRL E+G++
Sbjct: 304 SAVKYLILDEADRLLELGYE 323
>gi|121604151|ref|YP_981480.1| DEAD/DEAH box helicase [Polaromonas naphthalenivorans CJ2]
gi|120593120|gb|ABM36559.1| DEAD/DEAH box helicase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 571
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G + LI P + Q + V+ GK+ L S + GG M Q +L DI+VA
Sbjct: 74 GVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQIEKLRRGVDILVA 133
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + L LS +Q ++ DEADR+ +MGF
Sbjct: 134 TPGRLLDHASQGTLDLSQVQILILDEADRMLDMGF 168
>gi|392420851|ref|YP_006457455.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri CCUG 29243]
gi|452750382|ref|ZP_21950132.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri NF13]
gi|390983039|gb|AFM33032.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri CCUG 29243]
gi|452005755|gb|EMD98037.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri NF13]
Length = 443
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A + PDI++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAVMRKVPDILIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ ++ DEADR+ +MGF DV++
Sbjct: 131 RMIEHLNAGTLVLKDVEMLILDEADRMLDMGFAEDVQR 168
>gi|163749401|ref|ZP_02156649.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161330810|gb|EDQ01737.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 430
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
+ G+FT L++ + GG +M+ Q L+A DI+VATPGR V + L LS + ++
Sbjct: 92 ITRYGQFTSLKTLAVYGGANMNPQRKALNAGVDILVATPGRLFDFVGQHGLNLSDVTSLI 151
Query: 82 FDEADRLFEMGF--DVEQ 97
DEADR+ +MGF D+E+
Sbjct: 152 IDEADRMLDMGFVRDIER 169
>gi|357404833|ref|YP_004916757.1| ATP-dependent RNA helicase srmB [Methylomicrobium alcaliphilum 20Z]
gi|351717498|emb|CCE23163.1| ATP-dependent RNA helicase srmB [Methylomicrobium alcaliphilum 20Z]
Length = 440
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +QT K ++L +FT ++S ++GG+ Q A S I++ATPGR + ++ E
Sbjct: 94 LAKQTHKQCRQLAEFTPIKSGMIIGGEDFKKQSALFAKSTAIIIATPGRLIEVIEEGSAD 153
Query: 74 LSSIQYVVFDEADRLFEMGF 93
S + ++ DEADR+ +MGF
Sbjct: 154 FSRLDLLILDEADRMLDMGF 173
>gi|21673860|ref|NP_661925.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
gi|21646994|gb|AAM72267.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
Length = 414
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
G+ T L +T + GG + + Q ARL DI+VATPGR L ++ + L L I+Y V DEA
Sbjct: 98 GRHTGLINTVIFGGVNQNPQTARLVRGVDILVATPGRLLDLIGQGHLHLRDIEYFVLDEA 157
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 158 DRMLDMGF 165
>gi|399020612|ref|ZP_10722739.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398094379|gb|EJL84742.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 466
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 2 GFANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVA 58
G I LI P + Q + V+ GK+ L S C+ GG ++ Q +L DI+VA
Sbjct: 73 GHVPIRALILTPTRELAAQVEESVRLYGKYLPLTSACIFGGVGINPQIRQLKQGVDILVA 132
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR L + + + L +IQ ++ DEADR+ +MGF
Sbjct: 133 TPGRLLDHMQQNTVDLRNIQVLILDEADRMLDMGF 167
>gi|171909846|ref|ZP_02925316.1| DEAD/DEAH box helicase domain protein [Verrucomicrobium spinosum
DSM 4136]
Length = 377
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I +Q FKF K + K+ + GGD MD Q +RL IVV TPGR + +V L
Sbjct: 92 IGKQLFKFTKHVPD--KIFVETITGGDDMDLQISRLRRPTHIVVGTPGRLMDLVQREALN 149
Query: 74 LSSIQYVVFDEADRLFEMGFDVE 96
LS ++Y+V DEAD + +GF E
Sbjct: 150 LSKVRYLVLDEADEMLSLGFKKE 172
>gi|357130258|ref|XP_003566767.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
[Brachypodium distachyon]
Length = 828
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I+++ KF G+ +++ STCL GG Q L D+VVATPGR I+ ++
Sbjct: 246 ILEEAVKF----GRSSRISSTCLYGGAPKGPQLRDLERGVDVVVATPGRLNDILEMRKIS 301
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L + Y+V DEADR+ +MGF+
Sbjct: 302 LKQVSYLVLDEADRMLDMGFE 322
>gi|326491449|dbj|BAJ94202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I+++ KF G+ +++ STCL GG Q L D+VVATPGR I+ ++
Sbjct: 100 ILEEAVKF----GRSSRISSTCLYGGAPKGPQLRDLERGVDVVVATPGRLNDILEMRKIS 155
Query: 74 LSSIQYVVFDEADRLFEMGFD 94
L + Y+V DEADR+ +MGF+
Sbjct: 156 LKQVSYLVLDEADRMLDMGFE 176
>gi|300312872|ref|YP_003776964.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300075657|gb|ADJ65056.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 487
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 27 KFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEAD 86
+FT L+ST + GG M Q A L A +IV+ATPGR L V + + LS Q +V DEAD
Sbjct: 117 RFTPLRSTVVFGGVDMAPQTAILRAGVEIVIATPGRLLDHVQQKTVNLSQTQILVMDEAD 176
Query: 87 RLFEMGF 93
R+ +MGF
Sbjct: 177 RMLDMGF 183
>gi|217970063|ref|YP_002355297.1| DEAD/DEAH box helicase [Thauera sp. MZ1T]
gi|217507390|gb|ACK54401.1| DEAD/DEAH box helicase domain protein [Thauera sp. MZ1T]
Length = 545
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q F+ VK K L+S C+ GG + Q A L +IV+ATPGR L + + +
Sbjct: 89 LAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQQAELRRGIEIVIATPGRLLDHLEQKSIN 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSQVEVLVLDEADRMLDMGF 168
>gi|394988591|ref|ZP_10381426.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
gi|393791970|dbj|GAB71065.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
Length = 476
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L+ST + GG ++ Q A L +I+VATPGR L V + +
Sbjct: 89 LAAQVEESVQTYGKYLPLKSTVVFGGVNIKEQIAALKGGVEILVATPGRLLDHVEQKTVN 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 149 LSKVEILVLDEADRMLDMGF 168
>gi|419954928|ref|ZP_14471062.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri TS44]
gi|387968315|gb|EIK52606.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri TS44]
Length = 444
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ ++ DEADR+ +MGF DV++
Sbjct: 131 RLIEHLNAGTLILKDVEILILDEADRMLDMGFAEDVQR 168
>gi|85711185|ref|ZP_01042245.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
gi|85695098|gb|EAQ33036.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
Length = 404
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q ++ + T+L S + GG + +Q +RL S DIV+ATPGR L ++ + +
Sbjct: 87 LAEQIYQQAEMFRALTELSSVVVTGGVNYGSQLSRLEQSHDIVIATPGRLLDLLEAEQYE 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++++V DEADR+ +MGF
Sbjct: 147 LEAVEWLVIDEADRMLDMGF 166
>gi|71908923|ref|YP_286510.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, partial
[Dechloromonas aromatica RCB]
gi|71848544|gb|AAZ48040.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Dechloromonas aromatica RCB]
Length = 507
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q F+ VK K T +++ C GG + Q A L +I+VATPGR L V +
Sbjct: 111 LAMQVFESVKTYSKHTPIRAMCAYGGVDIRPQIAELKKGVEILVATPGRLLDHVENKSVS 170
Query: 74 LSSIQYVVFDEADRLFEMGF 93
+S+Q +V DEADR+ +MGF
Sbjct: 171 FNSVQALVLDEADRMLDMGF 190
>gi|412989029|emb|CCO15620.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q F K L + K+ S +LGG Q L A D+VV TPGR + E L
Sbjct: 168 LAEQIFAVTKSLSHYAKVSSRLILGGRPFALQKDNLEAPVDVVVGTPGRLVKHCEEKSLF 227
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
L S ++VV DEAD LFE GF DVE+
Sbjct: 228 LGSCKFVVLDEADTLFEAGFGEDVER 253
>gi|225159079|ref|ZP_03725387.1| DEAD/DEAH box helicase domain protein [Diplosphaera colitermitum
TAV2]
gi|224802337|gb|EEG20601.1| DEAD/DEAH box helicase domain protein [Diplosphaera colitermitum
TAV2]
Length = 451
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVF 82
++ G+FT ++ST + GG Q + L A DIV+AT GR + + E E++L S++ ++
Sbjct: 91 RDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLIL 150
Query: 83 DEADRLFEMGF 93
DE DR+ +MGF
Sbjct: 151 DEVDRMLDMGF 161
>gi|224060117|ref|XP_002300045.1| predicted protein [Populus trichocarpa]
gi|222847303|gb|EEE84850.1| predicted protein [Populus trichocarpa]
Length = 791
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
+ GK ++ TCL GG Q L DIVVATPGR I+ + LS + Y+V D
Sbjct: 259 KFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRRVSLSQVSYLVLD 318
Query: 84 EADRLFEMGFD 94
EADR+ +MGF+
Sbjct: 319 EADRMLDMGFE 329
>gi|91201974|emb|CAJ75034.1| similar to ATP-independent RNA helicase DbpA [Candidatus Kuenenia
stuttgartiensis]
Length = 449
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + K LG T L+S + GG S+ Q RL + +IVVA PGR L + + ++
Sbjct: 83 LAEQVLQDFKTLGSKTSLRSISIYGGVSITQQINRLRSGVEIVVACPGRLLDHMKQRTIE 142
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEAD +F+MGF
Sbjct: 143 LSRVEVLVLDEADHMFDMGF 162
>gi|255534879|ref|YP_003095250.1| Cold-shock DEAD-box protein A [Flavobacteriaceae bacterium 3519-10]
gi|255341075|gb|ACU07188.1| Cold-shock DEAD-box protein A [Flavobacteriaceae bacterium 3519-10]
Length = 571
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 2 GFANINYLISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVV 57
G I +L+ P + + K++ ++K +++T + GG S+ +Q L P I+V
Sbjct: 68 GSRKIQFLVLCPTRELCLQITKDIKNYSKYMNNIKTTAVYGGSSITDQIRSLRDKPQIIV 127
Query: 58 ATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
TPGR + ++ L S IQ++V DEAD + MGF
Sbjct: 128 GTPGRVIDLINRKALDFSEIQWLVLDEADEMLSMGF 163
>gi|255538978|ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 783
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEMELKLS 75
Q V++L +FT ++ ++GG S Q + L + PDIVVATPGR + H+ M + L
Sbjct: 233 QVHSMVEKLAQFTDIRCCLIVGGLSTKVQESALRSMPDIVVATPGRMIDHLRNTMSVDLD 292
Query: 76 SIQYVVFDEADRLFEMGFDVE 96
+ ++ DEADRL E+GF E
Sbjct: 293 DLAVLILDEADRLLELGFSAE 313
>gi|423201022|ref|ZP_17187602.1| hypothetical protein HMPREF1167_01185 [Aeromonas veronii AER39]
gi|404618005|gb|EKB14926.1| hypothetical protein HMPREF1167_01185 [Aeromonas veronii AER39]
Length = 416
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + V G+ T L ST + GG S+ Q L A DI++ATPGR L + + L L S
Sbjct: 92 QVAESVARYGQGTGLTSTLVYGGVSIAAQVEALQAGVDILIATPGRLLDHLRQGALSLDS 151
Query: 77 IQYVVFDEADRLFEMGFDVE-----QQSPCD 102
++++VFDEADR+ +MGF E +Q P D
Sbjct: 152 LRHLVFDEADRMLDMGFMDEIKALLKQIPAD 182
>gi|384222064|ref|YP_005613230.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
6]
gi|354960963|dbj|BAL13642.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum USDA
6]
Length = 522
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
G+ +L ST +GG M Q L D++VATPGR L +V LKL S++++V DEA
Sbjct: 99 GRHIRLSSTLAIGGVPMGRQVRALMPGLDVLVATPGRLLDLVQSNGLKLGSVEFLVLDEA 158
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 159 DRMLDMGF 166
>gi|383758280|ref|YP_005437265.1| ATP-dependent RNA helicase RhlE [Rubrivivax gelatinosus IL144]
gi|381378949|dbj|BAL95766.1| ATP-dependent RNA helicase RhlE [Rubrivivax gelatinosus IL144]
Length = 466
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L S + GG M Q RL DI+VATPGR L + L
Sbjct: 89 LAAQVEESVRAYGKYLPLTSMVMFGGVGMQPQIDRLKKGVDILVATPGRLLDHHGQGTLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS++Q +V DEADR+ +MGF
Sbjct: 149 LSNVQILVLDEADRMLDMGF 168
>gi|328781103|ref|XP_394925.4| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Apis
mellifera]
Length = 626
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 7 NYLISFPIVQQTFKFVKELGKFT--KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
N LI P + + KE+ K++ +++ CL GG S Q + +IV+ATPGR
Sbjct: 290 NVLIMAPTRELALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEGVEIVIATPGRLN 349
Query: 65 HIVVEMELKLSSIQYVVFDEADRLFEMGFD 94
+V L +SSI Y+V DEADR+ +MGF+
Sbjct: 350 DLVEAKILNISSITYLVLDEADRMLDMGFE 379
>gi|294627204|ref|ZP_06705791.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292598443|gb|EFF42593.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 389
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 30 KLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLF 89
+L+S GG S++ Q L DIVVATPGR L +V L+LS + +V DEADRL
Sbjct: 107 RLKSVVATGGSSINPQLLALRGGADIVVATPGRLLDLVEHNALRLSEVATLVLDEADRLL 166
Query: 90 EMGFDVE 96
E+GF E
Sbjct: 167 ELGFGAE 173
>gi|302879666|ref|YP_003848230.1| DEAD/DEAH box helicase [Gallionella capsiferriformans ES-2]
gi|302582455|gb|ADL56466.1| DEAD/DEAH box helicase domain protein [Gallionella
capsiferriformans ES-2]
Length = 504
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L+S + GG +++ Q L DI+VATPGR L V + L
Sbjct: 96 LAAQVEESVQTYGKYLSLKSLVMFGGVNINPQIKSLRGQVDILVATPGRLLDHVGQKTLD 155
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+++ ++ DEADR+ +MGF
Sbjct: 156 LSAVEILILDEADRMLDMGF 175
>gi|325982424|ref|YP_004294826.1| DEAD/DEAH box helicase domain-containing protein [Nitrosomonas sp.
AL212]
gi|325531943|gb|ADZ26664.1| DEAD/DEAH box helicase domain protein [Nitrosomonas sp. AL212]
Length = 476
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++ V+ GK+ L+S + G ++D Q A + + +I+VATPGR L + + L LS
Sbjct: 96 QVYESVRAYGKYVALKSAVIYDGVNIDVQIAAIRSGVEILVATPGRLLDHLQQKNLILSK 155
Query: 77 IQYVVFDEADRLFEMGF--DVEQ 97
I+ ++ DEADR+ +MGF D++Q
Sbjct: 156 IEILILDEADRMLDMGFLPDIKQ 178
>gi|46580391|ref|YP_011199.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153190|ref|YP_005702126.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris RCH1]
gi|46449808|gb|AAS96458.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233634|gb|ADP86488.1| DEAD/DEAH box helicase domain protein [Desulfovibrio vulgaris RCH1]
Length = 462
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +QT V+ LG ++L+ST + GG + Q RL A ++VV PGR L + L
Sbjct: 82 LAEQTHDHVRRLGSMSRLRSTTIYGGVGVVAQALRLRAGVEVVVGCPGRLLDHIRRGNLD 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LSS++ +V DE D LF++GF
Sbjct: 142 LSSLEVLVLDEGDSLFDLGF 161
>gi|119773945|ref|YP_926685.1| DEAD/DEAH box helicase [Shewanella amazonensis SB2B]
gi|119766445|gb|ABL99015.1| DEAD/DEAH box helicase domain protein [Shewanella amazonensis SB2B]
Length = 432
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q +K K +L T + GG D Q +L DI+VATPGR L ++ L
Sbjct: 86 LTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQKLRKGTDIIVATPGRLLEHLLAGNLS 145
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
L++++++V DEADR+ +MGF + Q
Sbjct: 146 LAAVEFLVLDEADRMLDMGFIADIQ 170
>gi|120602237|ref|YP_966637.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris DP4]
gi|120562466|gb|ABM28210.1| DEAD/DEAH box helicase domain protein [Desulfovibrio vulgaris DP4]
Length = 462
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +QT V+ LG ++L+ST + GG + Q RL A ++VV PGR L + L
Sbjct: 82 LAEQTHDHVRRLGSMSRLRSTTIYGGVGVVAQALRLRAGVEVVVGCPGRLLDHIRRGNLD 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LSS++ +V DE D LF++GF
Sbjct: 142 LSSLEVLVLDEGDSLFDLGF 161
>gi|350596902|ref|XP_003126138.3| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial [Sus
scrofa]
Length = 771
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG ++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>gi|339326719|ref|YP_004686412.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
gi|338166876|gb|AEI77931.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
Length = 520
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V K T L+ST + GG M+ Q L +I+VATPGR L V + +
Sbjct: 126 LADQVYDNVARYAKHTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQQKSVN 185
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 186 LSQVQMLVLDEADRMLDMGF 205
>gi|219114457|ref|XP_002176399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402645|gb|EEC42635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 575
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 2 GFANINYLISFPIVQQTFKFVKELGKFTK---LQSTCLLGGDSMDNQFARLHASPDIVVA 58
GF L+ P + + + ++E KF + ++S C GG S Q A L + V+A
Sbjct: 209 GFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIAALQRGVECVIA 268
Query: 59 TPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQS 99
TPGR ++ + LS +QY+V DEADR+ +MGF+ + +S
Sbjct: 269 TPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRS 309
>gi|113868675|ref|YP_727164.1| ATP-dependent helicase [Ralstonia eutropha H16]
gi|113527451|emb|CAJ93796.1| ATP-dependent helicase, superfamily II DNA and RNA helicase
[Ralstonia eutropha H16]
Length = 520
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V K T L+ST + GG M+ Q L +I+VATPGR L V + +
Sbjct: 126 LADQVYDNVARYAKHTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQQKSVN 185
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 186 LSQVQMLVLDEADRMLDMGF 205
>gi|404492159|ref|YP_006716265.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
gi|77544268|gb|ABA87830.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
Length = 432
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q + + ELG+ T L+S + GG ++ Q A L DIVVA PGR + + + +
Sbjct: 82 LAEQIHQAIGELGRHTGLRSMTVYGGVNIRPQIAGLKRGVDIVVACPGRLIDHIGQKTID 141
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS+I+ +V DEAD++F+MGF
Sbjct: 142 LSNIEVLVLDEADQMFDMGF 161
>gi|410031078|ref|ZP_11280908.1| DNA/RNA helicase [Marinilabilia sp. AK2]
Length = 453
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+V Q + V GKFT L+ CL GG Q +L A DI+++TPGRF+ + + E+
Sbjct: 87 LVMQIEEAVVTFGKFTDLRYVCLYGGLGPKTQIEKLQAGVDIIISTPGRFIDLYKKGEIF 146
Query: 74 LSSIQYVVFDEADRLFEMGF 93
I+ ++ DEAD++ +MGF
Sbjct: 147 PKEIKTMILDEADKMLDMGF 166
>gi|386283896|ref|ZP_10061119.1| dead/deah box helicase domain-containing protein [Sulfurovum sp.
AR]
gi|385344799|gb|EIF51512.1| dead/deah box helicase domain-containing protein [Sulfurovum sp.
AR]
Length = 445
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ +Q ++ GK+ L+S L GG ++ +Q RL A DI+VAT GR L + + +
Sbjct: 85 LAKQVHASIEAYGKYLPLKSIVLYGGANLTSQANRLKAGIDIIVATSGRLLEHIGQKNIN 144
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S+ Y+V DEAD + +MGF
Sbjct: 145 LESVAYLVLDEADTILDMGF 164
>gi|340504430|gb|EGR30873.1| hypothetical protein IMG5_122040 [Ichthyophthirius multifiliis]
Length = 510
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
+ GK K ST + GG S Q L P+IVVATPGR + V + L +I Y+V D
Sbjct: 206 KFGKAYKAYSTAIYGGASRSVQEQHLQKKPEIVVATPGRLIDFVQSKAVDLRTITYLVLD 265
Query: 84 EADRLFEMGFD 94
EADR+ +MGF+
Sbjct: 266 EADRMLDMGFE 276
>gi|422624611|ref|ZP_16691816.1| helicase, partial [Pseudomonas syringae pv. pisi str. 1704B]
gi|330948173|gb|EGH48433.1| helicase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 101
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
+I +I P + QQT K V+ +FT +++ + GG+ Q A L PDI++ TPG
Sbjct: 10 DIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPG 69
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
R L + L L ++ +V DEADR+ +MGF
Sbjct: 70 RLLEQLNAGNLDLKHVEVLVLDEADRMLDMGF 101
>gi|24662330|ref|NP_648413.1| CG6418 [Drosophila melanogaster]
gi|7294797|gb|AAF50131.1| CG6418 [Drosophila melanogaster]
gi|16769458|gb|AAL28948.1| LD32732p [Drosophila melanogaster]
gi|220946788|gb|ACL85937.1| CG6418-PB [synthetic construct]
Length = 791
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +I+VATPGR + +V L
Sbjct: 357 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRR 416
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F MGF+ + +S C+
Sbjct: 417 VTFLVLDEADRMFHMGFEPQVRSICN 442
>gi|195552710|ref|XP_002076525.1| GD17585 [Drosophila simulans]
gi|194202136|gb|EDX15712.1| GD17585 [Drosophila simulans]
Length = 786
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +I+VATPGR + +V L
Sbjct: 354 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRR 413
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F MGF+ + +S C+
Sbjct: 414 VTFLVLDEADRMFHMGFEPQVRSICN 439
>gi|195493240|ref|XP_002094331.1| GE20258 [Drosophila yakuba]
gi|194180432|gb|EDW94043.1| GE20258 [Drosophila yakuba]
Length = 789
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +I+VATPGR + +V L
Sbjct: 357 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRR 416
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F MGF+ + +S C+
Sbjct: 417 VTFLVLDEADRMFHMGFEPQVRSICN 442
>gi|195326619|ref|XP_002030023.1| GM24798 [Drosophila sechellia]
gi|194118966|gb|EDW41009.1| GM24798 [Drosophila sechellia]
Length = 786
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + K+ GK L C GG S Q L +I+VATPGR + +V L
Sbjct: 354 QIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRR 413
Query: 77 IQYVVFDEADRLFEMGFDVEQQSPCD 102
+ ++V DEADR+F MGF+ + +S C+
Sbjct: 414 VTFLVLDEADRMFHMGFEPQVRSICN 439
>gi|167585532|ref|ZP_02377920.1| DEAD/DEAH box helicase domain protein [Burkholderia ubonensis Bu]
Length = 408
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALRRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSQLDILVLDEADRMLDMGF 167
>gi|160876637|ref|YP_001555953.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|378709847|ref|YP_005274741.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418021955|ref|ZP_12660942.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|160862159|gb|ABX50693.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|315268836|gb|ADT95689.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353538180|gb|EHC07735.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 443
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF-- 93
L GG +++Q A L A P ++VATPGR L + + + L SI+++V DEADRL EMGF
Sbjct: 128 LCGGVPLEDQLAELTAKPQVLVATPGRLLDLCKQSHISLDSIKHLVLDEADRLLEMGFWP 187
Query: 94 DVEQ 97
DV++
Sbjct: 188 DVQK 191
>gi|332525968|ref|ZP_08402109.1| DEAD/DEAH box helicase domain-containing protein [Rubrivivax
benzoatilyticus JA2]
gi|332109519|gb|EGJ10442.1| DEAD/DEAH box helicase domain-containing protein [Rubrivivax
benzoatilyticus JA2]
Length = 500
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ L S + GG M Q RL DI+VATPGR L + L
Sbjct: 89 LAAQVEESVRAYGKYLPLTSMVMFGGVGMQPQIDRLRKGVDILVATPGRLLDHHGQGTLD 148
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 149 LSQVQILVLDEADRMLDMGF 168
>gi|381188403|ref|ZP_09895965.1| ATP-dependent RNA helicase RhlE [Flavobacterium frigoris PS1]
gi|379650191|gb|EIA08764.1| ATP-dependent RNA helicase RhlE [Flavobacterium frigoris PS1]
Length = 428
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q +KE +F L+ST + GG + Q A+L DI+VATPGR + + + +
Sbjct: 85 LAAQILANIKEYSEFLDLRSTVIFGGVNQKPQVAQLRQGIDILVATPGRLIDLQNQGLIT 144
Query: 74 LSSIQYVVFDEADRLFEMGF--DVEQ 97
LS ++ +V DEADR+ +MGF D+E+
Sbjct: 145 LSKVEILVLDEADRMLDMGFLRDIER 170
>gi|255101321|ref|ZP_05330298.1| ATP-dependent RNA helicase [Clostridium difficile QCD-63q42]
Length = 497
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 3 FANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVAT 59
+ NI LI P + Q + ++G+ K++ + + G S+ +Q A L IVVAT
Sbjct: 69 YNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVAT 128
Query: 60 PGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQ 97
PGR L + +KL +++Y+V DEAD++F GF VEQ
Sbjct: 129 PGRILDHINRGSIKLENVKYLVIDEADKMFNKGF-VEQ 165
>gi|221200134|ref|ZP_03573177.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD2M]
gi|221206713|ref|ZP_03579725.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD2]
gi|221173368|gb|EEE05803.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD2]
gi|221180373|gb|EEE12777.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD2M]
Length = 480
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|221211314|ref|ZP_03584293.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD1]
gi|221168675|gb|EEE01143.1| putative ATP-dependent RNA helicase RhlE [Burkholderia multivorans
CGD1]
Length = 480
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|206559326|ref|YP_002230087.1| putative ATP-dependent RNA helicase 1 [Burkholderia cenocepacia
J2315]
gi|421868477|ref|ZP_16300125.1| ATP-dependent RNA helicase RhlE [Burkholderia cenocepacia H111]
gi|198035364|emb|CAR51239.1| putative ATP-dependent RNA helicase 1 [Burkholderia cenocepacia
J2315]
gi|358071499|emb|CCE51003.1| ATP-dependent RNA helicase RhlE [Burkholderia cenocepacia H111]
Length = 477
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|225463253|ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera]
Length = 549
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + E GK ++S CL GG S Q + L + DIV+ TPGR ++
Sbjct: 216 LAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCC 275
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L+ + +VV DEADR+ +MGF+ E +S
Sbjct: 276 LTEVSFVVLDEADRMLDMGFEPEVRS 301
>gi|161523807|ref|YP_001578819.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC 17616]
gi|189351431|ref|YP_001947059.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
gi|160341236|gb|ABX14322.1| DEAD/DEAH box helicase domain protein [Burkholderia multivorans
ATCC 17616]
gi|189335453|dbj|BAG44523.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
Length = 480
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|170734034|ref|YP_001765981.1| DEAD/DEAH box helicase [Burkholderia cenocepacia MC0-3]
gi|169817276|gb|ACA91859.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
MC0-3]
Length = 486
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|107023606|ref|YP_621933.1| DEAD/DEAH box helicase [Burkholderia cenocepacia AU 1054]
gi|116690690|ref|YP_836313.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|105893795|gb|ABF76960.1| DEAD/DEAH box helicase-like protein [Burkholderia cenocepacia AU
1054]
gi|116648779|gb|ABK09420.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
HI2424]
Length = 486
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ K+ KL+ST + GG S++ Q L DIVVATPGR L + + +
Sbjct: 88 LAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTID 147
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS + +V DEADR+ +MGF
Sbjct: 148 LSDLDILVLDEADRMLDMGF 167
>gi|61699146|gb|AAX53575.1| DEAD-box RNA helicase [Clistosaccus paguri]
Length = 126
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++ VK GK+ L+S + GG ++D Q + A +I+VATPGR L + + L LS
Sbjct: 50 QVYESVKTYGKYLTLKSAVIYGGVNIDPQIQEIRAGVEILVATPGRLLDHIQQKNLVLSK 109
Query: 77 IQYVVFDEADRLFEMGF 93
++ +V DEAD + +MG+
Sbjct: 110 VEILVLDEADSMLDMGY 126
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 21 FVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYV 80
FVK K T+++S + GG S+D Q L A DI+VATPGR L + L L+ ++++
Sbjct: 112 FVK-YAKLTQVKSALVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGSLNLNQLEFL 170
Query: 81 VFDEADRLFEMGFDVE 96
VFDEADR+ +MGF E
Sbjct: 171 VFDEADRMLDMGFKDE 186
>gi|221131953|ref|XP_002164829.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Hydra
magnipapillata]
Length = 674
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
+ G T+++STC+ GG S Q L +IVVATPGR + ++ ++ L + Y+V D
Sbjct: 201 QFGLTTRVRSTCIYGGASKGPQIRDLERGSEIVVATPGRLIDLIEIRKISLKRVTYLVLD 260
Query: 84 EADRLFEMGFD 94
EADR+ +MGF+
Sbjct: 261 EADRMLDMGFE 271
>gi|217972233|ref|YP_002356984.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|217497368|gb|ACK45561.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
Length = 443
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF-- 93
L GG +++Q A L A P ++VATPGR L + + + L SI+++V DEADRL EMGF
Sbjct: 128 LCGGVPLEDQLAELAAKPQVLVATPGRLLDLCKQSHISLDSIKHLVLDEADRLLEMGFWP 187
Query: 94 DVEQ 97
DV++
Sbjct: 188 DVQK 191
>gi|146329248|ref|YP_001209905.1| ATP-dependent RNA helicase [Dichelobacter nodosus VCS1703A]
gi|146232718|gb|ABQ13696.1| ATP-dependent RNA helicase [Dichelobacter nodosus VCS1703A]
Length = 442
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 19 FKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQ 78
F++ +E F +L S L+GG + Q L IVVATPGR L V E L LS I+
Sbjct: 95 FQYSRE---FKELYSITLVGGTAYQKQIRALKKGVSIVVATPGRLLDHVREGHLDLSQIR 151
Query: 79 YVVFDEADRLFEMGF 93
Y+V DEADR+ +MGF
Sbjct: 152 YLVLDEADRMLDMGF 166
>gi|409397522|ref|ZP_11248389.1| ATP-dependent RNA helicase SrmB [Pseudomonas sp. Chol1]
gi|409117977|gb|EKM94402.1| ATP-dependent RNA helicase SrmB [Pseudomonas sp. Chol1]
Length = 444
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 5 NINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPG 61
++ LI P + QQT K V+ +FT ++S + GG+ Q A L PD+++ TPG
Sbjct: 71 DVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDVLIGTPG 130
Query: 62 RFLHIVVEMELKLSSIQYVVFDEADRLFEMGF--DVEQ 97
R + + L L ++ ++ DEADR+ +MGF DV++
Sbjct: 131 RLIEHLNAGTLILKDVEILILDEADRMLDMGFAEDVQR 168
>gi|254515124|ref|ZP_05127185.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium NOR5-3]
gi|219677367|gb|EED33732.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium NOR5-3]
Length = 444
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V++ G++ +S + GG S++ Q +L DIVVATPGR L V + +
Sbjct: 86 LAAQVHESVRDYGRYLPFRSAVIFGGVSINPQKQKLIKGVDIVVATPGRLLDHVQQRSID 145
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS I+ +V DEADR+ +MGF
Sbjct: 146 LSRIEILVLDEADRMLDMGF 165
>gi|440295406|gb|ELP88319.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 571
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%)
Query: 16 QQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLS 75
QQ + + + T ++S C+ GG Q + DI+VATPGR LH + + LS
Sbjct: 216 QQIHEEAVKFTQNTPIKSVCVHGGSETYPQIQEMGKGCDILVATPGRLLHFMERKIVCLS 275
Query: 76 SIQYVVFDEADRLFEMGFDVEQQSPCD 102
S+++++FDEADR+ +MGF+ + + CD
Sbjct: 276 SVRFLIFDEADRMLDMGFEPQIRQICD 302
>gi|391342798|ref|XP_003745702.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Metaseiulus
occidentalis]
Length = 795
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K++G +++ ++GG S ++Q +L +IV+ATPGR + ++ L
Sbjct: 460 IEEETIKFAKKMG----IRTVAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVLENRYLV 515
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS Y+V DEADR+ +MGF+ + Q
Sbjct: 516 LSRCTYIVLDEADRMIDMGFEPDVQ 540
>gi|147777235|emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]
Length = 539
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ + E GK ++S CL GG S Q + L + DIV+ TPGR ++
Sbjct: 206 LAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCC 265
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L+ + +VV DEADR+ +MGF+ E +S
Sbjct: 266 LTEVSFVVLDEADRMLDMGFEPEVRS 291
>gi|119896607|ref|YP_931820.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
gi|119669020|emb|CAL92933.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
Length = 447
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 14 IVQQTFKFVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMEL 72
+ QQ + VK G+ + L + CL+GG Q +L D+VVATPGR L + +L
Sbjct: 85 LAQQVEEAVKTYGRALRWLNTACLVGGAPFFAQVKQLSRPVDVVVATPGRLLDHLNRRKL 144
Query: 73 KLSSIQYVVFDEADRLFEMGF--DVE 96
KLS ++ +V DEADR+ +MGF D+E
Sbjct: 145 KLSDVETLVLDEADRMLDMGFAEDIE 170
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K L +++S ++GG S + Q RL +IV+ATPGR + ++ L
Sbjct: 251 IDEETTKFAKML----EIRSVAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLV 306
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQSPCD 102
LS Y+V DEADR+ +MGF+ E Q D
Sbjct: 307 LSRCTYIVLDEADRMIDMGFEGEVQKILD 335
>gi|255307197|ref|ZP_05351368.1| ATP-dependent RNA helicase [Clostridium difficile ATCC 43255]
Length = 497
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 3 FANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVAT 59
+ NI LI P + Q + ++G+ K++ + + G S+ +Q A L IVVAT
Sbjct: 69 YNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVAT 128
Query: 60 PGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQ 97
PGR L + +KL +++Y+V DEAD++F GF VEQ
Sbjct: 129 PGRILDHINRGSIKLENVKYLVIDEADKMFNKGF-VEQ 165
>gi|189346086|ref|YP_001942615.1| DEAD/DEAH box helicase [Chlorobium limicola DSM 245]
gi|189340233|gb|ACD89636.1| DEAD/DEAH box helicase domain protein [Chlorobium limicola DSM 245]
Length = 418
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 23 KELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVF 82
K G+ T L ST + GG + + Q A L DI++ATPGR L ++ + L L +I++ V
Sbjct: 95 KAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVL 154
Query: 83 DEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 DEADRMLDMGF 165
>gi|440747418|ref|ZP_20926677.1| Cold-shock DEAD-box protein A [Mariniradius saccharolyticus AK6]
gi|436484338|gb|ELP40342.1| Cold-shock DEAD-box protein A [Mariniradius saccharolyticus AK6]
Length = 607
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 15 VQQTFKFVKELGKFTK-LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
VQ + VK L KF K L STC+ GGDSMD Q L +VV TPGR + + LK
Sbjct: 87 VQVEGEIVK-LSKFKKGLSSTCIYGGDSMDRQIRDLKKGVQVVVGTPGRIMDHMDRGTLK 145
Query: 74 LSSIQYVVFDEADRLFEMGF--DVE 96
L + +V DEAD + +MGF D+E
Sbjct: 146 LDHVGIIVLDEADEMLDMGFREDIE 170
>gi|126699799|ref|YP_001088696.1| ATP-dependent RNA helicase [Clostridium difficile 630]
gi|115251236|emb|CAJ69067.1| ATP-dependent RNA helicase [Clostridium difficile 630]
Length = 497
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 3 FANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVAT 59
+ NI LI P + Q + ++G+ K++ + + G S+ +Q A L IVVAT
Sbjct: 69 YNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVAT 128
Query: 60 PGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQ 97
PGR L + +KL +++Y+V DEAD++F GF VEQ
Sbjct: 129 PGRILDHINRGSIKLENVKYLVIDEADKMFNKGF-VEQ 165
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 26 GKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEA 85
GK+T L+ T + GG Q +L DI++ATPGR L ++ + E++L S+ + V DEA
Sbjct: 124 GKYTGLRHTAIFGGVKQHPQTEKLRQGVDILIATPGRLLDLIGQDEVRLESLTHFVLDEA 183
Query: 86 DRLFEMGF 93
DR+ +MGF
Sbjct: 184 DRMLDMGF 191
>gi|421750240|ref|ZP_16187506.1| RNA helicase, partial [Cupriavidus necator HPC(L)]
gi|409770737|gb|EKN53283.1| RNA helicase, partial [Cupriavidus necator HPC(L)]
Length = 409
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V+ GK+ +L+S + GG + Q +L DIVVATPGR L V + +
Sbjct: 73 LAAQVEESVRNYGKYLRLRSMVMFGGVGIHPQIDQLKRGVDIVVATPGRLLDHVGQRTID 132
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS ++ +V DEADR+ +MGF
Sbjct: 133 LSHVEMLVLDEADRMLDMGF 152
>gi|301348040|ref|ZP_07228781.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB056]
gi|301596797|ref|ZP_07241805.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB059]
Length = 344
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ P+ +Q F+ K L KF+ L LLGG D Q
Sbjct: 62 INDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQ 121
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
+L A+ DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 122 KKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 170
>gi|73540602|ref|YP_295122.1| helicase [Ralstonia eutropha JMP134]
gi|72118015|gb|AAZ60278.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Ralstonia
eutropha JMP134]
Length = 537
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ Q + V K T L+ST + GG M+ Q L +I+VATPGR L V + +
Sbjct: 142 LADQVYDNVARYAKHTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQQKSVN 201
Query: 74 LSSIQYVVFDEADRLFEMGF 93
LS +Q +V DEADR+ +MGF
Sbjct: 202 LSQVQMLVLDEADRMLDMGF 221
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 9 LISFPIVQQTFKFVKELGKFTK---LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
+I P + T + KE KF+K L+ C+ GG + Q A L +I+V TPGR +
Sbjct: 449 VIMTPTRELTLQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 508
Query: 66 IVVEMELKLSSIQ---YVVFDEADRLFEMGFD 94
++ ++++++ YVV DEADR+F+MGF+
Sbjct: 509 MLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
>gi|304413058|ref|ZP_07394531.1| RNA helicase [Candidatus Regiella insecticola LSR1]
gi|304283901|gb|EFL92294.1| RNA helicase [Candidatus Regiella insecticola LSR1]
Length = 446
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK +F KL+S + GG S++ Q +L DI+VATPGR L + + + L+ I+ +V
Sbjct: 130 VKNYSEFLKLRSMVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNAVDLAKIEILV 189
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 190 LDEADRMLDMGF 201
>gi|301510878|ref|ZP_07236115.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB058]
Length = 344
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 6 INYLISFPIVQQTFKF--------------------VKELGKFTKLQSTCLLGGDSMDNQ 45
IN L++ P+ +Q F+ K L KF+ L LLGG D Q
Sbjct: 62 INDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQ 121
Query: 46 FARLHAS-PDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
+L A+ DI+VATPGR + V + E+ L I+++V DEADRL +MGF
Sbjct: 122 KKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGF 170
>gi|317132682|ref|YP_004091996.1| DEAD/DEAH box helicase [Ethanoligenens harbinense YUAN-3]
gi|315470661|gb|ADU27265.1| DEAD/DEAH box helicase domain protein [Ethanoligenens harbinense
YUAN-3]
Length = 435
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 24 ELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFD 83
+ +F L++T + GG S Q +RL DI+VATPGR L ++ + + LS + Y V D
Sbjct: 97 QYSRFLHLRNTVIFGGVSQIPQVSRLREGVDILVATPGRLLDLMNQRHVDLSHVSYFVLD 156
Query: 84 EADRLFEMGF 93
EADR+ +MGF
Sbjct: 157 EADRMLDMGF 166
>gi|345298444|ref|YP_004827802.1| DEAD/DEAH box helicase [Enterobacter asburiae LF7a]
gi|345092381|gb|AEN64017.1| DEAD/DEAH box helicase domain protein [Enterobacter asburiae LF7a]
Length = 459
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V+E ++ ++S + GG S++ Q +L D++VATPGR L + + +KL SI+ +V
Sbjct: 95 VREYSRYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDSIEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|334122768|ref|ZP_08496804.1| ATP-dependent RNA helicase RhlE [Enterobacter hormaechei ATCC
49162]
gi|333391883|gb|EGK62992.1| ATP-dependent RNA helicase RhlE [Enterobacter hormaechei ATCC
49162]
Length = 460
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
V+E ++ ++S + GG S++ Q +L D++VATPGR L + + +KL SI+ +V
Sbjct: 95 VREYSRYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDSIEILV 154
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 155 LDEADRMLDMGF 166
>gi|253687917|ref|YP_003017107.1| DEAD/DEAH box helicase domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754495|gb|ACT12571.1| DEAD/DEAH box helicase domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 477
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 22 VKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVV 81
VK K+ +L+S + GG S++ Q +L DI+VATPGR L + + + LS I+ +V
Sbjct: 97 VKAYSKYLRLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNAVDLSQIEILV 156
Query: 82 FDEADRLFEMGF 93
DEADR+ +MGF
Sbjct: 157 LDEADRMLDMGF 168
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,515,307,013
Number of Sequences: 23463169
Number of extensions: 51720450
Number of successful extensions: 152126
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19735
Number of HSP's successfully gapped in prelim test: 3943
Number of HSP's that attempted gapping in prelim test: 127657
Number of HSP's gapped (non-prelim): 23916
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)