BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18035
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2
Length = 881
Score = 124 bits (312), Expect = 1e-28, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 181 QTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQS 240
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 241 VEYVVFDEADRLFEMGFAEQLQ 262
>sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1
Length = 874
Score = 123 bits (309), Expect = 3e-28, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT KF KELGKFT L++ +LGGD M++QFA LH +PDI++ATPGR +H+ VEM LKL S
Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS 239
Query: 77 IQYVVFDEADRLFEMGFDVEQQ 98
++YVVFDEADRLFEMGF + Q
Sbjct: 240 VEYVVFDEADRLFEMGFAEQLQ 261
>sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10
PE=3 SV=1
Length = 934
Score = 117 bits (294), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QFA + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IRYVVFDEADRLFEMGF 251
>sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=dbp10 PE=3 SV=1
Length = 936
Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 176 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSS 235
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 236 IKYVVFDEADRLFEMGF 252
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 117 bits (292), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 174 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=dbp10 PE=3 SV=1
Length = 869
Score = 117 bits (292), Expect = 3e-26, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QFA + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 155 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLDLSS 214
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 215 IRYVVFDEADRLFEMGF 231
>sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp10 PE=3 SV=1
Length = 928
Score = 116 bits (291), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+S L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 174 QTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=DBP10 PE=3 SV=1
Length = 762
Score = 116 bits (290), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF + A+PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSS 230
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 231 VRYVVFDEADRLFEMGF 247
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 116 bits (290), Expect = 5e-26, Method: Composition-based stats.
Identities = 53/77 (68%), Positives = 64/77 (83%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L++ L+GGDS++ QF+ + +PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSS 234
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 235 IRYVVFDEADRLFEMGF 251
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 115 bits (288), Expect = 8e-26, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+S L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L LSS
Sbjct: 171 QTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSS 230
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 231 IRYVVFDEADRLFEMGFATQ 250
>sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-10 PE=3 SV=1
Length = 934
Score = 115 bits (288), Expect = 9e-26, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 65/80 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L++ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEM L L+S
Sbjct: 184 QTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLAS 243
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF E
Sbjct: 244 IKYVVFDEADRLFEMGFATE 263
>sp|A4R5B8|DBP10_MAGO7 ATP-dependent RNA helicase DBP10 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP10 PE=3 SV=1
Length = 914
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 64/80 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE GK T L++ L+GGDS+++QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 175 QTLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSS 234
Query: 77 IQYVVFDEADRLFEMGFDVE 96
I+YVVFDEADRLFEMGF +
Sbjct: 235 IKYVVFDEADRLFEMGFATQ 254
>sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain
RS) GN=DBP10 PE=3 SV=1
Length = 927
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELG+ T L+ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 166 QTLKVVKELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSS 225
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 226 IKYVVFDEADRLFEMGF 242
>sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp10 PE=3 SV=1
Length = 935
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKELGK T L+ L+GGDS++ QF + +PDIV+ATPGRFLH+ VEM L L S
Sbjct: 174 QTLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYS 233
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 234 IRYVVFDEADRLFEMGF 250
>sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=dbp10 PE=3 SV=2
Length = 920
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 173 QTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMSLDLSS 232
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 233 MKYVVFDEADRLFEMGF 249
>sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP10 PE=3 SV=2
Length = 932
Score = 112 bits (280), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTFK VKE K T L+S L+GGDS++ QF+ + +PD++VATPGRFLH+ VEMEL+
Sbjct: 179 LASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSMMTNPDVIVATPGRFLHLKVEMELE 238
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L +++Y+VFDEADRLFEMGF
Sbjct: 239 LKTVEYIVFDEADRLFEMGF 258
>sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP10 PE=3
SV=1
Length = 897
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE + T L+ L+GGDS++ QF + A+PDIV+ATPGRFLH+ VEM L LSS
Sbjct: 167 QTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSS 226
Query: 77 IQYVVFDEADRLFEMGF 93
I+YVVFDEADRLFEMGF
Sbjct: 227 IKYVVFDEADRLFEMGF 243
>sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP10 PE=3 SV=1
Length = 878
Score = 111 bits (277), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VKE G+ T L++ L+GGDS++ QF + +PDI++ATPGRFLH+ VEM L LSS
Sbjct: 163 QTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHLKVEMGLDLSS 222
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 223 VQYIVFDEADRLFEMGF 239
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP10 PE=3 SV=2
Length = 914
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 63/77 (81%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VKE K T L+S L+GGDS+++QF+ + +PDI+VATPGRFLH+ VEM L L +
Sbjct: 184 QTFKQVKEFTKGTDLRSIVLIGGDSLEDQFSSMMTNPDILVATPGRFLHLKVEMNLDLKT 243
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEADRLFEMGF
Sbjct: 244 VEYIVFDEADRLFEMGF 260
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
+N LI P + QT K VK+ K T L+S ++GG S++ QF+ L PDIVVATP
Sbjct: 138 SNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATP 197
Query: 61 GRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
GRFLH+ VEM+L+LSSI+YVVFDEADRLFEMGF
Sbjct: 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGF 230
>sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP10 PE=3 SV=1
Length = 948
Score = 105 bits (262), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T LQS L+GGDS++ F ++ PDI+V TPGRFLH+ VEM+ L S
Sbjct: 205 QTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMS 264
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 265 VQYIVFDEADRLFEMGF 281
>sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1
Length = 977
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 61/77 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + KE K T L+S L GGDS+++QF+ + ++PD++VATPGRFLH+ VEM L L +
Sbjct: 206 QTHRVFKEFSKGTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATPGRFLHLKVEMSLDLKT 265
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 266 VEYVVFDEADRLFEMGF 282
>sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DBP10 PE=1 SV=2
Length = 995
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DBP10 PE=3 SV=1
Length = 995
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QTF K+ + T+L+S L GGDS++ QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 219 LAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLD 278
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++YVVFDEADRLFEMGF
Sbjct: 279 LKSVEYVVFDEADRLFEMGF 298
>sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP10 PE=3 SV=1
Length = 908
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE T LQS L+GGDS++ F+++ PDI+V TPGRFLH+ VEM+ L +
Sbjct: 183 QTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYDLMT 242
Query: 77 IQYVVFDEADRLFEMGF 93
+QY+VFDEADRLFEMGF
Sbjct: 243 VQYIVFDEADRLFEMGF 259
>sp|Q757U8|DBP10_ASHGO ATP-dependent RNA helicase DBP10 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP10
PE=3 SV=1
Length = 960
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 61/80 (76%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT K KE K + L+S L GGD +++QF+ + ++PD+++ATPGRFLH+ VEM L
Sbjct: 202 LAMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRFLHLKVEMNLD 261
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L SI+YVVFDEADRLFEMGF
Sbjct: 262 LHSIEYVVFDEADRLFEMGF 281
>sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP10 PE=3 SV=1
Length = 973
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT + KE K + L+S L GGDS+++QF + +PD+V+ATPGRFLH+ VEM L L S
Sbjct: 211 QTHRVFKEFSKGSDLRSILLTGGDSLEDQFGMMMGNPDVVIATPGRFLHLKVEMNLDLKS 270
Query: 77 IQYVVFDEADRLFEMGF 93
++YVVFDEADRLFEMGF
Sbjct: 271 VEYVVFDEADRLFEMGF 287
>sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=DBP10 PE=3 SV=2
Length = 931
Score = 102 bits (254), Expect = 8e-22, Method: Composition-based stats.
Identities = 44/77 (57%), Positives = 62/77 (80%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT+K VKE K + L++ L GGDS+++QF+ + ++PDIV+ATPGRFLH+ VEM+L L +
Sbjct: 184 QTYKQVKEFSKGSDLRAIVLTGGDSLEDQFSSMVSNPDIVIATPGRFLHLQVEMQLDLKT 243
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+VFDEAD LFE GF
Sbjct: 244 VEYIVFDEADHLFEQGF 260
>sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP10 PE=3 SV=1
Length = 969
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/80 (55%), Positives = 58/80 (72%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QT KE + T L+S L GGDS+++QF + +PD+++ATPGRFLH+ VEM L
Sbjct: 197 LAMQTHSVFKEFSRGTHLRSVLLTGGDSLEDQFGMMMTNPDVIIATPGRFLHLKVEMNLD 256
Query: 74 LSSIQYVVFDEADRLFEMGF 93
L S++Y VFDEADRLFEMGF
Sbjct: 257 LKSVEYAVFDEADRLFEMGF 276
>sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis
thaliana GN=RH29 PE=3 SV=1
Length = 845
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEM-EL 72
+ +QT KF KELGKFT L+ + L+GGDSM++QF L PD+++ATPGR +H++ E+ ++
Sbjct: 110 LAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDM 169
Query: 73 KLSSIQYVVFDEADRLFEMGF 93
L +++YVVFDEAD LF MGF
Sbjct: 170 TLRTVEYVVFDEADSLFGMGF 190
>sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DBP10 PE=3 SV=1
Length = 926
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QT K VK+ T L+ L+GGDS++ QF + ++PDI++ATPGRFLH+ VEMEL L+S
Sbjct: 187 QTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATPGRFLHLKVEMELSLAS 246
Query: 77 IQYVVFDEADRLFEMGF 93
++Y+ FDEADRLFE+GF
Sbjct: 247 VEYICFDEADRLFELGF 263
>sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum
GN=helA PE=3 SV=1
Length = 1091
Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
QTFK VK+ + T+L++ ++GGDSM++QF L +PDI++ATPGR +H ++E + LS
Sbjct: 315 QTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMHHLLETGMSLSK 374
Query: 77 IQYVVFDEADRLFEMGFD 94
+QY+VFDEADRLFEMGF+
Sbjct: 375 VQYIVFDEADRLFEMGFN 392
>sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
japonica GN=Os08g0416100 PE=2 SV=2
Length = 851
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 211
>sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
indica GN=OsI_028228 PE=2 SV=2
Length = 851
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 4 ANINYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATP 60
A I LI P + QT KF ++LGKFT L+ + ++GGDSM++QF L +PDI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 61 GRFLHIVVEME-LKLSSIQYVVFDEADRLFEMGF 93
GR +H + E+E L L +++YVVFDEAD LF +G
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGL 211
>sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP10 PE=3 SV=1
Length = 802
Score = 95.9 bits (237), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q V++DEADRLFE
Sbjct: 151 LRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFE 210
Query: 91 MGFDVEQQ 98
MGFDV+ Q
Sbjct: 211 MGFDVQLQ 218
>sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP10 PE=3
SV=1
Length = 802
Score = 95.9 bits (237), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 31 LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFE 90
L+ ++GG+ MD QF ++ ++PDIV+ATPGRFLH++VEM + L +Q V++DEADRLFE
Sbjct: 151 LRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFE 210
Query: 91 MGFDVEQQ 98
MGFDV+ Q
Sbjct: 211 MGFDVQLQ 218
>sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP10 PE=3 SV=1
Length = 1154
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 36 LLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSSIQYVVFDEADRLFEMGF 93
++GG+S+D QF + +PD+V+ATPGR LH+ VEM L L S++YVVFDEADRLFEMGF
Sbjct: 264 IVGGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGF 321
>sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP5 PE=3 SV=2
Length = 913
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 9 LISFPIVQQTFKFVKELGKFTK---LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLH 65
LI P + + KEL FTK + S C GG S+++Q A L I+V TPGR +
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIID 453
Query: 66 IVVEMELKLSSIQ---YVVFDEADRLFEMGFD 94
++ +++++Q Y+V DEADR+F+MGF+
Sbjct: 454 LLAANSGRVTNLQRVTYLVLDEADRMFDMGFE 485
>sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3
Length = 929
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1
Length = 938
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2
SV=1
Length = 947
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 335 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 394
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 395 LQRVTYLVFDEADRMFDMGFEYQVRS 420
>sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus gallus GN=DDX42 PE=2
SV=1
Length = 944
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVTYLVFDEADRMFDMGFEYQVRS 423
>sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1
Length = 942
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
+ QQ K GK L+S + GG SM Q L +IVV TPGR + V +
Sbjct: 338 LCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQS 99
L + Y+VFDEADR+F+MGF+ + +S
Sbjct: 398 LQRVSYLVFDEADRMFDMGFEYQVRS 423
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 14 IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELK 73
I ++T KF K LG +++ ++GG S ++Q RL +IV+ATPGR + ++ L
Sbjct: 484 IEEETIKFGKPLG----IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV 539
Query: 74 LSSIQYVVFDEADRLFEMGFDVEQQ 98
LS YVV DEADR+ +MGF+ + Q
Sbjct: 540 LSRCTYVVLDEADRMIDMGFEPDVQ 564
>sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain YJM789) GN=PRP5 PE=3
SV=1
Length = 849
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP5 PE=1 SV=1
Length = 849
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 LISFPIVQQTFKFVKELGKFTK----LQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL 64
LI P + + +E+ KFT+ ++S C GG M Q L +IVVATPGRF+
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 65 HIVVEMELKLSS---IQYVVFDEADRLFEMGFD 94
I+ + KL S I +VV DEADRLF++GF+
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>sp|Q86B47|Y8611_DROME Probable ATP-dependent RNA helicase CG8611 OS=Drosophila
melanogaster GN=CG8611 PE=1 SV=1
Length = 975
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 14 IVQQTFKFVKELGK-FTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFL-HIVVEME 71
+V QT++ +++L K +T + LLGG+S ++ ARL +I++ TPGR + H++
Sbjct: 414 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS 473
Query: 72 LKLSSIQYVVFDEADRLFEMGF--DVEQ 97
KL+ +Q+++ DEADRL E+G+ DV+Q
Sbjct: 474 FKLTKLQFLILDEADRLLELGYERDVKQ 501
>sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana
GN=RH5 PE=1 SV=1
Length = 537
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q ++E G+ L+S C+ GG S Q + + + DIV+ TPGR ++ L+LS
Sbjct: 206 QISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSD 265
Query: 77 IQYVVFDEADRLFEMGFD 94
+ +VV DEADR+ +MGF+
Sbjct: 266 VSFVVLDEADRMLDMGFE 283
>sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP3 PE=3 SV=2
Length = 535
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 17 QTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGRFLHIVVEMELKLSS 76
Q + +++L + T + + GG S D+Q ++ ++VVATPGR + ++ + + LSS
Sbjct: 210 QIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSS 269
Query: 77 IQYVVFDEADRLFEMGFD 94
I Y+V DEADR+ E GF+
Sbjct: 270 INYLVLDEADRMLEKGFE 287
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 65.5 bits (158), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 INYLISFP---IVQQTFKFVKELGKFTKLQSTCLLGGDSMDNQFARLHASPDIVVATPGR 62
I LI P + Q +++L +FT ++ ++GG S Q L + PDIVVATPGR
Sbjct: 266 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 325
Query: 63 FL-HIVVEMELKLSSIQYVVFDEADRLFEMGFDVEQQ 98
+ H+ + + L + ++ DEADRL E+GF E Q
Sbjct: 326 IIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQ 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,418,179
Number of Sequences: 539616
Number of extensions: 1250712
Number of successful extensions: 4579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 3228
Number of HSP's gapped (non-prelim): 1158
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)