Query psy18037
Match_columns 1390
No_of_seqs 344 out of 1873
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 20:53:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_G T-complex protein 1 sub 100.0 2.4E-42 8.3E-47 423.3 31.5 264 127-395 137-422 (515)
2 3iyg_A T-complex protein 1 sub 100.0 1.3E-39 4.4E-44 400.3 30.4 263 127-395 139-429 (529)
3 1a6d_B Thermosome (beta subuni 100.0 2.7E-39 9.2E-44 398.6 30.1 263 127-395 149-432 (543)
4 3aq1_B Thermosome subunit; gro 100.0 1.1E-39 3.7E-44 398.5 24.1 264 127-395 101-385 (500)
5 3iyg_Z T-complex protein 1 sub 100.0 3.5E-39 1.2E-43 395.2 26.4 260 127-395 137-426 (517)
6 1q3q_A Thermosome alpha subuni 100.0 6.4E-39 2.2E-43 395.4 28.4 263 127-395 151-434 (548)
7 3ruv_A Chaperonin, CPN; double 100.0 1.5E-38 5E-43 391.8 30.7 261 127-395 147-427 (543)
8 3iyg_H T-complex protein 1 sub 100.0 1.4E-38 4.7E-43 389.8 30.1 258 127-395 143-423 (515)
9 3iyg_E T-complex protein 1 sub 100.0 2.8E-38 9.6E-43 387.6 31.3 262 127-395 140-423 (515)
10 1a6d_A Thermosome (alpha subun 100.0 1E-38 3.5E-43 393.3 27.5 263 127-395 148-431 (545)
11 3ko1_A Chaperonin; 9-fold symm 100.0 1.1E-38 3.8E-43 393.0 26.2 263 127-395 158-441 (553)
12 3iyg_B T-complex protein 1 sub 100.0 5.1E-38 1.7E-42 384.9 31.0 257 127-395 143-420 (513)
13 3p9d_C T-complex protein 1 sub 100.0 4.2E-39 1.4E-43 397.9 20.8 264 127-395 148-495 (590)
14 3iyg_D T-complex protein 1 sub 100.0 9.7E-38 3.3E-42 382.8 29.4 263 127-395 139-427 (518)
15 3p9d_G T-complex protein 1 sub 100.0 2.1E-38 7.2E-43 390.6 19.4 259 127-395 155-436 (550)
16 3p9d_E T-complex protein 1 sub 100.0 1.6E-37 5.3E-42 383.8 25.1 261 128-395 178-466 (562)
17 3p9d_F T-complex protein 1 sub 100.0 1.6E-38 5.3E-43 392.1 16.0 262 127-395 147-441 (546)
18 3iyg_Q T-complex protein 1 sub 100.0 6.9E-37 2.4E-41 375.0 30.1 259 127-395 141-419 (512)
19 3p9d_H T-complex protein 1 sub 100.0 6.6E-38 2.2E-42 387.6 21.2 261 127-395 156-446 (568)
20 3p9d_A T-complex protein 1 sub 100.0 1.1E-37 3.6E-42 385.0 22.7 263 127-395 153-445 (559)
21 1gml_A T-complex protein 1 sub 100.0 1.5E-37 5E-42 331.2 19.0 166 187-356 1-174 (178)
22 3p9d_D T-complex protein 1 sub 100.0 1E-37 3.5E-42 383.2 16.6 263 127-395 147-437 (528)
23 2ybx_A Phosphatidylinositol-5- 100.0 3.9E-36 1.3E-40 353.7 13.5 153 1182-1387 75-229 (394)
24 3p9d_B T-complex protein 1 sub 100.0 5.8E-36 2E-40 368.0 13.3 257 127-395 150-427 (527)
25 2gk9_A Phosphatidylinositol-4- 100.0 1.4E-35 4.9E-40 349.0 12.7 151 1182-1387 67-218 (392)
26 1ass_A Thermosome; chaperonin, 100.0 2E-32 6.9E-37 286.3 14.8 146 193-341 1-153 (159)
27 1kp8_A Groel protein; chaperon 99.9 8.8E-25 3E-29 268.5 21.7 214 146-394 152-435 (547)
28 1we3_A CPN60(groel); chaperoni 99.9 3.9E-24 1.3E-28 263.1 22.2 214 148-395 153-436 (543)
29 1iok_A Chaperonin 60; chaperon 99.9 5.5E-25 1.9E-29 270.5 11.6 209 146-388 153-431 (545)
30 3rtk_A 60 kDa chaperonin 2; he 99.9 3.1E-23 1.1E-27 254.3 17.6 219 128-387 141-428 (546)
31 2ybx_A Phosphatidylinositol-5- 94.9 0.0029 9.9E-08 74.9 -1.7 41 1208-1248 100-141 (394)
32 2gk9_A Phosphatidylinositol-4- 94.0 0.0069 2.4E-07 71.7 -1.3 39 1208-1248 92-130 (392)
33 3m6c_A 60 kDa chaperonin 1; ch 92.6 1 3.5E-05 47.9 12.6 115 191-323 3-140 (194)
34 1srv_A Protein (groel (HSP60 c 92.4 0.33 1.1E-05 49.3 8.3 102 205-324 18-135 (145)
35 3osx_A 60 kDa chaperonin; alph 90.6 5.5 0.00019 42.6 15.5 111 195-323 14-147 (201)
36 2aqx_A Predicted: inositol 1,4 88.5 0.39 1.3E-05 54.5 5.4 86 1253-1359 7-92 (289)
37 1w2f_A Inositol-trisphosphate 76.9 4 0.00014 46.0 7.4 78 1262-1359 2-79 (276)
38 2yx6_A Hypothetical protein PH 67.9 8.7 0.0003 37.4 6.6 54 248-302 54-107 (121)
39 1o13_A Probable NIFB protein; 67.4 9 0.00031 38.4 6.7 55 248-303 67-121 (136)
40 2iew_A Inositol polyphosphate 64.2 8.3 0.00028 45.1 6.5 92 1266-1359 14-133 (363)
41 1eo1_A Hypothetical protein MT 63.3 12 0.00041 36.6 6.6 54 248-302 56-109 (124)
42 2wfb_A Putative uncharacterize 60.5 11 0.00037 36.7 5.6 54 248-302 58-112 (120)
43 2a98_A Inositol 1,4,5-trisphos 55.8 17 0.00059 40.5 6.8 62 1279-1359 1-62 (259)
44 1rdu_A Conserved hypothetical 49.4 12 0.0004 36.1 3.8 52 249-301 54-105 (116)
45 2re2_A Uncharacterized protein 48.4 26 0.0009 35.0 6.3 52 248-301 70-121 (136)
46 2wi8_A Iron-uptake system-bind 47.1 25 0.00085 39.6 6.6 51 250-300 89-143 (311)
47 3psh_A Protein HI_1472; substr 45.6 25 0.00085 39.7 6.3 51 250-300 77-153 (326)
48 2r7a_A Bacterial heme binding 43.9 33 0.0011 37.2 6.7 51 250-300 52-111 (256)
49 2etv_A Iron(III) ABC transport 43.5 26 0.0009 40.1 6.2 51 250-300 89-150 (346)
50 1v3f_A Pleckstrin 2; three-hel 43.0 6.7 0.00023 38.7 0.9 16 1-16 61-76 (120)
51 3ml6_A Chimeric complex betwee 42.9 7.7 0.00026 45.8 1.5 44 2-46 64-109 (385)
52 2r79_A Periplasmic binding pro 42.4 38 0.0013 37.4 7.1 51 250-300 52-110 (283)
53 2q8p_A Iron-regulated surface 41.4 19 0.00065 39.1 4.3 51 250-300 53-109 (260)
54 3md9_A Hemin-binding periplasm 37.1 46 0.0016 36.0 6.5 51 250-300 52-110 (255)
55 1n2z_A Vitamin B12 transport p 35.8 34 0.0012 36.8 5.2 35 250-284 50-85 (245)
56 4hn9_A Iron complex transport 32.8 52 0.0018 37.3 6.3 50 250-300 109-164 (335)
57 2qtd_A Uncharacterized protein 31.9 71 0.0024 30.0 6.1 50 251-302 50-99 (105)
58 1uhw_A Pleckstrin; three-helix 31.1 14 0.00047 36.0 0.9 22 1-22 61-92 (109)
59 4frf_A Inositol polyphosphate 30.4 11 0.00036 42.5 -0.1 79 1265-1359 4-89 (275)
60 3gfv_A Uncharacterized ABC tra 28.9 52 0.0018 36.6 5.3 50 250-300 88-145 (303)
61 2cso_A Pleckstrin; DEP domain, 28.1 16 0.00056 36.4 0.9 22 1-22 71-102 (127)
62 3ts3_A Capsid polyprotein; vir 26.4 20 0.0007 36.8 1.2 24 1262-1285 145-168 (208)
63 2chu_A CEUE, enterochelin upta 26.3 63 0.0021 35.8 5.4 50 250-300 88-145 (296)
64 3gx8_A Monothiol glutaredoxin- 25.5 1.3E+02 0.0044 29.1 6.8 61 246-306 5-78 (121)
65 3tny_A YFIY (ABC transport sys 24.7 43 0.0015 37.3 3.6 51 250-300 89-143 (303)
66 2ysr_A DEP domain-containing p 23.0 20 0.00069 34.5 0.4 16 2-17 72-87 (105)
67 3lhs_A Ferrichrome ABC transpo 22.2 84 0.0029 34.6 5.4 51 250-300 78-135 (296)
68 3r5t_A Ferric vibriobactin ABC 21.9 84 0.0029 35.0 5.4 51 250-300 79-136 (305)
69 2wul_A Glutaredoxin related pr 21.0 1.3E+02 0.0043 29.5 5.7 60 247-306 10-80 (118)
No 1
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.4e-42 Score=423.25 Aligned_cols=264 Identities=26% Similarity=0.460 Sum_probs=248.3
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCC-CCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQN-IDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~-~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|.+|.+. .|.+.+++++++|+..|.++.+ ..++|+++||+|+|++||++.||++|+|++|+|.+.|+
T Consensus 137 ~~~l~~va~tsl~sK~i~-~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~ 215 (515)
T 3iyg_G 137 RDTMLNIINSSITTKVIS-RWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 215 (515)
T ss_pred HHHHHHHHHHHhcCCchh-hHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCC
Confidence 578899999999999997 9999999999999999985533 34589988999999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
+||++++||||+|++|||||++++.+ ..++++++++|++|++++|++|++.||+|||++++|+++|++||.++
T Consensus 216 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~ 295 (515)
T 3iyg_G 216 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA 295 (515)
T ss_pred CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC
Confidence 99999999999999999999998863 34588999999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccc-cceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGT-CSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKE 357 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~-c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~ 357 (1390)
||++++++++.+|+|||++|||.|+++++ .+++..||+ |+.|+++++ ++++|+||+||+ ...+|||+|||+|+.+
T Consensus 296 ~I~av~~~~k~~leria~~tGa~ii~~l~-~l~~~~LG~~a~~v~~~~~--g~~~~~~i~g~~-~~~~~TIllrG~t~~~ 371 (515)
T 3iyg_G 296 NITAIRRVRKTDNNRIARACGARIVSRPE-ELREEDVGTGAGLLEIKKI--GDEYFTFITECK-DPKACTILLRGASKEI 371 (515)
T ss_pred CceeeccCCHHHHHHHHHHhCCeeecccc-ccChhhcCCcccEEEEEEE--CCceEEEEeCCC-CCCeEEEEEcCCCHHH
Confidence 99999999999999999999999999999 799999999 999999999 899999999999 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 358 LMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 358 L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+|+||+++||++++++ .+++++..+++++..++|+++
T Consensus 372 l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq 422 (515)
T 3iyg_G 372 LSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ 422 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH
Confidence 99999999999999998 699999999999988888776
No 2
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-39 Score=400.30 Aligned_cols=263 Identities=15% Similarity=0.228 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCC-C-CCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQ-N-IDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSH 204 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~-~-~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ah 204 (1390)
++.+.++++++|++|.++ .|.+.|++++++|+..|.+.. + ...+|++ +|+|++++||++.||++|+|++|+|.+.|
T Consensus 139 ~e~l~~va~tsl~sK~~~-~~~~~i~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k~~G~~~~ds~lv~G~v~dk~~~~ 216 (529)
T 3iyg_A 139 RDCLINAAKTSMSSKVIG-INGDFFANLVVDAVLAIKYTDIRGQPRYPVN-SINVLKAHGRSQMESMLINGYALNCVVGS 216 (529)
T ss_pred HHHHHHHHHHHhccCccc-ccHHHHHHHHHHHHHHHhhhccCCCcccccc-eEEEEEecCCCccceEEEeeeEEecCccc
Confidence 568899999999999987 999999999999999997422 1 2468886 49999999999999999999999999999
Q ss_pred CCCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHH
Q psy18037 205 KSMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQ 277 (1390)
Q Consensus 205 k~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~ 277 (1390)
+.||++++||||+|++|||||++++.+ ..+++.+.++|++|++.++++|++.|+||||++++|+++|++||.+
T Consensus 217 ~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~ 296 (529)
T 3iyg_A 217 QGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVE 296 (529)
T ss_pred ccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999998763 2368899999999999999999999999999999999999999999
Q ss_pred cCCEEEEccChhHHHHHHHHhCCeEeeeccccc------CCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEe
Q psy18037 278 LGITLVLNVKTTVLERIARCTRADLVYSVDVLL------NQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILR 351 (1390)
Q Consensus 278 ~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l------~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLR 351 (1390)
+||++++++++.+|+|||++|||.|+++++ .+ ++.+||+|+.|+++++ +.++|+||+||+ ...+|||+||
T Consensus 297 ~gI~av~~v~k~~leria~~tGa~iv~~~~-~l~~~e~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~TI~lr 372 (529)
T 3iyg_A 297 AGAMAVRRVLKRDLKRIAKASGATVLSTLA-NLEGEETFEASMLGQAEEVVQERI--CDDELILIKNTK-ARTSASVILR 372 (529)
T ss_pred cCCceeccCCHHHHHHHHHHhCCeeecchh-cccchhccChhhCccceEEEEEEe--CCceEEEEEcCC-CCceEEEEEC
Confidence 999999999999999999999999999997 44 3678999999999999 999999999999 5779999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 352 GASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 352 G~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+++.+|+|+||+++||++++++ .+++++..+++++..++|+++
T Consensus 373 G~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq 429 (529)
T 3iyg_A 373 GANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 429 (529)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHH
Confidence 99999999999999999999998 699999999999988888776
No 3
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.7e-39 Score=398.61 Aligned_cols=263 Identities=22% Similarity=0.341 Sum_probs=246.5
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCC-CCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~-~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|++|..+ .|.+.|++++++|+..|.++..+ ..+|+ ++|+|+|++||++.||++|+|++|+|.+.|+
T Consensus 149 ~~~l~~va~tsl~sKi~~-~~~~~i~~livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 226 (543)
T 1a6d_B 149 KALLLKMAQTSLNSKSAS-VAKDKLAEISYEAVKSVAELRDGKYYVDF-DNIQVVKKQGGAIDDTQLINGIIVDKEKVHP 226 (543)
T ss_dssp HHHHHHHHHHHHTTSGGG-GGHHHHHHHHHHHHHHHEEECSSSEEECG-GGEEEEEEESSCGGGCEEESEEEESCCCSST
T ss_pred HHHHHHHHHHHhcccccc-ccHHHHHHHHHHHHHHhcccccCCccccc-ceEEEEEecCCCccceeEEccEEEecCCCCC
Confidence 678899999999999986 89999999999999999865222 36888 4799999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
.||++++||||+|++|+|||++++.+ ..+++.++++|++|++.++++|++.|++|||++++|++.|++||.++
T Consensus 227 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~ 306 (543)
T 1a6d_B 227 GMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA 306 (543)
T ss_dssp TSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT
T ss_pred CCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC
Confidence 99999999999999999999998853 45789999999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||++++++++.+|+|||++|||.|+++++ .+++.+||+|+.|+++++ +.++|+||+||+ ...+|||+|||+++.+|
T Consensus 307 ~I~av~~v~k~~le~ia~~tGa~iis~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~TI~lrG~t~~~l 382 (543)
T 1a6d_B 307 GIYAVRRVKKSDMDKLAKATGASIVSTID-EISSSDLGTAERVEQVKV--GEDYMTFVTGCK-NPKAVSILVRGETEHVV 382 (543)
T ss_dssp TCEEECSCCHHHHHHHHHHHTCCEESCGG-GCCGGGCEEEEEEEEEEE--TTEEEEEEEEES-SSSCEEEEEEESSHHHH
T ss_pred CeeEeccCCHHHHHHHHHHhCCceecccc-cCCHHHCCCceEEEEEEe--cCceEEEEecCC-CCceEEEEecCCCHHHH
Confidence 99999999999999999999999999999 799999999999999999 999999999999 47899999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 383 ~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q 432 (543)
T 1a6d_B 383 DEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQ 432 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHH
Confidence 9999999999999998 699999999999987777665
No 4
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.1e-39 Score=398.52 Aligned_cols=264 Identities=22% Similarity=0.361 Sum_probs=231.3
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCC-CCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~-~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|++|..+ .|.+.|++++++|+..|.++.++ .++|+.+||+|+|++||++.||++|+|++|+|.+.|+
T Consensus 101 ~~~l~~va~tsl~sKi~~-~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 179 (500)
T 3aq1_B 101 EAALIKIAGTAITGKGAE-AYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHP 179 (500)
T ss_dssp HHHHHHHHHTTCCSSSTT-SSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSST
T ss_pred HHHHHHHHHHHhhccccc-ccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCC
Confidence 568899999999999886 89999999999999999755222 3588557899999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
.||++++||||+|++|+|||++++.+ ..+++.++++|++|++.++++|++.|++|||++++|++.|++||.++
T Consensus 180 ~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~ 259 (500)
T 3aq1_B 180 NMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKA 259 (500)
T ss_dssp TSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHT
T ss_pred CCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHC
Confidence 99999999999999999999998753 45688999999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||++++++++.+|+|||++|||.++++++ .+++..||+|+.|+++++ +.++|+||+||+ ...+|||+|||+++.+|
T Consensus 260 ~I~av~~~~k~~le~ia~~tGa~iis~l~-~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~TI~lrG~t~~~l 335 (500)
T 3aq1_B 260 GIYAVRRVKKSDLKRLSKVTGATIIQDLD-QITTEDVGTAGLVEEKEV--RGGKMTYVTGCQ-NSKAVTVLLHGGTEHVV 335 (500)
T ss_dssp TCEEECSCCHHHHHHHHHHHCCCCBSCTT-CCCSTTCEEEEEEEEEEC--SSSEEEEEEEET-TCCCEEEEEEESSHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHhCCeEecccc-cCCHhHCCCceEEEEEEe--cCeEEEEEECCC-CCceEEEEecCCcHHHH
Confidence 99999999999999999999999999999 799999999999999999 999999999999 47799999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 336 ~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 385 (500)
T 3aq1_B 336 DSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ 385 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH
Confidence 9999999999999998 699999999999887777655
No 5
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.5e-39 Score=395.24 Aligned_cols=260 Identities=18% Similarity=0.274 Sum_probs=242.4
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|.+|... .|.+.|++++++|+..|.+. +..+|++ +|+|+|++||...||++|+|++|+|++.|+.
T Consensus 137 ~~~L~~va~tsl~sKi~~-~~~d~la~l~vdaV~~V~~~--~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~ 212 (517)
T 3iyg_Z 137 RETLIDVARTSLRTKVHA-ELADVLTEAVVDSILAIKKQ--DEPIDLF-MVEIMEMKHKSETDTSLIRGLVLDHGARHPD 212 (517)
T ss_pred HHHHHHHHHHHhccccch-hHHHHHHHHHHHHhheeccC--CCcCChh-HheeeeecCCCccccceEeeEEEeccCCCCC
Confidence 578899999999999765 89999999999999998753 3468885 7999999999999999999999999999999
Q ss_pred CcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCC---------EEEecCCccHH
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPD---------IVLVQRNVARL 270 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pn---------VVlv~k~Vs~~ 270 (1390)
||++++||||+|++|+|||++++.+ ..+++.++++|++|+++.|++|+.++++ |||++++|+++
T Consensus 213 m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~ 292 (517)
T 3iyg_Z 213 MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPF 292 (517)
T ss_pred ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHH
Confidence 9999999999999999999998864 3479999999999999999999999887 59999999999
Q ss_pred HHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCcc-ccccceEEEEEEecCCcEEEEEecCCCCCCeEEEE
Q psy18037 271 AQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIH-LGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVI 349 (1390)
Q Consensus 271 A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~-LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIl 349 (1390)
|++||.++||++++++++.+|+|||++|||.|+++++ .+++.. ||+|+ |+++++ +.++|+||+||+ ...+|||+
T Consensus 293 al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~-~l~~~~~LG~a~-v~e~~i--g~~~~~~~~g~~-~~~~~TI~ 367 (517)
T 3iyg_Z 293 SLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLD-DLNPDCLLGHAG-VYEYTL--GEEKFTFIEKCN-NPRSVTLL 367 (517)
T ss_pred HHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchh-hCcccccCCcce-EEEEEE--cCceEEEEeCCC-Cchhheee
Confidence 9999999999999999999999999999999999999 789898 99999 999999 999999999999 57899999
Q ss_pred EecCCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 350 LRGASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 350 LRG~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|||+|+.+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 368 lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 426 (517)
T 3iyg_Z 368 IKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQ 426 (517)
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHH
Confidence 9999999999999999999999998 799999999999887777665
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=6.4e-39 Score=395.40 Aligned_cols=263 Identities=25% Similarity=0.373 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCC-CCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~-~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|++|..+ .|.+.|++++++|+..|.++..+ ..+|+ ++|+|+|++||++.||++|+|++|+|.+.|+
T Consensus 151 ~~~l~~va~tsl~sKi~~-~~~~~i~~livdAv~~V~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 228 (548)
T 1q3q_A 151 EETLLKIAATSITGKNAE-SHKELLAKLAVEAVKQVAEKKDGKYVVDL-DNIKFEKKAGEGVEESELVRGVVIDKEVVHP 228 (548)
T ss_dssp HHHHHHHHHHHSCSSTTG-GGHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEEEEBSCGGGCEEESSEEESCCCSST
T ss_pred HHHHHHHHHHHhhccccc-cchHHHHHHHHHHHHHhccccCCCccccC-CeEEEEEecCCCccceEEEeeEEEeccCCCC
Confidence 578899999999999886 89999999999999999865322 46887 4799999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
.||++++||||+|++|+|||++++.+ ..+++.++++|++|++.++++|++.|++|||++++|++.|++||.++
T Consensus 229 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~ 308 (548)
T 1q3q_A 229 RMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKY 308 (548)
T ss_dssp TSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHT
T ss_pred CCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHC
Confidence 99999999999999999999998863 35688899999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||++++++++.+|+|||++|||.|+++++ .+++..||+|+.|++.++ +.++|+||+||+ ...+|||+|||+++.+|
T Consensus 309 ~I~av~~~~k~~le~ia~~tGa~ii~~l~-~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~TI~lrG~te~~l 384 (548)
T 1q3q_A 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVK-DLTPEDLGYAEVVEERKL--AGENMIFVEGCK-NPKAVTILIRGGTEHVI 384 (548)
T ss_dssp TCEEECSCCHHHHHHHHHHHCCCCBSSGG-GCCGGGCEEESEEEEEEE--TTEEEEEEECCS-SCSSEEEEEEESSHHHH
T ss_pred CcEEEccCCHHHHHHHHHHhCCeEecccc-cCCHHHCCCceEEEEEEe--cCceEEEEecCC-CCCeEEEEECCCChHHH
Confidence 99999999999999999999999999999 799999999999999999 999999999999 47899999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 385 ~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q 434 (548)
T 1q3q_A 385 DEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEA 434 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHH
Confidence 9999999999999998 699999999999877666655
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.5e-38 Score=391.82 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=245.4
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.++ .|.+.|++++++|+..|.++ + +.+|++ +|+|++++||+..||++|+|++|+|.+.|+.
T Consensus 147 ~~~L~~va~tsl~sK~~~-~~~~~i~~livdAv~~V~~~-~-g~~dl~-~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~ 222 (543)
T 3ruv_A 147 KEILTKIAMTSITGKGAE-KAKEKLAEIIVEAVSAVVDD-E-GKVDKD-LIKIEKKSGASIDDTELIKGVLVDKERVSAQ 222 (543)
T ss_dssp HHHHHHHHHHHHHHTCGG-GCCHHHHHHHHHHHHHHCCT-T-SCCCGG-GEEEEEEECSCGGGCEEESSEEESCCCSCTT
T ss_pred HHHHHHHHHHHhcccccc-hhHHHHHHHHHHHHHHhhcc-C-CCcccc-eEEEEEcCCCCcccceeecceEEeccccCcc
Confidence 678899999999999997 89999999999999999865 2 348986 6999999999999999999999999999999
Q ss_pred CcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHcC
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLG 279 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~G 279 (1390)
||++++||||+|++|+|+|++++.+ ..++++++++|++|++.++++|++.|+||||++++|++.|++||.++|
T Consensus 223 m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g 302 (543)
T 3ruv_A 223 MPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG 302 (543)
T ss_dssp SCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT
T ss_pred ccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC
Confidence 9999999999999999999988752 356889999999999999999999999999999999999999999999
Q ss_pred CEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHHH
Q psy18037 280 ITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELM 359 (1390)
Q Consensus 280 I~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L~ 359 (1390)
|+++++|++.+|+|||++|||.|+++++ .++..+||+|+.|+++++ +.++++||+||+ ...+|||+|||+|+.+|+
T Consensus 303 I~~v~~v~k~~le~ia~~tGa~iis~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~i~g~~-~~~~~TI~lrG~te~~l~ 378 (543)
T 3ruv_A 303 IVAARRVKKSDMEKLAKATGANVIAAIA-ALSAQDLGDAGLVEERKI--SGDSMIFVEECK-HPKAVTMLIRGTTEHVIE 378 (543)
T ss_dssp CEEECSCCHHHHHHHHHHHCCCEESCGG-GCCGGGCEEEEEEEEEEE--TTEEEEEEECCS-SCSSEEEEEEESSHHHHH
T ss_pred cEEEeeCCHHHHHHHHHHhCCceecccc-cCCHHHCCcccEEEEEEe--CCceEEEEECCC-CCceeEEEecCCCHHHHH
Confidence 9999999999999999999999999999 799999999999999999 999999999999 478999999999999999
Q ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 360 KVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 360 evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 379 E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 427 (543)
T 3ruv_A 379 EVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQ 427 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHH
Confidence 999999999999998 699999999999988777765
No 8
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-38 Score=389.81 Aligned_cols=258 Identities=20% Similarity=0.297 Sum_probs=241.4
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.|.++++++|++|.++ .|.+.|++++++|+..|. +++|+. +|+|++++||+..||++|+|++|+|.+.|+.
T Consensus 143 ~~~L~~va~tsl~sK~~s-~~~~~i~~livdAv~~V~-----~~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~ 215 (515)
T 3iyg_H 143 RKLLEKCAMTALSSKLIS-QQKAFFAKMVVDAVMMLD-----DLLQLK-MIGIKKVQGGALEESQLVAGVAFKKTFSYAG 215 (515)
T ss_pred HHHHHHHHHHHhcCCccc-ccHHHHHHHHHHHHHHhc-----ccCCcc-eEEEEecCCCCccceEEEeeeEEecCccCcc
Confidence 567789999999999997 899999999999999985 357774 7999999999999999999999999999986
Q ss_pred C---cceecCCcEEEEEeeeeccccccc----c---cchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHH
Q psy18037 207 M---LTALNNPKILILQCAIVYQRVEGK----L---LSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQ 276 (1390)
Q Consensus 207 M---~~~i~nprIlLL~~~Ley~r~e~k----~---~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~ 276 (1390)
| |++++||||||++|||||++++.+ + .++++++++|++||..++++|++.|++|||++++|+++|++||.
T Consensus 216 ~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~ 295 (515)
T 3iyg_H 216 FEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFA 295 (515)
T ss_pred cccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHH
Confidence 4 899999999999999999998863 2 46888999999999999999999999999999999999999999
Q ss_pred HcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHH
Q psy18037 277 QLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRK 356 (1390)
Q Consensus 277 ~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~ 356 (1390)
++||++++++++.+|+|||++|||.|+++++ .+++..||+|+.|++.++ +.+++++|+||. ...+|||+|||+|+.
T Consensus 296 ~~gI~~v~~~~k~~leria~~tGa~ii~~l~-~~~~~~LG~a~~v~~~~i--g~~~~~~i~g~~-~~~~~tI~lrG~t~~ 371 (515)
T 3iyg_H 296 DRDMFCAGRVPEEDLKRTMMACGGSIQTSVN-ALSSDVLGRCQVFEETQI--GGERYNFFTGCP-KAKTCTIILRGGAEQ 371 (515)
T ss_pred HcCCcccccccHHHHHHHHHHhCCEEeeccc-cCCHHHCCcccEEEEEEE--cCeEEEEEecCC-CCceEEEEEeCCcHH
Confidence 9999999999999999999999999999999 789999999999999999 999999999999 477999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 357 ELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 357 ~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 372 ~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 423 (515)
T 3iyg_H 372 FMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ 423 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH
Confidence 999999999999999998 689999999999888777766
No 9
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-38 Score=387.57 Aligned_cols=262 Identities=18% Similarity=0.240 Sum_probs=242.8
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.+. .|.+.|++++++|+..|.+. ++.++|+ ++|+|+|++||++.||++|+|++|+|.+.|+.
T Consensus 140 ~~~l~~vA~tsl~sK~i~-~~~~~l~~l~~dav~~V~~~-~~~~~d~-~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~ 216 (515)
T 3iyg_E 140 TEPLIQTAKTTLGSKVVN-SCHRQMAEIAVNAVLTVADM-QRRDVDF-ELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQ 216 (515)
T ss_pred HHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHhhccc-ccCCCCc-ccEEEEEecCCCcccceEEeeEEEeccccccc
Confidence 467899999999999887 79999999999999999753 2346888 47999999999999999999999999999999
Q ss_pred CcceecCCcEEEEEeeeecccccc----cc---cchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHcC
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEG----KL---LSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLG 279 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~----k~---~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~G 279 (1390)
||+.++||||++++|||++.+++. ++ .+++.++++|++||..++++|++.|++|||++++|++.|++||.++|
T Consensus 217 m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~ 296 (515)
T 3iyg_E 217 MPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND 296 (515)
T ss_pred ccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC
Confidence 999999999999999999998764 23 45788999999999999999999999999999999999999999999
Q ss_pred CEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCC--cEEEEEecCCCCCCeEEEEEecCCHHH
Q psy18037 280 ITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSN--KTLMFFEGCAFPHKGSTVILRGASRKE 357 (1390)
Q Consensus 280 I~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~--kt~i~fegc~~~~~g~TIlLRG~s~~~ 357 (1390)
|++++++++.+|+|||++|||.++++++ .+++..||+|+.|+++++ ++ ++++||+||+ ...+|||+|||+|+.+
T Consensus 297 I~~v~~v~k~~le~ia~~tGa~ii~~l~-~l~~~~LG~a~~v~~~~i--g~~k~~~~~~~g~~-~~~~~tI~lrG~te~~ 372 (515)
T 3iyg_E 297 LPAVRWVGGPEIELIAIATGGRIVPRFS-ELTAEKLGFAGLVKEISF--GTTKDKMLVIEQCK-NSRAVTIFIRGGNKMI 372 (515)
T ss_pred CEEEeccCHHHHHHHHHHhCCEEecccc-cCCHHHCCcceEEEEEEe--ccccceEEEEEcCC-CCceEEEEEeCCcHHH
Confidence 9999999999999999999999999999 789999999999999999 76 7999999999 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 358 LMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 358 L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 373 l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 423 (515)
T 3iyg_E 373 IEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQ 423 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 99999999999999998 699999999999887777665
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1e-38 Score=393.34 Aligned_cols=263 Identities=23% Similarity=0.346 Sum_probs=245.8
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCC-CCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~-~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|++|..+ .|.+.|++|+++|+..|.++..+ ..+|+ ++|+|+|++||++.||++|+|++|+|.+.|+
T Consensus 148 ~~~l~~va~tsl~sKi~~-~~~~~i~~livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 225 (545)
T 1a6d_A 148 DATLRKIALTALSGKNTG-LSNDFLADLVVKAVNAVAEVRDGKTIVDT-ANIKVDKKNGGSVNDTQFISGIVIDKEKVHS 225 (545)
T ss_dssp HHHHHHHHHHHTTTSSCC-STHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEECCCSCSTTCEEESEEEESCCCSCT
T ss_pred HHHHHHHHHHHHhccccc-ccHHHHHHHHHHHHHHHhcccCCCccccc-ceEEEEEecCCCceeeEEEeeEEEeccCCCC
Confidence 578899999999999987 89999999999999999865322 36888 4799999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
.||++++||||||++|+|||++++.+ ..+++.++++|++|++.++++|++.|++|||++++|++.|++||.++
T Consensus 226 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~ 305 (545)
T 1a6d_A 226 KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE 305 (545)
T ss_dssp TSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHH
T ss_pred CCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC
Confidence 99999999999999999999998753 45789999999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||++++++++.+|+|||++|||.|+++++ .+++..||+|+.|++.++ +.++|+||+||+ ....|||+|||+++.+|
T Consensus 306 ~I~av~~~~k~~le~ia~~tGa~iis~l~-~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~TI~lrG~te~~l 381 (545)
T 1a6d_A 306 GIYAVRRVKKSDMEKLAKATGAKIVTDLD-DLTPSVLGEAETVEERKI--GDDRMTFVMGCK-NPKAVSILIRGGTDHVV 381 (545)
T ss_dssp TCEEECSCCHHHHHHHHHHHCCCEESSGG-GCCGGGCEEEEEEEEEEE--TTEEEEEEEEES-CSSCEEEEECCSSSTTH
T ss_pred CeeEeccCCHHHHHHHHHHhCCeeecccc-cCCHHHCCCceEEEEEEe--cCceEEEEecCC-CCceEEEEEcCCCHHHH
Confidence 99999999999999999999999999999 799999999999999999 999999999999 57899999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 382 ~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 431 (545)
T 1a6d_A 382 SEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQ 431 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHH
Confidence 9999999999999998 699999999999877666554
No 11
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.1e-38 Score=393.02 Aligned_cols=263 Identities=22% Similarity=0.316 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCC-CCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~-~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk 205 (1390)
++.+.++++++|++|.++ .|.+.|++|+++|+..|.++..+ ..+|++ +|+|++++||+..||++|+|++|+|.+.|+
T Consensus 158 ~e~L~~vA~tsl~sK~~~-~~~~~i~~livdAv~~V~~~~~G~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~ 235 (553)
T 3ko1_A 158 TDLLRKIAMTSLSSKAVA-GAREYIADIVVKAVTQVAELRGDKWYVDLD-NIQIVKKAGGSINDTQLVYGIVVDKEVVHP 235 (553)
T ss_dssp HHHHHHHHHHHHTTSSCC-TTHHHHHHHHHHHHHHHCCCTTSSCCCCGG-GEEEEECCCSCGGGCEEESEEEECSCBSCT
T ss_pred HHHHHHHHHHHhhHHhhh-hHHHHHHHHHHHHHHHHHHhcCCceEEech-hHHHHHHhCCccccceeeEEEEecccccCC
Confidence 568899999999999997 89999999999999999865322 258986 599999999999999999999999999999
Q ss_pred CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
.||++++||||+|++|+|+|++++.+ ..++++++++|++|++.++++|++.|+||||++++|++.|++||.++
T Consensus 236 ~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~ 315 (553)
T 3ko1_A 236 GMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK 315 (553)
T ss_dssp TSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH
T ss_pred CCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc
Confidence 99999999999999999999988752 34588899999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||+++++|++.+|+|||++|||.|+++++ .+++.+||+|+.|+++++ +.++++||+||+ ...+|||+|||+|+.+|
T Consensus 316 gI~~v~~v~k~~leria~~tGa~ivs~l~-~l~~~~LG~a~~v~~~~i--g~d~~~~i~g~~-~~~~~TI~lrG~te~~l 391 (553)
T 3ko1_A 316 GVLAVRRAKKSDLEKLARATGGRVVSNID-EISEQDLGYASLIEERKV--GEDKMVFVEGAK-NPKSISILIRGGLERLV 391 (553)
T ss_dssp TCEEECCCCHHHHHHHHTTTTCCEESCGG-GCCSSSSEECSEEECCCC--SSSCCEEEESCS-SSSCEEEEECCSSTTHH
T ss_pred chhhhhhhhhhhHHHHHHhhCCeeecccc-cCChhhcchHHHHHHhhc--CcceEEEeccCC-CCceEEEeeeccHHHHH
Confidence 99999999999999999999999999999 799999999999999999 899999999999 57899999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 392 ~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 441 (553)
T 3ko1_A 392 DETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQ 441 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhH
Confidence 9999999999999998 699999999999988777766
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.1e-38 Score=384.89 Aligned_cols=257 Identities=18% Similarity=0.248 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.++ .|.+.|++++++|+..|.++ +|+. +|+|++++||+..||++|+|++|+|.+.|.
T Consensus 143 ~~~l~~va~tslssK~~~-~~~~~i~~livdAv~~V~~~-----~d~~-~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~- 214 (513)
T 3iyg_B 143 RQDLMNIAGTTLSSKLLT-HHKDHFTKLAVEAVLRLKGS-----GNLE-AIHVIKKLGGSLADSYLDEGFLLDKKIGVN- 214 (513)
T ss_pred HHHHHHHHHhhhcccccc-cchHHHHHHHHHHHHHhccc-----CCcC-eEEEEEeCCCCccceeEEeeEEEeccccCC-
Confidence 567889999999999987 89999999999999998753 7774 699999999999999999999999999988
Q ss_pred CcceecCCcEEEEEeeeeccccc-c----c---ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 207 MLTALNNPKILILQCAIVYQRVE-G----K---LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e-~----k---~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
||++++||||+|++|||||++++ . + ..++.+++++|++|+++++++|++.|++|||++++|++.|++||.++
T Consensus 215 m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~ 294 (513)
T 3iyg_B 215 QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA 294 (513)
T ss_pred CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc
Confidence 99999999999999999999977 2 2 34578889999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||+++++++..+|+|||++|||.++++++ .+++..||+|+.|++..+ ++++|++|+||+ ...+|||+|||+|+.+|
T Consensus 295 ~I~av~~~~~~~le~ia~~tGa~ii~~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~tI~lrG~t~~~l 370 (513)
T 3iyg_B 295 GVMAIEHADFVGVERLALVTGGEIASTFD-HPELVKLGSCKLIEEVMI--GEDKLIHFSGVA-LGEACTIVLRGATQQIL 370 (513)
T ss_pred CceEEecCCHHHHHHHHHHhCCEEecccc-cCCHhHCCcccEEEEEEE--CCeEEEEEecCC-CCceEEEEecCCCHHHH
Confidence 99999999999999999999999999999 789999999999999999 999999999999 46799999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 371 ~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 420 (513)
T 3iyg_B 371 DEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEA 420 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHH
Confidence 9999999999999998 689999999999887777765
No 13
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=4.2e-39 Score=397.89 Aligned_cols=264 Identities=27% Similarity=0.457 Sum_probs=240.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCC-C------CCCCcccceEEEEecCCCCCcceeEEeEEEe
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQN-I------DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHS 199 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~-~------~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~ 199 (1390)
++.+.++++++|++|.++ .|.+.|++|+++|+..|.++.. + .++|+++||+|+|++||++.||++|+|++|+
T Consensus 148 ~e~L~~vA~tslsSK~~~-~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfd 226 (590)
T 3p9d_C 148 DAAMKKLIQASIGTKYVI-HWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLN 226 (590)
T ss_dssp THHHHHHHTTTSTTSTTG-GGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEEC
T ss_pred HHHHHHHHHHHHhccccc-ccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEe
Confidence 467888999999999986 8999999999999999987632 1 1588888999999999999999999999999
Q ss_pred eccCCCCCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHH
Q psy18037 200 KNVSHKSMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQ 272 (1390)
Q Consensus 200 Kn~ahk~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~ 272 (1390)
|.+.|++||++++||||||++|+|||++++.+ ..++++++++|++|++++|++|++.||+|||++++|+++|+
T Consensus 227 k~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al 306 (590)
T 3p9d_C 227 KDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQ 306 (590)
T ss_dssp CCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHH
T ss_pred cccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHH
Confidence 99999999999999999999999999998752 45689999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccc-cceEEEEEEecCCcEEEEEecCCCCCCe------
Q psy18037 273 ESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGT-CSRFSVKKLSDSNKTLMFFEGCAFPHKG------ 345 (1390)
Q Consensus 273 ~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~-c~~f~v~~~~~~~kt~i~fegc~~~~~g------ 345 (1390)
+||.++||++++++++.+|+|||++|||.++++++ .++...||+ |+.|++.++ +.+++++|+||.+ ...
T Consensus 307 ~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~-~~~~~~LG~~a~~v~~~~i--g~d~~~~i~g~~~-~~~~~~~~~ 382 (590)
T 3p9d_C 307 HYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVE-DLKESDVGTNCGLFKVEMI--GDEYFSFLDNCKE-PGSGSGWSH 382 (590)
T ss_dssp HHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCST-TCCTTSCBCCCSEEECCEE--TTEECEEECC-------------
T ss_pred HHHHhccceeeccCCHHHHHHHHHHhCCceeeccc-CCCHHHhCCcCCEEEEEEE--cCcEEEEEeCCCC-ccccccccc
Confidence 99999999999999999999999999999999999 799999999 999999999 9999999999985 445
Q ss_pred --------------------------------------------------EEEEEecCCHHHHHHHHHHHHHHHHHHHH-
Q psy18037 346 --------------------------------------------------STVILRGASRKELMKVKRVTSFMIYVLYN- 374 (1390)
Q Consensus 346 --------------------------------------------------~TIlLRG~s~~~L~evKr~l~dal~vv~n- 374 (1390)
|||+|||+|+.+|+|+||.++||++++++
T Consensus 383 ~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~a 462 (590)
T 3p9d_C 383 PQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNV 462 (590)
T ss_dssp ---------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998
Q ss_pred ------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 375 ------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 375 ------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
.+++++..+++++..++|+++
T Consensus 463 v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 495 (590)
T 3p9d_C 463 MLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ 495 (590)
T ss_dssp HHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH
T ss_pred HhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH
Confidence 699999999999888778766
No 14
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.7e-38 Score=382.79 Aligned_cols=263 Identities=22% Similarity=0.322 Sum_probs=242.9
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.++ +|.+.|++++++|+..|.+....+.+|++ +|+|++++||+..||++|+|++|+|.+.| +
T Consensus 139 ~~~l~~vA~tsl~sK~~~-~~~~~i~~livdAv~~V~~~~~~~~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~ 215 (518)
T 3iyg_D 139 RETLLNSAATSLNSKVVS-QYSSLLSPMSVDAVMKVIDPATATSVDLR-DIKIVKKLGGTIDDCELVEGLVLTQKVAN-S 215 (518)
T ss_pred hHHHHHHhHhhhccccch-hhHHHHHHHHHHHHHHhhccccCCCcccc-eEEEEEcCCCChhhheEeccEEEeccccc-C
Confidence 567889999999999997 99999999999999999742123468885 79999999999999999999999999999 9
Q ss_pred CcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEe-----cCCccHHHHHH
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLV-----QRNVARLAQES 274 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv-----~k~Vs~~A~~~ 274 (1390)
||++++||||+|++|+|||++.+.+ ..+++.++++|++||..++++|++.|+||||+ +++|++.|++|
T Consensus 216 mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~ 295 (518)
T 3iyg_D 216 GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHF 295 (518)
T ss_pred CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHH
Confidence 9999999999999999999987642 34688899999999999999999999999999 89999999999
Q ss_pred HHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCC-cEEEEEecCCCCCCeEEEEEecC
Q psy18037 275 LQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSN-KTLMFFEGCAFPHKGSTVILRGA 353 (1390)
Q Consensus 275 L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~-kt~i~fegc~~~~~g~TIlLRG~ 353 (1390)
|.++||++++++++.+|+|||++|||.++++++ .+++..||+|+.|++.++ +. ++|+||+||++...+|||+|||+
T Consensus 296 L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~-~l~~~~LG~a~~v~~~~~--g~~~~~~~~~g~~~~~~~~tI~lrG~ 372 (518)
T 3iyg_D 296 LNKMKIMVVKDIEREDIEFICKTIGTKPVAHVD-QFTADMLGSAELAEEVSL--NGSGKLIKITGCASPGKTVTIVVRGS 372 (518)
T ss_pred HHHcCcEEEecCCHHHHHHHHHHhCCEEecccc-cCCHHHCCcCcEEEEEEe--CCCceEEEEECCCCCCceEEEEECCC
Confidence 999999999999999999999999999999999 789999999999999999 88 79999999984367999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 354 SRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 354 s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
++.+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 373 te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 427 (518)
T 3iyg_D 373 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 427 (518)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHH
Confidence 999999999999999999998 699999999999887777765
No 15
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.1e-38 Score=390.61 Aligned_cols=259 Identities=19% Similarity=0.321 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC-
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK- 205 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk- 205 (1390)
++.+.++++++|++|.++ .|.+.|++|+++|+..|.+ +++|++ ||+|++++||++.||++|+|++|+|.+.|.
T Consensus 155 ~~~L~~vA~tsl~sK~~~-~~~~~i~~livdAv~~V~~----~~~dl~-~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~y 228 (550)
T 3p9d_G 155 RELLERCARTAMSSKLIH-NNADFFVKMCVDAVLSLDR----NDLDDK-LIGIKKIPGGAMEESLFINGVAFKKTFSYAG 228 (550)
T ss_dssp --CHHHHHHHHHHHTTTG-GGHHHHHHHHHHHHHHCCS----SSCCGG-GCCCCBCCSSCGGGCCCCSSEEECCCSSCTT
T ss_pred HHHHHHHHHHhccCcccc-ccHhHHHHHHHHHHHHhCc----cccCch-heeEEEecCCCccceeEEeeEEEeccccccc
Confidence 557889999999999997 8999999999999999874 368885 799999999999999999999999999987
Q ss_pred --CCcceecCCcEEEEEeeeecccccc-------cccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHH
Q psy18037 206 --SMLTALNNPKILILQCAIVYQRVEG-------KLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQ 276 (1390)
Q Consensus 206 --~M~~~i~nprIlLL~~~Ley~r~e~-------k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~ 276 (1390)
+||++++||||||++|+|||++++. ...++++++++|++|+++++++|++.|++||+++++|+++|++||.
T Consensus 229 f~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~ 308 (550)
T 3p9d_G 229 FEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFA 308 (550)
T ss_dssp CSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTG
T ss_pred cccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHH
Confidence 8999999999999999999998875 3457899999999999999999999999999999999999999999
Q ss_pred HcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHH
Q psy18037 277 QLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRK 356 (1390)
Q Consensus 277 ~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~ 356 (1390)
++||++++++++.+|+|||++|||.|+++++ .+++..||+|+.|+++++ +.++|++|+||+ ...+|||+|||+|+.
T Consensus 309 ~~gI~~v~~v~k~~lerIa~~tGa~iis~l~-~l~~~~LG~a~~v~~~~i--g~e~~~~~~g~~-~~~~~tI~lrG~te~ 384 (550)
T 3p9d_G 309 DRNIFCAGRVSADDMNRVIQAVGGSIQSTTS-DIKPEHLGTCALFEEMQI--GSERYNLFQGCP-QAKTCTLLLRGGAEQ 384 (550)
T ss_dssp GGTCEEEECCCTTHHHHHHHHTCCCCBSSGG-GCCGGGCCCCSBCCCCCC--SSSCCEEEBCCT-TCCCCCCCBCSSSHH
T ss_pred HcCCccccCcCHHHHHHHHHHhCCceecchh-hCCHHHcCCceEEEEEEe--CCeEEEEEecCC-CCceeEEEEeCCcHH
Confidence 9999999999999999999999999999999 799999999999999999 899999999999 578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 357 ELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 357 ~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 385 ~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 436 (550)
T 3p9d_G 385 VIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQ 436 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTH
T ss_pred HHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHH
Confidence 999999999999999998 799999999999888778766
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.6e-37 Score=383.79 Aligned_cols=261 Identities=20% Similarity=0.256 Sum_probs=241.0
Q ss_pred HHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCCC
Q psy18037 128 SHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSM 207 (1390)
Q Consensus 128 ~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~M 207 (1390)
+.+.++++++|++|.++ .|.+.|++++++|+..|.+.. .+++|+ ++|+|+|++||++.||++|+|++|+|.+.|+.|
T Consensus 178 e~L~~vA~tSl~sK~i~-~~~d~la~l~vdAV~~V~~~~-~~~~d~-~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m 254 (562)
T 3p9d_E 178 DFLLRAAKTSLGSKIVS-KDHDRFAEMAVEAVINVMDKD-RKDVDF-DLIKMQGRVGGSISDSKLINGVILDKDFSHPQM 254 (562)
T ss_dssp HHHHHHHHHHHSSSTTT-TTHHHHHHHHHHHHHTSSTTT-CSCCCC-CCCEEEEESSSCGGGCEEESSEEESSCCCTTSC
T ss_pred HHHHHHHHHhcCCchhH-HHHHHHHHHHHHHheeecccc-cCCCCc-ccEEEEEecCCChhhhceeeeEEEecCCCCCCc
Confidence 57899999999999987 799999999999999987532 356888 479999999999999999999999999999999
Q ss_pred ccee------cCCcEEEEEeeeecccccc----c---ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHH
Q psy18037 208 LTAL------NNPKILILQCAIVYQRVEG----K---LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQES 274 (1390)
Q Consensus 208 ~~~i------~nprIlLL~~~Ley~r~e~----k---~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~ 274 (1390)
|+.+ +||||++|+|||++.+.+. + ..+++.++++|++||..++++|++.|++|||++++|++.|++|
T Consensus 255 ~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~ 334 (562)
T 3p9d_E 255 PKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHL 334 (562)
T ss_dssp CC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHH
T ss_pred CcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHH
Confidence 9999 9999999999999998763 2 3457889999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCC--cEEEEEecCCCCCCeEEEEEec
Q psy18037 275 LQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSN--KTLMFFEGCAFPHKGSTVILRG 352 (1390)
Q Consensus 275 L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~--kt~i~fegc~~~~~g~TIlLRG 352 (1390)
|.++||++++++++.+|+|||++|||.++++++ .++..+||+|+.|+++++ |. +++++|+||+ ...+|||+|||
T Consensus 335 L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~~~i~g~~-~~~~~TIllrG 410 (562)
T 3p9d_E 335 LLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQ-DLSKDKLGTCSRIYEQEF--GTTKDRMLIIEQSK-ETKTVTCFVRG 410 (562)
T ss_dssp HHTTTCCCEECCCTTTHHHHHHHHCCCEEESSS-CCCTTSCEECSCEEEECC--SSSSCCEEEECCCS-CCSCCEEEEEC
T ss_pred HHHCCCEEEeccCHHHHHHHHHHhCCEEEeccc-cCCHHHCCcceEEEEEEe--ccCCceEEEEecCC-CCCeEEEEEeC
Confidence 999999999999999999999999999999999 799999999999999999 74 8999999999 57899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 353 ASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 353 ~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+.+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 411 ~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 466 (562)
T 3p9d_E 411 SNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQ 466 (562)
T ss_dssp TTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHH
Confidence 9999999999999999999998 699999999999888777766
No 17
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.6e-38 Score=392.06 Aligned_cols=262 Identities=16% Similarity=0.255 Sum_probs=241.1
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|.+|..+ .|.+.|++++++|+..|.+. ++..+|++ +|+|+|++||...||++|+|++|+|.+.|++
T Consensus 147 ~~~L~~vA~tsl~sKi~~-~~~d~la~l~vdaV~~V~~~-~~~~~dl~-~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~ 223 (546)
T 3p9d_F 147 REFLLQVARSSLLTKVDA-DLTEVLTPIVTDAVLSVYDA-QADNLDLH-MVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD 223 (546)
T ss_dssp CHHHHHHHHHHTCSTTHH-HHCSSHHHHHHHHHHHTHHH-HHTTCCGG-GEEEECCCCSCTTTCCCCSSCEESCCCCSSS
T ss_pred HHHHHHHHHHHhCCCcch-hHHHHHHHHHHHhheEeecC-CCCcccch-heEEEEecCCCccccEEEeeEEEeccccccc
Confidence 467889999999998765 89999999999999998742 13468885 7999999999999999999999999999999
Q ss_pred CcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcC----------CCEEEecCCccH
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALK----------PDIVLVQRNVAR 269 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~----------pnVVlv~k~Vs~ 269 (1390)
||++++||||||++|||||++++.+ ..+++.++++|++|++++|++|+.++ |+|||++++|++
T Consensus 224 m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~ 303 (546)
T 3p9d_F 224 MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDP 303 (546)
T ss_dssp SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCH
T ss_pred CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcH
Confidence 9999999999999999999998753 46799999999999999999999865 569999999999
Q ss_pred HHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEE
Q psy18037 270 LAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVI 349 (1390)
Q Consensus 270 ~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIl 349 (1390)
.|++||.++||++++++++.+|+|||++|||.|+++++ .+++..||+|+.|+++++ +.++|+||+||+ ...+|||+
T Consensus 304 ~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~i~g~~-~~~~~tI~ 379 (546)
T 3p9d_F 304 MSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVE-DLSPQILGFSGLVYQETI--GEEKFTYVTENT-DPKSCTIL 379 (546)
T ss_dssp HHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCS-SCSTTCCBCCCCBCBCCC--SSCCCEECSSCS-CCSCEEEE
T ss_pred HHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchh-hCCHhHCCcccEEEEEEe--cCceEEEEecCC-CCceEEEE
Confidence 99999999999999999999999999999999999999 799999999999999999 899999999999 47899999
Q ss_pred EecCCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHH---hhhhccCCCC
Q psy18037 350 LRGASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDE---QAYVIQTKKP 395 (1390)
Q Consensus 350 LRG~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~---~a~~~~g~~~ 395 (1390)
|||+|+.+|+|+||.++||++++++ .+++++..+++ ++..++|+++
T Consensus 380 lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq 441 (546)
T 3p9d_F 380 IKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTK 441 (546)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHH
Confidence 9999999999999999999999998 79999999998 5777777655
No 18
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-37 Score=374.99 Aligned_cols=259 Identities=17% Similarity=0.208 Sum_probs=240.6
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|.+|..+ |.+.|.+++++|+..|.++ ++.+|++ +|+|.|++||++.||++|+|++|+|.+.|
T Consensus 141 ~~~l~~va~tsl~sK~~~--~~~~i~~livdAv~~V~~~--~~~i~v~-~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-- 213 (512)
T 3iyg_Q 141 VDEVSSLLHTSVMSKQYG--NEVFLAKLIAQACVSIFPD--SGHFNVD-NIRVCKILGSGVHSSSVLHGMVFKKETEG-- 213 (512)
T ss_pred HHHHHHHHHHHhCCCCcc--chHHHHHHHHHHHHHHhcc--CCcccHh-HeeEeeccCCCcccceEEeeEEEecCcCC--
Confidence 567889999999999764 8999999999999999865 3468886 69999999999999999999999999986
Q ss_pred CcceecCCcEEEEEeeeeccccccc----c---cchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHcC
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEGK----L---LSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLG 279 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~k----~---~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~G 279 (1390)
||++++||||++++|||++.+++.+ + .++.+++++|++||+++|++|++.|++||+++++|+++|++||.++|
T Consensus 214 ~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~ 293 (512)
T 3iyg_Q 214 DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYN 293 (512)
T ss_pred CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC
Confidence 9999999999999999999988865 3 45888999999999999999999999999999999999999999999
Q ss_pred CEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHHH
Q psy18037 280 ITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELM 359 (1390)
Q Consensus 280 I~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L~ 359 (1390)
|++++++++.+|+|||++|||.|+++++ .+++..||+|+.|++.++ |++++++|+||+....+|||+|||+|+.+|+
T Consensus 294 I~av~~~~~~dle~ia~~tGa~iis~l~-~~~~~~LG~a~~v~~~~~--g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~ 370 (512)
T 3iyg_Q 294 IMLVRLNSKWDLRRLCKTVGATALPRLN-PPVLEEMGHCDSVYLSEV--GDTQVVVFKHEKEDGAISTIVLRGSTDNLMD 370 (512)
T ss_pred eEEEEeCCHHHHHHHHHHhCCEEecccc-cCCHHHCCcccEEEEEEe--CCeEEEEEEcccCCCceEEEEECCCcHHHHH
Confidence 9999999999999999999999999999 789999999999999999 9999999999974467999999999999999
Q ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 360 KVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 360 evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 371 E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 419 (512)
T 3iyg_Q 371 DIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ 419 (512)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 999999999999998 699999999999887777665
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.6e-38 Score=387.57 Aligned_cols=261 Identities=17% Similarity=0.251 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCC----CCCCCCcccceEEEEecCCCCCcceeEEeEEEeecc
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQ----NIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNV 202 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~----~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ 202 (1390)
++.+.++++++|++|.++ .| +.|++|+++|+..|.++. ....+|++ +|+|+|++||++.||++|+|+||+|++
T Consensus 156 ~~~l~~va~tsl~sK~~~-~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~I~k~~Ggs~~dS~lv~G~v~dk~~ 232 (568)
T 3p9d_H 156 KNELLKMIKPVISSKKYG-SE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIRVVKIMGGSLSNSTVIKGMVFNREP 232 (568)
T ss_dssp THHHHHHHHHHHTTTSTT-CH-HHHHHHHHHHHTTSCC---------CCCGG-GCEEEEEESSCGGGCEEESSCCBSSCB
T ss_pred HHHHHHHHHHHhhccCcc-hH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEEEEEccCCCcchheeeccEEEeecc
Confidence 467889999999999987 77 999999999999998741 12468885 799999999999999999999999998
Q ss_pred CCCCCcceec---CCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHH
Q psy18037 203 SHKSMLTALN---NPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQ 272 (1390)
Q Consensus 203 ahk~M~~~i~---nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~ 272 (1390)
. +||++++ ||||+|++|+|||++++.+ ..++++++++|++|++++|++|++.|+||||++++|+++|+
T Consensus 233 ~--~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al 310 (568)
T 3p9d_H 233 E--GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELAL 310 (568)
T ss_dssp S--SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHH
T ss_pred c--CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHH
Confidence 6 7999999 9999999999999998752 34688899999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCC-CCCeEEEEEe
Q psy18037 273 ESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAF-PHKGSTVILR 351 (1390)
Q Consensus 273 ~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~-~~~g~TIlLR 351 (1390)
+||.++||++++++++.+|+|||++|||.++++++ .+++..||+|+.|++.++ ++++|+||+||++ ...+|||+||
T Consensus 311 ~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~-~l~~~~LG~a~~v~~~~i--g~~~~~~~~g~~~l~~~~~TIllr 387 (568)
T 3p9d_H 311 HYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLG-APTPEELGLVETVKTMEI--GGDRVTVFKQEQGEISRTSTIILR 387 (568)
T ss_dssp HHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSS-CCCGGGCEECSCCCCCEE--TTEECBCCCCCSSSCCSSCEEEEE
T ss_pred HHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccc-cCCHHHCCcceEEEEEEe--cCceEEEEecCCCCCCCeEEEEEC
Confidence 99999999999999999999999999999999999 789999999999999999 9999999999982 2579999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 352 GASRKELMKVKRVTSFMIYVLYN---------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 352 G~s~~~L~evKr~l~dal~vv~n---------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+++.+|+|+||+++||++++++ .+++++..+++++..++|+++
T Consensus 388 G~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq 446 (568)
T 3p9d_H 388 GATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQ 446 (568)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 99999999999999999999998 688999999999988888776
No 20
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.1e-37 Score=385.04 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCC-CCC-CCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKP-DQN-IDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSH 204 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~p-d~~-~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ah 204 (1390)
++.+.++++++|++|.++ .|.+.|++|+++|+..|.| +.. .+.+|+++ |+|+|++||++.||++|+|++|+|.+.|
T Consensus 153 ~e~L~~vA~tsl~sK~~~-~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~-I~I~k~~Ggs~~ds~lv~G~v~dk~~~~ 230 (559)
T 3p9d_A 153 KETLINIAKTSMSSKIIG-ADSDFFSNMVVDALLAVKTQNSKGEIKYPVKA-VNVLKAHGKSATESLLVPGYALNCTVAS 230 (559)
T ss_dssp CTTHHHHHHHTTSSSGGG-TTHHHHHHHHHHHHHHHCCEESSSCEECCTTC-CCEEEEESSCSSCCBCCSEECCCCCCSS
T ss_pred HHHHHHHHHHHhccCccc-chhHHHHHHHHHHHHHhcccccCCCCccchhH-eEEEEecCCCccceeEeccEEEeecccC
Confidence 457888999999999987 8999999999999999985 222 24688865 9999999999999999999999999999
Q ss_pred CCCcceec--CCcEEEEEeeeecccccc-------cccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHH
Q psy18037 205 KSMLTALN--NPKILILQCAIVYQRVEG-------KLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESL 275 (1390)
Q Consensus 205 k~M~~~i~--nprIlLL~~~Ley~r~e~-------k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L 275 (1390)
+.||++++ ||||+|++|+|+|++++. ...+++.++++|++||..++++|++.|++|||++++|++.|++||
T Consensus 231 ~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L 310 (559)
T 3p9d_A 231 QAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEF 310 (559)
T ss_dssp TTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHH
T ss_pred CCcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHH
Confidence 99999999 999999999999998874 356799999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEccChhHHHHHHHHhCCeEeeec------ccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEE
Q psy18037 276 QQLGITLVLNVKTTVLERIARCTRADLVYSV------DVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVI 349 (1390)
Q Consensus 276 ~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Si------d~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIl 349 (1390)
.++||++++++++.+|+|||++|||.+++++ + .+++..||+|+.|+++++ +.++++||+||. ...+|||+
T Consensus 311 ~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e-~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~tI~ 386 (559)
T 3p9d_A 311 VEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEE-TFESSYLGLCDEVVQAKF--SDDECILIKGTS-KHSSSSII 386 (559)
T ss_dssp HHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCC-CCCTTTSCCEEEEEEEEC--SSCEEECEEEES-SSCCCCEE
T ss_pred HHcCCceEccCCHHHHHHHHHHhCCEEEeccccccccc-cCCHhHCccceEEEEEEE--cCceEEEEEcCC-CCCEEEEE
Confidence 9999999999999999999999999999999 5 688999999999999999 999999999999 46799999
Q ss_pred EecCCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 350 LRGASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 350 LRG~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|||+|+.+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 387 lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 445 (559)
T 3p9d_A 387 LRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQ 445 (559)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHH
T ss_pred EcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHH
Confidence 9999999999999999999999999 799999999999888777765
No 21
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.5e-37 Score=331.16 Aligned_cols=166 Identities=30% Similarity=0.529 Sum_probs=150.3
Q ss_pred CCcceeEEeEEEeeccCCCCCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCC
Q psy18037 187 RNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPD 259 (1390)
Q Consensus 187 ~~DS~lI~GvV~~Kn~ahk~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pn 259 (1390)
+.||+||+|+||+|+++|++||++++|||||||+|||||++++.+ ..+++.++++|++|++++|++|+++|||
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 479999999999999999999999999999999999999998763 3579999999999999999999999999
Q ss_pred EEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccc-cceEEEEEEecCCcEEEEEec
Q psy18037 260 IVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGT-CSRFSVKKLSDSNKTLMFFEG 338 (1390)
Q Consensus 260 VVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~-c~~f~v~~~~~~~kt~i~feg 338 (1390)
|||++|+|+++|++||.++||+++++|++.+|+||||+|||+|+++++ .+++.+||+ |+.|+++++ |+++|+||+|
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~-~l~~~~LG~~~~~v~~~~i--g~~~~~~~~g 157 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPE-ELREDDVGTGAGLLEIKKI--GDEYFTFITD 157 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGG-GCCGGGSBCCEEEEEEEEE--TTEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChh-hCChhhhCCcccEEEEEEE--CCeEEEEEEC
Confidence 999999999999999999999999999999999999999999999999 799999999 999999999 9999999999
Q ss_pred CCCCCCeEEEEEecCCHH
Q psy18037 339 CAFPHKGSTVILRGASRK 356 (1390)
Q Consensus 339 c~~~~~g~TIlLRG~s~~ 356 (1390)
|+ ..++|||||||++.+
T Consensus 158 c~-~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 158 CK-DPKACTILLRGASHH 174 (178)
T ss_dssp ES-STTSCEEEEEC----
T ss_pred CC-CCCEEEEEEECCCcc
Confidence 99 578999999999964
No 22
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1e-37 Score=383.16 Aligned_cols=263 Identities=17% Similarity=0.274 Sum_probs=244.5
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.++ .|.+.|++|+++|+..|.+.. .+.+|++ +|+|+|++||++.||++|+|++|+|.+.|+.
T Consensus 147 ~e~l~~va~tsl~sK~~~-~~~~~i~~livdAv~~V~~~~-~~~i~v~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~ 223 (528)
T 3p9d_D 147 REQLVRAASTSLSSKIVS-QYSSFLAPLAVDSVLKISDEN-SKNVDLN-DIRLVKKVGGTIDDTEMIDGVVLTQTAIKSA 223 (528)
T ss_dssp HHHHHHHHHHHSCSSSCS-TTHHHHHHHHHHHHHTTCCTT-TTCCCGG-GSBCCCCCSSCSCCCEEESSCBCCCCCCCSS
T ss_pred HHHHHHHHHHHhcCCccc-hhHHHHHHHHHHHHHHhcccc-CCccceE-EEEEEEecCCCccceEEEeeeEEeecccCcc
Confidence 567889999999999997 999999999999999997532 3468886 6999999999999999999999999999998
Q ss_pred -CcceecCCcEEEEEeeeecccccc-------cccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-----cHHHHH
Q psy18037 207 -MLTALNNPKILILQCAIVYQRVEG-------KLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNV-----ARLAQE 273 (1390)
Q Consensus 207 -M~~~i~nprIlLL~~~Ley~r~e~-------k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~V-----s~~A~~ 273 (1390)
||++++||||+|++|+|+|++++. ...+++.++++|++||..++++|++.|++|||++++| +++|++
T Consensus 224 ~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~ 303 (528)
T 3p9d_D 224 GGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALH 303 (528)
T ss_dssp SCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHH
T ss_pred cCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHH
Confidence 999999999999999999998875 3567899999999999999999999999999999999 999999
Q ss_pred HHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCC--CCCCeEEEEEe
Q psy18037 274 SLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCA--FPHKGSTVILR 351 (1390)
Q Consensus 274 ~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~--~~~~g~TIlLR 351 (1390)
||.++||++++++++.+|+|||++|||.++++++ .+++..||+|+.|++.++ ++++|++|+||+ +...+|||+||
T Consensus 304 ~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~-~l~~~~LG~a~~v~~~~i--g~~~~~~i~g~~~~~~~~~~tI~lr 380 (528)
T 3p9d_D 304 FLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIE-LFTEDRLDSADLVEEIDS--DGSKIVRVTGIRNNNARPTVSVVIR 380 (528)
T ss_dssp HHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCST-TCCSSSEEEESCEECCEE--TTEECCBCTTBCCGGGCCCCEEECC
T ss_pred HHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccc-cCCHHHCCcccEEEEEEE--CCEEEEEEEcccccCCCceEEEEEc
Confidence 9999999999999999999999999999999999 799999999999999999 999999999998 42469999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 352 GASRKELMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 352 G~s~~~L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
|+|+.+|+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 381 G~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 437 (528)
T 3p9d_D 381 GANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQA 437 (528)
T ss_dssp CSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHH
Confidence 99999999999999999999998 799999999999877677665
No 23
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=100.00 E-value=3.9e-36 Score=353.66 Aligned_cols=153 Identities=23% Similarity=0.401 Sum_probs=133.9
Q ss_pred cceEEEEccHHHHHHHHHhhCCCChhHHHhhhhhhhhhcccCCCCCCcccccCchHHHHhhhcccccChHHHHHHhhhcc
Q psy18037 1182 ANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCI 1261 (1390)
Q Consensus 1182 ~~~~~~~y~~~~F~~lR~~~~~~~~~~~~~Sl~r~~~~~~~~gksgs~f~~t~d~~~~~~e~~~~~~~~~~fi~SL~~~~ 1261 (1390)
.+|+|++|||.+|++||+++|+ ++++|++||++|.
T Consensus 75 ~~f~~k~Y~P~~F~~LR~~~~i---------------------------------------------~~~dy~~Sl~~~~ 109 (394)
T 2ybx_A 75 SHFKFKEYCPMVFRNLRERFGI---------------------------------------------DDQDFQNSLTRSA 109 (394)
T ss_dssp SEEEEEEESHHHHHHHHHHTTC---------------------------------------------CHHHHHHHHHSSC
T ss_pred CCeEEEEECHHHHHHHHHHhCC---------------------------------------------CHHHHHHHhcCCC
Confidence 4699999999999999999987 6889999999998
Q ss_pred cc-cccCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEEEEEccCCCCceEEE
Q psy18037 1262 RW-EARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNL 1340 (1390)
Q Consensus 1262 ~~-~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~~~k~~~ 1340 (1390)
+| .++||||||+||+|.|+|||||||++.|+++|+++||+||+||.++ +|+|||+||||+|+|++.+ .++||
T Consensus 110 ~~~~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~---~~~TLL~k~~Gly~v~~~~----~~~~f 182 (394)
T 2ybx_A 110 PLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVEC---HGITLLPQFLGMYRLNVDG----VEIYV 182 (394)
T ss_dssp CEECC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHT---TTCCSSCCEEEEEEEEETT----EEEEE
T ss_pred ccccCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhc---CCCcChhhhcEEEEEEECC----eEEEE
Confidence 87 6999999999999999999999999999999999999999999753 8999999999999999974 47999
Q ss_pred EEEeccCCCC-CceeEEEecCcccCCccCCCCCCCCCCCccccCCccc
Q psy18037 1341 LVMENLFHSR-NIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEI 1387 (1390)
Q Consensus 1341 iVMeNlf~~~-~i~~~yDLKGS~~~R~~~~~~~~~~~~~vllD~n~~~ 1387 (1390)
|||+|||+++ .|+++||||||+++|++.++ ++.....||+|+||.+
T Consensus 183 vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~-~~~~~~~~LkD~df~~ 229 (394)
T 2ybx_A 183 IVTRNVFSHRLSVYRKYDLKGSTVAREASDK-EKAKELPTLKDNDFIN 229 (394)
T ss_dssp EEEECSSCSSSCCSEEEEECCSSSCCCCCHH-HHTSSSCEECHHHHHH
T ss_pred EEEecCCCCCcceeeeeeecccccCCccCcc-ccccCcceecccchHh
Confidence 9999999997 89999999999999999764 2222357999999853
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.8e-36 Score=368.00 Aligned_cols=257 Identities=24% Similarity=0.336 Sum_probs=239.0
Q ss_pred HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCCC
Q psy18037 127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKS 206 (1390)
Q Consensus 127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk~ 206 (1390)
++.+.++++++|++|.++ .|.+.|.+|+++|+..|.++. |+ ++|+|++++||...||++|+|++|+|.+.|..
T Consensus 150 ~~~l~~vA~tSl~sK~~~-~~~~~i~~li~dAv~~V~~~~-----~~-~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~ 222 (527)
T 3p9d_B 150 REDLIHIAKTTLSSKILS-QDKDHFAELATNAILRLKGST-----NL-EHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ 222 (527)
T ss_dssp HHHHHHHHHHHHTTSGGG-GGHHHHHHHHHHHHHTTCTTC-----CT-TSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC
T ss_pred HHHHHHHHHhccccCccc-chHHHHHHHHHHHHHHhcccC-----Cc-ceEEEEEcCCCCccccEEEEeEEEecccCCCC
Confidence 678899999999999987 999999999999999997642 55 36999999999999999999999999999986
Q ss_pred CcceecCCcEEEEEeeeecccccc---c--c---cchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037 207 MLTALNNPKILILQCAIVYQRVEG---K--L---LSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL 278 (1390)
Q Consensus 207 M~~~i~nprIlLL~~~Ley~r~e~---k--~---~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~ 278 (1390)
|++++||||+|++|+||+++++. + + ..++.++++|++|++.++++|++.|++||+++++|+++|++||.++
T Consensus 223 -p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~ 301 (527)
T 3p9d_B 223 -PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL 301 (527)
T ss_dssp -CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT
T ss_pred -CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC
Confidence 99999999999999999998862 2 2 3578899999999999999999999999999999999999999999
Q ss_pred CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHHH
Q psy18037 279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKEL 358 (1390)
Q Consensus 279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~L 358 (1390)
||+++++++..+|+|||++|||.|+++++ .+++.+||+|+.|+++++ +.++|++|+||+ ...+|||+|||+|+.+|
T Consensus 302 ~i~av~~~~~~dle~ia~~tGa~iv~~~~-~~~~~~LG~a~~v~~~~i--g~~~~~~~~g~~-~~~~~tI~lrg~te~~l 377 (527)
T 3p9d_B 302 GINSIEHADFEGVERLALVTGGEVVSTFD-EPSKCKLGECDVIEEIML--GEQPFLKFSGCK-AGEACTIVLRGATDQTL 377 (527)
T ss_dssp CBCCCCCCHHHHHHHHHHHTCCCCCSTTS-CCTTSCEECSBCCBCCCS--SSCCBCCBCSSC-CSCCEECBCCTTCTTHH
T ss_pred CCEEEecCCHHHHHHHHHHhCCEEecchh-hCCHHHCCCCcEEEEEEe--cceEEEEEECCC-CCCEEEEEEcCCCHHHH
Confidence 99999999999999999999999999999 799999999999999998 899999999999 56799999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 359 MKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 359 ~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
+|+||.++||++++++ .+++++..+++++..++|+++
T Consensus 378 ~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 427 (527)
T 3p9d_B 378 DEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKS 427 (527)
T ss_dssp HHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHH
Confidence 9999999999999998 799999999999887777665
No 25
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=349.00 Aligned_cols=151 Identities=28% Similarity=0.456 Sum_probs=119.2
Q ss_pred cceEEEEccHHHHHHHHHhhCCCChhHHHhhhhhhhhhcccCCCCCCcccccCchHHHHhhhcccccChHHHHHHhhhcc
Q psy18037 1182 ANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCI 1261 (1390)
Q Consensus 1182 ~~~~~~~y~~~~F~~lR~~~~~~~~~~~~~Sl~r~~~~~~~~gksgs~f~~t~d~~~~~~e~~~~~~~~~~fi~SL~~~~ 1261 (1390)
.+|+|++|||.+|++||+++|+ ++++|++|||+|.
T Consensus 67 ~~f~~k~Y~P~~F~~LR~~~~i---------------------------------------------~~~dy~~Sl~~~~ 101 (392)
T 2gk9_A 67 SHFKFKEYCPQVFRNLRDRFGI---------------------------------------------DDQDYLVSLTRNP 101 (392)
T ss_dssp SSBEEEEESHHHHHHHHHTTTC---------------------------------------------CHHHHHHHHHSSC
T ss_pred CceEEEEECHHHHHHHHHHhCC---------------------------------------------CHHHHHHHhcCCC
Confidence 4699999999999999999987 6889999999999
Q ss_pred cccccCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEEEEEccCCCCceEEEE
Q psy18037 1262 RWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLL 1341 (1390)
Q Consensus 1262 ~~~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~~~k~~~i 1341 (1390)
+|. +||||| +||+|.|+|||||||++.|+++|+++||+||+||.++ +|+|||+||||+|+|++.+. ++|||
T Consensus 102 ~~~-s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~---~~~TLL~k~~Gly~v~~~~~----~~~~v 172 (392)
T 2gk9_A 102 PSE-SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKC---HGNTLLPQFLGMYRVSVDNE----DSYML 172 (392)
T ss_dssp CCC-CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHT---TSCSSSCCEEEEEECCBSSC----CCEEE
T ss_pred ccc-CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhh---CCCcchhhhceEEEEEECCe----EEEEE
Confidence 999 999999 9999999999999999999999999999999999653 89999999999999988753 68999
Q ss_pred EEeccCCCC-CceeEEEecCcccCCccCCCCCCCCCCCccccCCccc
Q psy18037 1342 VMENLFHSR-NIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEI 1387 (1390)
Q Consensus 1342 VMeNlf~~~-~i~~~yDLKGS~~~R~~~~~~~~~~~~~vllD~n~~~ 1387 (1390)
||||||+++ .|+++||||||+++|++.++ ++.....||+|+||.+
T Consensus 173 VM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~-~~~~~~~~LkD~df~~ 218 (392)
T 2gk9_A 173 VMRNMFSHRLPVHRKYDLKGSLVSREASDK-EKVKELPTLRDMDFLN 218 (392)
T ss_dssp EEECSSCSSSCCSCCCEECC------------------CCBTTC--C
T ss_pred EEecCCCCCcceeeeeeecccccCCccCcc-ccccccceecccchhh
Confidence 999999997 89999999999999999775 3333357999999953
No 26
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.98 E-value=2e-32 Score=286.33 Aligned_cols=146 Identities=28% Similarity=0.433 Sum_probs=140.6
Q ss_pred EEeEEEeeccCCCCCcceecCCcEEEEEeeeecccccc-------cccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Q psy18037 193 VSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEG-------KLLSLEPVIMQETEYLRNVVARISALKPDIVLVQR 265 (1390)
Q Consensus 193 I~GvV~~Kn~ahk~M~~~i~nprIlLL~~~Ley~r~e~-------k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k 265 (1390)
|+|+||+|+++|++||++++|||||||+|||||++++. ...+++.++++|++||+++|++|+++|||||||+|
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 57999999999999999999999999999999999875 36789999999999999999999999999999999
Q ss_pred CccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEecCCcEEEEEecCCC
Q psy18037 266 NVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAF 341 (1390)
Q Consensus 266 ~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~ 341 (1390)
+|+++|++||.++||+++++|++.+|+||||+|||+|+++++ .+++..||+|+.|+++++ |++.|+||+||++
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~-~l~~~~LG~~~~v~e~~i--g~~~~~~~~g~~~ 153 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLD-DLTPSVLGEAETVEERKI--GDDRMTFVMGCKN 153 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTT-SCCTTSCEEEEEEEEEEE--TTEEEEEEESCC-
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccc-cCCcccCccceEEEEEEE--CCeEEEEEECCCC
Confidence 999999999999999999999999999999999999999999 799999999999999999 9999999999995
No 27
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.92 E-value=8.8e-25 Score=268.52 Aligned_cols=214 Identities=14% Similarity=0.172 Sum_probs=184.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcc-eeEEeEEEeeccCCC-------CCcceecCCcEE
Q psy18037 146 SWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDS-FVVSGIVHSKNVSHK-------SMLTALNNPKIL 217 (1390)
Q Consensus 146 ~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS-~lI~GvV~~Kn~ahk-------~M~~~i~nprIl 217 (1390)
.|.+.|.+++++|+..|.++ ..|+|+ +||++.|| ++|+|++|+|.+.|. +|++.++|||||
T Consensus 152 ~~~~~i~~liadAv~~V~~d---------g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Il 220 (547)
T 1kp8_A 152 NSDETVGKLIAEAMDKVGKE---------GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFIL 220 (547)
T ss_dssp TSCHHHHHHHHHHHHHHCTT---------SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEE
T ss_pred cchhHHHHHHHHHHHHhCcC---------CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEE
Confidence 47889999999999999753 126776 89999999 999999999999886 478889999999
Q ss_pred EEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc------CCEEEE-----cc
Q psy18037 218 ILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL------GITLVL-----NV 286 (1390)
Q Consensus 218 LL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~------GI~vv~-----nV 286 (1390)
|++++|+-. +. |..++++|++.|++|||++++|++.|+++|..+ ||++|+ ++
T Consensus 221 l~d~~Is~~---------~~--------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~ 283 (547)
T 1kp8_A 221 LADKKISNI---------RE--------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDR 283 (547)
T ss_dssp CEESEECCG---------GG--------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHH
T ss_pred EEcCcCCCH---------HH--------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccc
Confidence 999987632 21 236788899999999999999999999999995 557887 89
Q ss_pred ChhHHHHHHHHhCCeEeee-----cccccCCccccccceEEEEEEecCCcEEEEEecCCCC-------------------
Q psy18037 287 KTTVLERIARCTRADLVYS-----VDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFP------------------- 342 (1390)
Q Consensus 287 K~~~LeRIAr~TgA~Ii~S-----id~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~------------------- 342 (1390)
++.+|+|||++|||.++++ ++ .++...||+|+.|++ +.+++++|+||.++
T Consensus 284 rk~~le~ia~~tG~~ii~~~~g~~l~-~~~~~~LG~a~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 357 (547)
T 1kp8_A 284 RKAMLQDIATLTGGTVISEEIGMELE-KATLEDLGQAKRVVI-----NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATS 357 (547)
T ss_dssp HHHHHHHHHHHHTCCCEEGGGTCCST-TCCTTTSEEEEEEEE-----CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCS
T ss_pred cHHHHHHHHHHhCCeEecccccCCcc-cCCHHHCCceeEEEE-----ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999996 88 789999999999987 56899999999842
Q ss_pred ---------------CCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHhhhhccCCC
Q psy18037 343 ---------------HKGSTVILRGASRKELMKVKRVTSFMIYVLYN------------WKLESSLLMDEQAYVIQTKK 394 (1390)
Q Consensus 343 ---------------~~g~TIlLRG~s~~~L~evKr~l~dal~vv~n------------~~LE~s~~ld~~a~~~~g~~ 394 (1390)
...|||+|||+|+.+|+|.||.++||++++++ .+++++..+++++. ++|.+
T Consensus 358 ~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~ 435 (547)
T 1kp8_A 358 DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQ 435 (547)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHH
T ss_pred hhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchH
Confidence 15899999999999999999999999999998 68888888887754 44443
No 28
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.92 E-value=3.9e-24 Score=263.11 Aligned_cols=214 Identities=14% Similarity=0.177 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcc-eeEEeEEEeeccCCC-------CCcceecCCcEEEE
Q psy18037 148 ASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDS-FVVSGIVHSKNVSHK-------SMLTALNNPKILIL 219 (1390)
Q Consensus 148 ~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS-~lI~GvV~~Kn~ahk-------~M~~~i~nprIlLL 219 (1390)
.+.|.+++++|+..|.++ ..|+|+ .||++.|| ++|+|++|+|.+.|. +|++.++||||+|+
T Consensus 153 ~~~i~~li~dAv~~V~~~---------g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 221 (543)
T 1we3_A 153 DPEVGKLIADAMEKVGKE---------GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIV 221 (543)
T ss_dssp CHHHHHHHHHHHHTTCTT---------SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhCcC---------CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEE
Confidence 578899999999988753 126776 89999999 999999999999886 47888999999999
Q ss_pred EeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc------CCEEEE-----ccCh
Q psy18037 220 QCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL------GITLVL-----NVKT 288 (1390)
Q Consensus 220 ~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~------GI~vv~-----nVK~ 288 (1390)
++.|+ +.+. |..++++|++.|++|||++++|++.|+++|..+ ||++|+ ++++
T Consensus 222 d~~Is---------~~~~--------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 222 EKKVS---------NVRE--------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp SSCBC---------CHHH--------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CCCcC---------CHHH--------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 98654 3332 347899999999999999999999999999984 668888 8899
Q ss_pred hHHHHHHHHhCCeEeee-----cccccCCccccccceEEEEEEecCCcEEEEEecCCCC---------------------
Q psy18037 289 TVLERIARCTRADLVYS-----VDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFP--------------------- 342 (1390)
Q Consensus 289 ~~LeRIAr~TgA~Ii~S-----id~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~--------------------- 342 (1390)
.+|+|||++|||.++++ ++ .++...||+|+.|++ +.+++++|+||.++
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~-~~~~~~LG~a~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 358 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLE-NATLSMLGRAERVRI-----TKDETTIVGGKGKKEDIEARINGIKKELETTDSEY 358 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGG-GCCGGGCEEEEEEEE-----CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHH
T ss_pred HHHHHHHHHhCCceeeccccCCcc-cCCHHHCCCceEEEE-----EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchh
Confidence 99999999999999995 88 789999999999987 56899999999842
Q ss_pred -------------CCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHhhhhccCCCC
Q psy18037 343 -------------HKGSTVILRGASRKELMKVKRVTSFMIYVLYN------------WKLESSLLMDEQAYVIQTKKP 395 (1390)
Q Consensus 343 -------------~~g~TIlLRG~s~~~L~evKr~l~dal~vv~n------------~~LE~s~~ld~~a~~~~g~~~ 395 (1390)
...|||+|||+|+.+|+|+||.++||++++++ .+++++..+++++..++|.++
T Consensus 359 ~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q 436 (543)
T 1we3_A 359 AREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA 436 (543)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH
Confidence 26899999999999999999999999999998 699999999999876555544
No 29
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.91 E-value=5.5e-25 Score=270.45 Aligned_cols=209 Identities=13% Similarity=0.178 Sum_probs=152.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcc-eeEEeEEEeeccCCC-------CCcceecCCcEE
Q psy18037 146 SWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDS-FVVSGIVHSKNVSHK-------SMLTALNNPKIL 217 (1390)
Q Consensus 146 ~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS-~lI~GvV~~Kn~ahk-------~M~~~i~nprIl 217 (1390)
.|.+.|.+++++|+..|.++. .|+|+ +||++.|| ++|+|++|+|.+.|. +|++.++|||||
T Consensus 153 ~~~~~i~~li~dAv~~V~~~g---------~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Il 221 (545)
T 1iok_A 153 NGESFIGQQIAEAMQRVGNEG---------VITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYIL 221 (545)
T ss_dssp TTCHHHHHHHHHHHHHHCTTS---------CCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEE
T ss_pred CCchhHHHHHHHHHHHhccCC---------eEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEE
Confidence 578999999999999997541 25665 89999999 999999999999885 488889999999
Q ss_pred EEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc------CCEEEE-----cc
Q psy18037 218 ILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL------GITLVL-----NV 286 (1390)
Q Consensus 218 LL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~------GI~vv~-----nV 286 (1390)
|++++|+-.+ . |..++++|++.|++||+++++|++.|+++|..+ ||++|+ ++
T Consensus 222 l~d~~I~~~~---------~--------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~ 284 (545)
T 1iok_A 222 LHEKKLSSLQ---------P--------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDR 284 (545)
T ss_dssp ECSSCBCCCC---------C-------------------CCCCEEEESCBC-----------------CEEEECSCCTTH
T ss_pred EEcCCcCCHH---------H--------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhc
Confidence 9999876321 1 236788899999999999999999999999995 567887 99
Q ss_pred ChhHHHHHHHHhCCeEeee-----cccccCCccccccceEEEEEEecCCcEEEEEecCCCC-------------------
Q psy18037 287 KTTVLERIARCTRADLVYS-----VDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFP------------------- 342 (1390)
Q Consensus 287 K~~~LeRIAr~TgA~Ii~S-----id~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~------------------- 342 (1390)
++.+|+|||++|||.++++ ++ .++...||+|+.|++ +.+++++|+||.++
T Consensus 285 ~~~~le~ia~~tGa~ii~~~~~~~l~-~~~~~~LG~a~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 358 (545)
T 1iok_A 285 RKAMLQDIAILTGGQVISEDLGMKLE-NVTIDMLGRAKKVSI-----NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTS 358 (545)
T ss_dssp HHHHHHHHHHHHTC----------------CTTSEEEEEEEE-----CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred cHHHHHHHHHhcCCeeecccccCCcc-cCCHHHcCcCcEEEE-----ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999996 88 789999999999987 56899999999843
Q ss_pred ---------------CCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHhhh
Q psy18037 343 ---------------HKGSTVILRGASRKELMKVKRVTSFMIYVLYN------------WKLESSLLMDEQAY 388 (1390)
Q Consensus 343 ---------------~~g~TIlLRG~s~~~L~evKr~l~dal~vv~n------------~~LE~s~~ld~~a~ 388 (1390)
...|||+|||+|+.+|+|+||.++||++++++ .+++++..+++++.
T Consensus 359 ~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~ 431 (545)
T 1iok_A 359 DYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSG 431 (545)
T ss_dssp SSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC
T ss_pred hhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc
Confidence 25899999999999999999999999999998 46666666666544
No 30
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.89 E-value=3.1e-23 Score=254.32 Aligned_cols=219 Identities=13% Similarity=0.136 Sum_probs=177.1
Q ss_pred HHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCCCCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC--
Q psy18037 128 SHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK-- 205 (1390)
Q Consensus 128 ~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk-- 205 (1390)
+.+.+++++++. .+.|.+++++|+..|.++ ..|+|.+.. |...||++|+|++|+|.+.|+
T Consensus 141 e~L~~vA~iS~~--------~~~i~~liadAv~~V~~d---------gvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~ 202 (546)
T 3rtk_A 141 EQIAATAAISAG--------DQSIGDLIAEAMDKVGNE---------GVITVEESN-TFGLQLELTEGMRFDKGYISGYF 202 (546)
T ss_dssp HHHHHHHHHHHT--------CHHHHHHHHHHHHHSCTT---------SEEEEECCS-SSSCEEEEECEEEESCCBSSGGG
T ss_pred HHHHhHeEEeCC--------chHHHHHHHHHHHHhccC---------CceEEEecC-CcccceEEeeeEEEcCCccCccc
Confidence 445555655543 357889999999988753 137888753 566899999999999999886
Q ss_pred -----CCcceecCCcEEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHcC-
Q psy18037 206 -----SMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLG- 279 (1390)
Q Consensus 206 -----~M~~~i~nprIlLL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~G- 279 (1390)
+|++.++||||||+++.|.- .+. |..++++|++.|++||+++++|++.|+++|..++
T Consensus 203 vt~~e~m~~~len~kIll~d~kIs~---------~~~--------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~l 265 (546)
T 3rtk_A 203 VTDPERQEAVLEDPYILLVSSKVST---------VKD--------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKI 265 (546)
T ss_dssp CSBTTTTBEEEESCEEEEBSSEECC---------STT--------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHH
T ss_pred ccCcccCeeEecccEEEEECCccCC---------HHH--------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 78999999999999997652 222 2356899999999999999999999999999654
Q ss_pred --C---EEEE-----ccChhHHHHHHHHhCCeEee-----ecccccCCccccccceEEEEEEecCCcEEEEEecCCCCC-
Q psy18037 280 --I---TLVL-----NVKTTVLERIARCTRADLVY-----SVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPH- 343 (1390)
Q Consensus 280 --I---~vv~-----nVK~~~LeRIAr~TgA~Ii~-----Sid~~l~~~~LG~c~~f~v~~~~~~~kt~i~fegc~~~~- 343 (1390)
| .+|+ +.++.+|+|||++|||.+++ +++ .++...||+|+.|++ +.+.+++|+||.++.
T Consensus 266 rg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~-~~~~~~LG~a~~v~i-----~~d~~~~i~g~~~~~~ 339 (546)
T 3rtk_A 266 RGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLE-NADLSLLGKARKVVV-----TKDETTIVEGAGDTDA 339 (546)
T ss_dssp HSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCST-TCCTTTSEEEEEEEE-----CSSCEEEEEECSCHHH
T ss_pred CCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccc-cCCHhhCCeeEEEEE-----cCCeEEEEcCCCCHHH
Confidence 4 4443 33578999999999999999 688 788999999999984 778999999998421
Q ss_pred ---------------------------------CeEEEEEecCCHHHHHHHHHHHHHHHHHHHH------------HHHH
Q psy18037 344 ---------------------------------KGSTVILRGASRKELMKVKRVTSFMIYVLYN------------WKLE 378 (1390)
Q Consensus 344 ---------------------------------~g~TIlLRG~s~~~L~evKr~l~dal~vv~n------------~~LE 378 (1390)
..|||+|||+|+.+|+|.||.++||++++++ .+++
T Consensus 340 i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~ 419 (546)
T 3rtk_A 340 IAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQ 419 (546)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHT
T ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHH
Confidence 2799999999999999999999999999998 4555
Q ss_pred HHHHHHHhh
Q psy18037 379 SSLLMDEQA 387 (1390)
Q Consensus 379 ~s~~ld~~a 387 (1390)
++..+++++
T Consensus 420 ~s~~L~~~~ 428 (546)
T 3rtk_A 420 AAPTLDELK 428 (546)
T ss_dssp TGGGSTTSC
T ss_pred HHHHHHHhc
Confidence 666555554
No 31
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=94.89 E-value=0.0029 Score=74.94 Aligned_cols=41 Identities=27% Similarity=0.496 Sum_probs=31.9
Q ss_pred HHHhhhhhhhhh-cccCCCCCCcccccCchHHHHhhhccccc
Q psy18037 1208 SFIRSLSRCIRW-EARGGKSGSNFCKTKDDRFILKEMSRLEK 1248 (1390)
Q Consensus 1208 ~~~~Sl~r~~~~-~~~~gksgs~f~~t~d~~~~~~e~~~~~~ 1248 (1390)
+|++||++|-.| .++|||||+.|.+|.|++|++|.|++.|.
T Consensus 100 dy~~Sl~~~~~~~~~s~GKSGs~F~~T~D~rfiIKti~~~E~ 141 (394)
T 2ybx_A 100 DFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDV 141 (394)
T ss_dssp HHHHHHHSSCCEECC-----CCCEEECTTSSEEEEEECHHHH
T ss_pred HHHHHhcCCCccccCCCCCccCEEEEeCCCcEEEEeeCHHHH
Confidence 488899999887 58999999999999999999999997654
No 32
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=93.99 E-value=0.0069 Score=71.73 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=30.7
Q ss_pred HHHhhhhhhhhhcccCCCCCCcccccCchHHHHhhhccccc
Q psy18037 1208 SFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEK 1248 (1390)
Q Consensus 1208 ~~~~Sl~r~~~~~~~~gksgs~f~~t~d~~~~~~e~~~~~~ 1248 (1390)
+|++||++|..|+ +||||| .|.+|.|++|++|.|++.|.
T Consensus 92 dy~~Sl~~~~~~~-s~GKSG-~F~~T~D~rfiIKti~~~E~ 130 (392)
T 2gk9_A 92 DYLVSLTRNPPSE-SEGSDG-RFLISYDRTLVIKEVSSEDI 130 (392)
T ss_dssp HHHHHHHSSCCCC-CC------CCCCTTSSEEEEECCHHHH
T ss_pred HHHHHhcCCCccc-CCCCcc-eEEEcCCCcEEEEeeCHHHH
Confidence 4788999999999 999999 99999999999999997664
No 33
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=92.62 E-value=1 Score=47.88 Aligned_cols=115 Identities=20% Similarity=0.227 Sum_probs=78.4
Q ss_pred eeEEeEEEeeccCCC-------CCcceecCCcEEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q psy18037 191 FVVSGIVHSKNVSHK-------SMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLV 263 (1390)
Q Consensus 191 ~lI~GvV~~Kn~ahk-------~M~~~i~nprIlLL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv 263 (1390)
+++.|+-|++..... +|.-.++||.|||.+-. ++++..++ -+.+++...|--+++.
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK---------Is~i~~il--------P~LE~~~~~~kpLlII 65 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK---------ISSLPDLL--------PLLEKVAGTGKPLLIV 65 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE---------ECCHHHHH--------HHHHHHHHHTCCEEEE
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc---------cCCHHHHH--------HHHHHHHHhCCCeEEE
Confidence 578899998875543 57778899999987633 34444332 2334444445447777
Q ss_pred cCCccHHHHHHHHH---cCCE---EEEcc-----ChhHHHHHHHHhCCeEee-----ecccccCCccccccceEEE
Q psy18037 264 QRNVARLAQESLQQ---LGIT---LVLNV-----KTTVLERIARCTRADLVY-----SVDVLLNQIHLGTCSRFSV 323 (1390)
Q Consensus 264 ~k~Vs~~A~~~L~~---~GI~---vv~nV-----K~~~LeRIAr~TgA~Ii~-----Sid~~l~~~~LG~c~~f~v 323 (1390)
-..|.+-|+..|.= +|.. +|+-- .+..|+-||-+|||.+++ +++ .++...||+|+.+.+
T Consensus 66 AedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le-~~~~~~LG~a~~v~v 140 (194)
T 3m6c_A 66 AEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLR-EVGLEVLGSARRVVV 140 (194)
T ss_dssp ESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG-GCCGGGCEEEEEEEE
T ss_pred ecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccc-cCCHHHCCCccEEEE
Confidence 78999999986643 3433 33322 255799999999999996 334 456789999998877
No 34
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=92.41 E-value=0.33 Score=49.33 Aligned_cols=102 Identities=17% Similarity=0.281 Sum_probs=70.0
Q ss_pred CCCcceecCCcEEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHH---cCCE
Q psy18037 205 KSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQ---LGIT 281 (1390)
Q Consensus 205 k~M~~~i~nprIlLL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~---~GI~ 281 (1390)
.+|.-.++||.|+|.+-. +++++.++ -+.++++..|--+++.-..|.+-|+..|.- +|..
T Consensus 18 e~m~~~le~p~ILitdkK---------Is~i~~ll--------P~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 18 ETMEAVLEDAFILIVEKK---------VSNVRELL--------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp TTTBEEEEEEEEEEESSE---------ECCHHHHH--------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred cccEEEeeccEEEEeccc---------ccCHHHHH--------HHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 367788899999997633 44444333 344455665555888888999999987653 3333
Q ss_pred ---EEEcc-----ChhHHHHHHHHhCCeEeee-----cccccCCccccccceEEEE
Q psy18037 282 ---LVLNV-----KTTVLERIARCTRADLVYS-----VDVLLNQIHLGTCSRFSVK 324 (1390)
Q Consensus 282 ---vv~nV-----K~~~LeRIAr~TgA~Ii~S-----id~~l~~~~LG~c~~f~v~ 324 (1390)
+|+-- .+..|+-||-.|||.+++. ++ .++...||+|+.+.+.
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le-~~~~~~LG~a~~v~vt 135 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLE-NATLSMLGRAERVRIT 135 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGG-GCCGGGCEEEEEEEEC
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccc-cCCHhHCCccCEEEEc
Confidence 23222 3567999999999999963 23 3456789999988874
No 35
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=90.59 E-value=5.5 Score=42.55 Aligned_cols=111 Identities=23% Similarity=0.344 Sum_probs=75.6
Q ss_pred eEEEeeccCC-------CCCcceecCCcEEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc
Q psy18037 195 GIVHSKNVSH-------KSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNV 267 (1390)
Q Consensus 195 GvV~~Kn~ah-------k~M~~~i~nprIlLL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~V 267 (1390)
|+-|++.... ++|.-.++||.|||.+-.|. ++..++ -+.++++..+--++++-..|
T Consensus 14 ~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs---------~i~~il--------P~LE~v~~~~rpLlIIAEDv 76 (201)
T 3osx_A 14 GMQFDRGYLSPYFINKPESGSVELENPYILLVDKKIS---------NIRELL--------PVLEGVAKASKPLVIIAEDV 76 (201)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEEC---------CHHHHH--------HHHHHHHTSSCCEEEEEEEE
T ss_pred ccEecCccCChheeecccCCEEEecCCeEEEEcCccC---------CHHHHH--------HHHHHHHHhCCCeEEEeccc
Confidence 6777776543 36777899999999885443 333322 34455666665577777899
Q ss_pred cHHHHHHHHH---cCCEEEEccC--------hhHHHHHHHHhCCeEeee-----cccccCCccccccceEEE
Q psy18037 268 ARLAQESLQQ---LGITLVLNVK--------TTVLERIARCTRADLVYS-----VDVLLNQIHLGTCSRFSV 323 (1390)
Q Consensus 268 s~~A~~~L~~---~GI~vv~nVK--------~~~LeRIAr~TgA~Ii~S-----id~~l~~~~LG~c~~f~v 323 (1390)
.+-|+..|.= +|+.-+.-|| +..|+-||-+|||.+++. ++ .++...||+|+.+.+
T Consensus 77 egEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le-~~~~~~LG~a~~V~v 147 (201)
T 3osx_A 77 EGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELE-KATLEDLGQAKRVVI 147 (201)
T ss_dssp CHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG-GCCGGGCEEEEEEEE
T ss_pred cchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccc-cCCHhhCCCccEEEE
Confidence 9999986643 3433222232 456999999999999963 33 456789999998877
No 36
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=88.53 E-value=0.39 Score=54.49 Aligned_cols=86 Identities=19% Similarity=0.231 Sum_probs=65.0
Q ss_pred HHHHhhhcccccccCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEEEEEccC
Q psy18037 1253 FIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNN 1332 (1390)
Q Consensus 1253 fi~SL~~~~~~~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~ 1332 (1390)
|++++.+...|..-+|=.|. +...++..|+|-.+..|.++...+.++ ....++++++|...+ .
T Consensus 7 ~~~~~~~~~~~~QvaGH~g~--~~~~~~G~i~Kp~~~~E~~fYe~l~~~-----------~L~~fvP~y~G~~~~--~-- 69 (289)
T 2aqx_A 7 FVMSFKKKYPWIQLAGHAGS--FKAAANGRILKKHCESEQRCLDRLMAD-----------VLRPFVPAYHGDVVK--D-- 69 (289)
T ss_dssp SEEEEEEEEECCCCSSCTTS--EEECSTTEEEEECCHHHHHHHHHHTTS-----------TTGGGSCCEEEEEEE--T--
T ss_pred cccccccCCCcEEeeCCCCc--ceECCCCEEEeeCcHHHHHHHHHHhhh-----------hhHHhCchheEeecc--C--
Confidence 56677777889999999987 333456668999999999887776542 345789999998654 2
Q ss_pred CCCceEEEEEEeccCCCCCceeEEEec
Q psy18037 1333 NSKTRSNLLVMENLFHSRNIKLRFDLK 1359 (1390)
Q Consensus 1333 ~~~~k~~~iVMeNlf~~~~i~~~yDLK 1359 (1390)
...+|+||||-++-.-=-+-|||
T Consensus 70 ----~~~~i~LEDLt~gf~~PcVmDiK 92 (289)
T 2aqx_A 70 ----GERYNQMDDLLADFDSPCVMDCK 92 (289)
T ss_dssp ----TEEEEEEECTTTTCSSCEEEEEE
T ss_pred ----CceEEEehhhhcCCCCceEEEEe
Confidence 24799999999986444578998
No 37
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=76.94 E-value=4 Score=45.98 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=58.1
Q ss_pred cccccCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEEEEEccCCCCceEEEE
Q psy18037 1262 RWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLL 1341 (1390)
Q Consensus 1262 ~~~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~~~k~~~i 1341 (1390)
+|..-+|=.|.+... .|+..|+|-.+..|.++...+.++ ....++++++|...+ . ...+|
T Consensus 2 ~~~QvaGH~g~l~~~-~~~g~i~Kp~~~~E~~fY~~l~~~-----------~L~~fvP~y~G~~~~--~------~~~~i 61 (276)
T 1w2f_A 2 SWVQLAGHTGSFKAA-GTSGLILKRCSEPERYCLARLMAD-----------ALRGCVPAFHGVVER--D------GESYL 61 (276)
T ss_dssp CHHHHTTCCSCCEEC-SSTTEEEEECCHHHHHHHHHHHTS-----------GGGGGSCCEEEEEEE--T------TEEEE
T ss_pred CCeEEeCCCCceeec-CCCCEEEeeCCHHHHHHHHHhhhh-----------hHHHhChhhheeecc--C------CceEE
Confidence 577778888875544 377789999999999888876542 234678999998553 2 24799
Q ss_pred EEeccCCCCCceeEEEec
Q psy18037 1342 VMENLFHSRNIKLRFDLK 1359 (1390)
Q Consensus 1342 VMeNlf~~~~i~~~yDLK 1359 (1390)
+||||-++-.-=-+-|||
T Consensus 62 ~LEdLt~gf~~PcVmDiK 79 (276)
T 1w2f_A 62 QLQDLLDGFDGPCVLDCK 79 (276)
T ss_dssp EEECTTTTCSSCEEEEEE
T ss_pred EechHhcCCCCceEEEEE
Confidence 999999986433478888
No 38
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=67.91 E-value=8.7 Score=37.43 Aligned_cols=54 Identities=26% Similarity=0.306 Sum_probs=45.7
Q ss_pred HHHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeE
Q psy18037 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADL 302 (1390)
Q Consensus 248 ~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~I 302 (1390)
.+.+.|...++++|+|. +|..-|...|.++||.++.-.....-+.|.+...+.+
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~L 107 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGKL 107 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 56677778999999997 6999999999999999998777777788888776653
No 39
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=67.41 E-value=9 Score=38.44 Aligned_cols=55 Identities=18% Similarity=0.316 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEe
Q psy18037 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLV 303 (1390)
Q Consensus 248 ~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii 303 (1390)
.+++.|.+.++++|||. +|..-|...|.++||.++.-....+-+.|.+...+.+.
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~L~ 121 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQLK 121 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC--
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCCCC
Confidence 45667778999999996 69999999999999999988777777888888776543
No 40
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=64.25 E-value=8.3 Score=45.13 Aligned_cols=92 Identities=17% Similarity=0.170 Sum_probs=48.6
Q ss_pred cCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhh--hccCCCCceeeeeeeeEEEEEccC-----------
Q psy18037 1266 RGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKN--CFENSSPTLLCKIFGVFRVICQNN----------- 1332 (1390)
Q Consensus 1266 ~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~--~~~~~~~TlL~ki~G~y~i~~~~~----------- 1332 (1390)
-+|=.| ++...|+.+|+|-.+..|+++...+...=+..-.. ........++++++|+..+.....
T Consensus 14 VaGH~g--~l~~~dg~~i~Kp~~~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~~~~~~~~~~~~~~~~~ 91 (363)
T 2iew_A 14 AAGHDG--TLTDGDGLLIFKPAFPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNEGAKIEQSGDAALLKID 91 (363)
T ss_dssp --------------CCEEEEECCHHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC----------------
T ss_pred ccCCcc--eeEcCCCCEEeCcCChHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEecccccccccchhhcccc
Confidence 356656 45556899999999999999887765321100000 001234578899999988764211
Q ss_pred -----------C-C--Cc-eEEEEEEeccCCCCCceeEEEec
Q psy18037 1333 -----------N-S--KT-RSNLLVMENLFHSRNIKLRFDLK 1359 (1390)
Q Consensus 1333 -----------~-~--~~-k~~~iVMeNlf~~~~i~~~yDLK 1359 (1390)
. + .. ...+||||||-++-.-=-+-|||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~gf~~PcVlDiK 133 (363)
T 2iew_A 92 ERLSDSTDNLDSIPVKSEKSKQYLVLENLLYGFSKPNILDIK 133 (363)
T ss_dssp -------------------CCEEEEEECTTTTCSSEEEEEEE
T ss_pred cccccCccchhcccccCCCCccEEEechhhcCCCCceEEEEE
Confidence 0 0 00 34799999999986444578998
No 41
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=63.30 E-value=12 Score=36.56 Aligned_cols=54 Identities=24% Similarity=0.234 Sum_probs=44.7
Q ss_pred HHHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeE
Q psy18037 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADL 302 (1390)
Q Consensus 248 ~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~I 302 (1390)
.+.+.|...++++|+|. +|..-|...|.++||.++.-.....-+.|.+...+.+
T Consensus 56 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~L 109 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGNL 109 (124)
T ss_dssp THHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCCC
Confidence 34566778999999997 5999999999999999999877777778887777653
No 42
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=60.51 E-value=11 Score=36.71 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=44.7
Q ss_pred HHHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccCh-hHHHHHHHHhCCeE
Q psy18037 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKT-TVLERIARCTRADL 302 (1390)
Q Consensus 248 ~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~-~~LeRIAr~TgA~I 302 (1390)
...+.|...++++|+|. +|..-|...|.++||.++.-... ..-+.|.+...+.+
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g~L 112 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDGQV 112 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcCCC
Confidence 45667777999999997 69999999999999999997776 67777777766644
No 43
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=55.78 E-value=17 Score=40.51 Aligned_cols=62 Identities=19% Similarity=0.216 Sum_probs=47.3
Q ss_pred CCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEEEEEccCCCCceEEEEEEeccCCCCCceeEEEe
Q psy18037 1279 DDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDL 1358 (1390)
Q Consensus 1279 D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~~~k~~~iVMeNlf~~~~i~~~yDL 1358 (1390)
|+..|+|-.+..|.+++..+.+. ....++++++|.... . ...+|+||||-++-.-=-+=||
T Consensus 1 ~~g~i~K~~~~~E~~fY~~l~~~-----------~L~~fvP~y~G~~~~--~------~~~~i~LEdLt~g~~~PcVmDi 61 (259)
T 2a98_A 1 EDGRILKRFCQCEQRSLEQLMKD-----------PLRPFVPAYYGMVLQ--D------GQTFNQMEDLLADFEGPSIMDC 61 (259)
T ss_dssp CCSEEEEECCHHHHHHHHHHTTS-----------TTGGGSCCEEEEEEE--T------TEEEEEEECTTTTCSSCEEEEE
T ss_pred CCCEEeccCCHHHHHHHHHhhhh-----------hHHHhCcCceEEEEE--C------CceEEEeehHhcCCCCceEEEE
Confidence 46789999999999988776531 345789999998653 2 2479999999998643347899
Q ss_pred c
Q psy18037 1359 K 1359 (1390)
Q Consensus 1359 K 1359 (1390)
|
T Consensus 62 K 62 (259)
T 2a98_A 62 K 62 (259)
T ss_dssp E
T ss_pred E
Confidence 9
No 44
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=49.37 E-value=12 Score=36.13 Aligned_cols=52 Identities=25% Similarity=0.273 Sum_probs=43.8
Q ss_pred HHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCe
Q psy18037 249 VVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRAD 301 (1390)
Q Consensus 249 ~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~ 301 (1390)
+.+.|...++++|+|. +|..-|...|.++||.++.-.....-+.|.+...+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4556678999999997 599999999999999999987777778888877765
No 45
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=48.39 E-value=26 Score=35.00 Aligned_cols=52 Identities=2% Similarity=0.059 Sum_probs=42.7
Q ss_pred HHHHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCe
Q psy18037 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRAD 301 (1390)
Q Consensus 248 ~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~ 301 (1390)
.+.+.|...++++|||. +|..-|...|.+ ||.++.-....+-+.|.+...+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 45666677899999996 699999999999 99999987766777777777665
No 46
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=47.06 E-value=25 Score=39.55 Aligned_cols=51 Identities=18% Similarity=0.323 Sum_probs=39.6
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccC----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVK----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK----~~~LeRIAr~TgA 300 (1390)
+++|++++|||||.......-..+.|.+.|++++.... ...++.|++.+|.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~ 143 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 143 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCC
Confidence 45788999999999776677778889999988877543 2356788888875
No 47
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=45.56 E-value=25 Score=39.70 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=39.6
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEcc-C-------------------------hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNV-K-------------------------TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nV-K-------------------------~~~LeRIAr~TgA 300 (1390)
+++|++++||+||.......-..+.|.+.||.++.-- . ...++.|++.+|.
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~ 153 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEK 153 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCC
Confidence 3578899999999876666667788999999977532 1 2568899999985
No 48
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=43.94 E-value=33 Score=37.18 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=36.8
Q ss_pred HHHHHhcCCCEEEecCC-ccHHHHHHHHHcCCEEEEc-c---Chh----HHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRN-VARLAQESLQQLGITLVLN-V---KTT----VLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~-Vs~~A~~~L~~~GI~vv~n-V---K~~----~LeRIAr~TgA 300 (1390)
+++|++++||+||+... ...-..+.|.+.||.++.- - ... .++.|++.+|.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQV 111 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 45788999999998764 4566778899999976542 1 222 46778888874
No 49
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=43.54 E-value=26 Score=40.13 Aligned_cols=51 Identities=18% Similarity=0.226 Sum_probs=37.4
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEc-cC----------hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLN-VK----------TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~n-VK----------~~~LeRIAr~TgA 300 (1390)
+++|++++|||||+...-...+.+++.+.||.++.- .. ...++.|++.+|.
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~ 150 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGR 150 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCC
Confidence 567889999999987654456677888999986643 11 3457788888885
No 50
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=42.96 E-value=6.7 Score=38.72 Aligned_cols=16 Identities=13% Similarity=0.511 Sum_probs=14.8
Q ss_pred ChhhhcccCCcceecc
Q psy18037 1 MIAQALFDSEYIKCIS 16 (1390)
Q Consensus 1 ~i~qal~~~~~~~~v~ 16 (1390)
+|||+|++.|+|++|.
T Consensus 61 ~lgq~Ll~~G~i~hV~ 76 (120)
T 1v3f_A 61 TLASMLMEENFLRPVG 76 (120)
T ss_dssp HHHHHHHHHTSEEECS
T ss_pred HHHHHHHHCCCeEEcc
Confidence 3899999999999996
No 51
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=42.94 E-value=7.7 Score=45.79 Aligned_cols=44 Identities=9% Similarity=-0.130 Sum_probs=30.4
Q ss_pred hhhhcccCCcceeccCCCCccCCCC--CCcCcccccccCCCCCCCCc
Q psy18037 2 IAQALFDSEYIKCISGPGSGAGDSK--FSLDALYTIVCQDEEESSPV 46 (1390)
Q Consensus 2 i~qal~~~~~~~~v~~~~~f~~d~~--~~~~~~~~~~~~~~~e~~~~ 46 (1390)
+||+|++.|||.+|.++..|. |++ .-.|....+..+-.+=|.|.
T Consensus 64 ~g~~Ll~~G~i~hv~~~~~F~-d~~~y~f~~~~~~~~~~s~~~~~~~ 109 (385)
T 3ml6_A 64 YASGLLKAGLIRHTVNKITFS-EQCYYVFGDLSGGPRPYSPQPPPYH 109 (385)
T ss_dssp HHHHHHHHSSEEESSSCSSCC-SSSEEEECCCCC------CCCCCCE
T ss_pred HHHHHHhCCcEEEcCCcceec-CcceEEeeccccccCccCCCCCCch
Confidence 799999999999998888999 987 33444555555566666774
No 52
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=42.38 E-value=38 Score=37.40 Aligned_cols=51 Identities=16% Similarity=0.281 Sum_probs=37.7
Q ss_pred HHHHHhcCCCEEEecCCc-cHHHHHHHHHcCCEEEEc-c--C----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNV-ARLAQESLQQLGITLVLN-V--K----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~V-s~~A~~~L~~~GI~vv~n-V--K----~~~LeRIAr~TgA 300 (1390)
+++|++++||+||+.... ..-..+.|.+.||.++.- - . ...++.|++.+|.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 356899999999997653 456678899999987643 1 1 2457888888885
No 53
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=41.43 E-value=19 Score=39.15 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=37.7
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEE-ccC-----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVL-NVK-----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~-nVK-----~~~LeRIAr~TgA 300 (1390)
+++|++++||+||+.........+.|.+.||.++. ... ...++.|++.+|.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 35688899999999876666677889999987543 322 2357788888885
No 54
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=37.06 E-value=46 Score=35.99 Aligned_cols=51 Identities=20% Similarity=0.301 Sum_probs=38.0
Q ss_pred HHHHHhcCCCEEEecCCcc-HHHHHHHHHcCCEEEEcc---C----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVA-RLAQESLQQLGITLVLNV---K----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs-~~A~~~L~~~GI~vv~nV---K----~~~LeRIAr~TgA 300 (1390)
+++|++++||+||+..... .-..+.|.+.||.++.-- . ...++.|++.+|.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQ 110 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999987764 456678999999876431 1 2347888999985
No 55
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=35.81 E-value=34 Score=36.79 Aligned_cols=35 Identities=40% Similarity=0.609 Sum_probs=27.8
Q ss_pred HHHHHhcCCCEEEecC-CccHHHHHHHHHcCCEEEE
Q psy18037 250 VARISALKPDIVLVQR-NVARLAQESLQQLGITLVL 284 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k-~Vs~~A~~~L~~~GI~vv~ 284 (1390)
+++|++++||+||+.. +.+.-..+.|.+.||.++.
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~ 85 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMW 85 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEE
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEE
Confidence 4578889999999863 4566677889999998774
No 56
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=32.78 E-value=52 Score=37.33 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=36.6
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEc-cC-----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLN-VK-----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~n-VK-----~~~LeRIAr~TgA 300 (1390)
+++|++++|||||.... ..-..+.|.+.||.++.- .. ...++.|++.+|.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 164 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNN 164 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999776 344566789999987653 21 2356788888874
No 57
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=31.88 E-value=71 Score=30.04 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=41.2
Q ss_pred HHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeE
Q psy18037 251 ARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADL 302 (1390)
Q Consensus 251 ~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~I 302 (1390)
+.|...++++|+|. +|..-|...|.++ |.++.......-+.|.+...+.+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g~L 99 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEGEL 99 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTTCS
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcCCC
Confidence 45566899999995 6999999999999 99999777777777777766644
No 58
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=31.08 E-value=14 Score=35.95 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=18.4
Q ss_pred ChhhhcccCCcceeccC----------CCCcc
Q psy18037 1 MIAQALFDSEYIKCISG----------PGSGA 22 (1390)
Q Consensus 1 ~i~qal~~~~~~~~v~~----------~~~f~ 22 (1390)
.+||+|++.|||.+|.+ +..|.
T Consensus 61 ~lgq~Ll~~G~i~hV~d~~~~~~~~~~~~~F~ 92 (109)
T 1uhw_A 61 MISASLLSEGYLQPAGDLSKNAADGIAENPFL 92 (109)
T ss_dssp HHHHHHHHHTSSEECSSSHHHHHHHSSSCCCC
T ss_pred HHHHHHHHCCeEEeCcccccccccccccccee
Confidence 37999999999999943 66777
No 59
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=30.38 E-value=11 Score=42.53 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=30.1
Q ss_pred ccCCCCCCceeeecCCceEEeccCH-----HHHHHHHHhhHH--HHHHHhhhccCCCCceeeeeeeeEEEEEccCCCCce
Q psy18037 1265 ARGGKSGSNFCKTKDDRFILKEMSR-----LEMDSFLTFAPN--YYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTR 1337 (1390)
Q Consensus 1265 ~~gGKSgs~F~~T~D~rfiiKtis~-----~E~~~fl~~~p~--Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~~~k 1337 (1390)
+.+|+.|.+. ..++ .|+|-+.. .|+++..++..+ .... ....+++++|...+.-.+ .
T Consensus 4 ~~~Gh~G~l~--~~~G-~v~KP~~~~~rg~~E~~FYe~l~~~~~~~~~--------L~~fvP~y~G~~~~~~~~-----~ 67 (275)
T 4frf_A 4 MKDGKPGPLV--DDKG-RFFKPLQGDSRGEIEVKFYESFSSNTEVPEH--------IHRYFPVYHGTQAVEGSD-----G 67 (275)
T ss_dssp -----------------------------CCHHHHHHHHHHCTTSCHH--------HHTTSCCBCCC-------------
T ss_pred CCCCCCCceE--CCCC-cEEeecCCCCcchHHHHHHHHHhhCCCchHH--------HHhhCcCCceeEEecCCC-----C
Confidence 4578888653 3445 57898875 688776654211 0000 123479999998875443 3
Q ss_pred EEEEEEeccCCCCCceeEEEec
Q psy18037 1338 SNLLVMENLFHSRNIKLRFDLK 1359 (1390)
Q Consensus 1338 ~~~iVMeNlf~~~~i~~~yDLK 1359 (1390)
..+||||||-++-.-=-+=|||
T Consensus 68 ~~~i~LEdLt~gf~~PcVlDiK 89 (275)
T 4frf_A 68 AAMMVLENLLAEYTKPSVMDVK 89 (275)
T ss_dssp --CCCBCCGGGGCSSEEEEEEE
T ss_pred ccEEEEeecccccCCCceeEee
Confidence 4689999998876433457888
No 60
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=28.91 E-value=52 Score=36.61 Aligned_cols=50 Identities=16% Similarity=0.345 Sum_probs=35.9
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccC--------hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVK--------TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK--------~~~LeRIAr~TgA 300 (1390)
+++|++++||+||... ...-..+.|.+.|.+++.... ...++.|++.+|-
T Consensus 88 ~E~i~~l~PDlIi~~~-~~~~~~~~L~~~~p~v~~~~~~~~~~~~~~~~i~~lg~~~g~ 145 (303)
T 3gfv_A 88 FDKVAELDPDLIIISA-RQSESYKEFSKIAPTIYLGVDTAKYMESFKSDAETIGKIFDK 145 (303)
T ss_dssp HHHHHHTCCSEEEECG-GGGGGHHHHHHHSCEEECCCCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCEEEEcC-cchhHHHHHHhhCCEEEEcCCCcchHHHHHHHHHHHHHHhCC
Confidence 4678999999999864 344556778888877766543 2446788888874
No 61
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=28.08 E-value=16 Score=36.39 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=18.3
Q ss_pred ChhhhcccCCcceec----------cCCCCcc
Q psy18037 1 MIAQALFDSEYIKCI----------SGPGSGA 22 (1390)
Q Consensus 1 ~i~qal~~~~~~~~v----------~~~~~f~ 22 (1390)
.+||+|++.|||.+| .++..|.
T Consensus 71 ~lg~~Ll~~G~i~hV~d~s~~~~~~~~~~~f~ 102 (127)
T 2cso_A 71 MIASSLLNEGYLQPAGDMSKSAVDGTAENPFL 102 (127)
T ss_dssp HHHHHHHHHTSSEEESHHHHHHHHSSCSCCCC
T ss_pred HHHHHHHHCCeEEeCcccccccccccccccee
Confidence 379999999999999 4566676
No 62
>3ts3_A Capsid polyprotein; virus protein, projection domain, astrovirus capsid, viral P; 1.49A {Turkey astrovirus 2}
Probab=26.38 E-value=20 Score=36.79 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=20.7
Q ss_pred cccccCCCCCCceeeecCCceEEe
Q psy18037 1262 RWEARGGKSGSNFCKTKDDRFILK 1285 (1390)
Q Consensus 1262 ~~~~~gGKSgs~F~~T~D~rfiiK 1285 (1390)
......|+-+++||+|.|+||||=
T Consensus 145 smgdt~Grraalfyrtsder~ill 168 (208)
T 3ts3_A 145 SMGDTNGRRAALFYRTSDEKYILF 168 (208)
T ss_dssp EEEETTCCEEEEEEETTTTEEEEE
T ss_pred eecccCCceeeeeeeccCceEEEE
Confidence 345678999999999999999984
No 63
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=26.26 E-value=63 Score=35.82 Aligned_cols=50 Identities=20% Similarity=0.343 Sum_probs=36.6
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccC--------hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVK--------TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK--------~~~LeRIAr~TgA 300 (1390)
+++|++++||+||....- .-..+.|.+.|.+++.... ...++.|++.+|.
T Consensus 88 ~E~i~~l~PDLIi~~~~~-~~~~~~L~~~~p~v~~~~~~~~~~~~~~~~i~~lg~~~g~ 145 (296)
T 2chu_A 88 FEAINALKPDLIIISGRQ-SKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGL 145 (296)
T ss_dssp HHHHHHTCCSEEEECTTT-GGGHHHHHTTSCEEECCCCTTSHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCCEEEEcCcc-HHHHHHHHhhCCEEEEecCCccchHHHHHHHHHHHHHhCc
Confidence 567899999999986543 3445678888988775542 2467888888885
No 64
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=25.48 E-value=1.3e+02 Score=29.14 Aligned_cols=61 Identities=15% Similarity=0.221 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcCCCEEEecC-------CccHHHHHHHHHcCCE----EEEccC--hhHHHHHHHHhCCeEeeec
Q psy18037 246 LRNVVARISALKPDIVLVQR-------NVARLAQESLQQLGIT----LVLNVK--TTVLERIARCTRADLVYSV 306 (1390)
Q Consensus 246 L~~~V~rI~~~~pnVVlv~k-------~Vs~~A~~~L~~~GI~----vv~nVK--~~~LeRIAr~TgA~Ii~Si 306 (1390)
++..|+++++.++=+|++.. .-+..|.++|.+.||. ...+|. +...+.+.+.+|..-++.+
T Consensus 5 ~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~v 78 (121)
T 3gx8_A 5 IRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQL 78 (121)
T ss_dssp HHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeE
Confidence 46788889998876666543 2578899999999996 345563 3455777777886544433
No 65
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=24.74 E-value=43 Score=37.30 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=37.9
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccCh----hHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKT----TVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~----~~LeRIAr~TgA 300 (1390)
+++|++++|||||.......-..+.|.+-+++++..-.. ..++.|++.+|.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~l~~i~p~v~~~~~~~~~~~~i~~lg~~~g~ 143 (303)
T 3tny_A 89 VETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNK 143 (303)
T ss_dssp HHHHHHTCCSEEEEEHHHHGGGHHHHHTTSCEEEECCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCEEEEeccchHHHHHHhhcCCcEEEeccCcccHHHHHHHHHHHhCc
Confidence 356889999999987665555667788888888765432 357788888874
No 66
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.98 E-value=20 Score=34.47 Aligned_cols=16 Identities=19% Similarity=0.420 Sum_probs=14.8
Q ss_pred hhhhcccCCcceeccC
Q psy18037 2 IAQALFDSEYIKCISG 17 (1390)
Q Consensus 2 i~qal~~~~~~~~v~~ 17 (1390)
|||+|+|+|+|++|..
T Consensus 72 lgq~Ll~~gvi~hV~~ 87 (105)
T 2ysr_A 72 LLRKFLKNHVIEDIKG 87 (105)
T ss_dssp HHHHHHHTTSSEESSC
T ss_pred HHHHHHHCCCeEeccC
Confidence 7999999999999964
No 67
>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, T protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A*
Probab=22.15 E-value=84 Score=34.63 Aligned_cols=51 Identities=24% Similarity=0.382 Sum_probs=36.3
Q ss_pred HHHHHhcCCCEEEecCCccHHHHHHHHHcCCEEEEccCh-------hHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKT-------TVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~GI~vv~nVK~-------~~LeRIAr~TgA 300 (1390)
+++|++++||+||+......-..+-|.+.+-+++..... ..++.|++.+|.
T Consensus 78 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~~p~v~~~~~~~~~~~~~~~i~~lg~~~g~ 135 (296)
T 3lhs_A 78 LEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNK 135 (296)
T ss_dssp HHHHHHTCCSEEEEETTTTTTTHHHHHHHSCEEEECSTTCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 468899999999997665555556788887776665531 233478888885
No 68
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=21.92 E-value=84 Score=34.97 Aligned_cols=51 Identities=18% Similarity=0.265 Sum_probs=36.9
Q ss_pred HHHHHhcCCCEEEecCCc---cHHHHHHHHHcCCEEEEccC----hhHHHHHHHHhCC
Q psy18037 250 VARISALKPDIVLVQRNV---ARLAQESLQQLGITLVLNVK----TTVLERIARCTRA 300 (1390)
Q Consensus 250 V~rI~~~~pnVVlv~k~V---s~~A~~~L~~~GI~vv~nVK----~~~LeRIAr~TgA 300 (1390)
+++|++++||+||+...- ..-..+.|.+.|-+++.... ...++.|++.+|.
T Consensus 79 ~E~I~al~PDLIi~~~~~~~~~~~~~~~L~~~~Pvv~~~~~~~~~~~~i~~lg~~lg~ 136 (305)
T 3r5t_A 79 LESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSDQTWQSLAQQLGLATGL 136 (305)
T ss_dssp HHHHHHHCCSEEEEESSSTTCCGGGHHHHHTTSCEEEECCTTSCHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEEecccccccHHHHHHHHHhCCEEEEcCCCcCHHHHHHHHHHHhCC
Confidence 467888999999997653 23445668998966665443 3468889999885
No 69
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=20.99 E-value=1.3e+02 Score=29.46 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCCEEEecC-------CccHHHHHHHHHcCCE--EEEcc--ChhHHHHHHHHhCCeEeeec
Q psy18037 247 RNVVARISALKPDIVLVQR-------NVARLAQESLQQLGIT--LVLNV--KTTVLERIARCTRADLVYSV 306 (1390)
Q Consensus 247 ~~~V~rI~~~~pnVVlv~k-------~Vs~~A~~~L~~~GI~--vv~nV--K~~~LeRIAr~TgA~Ii~Si 306 (1390)
++.|+++++-++=||+..+ ..+..|.++|.+.||. ...+| .+..-+.+.+.||.+-++.|
T Consensus 10 ~e~i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqI 80 (118)
T 2wul_A 10 AEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQV 80 (118)
T ss_dssp HHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhccCCCCCeE
Confidence 3567888888887777654 3578899999999984 44555 33445678888888655544
Done!