Query psy18038
Match_columns 146
No_of_seqs 152 out of 695
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 20:54:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18038.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18038hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00151 Lipase: Lipase; Inte 100.0 5.1E-45 1.1E-49 310.4 7.9 135 6-144 129-267 (331)
2 TIGR03230 lipo_lipase lipoprot 100.0 6.4E-40 1.4E-44 289.2 10.9 136 9-144 101-244 (442)
3 cd00707 Pancreat_lipase_like P 100.0 9.6E-39 2.1E-43 263.7 10.8 126 8-144 93-221 (275)
4 cd00741 Lipase Lipase. Lipase 99.0 1.6E-09 3.5E-14 81.1 8.9 116 3-120 6-127 (153)
5 PF12697 Abhydrolase_6: Alpha/ 96.0 0.015 3.2E-07 42.4 5.1 54 5-61 47-102 (228)
6 PLN02824 hydrolase, alpha/beta 95.8 0.021 4.6E-07 46.0 5.6 55 5-62 83-139 (294)
7 PRK11126 2-succinyl-6-hydroxy- 94.9 0.093 2E-06 40.4 6.3 53 5-59 47-101 (242)
8 PRK00870 haloalkane dehalogena 94.9 0.063 1.4E-06 43.6 5.6 54 6-62 97-152 (302)
9 PRK10673 acyl-CoA esterase; Pr 94.4 0.12 2.6E-06 40.0 5.8 53 5-60 62-116 (255)
10 PF00975 Thioesterase: Thioest 94.3 0.12 2.7E-06 39.8 5.8 60 3-63 44-107 (229)
11 PLN02965 Probable pheophorbida 94.2 0.11 2.3E-06 41.2 5.3 53 6-60 53-107 (255)
12 PRK03592 haloalkane dehalogena 93.3 0.2 4.3E-06 40.3 5.3 50 6-58 75-126 (295)
13 TIGR03611 RutD pyrimidine util 93.2 0.18 3.8E-06 38.1 4.7 52 6-60 62-115 (257)
14 PLN02679 hydrolase, alpha/beta 93.1 0.22 4.7E-06 42.3 5.5 54 6-61 137-192 (360)
15 TIGR03056 bchO_mg_che_rel puta 92.7 0.29 6.4E-06 37.9 5.4 52 6-60 77-130 (278)
16 PF02230 Abhydrolase_2: Phosph 92.0 1.5 3.2E-05 34.3 8.6 78 8-87 87-165 (216)
17 PRK08775 homoserine O-acetyltr 91.7 0.34 7.3E-06 40.5 5.0 53 6-60 119-173 (343)
18 TIGR02427 protocat_pcaD 3-oxoa 91.6 0.24 5.2E-06 36.8 3.6 52 6-60 61-114 (251)
19 TIGR02240 PHA_depoly_arom poly 91.5 0.37 7.9E-06 38.5 4.8 52 6-60 73-126 (276)
20 TIGR03695 menH_SHCHC 2-succiny 91.5 0.63 1.4E-05 34.3 5.8 53 5-59 50-104 (251)
21 PLN02578 hydrolase 91.5 0.43 9.4E-06 40.2 5.4 53 6-61 134-188 (354)
22 TIGR01250 pro_imino_pep_2 prol 91.2 0.83 1.8E-05 34.8 6.3 52 6-60 78-131 (288)
23 PRK10349 carboxylesterase BioH 91.1 0.42 9E-06 37.5 4.6 47 6-59 60-108 (256)
24 PF10230 DUF2305: Uncharacteri 90.4 0.51 1.1E-05 39.1 4.8 70 5-74 59-136 (266)
25 PRK11460 putative hydrolase; P 90.4 0.96 2.1E-05 36.2 6.3 40 18-58 95-136 (232)
26 PRK03204 haloalkane dehalogena 89.8 0.72 1.6E-05 37.6 5.1 52 6-60 83-136 (286)
27 TIGR01392 homoserO_Ac_trn homo 89.5 0.69 1.5E-05 38.8 5.0 53 5-60 107-162 (351)
28 TIGR01738 bioH putative pimelo 89.3 0.49 1.1E-05 35.1 3.5 48 6-60 51-100 (245)
29 PRK14875 acetoin dehydrogenase 89.3 0.93 2E-05 37.3 5.5 52 6-60 179-232 (371)
30 PF07819 PGAP1: PGAP1-like pro 89.2 1.2 2.6E-05 36.0 6.0 55 3-57 62-120 (225)
31 PLN02211 methyl indole-3-aceta 88.7 1.1 2.4E-05 36.6 5.5 54 5-60 67-122 (273)
32 TIGR03343 biphenyl_bphD 2-hydr 88.3 0.93 2E-05 35.6 4.7 48 10-60 87-136 (282)
33 PF00561 Abhydrolase_1: alpha/ 88.0 1.1 2.5E-05 33.3 4.7 50 7-59 27-78 (230)
34 PLN03084 alpha/beta hydrolase 87.7 1.2 2.5E-05 39.0 5.3 53 6-61 179-233 (383)
35 PF00326 Peptidase_S9: Prolyl 87.7 1.1 2.3E-05 34.6 4.6 36 7-42 45-81 (213)
36 PRK00175 metX homoserine O-ace 87.4 1.3 2.7E-05 38.0 5.3 53 6-61 128-183 (379)
37 PLN00021 chlorophyllase 87.2 1.1 2.3E-05 38.2 4.6 38 23-60 123-166 (313)
38 PRK10749 lysophospholipase L2; 87.1 2 4.3E-05 35.8 6.1 54 6-60 109-166 (330)
39 PLN02894 hydrolase, alpha/beta 86.9 2.1 4.5E-05 37.3 6.4 49 10-61 162-212 (402)
40 TIGR03101 hydr2_PEP hydrolase, 86.7 2.3 5E-05 35.5 6.4 50 9-61 84-135 (266)
41 PLN02385 hydrolase; alpha/beta 86.7 1.4 3E-05 36.9 5.1 54 6-60 138-197 (349)
42 PF05990 DUF900: Alpha/beta hy 85.8 1.5 3.2E-05 35.7 4.6 31 9-40 77-108 (233)
43 cd00519 Lipase_3 Lipase (class 85.7 3 6.5E-05 32.9 6.3 83 4-87 107-192 (229)
44 TIGR02821 fghA_ester_D S-formy 84.9 3.2 6.9E-05 33.8 6.2 33 9-41 120-154 (275)
45 PRK10566 esterase; Provisional 84.6 1.7 3.6E-05 33.9 4.3 28 14-41 94-123 (249)
46 PF07859 Abhydrolase_3: alpha/ 84.0 1.2 2.6E-05 33.9 3.2 47 13-59 54-109 (211)
47 PHA02857 monoglyceride lipase; 83.0 4.7 0.0001 31.9 6.3 36 23-59 94-131 (276)
48 smart00037 CNX Connexin homolo 82.6 0.66 1.4E-05 28.0 0.9 16 105-122 9-24 (34)
49 PF12695 Abhydrolase_5: Alpha/ 82.1 2.9 6.2E-05 29.3 4.3 33 24-58 59-93 (145)
50 PLN02298 hydrolase, alpha/beta 82.0 5 0.00011 33.0 6.3 53 7-60 111-169 (330)
51 PRK06765 homoserine O-acetyltr 81.1 2.5 5.4E-05 37.0 4.4 48 6-56 142-192 (389)
52 PF01764 Lipase_3: Lipase (cla 80.6 2.3 5E-05 30.4 3.4 62 25-86 63-130 (140)
53 PRK05077 frsA fermentation/res 80.5 4.6 9.9E-05 35.5 5.9 51 10-60 248-300 (414)
54 PRK06489 hypothetical protein; 80.2 3.6 7.9E-05 34.6 5.0 51 6-59 134-188 (360)
55 COG0596 MhpC Predicted hydrola 80.1 6 0.00013 28.3 5.5 51 8-61 72-124 (282)
56 PRK11071 esterase YqiA; Provis 79.7 6 0.00013 30.7 5.8 47 9-61 46-94 (190)
57 PLN02408 phospholipase A1 79.4 6.3 0.00014 34.9 6.4 82 5-87 178-265 (365)
58 KOG4409|consensus 79.3 2.4 5.2E-05 37.7 3.7 49 13-62 145-197 (365)
59 KOG2564|consensus 78.9 2.5 5.4E-05 37.0 3.6 56 4-60 123-182 (343)
60 PLN03087 BODYGUARD 1 domain co 78.4 5 0.00011 36.5 5.6 51 6-59 255-308 (481)
61 PRK07581 hypothetical protein; 77.5 3.9 8.4E-05 33.8 4.3 49 8-59 106-158 (339)
62 TIGR01249 pro_imino_pep_1 prol 77.1 5.1 0.00011 32.8 4.9 51 6-59 77-129 (306)
63 COG0400 Predicted esterase [Ge 77.0 7.5 0.00016 31.5 5.7 53 9-62 82-136 (207)
64 TIGR01840 esterase_phb esteras 76.1 7.4 0.00016 30.2 5.3 29 12-40 80-110 (212)
65 PLN02442 S-formylglutathione h 75.3 6.2 0.00013 32.5 4.9 36 23-59 140-177 (283)
66 KOG1454|consensus 71.7 11 0.00023 32.3 5.7 48 7-57 111-160 (326)
67 PRK10162 acetyl esterase; Prov 71.6 6.9 0.00015 32.8 4.4 23 18-40 146-169 (318)
68 PLN02454 triacylglycerol lipas 71.6 7.9 0.00017 34.9 5.0 36 6-42 207-245 (414)
69 PF05677 DUF818: Chlamydia CHL 71.5 7.6 0.00016 34.6 4.7 39 3-41 190-231 (365)
70 PLN02980 2-oxoglutarate decarb 70.4 7.8 0.00017 40.2 5.2 51 6-59 1427-1479(1655)
71 PF12740 Chlorophyllase2: Chlo 67.7 11 0.00023 32.0 4.7 56 5-60 65-131 (259)
72 PF05057 DUF676: Putative seri 67.0 6.8 0.00015 31.2 3.3 31 10-40 62-93 (217)
73 TIGR03100 hydr1_PEP hydrolase, 66.4 23 0.00051 28.7 6.4 50 9-59 83-133 (274)
74 PF07224 Chlorophyllase: Chlor 65.1 13 0.00028 32.3 4.8 60 4-63 93-160 (307)
75 TIGR01836 PHA_synth_III_C poly 64.0 16 0.00035 30.6 5.1 43 15-59 126-170 (350)
76 COG3319 Thioesterase domains o 63.7 17 0.00036 30.6 5.2 56 5-61 45-104 (257)
77 PF11187 DUF2974: Protein of u 63.2 12 0.00025 30.6 4.0 34 27-60 85-123 (224)
78 KOG4627|consensus 58.3 16 0.00034 31.1 4.0 34 7-40 117-151 (270)
79 KOG4178|consensus 57.8 27 0.00059 30.6 5.6 33 6-40 95-128 (322)
80 PF08479 POTRA_2: POTRA domain 56.6 22 0.00047 23.6 3.9 29 3-31 32-60 (76)
81 PRK05855 short chain dehydroge 55.9 18 0.00039 31.5 4.2 34 6-40 75-109 (582)
82 PLN02324 triacylglycerol lipas 53.2 27 0.00058 31.6 4.9 37 6-42 194-232 (415)
83 COG2947 Uncharacterized conser 52.5 12 0.00026 29.6 2.3 51 10-66 34-87 (156)
84 PLN02733 phosphatidylcholine-s 51.7 27 0.00058 31.5 4.7 16 25-40 161-177 (440)
85 COG4782 Uncharacterized protei 51.3 24 0.00051 31.7 4.2 38 2-40 168-206 (377)
86 PLN02802 triacylglycerol lipas 50.8 46 0.001 31.0 6.1 81 6-86 309-394 (509)
87 PLN02310 triacylglycerol lipas 50.3 24 0.00052 31.8 4.1 61 26-86 209-272 (405)
88 PLN02753 triacylglycerol lipas 49.8 37 0.00079 31.8 5.3 82 6-87 288-383 (531)
89 PLN02571 triacylglycerol lipas 49.4 32 0.0007 31.1 4.8 82 6-87 205-300 (413)
90 PLN02847 triacylglycerol lipas 49.2 33 0.00071 32.8 5.0 40 2-42 228-268 (633)
91 PLN02761 lipase class 3 family 47.1 34 0.00075 31.9 4.7 81 6-86 269-365 (527)
92 PLN03037 lipase class 3 family 45.8 50 0.0011 30.8 5.6 61 26-86 318-382 (525)
93 COG2267 PldB Lysophospholipase 45.6 69 0.0015 26.9 6.0 35 6-40 85-122 (298)
94 PF02450 LCAT: Lecithin:choles 45.4 32 0.0007 30.0 4.1 34 25-58 118-158 (389)
95 smart00824 PKS_TE Thioesterase 44.9 1E+02 0.0022 22.3 6.2 56 7-63 46-105 (212)
96 PF09861 DUF2088: Domain of un 44.7 26 0.00057 28.3 3.2 33 8-40 71-103 (204)
97 PLN02872 triacylglycerol lipas 44.5 16 0.00035 32.1 2.2 38 25-62 159-199 (395)
98 PF08840 BAAT_C: BAAT / Acyl-C 44.1 51 0.0011 26.1 4.8 55 10-65 5-61 (213)
99 PRK10985 putative hydrolase; P 43.4 77 0.0017 26.3 5.9 44 14-58 120-166 (324)
100 PF03403 PAF-AH_p_II: Platelet 42.8 17 0.00036 31.9 1.9 38 23-61 225-263 (379)
101 PLN02511 hydrolase 41.7 67 0.0015 27.7 5.5 25 15-40 163-188 (388)
102 PRK10252 entF enterobactin syn 40.2 71 0.0015 31.2 5.9 56 5-61 1113-1172(1296)
103 PF06057 VirJ: Bacterial virul 39.5 43 0.00094 27.3 3.7 49 11-60 54-107 (192)
104 PLN02652 hydrolase; alpha/beta 39.3 1.1E+02 0.0024 26.7 6.6 53 7-59 187-244 (395)
105 COG0657 Aes Esterase/lipase [L 38.6 70 0.0015 26.2 4.9 25 21-45 147-173 (312)
106 KOG3101|consensus 38.4 13 0.00029 31.6 0.6 47 12-58 125-174 (283)
107 cd06449 ACCD Aminocyclopropane 38.1 1E+02 0.0022 25.6 5.9 51 10-61 160-212 (307)
108 KOG1515|consensus 37.1 81 0.0017 27.5 5.3 46 18-64 158-208 (336)
109 PTZ00397 macrophage migration 36.9 75 0.0016 22.7 4.3 32 5-36 72-105 (116)
110 PLN02719 triacylglycerol lipas 36.0 44 0.00096 31.2 3.6 81 6-86 274-368 (518)
111 COG3076 Uncharacterized protei 35.6 37 0.00081 25.9 2.6 38 1-38 1-39 (135)
112 PLN00413 triacylglycerol lipas 35.5 60 0.0013 30.0 4.4 29 12-42 272-301 (479)
113 PF01674 Lipase_2: Lipase (cla 34.3 74 0.0016 26.0 4.4 24 14-40 66-90 (219)
114 COG0031 CysK Cysteine synthase 34.2 78 0.0017 27.4 4.7 31 34-64 179-211 (300)
115 KOG4409|consensus 34.1 12 0.00027 33.3 -0.2 58 28-86 93-153 (365)
116 PRK11191 RNase E inhibitor pro 33.9 77 0.0017 24.4 4.2 28 7-34 10-38 (138)
117 PRK06352 threonine synthase; V 33.7 1.2E+02 0.0025 26.1 5.7 48 14-61 166-219 (351)
118 PLN02162 triacylglycerol lipas 33.4 66 0.0014 29.7 4.3 20 23-42 275-295 (475)
119 cd00312 Esterase_lipase Estera 33.2 85 0.0018 27.4 4.8 34 7-40 154-191 (493)
120 PF00756 Esterase: Putative es 32.3 56 0.0012 25.4 3.3 52 8-59 96-149 (251)
121 KOG3724|consensus 32.3 72 0.0016 31.7 4.5 53 4-56 156-216 (973)
122 PF01187 MIF: Macrophage migra 32.2 90 0.0019 22.4 4.1 34 5-38 70-105 (114)
123 PF05728 UPF0227: Uncharacteri 31.7 1.5E+02 0.0034 23.3 5.7 34 24-61 57-92 (187)
124 PF01738 DLH: Dienelactone hyd 31.4 64 0.0014 24.8 3.4 30 12-41 83-114 (218)
125 PF10503 Esterase_phd: Esteras 30.7 70 0.0015 26.1 3.7 21 20-40 91-112 (220)
126 TIGR01607 PST-A Plasmodium sub 30.7 73 0.0016 26.8 3.9 14 27-40 143-157 (332)
127 KOG2369|consensus 30.4 77 0.0017 29.3 4.2 32 6-39 164-196 (473)
128 PRK03922 hypothetical protein; 29.8 31 0.00066 26.0 1.3 15 69-83 32-46 (113)
129 COG3208 GrsT Predicted thioest 29.8 77 0.0017 26.8 3.8 106 6-115 55-171 (244)
130 PF00691 OmpA: OmpA family; I 29.0 89 0.0019 20.9 3.5 23 9-31 54-76 (97)
131 KOG2112|consensus 28.8 1.7E+02 0.0036 24.2 5.5 38 5-42 69-110 (206)
132 PRK13604 luxD acyl transferase 28.4 1.1E+02 0.0024 26.5 4.6 29 11-41 95-124 (307)
133 COG1770 PtrB Protease II [Amin 28.3 71 0.0015 30.8 3.7 85 2-87 497-599 (682)
134 PF08602 Mgr1: Mgr1-like, i-AA 27.8 74 0.0016 28.5 3.5 33 2-35 152-187 (363)
135 PF07984 DUF1693: Domain of un 27.2 57 0.0012 28.7 2.7 53 6-58 31-83 (320)
136 PRK02220 4-oxalocrotonate taut 26.9 1.3E+02 0.0028 18.6 3.8 29 3-31 13-42 (61)
137 PRK06608 threonine dehydratase 26.8 1.8E+02 0.004 24.9 5.7 48 13-61 160-209 (338)
138 COG2255 RuvB Holliday junction 25.6 1.6E+02 0.0034 26.1 5.1 77 5-87 32-116 (332)
139 TIGR01274 ACC_deam 1-aminocycl 25.6 2.1E+02 0.0045 24.3 5.8 49 12-61 176-226 (337)
140 PRK07868 acyl-CoA synthetase; 25.3 1.3E+02 0.0027 29.5 4.9 50 6-55 120-172 (994)
141 KOG2382|consensus 25.1 1.3E+02 0.0029 26.3 4.5 51 8-58 103-157 (315)
142 PRK10717 cysteine synthase A; 25.0 1.9E+02 0.0042 24.3 5.5 48 12-61 164-214 (330)
143 cd00474 SUI1_eIF1 The SUI1/eIF 24.8 66 0.0014 22.2 2.2 21 9-29 55-75 (77)
144 TIGR03502 lipase_Pla1_cef extr 24.7 99 0.0021 30.3 4.0 18 23-40 552-570 (792)
145 cd06446 Trp-synth_B Tryptophan 24.4 1.8E+02 0.0039 25.0 5.3 38 23-60 201-238 (365)
146 PRK03910 D-cysteine desulfhydr 24.3 2.3E+02 0.0051 23.8 5.9 49 11-61 170-221 (331)
147 PRK12390 1-aminocyclopropane-1 24.0 2.1E+02 0.0045 24.2 5.5 50 11-60 176-226 (337)
148 PLN02934 triacylglycerol lipas 23.9 1.4E+02 0.0031 27.9 4.7 20 23-42 318-338 (515)
149 PRK04940 hypothetical protein; 23.9 2.1E+02 0.0046 22.9 5.2 31 26-60 60-92 (180)
150 PRK12391 tryptophan synthase s 23.8 1.9E+02 0.0041 25.9 5.4 48 13-60 242-294 (427)
151 PRK10439 enterobactin/ferric e 22.6 2.9E+02 0.0063 24.4 6.3 53 8-60 267-323 (411)
152 PRK14717 putative glycine/sarc 22.4 94 0.002 23.2 2.7 30 22-58 15-45 (107)
153 PF09752 DUF2048: Uncharacteri 22.3 2.7E+02 0.0059 24.7 6.0 53 11-65 162-217 (348)
154 PF06877 RraB: Regulator of ri 22.2 1.3E+02 0.0029 20.8 3.4 25 10-34 5-30 (104)
155 TIGR01138 cysM cysteine syntha 21.5 2.2E+02 0.0047 23.7 5.1 49 12-61 151-201 (290)
156 PF08538 DUF1749: Protein of u 21.3 1.3E+02 0.0028 26.2 3.7 32 9-40 88-123 (303)
157 PF06028 DUF915: Alpha/beta hy 21.0 1.7E+02 0.0037 24.3 4.4 29 10-39 88-117 (255)
158 PTZ00450 macrophage migration 20.7 1.6E+02 0.0034 21.6 3.6 27 7-33 74-101 (113)
159 PF09373 PMBR: Pseudomurein-bi 20.6 1.9E+02 0.004 16.6 3.3 26 4-29 7-32 (33)
160 PRK02289 4-oxalocrotonate taut 20.1 2.3E+02 0.005 17.8 4.0 30 3-32 13-43 (60)
161 PLN02618 tryptophan synthase, 20.1 2.7E+02 0.0058 25.0 5.6 43 19-61 234-276 (410)
No 1
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=5.1e-45 Score=310.45 Aligned_cols=135 Identities=39% Similarity=0.623 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHH-HcCCCCccEEEE-eehhhHHHHH-hhhhcC-CcCCceeeecCCccCCccCCCCccccCCCCCeEE
Q psy18038 6 SLVEQASSIFRLYV-QSGRGFSRVVLI-YSACSSFLIL-SNTFYS-NLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFVD 81 (146)
Q Consensus 6 ~~~~~~~~~~~~l~-~~G~~~~~v~li-~SlGahia~~-~~~~~~-~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fVd 81 (146)
.+.+++.+|+++|. +.|++++++||| ||||||||++ |+++.+ ++|+||||||||+|+|+..++..|||++||+|||
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVd 208 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVD 208 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEE
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEE
Confidence 34556666777777 679999999999 9999999885 566655 5779999999999999998888999999999999
Q ss_pred EEecCCcccccccCCCCCCCCceeEEcCCCCCCCCCCCccchhhhhhhHhhhcccccccccee
Q psy18038 82 VIHSNGENLILGGLGSWQPLGHVDFYPNGGRMQKGCTNLFVGAVSDILWFQFSDHLRNLGWKV 144 (146)
Q Consensus 82 vIHT~~~~l~~g~lG~~~~~Gh~DFypNGG~~QPGC~~~~~~~~~~~~~~~~c~H~rs~~~~~ 144 (146)
|||||+..+..+.+|+.+|+||+|||||||..||||...... +.-...|||.||+.|++
T Consensus 209 vIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~~QPGC~~~~~~----~~~~~~CsH~ra~~~f~ 267 (331)
T PF00151_consen 209 VIHTNAGTLPGGGLGTSEPIGHVDFYPNGGRRQPGCGNDSLE----LTRFISCSHMRAVEYFA 267 (331)
T ss_dssp EE-SSES-HHH-SSBESS--SSEEEEETTTTS-TTSSS-CHT----TCSHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCccccccccccceeecCCCccCCCCcccccc----ceecchhhhHHHHHHHH
Confidence 999999766667899999999999999999999999876531 11245899999999875
No 2
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=6.4e-40 Score=289.18 Aligned_cols=136 Identities=29% Similarity=0.470 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCccCCccCCCCccccCCCCCeEEEEecC
Q psy18038 9 EQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFVDVIHSN 86 (146)
Q Consensus 9 ~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fVdvIHT~ 86 (146)
+.+..|++.|.+ .|++++++||| ||||||+|+.+.+....+++|||+||||+|+|+..++..|||++||+||||||||
T Consensus 101 ~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~~~~~~~rLd~~DA~fVdVIHTd 180 (442)
T TIGR03230 101 KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFEYADAPSTLSPDDADFVDVLHTN 180 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCcccccccccccCCCCCCeEEEEEec
Confidence 344455565554 58999999999 9999999886544433445999999999999999888899999999999999999
Q ss_pred CcccccccCCCCCCCCceeEEcCCCCCCCCCCCccch------hhhhhhHhhhcccccccccee
Q psy18038 87 GENLILGGLGSWQPLGHVDFYPNGGRMQKGCTNLFVG------AVSDILWFQFSDHLRNLGWKV 144 (146)
Q Consensus 87 ~~~l~~g~lG~~~~~Gh~DFypNGG~~QPGC~~~~~~------~~~~~~~~~~c~H~rs~~~~~ 144 (146)
+..+..+.+|+..|+||+|||||||..||||.....- .+..+.....|||.||+.|++
T Consensus 181 ~~~~~~~~lG~~~piGh~DFYPNGG~~QPGC~~~~~~~~~~~~~~~~~~~~~~CsH~Ra~~~f~ 244 (442)
T TIGR03230 181 TRGSPDRSIGIQRPVGHIDIYPNGGTFQPGCDIQETLLVIAEKGLGNMDQLVKCSHERSIHLFI 244 (442)
T ss_pred CCccccccccccccccceEeccCCCCCCCCCCccccccccccccccccCcCccchhHHHHHHHH
Confidence 8544335799999999999999999999999753210 011111235899999999975
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=9.6e-39 Score=263.66 Aligned_cols=126 Identities=41% Similarity=0.667 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecCCccCCccCCCCccccCCCCCeEEEEe
Q psy18038 8 VEQASSIFRLYVQS-GRGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFVDVIH 84 (146)
Q Consensus 8 ~~~~~~~~~~l~~~-G~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fVdvIH 84 (146)
.+.+..++++|.+. |++++++||| ||+|||+|+. ++++.++ ++||++||||+|+|+..++..||+++||+||||||
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~-v~~iv~LDPa~p~f~~~~~~~rl~~~dA~~V~vih 171 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGK-LGRITGLDPAGPLFSGADPEDRLDPSDAQFVDVIH 171 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCc-cceeEEecCCcccccCCCcccccCCCCCCeEEEEE
Confidence 34556667777665 7899999999 9999999875 5666554 59999999999999998888999999999999999
Q ss_pred cCCcccccccCCCCCCCCceeEEcCCCCCCCCCCCccchhhhhhhHhhhcccccccccee
Q psy18038 85 SNGENLILGGLGSWQPLGHVDFYPNGGRMQKGCTNLFVGAVSDILWFQFSDHLRNLGWKV 144 (146)
Q Consensus 85 T~~~~l~~g~lG~~~~~Gh~DFypNGG~~QPGC~~~~~~~~~~~~~~~~c~H~rs~~~~~ 144 (146)
||+ +.+|+..|+||+|||||||..||||...... .....|||.||+.|+.
T Consensus 172 T~~-----~~~G~~~~~gh~dfypngg~~QpgC~~~~~~-----~~~~~CsH~ra~~~~~ 221 (275)
T cd00707 172 TDG-----GLLGFSQPIGHADFYPNGGRDQPGCPKDILS-----SDFVACSHQRAVHYFA 221 (275)
T ss_pred eCC-----CCCCccccccceEeccCCCCCCCCCCCcccc-----ccccccchHHHHHHHH
Confidence 998 5689999999999999999999999865321 2235899999998874
No 4
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.03 E-value=1.6e-09 Score=81.10 Aligned_cols=116 Identities=23% Similarity=0.251 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHH-hhhhcC---CcCCceeeecCCccCCccCCCCccccCCCC
Q psy18038 3 SAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLIL-SNTFYS---NLRTMFPGLDPAGPLFESQDPRSRLDSSDA 77 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~-~~~~~~---~~lgrItgLDPA~P~F~~~~~~~rL~~~DA 77 (146)
+++.+.+.....++.+.+. .+..+++++ ||+||++|.+ +..+.. ..+.++++++|+.+....... .++...++
T Consensus 6 ~~~~~~~~i~~~~~~~~~~-~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~-~~~~~~~~ 83 (153)
T cd00741 6 AARSLANLVLPLLKSALAQ-YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE-DRLDPSDA 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHH-CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH-HhhhccCC
Confidence 4455555555544444432 578899999 9999999875 444433 244899999999998664321 35778889
Q ss_pred CeEEEEecCCcccccccC-CCCCCCCceeEEcCCCCCCCCCCCc
Q psy18038 78 QFVDVIHSNGENLILGGL-GSWQPLGHVDFYPNGGRMQKGCTNL 120 (146)
Q Consensus 78 ~fVdvIHT~~~~l~~g~l-G~~~~~Gh~DFypNGG~~QPGC~~~ 120 (146)
.+|..||++...+..... ......+..+||+|++..++-|...
T Consensus 84 ~~~~~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (153)
T cd00741 84 LFVDRIVNDNDIVPRLPPGGEGYPHGGAEFYINGGKSQPGCCKN 127 (153)
T ss_pred ccEEEEEECCCccCCCCCCcCCCeecceEEEECCCCCCCccccc
Confidence 999999988754322111 2235678899999999877776543
No 5
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=96.02 E-value=0.015 Score=42.41 Aligned_cols=54 Identities=20% Similarity=0.236 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
.++.+.++.+.+++.+.+. ++++|+ ||+||.++. ++.+... .+..++.++|..+
T Consensus 47 ~~~~~~~~~l~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 47 YSIEDYAEDLAELLDALGI--KKVILVGHSMGGMIALRLAARYPD-RVKGLVLLSPPPP 102 (228)
T ss_dssp GSHHHHHHHHHHHHHHTTT--SSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESESSS
T ss_pred cchhhhhhhhhhccccccc--cccccccccccccccccccccccc-ccccceeeccccc
Confidence 4678889999999988777 789999 999999976 4444433 4478889998884
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=95.84 E-value=0.021 Score=45.99 Aligned_cols=55 Identities=5% Similarity=-0.158 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCccC
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGPL 62 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P~ 62 (146)
-++.++++.+..++.+.+. ++++|+ ||+||.++. ++.+... ++.+++.++|+.+.
T Consensus 83 ~~~~~~a~~l~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lili~~~~~~ 139 (294)
T PLN02824 83 YTFETWGEQLNDFCSDVVG--DPAFVICNSVGGVVGLQAAVDAPE-LVRGVMLINISLRG 139 (294)
T ss_pred CCHHHHHHHHHHHHHHhcC--CCeEEEEeCHHHHHHHHHHHhChh-heeEEEEECCCccc
Confidence 3578899999999998875 889999 999999975 4554443 45889999987543
No 7
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=94.94 E-value=0.093 Score=40.40 Aligned_cols=53 Identities=6% Similarity=-0.075 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
.++.++++.+.+++.+.+ .+++++| ||+||.++. ++.+.....+.+|+-++|.
T Consensus 47 ~~~~~~~~~l~~~l~~~~--~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 47 DGFADVSRLLSQTLQSYN--ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred cCHHHHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 377888999999998865 5899999 999999976 4555544434777755554
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=94.92 E-value=0.063 Score=43.58 Aligned_cols=54 Identities=9% Similarity=0.006 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCccC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGPL 62 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P~ 62 (146)
++.++++.+.+++.+.++ ++++|| ||+||.++. ++.+.. +.+.+++-++|+.|.
T Consensus 97 ~~~~~a~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAEHP-DRFARLVVANTGLPT 152 (302)
T ss_pred CHHHHHHHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHhCh-hheeEEEEeCCCCCC
Confidence 567888888888887654 579999 999999976 444443 344888888886543
No 9
>PRK10673 acyl-CoA esterase; Provisional
Probab=94.40 E-value=0.12 Score=39.98 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
.++.++++++..++.+.+ .++++|+ ||+||.++. ++.+.. ..+.+++.+|++-
T Consensus 62 ~~~~~~~~d~~~~l~~l~--~~~~~lvGhS~Gg~va~~~a~~~~-~~v~~lvli~~~~ 116 (255)
T PRK10673 62 MNYPAMAQDLLDTLDALQ--IEKATFIGHSMGGKAVMALTALAP-DRIDKLVAIDIAP 116 (255)
T ss_pred CCHHHHHHHHHHHHHHcC--CCceEEEEECHHHHHHHHHHHhCH-hhcceEEEEecCC
Confidence 467888899999888764 4679999 999999976 344433 3348888888653
No 10
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.33 E-value=0.12 Score=39.77 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-Hhhhh--cCCcCCceeeecCCccCC
Q psy18038 3 SAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTF--YSNLRTMFPGLDPAGPLF 63 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~--~~~~lgrItgLDPA~P~F 63 (146)
...++.+.|+.+.+.+.+..-. ..++|+ ||+||-+|. +++++ .|..+.++.-+|..-|.+
T Consensus 44 ~~~si~~la~~y~~~I~~~~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 44 PPDSIEELASRYAEAIRARQPE-GPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp EESSHHHHHHHHHHHHHHHTSS-SSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred CCCCHHHHHHHHHHHhhhhCCC-CCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 3457888899988888775433 288999 999999987 77776 355558999999777765
No 11
>PLN02965 Probable pheophorbidase
Probab=94.22 E-value=0.11 Score=41.23 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+.+++.+.+.. ++++|| ||+||-++. ++.+...++ .+++-++++.
T Consensus 53 ~~~~~a~dl~~~l~~l~~~-~~~~lvGhSmGG~ia~~~a~~~p~~v-~~lvl~~~~~ 107 (255)
T PLN02965 53 SSDQYNRPLFALLSDLPPD-HKVILVGHSIGGGSVTEALCKFTDKI-SMAIYVAAAM 107 (255)
T ss_pred CHHHHHHHHHHHHHhcCCC-CCEEEEecCcchHHHHHHHHhCchhe-eEEEEEcccc
Confidence 5788899999999886643 689999 999998854 555554444 6777778764
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=93.25 E-value=0.2 Score=40.35 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDP 58 (146)
++.++++.+..++.+.|+ ++++|| ||+||.++. ++.+.. ..+.+++-++|
T Consensus 75 ~~~~~a~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lil~~~ 126 (295)
T PRK03592 75 TFADHARYLDAWFDALGL--DDVVLVGHDWGSALGFDWAARHP-DRVRGIAFMEA 126 (295)
T ss_pred CHHHHHHHHHHHHHHhCC--CCeEEEEECHHHHHHHHHHHhCh-hheeEEEEECC
Confidence 567888888888888765 789999 999999976 444443 44588898997
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=93.21 E-value=0.18 Score=38.12 Aligned_cols=52 Identities=10% Similarity=0.100 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+.+++.+.+ .++++|+ ||+||.++. ++.+. ...+.+++.++|..
T Consensus 62 ~~~~~~~~~~~~i~~~~--~~~~~l~G~S~Gg~~a~~~a~~~-~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 62 SIAHMADDVLQLLDALN--IERFHFVGHALGGLIGLQLALRY-PERLLSLVLINAWS 115 (257)
T ss_pred CHHHHHHHHHHHHHHhC--CCcEEEEEechhHHHHHHHHHHC-hHHhHHheeecCCC
Confidence 46777888888887765 4679999 999999976 34333 23347777777644
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=93.09 E-value=0.22 Score=42.30 Aligned_cols=54 Identities=20% Similarity=0.103 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
++.++++.+..++.+.+. ++++|| ||+||.++. ++.+.....+.+++-++|+.+
T Consensus 137 ~~~~~a~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 137 TMETWAELILDFLEEVVQ--KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred cHHHHHHHHHHHHHHhcC--CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 567788888888887655 689999 999998865 343333334478888888753
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=92.75 E-value=0.29 Score=37.90 Aligned_cols=52 Identities=23% Similarity=0.148 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+.+++.+.++ ++++|+ ||+||-++. ++.++..++ .+++.++|+.
T Consensus 77 ~~~~~~~~l~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v-~~~v~~~~~~ 130 (278)
T TIGR03056 77 TLPSMAEDLSALCAAEGL--SPDGVIGHSAGAAIALRLALDGPVTP-RMVVGINAAL 130 (278)
T ss_pred CHHHHHHHHHHHHHHcCC--CCceEEEECccHHHHHHHHHhCCccc-ceEEEEcCcc
Confidence 577888888888877654 678999 999998865 454444333 6788887754
No 16
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.02 E-value=1.5 Score=34.32 Aligned_cols=78 Identities=17% Similarity=0.127 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCccCCccCCCCccccCCCCCeEEEEecC
Q psy18038 8 VEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFVDVIHSN 86 (146)
Q Consensus 8 ~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fVdvIHT~ 86 (146)
.+.+..|++.+.+.|++.++|+|. ||-||-++...-.-..+.++.+.+|=..-|..... ..+.......-|=++|-.
T Consensus 87 ~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 87 AERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--EDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--HCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--cccccccCCCcEEEEecC
Confidence 344455666666789999999999 99999886633222333558888987766654322 222222224457788855
Q ss_pred C
Q psy18038 87 G 87 (146)
Q Consensus 87 ~ 87 (146)
.
T Consensus 165 ~ 165 (216)
T PF02230_consen 165 E 165 (216)
T ss_dssp T
T ss_pred C
Confidence 4
No 17
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=91.73 E-value=0.34 Score=40.55 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+.+++...|++ +.++|| ||+||.++. ++.++-.++ .+++-++|+.
T Consensus 119 ~~~~~a~dl~~ll~~l~l~-~~~~lvG~SmGG~vA~~~A~~~P~~V-~~LvLi~s~~ 173 (343)
T PRK08775 119 DTADQADAIALLLDALGIA-RLHAFVGYSYGALVGLQFASRHPARV-RTLVVVSGAH 173 (343)
T ss_pred CHHHHHHHHHHHHHHcCCC-cceEEEEECHHHHHHHHHHHHChHhh-heEEEECccc
Confidence 4568899999999887654 225688 999999976 455554443 7788888764
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=91.63 E-value=0.24 Score=36.78 Aligned_cols=52 Identities=17% Similarity=0.122 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.+.++.+.+.+...+ .++++++ ||+||.++. ++.+.. ..+.++..++|+.
T Consensus 61 ~~~~~~~~~~~~i~~~~--~~~v~liG~S~Gg~~a~~~a~~~p-~~v~~li~~~~~~ 114 (251)
T TIGR02427 61 SIEDLADDVLALLDHLG--IERAVFCGLSLGGLIAQGLAARRP-DRVRALVLSNTAA 114 (251)
T ss_pred CHHHHHHHHHHHHHHhC--CCceEEEEeCchHHHHHHHHHHCH-HHhHHHhhccCcc
Confidence 35566666666666544 4689999 999999965 444332 2336667777654
No 19
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=91.54 E-value=0.37 Score=38.49 Aligned_cols=52 Identities=12% Similarity=0.007 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++..+++.+.+++...+ .++++|| ||+||.++. ++.+.. ..+.+++-++|+.
T Consensus 73 ~~~~~~~~~~~~i~~l~--~~~~~LvG~S~GG~va~~~a~~~p-~~v~~lvl~~~~~ 126 (276)
T TIGR02240 73 RFPGLAKLAARMLDYLD--YGQVNAIGVSWGGALAQQFAHDYP-ERCKKLILAATAA 126 (276)
T ss_pred cHHHHHHHHHHHHHHhC--cCceEEEEECHHHHHHHHHHHHCH-HHhhheEEeccCC
Confidence 35566777777776654 5689999 999999965 454433 3458888888875
No 20
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=91.54 E-value=0.63 Score=34.29 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
.++.+.++.++..+.+. ++.++++|+ ||+||.++. ++.+.. +.+..++-++|.
T Consensus 50 ~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~ia~~~a~~~~-~~v~~lil~~~~ 104 (251)
T TIGR03695 50 YDFEEAAQDILATLLDQ-LGIEPFFLVGYSMGGRIALYYALQYP-ERVQGLILESGS 104 (251)
T ss_pred hhHHHHHHHHHHHHHHH-cCCCeEEEEEeccHHHHHHHHHHhCc-hheeeeEEecCC
Confidence 35566666644433331 356789999 999999976 444443 334677766664
No 21
>PLN02578 hydrolase
Probab=91.46 E-value=0.43 Score=40.21 Aligned_cols=53 Identities=11% Similarity=-0.017 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
+....++.+..++.+.+ .+++++| ||+||.++. ++.++..+ +.+++-++|+++
T Consensus 134 ~~~~~a~~l~~~i~~~~--~~~~~lvG~S~Gg~ia~~~A~~~p~~-v~~lvLv~~~~~ 188 (354)
T PLN02578 134 DAMVWRDQVADFVKEVV--KEPAVLVGNSLGGFTALSTAVGYPEL-VAGVALLNSAGQ 188 (354)
T ss_pred CHHHHHHHHHHHHHHhc--cCCeEEEEECHHHHHHHHHHHhChHh-cceEEEECCCcc
Confidence 34556667777777655 3789999 999999965 45555444 488888898865
No 22
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=91.18 E-value=0.83 Score=34.82 Aligned_cols=52 Identities=6% Similarity=-0.088 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.+.++.+..++.+.+ .++++|| ||+||.++. ++.++. ..+.+++.++|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~--~~~~~liG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 131 (288)
T TIGR01250 78 TIDYFVDELEEVREKLG--LDKFYLLGHSWGGMLAQEYALKYG-QHLKGLIISSMLD 131 (288)
T ss_pred cHHHHHHHHHHHHHHcC--CCcEEEEEeehHHHHHHHHHHhCc-cccceeeEecccc
Confidence 45667777777666655 4569999 999999976 444443 3347777766654
No 23
>PRK10349 carboxylesterase BioH; Provisional
Probab=91.06 E-value=0.42 Score=37.46 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
++.++++.+. +.+ .++++|| ||+||.++. ++.+... .+.+++-++|+
T Consensus 60 ~~~~~~~~l~----~~~--~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lili~~~ 108 (256)
T PRK10349 60 SLADMAEAVL----QQA--PDKAIWLGWSLGGLVASQIALTHPE-RVQALVTVASS 108 (256)
T ss_pred CHHHHHHHHH----hcC--CCCeEEEEECHHHHHHHHHHHhChH-hhheEEEecCc
Confidence 3444555444 333 4899999 999999976 4544443 34888888985
No 24
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=90.43 E-value=0.51 Score=39.06 Aligned_cols=70 Identities=14% Similarity=-0.010 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHHcCC----CCccEEEE-eehhhHHHH-Hhhhhc--CCcCCceeeecCCccCCccCCCCccccC
Q psy18038 5 KSLVEQASSIFRLYVQSGR----GFSRVVLI-YSACSSFLI-LSNTFY--SNLRTMFPGLDPAGPLFESQDPRSRLDS 74 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~----~~~~v~li-~SlGahia~-~~~~~~--~~~lgrItgLDPA~P~F~~~~~~~rL~~ 74 (146)
-+|.+|.+--++++.+.-. +-.+++|| ||.||.++. +-+++. ...+-+..+|=|.--.....+...+|.+
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~ 136 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTP 136 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHH
Confidence 3678888777777766432 77889999 999999976 666665 2333677788776554444444444543
No 25
>PRK11460 putative hydrolase; Provisional
Probab=90.43 E-value=0.96 Score=36.22 Aligned_cols=40 Identities=23% Similarity=0.194 Sum_probs=27.3
Q ss_pred HHHcCCCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecC
Q psy18038 18 YVQSGRGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 18 l~~~G~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDP 58 (146)
..+.+++.++|+|+ ||.||.++.. +.+ ..++++.+.++-+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~-~~~~~~~vv~~sg 136 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKA-EPGLAGRVIAFSG 136 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHh-CCCcceEEEEecc
Confidence 34468999999999 9999999753 322 2334466666644
No 26
>PRK03204 haloalkane dehalogenase; Provisional
Probab=89.78 E-value=0.72 Score=37.58 Aligned_cols=52 Identities=10% Similarity=-0.114 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+.+++.+.|. ++++++ ||+||.++. ++.+...+ +.+++-++|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~ 136 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGL--DRYLSMGQDWGGPISMAVAVERADR-VRGVVLGNTWF 136 (286)
T ss_pred CHHHHHHHHHHHHHHhCC--CCEEEEEECccHHHHHHHHHhChhh-eeEEEEECccc
Confidence 467778888888877654 789999 999999965 44444333 47777666643
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=89.54 E-value=0.69 Score=38.80 Aligned_cols=53 Identities=8% Similarity=-0.007 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCcc-EEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSR-VVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~-v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
.++.++++.+.+++.+.|+ ++ ++|+ ||+||.++. ++.++.. .+.+++-++++.
T Consensus 107 ~~~~~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 162 (351)
T TIGR01392 107 ITIRDDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPE-RVRAIVVLATSA 162 (351)
T ss_pred CcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChH-hhheEEEEccCC
Confidence 4678899999999988766 56 8999 999999865 4544433 347778788753
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=89.34 E-value=0.49 Score=35.08 Aligned_cols=48 Identities=13% Similarity=0.103 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+...+ .+++++| ||+||.++. ++.+.. +.+.+++.++|+.
T Consensus 51 ~~~~~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p-~~v~~~il~~~~~ 100 (245)
T TIGR01738 51 SLADAAEAIAAQA------PDPAIWLGWSLGGLVALHIAATHP-DRVRALVTVASSP 100 (245)
T ss_pred CHHHHHHHHHHhC------CCCeEEEEEcHHHHHHHHHHHHCH-HhhheeeEecCCc
Confidence 4555555554432 2689999 999999965 444433 3347777777753
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=89.26 E-value=0.93 Score=37.30 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+..++.+.+ .++++|+ ||+||.++. ++.+. ...+.+++.++|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~--~~~~~lvG~S~Gg~~a~~~a~~~-~~~v~~lv~~~~~~ 232 (371)
T PRK14875 179 SLDELAAAVLAFLDALG--IERAHLVGHSMGGAVALRLAARA-PQRVASLTLIAPAG 232 (371)
T ss_pred CHHHHHHHHHHHHHhcC--CccEEEEeechHHHHHHHHHHhC-chheeEEEEECcCC
Confidence 46677777777776654 4689999 999999976 44443 33348888888864
No 30
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=89.24 E-value=1.2 Score=36.01 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=36.2
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHh---hhhcCCcCCceeeec
Q psy18038 3 SAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILS---NTFYSNLRTMFPGLD 57 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~---~~~~~~~lgrItgLD 57 (146)
.++.+.+....|.+.+.....+.++|.|| ||+||=++-.+ .......+..|+-|.
T Consensus 62 q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 62 QAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 35666677777777776667899999999 99998775432 112223345666553
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.75 E-value=1.1 Score=36.55 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
.++.+.++.+..++.+.+. .++++|| ||+||.++. ++.++. +.+.+++-+++.-
T Consensus 67 ~~~~~~~~~l~~~i~~l~~-~~~v~lvGhS~GG~v~~~~a~~~p-~~v~~lv~~~~~~ 122 (273)
T PLN02211 67 TTFDEYNKPLIDFLSSLPE-NEKVILVGHSAGGLSVTQAIHRFP-KKICLAVYVAATM 122 (273)
T ss_pred CCHHHHHHHHHHHHHhcCC-CCCEEEEEECchHHHHHHHHHhCh-hheeEEEEecccc
Confidence 4677788888888877643 4789999 999999865 444443 3346666676643
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=88.34 E-value=0.93 Score=35.63 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
.++.+.+++... ..++++++ ||+||.++. ++.++..+ +..++-++|++
T Consensus 87 ~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 136 (282)
T TIGR03343 87 NARAVKGLMDAL--DIEKAHLVGNSMGGATALNFALEYPDR-IGKLILMGPGG 136 (282)
T ss_pred hHHHHHHHHHHc--CCCCeeEEEECchHHHHHHHHHhChHh-hceEEEECCCC
Confidence 456666666554 55799999 999999965 45444333 37788888864
No 33
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=87.99 E-value=1.1 Score=33.27 Aligned_cols=50 Identities=12% Similarity=0.065 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
..+++..+...+...|++. +++| ||+||-++. ++..+.. .+.+|+.+.|+
T Consensus 27 ~~~~~~~~~~~~~~l~~~~--~~~vG~S~Gg~~~~~~a~~~p~-~v~~lvl~~~~ 78 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKK--INLVGHSMGGMLALEYAAQYPE-RVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSS--EEEEEETHHHHHHHHHHHHSGG-GEEEEEEESES
T ss_pred HHHHHHHHHHHHHHhCCCC--eEEEEECCChHHHHHHHHHCch-hhcCcEEEeee
Confidence 4566777777777777665 9999 999998865 4544444 44888877775
No 34
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=87.75 E-value=1.2 Score=39.04 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
++.++++.+.+++.+.++ ++++|+ ||+||-++. ++.+.. +++.+++-++|+.+
T Consensus 179 s~~~~a~~l~~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P-~~v~~lILi~~~~~ 233 (383)
T PLN03084 179 TLDEYVSSLESLIDELKS--DKVSLVVQGYFSPPVVKYASAHP-DKIKKLILLNPPLT 233 (383)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEECHHHHHHHHHHHhCh-HhhcEEEEECCCCc
Confidence 677888999999988776 589999 999987754 444443 34589999999754
No 35
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=87.74 E-value=1.1 Score=34.56 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHh
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~ 42 (146)
+.++.+.+-.+..+..+++++|.++ +|.||+++...
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 4444444444444456999999999 99999997643
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=87.41 E-value=1.3 Score=37.98 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCcc-EEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSR-VVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~-v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
++.++++.+.+++...|+ ++ .+|+ ||+||.++. ++.++..+ +.+++.+|++.+
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 183 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDR-VRSALVIASSAR 183 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHh-hhEEEEECCCcc
Confidence 688999999999988766 56 4888 999998865 45555444 488899987764
No 37
>PLN00021 chlorophyllase
Probab=87.16 E-value=1.1 Score=38.23 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=27.1
Q ss_pred CCCccEEEE-eehhhHHHH-Hhhhhc----CCcCCceeeecCCc
Q psy18038 23 RGFSRVVLI-YSACSSFLI-LSNTFY----SNLRTMFPGLDPAG 60 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~-~~~~~~----~~~lgrItgLDPA~ 60 (146)
.++++++|+ ||+||.++. ++.+.. ...+..++++||..
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 667899999 999999965 342221 12347889999965
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=87.12 E-value=2 Score=35.82 Aligned_cols=54 Identities=7% Similarity=0.042 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHc--CCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQS--GRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~--G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+..++... ..+..+++|+ ||+||.++. ++.+... .+.+++-+.|+.
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~p~~ 166 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG-VFDAIALCAPMF 166 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC-CcceEEEECchh
Confidence 5666777777666543 2456889999 999999965 3433333 346777887763
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=86.88 E-value=2.1 Score=37.29 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
+++.+..++...+ .++++|+ ||+||.++. ++.+...+ +.+++-++|++.
T Consensus 162 ~~~~i~~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~-v~~lvl~~p~~~ 212 (402)
T PLN02894 162 FIDSFEEWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEH-VQHLILVGPAGF 212 (402)
T ss_pred HHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchh-hcEEEEECCccc
Confidence 3445555555544 4689999 999999976 44444333 477888888764
No 40
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=86.74 E-value=2.3 Score=35.51 Aligned_cols=50 Identities=14% Similarity=0.227 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
+-+...+++|.+.+ .++++|+ ||+||.++. ++.+...+ +.+++-++|+-.
T Consensus 84 ~Dv~~ai~~L~~~~--~~~v~LvG~SmGG~vAl~~A~~~p~~-v~~lVL~~P~~~ 135 (266)
T TIGR03101 84 EDVAAAYRWLIEQG--HPPVTLWGLRLGALLALDAANPLAAK-CNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHhcC--CCCEEEEEECHHHHHHHHHHHhCccc-cceEEEeccccc
Confidence 33344566777765 5789999 999999976 45444433 478889998654
No 41
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=86.72 E-value=1.4 Score=36.85 Aligned_cols=54 Identities=11% Similarity=-0.048 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHcC----CCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 6 SLVEQASSIFRLYVQSG----RGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G----~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
++.++++.+..++...+ ++..+++|+ ||+||.++. ++.+.. +.+..++-++|+.
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p-~~v~glVLi~p~~ 197 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP-NAWDGAILVAPMC 197 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc-chhhheeEecccc
Confidence 45666677766665543 345579999 999999975 343333 3346777777764
No 42
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=85.79 E-value=1.5 Score=35.71 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
+....|++.|.+. -..++|||| ||+|+.+..
T Consensus 77 ~~l~~~L~~L~~~-~~~~~I~ilaHSMG~rv~~ 108 (233)
T PF05990_consen 77 PALARFLRDLARA-PGIKRIHILAHSMGNRVLL 108 (233)
T ss_pred HHHHHHHHHHHhc-cCCceEEEEEeCchHHHHH
Confidence 3333344444433 457899999 999999954
No 43
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.70 E-value=3 Score=32.87 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHh-hhhcCC-cCCceeeecCCccCCccCCCCccccCCCCCeE
Q psy18038 4 AKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILS-NTFYSN-LRTMFPGLDPAGPLFESQDPRSRLDSSDAQFV 80 (146)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~-~~~~~~-~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fV 80 (146)
++.+.+.....++.+.+. .+-.++.+. |||||-+|.+. -.+..+ .-.+|.+.==+.|..-+.......+.....+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~-~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~ 185 (229)
T cd00519 107 YKSLYNQVLPELKSALKQ-YPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVY 185 (229)
T ss_pred HHHHHHHHHHHHHHHHhh-CCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEE
Confidence 344444443333333332 466678888 99999987653 222211 01345555445555433211111234456677
Q ss_pred EEEecCC
Q psy18038 81 DVIHSNG 87 (146)
Q Consensus 81 dvIHT~~ 87 (146)
.++|.+-
T Consensus 186 rvv~~~D 192 (229)
T cd00519 186 RVVHGND 192 (229)
T ss_pred EEEECCC
Confidence 7777653
No 44
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=84.92 E-value=3.2 Score=33.77 Aligned_cols=33 Identities=9% Similarity=-0.165 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHH
Q psy18038 9 EQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLIL 41 (146)
Q Consensus 9 ~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~ 41 (146)
.+++.+...+.+ .+++.+++.++ ||+||+++..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~ 154 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALV 154 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHH
Confidence 345566565655 47888999999 9999999663
No 45
>PRK10566 esterase; Provisional
Probab=84.63 E-value=1.7 Score=33.91 Aligned_cols=28 Identities=11% Similarity=-0.137 Sum_probs=21.5
Q ss_pred HHHHHHHcC-CCCccEEEE-eehhhHHHHH
Q psy18038 14 IFRLYVQSG-RGFSRVVLI-YSACSSFLIL 41 (146)
Q Consensus 14 ~~~~l~~~G-~~~~~v~li-~SlGahia~~ 41 (146)
++..+.+.+ ++.+++.++ ||+||.++..
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~ 123 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALG 123 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHH
Confidence 345555554 889999999 9999999763
No 46
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=84.04 E-value=1.2 Score=33.91 Aligned_cols=47 Identities=21% Similarity=0.155 Sum_probs=30.4
Q ss_pred HHHHHHHH----cCCCCccEEEE-eehhhHHHH-Hhhhh---cCCcCCceeeecCC
Q psy18038 13 SIFRLYVQ----SGRGFSRVVLI-YSACSSFLI-LSNTF---YSNLRTMFPGLDPA 59 (146)
Q Consensus 13 ~~~~~l~~----~G~~~~~v~li-~SlGahia~-~~~~~---~~~~lgrItgLDPA 59 (146)
..++.+.+ .|++.++|+|+ +|.|||++. ++.+. ....+..+..+-|.
T Consensus 54 ~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 54 AAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred cceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 34444444 48999999999 999999965 44333 12234566666663
No 47
>PHA02857 monoglyceride lipase; Provisional
Probab=82.99 E-value=4.7 Score=31.85 Aligned_cols=36 Identities=25% Similarity=0.103 Sum_probs=24.9
Q ss_pred CCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecCC
Q psy18038 23 RGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDPA 59 (146)
.+.++++|+ ||+||-++.. +.+.. +.+.+++-+.|+
T Consensus 94 ~~~~~~~lvG~S~GG~ia~~~a~~~p-~~i~~lil~~p~ 131 (276)
T PHA02857 94 YPGVPVFLLGHSMGATISILAAYKNP-NLFTAMILMSPL 131 (276)
T ss_pred CCCCCEEEEEcCchHHHHHHHHHhCc-cccceEEEeccc
Confidence 455789999 9999988653 43333 334777888774
No 48
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=82.60 E-value=0.66 Score=28.01 Aligned_cols=16 Identities=44% Similarity=0.706 Sum_probs=11.3
Q ss_pred eEEcCCCCCCCCCCCccc
Q psy18038 105 DFYPNGGRMQKGCTNLFV 122 (146)
Q Consensus 105 DFypNGG~~QPGC~~~~~ 122 (146)
||-=| +.||||.+.--
T Consensus 9 ~FvCn--T~QPGC~nvCy 24 (34)
T smart00037 9 DFVCN--TQQPGCENVCY 24 (34)
T ss_pred hceec--CCCCCccceec
Confidence 56555 78999987543
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=82.09 E-value=2.9 Score=29.33 Aligned_cols=33 Identities=18% Similarity=0.124 Sum_probs=24.7
Q ss_pred CCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecC
Q psy18038 24 GFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 24 ~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDP 58 (146)
+.+++.|+ ||+||.++.. +.+- .+ +..+..+.|
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-~~-v~~~v~~~~ 93 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-PR-VKAVVLLSP 93 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-TT-ESEEEEESE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-cc-eeEEEEecC
Confidence 89999999 9999999653 4333 33 377788888
No 50
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=81.96 E-value=5 Score=32.97 Aligned_cols=53 Identities=8% Similarity=-0.174 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHc----CCCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecCCc
Q psy18038 7 LVEQASSIFRLYVQS----GRGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~----G~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDPA~ 60 (146)
+..+++++..++... ..+..+++|+ ||+||.++.. +.+.. ..+.+++-+.|..
T Consensus 111 ~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~~~~ 169 (330)
T PLN02298 111 VDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP-EGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc-ccceeEEEecccc
Confidence 344555554444432 2344578999 9999999753 33332 3346677776653
No 51
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=81.13 E-value=2.5 Score=37.05 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEE-EE-eehhhHHHH-HhhhhcCCcCCceeee
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVV-LI-YSACSSFLI-LSNTFYSNLRTMFPGL 56 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~-li-~SlGahia~-~~~~~~~~~lgrItgL 56 (146)
++.++++.+.+++.+.|+ ++++ +| ||+||.++. ++-++-.++ .+++-+
T Consensus 142 t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v-~~lv~i 192 (389)
T PRK06765 142 TILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMV-ERMIGV 192 (389)
T ss_pred cHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhh-heEEEE
Confidence 688999999999977665 6776 67 999999875 444433222 454444
No 52
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=80.60 E-value=2.3 Score=30.41 Aligned_cols=62 Identities=11% Similarity=0.044 Sum_probs=31.8
Q ss_pred CccEEEE-eehhhHHHHHh-hhh---cCCcCCceeeecCCccCCccCCCCccccCCCC-CeEEEEecC
Q psy18038 25 FSRVVLI-YSACSSFLILS-NTF---YSNLRTMFPGLDPAGPLFESQDPRSRLDSSDA-QFVDVIHSN 86 (146)
Q Consensus 25 ~~~v~li-~SlGahia~~~-~~~---~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA-~fVdvIHT~ 86 (146)
..++.+. |||||-+|.+. -.+ ....-.++..+=-+.|..-+......++..-. .+..++|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~~~~~~~~iv~~~ 130 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSLFNRNIFRIVNQN 130 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHHTSCGEEEEEETT
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhhCCCeEEEEEECC
Confidence 4788888 99999987643 222 11101456666666676644322223332222 466777754
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=80.45 E-value=4.6 Score=35.49 Aligned_cols=51 Identities=8% Similarity=0.024 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHc-CCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCc
Q psy18038 10 QASSIFRLYVQS-GRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 10 ~~~~~~~~l~~~-G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~ 60 (146)
..+.++.+|.+. .++.+++.++ ||+||.++...-......+..++.++|.-
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 345566777665 4789999999 99999997643333333346677777653
No 54
>PRK06489 hypothetical protein; Provisional
Probab=80.19 E-value=3.6 Score=34.63 Aligned_cols=51 Identities=8% Similarity=0.105 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHH-cCCCCccEE-EE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 6 SLVEQASSIFRLYVQ-SGRGFSRVV-LI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G~~~~~v~-li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
++.++++.+.+++.+ .| .++++ |+ ||+||.+|. ++.++-.+ +.+++-++++
T Consensus 134 ~~~~~a~~~~~~l~~~lg--i~~~~~lvG~SmGG~vAl~~A~~~P~~-V~~LVLi~s~ 188 (360)
T PRK06489 134 DYDDMVEAQYRLVTEGLG--VKHLRLILGTSMGGMHAWMWGEKYPDF-MDALMPMASQ 188 (360)
T ss_pred cHHHHHHHHHHHHHHhcC--CCceeEEEEECHHHHHHHHHHHhCchh-hheeeeeccC
Confidence 566778777776644 44 46776 67 999999976 45444333 3666666654
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=80.07 E-value=6 Score=28.32 Aligned_cols=51 Identities=22% Similarity=0.133 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 8 VEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 8 ~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
...++.+..++.+.|... ++|+ ||+|+.++. .+.+... .+.+++.++|..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~l~G~S~Gg~~~~~~~~~~p~-~~~~~v~~~~~~~ 124 (282)
T COG0596 72 SAYADDLAALLDALGLEK--VVLVGHSMGGAVALALALRHPD-RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHHHHHhCCCc--eEEEEecccHHHHHHHHHhcch-hhheeeEecCCCC
Confidence 334777777787777665 8888 999987755 3444433 3377777777654
No 56
>PRK11071 esterase YqiA; Provisional
Probab=79.67 E-value=6 Score=30.74 Aligned_cols=47 Identities=21% Similarity=0.205 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
+.++.+.+++.+.+. ++++++ +|+||.++. ++.++.. +.+.++|+-.
T Consensus 46 ~~~~~l~~l~~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~----~~vl~~~~~~ 94 (190)
T PRK11071 46 DAAELLESLVLEHGG--DPLGLVGSSLGGYYATWLSQCFML----PAVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHHcCC--CCeEEEEECHHHHHHHHHHHHcCC----CEEEECCCCC
Confidence 345555566655554 589999 999999965 5555441 3466777643
No 57
>PLN02408 phospholipase A1
Probab=79.35 E-value=6.3 Score=34.91 Aligned_cols=82 Identities=18% Similarity=0.278 Sum_probs=46.1
Q ss_pred hHHHHHH-HHHHHHHHHcCCCCccEEEE-eehhhHHHHHhh-hh---cCCcCCceeeecCCccCCccCCCCccccCCCCC
Q psy18038 5 KSLVEQA-SSIFRLYVQSGRGFSRVVLI-YSACSSFLILSN-TF---YSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQ 78 (146)
Q Consensus 5 ~~~~~~~-~~~~~~l~~~G~~~~~v~li-~SlGahia~~~~-~~---~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~ 78 (146)
+|+++++ +.+.+++.+.+-..-+|++. |||||.+|.++- .+ .... +.|+..-=++|..-+......++....+
T Consensus 178 ~s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~-~~V~v~tFGsPRVGN~~Fa~~~~~~~~~ 256 (365)
T PLN02408 178 PSLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRA-PMVTVISFGGPRVGNRSFRRQLEKQGTK 256 (365)
T ss_pred hhHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCC-CceEEEEcCCCCcccHHHHHHHHhcCCc
Confidence 3566665 44445555554444468888 999999976532 11 1111 2455555566655443333455555566
Q ss_pred eEEEEecCC
Q psy18038 79 FVDVIHSNG 87 (146)
Q Consensus 79 fVdvIHT~~ 87 (146)
+.-|+|.+-
T Consensus 257 ~lRVvN~~D 265 (365)
T PLN02408 257 VLRIVNSDD 265 (365)
T ss_pred EEEEEeCCC
Confidence 777777653
No 58
>KOG4409|consensus
Probab=79.34 E-value=2.4 Score=37.69 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=35.6
Q ss_pred HHHHHHHH--cCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCccC
Q psy18038 13 SIFRLYVQ--SGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGPL 62 (146)
Q Consensus 13 ~~~~~l~~--~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P~ 62 (146)
.|++.+.| ....++|+.|+ ||+||.++. .+..+-.++ ...+=.||+|--
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV-~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERV-EKLILVSPWGFP 197 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhh-ceEEEecccccc
Confidence 34444444 45667799999 999999954 676665555 888999999843
No 59
>KOG2564|consensus
Probab=78.87 E-value=2.5 Score=37.02 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHH-h-hhhcCCcCCceeeecCCc
Q psy18038 4 AKSLVEQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLIL-S-NTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 4 ~~~~~~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~-~-~~~~~~~lgrItgLDPA~ 60 (146)
+-|+.-++.+|...+.. .|=.+..|.|| ||+|+.||.. + +..-.++ --|+-+|=..
T Consensus 123 dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl-~Gl~viDVVE 182 (343)
T KOG2564|consen 123 DLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSL-AGLVVIDVVE 182 (343)
T ss_pred hcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhh-hceEEEEEec
Confidence 34455555566655555 46667779999 9999999642 2 2222222 4456666443
No 60
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=78.37 E-value=5 Score=36.46 Aligned_cols=51 Identities=14% Similarity=0.080 Sum_probs=35.5
Q ss_pred HHHHHHHHHH-HHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 6 SLVEQASSIF-RLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 6 ~~~~~~~~~~-~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
++.++++.+. .++...| .++++|+ ||+||-++. ++.++.. .+.+++-++|+
T Consensus 255 tl~~~a~~l~~~ll~~lg--~~k~~LVGhSmGG~iAl~~A~~~Pe-~V~~LVLi~~~ 308 (481)
T PLN03087 255 TLREHLEMIERSVLERYK--VKSFHIVAHSLGCILALALAVKHPG-AVKSLTLLAPP 308 (481)
T ss_pred CHHHHHHHHHHHHHHHcC--CCCEEEEEECHHHHHHHHHHHhChH-hccEEEEECCC
Confidence 4666777774 4555555 5689999 999999976 4554443 44888888874
No 61
>PRK07581 hypothetical protein; Validated
Probab=77.49 E-value=3.9 Score=33.81 Aligned_cols=49 Identities=10% Similarity=0.121 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHH-cCCCCcc-EEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 8 VEQASSIFRLYVQ-SGRGFSR-VVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 8 ~~~~~~~~~~l~~-~G~~~~~-v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
.+.+....+.|.+ .|+ ++ .+|| ||+||.+|. ++.++-.+ +.+++-++.+
T Consensus 106 ~~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~-V~~Lvli~~~ 158 (339)
T PRK07581 106 YDNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDM-VERAAPIAGT 158 (339)
T ss_pred HHHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHH-HhhheeeecC
Confidence 3333333344443 555 78 4788 999999976 55554433 3666666644
No 62
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=77.11 E-value=5.1 Score=32.77 Aligned_cols=51 Identities=14% Similarity=0.014 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
++.++++.+..++...+ .++++++ ||+||.++. ++.+... .+.++.-.+++
T Consensus 77 ~~~~~~~dl~~l~~~l~--~~~~~lvG~S~GG~ia~~~a~~~p~-~v~~lvl~~~~ 129 (306)
T TIGR01249 77 TTWDLVADIEKLREKLG--IKNWLVFGGSWGSTLALAYAQTHPE-VVTGLVLRGIF 129 (306)
T ss_pred CHHHHHHHHHHHHHHcC--CCCEEEEEECHHHHHHHHHHHHChH-hhhhheeeccc
Confidence 45567777777776655 4689999 999998865 4444332 23556666654
No 63
>COG0400 Predicted esterase [General function prediction only]
Probab=76.96 E-value=7.5 Score=31.51 Aligned_cols=53 Identities=25% Similarity=0.190 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCccC
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGPL 62 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P~ 62 (146)
++++.+.....+.|++.+++.++ ||=||.++. ..-+..+ +...+.++-|.-|.
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~-~~~~ail~~g~~~~ 136 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG-LFAGAILFSGMLPL 136 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCch-hhccchhcCCcCCC
Confidence 34444444555579999999999 999999965 3333333 34788888887775
No 64
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=76.12 E-value=7.4 Score=30.17 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=21.4
Q ss_pred HHHHHHHHH-cCCCCccEEEE-eehhhHHHH
Q psy18038 12 SSIFRLYVQ-SGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 12 ~~~~~~l~~-~G~~~~~v~li-~SlGahia~ 40 (146)
..+++.+.+ .+++.++++|+ ||.||.++.
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~ 110 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTA 110 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHH
Confidence 344444444 47899999999 999999864
No 65
>PLN02442 S-formylglutathione hydrolase
Probab=75.28 E-value=6.2 Score=32.49 Aligned_cols=36 Identities=11% Similarity=-0.024 Sum_probs=23.4
Q ss_pred CCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecCC
Q psy18038 23 RGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDPA 59 (146)
++.++++++ +|+||+.+.. +-+. ..+...+..+.|.
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~~-p~~~~~~~~~~~~ 177 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLKN-PDKYKSVSAFAPI 177 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHhC-chhEEEEEEECCc
Confidence 688999999 9999998653 3222 2333455555554
No 66
>KOG1454|consensus
Probab=71.74 E-value=11 Score=32.28 Aligned_cols=48 Identities=19% Similarity=0.016 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeec
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLD 57 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLD 57 (146)
+.+.++.+.++..+.+... ++|+ ||+|+-+|.. +-.+- ..+..++.||
T Consensus 111 ~~~~v~~i~~~~~~~~~~~--~~lvghS~Gg~va~~~Aa~~P-~~V~~lv~~~ 160 (326)
T KOG1454|consen 111 LRELVELIRRFVKEVFVEP--VSLVGHSLGGIVALKAAAYYP-ETVDSLVLLD 160 (326)
T ss_pred hhHHHHHHHHHHHhhcCcc--eEEEEeCcHHHHHHHHHHhCc-ccccceeeec
Confidence 4556666666666666544 9999 9999999774 44444 4448889777
No 67
>PRK10162 acetyl esterase; Provisional
Probab=71.60 E-value=6.9 Score=32.76 Aligned_cols=23 Identities=22% Similarity=0.177 Sum_probs=19.4
Q ss_pred HHHcCCCCccEEEE-eehhhHHHH
Q psy18038 18 YVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 18 l~~~G~~~~~v~li-~SlGahia~ 40 (146)
..+.|++.+++.|. +|+||+++.
T Consensus 146 ~~~~~~d~~~i~l~G~SaGG~la~ 169 (318)
T PRK10162 146 AEDYGINMSRIGFAGDSAGAMLAL 169 (318)
T ss_pred HHHhCCChhHEEEEEECHHHHHHH
Confidence 33468999999999 999999965
No 68
>PLN02454 triacylglycerol lipase
Probab=71.58 E-value=7.9 Score=34.93 Aligned_cols=36 Identities=19% Similarity=0.072 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCc--cEEEE-eehhhHHHHHh
Q psy18038 6 SLVEQASSIFRLYVQSGRGFS--RVVLI-YSACSSFLILS 42 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~--~v~li-~SlGahia~~~ 42 (146)
|+++++...++.|.+.- +-+ +|++. |||||.+|.++
T Consensus 207 S~r~qvl~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLa 245 (414)
T PLN02454 207 SARSQLLAKIKELLERY-KDEKLSIVLTGHSLGASLATLA 245 (414)
T ss_pred HHHHHHHHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHH
Confidence 67777777777776642 223 48888 99999997654
No 69
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=71.46 E-value=7.6 Score=34.58 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHHHHHHHH--cCCCCccEEEE-eehhhHHHHH
Q psy18038 3 SAKSLVEQASSIFRLYVQ--SGRGFSRVVLI-YSACSSFLIL 41 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~--~G~~~~~v~li-~SlGahia~~ 41 (146)
+.+.|++-....+++|++ .|+.+++|.+- ||+||.++..
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 357889999999999996 68999999998 9999999543
No 70
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=70.45 E-value=7.8 Score=40.17 Aligned_cols=51 Identities=16% Similarity=0.164 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA 59 (146)
++.++++.+.+++.+.+ .++++|+ ||+||.++. ++.++..+ +.+++-++++
T Consensus 1427 si~~~a~~l~~ll~~l~--~~~v~LvGhSmGG~iAl~~A~~~P~~-V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEHIT--PGKVTLVGYSMGARIALYMALRFSDK-IEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHhChHh-hCEEEEECCC
Confidence 57788888888887755 4699999 999999976 45544433 3677777764
No 71
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=67.68 E-value=11 Score=31.98 Aligned_cols=56 Identities=18% Similarity=0.099 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHHHc---C--CCCccEEEE-eehhhHHHH-Hhhhh-c---CCcCCceeeecCCc
Q psy18038 5 KSLVEQASSIFRLYVQS---G--RGFSRVVLI-YSACSSFLI-LSNTF-Y---SNLRTMFPGLDPAG 60 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~---G--~~~~~v~li-~SlGahia~-~~~~~-~---~~~lgrItgLDPA~ 60 (146)
+++.++++-+.+-|... + .+++|+.|. ||-|+.++. ++-.. . ...+.-+.+|||..
T Consensus 65 ~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 65 ASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 34445544444433332 2 588899999 999999864 22222 1 22347889999998
No 72
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=67.04 E-value=6.8 Score=31.22 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
+++.+.+.+.+......++.+| ||+||-++-
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r 93 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIAR 93 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHH
Confidence 3444444444444445689999 999998854
No 73
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=66.36 E-value=23 Score=28.67 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCC
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA 59 (146)
+-+...++++.+.--..++++++ ||+||.++...-... ..+..++.++|.
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~ 133 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPW 133 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCc
Confidence 33444555555431134789999 999998865421112 234677777764
No 74
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=65.07 E-value=13 Score=32.34 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHHHHH---cC--CCCccEEEE-eehhhHHHH-Hhhhh-cCCcCCceeeecCCccCC
Q psy18038 4 AKSLVEQASSIFRLYVQ---SG--RGFSRVVLI-YSACSSFLI-LSNTF-YSNLRTMFPGLDPAGPLF 63 (146)
Q Consensus 4 ~~~~~~~~~~~~~~l~~---~G--~~~~~v~li-~SlGahia~-~~~~~-~~~~lgrItgLDPA~P~F 63 (146)
.|++-++++-+-.-|.+ .+ .+++|+.|+ ||=|+..|. ++=.+ ..-+...++|+||-.-.-
T Consensus 93 i~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 93 IKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 34444455544444444 33 567899999 998888754 23111 333458899999987544
No 75
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=64.05 E-value=16 Score=30.63 Aligned_cols=43 Identities=5% Similarity=0.109 Sum_probs=26.2
Q ss_pred HHHHHHcCCCCccEEEE-eehhhHHHHH-hhhhcCCcCCceeeecCC
Q psy18038 15 FRLYVQSGRGFSRVVLI-YSACSSFLIL-SNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 15 ~~~l~~~G~~~~~v~li-~SlGahia~~-~~~~~~~~lgrItgLDPA 59 (146)
++.+.+. .+.+++++| ||+||.++.. +..... ++..++.+.|.
T Consensus 126 v~~l~~~-~~~~~i~lvGhS~GG~i~~~~~~~~~~-~v~~lv~~~~p 170 (350)
T TIGR01836 126 VDYICRT-SKLDQISLLGICQGGTFSLCYAALYPD-KIKNLVTMVTP 170 (350)
T ss_pred HHHHHHH-hCCCcccEEEECHHHHHHHHHHHhCch-heeeEEEeccc
Confidence 4444442 245789999 9999998653 333332 34667776553
No 76
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=63.67 E-value=17 Score=30.56 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-Hhhhh--cCCcCCceeeecCCcc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTF--YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~--~~~~lgrItgLDPA~P 61 (146)
.++.+.++.-+.-+.+ -.|-.-++|+ +|+||-+|. ++.++ -|+.+.+++=||+..|
T Consensus 45 ~~l~~~a~~yv~~Ir~-~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 45 ASLDDMAAAYVAAIRR-VQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCHHHHHHHHHHHHHH-hCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 4566666666666655 4555589999 999999976 77776 4555688999999988
No 77
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=63.19 E-value=12 Score=30.64 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=22.5
Q ss_pred cEEEE-eehhhHHHHHhhh-hc---CCcCCceeeecCCc
Q psy18038 27 RVVLI-YSACSSFLILSNT-FY---SNLRTMFPGLDPAG 60 (146)
Q Consensus 27 ~v~li-~SlGahia~~~~~-~~---~~~lgrItgLDPA~ 60 (146)
++.+. ||+||.+|..+-. .. ...|.++.-.|..|
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 58888 9999999765422 21 22347778888754
No 78
>KOG4627|consensus
Probab=58.26 E-value=16 Score=31.07 Aligned_cols=34 Identities=9% Similarity=-0.030 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
+..++...+.|....=-..+++++- ||.|||.|.
T Consensus 117 t~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~ 151 (270)
T KOG4627|consen 117 TMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAA 151 (270)
T ss_pred HHHHHHHHHHHHHHhcccceeEEEcccchHHHHHH
Confidence 3344455555555543334445555 999999964
No 79
>KOG4178|consensus
Probab=57.84 E-value=27 Score=30.60 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
++..++.++..+|...| .+|++++ |..||=+|.
T Consensus 95 t~~~l~~di~~lld~Lg--~~k~~lvgHDwGaivaw 128 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLG--LKKAFLVGHDWGAIVAW 128 (322)
T ss_pred eHHHHHHHHHHHHHHhc--cceeEEEeccchhHHHH
Confidence 46677888888888888 8999999 889998865
No 80
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=56.56 E-value=22 Score=23.60 Aligned_cols=29 Identities=28% Similarity=0.280 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEE
Q psy18038 3 SAKSLVEQASSIFRLYVQSGRGFSRVVLI 31 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~G~~~~~v~li 31 (146)
+.+.|.++++.+.++|++.|...+++.+-
T Consensus 32 ~~~~l~~~~~~l~~~y~~~GY~~s~v~~p 60 (76)
T PF08479_consen 32 TLADLQQLADALTNYYREKGYITSRVYLP 60 (76)
T ss_dssp -HHHHHHHHHHHHHHHHHTT-TT-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCceEEEEEeC
Confidence 45789999999999999999999998875
No 81
>PRK05855 short chain dehydrogenase; Validated
Probab=55.89 E-value=18 Score=31.53 Aligned_cols=34 Identities=15% Similarity=-0.057 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
++.++++++..++...+.+ ..++|+ ||+||.++.
T Consensus 75 ~~~~~a~dl~~~i~~l~~~-~~~~lvGhS~Gg~~a~ 109 (582)
T PRK05855 75 TLARLADDFAAVIDAVSPD-RPVHLLAHDWGSIQGW 109 (582)
T ss_pred CHHHHHHHHHHHHHHhCCC-CcEEEEecChHHHHHH
Confidence 4677888888888876632 349999 999997754
No 82
>PLN02324 triacylglycerol lipase
Probab=53.18 E-value=27 Score=31.61 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHHh
Q psy18038 6 SLVEQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~~ 42 (146)
|+++++-.-++.|.+ ..-+--+|++. |||||.+|.++
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLa 232 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLS 232 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHH
Confidence 566665554444444 32222368888 99999997653
No 83
>COG2947 Uncharacterized conserved protein [Function unknown]
Probab=52.55 E-value=12 Score=29.56 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eehh--hHHHHHhhhhcCCcCCceeeecCCccCCccC
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSAC--SSFLILSNTFYSNLRTMFPGLDPAGPLFESQ 66 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~SlG--ahia~~~~~~~~~~lgrItgLDPA~P~F~~~ 66 (146)
||..|||- +...+..++ ||-+ =+|+|+++-..... +-=|..|||.|.|+..
T Consensus 34 qARNfmR~-----M~iGD~~fFYHSNc~~pgIvGl~~V~~~a~-pD~tq~d~~spYyDPk 87 (156)
T COG2947 34 QARNFMRD-----MKIGDLGFFYHSNCKPPGIVGLAEVCALAH-PDPTQFDPASPYYDPK 87 (156)
T ss_pred HHHHHHHh-----cccCceEEEEecCCCCCCceehhhhhhccC-CCccccCCCCcccCcc
Confidence 56777765 344455566 8863 35666654443333 5669999999999853
No 84
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=51.75 E-value=27 Score=31.51 Aligned_cols=16 Identities=19% Similarity=0.063 Sum_probs=13.3
Q ss_pred CccEEEE-eehhhHHHH
Q psy18038 25 FSRVVLI-YSACSSFLI 40 (146)
Q Consensus 25 ~~~v~li-~SlGahia~ 40 (146)
.++++|| ||+||-++.
T Consensus 161 ~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 161 GKKVNIISHSMGGLLVK 177 (440)
T ss_pred CCCEEEEEECHhHHHHH
Confidence 4689999 999998854
No 85
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.33 E-value=24 Score=31.66 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=28.6
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 2 ESAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
||+.-=++.+.+++|.|.+. -+.++|||+ ||+|.-+..
T Consensus 168 eS~~~Sr~aLe~~lr~La~~-~~~~~I~ilAHSMGtwl~~ 206 (377)
T COG4782 168 ESTNYSRPALERLLRYLATD-KPVKRIYLLAHSMGTWLLM 206 (377)
T ss_pred hhhhhhHHHHHHHHHHHHhC-CCCceEEEEEecchHHHHH
Confidence 56666677777777877774 458899999 999987743
No 86
>PLN02802 triacylglycerol lipase
Probab=50.83 E-value=46 Score=30.96 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHHhh-hh--cCCcCCceeeecCCccCCccCCCCccccCCCCCeE
Q psy18038 6 SLVEQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLILSN-TF--YSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFV 80 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~~~-~~--~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fV 80 (146)
|+++++-.-++.|.+ ..-+--+|++. |||||.+|.++- .+ .+.....|+..-=++|..-+......++....++.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~~~~~~~~ 388 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLNARGVKVL 388 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEE
Confidence 555555444444433 32222367887 999999976532 22 11111245666556665444333345555556778
Q ss_pred EEEecC
Q psy18038 81 DVIHSN 86 (146)
Q Consensus 81 dvIHT~ 86 (146)
-|+|..
T Consensus 389 RVVN~~ 394 (509)
T PLN02802 389 RVVNAQ 394 (509)
T ss_pred EEecCC
Confidence 888854
No 87
>PLN02310 triacylglycerol lipase
Probab=50.30 E-value=24 Score=31.78 Aligned_cols=61 Identities=8% Similarity=0.119 Sum_probs=30.7
Q ss_pred ccEEEE-eehhhHHHHHhh-hhcCCcC-CceeeecCCccCCccCCCCccccCCCCCeEEEEecC
Q psy18038 26 SRVVLI-YSACSSFLILSN-TFYSNLR-TMFPGLDPAGPLFESQDPRSRLDSSDAQFVDVIHSN 86 (146)
Q Consensus 26 ~~v~li-~SlGahia~~~~-~~~~~~l-grItgLDPA~P~F~~~~~~~rL~~~DA~fVdvIHT~ 86 (146)
.+|++. |||||.+|.++- .+..... -.|+..-=+.|.--+......++....++.-|+|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~ 272 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQ 272 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECC
Confidence 478888 999999976542 2210000 123333334443322222234444455677777755
No 88
>PLN02753 triacylglycerol lipase
Probab=49.78 E-value=37 Score=31.77 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHH-c---CCCCccEEEE-eehhhHHHHHhh-h-----hcC---CcCCceeeecCCccCCccCCCCcc
Q psy18038 6 SLVEQASSIFRLYVQ-S---GRGFSRVVLI-YSACSSFLILSN-T-----FYS---NLRTMFPGLDPAGPLFESQDPRSR 71 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~---G~~~~~v~li-~SlGahia~~~~-~-----~~~---~~lgrItgLDPA~P~F~~~~~~~r 71 (146)
|+++++-.-++.|.+ . +.+--+|++. |||||.+|.++- . ++. ...-.|+..-=+.|.--+.....+
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~aFA~~ 367 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNVRFKDR 367 (531)
T ss_pred hHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCHHHHHH
Confidence 566666554544443 2 3345688888 999999976531 1 110 011234555445555443333334
Q ss_pred ccCCCCCeEEEEecCC
Q psy18038 72 LDSSDAQFVDVIHSNG 87 (146)
Q Consensus 72 L~~~DA~fVdvIHT~~ 87 (146)
++....++.-|+|..-
T Consensus 368 ~~~l~~~~lRVVN~~D 383 (531)
T PLN02753 368 MEELGVKVLRVVNVHD 383 (531)
T ss_pred HHhcCCCEEEEEeCCC
Confidence 5444566778888653
No 89
>PLN02571 triacylglycerol lipase
Probab=49.44 E-value=32 Score=31.05 Aligned_cols=82 Identities=15% Similarity=0.066 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHH-cCCCCccEEEE-eehhhHHHHHh-hh-----hcC-----CcCCceeeecCCccCCccCCCCccc
Q psy18038 6 SLVEQASSIFRLYVQ-SGRGFSRVVLI-YSACSSFLILS-NT-----FYS-----NLRTMFPGLDPAGPLFESQDPRSRL 72 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G~~~~~v~li-~SlGahia~~~-~~-----~~~-----~~lgrItgLDPA~P~F~~~~~~~rL 72 (146)
|++++.-.-++.|.+ ..-.--+|++. |||||.+|.++ -. ++. +..-.|++.-=+.|..-+......+
T Consensus 205 Sar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN~~Fa~~~ 284 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGDSDFKKLF 284 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccCHHHHHHH
Confidence 555555444444443 22111257888 99999997653 11 211 1112356655566654433222334
Q ss_pred cCC-CCCeEEEEecCC
Q psy18038 73 DSS-DAQFVDVIHSNG 87 (146)
Q Consensus 73 ~~~-DA~fVdvIHT~~ 87 (146)
+.. ..++..|+|.+-
T Consensus 285 ~~~~~~~~~RVvN~~D 300 (413)
T PLN02571 285 SGLKDLRVLRVRNLPD 300 (413)
T ss_pred hcccCccEEEEEeCCC
Confidence 332 456778888653
No 90
>PLN02847 triacylglycerol lipase
Probab=49.24 E-value=33 Score=32.75 Aligned_cols=40 Identities=8% Similarity=-0.003 Sum_probs=24.0
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHHHh
Q psy18038 2 ESAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~ 42 (146)
++|+.+.+.....+..+.+ ..+-=++.++ |||||-+|.+.
T Consensus 228 ~AArwI~~~i~~~L~kal~-~~PdYkLVITGHSLGGGVAALL 268 (633)
T PLN02847 228 AAARWIAKLSTPCLLKALD-EYPDFKIKIVGHSLGGGTAALL 268 (633)
T ss_pred HHHHHHHHHHHHHHHHHHH-HCCCCeEEEeccChHHHHHHHH
Confidence 3566666554443333333 3444477777 99999997654
No 91
>PLN02761 lipase class 3 family protein
Probab=47.06 E-value=34 Score=31.91 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHH-cC---C-CCccEEEE-eehhhHHHHHhh------hhcC----CcCCceeeecCCccCCccCCCC
Q psy18038 6 SLVEQASSIFRLYVQ-SG---R-GFSRVVLI-YSACSSFLILSN------TFYS----NLRTMFPGLDPAGPLFESQDPR 69 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G---~-~~~~v~li-~SlGahia~~~~------~~~~----~~lgrItgLDPA~P~F~~~~~~ 69 (146)
|+++++-.-++.|.+ .+ - +.-+|++. |||||.+|.++- .++. ..--.|+..-=++|.--+....
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~~FA 348 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNLRFK 348 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCHHHH
Confidence 666666555555554 32 1 33478888 999999976532 1110 1101255554455544333323
Q ss_pred ccccCCCCCeEEEEecC
Q psy18038 70 SRLDSSDAQFVDVIHSN 86 (146)
Q Consensus 70 ~rL~~~DA~fVdvIHT~ 86 (146)
.+++....++.-|+|..
T Consensus 349 ~~~d~l~~~~lRVvN~~ 365 (527)
T PLN02761 349 ERCDELGVKVLRVVNVH 365 (527)
T ss_pred HHHHhcCCcEEEEEcCC
Confidence 34544445566666654
No 92
>PLN03037 lipase class 3 family protein; Provisional
Probab=45.77 E-value=50 Score=30.83 Aligned_cols=61 Identities=8% Similarity=0.107 Sum_probs=33.1
Q ss_pred ccEEEE-eehhhHHHHHhh-hh--cCCcCCceeeecCCccCCccCCCCccccCCCCCeEEEEecC
Q psy18038 26 SRVVLI-YSACSSFLILSN-TF--YSNLRTMFPGLDPAGPLFESQDPRSRLDSSDAQFVDVIHSN 86 (146)
Q Consensus 26 ~~v~li-~SlGahia~~~~-~~--~~~~lgrItgLDPA~P~F~~~~~~~rL~~~DA~fVdvIHT~ 86 (146)
-+|++. |||||.+|.++- .+ +..-+..++..-=+.|.--+......++.-...+.-|+|.+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~~ 382 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVNKQ 382 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEECC
Confidence 368888 999999976532 11 11111245554445565443332334444455677777754
No 93
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=45.63 E-value=69 Score=26.88 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHcC--CCCccEEEE-eehhhHHHH
Q psy18038 6 SLVEQASSIFRLYVQSG--RGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G--~~~~~v~li-~SlGahia~ 40 (146)
+..+..+++-.++.... .+-..++|+ ||+||-|+.
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~ 122 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIAL 122 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHH
Confidence 35556666666666544 567789998 999998865
No 94
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=45.35 E-value=32 Score=29.96 Aligned_cols=34 Identities=18% Similarity=0.044 Sum_probs=22.2
Q ss_pred CccEEEE-eehhhHHHHH-hhhh-----cCCcCCceeeecC
Q psy18038 25 FSRVVLI-YSACSSFLIL-SNTF-----YSNLRTMFPGLDP 58 (146)
Q Consensus 25 ~~~v~li-~SlGahia~~-~~~~-----~~~~lgrItgLDP 58 (146)
-.+|+|| ||+|+.++.. -+.. ..+.|.+++.+-|
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCC
Confidence 5789999 9999988642 2222 2344577777643
No 95
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=44.88 E-value=1e+02 Score=22.29 Aligned_cols=56 Identities=13% Similarity=-0.032 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-Hhhhh--cCCcCCceeeecCCccCC
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTF--YSNLRTMFPGLDPAGPLF 63 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~--~~~~lgrItgLDPA~P~F 63 (146)
+...++.+...+.+ -.+-.+++++ ||+|+.++. ++.++ .+..+..+.-+|+..|..
T Consensus 46 ~~~~~~~~~~~l~~-~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~~~ 105 (212)
T smart00824 46 ADALVEAQAEAVLR-AAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPPGD 105 (212)
T ss_pred HHHHHHHHHHHHHH-hcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCCCC
Confidence 33444444444443 2234568888 999998864 44444 233446777777766653
No 96
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=44.73 E-value=26 Score=28.29 Aligned_cols=33 Identities=6% Similarity=0.006 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEEeehhhHHHH
Q psy18038 8 VEQASSIFRLYVQSGRGFSRVVLIYSACSSFLI 40 (146)
Q Consensus 8 ~~~~~~~~~~l~~~G~~~~~v~li~SlGahia~ 40 (146)
..++..+++.|...|++.+++++|-.+|.|-..
T Consensus 71 ~~il~~ll~~L~~~Gv~~~~i~ii~A~G~Hr~~ 103 (204)
T PF09861_consen 71 DLILPALLEELEEAGVKDEDITIIIALGTHRPM 103 (204)
T ss_dssp HHHHHHHHHHHHT-T-TT-EEEEEEE-TTS---
T ss_pred HHHHHHHHHHHHhcCCCccCEEEEEeCCCCCCC
Confidence 467788889999999999999999999988743
No 97
>PLN02872 triacylglycerol lipase
Probab=44.48 E-value=16 Score=32.11 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=25.8
Q ss_pred CccEEEE-eehhhHHHHHhhhh--cCCcCCceeeecCCccC
Q psy18038 25 FSRVVLI-YSACSSFLILSNTF--YSNLRTMFPGLDPAGPL 62 (146)
Q Consensus 25 ~~~v~li-~SlGahia~~~~~~--~~~~lgrItgLDPA~P~ 62 (146)
.+++++| ||+||-++..+-.. ..+++....+|.|+...
T Consensus 159 ~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 159 NSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred CCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhh
Confidence 4789999 99999886533211 11234778889998754
No 98
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=44.09 E-value=51 Score=26.12 Aligned_cols=55 Identities=9% Similarity=0.191 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHc-CCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCccCCcc
Q psy18038 10 QASSIFRLYVQS-GRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAGPLFES 65 (146)
Q Consensus 10 ~~~~~~~~l~~~-G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~P~F~~ 65 (146)
+-.+-+++|.+. .++.++|-|+ .|-||-+|...-.+..++ ..+..+-|..-.|..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i-~avVa~~ps~~~~~~ 61 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQI-SAVVAISPSSVVFQG 61 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSE-EEEEEES--SB--SS
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCc-cEEEEeCCceeEecc
Confidence 444556777775 6888999999 889999987543333344 788888888777663
No 99
>PRK10985 putative hydrolase; Provisional
Probab=43.40 E-value=77 Score=26.25 Aligned_cols=44 Identities=14% Similarity=0.069 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcCC-cCCceeeecC
Q psy18038 14 IFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYSN-LRTMFPGLDP 58 (146)
Q Consensus 14 ~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~~-~lgrItgLDP 58 (146)
+++.+.+. .+.++++++ ||+||.++. .......+ .+..++.+.|
T Consensus 120 ~i~~l~~~-~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~ 166 (324)
T PRK10985 120 FLRWLQRE-FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSA 166 (324)
T ss_pred HHHHHHHh-CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcC
Confidence 44555542 345679999 999998743 33333222 2345555544
No 100
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=42.85 E-value=17 Score=31.89 Aligned_cols=38 Identities=18% Similarity=-0.098 Sum_probs=20.9
Q ss_pred CCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCcc
Q psy18038 23 RGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~P 61 (146)
+++++|.+. ||+||--+.-+-+...+ +..-+.|||..-
T Consensus 225 lD~~~i~~~GHSFGGATa~~~l~~d~r-~~~~I~LD~W~~ 263 (379)
T PF03403_consen 225 LDLSRIGLAGHSFGGATALQALRQDTR-FKAGILLDPWMF 263 (379)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH-TT---EEEEES---T
T ss_pred cchhheeeeecCchHHHHHHHHhhccC-cceEEEeCCccc
Confidence 457889999 99987664432111122 256679999963
No 101
>PLN02511 hydrolase
Probab=41.73 E-value=67 Score=27.70 Aligned_cols=25 Identities=8% Similarity=0.040 Sum_probs=17.2
Q ss_pred HHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 15 FRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 15 ~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
++.+.+. .+-+++++| ||+||.++.
T Consensus 163 i~~l~~~-~~~~~~~lvG~SlGg~i~~ 188 (388)
T PLN02511 163 VDHVAGR-YPSANLYAAGWSLGANILV 188 (388)
T ss_pred HHHHHHH-CCCCCEEEEEechhHHHHH
Confidence 3444332 455689999 999999954
No 102
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=40.23 E-value=71 Score=31.22 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHHH-Hhhhh--cCCcCCceeeecCCcc
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTF--YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~--~~~~lgrItgLDPA~P 61 (146)
.++.++++.+...+.... +...++++ ||+||-+|. ++.++ .+..+..++-+|+..|
T Consensus 1113 ~~l~~la~~~~~~i~~~~-~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1113 TSLDEVCEAHLATLLEQQ-PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred CCHHHHHHHHHHHHHhhC-CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 477888888888887643 23468999 999999975 56655 2334466666776444
No 103
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=39.53 E-value=43 Score=27.25 Aligned_cols=49 Identities=31% Similarity=0.327 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCCCccEEEE-eehhhHHHH-HhhhhcC---CcCCceeeecCCc
Q psy18038 11 ASSIFRLYVQSGRGFSRVVLI-YSACSSFLI-LSNTFYS---NLRTMFPGLDPAG 60 (146)
Q Consensus 11 ~~~~~~~l~~~G~~~~~v~li-~SlGahia~-~~~~~~~---~~lgrItgLDPA~ 60 (146)
++.+++.|.+ --.-.++.|| +|+||-+.- +-+++.. +++..+.=|-|+.
T Consensus 54 l~~~i~~y~~-~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 54 LARIIRHYRA-RWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHHHHHHH-HhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 3344444444 2345789999 999999844 4466622 2335666666654
No 104
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=39.30 E-value=1.1e+02 Score=26.73 Aligned_cols=53 Identities=9% Similarity=-0.100 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHcC--CCCccEEEE-eehhhHHHHH-hhhhc-CCcCCceeeecCC
Q psy18038 7 LVEQASSIFRLYVQSG--RGFSRVVLI-YSACSSFLIL-SNTFY-SNLRTMFPGLDPA 59 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G--~~~~~v~li-~SlGahia~~-~~~~~-~~~lgrItgLDPA 59 (146)
+..+++++..++...+ .+-.+++|+ ||+||-++.. +.+-. ...+..++-..|+
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPA 244 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcc
Confidence 3344444444444432 333479999 9999988653 32111 1133556666665
No 105
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=38.59 E-value=70 Score=26.16 Aligned_cols=25 Identities=24% Similarity=0.182 Sum_probs=20.1
Q ss_pred cCCCCccEEEE-eehhhHHHH-Hhhhh
Q psy18038 21 SGRGFSRVVLI-YSACSSFLI-LSNTF 45 (146)
Q Consensus 21 ~G~~~~~v~li-~SlGahia~-~~~~~ 45 (146)
.|+++++|.+. +|.|||++. ++...
T Consensus 147 ~g~dp~~i~v~GdSAGG~La~~~a~~~ 173 (312)
T COG0657 147 LGIDPSRIAVAGDSAGGHLALALALAA 173 (312)
T ss_pred hCCCccceEEEecCcccHHHHHHHHHH
Confidence 58999999999 999999954 44433
No 106
>KOG3101|consensus
Probab=38.39 E-value=13 Score=31.60 Aligned_cols=47 Identities=9% Similarity=-0.049 Sum_probs=27.6
Q ss_pred HHHHHHHHHcC--CCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecC
Q psy18038 12 SSIFRLYVQSG--RGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 12 ~~~~~~l~~~G--~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDP 58 (146)
.+|.+.+.... +++.++-+. ||+|+|.|.++..-+..+-.-+.+.-|
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 34444444333 667788888 999999987653222222245555444
No 107
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=38.10 E-value=1e+02 Score=25.59 Aligned_cols=51 Identities=18% Similarity=0.103 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhhc--CCcCCceeeecCCcc
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTFY--SNLRTMFPGLDPAGP 61 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~~--~~~lgrItgLDPA~P 61 (146)
.+.+|.+.+.+.|..++.+.+--..|+.+++++..+. +.. .||+|.+|++.
T Consensus 160 ~~~Ei~~q~~~~~~~~d~vv~~~GtGgt~~G~~~~~~~~~~~-~~ii~V~~~~~ 212 (307)
T cd06449 160 FVLEIAQQEEELGFKFDSIVVCSVTGSTHAGLSVGLAALGRQ-RRVIGIDASAK 212 (307)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhcCCC-CeEEEEEecCc
Confidence 3445555554444456555443556788888876552 223 59999999874
No 108
>KOG1515|consensus
Probab=37.10 E-value=81 Score=27.52 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=30.1
Q ss_pred HHHcCCCCccEEEE-eehhhHHHH-Hhhhhc---CCcCCceeeecCCccCCc
Q psy18038 18 YVQSGRGFSRVVLI-YSACSSFLI-LSNTFY---SNLRTMFPGLDPAGPLFE 64 (146)
Q Consensus 18 l~~~G~~~~~v~li-~SlGahia~-~~~~~~---~~~lgrItgLDPA~P~F~ 64 (146)
+...|.+++++.|. -|.||.+|. ++.+.. ... .+|.|.==--|.|-
T Consensus 158 ~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~-~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 158 WLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSK-PKIKGQILIYPFFQ 208 (336)
T ss_pred HHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCC-cceEEEEEEecccC
Confidence 66689999999999 788999954 676653 122 45555433334443
No 109
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=36.91 E-value=75 Score=22.71 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCccEEEEee-hhh
Q psy18038 5 KSLVEQASSIFRLYVQ-SGRGFSRVVLIYS-ACS 36 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~-~G~~~~~v~li~S-lGa 36 (146)
+.-.++...|.++|.+ .|+++++|+++++ .-+
T Consensus 72 e~k~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~ 105 (116)
T PTZ00397 72 SNNSSIAAAITKILASHLKVKSERVYIEFKDCSA 105 (116)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEEEEEEECCh
Confidence 3445677788888888 5999999999844 443
No 110
>PLN02719 triacylglycerol lipase
Probab=35.99 E-value=44 Score=31.15 Aligned_cols=81 Identities=15% Similarity=0.173 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHH-cCC---CCccEEEE-eehhhHHHHHhh-h-----hc---CCcCCceeeecCCccCCccCCCCcc
Q psy18038 6 SLVEQASSIFRLYVQ-SGR---GFSRVVLI-YSACSSFLILSN-T-----FY---SNLRTMFPGLDPAGPLFESQDPRSR 71 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~-~G~---~~~~v~li-~SlGahia~~~~-~-----~~---~~~lgrItgLDPA~P~F~~~~~~~r 71 (146)
|+++++-.-++.|.+ ..- +.-+|++. |||||.+|.++- . ++ ....-.|+..-=+.|.--+.....+
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~~Fa~~ 353 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNIRFKER 353 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCHHHHHH
Confidence 677766555555544 221 23468888 999999976531 1 11 1111235555555554433322334
Q ss_pred ccCCCCCeEEEEecC
Q psy18038 72 LDSSDAQFVDVIHSN 86 (146)
Q Consensus 72 L~~~DA~fVdvIHT~ 86 (146)
++.....+.-|+|..
T Consensus 354 ~~~~~~~~lRVvN~~ 368 (518)
T PLN02719 354 IEELGVKVLRVVNEH 368 (518)
T ss_pred HHhcCCcEEEEEeCC
Confidence 444445566666654
No 111
>COG3076 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.58 E-value=37 Score=25.92 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=31.8
Q ss_pred ChhhhHHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHH
Q psy18038 1 MESAKSLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSF 38 (146)
Q Consensus 1 ~~~~~~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahi 38 (146)
||-...++.-++.|+.-|...|-+|+-++.| |++-+|=
T Consensus 1 ~~~l~~~~~ETR~IIe~LL~DGSdPdALY~IEHHl~~~d 39 (135)
T COG3076 1 PELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADD 39 (135)
T ss_pred ChhHHHHHHHHHHHHHHHHhcCCCcchhhhhhhhhhhhH
Confidence 4555677888889999999999999999999 9987664
No 112
>PLN00413 triacylglycerol lipase
Probab=35.53 E-value=60 Score=30.01 Aligned_cols=29 Identities=21% Similarity=0.212 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCCCCccEEEE-eehhhHHHHHh
Q psy18038 12 SSIFRLYVQSGRGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 12 ~~~~~~l~~~G~~~~~v~li-~SlGahia~~~ 42 (146)
+.+-+.+.+ .+-.++++. |||||.+|.++
T Consensus 272 ~~Lk~ll~~--~p~~kliVTGHSLGGALAtLa 301 (479)
T PLN00413 272 RHLKEIFDQ--NPTSKFILSGHSLGGALAILF 301 (479)
T ss_pred HHHHHHHHH--CCCCeEEEEecCHHHHHHHHH
Confidence 334444433 456688888 99999997754
No 113
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=34.25 E-value=74 Score=25.96 Aligned_cols=24 Identities=17% Similarity=0.173 Sum_probs=15.6
Q ss_pred HHHHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 14 IFRLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 14 ~~~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
+-+-|...|- ||-|| ||+|+-++-
T Consensus 66 I~~Vl~~TGa---kVDIVgHS~G~~iaR 90 (219)
T PF01674_consen 66 IDAVLAYTGA---KVDIVGHSMGGTIAR 90 (219)
T ss_dssp HHHHHHHHT-----EEEEEETCHHHHHH
T ss_pred HHHHHHhhCC---EEEEEEcCCcCHHHH
Confidence 3344455676 99999 999987753
No 114
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=34.18 E-value=78 Score=27.43 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=22.6
Q ss_pred hhhHHHHHhhhhcCCcC-CceeeecCCc-cCCc
Q psy18038 34 ACSSFLILSNTFYSNLR-TMFPGLDPAG-PLFE 64 (146)
Q Consensus 34 lGahia~~~~~~~~~~l-grItgLDPA~-P~F~ 64 (146)
-|++++++++++..+.- -||++.||++ |.|.
T Consensus 179 TGGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~ 211 (300)
T COG0031 179 TGGTITGVARYLKERNPNVRIVAVDPEGSVLLS 211 (300)
T ss_pred cchhHHHHHHHHHhhCCCcEEEEECCCCCcccC
Confidence 47899999987733221 3999999995 6664
No 115
>KOG4409|consensus
Probab=34.13 E-value=12 Score=33.27 Aligned_cols=58 Identities=19% Similarity=0.153 Sum_probs=34.9
Q ss_pred EEEEeehhhHHHHHhhhhcC-CcCCceeeecCCccCCccCCCCccccCCC--CCeEEEEecC
Q psy18038 28 VVLIYSACSSFLILSNTFYS-NLRTMFPGLDPAGPLFESQDPRSRLDSSD--AQFVDVIHSN 86 (146)
Q Consensus 28 v~li~SlGahia~~~~~~~~-~~lgrItgLDPA~P~F~~~~~~~rL~~~D--A~fVdvIHT~ 86 (146)
+.+||=.||.++.+.++|.+ -+...+.+.|.=|-.+.+.+.. -.|++- -.|||.|+|=
T Consensus 93 lVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F-~~d~~~~e~~fvesiE~W 153 (365)
T KOG4409|consen 93 LVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKF-SIDPTTAEKEFVESIEQW 153 (365)
T ss_pred EEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCC-CCCcccchHHHHHHHHHH
Confidence 45568899999888777632 2247899999877444332211 111111 1677777764
No 116
>PRK11191 RNase E inhibitor protein; Provisional
Probab=33.88 E-value=77 Score=24.42 Aligned_cols=28 Identities=14% Similarity=0.124 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEE-eeh
Q psy18038 7 LVEQASSIFRLYVQSGRGFSRVVLI-YSA 34 (146)
Q Consensus 7 ~~~~~~~~~~~l~~~G~~~~~v~li-~Sl 34 (146)
.+.....+++.|.+.|-++++.+.| |++
T Consensus 10 q~~~~~eVi~~L~edGsd~~~~~~IEH~~ 38 (138)
T PRK11191 10 QREETREIIEELLEDGSDPDALYTIEHHF 38 (138)
T ss_pred HHHHHHHHHHHHHHcCCCcCCCEEEEEEE
Confidence 3666788999999999999999999 885
No 117
>PRK06352 threonine synthase; Validated
Probab=33.66 E-value=1.2e+02 Score=26.14 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=29.7
Q ss_pred HHHHHHHcCCCCccEEEEeehhhHHHHHhhhhc------CCcCCceeeecCCcc
Q psy18038 14 IFRLYVQSGRGFSRVVLIYSACSSFLILSNTFY------SNLRTMFPGLDPAGP 61 (146)
Q Consensus 14 ~~~~l~~~G~~~~~v~li~SlGahia~~~~~~~------~~~lgrItgLDPA~P 61 (146)
-.+.+.|.+..++-+.+=-+.|+.++++++.|. +....||+|.+|++.
T Consensus 166 ~~EI~~Q~~~~~D~vvv~vG~GG~~~Gi~~~lk~~~~~~~~~~~~vi~Vep~g~ 219 (351)
T PRK06352 166 AFEICEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEAEGA 219 (351)
T ss_pred HHHHHHHcCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCCCCCEEEEEeeCCC
Confidence 345566666555544443446778878765541 223379999999764
No 118
>PLN02162 triacylglycerol lipase
Probab=33.37 E-value=66 Score=29.71 Aligned_cols=20 Identities=15% Similarity=0.029 Sum_probs=15.4
Q ss_pred CCCccEEEE-eehhhHHHHHh
Q psy18038 23 RGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~~~ 42 (146)
.+-.++++. |||||.+|.++
T Consensus 275 ~p~~kliVTGHSLGGALAtLa 295 (475)
T PLN02162 275 NKNLKYILTGHSLGGALAALF 295 (475)
T ss_pred CCCceEEEEecChHHHHHHHH
Confidence 455678888 99999997653
No 119
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=33.18 E-value=85 Score=27.42 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=23.1
Q ss_pred HHHHHHHHH---HHHHHcCCCCccEEEE-eehhhHHHH
Q psy18038 7 LVEQASSIF---RLYVQSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 7 ~~~~~~~~~---~~l~~~G~~~~~v~li-~SlGahia~ 40 (146)
|.++...|- +.+...|.++++|+|. +|.||+.+.
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~ 191 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVS 191 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhh
Confidence 445544433 2233359999999999 999998754
No 120
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=32.33 E-value=56 Score=25.38 Aligned_cols=52 Identities=8% Similarity=-0.107 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCC
Q psy18038 8 VEQASSIFRLYVQS-GRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPA 59 (146)
Q Consensus 8 ~~~~~~~~~~l~~~-G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA 59 (146)
.-+.++|+.++.+. .+..++..|+ +|+||..|...-.....+-+.+.++.|+
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 34556666666663 4444445555 8999988765433333334677787766
No 121
>KOG3724|consensus
Probab=32.32 E-value=72 Score=31.75 Aligned_cols=53 Identities=13% Similarity=0.054 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHHHHHc-CCC---CccEEEE-eehhhHHHHHh---hhhcCCcCCceeee
Q psy18038 4 AKSLVEQASSIFRLYVQS-GRG---FSRVVLI-YSACSSFLILS---NTFYSNLRTMFPGL 56 (146)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~-G~~---~~~v~li-~SlGahia~~~---~~~~~~~lgrItgL 56 (146)
++-+.+-...|..+|+++ ..+ |..|.|| ||+||=+|... +++..+-+..|+.|
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 344444445566777772 233 6789999 99999887643 54544444666655
No 122
>PF01187 MIF: Macrophage migration inhibitory factor (MIF); InterPro: IPR001398 Macrophage migration inhibitory factor (MIF) is a key regulatory cytokine within innate and adaptive immune responses, capable of promoting and modulating the magnitude of the response []. MIF is released from T-cells and macrophages, and acts within the neuroendocrine system. MIF is capable of tautomerase activity, although its biological function has not been fully characterised. It is induced by glucocorticoid and is capable of overriding the anti-inflammatory actions of glucocorticoid []. MIF regulates cytokine secretion and the expression of receptors involved in the immune response. It can be taken up into target cells in order to interact with intracellular signalling molecules, inhibiting p53 function, and/or activating components of the mitogen-activated protein kinase and Jun-activation domain-binding protein-1 (Jab-1) []. MIF has been linked to various inflammatory diseases, such as rheumatoid arthritis and atherosclerosis []. The MIF homologue D-dopachrome tautomerase (4.1.1.84 from EC) is involved in detoxification through the conversion of dopaminechrome (and possibly norepinephrinechrome), the toxic quinine product of the neurotransmitter dopamine (and norepinephrine), to an indole derivative that can serve as a precursor to neuromelanin [, ].; PDB: 1UIZ_C 3FWT_A 1HFO_F 2WKB_D 3RF4_B 2OS5_A 3RF5_A 2XCZ_A 3FWU_A 3B64_A ....
Probab=32.25 E-value=90 Score=22.38 Aligned_cols=34 Identities=9% Similarity=-0.036 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCccEEEE-eehhhHH
Q psy18038 5 KSLVEQASSIFRLYVQ-SGRGFSRVVLI-YSACSSF 38 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~-~G~~~~~v~li-~SlGahi 38 (146)
+.-.+++..|.+++.+ .|++.+|+++. +-+-++-
T Consensus 70 ~~n~~~s~~i~~~l~~~LgIp~~Riyi~f~d~~~~~ 105 (114)
T PF01187_consen 70 EQNKKYSAAITEFLEEELGIPPDRIYINFHDLPAWN 105 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHT--GGGEEEEEEEETGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCceEEEEEECCHHH
Confidence 3446788889999977 59999999998 5465443
No 123
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=31.70 E-value=1.5e+02 Score=23.34 Aligned_cols=34 Identities=24% Similarity=0.171 Sum_probs=21.4
Q ss_pred CCccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCcc
Q psy18038 24 GFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 24 ~~~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~P 61 (146)
..+++.|| .||||-.|. ++.++.- +. .-+.||-.
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~~---~a-vLiNPav~ 92 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYGL---PA-VLINPAVR 92 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhCC---CE-EEEcCCCC
Confidence 33448899 778988865 5666642 22 55666654
No 124
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=31.45 E-value=64 Score=24.80 Aligned_cols=30 Identities=3% Similarity=0.074 Sum_probs=23.8
Q ss_pred HHHHHHHHHcC-CCCccEEEE-eehhhHHHHH
Q psy18038 12 SSIFRLYVQSG-RGFSRVVLI-YSACSSFLIL 41 (146)
Q Consensus 12 ~~~~~~l~~~G-~~~~~v~li-~SlGahia~~ 41 (146)
...+++|.+.. ++.++|-+| +|.||.++..
T Consensus 83 ~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~ 114 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPGKIGVVGFCWGGKLALL 114 (218)
T ss_dssp HHHHHHHHCTTTCEEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHhccccCCCcEEEEEEecchHHhhh
Confidence 34467777766 888999999 9999999763
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=30.69 E-value=70 Score=26.09 Aligned_cols=21 Identities=19% Similarity=0.015 Sum_probs=17.8
Q ss_pred HcCCCCccEEEE-eehhhHHHH
Q psy18038 20 QSGRGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 20 ~~G~~~~~v~li-~SlGahia~ 40 (146)
+.++++++|++. +|.||-.+.
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~ 112 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMAN 112 (220)
T ss_pred hcccCCCceeeEEECHHHHHHH
Confidence 468999999999 999987753
No 126
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=30.68 E-value=73 Score=26.77 Aligned_cols=14 Identities=14% Similarity=0.235 Sum_probs=11.5
Q ss_pred cEEEE-eehhhHHHH
Q psy18038 27 RVVLI-YSACSSFLI 40 (146)
Q Consensus 27 ~v~li-~SlGahia~ 40 (146)
.++|+ ||+||.++.
T Consensus 143 p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 143 PMYIIGLSMGGNIAL 157 (332)
T ss_pred ceeEeeccCccHHHH
Confidence 47888 999998865
No 127
>KOG2369|consensus
Probab=30.38 E-value=77 Score=29.31 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEE-eehhhHHH
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLI-YSACSSFL 39 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li-~SlGahia 39 (146)
.|.+....|...+.-+| -++|.|| ||+|+.+.
T Consensus 164 yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 164 YLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHHHHHcC--CCceEEEecCCccHHH
Confidence 34455555555555444 4689999 99999874
No 128
>PRK03922 hypothetical protein; Provisional
Probab=29.84 E-value=31 Score=26.04 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=13.1
Q ss_pred CccccCCCCCeEEEE
Q psy18038 69 RSRLDSSDAQFVDVI 83 (146)
Q Consensus 69 ~~rL~~~DA~fVdvI 83 (146)
..||+|+|++||++=
T Consensus 32 GkrLn~~~l~yVeie 46 (113)
T PRK03922 32 GKRLNPEDLDYVEVE 46 (113)
T ss_pred HhhcCcccCCeEEEe
Confidence 469999999999983
No 129
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.79 E-value=77 Score=26.79 Aligned_cols=106 Identities=11% Similarity=0.074 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCcc-EEEE-eehhhHHHH-HhhhhcCCcC--CceeeecCCccCCccCCCCccccCCCCCeE
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSR-VVLI-YSACSSFLI-LSNTFYSNLR--TMFPGLDPAGPLFESQDPRSRLDSSDAQFV 80 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~-v~li-~SlGahia~-~~~~~~~~~l--grItgLDPA~P~F~~~~~~~rL~~~DA~fV 80 (146)
++...||.|..-|.. ..+++ +.++ ||+||-+|. +++++...-+ ......=-..|..... ......+|++|+
T Consensus 55 di~~Lad~la~el~~--~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~--~~i~~~~D~~~l 130 (244)
T COG3208 55 DIESLADELANELLP--PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG--KQIHHLDDADFL 130 (244)
T ss_pred cHHHHHHHHHHHhcc--ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc--CCccCCCHHHHH
Confidence 445556666555543 33443 7777 999999987 7777632221 1122222233433332 234567788888
Q ss_pred EEEec-CCcc---ccc-ccCCCCCCCCceeEEcCCCC-CCC
Q psy18038 81 DVIHS-NGEN---LIL-GGLGSWQPLGHVDFYPNGGR-MQK 115 (146)
Q Consensus 81 dvIHT-~~~~---l~~-g~lG~~~~~Gh~DFypNGG~-~QP 115 (146)
+-|-- ++.+ +.- ..+-+.-|+=-+||..+.+. .+|
T Consensus 131 ~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~ 171 (244)
T COG3208 131 ADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPP 171 (244)
T ss_pred HHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCC
Confidence 75532 2111 000 01112235556788888874 344
No 130
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=29.00 E-value=89 Score=20.91 Aligned_cols=23 Identities=17% Similarity=0.343 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHcCCCCccEEEE
Q psy18038 9 EQASSIFRLYVQSGRGFSRVVLI 31 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~li 31 (146)
+-|..+.++|++.|++.+++.+.
T Consensus 54 ~RA~~V~~~L~~~gi~~~ri~~~ 76 (97)
T PF00691_consen 54 RRAEAVKQYLVENGIPPERISVV 76 (97)
T ss_dssp HHHHHHHHHHHHTTSSGGGEEEE
T ss_pred HHHHHHHHHHHHcCCChHhEEEE
Confidence 35778889999999999999775
No 131
>KOG2112|consensus
Probab=28.78 E-value=1.7e+02 Score=24.20 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHH---HHcCCCCccEEEE-eehhhHHHHHh
Q psy18038 5 KSLVEQASSIFRLY---VQSGRGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 5 ~~~~~~~~~~~~~l---~~~G~~~~~v~li-~SlGahia~~~ 42 (146)
.++.+.++.+..++ .+.|+++++|.+- +|.||-++.+.
T Consensus 69 ~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~ 110 (206)
T KOG2112|consen 69 EGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYS 110 (206)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHH
Confidence 34445555544444 4479999999998 89887776544
No 132
>PRK13604 luxD acyl transferase; Provisional
Probab=28.35 E-value=1.1e+02 Score=26.47 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCCCccEEEE-eehhhHHHHH
Q psy18038 11 ASSIFRLYVQSGRGFSRVVLI-YSACSSFLIL 41 (146)
Q Consensus 11 ~~~~~~~l~~~G~~~~~v~li-~SlGahia~~ 41 (146)
+...++++.+.+ .+++.|+ ||+||-++..
T Consensus 95 l~aaid~lk~~~--~~~I~LiG~SmGgava~~ 124 (307)
T PRK13604 95 LLTVVDWLNTRG--INNLGLIAASLSARIAYE 124 (307)
T ss_pred HHHHHHHHHhcC--CCceEEEEECHHHHHHHH
Confidence 344466776653 5789999 9999988754
No 133
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=28.25 E-value=71 Score=30.80 Aligned_cols=85 Identities=25% Similarity=0.322 Sum_probs=49.1
Q ss_pred hhhhHHHHHH--HHHH---HHHHHcCC-CCccEEEE-eehhhHHHH-Hhhh---hcCCcC---Cce----eeecCCccCC
Q psy18038 2 ESAKSLVEQA--SSIF---RLYVQSGR-GFSRVVLI-YSACSSFLI-LSNT---FYSNLR---TMF----PGLDPAGPLF 63 (146)
Q Consensus 2 ~~~~~~~~~~--~~~~---~~l~~~G~-~~~~v~li-~SlGahia~-~~~~---~~~~~l---grI----tgLDPA~P~F 63 (146)
|.+|-|.|+- ++|+ +.|++.|+ ..+++.++ +|.||-+.| ++|. ++..+| +-+ |=|||.-|+=
T Consensus 497 e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT 576 (682)
T COG1770 497 EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLT 576 (682)
T ss_pred HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCC
Confidence 4556555542 3444 78899995 46688888 999988744 4432 222111 111 4599999984
Q ss_pred ccCCCCccccCCCCCeEEEEecCC
Q psy18038 64 ESQDPRSRLDSSDAQFVDVIHSNG 87 (146)
Q Consensus 64 ~~~~~~~rL~~~DA~fVdvIHT~~ 87 (146)
...-+ +==+|.|+++-+.|-+..
T Consensus 577 ~~E~~-EWGNP~d~e~y~yikSYS 599 (682)
T COG1770 577 VTEWD-EWGNPLDPEYYDYIKSYS 599 (682)
T ss_pred ccchh-hhCCcCCHHHHHHHhhcC
Confidence 43211 122455666766666554
No 134
>PF08602 Mgr1: Mgr1-like, i-AAA protease complex subunit; InterPro: IPR013911 The Saccharomyces cerevisiae (Baker's yeast) Mgr1 protein has been shown to be required for mitochondrial viability in yeast lacking mitochondrial DNA. It is a mitochondrial inner membrane protein, which interacts with Yme1 and is a new subunit of the i-AAA protease complex [, ].
Probab=27.85 E-value=74 Score=28.46 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=26.8
Q ss_pred hhhhHHH--HHHHHHHHHHHHcCCCCccEEEE-eehh
Q psy18038 2 ESAKSLV--EQASSIFRLYVQSGRGFSRVVLI-YSAC 35 (146)
Q Consensus 2 ~~~~~~~--~~~~~~~~~l~~~G~~~~~v~li-~SlG 35 (146)
|.||+.| +.-.+|+++|++ |+++.|+.+= .+.|
T Consensus 152 eEAk~~R~kkffndiik~yhe-gidptk~kvkd~~sg 187 (363)
T PF08602_consen 152 EEAKSYRDKKFFNDIIKYYHE-GIDPTKIKVKDAMSG 187 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCcceeEeeecCCC
Confidence 6788887 456889999987 9999999987 5554
No 135
>PF07984 DUF1693: Domain of unknown function (DUF1693) ; InterPro: IPR012937 This domain occurs in many hypothetical proteins. It also occurs in some prion-like proteins.
Probab=27.19 E-value=57 Score=28.68 Aligned_cols=53 Identities=21% Similarity=0.040 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhhcCCcCCceeeecC
Q psy18038 6 SLVEQASSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~~~~~lgrItgLDP 58 (146)
++.++...+-..|.+.|++..+|-|.||..+|+..--....-+-+.-|.++|.
T Consensus 31 ~l~~LI~~Vr~~L~~~GI~VkdVRLNGsaAShVL~~~~~~~Y~DLDlIF~V~l 83 (320)
T PF07984_consen 31 RLKDLIQVVRDRLEERGIPVKDVRLNGSAASHVLSSDNGQSYNDLDLIFSVDL 83 (320)
T ss_pred eHHHHHHHHHHHHHHcCCCccceEEecceeeeeeccCCCCCccccceEEEecC
Confidence 46788888889999999999999999999888843211122222355666653
No 136
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=26.87 E-value=1.3e+02 Score=18.64 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=23.1
Q ss_pred hhhHHHHHHHHHHHHHHH-cCCCCccEEEE
Q psy18038 3 SAKSLVEQASSIFRLYVQ-SGRGFSRVVLI 31 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~-~G~~~~~v~li 31 (146)
+....++++..|.+.+.+ .|++++++.++
T Consensus 13 s~eqk~~l~~~it~~l~~~~~~p~~~v~V~ 42 (61)
T PRK02220 13 TEEQLKALVKDVTAAVSKNTGAPAEHIHVI 42 (61)
T ss_pred CHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 456677788888888876 59999999887
No 137
>PRK06608 threonine dehydratase; Provisional
Probab=26.76 E-value=1.8e+02 Score=24.86 Aligned_cols=48 Identities=10% Similarity=0.001 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCCCccEEEEeehhhHHHHHhhhh--cCCcCCceeeecCCcc
Q psy18038 13 SIFRLYVQSGRGFSRVVLIYSACSSFLILSNTF--YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 13 ~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~--~~~~lgrItgLDPA~P 61 (146)
.-.+.+.|.+.+++.+.+--..|+.++|++..+ .+.. .||+|.+|++-
T Consensus 160 ~a~Ei~~q~~~~~D~vv~~vG~GGt~~Gi~~~~k~~~~~-~~vigVep~~~ 209 (338)
T PRK06608 160 LCYEALQQLGFSPDAIFASCGGGGLISGTYLAKELISPT-SLLIGSEPLNA 209 (338)
T ss_pred HHHHHHHhcCCCcCEEEEeechhHHHHHHHHHHHhcCCC-CEEEEEeeCCC
Confidence 345666676666665444344567777776544 2333 69999999763
No 138
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair]
Probab=25.64 E-value=1.6e+02 Score=26.08 Aligned_cols=77 Identities=23% Similarity=0.386 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEEee--hh-hHHH-HHhhhhcCCcCCceeeecCCccCCccCCC----CccccCCC
Q psy18038 5 KSLVEQASSIFRLYVQSGRGFSRVVLIYS--AC-SSFL-ILSNTFYSNLRTMFPGLDPAGPLFESQDP----RSRLDSSD 76 (146)
Q Consensus 5 ~~~~~~~~~~~~~l~~~G~~~~~v~li~S--lG-ahia-~~~~~~~~~~lgrItgLDPA~P~F~~~~~----~~rL~~~D 76 (146)
..+.++.+.|++.=...+-.++.+-|.+= +| --.| .+++.++.+. |+| +||..+..+. ...|.+.|
T Consensus 32 ~~vk~~L~ifI~AAk~r~e~lDHvLl~GPPGlGKTTLA~IIA~Emgvn~--k~t----sGp~leK~gDlaaiLt~Le~~D 105 (332)
T COG2255 32 EKVKEQLQIFIKAAKKRGEALDHVLLFGPPGLGKTTLAHIIANELGVNL--KIT----SGPALEKPGDLAAILTNLEEGD 105 (332)
T ss_pred HHHHHHHHHHHHHHHhcCCCcCeEEeeCCCCCcHHHHHHHHHHHhcCCe--Eec----ccccccChhhHHHHHhcCCcCC
Confidence 45778889999888888999998888744 44 2233 3678887666 665 4677776532 24688999
Q ss_pred CCeEEEEecCC
Q psy18038 77 AQFVDVIHSNG 87 (146)
Q Consensus 77 A~fVdvIHT~~ 87 (146)
--|+|=||-=+
T Consensus 106 VLFIDEIHrl~ 116 (332)
T COG2255 106 VLFIDEIHRLS 116 (332)
T ss_pred eEEEehhhhcC
Confidence 99999999544
No 139
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=25.57 E-value=2.1e+02 Score=24.28 Aligned_cols=49 Identities=16% Similarity=0.080 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhh--cCCcCCceeeecCCcc
Q psy18038 12 SSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTF--YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 12 ~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~--~~~~lgrItgLDPA~P 61 (146)
.+|.+.+.+.+..++.|.+--..|+.++++++.+ .+.. .||+|.+|.+.
T Consensus 176 ~Ei~eq~~~~~~~~D~vvv~vGtGgt~aGl~~~~~~~~~~-~~vigV~~~~~ 226 (337)
T TIGR01274 176 FEVREQEGELGFKFDYVVVCSVTGSTQAGMVAGFAADGRK-DRVIGIDASAT 226 (337)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCC-CeEEEEEecCC
Confidence 3344444334556776644455677777776544 2333 69999999985
No 140
>PRK07868 acyl-CoA synthetase; Validated
Probab=25.30 E-value=1.3e+02 Score=29.52 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHc-CCCCccEEEE-eehhhHHHH-HhhhhcCCcCCceee
Q psy18038 6 SLVEQASSIFRLYVQS-GRGFSRVVLI-YSACSSFLI-LSNTFYSNLRTMFPG 55 (146)
Q Consensus 6 ~~~~~~~~~~~~l~~~-G~~~~~v~li-~SlGahia~-~~~~~~~~~lgrItg 55 (146)
++.+++..|.+.|... .+..+++||+ ||+||-++. ++-....+.+.+++-
T Consensus 120 ~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl 172 (994)
T PRK07868 120 NLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVT 172 (994)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEE
Confidence 5566666666665431 1223589999 999999864 333333333466664
No 141
>KOG2382|consensus
Probab=25.06 E-value=1.3e+02 Score=26.27 Aligned_cols=51 Identities=16% Similarity=0.027 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHcCC--CCccEEEE-eehhh-HHHHHhhhhcCCcCCceeeecC
Q psy18038 8 VEQASSIFRLYVQSGR--GFSRVVLI-YSACS-SFLILSNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 8 ~~~~~~~~~~l~~~G~--~~~~v~li-~SlGa-hia~~~~~~~~~~lgrItgLDP 58 (146)
..+|++..-|+..-+- -..++.|+ ||+|+ +++..--......+.|.+-+|=
T Consensus 103 ~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~ 157 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDI 157 (315)
T ss_pred HHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEec
Confidence 3567788888887653 46678888 99998 5544322233334466666663
No 142
>PRK10717 cysteine synthase A; Provisional
Probab=24.96 E-value=1.9e+02 Score=24.25 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhh---cCCcCCceeeecCCcc
Q psy18038 12 SSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTF---YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 12 ~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~---~~~~lgrItgLDPA~P 61 (146)
+.-.+.+.|.+..++-+.+--..|+.++++++.| ..+. ||.|.+|++.
T Consensus 164 t~a~Ei~~ql~~~~d~iv~~vG~GG~~~Gi~~~~k~~~~~~--~vi~Vep~~~ 214 (330)
T PRK10717 164 TTGPEIWEQTDGKVDGFVCAVGTGGTLAGVSRYLKETNPKV--KIVLADPTGS 214 (330)
T ss_pred hHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHhCCCC--EEEEEcCCCC
Confidence 3344556666655543322244677888877655 3333 9999999885
No 143
>cd00474 SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation factor 1) fold is found in eukaryotes, archaea, and some bacteria and is thought to play an important role in accurate initiator codon recognition during translation initiation. This fold, which includes two antiparallel alpha helices packed against the same side of a five-strand beta sheet, is structurally similar to other RNA-binding domains suggesting that SUI1/eIF1 may bind RNA. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown.
Probab=24.79 E-value=66 Score=22.16 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHcCCCCccEE
Q psy18038 9 EQASSIFRLYVQSGRGFSRVV 29 (146)
Q Consensus 9 ~~~~~~~~~l~~~G~~~~~v~ 29 (146)
|+.+.+.++|.+.|+..+++-
T Consensus 55 D~r~~v~~~L~~~g~~~~~i~ 75 (77)
T cd00474 55 DQRKKIKEFLIKMGFAKDNIK 75 (77)
T ss_pred cHHHHHHHHHHHcCCCHHHeE
Confidence 578889999999999887764
No 144
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=24.67 E-value=99 Score=30.28 Aligned_cols=18 Identities=17% Similarity=-0.088 Sum_probs=14.7
Q ss_pred CCCccEEEE-eehhhHHHH
Q psy18038 23 RGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~ 40 (146)
++..+++++ |||||-++.
T Consensus 552 ~~~~~V~~lGHSLGgiig~ 570 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGT 570 (792)
T ss_pred CCCCcEEEEecCHHHHHHH
Confidence 566789999 999988854
No 145
>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions. In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.
Probab=24.39 E-value=1.8e+02 Score=25.05 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=24.3
Q ss_pred CCCccEEEEeehhhHHHHHhhhhcCCcCCceeeecCCc
Q psy18038 23 RGFSRVVLIYSACSSFLILSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 23 ~~~~~v~li~SlGahia~~~~~~~~~~lgrItgLDPA~ 60 (146)
..++-|.+--+.|+.+++++..+......||+|.+|++
T Consensus 201 ~~~D~vv~~vG~GGt~~Gi~~g~~~~~~~~vigVep~g 238 (365)
T cd06446 201 ELPDVVIACVGGGSNAAGLFYPFINDKDVKLIGVEAGG 238 (365)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHhCCCceEEEEcCCC
Confidence 34555444355678888877533222247999999987
No 146
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=24.26 E-value=2.3e+02 Score=23.83 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhh---cCCcCCceeeecCCcc
Q psy18038 11 ASSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTF---YSNLRTMFPGLDPAGP 61 (146)
Q Consensus 11 ~~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~---~~~~lgrItgLDPA~P 61 (146)
+.+|.+.+...|..++.+.+=-..|+.+++++..+ +.+. +|+|.+|++.
T Consensus 170 ~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~--~vigVe~~~~ 221 (331)
T PRK03910 170 ALEIAQQLAEGGVDFDAVVVASGSGGTHAGLAAGLAALGPDI--PVIGVTVSRS 221 (331)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCC--eEEEEEecCC
Confidence 34444444433445654433344577777877555 3333 7899999874
No 147
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=24.00 E-value=2.1e+02 Score=24.23 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhhcC-CcCCceeeecCCc
Q psy18038 11 ASSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTFYS-NLRTMFPGLDPAG 60 (146)
Q Consensus 11 ~~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~~~-~~lgrItgLDPA~ 60 (146)
+-+|.+.+.+.+.+++.|.+=-..|+.+++++..|.. ....||+|.+|.+
T Consensus 176 a~Ei~~q~~~~~~~~d~vvv~vGtGgtlaGi~~~~k~~~~~~rvigV~~~~ 226 (337)
T PRK12390 176 AEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVIGIDASA 226 (337)
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcchhHHHHHHHHHhcCCCceEEEEEecC
Confidence 3344444334554565544435567888888766622 1226999999976
No 148
>PLN02934 triacylglycerol lipase
Probab=23.89 E-value=1.4e+02 Score=27.89 Aligned_cols=20 Identities=20% Similarity=0.155 Sum_probs=15.5
Q ss_pred CCCccEEEE-eehhhHHHHHh
Q psy18038 23 RGFSRVVLI-YSACSSFLILS 42 (146)
Q Consensus 23 ~~~~~v~li-~SlGahia~~~ 42 (146)
.+-.++++. |||||.+|.++
T Consensus 318 ~p~~kIvVTGHSLGGALAtLa 338 (515)
T PLN02934 318 HKNAKFVVTGHSLGGALAILF 338 (515)
T ss_pred CCCCeEEEeccccHHHHHHHH
Confidence 455688888 99999997654
No 149
>PRK04940 hypothetical protein; Provisional
Probab=23.87 E-value=2.1e+02 Score=22.85 Aligned_cols=31 Identities=6% Similarity=-0.109 Sum_probs=19.6
Q ss_pred ccEEEE-eehhhHHHH-HhhhhcCCcCCceeeecCCc
Q psy18038 26 SRVVLI-YSACSSFLI-LSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 26 ~~v~li-~SlGahia~-~~~~~~~~~lgrItgLDPA~ 60 (146)
+.+.|| .||||--|- ++.+++- |-.-+.||-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~----~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI----RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC----CEEEECCCC
Confidence 458889 678988764 5666653 224455554
No 150
>PRK12391 tryptophan synthase subunit beta; Reviewed
Probab=23.76 E-value=1.9e+02 Score=25.92 Aligned_cols=48 Identities=21% Similarity=0.152 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCCccEEEEeehhhHHHHHhhhh-----cCCcCCceeeecCCc
Q psy18038 13 SIFRLYVQSGRGFSRVVLIYSACSSFLILSNTF-----YSNLRTMFPGLDPAG 60 (146)
Q Consensus 13 ~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~-----~~~~lgrItgLDPA~ 60 (146)
++.+.+...|..++-|.+--..|+.++|++.-| .+....||+|.+|++
T Consensus 242 Ei~~Ql~~~g~~pD~Vv~~vG~Gg~~aGi~~~f~~~~~~g~~~~riiaVEp~~ 294 (427)
T PRK12391 242 EAKKQLELAGEYPDVVIGCVGGGSNFAGLAFPFLGDKLEGKKDTRFIAVEPAA 294 (427)
T ss_pred HHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHHHhcCCCCceEEEEeecc
Confidence 333444334455654333245667777776422 331236999999975
No 151
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=22.63 E-value=2.9e+02 Score=24.45 Aligned_cols=53 Identities=6% Similarity=-0.082 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHc-C--CCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCc
Q psy18038 8 VEQASSIFRLYVQS-G--RGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAG 60 (146)
Q Consensus 8 ~~~~~~~~~~l~~~-G--~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~ 60 (146)
.-++++++-++.+. . -+.++..|. +|+||-.+.....-...+.+.+..+-|+-
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 33455555555553 3 466778888 99999887654444444458888888773
No 152
>PRK14717 putative glycine/sarcosine/betaine reductase complex protein A; Provisional
Probab=22.42 E-value=94 Score=23.19 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=21.3
Q ss_pred CCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecC
Q psy18038 22 GRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDP 58 (146)
Q Consensus 22 G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDP 58 (146)
.+..+|+.+| ++.-|-.++++ ...+|.=||
T Consensus 15 k~g~eNvvV~lG~aeaEaagla-------AETVt~GDP 45 (107)
T PRK14717 15 KYGAENIVVILGAAEAEAAGLA-------AETVTNGDP 45 (107)
T ss_pred hcCCccEEEEecCcchhhccce-------eeeeccCCC
Confidence 4578888887 88877777764 256666666
No 153
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=22.28 E-value=2.7e+02 Score=24.69 Aligned_cols=53 Identities=15% Similarity=0.256 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCCccEEEE-eehhhHHHHHhhhhcCCcCCceeeecCCcc--CCcc
Q psy18038 11 ASSIFRLYVQSGRGFSRVVLI-YSACSSFLILSNTFYSNLRTMFPGLDPAGP--LFES 65 (146)
Q Consensus 11 ~~~~~~~l~~~G~~~~~v~li-~SlGahia~~~~~~~~~~lgrItgLDPA~P--~F~~ 65 (146)
+..|..-+.+.|.. ++-+. .|+|||+|.++-....+.+.-+-.|-|+.+ -|..
T Consensus 162 ~~~Ll~Wl~~~G~~--~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~ 217 (348)
T PF09752_consen 162 SRALLHWLEREGYG--PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTE 217 (348)
T ss_pred HHHHHHHHHhcCCC--ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhh
Confidence 34445555555655 78888 999999988776555555566666666554 4554
No 154
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=22.24 E-value=1.3e+02 Score=20.79 Aligned_cols=25 Identities=12% Similarity=0.127 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eeh
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSA 34 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~Sl 34 (146)
....+++.|.+.|.++++-+.| |++
T Consensus 5 ~n~~vl~~L~~~Gddl~~~r~ieh~~ 30 (104)
T PF06877_consen 5 ENREVLEALEEDGDDLSKPRPIEHWF 30 (104)
T ss_dssp HHHHHHHHHHHHT--TTS-EEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEEEE
Confidence 4557788999999999999999 775
No 155
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=21.54 E-value=2.2e+02 Score=23.66 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCCccEEEEeehhhHHHHHhhhhc--CCcCCceeeecCCcc
Q psy18038 12 SSIFRLYVQSGRGFSRVVLIYSACSSFLILSNTFY--SNLRTMFPGLDPAGP 61 (146)
Q Consensus 12 ~~~~~~l~~~G~~~~~v~li~SlGahia~~~~~~~--~~~lgrItgLDPA~P 61 (146)
+.-.+.+.|.+-.++.+.+--..|+.++|++..+. ... .||+|.+|++.
T Consensus 151 t~~~Ei~~q~~~~~d~iv~~vG~Gg~~~Gv~~~lk~~~~~-~kvi~Vep~~~ 201 (290)
T TIGR01138 151 STGPEIWQQTGGRITHFVSSMGTTGTIMGVSRFLKEQNPP-VQIVGLQPEEG 201 (290)
T ss_pred hHHHHHHHHcCCCCCEEEECCCchHHHHHHHHHHHHhCCC-CEEEEEeCCCC
Confidence 33445566655344433222446777778775552 222 59999999873
No 156
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.31 E-value=1.3e+02 Score=26.17 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHc--C-CCCccEEEE-eehhhHHHH
Q psy18038 9 EQASSIFRLYVQS--G-RGFSRVVLI-YSACSSFLI 40 (146)
Q Consensus 9 ~~~~~~~~~l~~~--G-~~~~~v~li-~SlGahia~ 40 (146)
+-.+.++++|+.. | ...++|.|+ ||-|.|-..
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl 123 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVL 123 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHH
Confidence 3445677888886 3 678999999 999999854
No 157
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=21.05 E-value=1.7e+02 Score=24.34 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHcCCCCccEEEE-eehhhHHH
Q psy18038 10 QASSIFRLYVQSGRGFSRVVLI-YSACSSFL 39 (146)
Q Consensus 10 ~~~~~~~~l~~~G~~~~~v~li-~SlGahia 39 (146)
.+...++.|.+ -..++++-+| ||+|+-++
T Consensus 88 wl~~vl~~L~~-~Y~~~~~N~VGHSmGg~~~ 117 (255)
T PF06028_consen 88 WLKKVLKYLKK-KYHFKKFNLVGHSMGGLSW 117 (255)
T ss_dssp HHHHHHHHHHH-CC--SEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCEEeEEEECccHHHH
Confidence 34445555544 6779999999 99998774
No 158
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=20.67 E-value=1.6e+02 Score=21.60 Aligned_cols=27 Identities=15% Similarity=0.133 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHH-cCCCCccEEEEee
Q psy18038 7 LVEQASSIFRLYVQ-SGRGFSRVVLIYS 33 (146)
Q Consensus 7 ~~~~~~~~~~~l~~-~G~~~~~v~li~S 33 (146)
=.++...|.++|.+ .|++.+|+++-+.
T Consensus 74 n~~~s~~i~~~l~~~LgIp~dRiYI~f~ 101 (113)
T PTZ00450 74 PKMMTPRITAAITKECGIPAERIYVFYY 101 (113)
T ss_pred HHHHHHHHHHHHHHHcCCCcccEEEEEE
Confidence 35677788888876 5999999999844
No 159
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=20.65 E-value=1.9e+02 Score=16.61 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEE
Q psy18038 4 AKSLVEQASSIFRLYVQSGRGFSRVV 29 (146)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~G~~~~~v~ 29 (146)
-.++++.+....+|....|.-|.-|.
T Consensus 7 ~~~~~d~a~rv~~f~~~ngRlPnyV~ 32 (33)
T PF09373_consen 7 KEEYLDMASRVNNFYESNGRLPNYVS 32 (33)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeee
Confidence 35688999999999999998877654
No 160
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=20.07 E-value=2.3e+02 Score=17.83 Aligned_cols=30 Identities=7% Similarity=-0.001 Sum_probs=22.9
Q ss_pred hhhHHHHHHHHHHHHHHH-cCCCCccEEEEe
Q psy18038 3 SAKSLVEQASSIFRLYVQ-SGRGFSRVVLIY 32 (146)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~-~G~~~~~v~li~ 32 (146)
|.....+++..+.+.+.+ .|.|.+.+.++.
T Consensus 13 s~EqK~~L~~~it~a~~~~~~~p~~~v~V~i 43 (60)
T PRK02289 13 SQEQKNALAREVTEVVSRIAKAPKEAIHVFI 43 (60)
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEEE
Confidence 445667777778877777 599999999873
No 161
>PLN02618 tryptophan synthase, beta chain
Probab=20.05 E-value=2.7e+02 Score=24.95 Aligned_cols=43 Identities=19% Similarity=0.140 Sum_probs=28.3
Q ss_pred HHcCCCCccEEEEeehhhHHHHHhhhhcCCcCCceeeecCCcc
Q psy18038 19 VQSGRGFSRVVLIYSACSSFLILSNTFYSNLRTMFPGLDPAGP 61 (146)
Q Consensus 19 ~~~G~~~~~v~li~SlGahia~~~~~~~~~~lgrItgLDPA~P 61 (146)
.+.|..++.|.+--..|+.++|+...|....--||+|.+|++-
T Consensus 234 ~~~g~~pD~VV~~VGgGg~~~Gi~~~f~~~~~v~ligVEa~G~ 276 (410)
T PLN02618 234 EKWGGKPDVLVACVGGGSNAMGLFHEFIDDEDVRLIGVEAAGF 276 (410)
T ss_pred HHhCCCCCEEEEEeCchHHHHHHHHHHHhCCCceEEEEEeCCC
Confidence 4556556655443556777878776663333369999999985
Done!