Query psy18040
Match_columns 82
No_of_seqs 140 out of 761
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 20:57:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hpl_A Lipase; hydrolase(carbo 99.9 1.3E-23 4.3E-28 149.7 5.8 78 3-81 255-338 (449)
2 1rp1_A Pancreatic lipase relat 99.9 1.2E-23 4.1E-28 149.8 5.5 78 3-81 255-338 (450)
3 1bu8_A Protein (pancreatic lip 99.9 1.3E-23 4.5E-28 149.4 4.9 78 3-81 256-339 (452)
4 1w52_X Pancreatic lipase relat 99.9 1.2E-23 4.2E-28 149.5 2.9 75 6-81 259-339 (452)
5 1gpl_A RP2 lipase; serine este 99.8 1.5E-21 5.2E-26 137.8 4.2 73 8-81 243-321 (432)
6 1u7l_A Vacuolar ATP synthase s 24.9 16 0.00054 25.7 0.1 20 12-31 305-328 (392)
7 2xk0_A Polycomb protein PCL; t 12.4 70 0.0024 17.0 0.7 8 66-73 28-35 (69)
8 4hcz_A PHD finger protein 1; p 11.3 81 0.0028 16.1 0.7 8 66-73 16-23 (58)
9 2x5r_A Hypothetical protein OR 9.1 1.2E+02 0.0039 17.2 0.9 8 66-73 100-107 (127)
10 3ech_C 25-MER fragment of prot 8.8 1E+02 0.0036 12.7 0.5 7 15-21 17-23 (25)
No 1
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=99.89 E-value=1.3e-23 Score=149.67 Aligned_cols=78 Identities=27% Similarity=0.548 Sum_probs=69.5
Q ss_pred ccCCceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCC
Q psy18040 3 SAKSLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDE 76 (82)
Q Consensus 3 ~~~~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~ 76 (82)
++.+.+.|||.| ++||+|||.++++|+|++|++|++|+.|.|..|.. ..|+.||+++++.. .+|+|||.|+++
T Consensus 255 ~~~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~yl~T~~~ 333 (449)
T 1hpl_A 255 GTRDFAACNHLRSYKYYTDSILNPDGFAGFSCASYSDFTANKCFPCSS-EGCPQMGHYADRFPGRTKGVGQLFYLNTGDA 333 (449)
T ss_dssp TSSCCCCHHHHHHHHHHHHHHHCTTSCBCEECSCHHHHHTTCSCSCCT-TCCCBSSTTGGGCTTTTSSSSEEEEECCCSS
T ss_pred ccccCCccCchhHHHHHHHHhCCCCCceeeeCCCHHHHhcCCccCCCC-CcccccCccCcccccccccccceEEeccccc
Confidence 345678899999 99999999988999999999999999999998864 46899999998663 289999999999
Q ss_pred CCCCC
Q psy18040 77 EPFCG 81 (82)
Q Consensus 77 ~Pf~~ 81 (82)
+|||+
T Consensus 334 ~Pf~~ 338 (449)
T 1hpl_A 334 SNFAR 338 (449)
T ss_dssp SSCCC
T ss_pred CCccc
Confidence 99986
No 2
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=99.88 E-value=1.2e-23 Score=149.81 Aligned_cols=78 Identities=29% Similarity=0.561 Sum_probs=68.4
Q ss_pred ccCCceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCC
Q psy18040 3 SAKSLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDE 76 (82)
Q Consensus 3 ~~~~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~ 76 (82)
++.+.+.|||.| ++||+|||.++++|+|++|++|++|+.|.|..|.. ..|+.||+++++.. .+|+|||.|+++
T Consensus 255 ~~~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~yl~T~~~ 333 (450)
T 1rp1_A 255 GTRDFVACNHLRSYKYYSESILNPDGFASYPCASYRAFESNKCFPCPD-QGCPQMGHYADKFAVKTSDETQKYFLNTGDS 333 (450)
T ss_dssp TCSCCCCHHHHHHHHHHHHHHHCTTTTBCEECSCHHHHHTTCSCSCCT-TCCCBSSGGGGGCC-------CEEEECCCSS
T ss_pred ccccccccCchhHHHHHHHHhccCCCceeeeCCCHHHHhCCCccCCCC-CcccccCccCccccccccccceeEEeccccc
Confidence 345678899999 99999999988999999999999999999998864 46899999998763 289999999999
Q ss_pred CCCCC
Q psy18040 77 EPFCG 81 (82)
Q Consensus 77 ~Pf~~ 81 (82)
+|||+
T Consensus 334 ~Pf~~ 338 (450)
T 1rp1_A 334 SNFAR 338 (450)
T ss_dssp SCCCC
T ss_pred CCccc
Confidence 99986
No 3
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=99.88 E-value=1.3e-23 Score=149.37 Aligned_cols=78 Identities=33% Similarity=0.593 Sum_probs=69.3
Q ss_pred ccCCceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCC
Q psy18040 3 SAKSLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDE 76 (82)
Q Consensus 3 ~~~~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~ 76 (82)
++.+.+.|||.| ++||+|||.++++|+|++|+||++|+.|.|..|.. ..|+.||+++++.. .+|+|||.|+++
T Consensus 256 ~~~~~~~CsH~ra~~~~~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~~l~t~~~ 334 (452)
T 1bu8_A 256 GTQNFVACNHLRSYKYYASSILNPDGFLGYPCSSYEKFQQNDCFPCPE-EGCPKMGHYADQFEGKTATVEQTVYLNTGDS 334 (452)
T ss_dssp TSSCCCCHHHHHHHHHHHHHHHCGGGCBCEECSCHHHHHTTCSCSCCT-TCCCBSSGGGGGCTTTTSSSSEEEEECCCSS
T ss_pred ccccccccCchhHHHHHHHHcCCCCCceeeeCCCHHHHhCCCccCCCc-CcccccCccccccccccccccceEEEecCCC
Confidence 345678899999 99999999988999999999999999999998864 46899999998663 289999999999
Q ss_pred CCCCC
Q psy18040 77 EPFCG 81 (82)
Q Consensus 77 ~Pf~~ 81 (82)
+|||+
T Consensus 335 ~Pf~~ 339 (452)
T 1bu8_A 335 GNFTR 339 (452)
T ss_dssp TTCCC
T ss_pred CCCcc
Confidence 99986
No 4
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=99.87 E-value=1.2e-23 Score=149.50 Aligned_cols=75 Identities=32% Similarity=0.561 Sum_probs=67.3
Q ss_pred Cceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCCCCC
Q psy18040 6 SLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDEEPF 79 (82)
Q Consensus 6 ~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~~Pf 79 (82)
+.+.|||.| ++||+|||.++++|+|++|.||++|+.|.|..|.. ..|+.||+++++.. .+|+|||.|++++||
T Consensus 259 ~~~~CsH~ra~~~~~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~~l~t~~~~Pf 337 (452)
T 1w52_X 259 DYLACNHLKSFEYYSSSILNPDGFLAYPCDSYDKFQENGCFPCPA-GGCPKMGHYADQYKEKTSAVEQTFFLNTGESGDY 337 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCBCEECSCHHHHHTTCSCSCCT-TCCCBSSGGGGGCTTTTSSSSEEEEECCCSSTTC
T ss_pred cccccCchhHHHHHHHHcCCCCCceeeeCCCHHHHhCCCccCCCc-CcccccCccccccccccccccceEEEeccccCCc
Confidence 356799999 99999999988999999999999999999998864 45899999998663 289999999999999
Q ss_pred CC
Q psy18040 80 CG 81 (82)
Q Consensus 80 ~~ 81 (82)
|+
T Consensus 338 ~~ 339 (452)
T 1w52_X 338 TS 339 (452)
T ss_dssp CC
T ss_pred cc
Confidence 96
No 5
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.83 E-value=1.5e-21 Score=137.78 Aligned_cols=73 Identities=29% Similarity=0.536 Sum_probs=66.1
Q ss_pred eeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCCCCCCC
Q psy18040 8 VEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDEEPFCG 81 (82)
Q Consensus 8 ~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~~Pf~~ 81 (82)
+.|||.| ++||+|||.++++|+|++|++|++|+.|.|..|.. ..|+.||+++++.. .+|+|||.|++++|||+
T Consensus 243 ~~Csh~ra~~~~~esi~~~~~f~a~~c~~~~~~~~~~c~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~~l~t~~~~pf~~ 321 (432)
T 1gpl_A 243 ISCNHHRSIEYYHSSILNPEGFLGYPCASYDEFQESGCFPCPA-KGCPKMGHFADQYPGKTNAVEQTFFLNTGASDNFTR 321 (432)
T ss_dssp TTHHHHHHHHHHHHHHHCGGGGBCEECSCHHHHHTTCSCSCCT-TCCCBSSTTGGGCTTTTSSSSEEEEECCCSSTTCCC
T ss_pred cccchhhHHHHHHHHcCCcCCceeEeCCCHHHHhcCCCcCCCC-CcccccCccccccccccccccceEEEecCCCCCCcc
Confidence 5799999 99999999988899999999999999999998864 45899999998663 28999999999999986
No 6
>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1
Probab=24.91 E-value=16 Score=25.72 Aligned_cols=20 Identities=25% Similarity=0.174 Sum_probs=16.1
Q ss_pred ccc-HHHHHhhcCC---CCCceee
Q psy18040 12 SMK-TRKGESSILP---RCNFPAL 31 (82)
Q Consensus 12 H~R-~~yf~ESI~~---~~~F~a~ 31 (82)
|.. .+.|.|||+. |-.|.++
T Consensus 305 HiKalRvFVESVLRYGLP~~F~a~ 328 (392)
T 1u7l_A 305 HIKALRVYVESVLRYGLPPHFNIK 328 (392)
T ss_dssp HHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred HHhhHHhhhhhhhhcCCCCcceEE
Confidence 899 9999999975 4567763
No 7
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=12.42 E-value=70 Score=16.96 Aligned_cols=8 Identities=50% Similarity=0.750 Sum_probs=6.5
Q ss_pred ceeEEEec
Q psy18040 66 RGTLYLLT 73 (82)
Q Consensus 66 ~G~~yl~T 73 (82)
.|.|||-|
T Consensus 28 DG~fYLGt 35 (69)
T 2xk0_A 28 DGRFYLGT 35 (69)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEE
Confidence 58899876
No 8
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=11.28 E-value=81 Score=16.13 Aligned_cols=8 Identities=63% Similarity=0.787 Sum_probs=6.4
Q ss_pred ceeEEEec
Q psy18040 66 RGTLYLLT 73 (82)
Q Consensus 66 ~G~~yl~T 73 (82)
-|.|||-|
T Consensus 16 DG~fYlGt 23 (58)
T 4hcz_A 16 DGLLYLGT 23 (58)
T ss_dssp TSCEEEEE
T ss_pred CCCEEeEE
Confidence 58899876
No 9
>2x5r_A Hypothetical protein ORF126; unknown function, viral protein; 2.00A {Pyrobaculum spherical virus}
Probab=9.06 E-value=1.2e+02 Score=17.18 Aligned_cols=8 Identities=50% Similarity=0.742 Sum_probs=6.2
Q ss_pred ceeEEEec
Q psy18040 66 RGTLYLLT 73 (82)
Q Consensus 66 ~G~~yl~T 73 (82)
.|.|||..
T Consensus 100 ngtyylda 107 (127)
T 2x5r_A 100 NGTYYLDA 107 (127)
T ss_dssp TTTEEEEE
T ss_pred cCcEEeee
Confidence 68899874
No 10
>3ech_C 25-MER fragment of protein ARMR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa}
Probab=8.82 E-value=1e+02 Score=12.66 Aligned_cols=7 Identities=0% Similarity=-0.505 Sum_probs=5.1
Q ss_pred HHHHHhh
Q psy18040 15 TRKGESS 21 (82)
Q Consensus 15 ~~yf~ES 21 (82)
|++|+|-
T Consensus 17 wdly~eh 23 (25)
T 3ech_C 17 WDLYGEH 23 (26)
T ss_dssp HHHHHSC
T ss_pred HHHHHHh
Confidence 7888773
Done!