Your job contains 1 sequence.
>psy18049
MQTTTMTITTENRNPFQNCFLVSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGET
KFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFSRLTRLTRTPLDLPPPATPTPG
ARGDGFISPTGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQ
FAQGEWCGVELDEPIGKNDGNLGM
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18049
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 446 1.3e-40 1
UNIPROTKB|E1BQI8 - symbol:CLIP2 "Uncharacterized protein"... 245 7.3e-36 2
UNIPROTKB|E2QWB0 - symbol:CLIP1 "Uncharacterized protein"... 251 5.8e-35 2
UNIPROTKB|E2QWD0 - symbol:CLIP1 "Uncharacterized protein"... 251 5.8e-35 2
UNIPROTKB|P30622 - symbol:CLIP1 "CAP-Gly domain-containin... 249 9.5e-35 2
RGD|67404 - symbol:Clip1 "CAP-GLY domain containing linke... 247 1.2e-34 2
UNIPROTKB|F1MAH8 - symbol:Clip1 "Protein Clip1" species:1... 247 1.2e-34 2
MGI|MGI:1928401 - symbol:Clip1 "CAP-GLY domain containing... 247 1.8e-34 2
UNIPROTKB|F1RJL6 - symbol:CLIP2 "Uncharacterized protein"... 228 1.9e-34 2
UNIPROTKB|E1BGH3 - symbol:CLIP2 "Uncharacterized protein"... 233 2.9e-34 2
UNIPROTKB|Q9UDT6 - symbol:CLIP2 "CAP-Gly domain-containin... 229 3.7e-34 2
UNIPROTKB|J9P0I9 - symbol:CLIP2 "Uncharacterized protein"... 233 6.1e-34 2
UNIPROTKB|O42184 - symbol:CLIP1 "CAP-Gly domain-containin... 240 8.4e-34 2
MGI|MGI:1313136 - symbol:Clip2 "CAP-GLY domain containing... 233 9.8e-34 2
RGD|62019 - symbol:Clip2 "CAP-GLY domain containing linke... 233 1.3e-33 2
UNIPROTKB|E3W9A2 - symbol:CLIP1 "Uncharacterized protein"... 237 1.7e-33 2
MGI|MGI:1923936 - symbol:Clip3 "CAP-GLY domain containing... 312 2.4e-27 1
RGD|1306245 - symbol:Clip3 "CAP-GLY domain containing lin... 312 2.4e-27 1
MGI|MGI:1919100 - symbol:Clip4 "CAP-GLY domain containing... 198 4.6e-27 2
UNIPROTKB|E1BAL0 - symbol:CLIP3 "Uncharacterized protein"... 309 5.1e-27 1
UNIPROTKB|Q96DZ5 - symbol:CLIP3 "CAP-Gly domain-containin... 307 8.4e-27 1
UNIPROTKB|D2HFU1 - symbol:PANDA_009788 "Putative uncharac... 305 9.5e-27 1
UNIPROTKB|I3LGS7 - symbol:CLIP3 "Uncharacterized protein"... 286 2.5e-26 2
UNIPROTKB|Q5R686 - symbol:CLIP3 "CAP-Gly domain-containin... 299 6.5e-26 1
UNIPROTKB|F5H270 - symbol:CLIP1 "CAP-Gly domain-containin... 203 2.3e-16 1
UNIPROTKB|F1REW5 - symbol:CLIP1 "Uncharacterized protein"... 204 4.9e-15 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 164 3.1e-12 1
WB|WBGene00001017 - symbol:dnc-1 species:6239 "Caenorhabd... 176 5.5e-12 1
UNIPROTKB|H0Y7F7 - symbol:CEP350 "Centrosome-associated p... 175 6.7e-12 1
FB|FBgn0019968 - symbol:Khc-73 "Kinesin-73" species:7227 ... 176 8.3e-12 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 160 9.2e-12 2
UNIPROTKB|F1MIC9 - symbol:DCTN1 "Uncharacterized protein"... 157 1.5e-11 2
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 157 1.7e-11 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 157 1.7e-11 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 157 1.7e-11 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 157 1.7e-11 1
UNIPROTKB|Q5VT06 - symbol:CEP350 "Centrosome-associated p... 175 1.8e-11 1
UNIPROTKB|E1BC48 - symbol:CEP350 "Uncharacterized protein... 174 2.3e-11 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 155 3.1e-11 2
UNIPROTKB|D4A8U7 - symbol:Dctn1 "Dynactin subunit 1" spec... 157 4.0e-11 2
UNIPROTKB|Q14203 - symbol:DCTN1 "Dynactin subunit 1" spec... 157 4.3e-11 2
RGD|62038 - symbol:Dctn1 "dynactin 1" species:10116 "Ratt... 157 4.3e-11 2
MGI|MGI:107745 - symbol:Dctn1 "dynactin 1" species:10090 ... 157 4.3e-11 2
UNIPROTKB|F1SNT8 - symbol:DCTN1 "Uncharacterized protein"... 157 4.3e-11 2
FB|FBgn0036882 - symbol:CG9279 species:7227 "Drosophila m... 153 4.8e-11 2
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 151 8.6e-11 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 151 8.6e-11 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 149 1.5e-10 1
DICTYBASE|DDB_G0280435 - symbol:dynA "dynactin 150 kDa su... 162 2.0e-10 1
ZFIN|ZDB-GENE-070521-1 - symbol:kif13ba "kinesin family m... 162 2.3e-10 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 147 2.6e-10 1
UNIPROTKB|F1RJP9 - symbol:KIF13B "Uncharacterized protein... 161 3.1e-10 1
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 148 3.2e-10 1
UNIPROTKB|E1BGB0 - symbol:KIF13B "Uncharacterized protein... 161 3.2e-10 1
UNIPROTKB|G4NH27 - symbol:MGG_03960 "Dynactin ro-3" speci... 150 3.5e-10 2
UNIPROTKB|F1LRB4 - symbol:Kif13b "Protein Kif13b" species... 160 3.8e-10 1
RGD|1303307 - symbol:Kif13b "kinesin family member 13B" s... 160 3.8e-10 1
UNIPROTKB|D4A996 - symbol:Kif13b "Protein Kif13b" species... 160 4.0e-10 1
ASPGD|ASPL0000000137 - symbol:nudM species:162425 "Emeric... 158 4.2e-10 1
UNIPROTKB|F1PIS8 - symbol:KIF13B "Uncharacterized protein... 159 4.9e-10 1
UNIPROTKB|F1PIS5 - symbol:KIF13B "Uncharacterized protein... 159 5.5e-10 1
UNIPROTKB|E2RBT3 - symbol:CEP350 "Uncharacterized protein... 160 7.1e-10 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 137 3.9e-09 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 134 4.7e-09 1
FB|FBgn0001108 - symbol:Gl "Glued" species:7227 "Drosophi... 148 4.9e-09 1
UNIPROTKB|F8VPJ2 - symbol:KIF13B "Kinesin-like protein KI... 149 5.8e-09 1
UNIPROTKB|Q9NQT8 - symbol:KIF13B "Kinesin-like protein KI... 149 5.8e-09 1
SGD|S000006095 - symbol:NIP100 "Large subunit of the dyna... 137 4.6e-08 1
CGD|CAL0005838 - symbol:NIP100 species:5476 "Candida albi... 132 1.6e-07 1
UNIPROTKB|Q5A6R8 - symbol:NIP100 "Putative uncharacterize... 132 1.6e-07 1
POMBASE|SPAC27D7.13c - symbol:ssm4 "dynactin microtubule-... 129 2.3e-07 1
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 124 2.4e-07 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 122 8.9e-07 1
CGD|CAL0005089 - symbol:orf19.2828 species:5476 "Candida ... 117 1.3e-05 1
UNIPROTKB|F5H367 - symbol:CLIP1 "CAP-Gly domain-containin... 97 4.5e-05 1
FB|FBgn0034451 - symbol:TBCB "tubulin-binding cofactor B"... 107 0.00032 1
ASPGD|ASPL0000026322 - symbol:AN5116 species:162425 "Emer... 105 0.00060 1
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 446 (162.1 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 94/180 (52%), Positives = 112/180 (62%)
Query: 26 DSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQ 85
+SS VLT +T+ FIIG RV++GGT+ G+IAFIG+T FA G+WAGVVLD+P GKNDG V
Sbjct: 111 NSSAVLTANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSG 170
Query: 86 ARYFQCEPKHGIFSXXXXXXXXXXXXXXXXXXXXXXXX---XGFISPTGSARSLSFSTPG 142
RYFQCEPK GIFS +SPT S RS +PG
Sbjct: 171 KRYFQCEPKRGIFSRLTRLTTYPLAGAQTPTSPLAKSSPDRSRTVSPTASIRSSMLRSPG 230
Query: 143 PGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
G K G + +GDRVIV S GS+ G+LR+ G TQFA G WCGVELDEP GKNDG +
Sbjct: 231 IG----GKNG-MAVGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTV 285
Score = 197 (74.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 40 IGDRVYVG---GTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHG 96
+GDRV V G++ G + ++GET+FAPG+W GV LD+P GKNDG V RYF+C+PK+G
Sbjct: 239 VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYG 298
Query: 97 IF 98
+F
Sbjct: 299 VF 300
>UNIPROTKB|E1BQI8 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:AADN02026009
IPI:IPI00579643 Ensembl:ENSGALT00000001972 Uniprot:E1BQI8
Length = 1040
Score = 245 (91.3 bits), Expect = 7.3e-36, Sum P(2) = 7.3e-36
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 25 SDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVG 84
S +++V + F++G+RV+V G K G I ++GET+FAPG WAGVVLDDPVGKNDG VG
Sbjct: 57 SKAAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVG 116
Query: 85 QARYFQCEPKHGIFS 99
RYF+C+P GIF+
Sbjct: 117 GVRYFECQPLQGIFT 131
Score = 229 (85.7 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V + D +GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 196 NLSDSGSVKKGEKD-LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 254
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 255 VAGTRYFQCPPKFGLFA 271
Score = 183 (69.5 bits), Expect = 7.3e-36, Sum P(2) = 7.3e-36
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
D+RLGDRV+V G+KTGV+R+ G T FA+GEWCGVELDEP+GKNDG
Sbjct: 209 DLRLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDG 253
Score = 152 (58.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIV--MSAQGSKTGVLRFKGTTQFAQGE 185
SP + S S+ S A+ GD LGD V+ + G K GV+++ G TQFA G+
Sbjct: 39 SPLHKQSATSTSSADKSGSKAAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQ 98
Query: 186 WCGVELDEPIGKNDGNLG 203
W GV LD+P+GKNDG++G
Sbjct: 99 WAGVVLDDPVGKNDGSVG 116
>UNIPROTKB|E2QWB0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
CTD:6249 KO:K10421 OMA:MEMSHNQ EMBL:AAEX03014651
RefSeq:XP_003639950.1 Ensembl:ENSCAFT00000012632 GeneID:477461
KEGG:cfa:477461 Uniprot:E2QWB0
Length = 1438
Score = 251 (93.4 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 52/124 (41%), Positives = 66/124 (53%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFSXXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSARSLSFSTPGPGLS 146
RYFQCEP GIF+ + SA S+ S+PG +
Sbjct: 107 RYFQCEPLKGIFTRPSKLTRKVQVEDEANGLQTTPASRATSPLSTSAASMMTSSPGAPSN 166
Query: 147 TPAK 150
P K
Sbjct: 167 IPHK 170
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 23 SISDSSQV--LTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
SIS+ S+ + + IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKND
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKND 254
Query: 81 GQVGQARYFQCEPKHGIFS 99
G V RYFQC+PK+G+F+
Sbjct: 255 GAVAGTRYFQCQPKYGLFA 273
Score = 172 (65.6 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 211 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 255
Score = 147 (56.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>UNIPROTKB|E2QWD0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03014651 Ensembl:ENSCAFT00000012621 NextBio:20852935
Uniprot:E2QWD0
Length = 1438
Score = 251 (93.4 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 52/124 (41%), Positives = 66/124 (53%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFSXXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSARSLSFSTPGPGLS 146
RYFQCEP GIF+ + SA S+ S+PG +
Sbjct: 107 RYFQCEPLKGIFTRPSKLTRKVQVEDEANGLQTTPASRATSPLSTSAASMMTSSPGAPSN 166
Query: 147 TPAK 150
P K
Sbjct: 167 IPHK 170
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 23 SISDSSQV--LTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
SIS+ S+ + + IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKND
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKND 254
Query: 81 GQVGQARYFQCEPKHGIFS 99
G V RYFQC+PK+G+F+
Sbjct: 255 GAVAGTRYFQCQPKYGLFA 273
Score = 172 (65.6 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 211 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 255
Score = 147 (56.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>UNIPROTKB|P30622 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=TAS]
[GO:0000776 "kinetochore" evidence=TAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0046872 "metal ion binding" evidence=NAS]
[GO:0031116 "positive regulation of microtubule polymerization"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0001578
"microtubule bundle formation" evidence=IMP] [GO:0015631 "tubulin
binding" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IMP]
[GO:0044354 "macropinosome" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] [GO:0051010 "microtubule plus-end binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISS] [GO:0005768 "endosome"
evidence=TAS] [GO:0005882 "intermediate filament" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:M97501 Pfam:PF01302 GO:GO:0005829 GO:GO:0005813
Pathway_Interaction_DB:lis1pathway Reactome:REACT_115566
GO:GO:0042803 Reactome:REACT_21300 GO:GO:0000776 GO:GO:0046872
GO:GO:0005768 GO:GO:0006810 GO:GO:0008270 GO:GO:0005882
GO:GO:0003676 GO:GO:0030659 GO:GO:0001726 GO:GO:0001578
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0051010 GO:GO:0031116 GO:GO:0000236 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:X64838 EMBL:BC114213 EMBL:BC117209 EMBL:BC126305
IPI:IPI00013455 IPI:IPI00027172 IPI:IPI00217113 PIR:A43336
PIR:S22695 RefSeq:NP_001234926.1 RefSeq:NP_002947.1
RefSeq:NP_937883.1 UniGene:Hs.524809 PDB:2CP5 PDB:2CP6 PDB:2E3H
PDB:2E3I PDB:2E4H PDB:2HQH PDB:2QK0 PDB:3E2U PDB:3RDV PDBsum:2CP5
PDBsum:2CP6 PDBsum:2E3H PDBsum:2E3I PDBsum:2E4H PDBsum:2HQH
PDBsum:2QK0 PDBsum:3E2U PDBsum:3RDV ProteinModelPortal:P30622
SMR:P30622 DIP:DIP-42826N IntAct:P30622 MINT:MINT-1781312
STRING:P30622 PhosphoSite:P30622 DMDM:261260059 PaxDb:P30622
PRIDE:P30622 Ensembl:ENST00000302528 Ensembl:ENST00000358808
Ensembl:ENST00000537178 Ensembl:ENST00000540338 GeneID:6249
KEGG:hsa:6249 UCSC:uc001ucg.2 UCSC:uc001uch.1 UCSC:uc001uci.1
GeneCards:GC12M122755 HGNC:HGNC:10461 HPA:CAB004399 HPA:HPA026678
MIM:179838 neXtProt:NX_P30622 PharmGKB:PA162382349 OMA:MEMSHNQ
ChiTaRS:CLIP1 EvolutionaryTrace:P30622 GenomeRNAi:6249
NextBio:24265 ArrayExpress:P30622 Bgee:P30622 CleanEx:HS_CLIP1
Genevestigator:P30622 GermOnline:ENSG00000130779 Uniprot:P30622
Length = 1438
Score = 249 (92.7 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 45/77 (58%), Positives = 56/77 (72%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
S + SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG
Sbjct: 43 SSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGS 102
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQCEP GIF+
Sbjct: 103 VAGVRYFQCEPLKGIFT 119
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 23 SISDSSQV--LTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
SIS+ S+ + + IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKND
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKND 254
Query: 81 GQVGQARYFQCEPKHGIFS 99
G V RYFQC+PK+G+F+
Sbjct: 255 GAVAGTRYFQCQPKYGLFA 273
Score = 172 (65.6 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 211 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 255
Score = 147 (56.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 247 (92.0 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFS 99
RYFQCEP GIF+
Sbjct: 107 RYFQCEPLKGIFT 119
Score = 228 (85.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKNDG V RYFQC+PK+G+F+
Sbjct: 213 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 272
Score = 172 (65.6 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 210 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 254
Score = 149 (57.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKG-------GDIRLGDRVIVMSAQGSKTGVLRFKGTTQ 180
+P +A L + P S P D R+G+RV V G+K G ++F G TQ
Sbjct: 25 TPAAAAAPLEKTVPSEKASGPPSSETQEEFVDDFRVGERVWV---NGNKPGFIQFLGETQ 81
Query: 181 FAQGEWCGVELDEPIGKNDGNL 202
FA G+W G+ LDEPIGKNDG++
Sbjct: 82 FAPGQWAGIVLDEPIGKNDGSV 103
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 247 (92.0 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFS 99
RYFQCEP GIF+
Sbjct: 107 RYFQCEPLKGIFT 119
Score = 228 (85.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKNDG V RYFQC+PK+G+F+
Sbjct: 213 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 272
Score = 172 (65.6 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 210 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 254
Score = 149 (57.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKG-------GDIRLGDRVIVMSAQGSKTGVLRFKGTTQ 180
+P +A L + P S P D R+G+RV V G+K G ++F G TQ
Sbjct: 25 TPAAAAAPLEKTVPSEKASGPPSSETQEEFVDDFRVGERVWV---NGNKPGFIQFLGETQ 81
Query: 181 FAQGEWCGVELDEPIGKNDGNL 202
FA G+W G+ LDEPIGKNDG++
Sbjct: 82 FAPGQWAGIVLDEPIGKNDGSV 103
>MGI|MGI:1928401 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10090 "Mus musculus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO;IDA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0035371 "microtubule plus end" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1928401 Pfam:PF01302 GO:GO:0005813
GO:GO:0046872 GO:GO:0006810 GO:GO:0008270 GO:GO:0003676
GO:GO:0030659 GO:GO:0001726 GO:GO:0044354 GO:GO:0008017
GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0035371 GO:GO:0031116 GeneTree:ENSGT00700000104055 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:AK220172 EMBL:BC007191 IPI:IPI00123063 IPI:IPI00761270
RefSeq:NP_062739.2 UniGene:Mm.241109 UniGene:Mm.441802 PDB:2CP7
PDBsum:2CP7 ProteinModelPortal:Q922J3 SMR:Q922J3 IntAct:Q922J3
STRING:Q922J3 PhosphoSite:Q922J3 PaxDb:Q922J3 PRIDE:Q922J3
Ensembl:ENSMUST00000111564 Ensembl:ENSMUST00000111566 GeneID:56430
KEGG:mmu:56430 UCSC:uc008zoa.1 UCSC:uc008zob.1
EvolutionaryTrace:Q922J3 NextBio:312602 Bgee:Q922J3
CleanEx:MM_CLIP1 Genevestigator:Q922J3
GermOnline:ENSMUSG00000049550 Uniprot:Q922J3
Length = 1391
Score = 247 (92.0 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFS 99
RYFQCEP GIF+
Sbjct: 107 RYFQCEPLKGIFT 119
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV VGGTK+G + F+GET FA G+W GV LD+P+GKNDG V RYFQC+PK+G+F+
Sbjct: 213 VGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 272
Score = 171 (65.3 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 210 ELKVGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 254
Score = 147 (56.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>UNIPROTKB|F1RJL6 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:CU914415
EMBL:FP340223 Ensembl:ENSSSCT00000008462 Uniprot:F1RJL6
Length = 827
Score = 228 (85.3 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
+++V E F++G+RV+V G K G + ++GET+FAPG WAGVVLD+PVGKNDG VG
Sbjct: 68 AAEVGDEFLGDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGV 127
Query: 87 RYFQCEPKHGIFS 99
RYF+C GIF+
Sbjct: 128 RYFECPALQGIFT 140
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V D D +GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 205 NLSDSGSVKRGDKD-LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 263
Query: 83 VGQARY 88
V RY
Sbjct: 264 VAGTRY 269
Score = 184 (69.8 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGV 189
TG+ + S G S D+RLGDRV+V G+KTGV+R+ G T FA+GEWCGV
Sbjct: 198 TGNESGSNLSDSG---SVKRGDKDLRLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGV 251
Query: 190 ELDEPIGKNDG 200
ELDEP+GKNDG
Sbjct: 252 ELDEPLGKNDG 262
Score = 146 (56.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 152 GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
GD +G+RV V G K GV+++ G TQFA G+W GV LDEP+GKNDG +G
Sbjct: 77 GDFVVGERVWV---NGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVG 125
>UNIPROTKB|E1BGH3 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:DAAA02058193
IPI:IPI00716251 Ensembl:ENSBTAT00000015759 Uniprot:E1BGH3
Length = 1047
Score = 233 (87.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V D D +GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 204 NLSDSGSVKRGDKD-LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 262
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 263 VAGTRYFQCPPKFGLFA 279
Score = 229 (85.7 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
+++V E F++G+RV+V G K G + ++GET+FAPG WAGVVLD+PVGKNDG VG
Sbjct: 67 AAEVGDEFAGDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGV 126
Query: 87 RYFQCEPKHGIFS 99
RYF+C GIF+
Sbjct: 127 RYFECPALQGIFT 139
Score = 184 (69.8 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGV 189
TG+ + S G S D+RLGDRV+V G+KTGV+R+ G T FA+GEWCGV
Sbjct: 197 TGNESGSNLSDSG---SVKRGDKDLRLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGV 250
Query: 190 ELDEPIGKNDG 200
ELDEP+GKNDG
Sbjct: 251 ELDEPLGKNDG 261
Score = 146 (56.5 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 152 GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
GD +G+RV V G K GV+++ G TQFA G+W GV LDEP+GKNDG +G
Sbjct: 76 GDFVVGERVWV---NGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVG 124
>UNIPROTKB|Q9UDT6 [details] [associations]
symbol:CLIP2 "CAP-Gly domain-containing linker protein 2"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=TAS] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881 Orphanet:904
HOGENOM:HOG000092755 HOVERGEN:HBG007123 EMBL:AB006629 EMBL:AC005015
EMBL:AF041059 EMBL:AF041055 EMBL:AF041056 EMBL:AF041057
EMBL:AF041058 IPI:IPI00019642 IPI:IPI00246616 RefSeq:NP_003379.3
RefSeq:NP_115797.1 UniGene:Hs.647018 PDB:2CP2 PDB:2CP3 PDBsum:2CP2
PDBsum:2CP3 ProteinModelPortal:Q9UDT6 SMR:Q9UDT6 IntAct:Q9UDT6
STRING:Q9UDT6 PhosphoSite:Q9UDT6 DMDM:74753268 PaxDb:Q9UDT6
PRIDE:Q9UDT6 DNASU:7461 Ensembl:ENST00000223398
Ensembl:ENST00000361545 Ensembl:ENST00000395060
Ensembl:ENST00000573159 Ensembl:ENST00000575290
Ensembl:ENST00000575893 GeneID:7461 KEGG:hsa:7461 UCSC:uc003uam.3
CTD:7461 GeneCards:GC07P073703 HGNC:HGNC:2586 HPA:CAB020767
HPA:HPA020430 MIM:603432 neXtProt:NX_Q9UDT6 PharmGKB:PA27085
KO:K10422 OMA:HWRAQLE PhylomeDB:Q9UDT6 ChiTaRS:CLIP2
EvolutionaryTrace:Q9UDT6 GenomeRNAi:7461 NextBio:29216
ArrayExpress:Q9UDT6 Bgee:Q9UDT6 CleanEx:HS_CLIP2
Genevestigator:Q9UDT6 GermOnline:ENSG00000106665 Uniprot:Q9UDT6
Length = 1046
Score = 229 (85.7 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 38 FIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
F++G+RV+V G K G + ++GET+FAPG WAGVVLDDPVGKNDG VG RYF+C GI
Sbjct: 79 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 138
Query: 98 FS 99
F+
Sbjct: 139 FT 140
Score = 229 (85.7 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V + D +GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 205 NLSDSGSVKRGEKD-LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 263
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 264 VAGTRYFQCPPKFGLFA 280
Score = 183 (69.5 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
D+RLGDRV+V G+KTGV+R+ G T FA+GEWCGVELDEP+GKNDG
Sbjct: 218 DLRLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDG 262
Score = 147 (56.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 129 PTGS-ARSLSFSTPGPGLSTPAKG--GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGE 185
P+ S A + + PGP + GD +G+RV V G K GV+++ G TQFA G+
Sbjct: 51 PSSSPAAAAAPEKPGPKAAEVGDDFLGDFVVGERVWV---NGVKPGVVQYLGETQFAPGQ 107
Query: 186 WCGVELDEPIGKNDGNLG 203
W GV LD+P+GKNDG +G
Sbjct: 108 WAGVVLDDPVGKNDGAVG 125
>UNIPROTKB|J9P0I9 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000938
InterPro:IPR004827 SMART:SM00338 Pfam:PF01302 GO:GO:0043565
GO:GO:0003700 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03004228 EMBL:AAEX03004229 EMBL:AAEX03004230
Ensembl:ENSCAFT00000048444 Uniprot:J9P0I9
Length = 702
Score = 233 (87.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V D D +GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 208 NLSDSGSVKRGDKD-LRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 266
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 267 VAGTRYFQCPPKFGLFA 283
Score = 221 (82.9 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 38 FIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
F +G+RV+V G K G + ++GET+FAPG WAGVVLD+PVGKNDG VG RYF+C GI
Sbjct: 82 FAVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECPALQGI 141
Query: 98 FS 99
F+
Sbjct: 142 FT 143
Score = 184 (69.8 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGV 189
TG+ + S G S D+RLGDRV+V G+KTGV+R+ G T FA+GEWCGV
Sbjct: 201 TGNESGSNLSDSG---SVKRGDKDLRLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGV 254
Query: 190 ELDEPIGKNDG 200
ELDEP+GKNDG
Sbjct: 255 ELDEPLGKNDG 265
Score = 164 (62.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 125 GFISPTGSARSLSFSTPGPGLSTPAKG--GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFA 182
G ++P +A + + PGP GD +G+RV V G K GV+++ G TQFA
Sbjct: 51 GPVAPAAAAAATTTEKPGPKAGEVGDDFLGDFAVGERVWV---NGVKPGVVQYLGETQFA 107
Query: 183 QGEWCGVELDEPIGKNDGNLG 203
G+W GV LDEP+GKNDG +G
Sbjct: 108 PGQWAGVVLDEPVGKNDGAVG 128
Score = 35 (17.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 64 PGDWAGVVLDDPVGKNDGQVGQ 85
PG AG V DD +G D VG+
Sbjct: 67 PGPKAGEVGDDFLG--DFAVGE 86
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 240 (89.5 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 46/82 (56%), Positives = 55/82 (67%)
Query: 23 SISDSSQVLTEDT-----DSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVG 77
S SS T D D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+G
Sbjct: 39 SSEKSSSTTTADAHDDFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIG 98
Query: 78 KNDGQVGQARYFQCEPKHGIFS 99
KNDG V RYFQCEP GIF+
Sbjct: 99 KNDGSVAGVRYFQCEPLRGIFT 120
Score = 227 (85.0 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 23 SISDSSQV--LTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
S+S+ S+ L + IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKND
Sbjct: 198 SVSNLSEAGSLKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKND 257
Query: 81 GQVGQARYFQCEPKHGIFS 99
G V RYFQC+P++G+F+
Sbjct: 258 GAVAGTRYFQCQPRYGLFA 276
Score = 172 (65.6 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 214 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 258
Score = 147 (56.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 58 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 104
>MGI|MGI:1313136 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0051010 "microtubule plus-end binding" evidence=ISO]
InterPro:IPR000938 MGI:MGI:1313136 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 HOGENOM:HOG000092755
HOVERGEN:HBG007123 CTD:7461 KO:K10422 OMA:HWRAQLE EMBL:AJ228863
EMBL:AJ228865 EMBL:AJ228868 EMBL:AJ228869 EMBL:AJ228870
EMBL:AJ228872 EMBL:AJ228876 EMBL:AJ228880 EMBL:AJ228867
EMBL:AJ228875 EMBL:AJ228871 EMBL:AJ228873 EMBL:AJ228877
EMBL:AJ228866 EMBL:AJ228879 EMBL:AJ228878 EMBL:AJ228874
EMBL:AF289667 EMBL:AF289664 EMBL:BC039162 EMBL:BC053048
IPI:IPI00408543 IPI:IPI00467854 PIR:T42720 RefSeq:NP_001034251.1
RefSeq:NP_034120.2 UniGene:Mm.255138 ProteinModelPortal:Q9Z0H8
SMR:Q9Z0H8 IntAct:Q9Z0H8 STRING:Q9Z0H8 PhosphoSite:Q9Z0H8
PaxDb:Q9Z0H8 PRIDE:Q9Z0H8 Ensembl:ENSMUST00000036999
Ensembl:ENSMUST00000100647 GeneID:269713 KEGG:mmu:269713
UCSC:uc008zwi.1 UCSC:uc008zwj.1 InParanoid:Q9Z0H8 OrthoDB:EOG4X3H0M
NextBio:393005 Bgee:Q9Z0H8 CleanEx:MM_CLIP2 Genevestigator:Q9Z0H8
GermOnline:ENSMUSG00000063146 Uniprot:Q9Z0H8
Length = 1047
Score = 233 (87.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V D D + GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 206 NLSDSGSVKRGDKDLHL-GDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 264
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 265 VAGTRYFQCPPKFGLFA 281
Score = 229 (85.7 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 38 FIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
F++G+RV+V G K G + ++GET+FAPG WAGVVLDDPVGKNDG VG RYF+C GI
Sbjct: 80 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 139
Query: 98 FS 99
F+
Sbjct: 140 FT 141
Score = 179 (68.1 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGV 189
TG+ + S G S D+ LGDRV+V G+KTGV+R+ G T FA+GEWCGV
Sbjct: 199 TGNESGSNLSDSG---SVKRGDKDLHLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGV 252
Query: 190 ELDEPIGKNDG 200
ELDEP+GKNDG
Sbjct: 253 ELDEPLGKNDG 263
Score = 155 (59.6 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKG--GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGE 185
S +G+A ++S PGP + GD +G+RV V G K GV+++ G TQFA G+
Sbjct: 53 SSSGAATTVS-EKPGPKAAEVGDDFLGDFVVGERVWV---NGVKPGVVQYLGETQFAPGQ 108
Query: 186 WCGVELDEPIGKNDGNLG 203
W GV LD+P+GKNDG +G
Sbjct: 109 WAGVVLDDPVGKNDGAVG 126
>RGD|62019 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA;ISO;IDA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0008017 "microtubule
binding" evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=TAS]
[GO:0042599 "lamellar body" evidence=TAS] [GO:0051010 "microtubule
plus-end binding" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
RGD:62019 GO:GO:0005875 GO:GO:0030425 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 GO:GO:0007026
GO:GO:0042599 HOGENOM:HOG000092755 HOVERGEN:HBG007123 CTD:7461
KO:K10422 OrthoDB:EOG4X3H0M EMBL:AJ000485 IPI:IPI00195929 PIR:T42734
RefSeq:NP_068837.1 UniGene:Rn.10893 ProteinModelPortal:O55156
SMR:O55156 IntAct:O55156 STRING:O55156 PhosphoSite:O55156
PRIDE:O55156 GeneID:29264 KEGG:rno:29264 UCSC:RGD:62019
InParanoid:O55156 NextBio:608596 ArrayExpress:O55156
Genevestigator:O55156 Uniprot:O55156
Length = 1046
Score = 233 (87.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
++SDS V D D + GDRV VGGTK+G + ++GET FA G+W GV LD+P+GKNDG
Sbjct: 206 NLSDSGSVKRGDKDLHL-GDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGA 264
Query: 83 VGQARYFQCEPKHGIFS 99
V RYFQC PK G+F+
Sbjct: 265 VAGTRYFQCPPKFGLFA 281
Score = 228 (85.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 38 FIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
F++G+RV+V G K G + ++GET+FAPG WAGVVLDDPVGKNDG VG RYF+C GI
Sbjct: 80 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGLRYFECPALQGI 139
Query: 98 FS 99
F+
Sbjct: 140 FT 141
Score = 179 (68.1 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGV 189
TG+ + S G S D+ LGDRV+V G+KTGV+R+ G T FA+GEWCGV
Sbjct: 199 TGNESGSNLSDSG---SVKRGDKDLHLGDRVLV---GGTKTGVVRYVGETDFAKGEWCGV 252
Query: 190 ELDEPIGKNDG 200
ELDEP+GKNDG
Sbjct: 253 ELDEPLGKNDG 263
Score = 150 (57.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKG--GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGE 185
S G+ ++S PGP + GD +G+RV V G K GV+++ G TQFA G+
Sbjct: 53 SSAGATTTVS-EKPGPKAAEVGDDFLGDFVVGERVWV---NGVKPGVVQYLGETQFAPGQ 108
Query: 186 WCGVELDEPIGKNDGNLG 203
W GV LD+P+GKNDG +G
Sbjct: 109 WAGVVLDDPVGKNDGAVG 126
>UNIPROTKB|E3W9A2 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 EMBL:DAAA02045251
EMBL:DAAA02045252 IPI:IPI00973697 RefSeq:NP_001179752.1
UniGene:Bt.56241 PRIDE:E3W9A2 Ensembl:ENSBTAT00000022319
GeneID:534624 KEGG:bta:534624 OMA:DSKQTNE NextBio:20876476
Uniprot:E3W9A2
Length = 1427
Score = 237 (88.5 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 43/73 (58%), Positives = 53/73 (72%)
Query: 27 SSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQA 86
SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG V
Sbjct: 47 SSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGV 106
Query: 87 RYFQCEPKHGIFS 99
RYFQCE GIF+
Sbjct: 107 RYFQCELLKGIFT 119
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 23 SISDSSQV--LTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
SIS+ S+ + + IGDRV VGGTK+G + F+GET FA G+W GV LD+P+GKND
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKND 254
Query: 81 GQVGQARYFQCEPKHGIFS 99
G V RYFQC+PK+G+F+
Sbjct: 255 GAVAGTRYFQCQPKYGLFA 273
Score = 172 (65.6 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
++++GDRV+V G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 211 ELKIGDRVLV---GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 255
Score = 147 (56.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>MGI|MGI:1923936 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0010828 "positive regulation of glucose transport"
evidence=IMP] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISO] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISO] [GO:0031901 "early endosome membrane"
evidence=ISO] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO] [GO:0035594 "ganglioside binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0044091 "membrane biogenesis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045807 "positive
regulation of endocytosis" evidence=ISO] [GO:0055038 "recycling
endosome membrane" evidence=ISO] [GO:0072321 "chaperone-mediated
protein transport" evidence=ISO] [GO:0090004 "positive regulation
of establishment of protein localization to plasma membrane"
evidence=IDA] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1923936 Pfam:PF01302 GO:GO:0005886
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
EMBL:CH466593 GeneTree:ENSGT00700000104055 CTD:25999
HOGENOM:HOG000007206 HOVERGEN:HBG057079 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 EMBL:AC149067 EMBL:BC056173 EMBL:BC138413
EMBL:AK005167 IPI:IPI00265407 RefSeq:NP_001074583.1
UniGene:Mm.159258 PDB:1WHH PDBsum:1WHH ProteinModelPortal:B9EHT4
SMR:B9EHT4 PRIDE:B9EHT4 Ensembl:ENSMUST00000014065 GeneID:76686
KEGG:mmu:76686 UCSC:uc009gea.1 ChiTaRS:CLIP3
EvolutionaryTrace:Q9DB67 NextBio:345627 Bgee:B9EHT4
Genevestigator:B9EHT4 Uniprot:B9EHT4
Length = 547
Score = 312 (114.9 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 67/169 (39%), Positives = 87/169 (51%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R S S+P G +G
Sbjct: 356 SVSKVSKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKSPSSPSLGSLQQREGAK 415
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 416 AEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSV 461
Score = 188 (71.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C P+HG+F+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFA 477
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 282 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 335
Query: 199 DGNLG 203
DG++G
Sbjct: 336 DGSVG 340
Score = 36 (17.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 125 GFISPTGSARSLSFSTPGPGLSTPAK 150
G +P + + ST PG S AK
Sbjct: 474 GVFAPASRIQRIGGSTDPPGDSVGAK 499
>RGD|1306245 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10116 "Rattus norvegicus" [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISO;ISS] [GO:0005802
"trans-Golgi network" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0010828 "positive regulation of glucose
transport" evidence=ISO;ISS] [GO:0018230 "peptidyl-L-cysteine
S-palmitoylation" evidence=ISO;ISS] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=ISO;ISS]
[GO:0031901 "early endosome membrane" evidence=ISO;ISS] [GO:0032588
"trans-Golgi network membrane" evidence=ISO;ISS] [GO:0035594
"ganglioside binding" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0044091
"membrane biogenesis" evidence=ISO;ISS] [GO:0045121 "membrane raft"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISO;ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000938
PROSITE:PS50088 SMART:SM00248 Pfam:PF01302 RGD:1306245
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038 EMBL:CH473979
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 IPI:IPI00367085 RefSeq:NP_001100971.1
RefSeq:XP_003748868.1 UniGene:Rn.136605 SMR:D4A507
Ensembl:ENSRNOT00000028247 GeneID:100911911 GeneID:308493
KEGG:rno:100911911 KEGG:rno:308493 UCSC:RGD:1306245 NextBio:659004
Uniprot:D4A507
Length = 547
Score = 312 (114.9 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 67/169 (39%), Positives = 87/169 (51%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R S S+P G +G
Sbjct: 356 SVSKVSKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKSPSSPSLGSLQQREGAK 415
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 416 AEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSV 461
Score = 188 (71.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C P+HG+F+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFA 477
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 282 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 335
Query: 199 DGNLG 203
DG++G
Sbjct: 336 DGSVG 340
Score = 36 (17.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 125 GFISPTGSARSLSFSTPGPGLSTPAK 150
G +P + + ST PG S AK
Sbjct: 474 GVFAPASRIQRIGGSTDPPGDSVGAK 499
>MGI|MGI:1919100 [details] [associations]
symbol:Clip4 "CAP-GLY domain containing linker protein
family, member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1919100 Pfam:PF01302 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 HOGENOM:HOG000007206
HOVERGEN:HBG057079 KO:K10423 EMBL:AK018895 EMBL:AK075758
EMBL:BC011280 EMBL:BC035226 IPI:IPI00284864 IPI:IPI00378257
IPI:IPI00553520 RefSeq:NP_084455.2 RefSeq:NP_780587.1
UniGene:Mm.196382 PDB:1WHJ PDB:1WHK PDBsum:1WHJ PDBsum:1WHK
ProteinModelPortal:Q8CI96 SMR:Q8CI96 STRING:Q8CI96
PhosphoSite:Q8CI96 PRIDE:Q8CI96 Ensembl:ENSMUST00000024854
GeneID:78785 KEGG:mmu:78785 UCSC:uc008dmw.2 UCSC:uc008dmz.1
UCSC:uc012awx.1 CTD:79745 InParanoid:Q8CI96 OMA:FATQLID
OrthoDB:EOG4V6ZGH EvolutionaryTrace:Q8CI96 NextBio:349496
Bgee:Q8CI96 Genevestigator:Q8CI96 GermOnline:ENSMUSG00000024059
Uniprot:Q8CI96
Length = 704
Score = 198 (74.8 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K G + F G T+FA G WAG+ LD+P GKN+G VG+ +YF+C PK+GIF+
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKYGIFA 344
Score = 181 (68.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+G+RV V G + G I F G T FAPG W G+ L+ P GKNDG VG +YF C P++GIF+
Sbjct: 486 LGERVLVVGQRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFA 545
Score = 162 (62.1 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
++LGDRV++ G K G LRF GTT+FA G+W G+ELDEP GKN+G++G
Sbjct: 283 LKLGDRVVIA---GQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVG 329
Score = 142 (55.0 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 152 GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
G + LG+RV+V+ G + G ++F GTT FA G W G+EL++P GKNDG++G
Sbjct: 482 GALHLGERVLVV---GQRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVG 530
Score = 126 (49.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 41 GDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
G +V + + + ++G T FA G W G+ L GKNDG VG RYF C+P +G+
Sbjct: 625 GSQVLLTSSNEMATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGV 682
Score = 105 (42.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 134 RSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDE 193
RS S ST GL K + G +V++ S+ T +R+ G T FA G W G+EL
Sbjct: 605 RSWSSSTTAGGLEGTVK---LHEGSQVLLTSSNEMAT--VRYVGPTDFASGIWLGLELRS 659
Query: 194 PIGKNDGNLG 203
GKNDG +G
Sbjct: 660 AKGKNDGAVG 669
>UNIPROTKB|E1BAL0 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0045121 "membrane raft" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0090004 "positive regulation of establishment of protein
localization to plasma membrane" evidence=ISS] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0072321
"chaperone-mediated protein transport" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=ISS] [GO:0044091 "membrane
biogenesis" evidence=ISS] [GO:0031115 "negative regulation of
microtubule polymerization" evidence=ISS] InterPro:IPR002110
InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248 Pfam:PF01302
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:DAAA02046954 IPI:IPI00686311 RefSeq:NP_001192827.1
UniGene:Bt.56647 PRIDE:E1BAL0 Ensembl:ENSBTAT00000026221
GeneID:522965 KEGG:bta:522965 NextBio:20873637 Uniprot:E1BAL0
Length = 547
Score = 309 (113.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 66/169 (39%), Positives = 86/169 (50%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R S+P G +G
Sbjct: 356 SVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKPSSSPSLGSLQQREGAK 415
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 416 AEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSV 461
Score = 191 (72.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C PKHG+F+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPKHGVFA 477
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 282 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 335
Query: 199 DGNLG 203
DG++G
Sbjct: 336 DGSVG 340
>UNIPROTKB|Q96DZ5 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9606 "Homo sapiens" [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IMP;IDA]
[GO:0005886 "plasma membrane" evidence=IDA;IMP] [GO:0008017
"microtubule binding" evidence=IMP;IDA] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=IMP] [GO:0035594
"ganglioside binding" evidence=IDA] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0055038 "recycling endosome
membrane" evidence=IDA] [GO:0044091 "membrane biogenesis"
evidence=IMP] [GO:0045121 "membrane raft" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=IMP] [GO:0072321 "chaperone-mediated protein transport"
evidence=IMP] [GO:0005802 "trans-Golgi network" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
Pfam:PF01302 GO:GO:0005886 GO:GO:0031901 GO:GO:0032588
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 EMBL:AJ427922 EMBL:AK094738
EMBL:AK289509 EMBL:BC013116 EMBL:BC014486 EMBL:AL117468
IPI:IPI00103362 PIR:T17253 RefSeq:NP_001186499.1 RefSeq:NP_056341.1
UniGene:Hs.466539 PDB:2CP0 PDBsum:2CP0 ProteinModelPortal:Q96DZ5
SMR:Q96DZ5 STRING:Q96DZ5 PhosphoSite:Q96DZ5 DMDM:116241302
PaxDb:Q96DZ5 PRIDE:Q96DZ5 Ensembl:ENST00000360535 GeneID:25999
KEGG:hsa:25999 UCSC:uc002ocz.2 CTD:25999 GeneCards:GC19M036505
H-InvDB:HIX0040341 HGNC:HGNC:24314 HPA:HPA041429 MIM:607382
neXtProt:NX_Q96DZ5 PharmGKB:PA162382439 HOGENOM:HOG000007206
HOVERGEN:HBG057079 InParanoid:Q96DZ5 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ PhylomeDB:Q96DZ5 EvolutionaryTrace:Q96DZ5
GenomeRNAi:25999 NextBio:47718 ArrayExpress:Q96DZ5 Bgee:Q96DZ5
CleanEx:HS_CLIP3 Genevestigator:Q96DZ5 GermOnline:ENSG00000105270
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
Uniprot:Q96DZ5
Length = 547
Score = 307 (113.1 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 66/169 (39%), Positives = 86/169 (50%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R + S+P G G
Sbjct: 356 SVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKTPSSPSLGSLQQRDGAK 415
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 416 AEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSV 461
Score = 188 (71.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C P+HG+F+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 477
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 282 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 335
Query: 199 DGNLG 203
DG++G
Sbjct: 336 DGSVG 340
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 125 GFISPTGSARSLSFSTPGPGLSTPAK 150
G +P + + ST PG S AK
Sbjct: 474 GVFAPASRIQRIGGSTDSPGDSVGAK 499
>UNIPROTKB|D2HFU1 [details] [associations]
symbol:PANDA_009788 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISS] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISS] [GO:0031901 "early endosome membrane"
evidence=ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISS] [GO:0035594 "ganglioside binding" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0044091 "membrane biogenesis" evidence=ISS]
[GO:0045121 "membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 HOGENOM:HOG000007206 GO:GO:0035594 GO:GO:0072321
GO:GO:0044091 GO:GO:0018230 EMBL:GL192794 Uniprot:D2HFU1
Length = 504
Score = 305 (112.4 bits), Expect = 9.5e-27, P = 9.5e-27
Identities = 66/169 (39%), Positives = 86/169 (50%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 295 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 354
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R S+P G +G
Sbjct: 355 SVSKISKVVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKPPSSPSLGSLQQREGAK 414
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 415 AEVGDQVLVA---GQKQGIVRFFGKTDFAPGYWYGIELDQPTGKHDGSV 460
Score = 189 (71.6 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C P+HG+F+
Sbjct: 417 VGDQVLVAGQKQGIVRFFGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 476
Score = 176 (67.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 281 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 334
Query: 199 DGNLG 203
DG++G
Sbjct: 335 DGSVG 339
>UNIPROTKB|I3LGS7 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090004 "positive regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0072321
"chaperone-mediated protein transport" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0044091 "membrane biogenesis" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035594 "ganglioside binding" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0031115
"negative regulation of microtubule polymerization" evidence=IEA]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=IEA]
[GO:0010828 "positive regulation of glucose transport"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000938 SMART:SM00248 Pfam:PF01302
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 GeneTree:ENSGT00700000104055 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CU694686 Ensembl:ENSSSCT00000022327 Uniprot:I3LGS7
Length = 551
Score = 286 (105.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 63/171 (36%), Positives = 84/171 (49%)
Query: 39 IIGDRVYVGGTKS-GRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
++GD+ K+ G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+
Sbjct: 298 VLGDKGLSQSQKTTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGL 357
Query: 98 FSXXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKG 151
F+ F TG R S+P G +G
Sbjct: 358 FASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKPTSSPSAGSLQQREG 417
Query: 152 GDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 418 AKAEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSI 465
Score = 190 (71.9 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG + RYF C PKHG+F+
Sbjct: 422 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSIFGVRYFTCPPKHGVFA 481
Score = 149 (57.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 143 PGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
PG+ + LGD+ + S + TG LRF GTT+FA G+W GVELDEP GKNDG++
Sbjct: 286 PGVPQAPCWTQLVLGDKGLSQSQK--TTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSV 343
Query: 203 G 203
G
Sbjct: 344 G 344
Score = 39 (18.8 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 14 NPFQNCFLVSISDSSQV--LTEDTDS 37
NP C VSI +S V LT+D S
Sbjct: 223 NPALRCKKVSIPSTSPVEPLTQDLRS 248
>UNIPROTKB|Q5R686 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9601 "Pongo abelii" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0044091 "membrane biogenesis" evidence=ISS] [GO:0045121
"membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0008017
GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 CTD:25999 HOVERGEN:HBG057079 KO:K10423
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CR860608 RefSeq:NP_001126592.1 UniGene:Pab.1232
ProteinModelPortal:Q5R686 SMR:Q5R686 GeneID:100173588
KEGG:pon:100173588 InParanoid:Q5R686 Uniprot:Q5R686
Length = 547
Score = 299 (110.3 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 65/169 (38%), Positives = 85/169 (50%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GDRV + G K+G + F G T+FA G W GV LD+P GKNDG VG RYF C PK G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR------SLSFSTPGPGLSTPAKGGD 153
F TG R + S+P G
Sbjct: 356 SVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKTPSSPSLGSLQQRDRAK 415
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+GD+V+V G K G++RF G T FA G W G+ELD+P GK+DG++
Sbjct: 416 AEVGDQVLVA---GQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSV 461
Score = 188 (71.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
+GD+V V G K G + F G+T FAPG W G+ LD P GK+DG V RYF C P+HG+F+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 477
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
+ PG L A G +RLGDRV++ G KTG LRF GTT+FA G+W GVELDEP GKN
Sbjct: 282 NVPG-NLMLSALG--LRLGDRVLL---DGQKTGTLRFCGTTEFASGQWVGVELDEPEGKN 335
Query: 199 DGNLG 203
DG++G
Sbjct: 336 DGSVG 340
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 125 GFISPTGSARSLSFSTPGPGLSTPAK 150
G +P + + ST PG S AK
Sbjct: 474 GVFAPASRIQRIGGSTDSPGDSVGAK 499
>UNIPROTKB|F5H270 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 GO:GO:0005881 HGNC:HGNC:10461 ChiTaRS:CLIP1
EMBL:AC048338 EMBL:AC127002 EMBL:AC079406 EMBL:AC093016
IPI:IPI01010481 ProteinModelPortal:F5H270 SMR:F5H270
Ensembl:ENST00000535290 ArrayExpress:F5H270 Bgee:F5H270
Uniprot:F5H270
Length = 108
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
S + SS+ E D F +G+RV+V G K G I F+GET+FAPG WAG+VLD+P+GKNDG
Sbjct: 43 SSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGS 102
Query: 83 VGQARY 88
V RY
Sbjct: 103 VAGVRY 108
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
D R+G+RV V G+K G ++F G TQFA G+W G+ LDEPIGKNDG++
Sbjct: 57 DFRVGERVWV---NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
>UNIPROTKB|F1REW5 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:FP565737 OMA:DSKQTNE
Ensembl:ENSSSCT00000010735 Uniprot:F1REW5
Length = 1204
Score = 204 (76.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 46 VGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
VGGTK+G + F+GET FA G+W GV LD+P+GKNDG V RYFQC+PK+G+F+
Sbjct: 1 VGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 54
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 167 GSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
G+K GV+RF G T FA+GEWCGVELDEP+GKNDG
Sbjct: 3 GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG 36
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 36 DSFIIGDR--VYVGG--TKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQC 91
++ +G+R V V G TK G + ++G F PG W GV D+P+GK+DG V RYF+C
Sbjct: 159 EAIAVGNRCKVQVPGQATKIGTVMYVGTADFKPGYWVGVKYDEPLGKHDGSVNGKRYFEC 218
Query: 92 EPKHGIF 98
EPK+G F
Sbjct: 219 EPKYGAF 225
Score = 109 (43.4 bits), Expect = 0.00014, P = 0.00014
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 154 IRLGDRVIV-MSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
I +G+R V + Q +K G + + GT F G W GV+ DEP+GK+DG++
Sbjct: 161 IAVGNRCKVQVPGQATKIGTVMYVGTADFKPGYWVGVKYDEPLGKHDGSV 210
>WB|WBGene00001017 [details] [associations]
symbol:dnc-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0035047 "centrosomal and pronuclear
rotation" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0000132 "establishment of mitotic spindle
orientation" evidence=IMP] [GO:0007097 "nuclear migration"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0051233 "spindle midzone"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0008092 "cytoskeletal protein binding"
evidence=ISS] [GO:0045505 "dynein intermediate chain binding"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0060069 "Wnt receptor signaling pathway, regulating spindle
positioning" evidence=IEP] [GO:0005869 "dynactin complex"
evidence=IDA] [GO:0035371 "microtubule plus end" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0009792
GO:GO:0000132 GO:GO:0002009 GO:GO:0035046 GO:GO:0005813
GO:GO:0007059 GO:GO:0000776 GO:GO:0007067 GO:GO:0051233
GO:GO:0016358 GO:GO:0005869 GO:GO:0030496 GO:GO:0008017
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245
GO:GO:0000235 GO:GO:0035371 GeneTree:ENSGT00700000104055 KO:K04648
InterPro:IPR022157 Pfam:PF12455 GO:GO:0035047 EMBL:Z69385
GO:GO:0060069 GO:GO:0045505 GeneID:177987 KEGG:cel:CELE_ZK593.5
CTD:177987 RefSeq:NP_001255521.1 ProteinModelPortal:E2JKZ0
SMR:E2JKZ0 IntAct:E2JKZ0 EnsemblMetazoa:ZK593.5b WormBase:ZK593.5b
OMA:GTLYSEM Uniprot:E2JKZ0
Length = 1351
Score = 176 (67.0 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 37 SFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHG 96
SF IG RV + +GR+ F G+T+FA GDW GV+LD GKN+G V +YF+CEP G
Sbjct: 2 SFEIGTRVKTS-SGNGRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFG 60
Query: 97 IF 98
+F
Sbjct: 61 VF 62
>UNIPROTKB|H0Y7F7 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AL645487 EMBL:AL390718
EMBL:AL590632 HGNC:HGNC:24238 ChiTaRS:CEP350 EMBL:AL353708
ProteinModelPortal:H0Y7F7 PRIDE:H0Y7F7 Ensembl:ENST00000429851
Bgee:H0Y7F7 Uniprot:H0Y7F7
Length = 1292
Score = 175 (66.7 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
S S +S ++ F IGDRV +G + G + F GET FA G WAGV LD P G N+G
Sbjct: 657 SPSLASVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGT 716
Query: 83 VGQARYFQCEPKHGIFS 99
YF+C+ KHGIF+
Sbjct: 717 YDGIAYFECKEKHGIFA 733
Score = 138 (53.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 140 TPGPGL-STPAKGG--DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIG 196
T P L S P D +GDRV++ + Q G+LRFKG T FA+G W GVELD+P G
Sbjct: 655 TESPSLASVPTADELFDFHIGDRVLIGNVQ---PGILRFKGETSFAKGFWAGVELDKPEG 711
Query: 197 KNDG 200
N+G
Sbjct: 712 NNNG 715
>FB|FBgn0019968 [details] [associations]
symbol:Khc-73 "Kinesin-73" species:7227 "Drosophila
melanogaster" [GO:0003777 "microtubule motor activity"
evidence=ISS;IDA] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0051294 "establishment of spindle orientation"
evidence=IMP] [GO:0050803 "regulation of synapse structure and
activity" evidence=IMP] [GO:0035371 "microtubule plus end"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 EMBL:AE013599 GO:GO:0005524
GO:GO:0005871 GO:GO:0042803 GeneTree:ENSGT00700000104150
GO:GO:0050803 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005769 GO:GO:0003777 GO:GO:0035371
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0051294 KO:K10392
OMA:SKNGQPA InterPro:IPR022140 InterPro:IPR022164 Pfam:PF12473
Pfam:PF12423 RefSeq:NP_609201.3 RefSeq:NP_788356.1 UniGene:Dm.350
SMR:A1ZA18 IntAct:A1ZA18 STRING:A1ZA18 EnsemblMetazoa:FBtr0087357
GeneID:36718 KEGG:dme:Dmel_CG8183 UCSC:CG8183-RA CTD:36718
FlyBase:FBgn0019968 InParanoid:A1ZA18 OrthoDB:EOG48W9GT
GenomeRNAi:36718 NextBio:800035 Uniprot:A1ZA18
Length = 1921
Score = 176 (67.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 39 IIGDRVYVGG-TKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
++G+ V + SG I F+G T+F PG W GV LD P GKNDG V +YFQC+PKHG+
Sbjct: 1806 VVGESVLIRPYNTSGVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGM 1865
Query: 98 F 98
F
Sbjct: 1866 F 1866
Score = 124 (48.7 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
I +G+ V++ S GV+RF GTT+F G W GVELD P GKNDG++
Sbjct: 1805 IVVGESVLIRPYNTS--GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSV 1851
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 160 (61.4 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 46 VGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G + G +A+IG T FA G W GV+LD+ GKNDG V RYF CE HGIF
Sbjct: 19 IGKGQRGTVAYIGATLFASGKWVGVILDEAKGKNDGTVQGKRYFTCEENHGIF 71
Score = 40 (19.1 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 143 PGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
PG P +R ++V+ + S+ + R Q G ++ P+ + +G
Sbjct: 759 PGTDAPGIPAALRFSEQVVSEALADSRKQLARVVAVLQEVSA--AGAQMMAPLQEQEG 814
>UNIPROTKB|F1MIC9 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:DAAA02030327 IPI:IPI00718205
UniGene:Bt.4468 Ensembl:ENSBTAT00000006430 ArrayExpress:F1MIC9
Uniprot:F1MIC9
Length = 1239
Score = 157 (60.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 125 GFISPTGSARS--LSFSTPGPGLSTP 148
G + P+GSA + LS S P TP
Sbjct: 128 GSLGPSGSASAGELSSSEPSTPAQTP 153
Score = 34 (17.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 139 STPGPGL 145
S PGPGL
Sbjct: 1038 SVPGPGL 1044
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
>UNIPROTKB|Q5VT06 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005819 "spindle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0005819
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AF287356 EMBL:AL645487
EMBL:AL390718 EMBL:AL590632 EMBL:AF387614 IPI:IPI00103595
PIR:T00263 RefSeq:NP_055625.4 UniGene:Hs.413045 PDB:2COZ
PDBsum:2COZ ProteinModelPortal:Q5VT06 SMR:Q5VT06 IntAct:Q5VT06
MINT:MINT-2867672 STRING:Q5VT06 PhosphoSite:Q5VT06 DMDM:74746869
PaxDb:Q5VT06 PRIDE:Q5VT06 Ensembl:ENST00000367607 GeneID:9857
KEGG:hsa:9857 UCSC:uc001gnt.3 CTD:9857 GeneCards:GC01P179923
H-InvDB:HIX0001384 HGNC:HGNC:24238 HPA:HPA028355 HPA:HPA028357
neXtProt:NX_Q5VT06 PharmGKB:PA143485434 HOGENOM:HOG000111528
HOVERGEN:HBG095435 InParanoid:Q5VT06 OMA:WDALSQT OrthoDB:EOG4M0F0T
PhylomeDB:Q5VT06 ChiTaRS:CEP350 EvolutionaryTrace:Q5VT06
GenomeRNAi:9857 NextBio:37150 ArrayExpress:Q5VT06 Bgee:Q5VT06
CleanEx:HS_CEP350 Genevestigator:Q5VT06 GermOnline:ENSG00000135837
Uniprot:Q5VT06
Length = 3117
Score = 175 (66.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
S S +S ++ F IGDRV +G + G + F GET FA G WAGV LD P G N+G
Sbjct: 2482 SPSLASVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGT 2541
Query: 83 VGQARYFQCEPKHGIFS 99
YF+C+ KHGIF+
Sbjct: 2542 YDGIAYFECKEKHGIFA 2558
Score = 138 (53.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 140 TPGPGL-STPAKGG--DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIG 196
T P L S P D +GDRV++ + Q G+LRFKG T FA+G W GVELD+P G
Sbjct: 2480 TESPSLASVPTADELFDFHIGDRVLIGNVQ---PGILRFKGETSFAKGFWAGVELDKPEG 2536
Query: 197 KNDG 200
N+G
Sbjct: 2537 NNNG 2540
>UNIPROTKB|E1BC48 [details] [associations]
symbol:CEP350 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 OMA:WDALSQT
GeneTree:ENSGT00700000104543 EMBL:DAAA02043478 EMBL:DAAA02043479
EMBL:DAAA02043480 EMBL:DAAA02043481 EMBL:DAAA02043482
EMBL:DAAA02043483 IPI:IPI00687757 Ensembl:ENSBTAT00000010631
ArrayExpress:E1BC48 Uniprot:E1BC48
Length = 3127
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQ 82
S S +S LT++ F IGDRV +G + G + F G T FA G WAGV LD P G N+G
Sbjct: 2493 SPSLASASLTDELLDFHIGDRVLIGNVQPGTLRFKGVTSFAKGFWAGVELDKPEGNNNGT 2552
Query: 83 VGQARYFQCEPKHGIFS 99
YF C+ KHGIF+
Sbjct: 2553 YDGIVYFVCKEKHGIFA 2569
Score = 134 (52.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
D +GDRV++ + Q G LRFKG T FA+G W GVELD+P G N+G
Sbjct: 2507 DFHIGDRVLIGNVQ---PGTLRFKGVTSFAKGFWAGVELDKPEGNNNG 2551
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 155 (59.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/60 (50%), Positives = 37/60 (61%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T A G W GV+LD+ GKNDG V +YF CE HGIF
Sbjct: 30 VGSRVEVIGKGHRGTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYFTCEENHGIF 89
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKN 198
S+ GP +ST A +++G RV V+ +G + G + + G T A G+W GV LDE GKN
Sbjct: 13 SSAGPRMSTEASSKPLKVGSRVEVIG-KGHR-GTVAYVGATLXATGKWVGVILDEAKGKN 70
Query: 199 DGNL 202
DG +
Sbjct: 71 DGTV 74
Score = 40 (19.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 129 PTGSARSL-SFSTPGPGLSTPAKGGDI 154
PT + S S T GP S A GG++
Sbjct: 146 PTRTPTSAPSSGTAGPSGSASASGGEM 172
>UNIPROTKB|D4A8U7 [details] [associations]
symbol:Dctn1 "Dynactin subunit 1" species:10116 "Rattus
norvegicus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] InterPro:IPR000938 Pfam:PF01302 RGD:62038
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 IPI:IPI00951875 Ensembl:ENSRNOT00000068102
ArrayExpress:D4A8U7 Uniprot:D4A8U7
Length = 1239
Score = 157 (60.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+ST A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSTEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
Score = 37 (18.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 127 ISPTGSARS--LSFSTPGPGLSTP 148
+ P+GSA + LS S P TP
Sbjct: 130 LGPSGSASAGELSSSEPSTPAQTP 153
>UNIPROTKB|Q14203 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0003774 "motor activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000922 "spindle pole" evidence=IDA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005874 "microtubule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0007067 "mitosis" evidence=NAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006987 "activation of signaling protein activity
involved in unfolded protein response" evidence=TAS] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0007399 GO:GO:0031252 GO:GO:0006987 GO:GO:0000776
GO:GO:0007067 GO:GO:0019886 GO:GO:0008219 GO:GO:0006810
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
Orphanet:803 GO:GO:0003774 PDB:2HQH PDB:3E2U PDBsum:2HQH
PDBsum:3E2U GO:GO:0005868 CTD:1639 HOVERGEN:HBG004956 KO:K04648
OrthoDB:EOG43TZTR InterPro:IPR022157 Pfam:PF12455 OMA:HVYSRTP
EMBL:AF064205 EMBL:AF064203 EMBL:AF064204 EMBL:AK297286
EMBL:AC005041 EMBL:X98801 EMBL:AF086947 EMBL:AF086927 EMBL:AF086928
EMBL:AF086929 EMBL:AF086930 EMBL:AF086931 EMBL:AF086932
EMBL:AF086933 EMBL:AF086934 EMBL:AF086935 EMBL:AF086936
EMBL:AF086937 EMBL:AF086938 EMBL:AF086939 EMBL:AF086940
EMBL:AF086941 EMBL:AF086942 EMBL:AF086943 EMBL:AF086944
EMBL:AF086945 EMBL:AF086946 EMBL:BT006758 IPI:IPI00219114
IPI:IPI00872359 IPI:IPI00916757 RefSeq:NP_001177766.1
RefSeq:NP_004073.2 RefSeq:NP_075408.1 UniGene:Hs.516111 PDB:1TXQ
PDB:2COY PDB:2HKN PDB:2HKQ PDB:2HL3 PDB:2HL5 PDB:3TQ7 PDBsum:1TXQ
PDBsum:2COY PDBsum:2HKN PDBsum:2HKQ PDBsum:2HL3 PDBsum:2HL5
PDBsum:3TQ7 ProteinModelPortal:Q14203 SMR:Q14203 DIP:DIP-31365N
IntAct:Q14203 MINT:MINT-5004548 STRING:Q14203 PhosphoSite:Q14203
DMDM:17375490 OGP:Q14203 PaxDb:Q14203 PRIDE:Q14203 DNASU:1639
Ensembl:ENST00000361874 Ensembl:ENST00000407639
Ensembl:ENST00000409240 GeneID:1639 KEGG:hsa:1639 UCSC:uc002skv.3
UCSC:uc002skx.3 GeneCards:GC02M074588 H-InvDB:HIX0204314
HGNC:HGNC:2711 HPA:CAB009108 MIM:105400 MIM:168605 MIM:601143
MIM:607641 neXtProt:NX_Q14203 Orphanet:139589 Orphanet:178509
PharmGKB:PA27180 HOGENOM:HOG000015352 PhylomeDB:Q14203
ChiTaRS:DCTN1 EvolutionaryTrace:Q14203 GenomeRNAi:1639 NextBio:6734
PMAP-CutDB:Q14203 ArrayExpress:Q14203 Bgee:Q14203 CleanEx:HS_DCTN1
Genevestigator:Q14203 GermOnline:ENSG00000204843 Uniprot:Q14203
Length = 1278
Score = 157 (60.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 29 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 88
Score = 120 (47.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 132 SARSLSFSTP-GPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVE 190
S R + TP G +S A +R+G RV V+ +G + G + + G T FA G+W GV
Sbjct: 4 SKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVI 61
Query: 191 LDEPIGKNDGNL 202
LDE GKNDG +
Sbjct: 62 LDEAKGKNDGTV 73
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 127 ISPTGSARS--LSFSTPGPGLSTP 148
+ P+GSA + LS S P TP
Sbjct: 167 LGPSGSASAGELSSSEPSTPAQTP 190
Score = 34 (17.0 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 139 STPGPGL 145
S PGPGL
Sbjct: 1080 SVPGPGL 1086
>RGD|62038 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0003777 "microtubule motor activity"
evidence=TAS] [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005868
"cytoplasmic dynein complex" evidence=IDA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302 RGD:62038
GO:GO:0005813 GO:GO:0031252 GO:GO:0000776 GO:GO:0006810
GO:GO:0008017 GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007017 GO:GO:0003777 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 OrthoDB:EOG43TZTR InterPro:IPR022157
Pfam:PF12455 HOGENOM:HOG000015352 EMBL:X62160 IPI:IPI00196703
PIR:S16129 RefSeq:NP_077044.1 UniGene:Rn.11284
ProteinModelPortal:P28023 SMR:P28023 STRING:P28023
PhosphoSite:P28023 PRIDE:P28023 GeneID:29167 KEGG:rno:29167
UCSC:RGD:62038 InParanoid:P28023 NextBio:608216 PMAP-CutDB:P28023
ArrayExpress:P28023 Genevestigator:P28023
GermOnline:ENSRNOG00000010048 Uniprot:P28023
Length = 1280
Score = 157 (60.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 29 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 88
Score = 125 (49.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 132 SARSLSFSTP-GPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVE 190
S R + TP G +ST A +R+G RV V+ +G + G + + G T FA G+W GV
Sbjct: 4 SKRHMYNRTPSGSRMSTEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVI 61
Query: 191 LDEPIGKNDGNL 202
LDE GKNDG +
Sbjct: 62 LDEAKGKNDGTV 73
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 127 ISPTGSARS--LSFSTPGPGLSTP 148
+ P+GSA + LS S P TP
Sbjct: 167 LGPSGSASAGELSSSEPSTPAQTP 190
>MGI|MGI:107745 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=ISO] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005868 "cytoplasmic dynein
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IDA]
InterPro:IPR000938 MGI:MGI:107745 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0006810 GO:GO:0000922
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003774
EMBL:AC160400 GeneTree:ENSGT00700000104055 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OMA:HVYSRTP HOGENOM:HOG000015352 ChiTaRS:DCTN1 EMBL:U60312
EMBL:AK157867 IPI:IPI00115663 IPI:IPI00857569 PIR:JC5368
RefSeq:NP_031861.2 UniGene:Mm.6919 ProteinModelPortal:O08788
SMR:O08788 IntAct:O08788 MINT:MINT-1847327 STRING:O08788
PhosphoSite:O08788 PaxDb:O08788 PRIDE:O08788
Ensembl:ENSMUST00000113918 Ensembl:ENSMUST00000113919 GeneID:13191
KEGG:mmu:13191 InParanoid:O08788 NextBio:283312 Bgee:O08788
CleanEx:MM_DCTN1 Genevestigator:O08788
GermOnline:ENSMUSG00000031865 Uniprot:O08788
Length = 1281
Score = 157 (60.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 29 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 88
Score = 132 (51.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 132 SARSLSFSTP-GPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVE 190
S R +S TP G +ST A +R+G RV V+ +G + G + + G T FA G+W GV
Sbjct: 4 SRRHMSSRTPSGSRMSTEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVI 61
Query: 191 LDEPIGKNDGNL 202
LDE GKNDG +
Sbjct: 62 LDEAKGKNDGTV 73
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 127 ISPTGSARS--LSFSTPGPGLSTP 148
+ P+GSA + LS S P TP
Sbjct: 167 LGPSGSASAGELSSSEPSTPAQTP 190
>UNIPROTKB|F1SNT8 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:CU468647 Ensembl:ENSSSCT00000009061
Uniprot:F1SNT8
Length = 1286
Score = 157 (60.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C+ HGIF
Sbjct: 29 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 88
Score = 120 (47.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 132 SARSLSFSTP-GPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVE 190
S R + TP G +S A +R+G RV V+ +G + G + + G T FA G+W GV
Sbjct: 4 SKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVI 61
Query: 191 LDEPIGKNDGNL 202
LDE GKNDG +
Sbjct: 62 LDEAKGKNDGTV 73
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 127 ISPTGSARS--LSFSTPGPGLSTP 148
+ P+GSA + LS S P TP
Sbjct: 167 LGPSGSASAGELSSSEPSTPAQTP 190
>FB|FBgn0036882 [details] [associations]
symbol:CG9279 species:7227 "Drosophila melanogaster"
[GO:0005869 "dynactin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] InterPro:IPR000938
Pfam:PF01302 EMBL:AE014296 GO:GO:0005869 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007018 GeneTree:ENSGT00700000104055
InterPro:IPR022157 Pfam:PF12455 HSSP:Q20728 EMBL:BT003791
RefSeq:NP_730426.1 UniGene:Dm.15136 SMR:Q7JQV2
EnsemblMetazoa:FBtr0074976 EnsemblMetazoa:FBtr0332758 GeneID:40124
KEGG:dme:Dmel_CG9279 UCSC:CG9279-RA FlyBase:FBgn0036882
InParanoid:Q7JQV2 OMA:AINEKFP OrthoDB:EOG4F7M0V GenomeRNAi:40124
NextBio:817117 Uniprot:Q7JQV2
Length = 1339
Score = 153 (58.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 40 IGDRVYVGGTK-SGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV V G G++A++G T FA G W GVVLD+P+GKN+G V + YF+C G+F
Sbjct: 9 LGQRVEVTGKNLQGKVAYVGRTNFAAGLWYGVVLDEPLGKNNGSVHGSIYFKCPTNCGLF 68
Score = 41 (19.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 140 TPGPGLSTPA 149
TPGP L TP+
Sbjct: 352 TPGPALRTPS 361
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 151 (58.2 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 25 SDSSQVLTED---TDSFIIGDR--VYVGGT--KSGRIAFIGETKFAPGDWAGVVLDDPVG 77
++++Q L E+ S +G R V G + G + ++G T F PG W GV D+P+G
Sbjct: 143 AEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLG 202
Query: 78 KNDGQVGQARYFQCEPKHGIF 98
KNDG V RYF+C+ K+G F
Sbjct: 203 KNDGSVNGKRYFECQAKYGAF 223
Score = 114 (45.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 149 AKGGDIRLGDRVIVMSA-QGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
A+ I +G R V +A Q + G + + G T F G W GV DEP+GKNDG++
Sbjct: 154 AQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSV 208
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 151 (58.2 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 25 SDSSQVLTED---TDSFIIGDRVYVGGT----KSGRIAFIGETKFAPGDWAGVVLDDPVG 77
++SSQ L E+ + +G R V + G + ++G T F PG W GV D+P+G
Sbjct: 143 AESSQRLIEEEAQASAIPVGSRCEVRAPGQPPRRGTVMYVGLTDFKPGYWIGVRYDEPLG 202
Query: 78 KNDGQVGQARYFQCEPKHGIF 98
KNDG V RYF+C+ K+G F
Sbjct: 203 KNDGSVNGKRYFECQAKYGAF 223
Score = 106 (42.4 bits), Expect = 0.00035, P = 0.00035
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 149 AKGGDIRLGDRVIVMS-AQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
A+ I +G R V + Q + G + + G T F G W GV DEP+GKNDG++
Sbjct: 154 AQASAIPVGSRCEVRAPGQPPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSV 208
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 149 (57.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 25 SDSSQVLTED---TDSFIIGDRVYVGGT----KSGRIAFIGETKFAPGDWAGVVLDDPVG 77
++++Q L+E+ + +G R V + G + ++G T F PG W GV D+P+G
Sbjct: 143 AEAAQRLSEEKAQASAISVGSRCEVRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYDEPLG 202
Query: 78 KNDGQVGQARYFQCEPKHGIF 98
KNDG V RYF+C+ K+G F
Sbjct: 203 KNDGSVNGKRYFECQAKYGAF 223
Score = 106 (42.4 bits), Expect = 0.00035, P = 0.00035
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 149 AKGGDIRLGDRVIVMSAQGS-KTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
A+ I +G R V + S + G + + G T F G W GV DEP+GKNDG++
Sbjct: 154 AQASAISVGSRCEVRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSV 208
>DICTYBASE|DDB_G0280435 [details] [associations]
symbol:dynA "dynactin 150 kDa subunit" species:44689
"Dictyostelium discoideum" [GO:0005813 "centrosome" evidence=TAS]
InterPro:IPR000938 dictyBase:DDB_G0280435 Pfam:PF01302
GO:GO:0005813 GenomeReviews:CM000152_GR EMBL:AAFI02000036
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 KO:K04648 InterPro:IPR022157
Pfam:PF12455 RefSeq:XP_641173.1 ProteinModelPortal:Q54VD6
EnsemblProtists:DDB0220487 GeneID:8622553 KEGG:ddi:DDB_G0280435
InParanoid:Q54VD6 OMA:NEIVEYS Uniprot:Q54VD6
Length = 1539
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 31 LTEDTDSFIIGDRVYVGGTKS---GRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQAR 87
++E+ S G RV + G G + + G TKF+PG W G+ LD GKNDG V R
Sbjct: 1 MSEEGKSLPPGTRVSINGKPELGLGTVKYCGMTKFSPGRWVGIELDSAAGKNDGTVQGER 60
Query: 88 YFQCEPKHGIF 98
YF C+P HG+F
Sbjct: 61 YFDCKPAHGLF 71
>ZFIN|ZDB-GENE-070521-1 [details] [associations]
symbol:kif13ba "kinesin family member 13Ba"
species:7955 "Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 ZFIN:ZDB-GENE-070521-1 GO:GO:0005524
GO:GO:0005875 GeneTree:ENSGT00700000104150 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:BX005004
IPI:IPI00500739 Ensembl:ENSDART00000026264 Uniprot:F1QK76
Length = 1761
Score = 162 (62.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
+G RV VG +KSG + +IG T F+ G W GV LD P GKNDG V +YF+C P G+
Sbjct: 1656 VGGRVTVGTSKSGTVRYIGPTHFSEGVWVGVELDTPSGKNDGSVEGHQYFRCNPGFGV 1713
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+++G RV V + SK+G +R+ G T F++G W GVELD P GKNDG++
Sbjct: 1654 LKVGGRVTVGT---SKSGTVRYIGPTHFSEGVWVGVELDTPSGKNDGSV 1699
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 147 (56.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 25 SDSSQVLTED---TDSFIIGDR--VYVGGT--KSGRIAFIGETKFAPGDWAGVVLDDPVG 77
+++SQ L E+ + +G R V G + G + ++G T F PG W G+ D+P+G
Sbjct: 143 AENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTDFKPGYWIGIRYDEPLG 202
Query: 78 KNDGQVGQARYFQCEPKHGIF 98
KNDG V RYF+C+ K+G F
Sbjct: 203 KNDGSVNGKRYFECQAKYGAF 223
Score = 106 (42.4 bits), Expect = 0.00035, P = 0.00035
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 149 AKGGDIRLGDRVIVMS-AQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
A+ I +G R V + Q + G + + G T F G W G+ DEP+GKNDG++
Sbjct: 154 AQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTDFKPGYWIGIRYDEPLGKNDGSV 208
>UNIPROTKB|F1RJP9 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:CT737202 EMBL:CT954336 Ensembl:ENSSSCT00000010618
Uniprot:F1RJP9
Length = 1851
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ +S S+ +E + G+ V VG K+G + ++G T F G W GV LD P GKNDG
Sbjct: 1702 LDVSSDSEEASEVPEWLKEGEYVTVGTNKTGIVRYVGPTDFQEGTWVGVELDLPSGKNDG 1761
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1762 SIGGKQYFKCNPGYGL 1777
Score = 124 (48.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 168 SKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+KTG++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1729 NKTGIVRYVGPTDFQEGTWVGVELDLPSGKNDGSIG 1764
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 136 LSFSTPGPGLSTPA 149
++ S PGPG + PA
Sbjct: 1574 MASSPPGPGPAGPA 1587
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 148 (57.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ + D +V+++D ++ +R+ G++ ++G +F+ G W GV LD P+GKNDG
Sbjct: 187 IKVGDRCKVISDDPTNY--DERL-------GKVQYVGTVEFSSGVWIGVELDLPLGKNDG 237
Query: 82 QVGQARYFQCEPKHGIFS 99
V +YFQC PK+G F+
Sbjct: 238 SVKGKQYFQCSPKYGCFA 255
Score = 117 (46.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 153 DIRLGDRVIVMSAQGS----KTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+I++GDR V+S + + G +++ GT +F+ G W GVELD P+GKNDG++
Sbjct: 186 EIKVGDRCKVISDDPTNYDERLGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSV 239
>UNIPROTKB|E1BGB0 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:DAAA02021955 EMBL:DAAA02021956 IPI:IPI00825744
Ensembl:ENSBTAT00000022902 Uniprot:E1BGB0
Length = 1878
Score = 161 (61.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ +S S+ +E + G+ V VG K+G + ++G T F G W GV LD P GKNDG
Sbjct: 1729 LEVSSDSEEASEVPEWLKEGEYVTVGTNKTGIVRYVGPTDFQEGTWVGVELDLPSGKNDG 1788
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1789 SIGGKQYFKCNPGYGL 1804
Score = 124 (48.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 168 SKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+KTG++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1756 NKTGIVRYVGPTDFQEGTWVGVELDLPSGKNDGSIG 1791
>UNIPROTKB|G4NH27 [details] [associations]
symbol:MGG_03960 "Dynactin ro-3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:CM001236 KO:K04648 InterPro:IPR022157 Pfam:PF12455
RefSeq:XP_003719904.1 ProteinModelPortal:G4NH27
EnsemblFungi:MGG_03960T0 GeneID:2677322 KEGG:mgr:MGG_03960
Uniprot:G4NH27
Length = 1389
Score = 150 (57.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 35 TDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPK 94
T+ +G V + + + FIG T FA GDW GV L D GKNDG V RYF C+
Sbjct: 2 TNVLALGQTVELSDGRIAIVRFIGRTGFAQGDWLGVELPDDSGKNDGSVQGERYFDCDSN 61
Query: 95 HGIF 98
HG+F
Sbjct: 62 HGMF 65
Score = 36 (17.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 129 PTGSARSLSFSTPGPGLSTPAKGGDIRLGDRV 160
P G S+ F+ G G++ GGD L R+
Sbjct: 96 PAGGRPSM-FNGGG-GMAARGTGGDPNLARRM 125
>UNIPROTKB|F1LRB4 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00417373
Ensembl:ENSRNOT00000029757 ArrayExpress:F1LRB4 Uniprot:F1LRB4
Length = 1753
Score = 160 (61.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ ++ S+ +E + G+ V VG K+G + +IG T F G W GV LD P GKNDG
Sbjct: 1611 LEVTSDSEDASEVPEWLREGEYVVVGTNKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDG 1670
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1671 SIGGKQYFRCNPGYGL 1686
Score = 130 (50.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+R G+ V+V + +KTG++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1627 LREGEYVVVGT---NKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIG 1673
>RGD|1303307 [details] [associations]
symbol:Kif13b "kinesin family member 13B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0050770 "regulation of axonogenesis"
evidence=ISO] [GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
Pfam:PF01302 RGD:1303307 GO:GO:0005524 GO:GO:0005875
Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 CTD:23303
IPI:IPI00417373 EMBL:AJ605719 RefSeq:NP_998791.1 UniGene:Rn.212960
ProteinModelPortal:Q70AM4 SMR:Q70AM4 STRING:Q70AM4
PhosphoSite:Q70AM4 PRIDE:Q70AM4 GeneID:305967 KEGG:rno:305967
UCSC:RGD:1303307 InParanoid:Q70AM4 NextBio:655327
ArrayExpress:Q70AM4 Genevestigator:Q70AM4 Uniprot:Q70AM4
Length = 1767
Score = 160 (61.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ ++ S+ +E + G+ V VG K+G + +IG T F G W GV LD P GKNDG
Sbjct: 1625 LEVTSDSEDASEVPEWLREGEYVVVGTNKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDG 1684
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1685 SIGGKQYFRCNPGYGL 1700
Score = 130 (50.8 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+R G+ V+V + +KTG++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1641 LREGEYVVVGT---NKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIG 1687
>UNIPROTKB|D4A996 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 OrthoDB:EOG4BG8V6 IPI:IPI00949029
PRIDE:D4A996 Ensembl:ENSRNOT00000068423 ArrayExpress:D4A996
Uniprot:D4A996
Length = 1827
Score = 160 (61.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ ++ S+ +E + G+ V VG K+G + +IG T F G W GV LD P GKNDG
Sbjct: 1685 LEVTSDSEDASEVPEWLREGEYVVVGTNKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDG 1744
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1745 SIGGKQYFRCNPGYGL 1760
Score = 130 (50.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+R G+ V+V + +KTG++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1701 LREGEYVVVGT---NKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIG 1747
>ASPGD|ASPL0000000137 [details] [associations]
symbol:nudM species:162425 "Emericella nidulans"
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0005869 "dynactin complex" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OrthoDB:EOG4ZGSMC RefSeq:XP_663927.1 ProteinModelPortal:Q5AZF7
EnsemblFungi:CADANIAT00006664 GeneID:2870972 KEGG:ani:AN6323.2
HOGENOM:HOG000165508 OMA:ATAREMD Uniprot:Q5AZF7
Length = 1267
Score = 158 (60.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 45/143 (31%), Positives = 60/143 (41%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIFS 99
IG + + + + FIG T FA G+W GV L D GKNDG V RYF CEP G+F
Sbjct: 6 IGSVIALTDGRQATVRFIGATSFADGEWIGVELTDDTGKNDGSVQGERYFDCEPGFGMFV 65
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXGFISPTGSAR-SLSFSTPGPGLSTPAKGGDIR-LG 157
IS GS+R S++ P P + P+ G +
Sbjct: 66 RPTAVASTPSKSPTKQLTSATPASRPSIS--GSSRPSVAAPKPRPTTTKPSMGPPTQSTT 123
Query: 158 DRVI--VMSAQGSKTGVLRFKGT 178
R +S G+KT +GT
Sbjct: 124 SRAARTSLSGPGNKTNRQSLQGT 146
>UNIPROTKB|F1PIS8 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:AAEX03014334
Ensembl:ENSCAFT00000013047 Uniprot:F1PIS8
Length = 1777
Score = 159 (61.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ +S S+ +E + G+ V VG K G + +IG T F G W GV LD P GKNDG
Sbjct: 1630 LEVSSDSEEASEVPEWLREGEYVTVGTNKMGIVRYIGPTDFQEGTWIGVELDLPSGKNDG 1689
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1690 SIGGKQYFKCNPGYGL 1705
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 128 SPTGSARSLSFSTPGPGLSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWC 187
+P +A L S+ S + +R G+ V V + +K G++R+ G T F +G W
Sbjct: 1622 APAPAAEELEVSSDSEEASEVPEW--LREGEYVTVGT---NKMGIVRYIGPTDFQEGTWI 1676
Query: 188 GVELDEPIGKNDGNLG 203
GVELD P GKNDG++G
Sbjct: 1677 GVELDLPSGKNDGSIG 1692
>UNIPROTKB|F1PIS5 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:AAEX03014334 Ensembl:ENSCAFT00000013053 Uniprot:F1PIS5
Length = 1984
Score = 159 (61.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 22 VSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDG 81
+ +S S+ +E + G+ V VG K G + +IG T F G W GV LD P GKNDG
Sbjct: 1837 LEVSSDSEEASEVPEWLREGEYVTVGTNKMGIVRYIGPTDFQEGTWIGVELDLPSGKNDG 1896
Query: 82 QVGQARYFQCEPKHGI 97
+G +YF+C P +G+
Sbjct: 1897 SIGGKQYFKCNPGYGL 1912
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNLG 203
+R G+ V V + +K G++R+ G T F +G W GVELD P GKNDG++G
Sbjct: 1853 LREGEYVTVGT---NKMGIVRYIGPTDFQEGTWIGVELDLPSGKNDGSIG 1899
>UNIPROTKB|E2RBT3 [details] [associations]
symbol:CEP350 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 OMA:WDALSQT
GeneTree:ENSGT00700000104543 EMBL:AAEX03005114
Ensembl:ENSCAFT00000020139 Uniprot:E2RBT3
Length = 3118
Score = 160 (61.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 35/79 (44%), Positives = 45/79 (56%)
Query: 21 LVSISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKND 80
LVS+S + ++ F IGDRV +G + G + F G T FA G WAGV LD G N+
Sbjct: 2488 LVSVS-----VADELHDFHIGDRVLIGNVQPGTLRFKGVTSFAKGFWAGVELDKAEGNNN 2542
Query: 81 GQVGQARYFQCEPKHGIFS 99
G YF C+ KHGIF+
Sbjct: 2543 GTYDGIVYFVCKEKHGIFA 2561
Score = 126 (49.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 153 DIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDG 200
D +GDRV++ + Q G LRFKG T FA+G W GVELD+ G N+G
Sbjct: 2499 DFHIGDRVLIGNVQ---PGTLRFKGVTSFAKGFWAGVELDKAEGNNNG 2543
Score = 36 (17.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 130 TGSARSLSFSTPGPGLSTPAKGGDIRL 156
T ++ L+F TP P L++PA D L
Sbjct: 785 TVASGPLTF-TPQPYLTSPAAHPDALL 810
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 137 (53.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 25 SDSSQVLTED---TDSFIIGDRVYV---GGT-KSGRIAFIGETKFAPGDWAGVVLDDPVG 77
++++Q L+E+ + +G R V G + G + ++G T F PG W GV +P+G
Sbjct: 143 AEAAQRLSEEEAQASAISVGSRCEVRAPGQSLHRGTVMYVGLTDFKPGYWVGVRYGEPLG 202
Query: 78 KNDGQVGQARYFQCEPKHGIF 98
KNDG V RYF+C+ ++G F
Sbjct: 203 KNDGSVNGKRYFECQARYGAF 223
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 40 IGDRVYV-GGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQC 91
+G RV V G G +A++G T FA G W GV+LD+ GKNDG V +YF C
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 64
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 145 LSTPAKGGDIRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGNL 202
+S A +R+G RV V+ +G + G + + G T FA G+W GV LDE GKNDG +
Sbjct: 1 MSAEASARPLRVGSRVEVIG-KGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTV 56
>FB|FBgn0001108 [details] [associations]
symbol:Gl "Glued" species:7227 "Drosophila melanogaster"
[GO:0001709 "cell fate determination" evidence=IMP] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP]
[GO:0016330 "second mitotic wave involved in compound eye
morphogenesis" evidence=IMP] [GO:0042051 "compound eye
photoreceptor development" evidence=IMP] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0008090 "retrograde axon cargo
transport" evidence=IMP;NAS] [GO:0003777 "microtubule motor
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS]
[GO:0005869 "dynactin complex" evidence=ISS;NAS;TAS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0048477 "oogenesis"
evidence=NAS] [GO:0045502 "dynein binding" evidence=TAS]
[GO:0001754 "eye photoreceptor cell differentiation" evidence=IMP]
[GO:0051028 "mRNA transport" evidence=IMP] [GO:0034501 "protein
localization to kinetochore" evidence=IMP] [GO:0047497
"mitochondrion transport along microtubule" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IMP] [GO:0051383 "kinetochore organization" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0051225
"spindle assembly" evidence=IMP] [GO:0031616 "spindle pole
centrosome" evidence=IDA] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IDA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0035011
"melanotic encapsulation of foreign target" evidence=IMP]
[GO:0035371 "microtubule plus end" evidence=IDA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0006886 EMBL:AE014296
GO:GO:0000776 GO:GO:0007067 GO:GO:0007052 GO:GO:0051225
GO:GO:0048477 GO:GO:0005869 GO:GO:0008090 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0034501 GO:GO:0035371 GO:GO:0051028
GO:GO:0001709 GO:GO:0030286 GO:GO:0003774 GO:GO:0051383
GO:GO:0016330 GO:GO:0031616 GO:GO:0045502 GO:GO:0042052
GO:GO:0045198 GO:GO:0035011 GO:GO:0051299 GO:GO:0005828
GeneTree:ENSGT00700000104055 KO:K04648 InterPro:IPR022157
Pfam:PF12455 EMBL:J02932 EMBL:AY118377 EMBL:BT044559 PIR:A28313
RefSeq:NP_524061.1 UniGene:Dm.12980 ProteinModelPortal:P13496
SMR:P13496 DIP:DIP-21099N IntAct:P13496 MINT:MINT-342315
STRING:P13496 PaxDb:P13496 EnsemblMetazoa:FBtr0075756 GeneID:39536
KEGG:dme:Dmel_CG9206 UCSC:CG9206-RA CTD:39536 FlyBase:FBgn0001108
InParanoid:Q8MT52 OMA:HVYSRTP OrthoDB:EOG49P8DD PhylomeDB:P13496
ChiTaRS:OSTM1 GenomeRNAi:39536 NextBio:814157 Bgee:P13496
GermOnline:CG9206 GO:GO:0047497 Uniprot:P13496
Length = 1265
Score = 148 (57.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 40 IGDRVYVGGTKS-GRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+G RV + G G +A++G T FA G W GVVLD+P GKN G + +YFQC+ G+F
Sbjct: 8 VGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCGMF 67
>UNIPROTKB|F8VPJ2 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 EMBL:AC084262 KO:K10392 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00021753
RefSeq:NP_056069.2 UniGene:Hs.444767 GeneID:23303 KEGG:hsa:23303
CTD:23303 HGNC:HGNC:14405 ChiTaRS:KIF13B GenomeRNAi:23303
NextBio:45145 EMBL:AC108449 EMBL:AC103830 ProteinModelPortal:F8VPJ2
SMR:F8VPJ2 PRIDE:F8VPJ2 Ensembl:ENST00000524189 UCSC:uc003xhh.4
OMA:MQSILNS ArrayExpress:F8VPJ2 Bgee:F8VPJ2 Uniprot:F8VPJ2
Length = 1826
Score = 149 (57.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 41 GDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
G+ V VG K+G + ++G F G W GV LD P GKNDG +G +YF+C P +G+
Sbjct: 1704 GEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGL 1760
Score = 127 (49.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/72 (40%), Positives = 36/72 (50%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGS-------KTGVLRFKGTTQFAQGEWCGVEL 191
+ P PG A D D V +G KTGV+R+ G F +G W GVEL
Sbjct: 1676 NAPAPGAGGQALASDSEEADEVPEWLREGEFVTVGAHKTGVVRYVGPADFQEGTWVGVEL 1735
Query: 192 DEPIGKNDGNLG 203
D P GKNDG++G
Sbjct: 1736 DLPSGKNDGSIG 1747
>UNIPROTKB|Q9NQT8 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007018 "microtubule-based movement"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0006605 "protein
targeting" evidence=TAS] [GO:0042110 "T cell activation"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0050770 "regulation of axonogenesis" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50006 PROSITE:PS50067 SMART:SM00129 SMART:SM00240
Pfam:PF01302 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0005875 GO:GO:0007165 GO:GO:0030424 Gene3D:2.60.200.20
SUPFAM:SSF49879 Pathway_Interaction_DB:arf6cyclingpathway
GO:GO:0050770 GO:GO:0042110 PDB:3FM8 PDB:3MDB PDBsum:3FM8
PDBsum:3MDB eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 GO:GO:0071889 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 EMBL:AF279865
EMBL:AB014539 EMBL:AL583912 IPI:IPI00021753 RefSeq:NP_056069.2
UniGene:Hs.444767 PDB:2COW PDB:3GBJ PDBsum:2COW PDBsum:3GBJ
ProteinModelPortal:Q9NQT8 SMR:Q9NQT8 DIP:DIP-34586N IntAct:Q9NQT8
STRING:Q9NQT8 PhosphoSite:Q9NQT8 DMDM:23396625 PaxDb:Q9NQT8
PRIDE:Q9NQT8 GeneID:23303 KEGG:hsa:23303 CTD:23303
GeneCards:GC08M028924 H-InvDB:HIX0021580 HGNC:HGNC:14405
HPA:HPA025023 MIM:607350 neXtProt:NX_Q9NQT8 PharmGKB:PA30099
OrthoDB:EOG4BG8V6 ChiTaRS:KIF13B EvolutionaryTrace:Q9NQT8
GenomeRNAi:23303 NextBio:45145 CleanEx:HS_KIF13B
Genevestigator:Q9NQT8 GermOnline:ENSG00000197892 Uniprot:Q9NQT8
Length = 1826
Score = 149 (57.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 41 GDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
G+ V VG K+G + ++G F G W GV LD P GKNDG +G +YF+C P +G+
Sbjct: 1704 GEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGL 1760
Score = 127 (49.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/72 (40%), Positives = 36/72 (50%)
Query: 139 STPGPGLSTPAKGGDIRLGDRVIVMSAQGS-------KTGVLRFKGTTQFAQGEWCGVEL 191
+ P PG A D D V +G KTGV+R+ G F +G W GVEL
Sbjct: 1676 NAPAPGAGGQALASDSEEADEVPEWLREGEFVTVGAHKTGVVRYVGPADFQEGTWVGVEL 1735
Query: 192 DEPIGKNDGNLG 203
D P GKNDG++G
Sbjct: 1736 DLPSGKNDGSIG 1747
>SGD|S000006095 [details] [associations]
symbol:NIP100 "Large subunit of the dynactin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000235 "astral
microtubule" evidence=IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IDA] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
InterPro:IPR000938 SGD:S000006095 Pfam:PF01302 GO:GO:0000132
GO:GO:0005737 EMBL:BK006949 GO:GO:0005869 GO:GO:0008017
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0030286 GO:GO:0003774 EMBL:X72227 EMBL:Z73530 PIR:S65186
RefSeq:NP_015151.1 ProteinModelPortal:P33420 SMR:P33420
DIP:DIP-1473N IntAct:P33420 MINT:MINT-389199 STRING:P33420
PRIDE:P33420 EnsemblFungi:YPL174C GeneID:855929 KEGG:sce:YPL174C
CYGD:YPL174c GeneTree:ENSGT00700000104543 OMA:TIAHESA
OrthoDB:EOG4ZGSMC NextBio:980666 Genevestigator:P33420
GermOnline:YPL174C Uniprot:P33420
Length = 868
Score = 137 (53.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 28/53 (52%), Positives = 33/53 (62%)
Query: 42 DRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPK 94
D V V K GR+ FIGET+FA G W G+ LD P+GKNDG RYF + K
Sbjct: 19 DTVLVNEMK-GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDIDLK 70
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 154 IRLGDRVIVMSAQGSKTGVLRFKGTTQFAQGEWCGVELDEPIGKNDGN 201
I L D V+V +G ++F G TQFA+G W G+ELD+P+GKNDG+
Sbjct: 15 ISLQDTVLVNEMKGR----VKFIGETQFAKGIWYGIELDKPLGKNDGS 58
>CGD|CAL0005838 [details] [associations]
symbol:NIP100 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0005869 "dynactin
complex" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0000235 "astral
microtubule" evidence=IEA] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/63 (47%), Positives = 36/63 (57%)
Query: 37 SFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQC-EPKH 95
SF IG V V G I +IG TKFAPG W G+ L P GKN+G V +YF C E +
Sbjct: 2 SFEIGQSVVVKND-IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKEDDN 60
Query: 96 GIF 98
G +
Sbjct: 61 GFY 63
>UNIPROTKB|Q5A6R8 [details] [associations]
symbol:NIP100 "Putative uncharacterized protein NIP100"
species:237561 "Candida albicans SC5314" [GO:0000132 "establishment
of mitotic spindle orientation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/63 (47%), Positives = 36/63 (57%)
Query: 37 SFIIGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQC-EPKH 95
SF IG V V G I +IG TKFAPG W G+ L P GKN+G V +YF C E +
Sbjct: 2 SFEIGQSVVVKND-IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKEDDN 60
Query: 96 GIF 98
G +
Sbjct: 61 GFY 63
>POMBASE|SPAC27D7.13c [details] [associations]
symbol:ssm4 "dynactin microtubule-binding subunit,
p150-Glued Ssm4" species:4896 "Schizosaccharomyces pombe"
[GO:0000743 "nuclear migration involved in conjugation with
cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IGI;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005816 "spindle
pole body" evidence=IDA] [GO:0005869 "dynactin complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule" evidence=IDA]
[GO:0007127 "meiosis I" evidence=IGI] [GO:0007129 "synapsis"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISM]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0030437
"ascospore formation" evidence=IGI] [GO:0030981 "cortical
microtubule cytoskeleton" evidence=IDA] [GO:0030989 "dynein-driven
meiotic oscillatory nuclear movement" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] [GO:0051010
"microtubule plus-end binding" evidence=NAS] InterPro:IPR000938
PomBase:SPAC27D7.13c Pfam:PF01302 EMBL:CU329670 GO:GO:0005816
GO:GO:0034613 GenomeReviews:CU329670_GR GO:GO:0005869 GO:GO:0000753
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0030437 GO:GO:0005881
GO:GO:0051010 GO:GO:0030989 GO:GO:0007131 GO:GO:0000743
GO:GO:0030981 GO:GO:0007129 OrthoDB:EOG4ZGSMC EMBL:AB000269
PIR:T38446 PIR:T38993 RefSeq:NP_594619.1 ProteinModelPortal:O42667
IntAct:O42667 STRING:O42667 EnsemblFungi:SPAC27D7.13c.1
GeneID:2542069 KEGG:spo:SPAC27D7.13c NextBio:20803142
GermOnline:SPAC27D7.13c Uniprot:O42667
Length = 670
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/59 (47%), Positives = 33/59 (55%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+GD V + G + G + F G T F G W GV L + GKNDG V RYF CE GIF
Sbjct: 6 VGDEVLIRG-ELGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGKGIF 63
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 124 (48.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 40 IGDRVYVG-GTKSGRIAFIGETK-FAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPKHG 96
+GDR V G K G + ++G + PG W G+ D+P+GK+DG V R+F+C G
Sbjct: 161 VGDRCQVEPGEKRGMVKYVGRAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQG 219
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 122 (48.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 26/61 (42%), Positives = 31/61 (50%)
Query: 40 IGDRVYVGGTKSGRIAFIGETKFAPGD--WAGVVLDDPVGKNDGQVGQARYFQCEPKHGI 97
+ R G + G I +IG D W GV D+PVGKNDG V RYF + KHG
Sbjct: 154 LNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKNKHGS 213
Query: 98 F 98
F
Sbjct: 214 F 214
>CGD|CAL0005089 [details] [associations]
symbol:orf19.2828 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] InterPro:IPR000938
CGD:CAL0005089 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 EMBL:AACQ01000080 eggNOG:NOG249270
RefSeq:XP_715759.1 ProteinModelPortal:Q5A215 STRING:Q5A215
GeneID:3642574 KEGG:cal:CaO19.2828 Uniprot:Q5A215
Length = 282
Score = 117 (46.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 50 KSGRIAFIGETKFAP-----GDWAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
+ G I FIG K P DW G+ D+PVGKN+G + + F+C+P HG F
Sbjct: 196 RRGIIRFIG--KIMPLDNGENDWVGIEFDEPVGKNNGSIDGVKIFECKPNHGSF 247
>UNIPROTKB|F5H367 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Gene3D:2.30.30.190 SUPFAM:SSF74924 GO:GO:0005881 HGNC:HGNC:10461
ChiTaRS:CLIP1 EMBL:AC048338 EMBL:AC127002 EMBL:AC079406
EMBL:AC093016 IPI:IPI01010166 ProteinModelPortal:F5H367 SMR:F5H367
Ensembl:ENST00000539080 ArrayExpress:F5H367 Bgee:F5H367
Uniprot:F5H367
Length = 83
Score = 97 (39.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 23 SISDSSQVLTEDTDSFIIGDRVYVGGTKSGRIAFIGETKFA 63
S + SS+ E D F +G+RV+V G K G I F+GET+FA
Sbjct: 43 SSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFA 83
>FB|FBgn0034451 [details] [associations]
symbol:TBCB "tubulin-binding cofactor B" species:7227
"Drosophila melanogaster" [GO:0005856 "cytoskeleton" evidence=ISS]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0035089 "establishment
of apical/basal cell polarity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007309 "oocyte axis specification" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031122 GO:GO:0072686
GO:GO:0035089 GO:GO:0007309 UniGene:Dm.19962 FlyBase:FBgn0034451
EMBL:AY061489 ProteinModelPortal:Q7K1S6 STRING:Q7K1S6 PRIDE:Q7K1S6
InParanoid:Q7K1S6 ArrayExpress:Q7K1S6 Bgee:Q7K1S6 Uniprot:Q7K1S6
Length = 271
Score = 107 (42.7 bits), Expect = 0.00032, P = 0.00032
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 39 IIGDR--VYVGG--TKSGRIAFIGETKFAPGDWAGVVLDDPVGKNDGQVGQARYFQCEPK 94
++G R V V G T+ G I + G + G + GV D+P+GKN+G G YF C P
Sbjct: 186 VLGGRCEVTVPGNPTRRGTIRYNGPLEGKSGHFIGVEYDEPLGKNNGSFGGKAYFTCAPN 245
Query: 95 HGIF 98
+G F
Sbjct: 246 YGGF 249
>ASPGD|ASPL0000026322 [details] [associations]
symbol:AN5116 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR000626 Pfam:PF00240 Pfam:PF01302 EMBL:BN001305
eggNOG:COG5244 HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053 EMBL:AACD01000088
RefSeq:XP_662720.1 ProteinModelPortal:Q5B2W4 SMR:Q5B2W4
EnsemblFungi:CADANIAT00003100 GeneID:2871408 KEGG:ani:AN5116.2
Uniprot:Q5B2W4
Length = 272
Score = 105 (42.0 bits), Expect = 0.00060, P = 0.00060
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 67 WAGVVLDDPVGKNDGQVGQARYFQCEPKHGIF 98
W G+ LD+P GKNDG V RYF C + G+F
Sbjct: 214 WVGIELDEPTGKNDGSVNGKRYFMCPNRCGVF 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.138 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 171 0.00090 108 3 11 22 0.44 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 570 (61 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.21u 0.09s 14.30t Elapsed: 00:00:05
Total cpu time: 14.23u 0.09s 14.32t Elapsed: 00:00:05
Start: Thu Aug 15 11:04:16 2013 End: Thu Aug 15 11:04:21 2013