BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18056
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AZI2|CCD47_XENLA Coiled-coil domain-containing protein 47 OS=Xenopus laevis
GN=ccdc47 PE=2 SV=1
Length = 489
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 2 GQLSIQDTIDEMKPLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAE 61
G S++D ++ + PLM V Y++D+VK+FRL+RE K KADKNR RVEE FLK THV R E
Sbjct: 375 GNASVKD-MEALLPLMNMVIYSIDKVKKFRLNREGKQKADKNRARVEENFLKITHVQRQE 433
Query: 62 AAALRKEEKRRLEKEKIMQEEDPEKQRRWEEKEAKRQMKK 101
AA R+EEK+R EKE+IM EEDPEKQRR EE +R+ KK
Sbjct: 434 AAQTRREEKKRAEKERIMNEEDPEKQRRLEEAAQRREQKK 473
>sp|Q5U2X6|CCD47_RAT Coiled-coil domain-containing protein 47 OS=Rattus norvegicus
GN=Ccdc47 PE=2 SV=1
Length = 483
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 15 PLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLE 74
PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EEK+R E
Sbjct: 381 PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE 440
Query: 75 KEKIMQEEDPEKQRRWEEKEAKRQMKK 101
KE+IM EEDPEKQRR EE +R+ KK
Sbjct: 441 KERIMNEEDPEKQRRLEEAALRREQKK 467
>sp|Q9D024|CCD47_MOUSE Coiled-coil domain-containing protein 47 OS=Mus musculus GN=Ccdc47
PE=2 SV=2
Length = 483
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 70/92 (76%)
Query: 10 IDEMKPLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEE 69
++ + PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EE
Sbjct: 376 MESLLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREE 435
Query: 70 KRRLEKEKIMQEEDPEKQRRWEEKEAKRQMKK 101
K+R EKE+IM EEDPEKQRR EE +R+ KK
Sbjct: 436 KKRAEKERIMNEEDPEKQRRLEEAALRREQKK 467
>sp|Q96A33|CCD47_HUMAN Coiled-coil domain-containing protein 47 OS=Homo sapiens GN=CCDC47
PE=1 SV=1
Length = 483
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 15 PLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLE 74
PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EEK+R E
Sbjct: 381 PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE 440
Query: 75 KEKIMQEEDPEKQRRWEEKEAKRQMKK 101
KE+IM EEDPEKQRR EE +R+ KK
Sbjct: 441 KERIMNEEDPEKQRRLEEAALRREQKK 467
>sp|P0C204|CCD47_MACFA Coiled-coil domain-containing protein 47 OS=Macaca fascicularis
GN=CCDC47 PE=2 SV=1
Length = 483
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 15 PLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLE 74
PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EEK+R E
Sbjct: 381 PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE 440
Query: 75 KEKIMQEEDPEKQRRWEEKEAKRQMKK 101
KE+IM EEDPEKQRR EE +R+ KK
Sbjct: 441 KERIMNEEDPEKQRRLEEAALRREQKK 467
>sp|Q3ZC50|CCD47_BOVIN Coiled-coil domain-containing protein 47 OS=Bos taurus GN=CCDC47
PE=2 SV=1
Length = 483
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 15 PLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLE 74
PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EEK+R E
Sbjct: 381 PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE 440
Query: 75 KEKIMQEEDPEKQRRWEEKEAKRQMKK 101
KE+IM EEDPEKQRR EE +R+ KK
Sbjct: 441 KERIMNEEDPEKQRRLEEAALRREQKK 467
>sp|Q5RCI4|CCD47_PONAB Coiled-coil domain-containing protein 47 OS=Pongo abelii GN=CCDC47
PE=2 SV=2
Length = 483
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 15 PLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLE 74
PLM V Y++D+ K+FRL+RE K KADKNR RVEE FLK THV R EAA R+EEK+R E
Sbjct: 381 PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE 440
Query: 75 KEKIMQEEDPEKQRRWEEKEAKRQMKK 101
KE+IM EEDPEKQRR EE +R KK
Sbjct: 441 KERIMNEEDPEKQRRLEEAALRRDQKK 467
>sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 OS=Danio rerio GN=ccdc47
PE=2 SV=1
Length = 486
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 1 MGQLSIQDTIDEMKPLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARA 60
MG S +D +D + PLM V Y++D+VK+ RL+RE K KAD+NR RVEE FLK TH R
Sbjct: 371 MGNTSPKD-MDSLLPLMNMVIYSIDKVKKLRLNREGKQKADRNRARVEENFLKQTHAQRQ 429
Query: 61 EAAALRKEEKRRLEKEKIMQEEDPEKQRRWEEKEAKR 97
EAA R+EEK+R EKE+IM EEDPE+QRR EE +R
Sbjct: 430 EAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRR 466
>sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana
GN=At5g49945 PE=1 SV=1
Length = 480
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 10 IDEMKPLMQFVFYTLDRVKRFRLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEE 69
+D++ L+ + Y +D V R+RLS +A++K + R + E K H AR EA +K E
Sbjct: 379 MDDIVRLVALIPYYIDLVGRYRLSSQARNKTESGRQKAAEEAYKELHNARQEALQKKKAE 438
Query: 70 KRRLEKEKIMQEEDPEKQRRWEEKEAKRQMKKKTPKMK 107
K+++ +E + E R+ E KE RQ+KK PKMK
Sbjct: 439 KKKMMEEA-EAKMSAEVIRKKEAKERARQVKKAVPKMK 475
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 41 DKNRHRVEEAFLKTTHVARAEAAALRK--EEKRRLEKEKIMQEEDPEKQRRWEEKEAKRQ 98
++ R R E+ + EA LRK E+++RL +E+ Q E KQR +E E KR+
Sbjct: 593 EQRRKREEQKKKREAERKAQEAERLRKEAEKQKRLREERERQAEIERKQREQKELEKKRR 652
Query: 99 MKKKTPKMKQLKVK 112
+ + ++++ K K
Sbjct: 653 EEARQNELREKKTK 666
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 36 AKSKADKNRHRV-EEAFLKTTHVARAEAAALRKEEKRRLEKEKIMQEEDPEKQRRWEEKE 94
A+ KA K+ + EEA L+ +AEA L++EE R K+K Q++ E++R +E E
Sbjct: 528 AEEKARKDAEKAAEEASLREIEEKKAEAQRLKREENR---KKKEAQKKADEEERVRKESE 584
Query: 95 AKRQMKKKTPKMKQLKVK 112
+R+++++ + + + K
Sbjct: 585 KQRRLQEQRERQAEQERK 602
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 24 LDRVKRFRLSREAKSK-ADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLEKEKIMQEE 82
L+R K+ +L +E + K ++ R + EEA + + L+++E+ RLE+EK Q +
Sbjct: 2761 LEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQ 2820
Query: 83 DPEKQRRWE------EKEAKRQMKKKTPKMKQLK 110
E+ +R E E+ KRQ +++ K ++LK
Sbjct: 2821 KEEELKRQEQERLQKEEALKRQEQERLQKEEELK 2854
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 24 LDRVKRFRLSREAKSKADKN---RHRVEEAFLKTTHVARAEAAALRKEEK-RRLEKEKIM 79
L R ++ RL RE + + K + + +E K + R E L+KEE+ +R E+E++
Sbjct: 2753 LKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLE 2812
Query: 80 QEEDPEKQRRWEEKEAKRQMKKKTPKMKQLK 110
+E+ + Q+ E+E KRQ +++ K + LK
Sbjct: 2813 REKQEQLQK---EEELKRQEQERLQKEEALK 2840
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 44/80 (55%)
Query: 31 RLSREAKSKADKNRHRVEEAFLKTTHVARAEAAALRKEEKRRLEKEKIMQEEDPEKQRRW 90
R +E K ++ + + +E + + L+++E+ RL+KE+ ++ ++ E+ ++
Sbjct: 2741 RQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2800
Query: 91 EEKEAKRQMKKKTPKMKQLK 110
EE + + Q + + K +QL+
Sbjct: 2801 EELKRQEQERLEREKQEQLQ 2820
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,002,876
Number of Sequences: 539616
Number of extensions: 1391505
Number of successful extensions: 33918
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 904
Number of HSP's that attempted gapping in prelim test: 20349
Number of HSP's gapped (non-prelim): 9166
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)