BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18058
(2301 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
pdb|3EDV|B Chain B, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
Length = 323
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/317 (63%), Positives = 245/317 (77%)
Query: 1702 KLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAV 1761
+LF LNREVDDLEQWIAEREVVAGSHELGQDY+HVT+L ERF+EF RDT IG ERV V
Sbjct: 7 RLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTV 66
Query: 1762 NGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDIL 1821
N +AD+LI +GHSD+ATIAEWKDGLNEAW DLLELI+TRTQ+L AS ELHKF+HD K+I
Sbjct: 67 NHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIF 126
Query: 1822 GRISEKHHAMSDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEK 1881
GRI +KH + +ELGRD +V TLQR H F + ++A+LQA+YAG+K
Sbjct: 127 GRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDK 186
Query: 1882 AKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSE 1941
A +I RE EV+ AW SL +AC++R+ +L DTGD F+F MVR LMLWM+DV+RQ+ E
Sbjct: 187 ADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQE 246
Query: 1942 KARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQ 2001
K RDVS VELLMNNHQ +KAEID R D+FT CI LGK LL+R HYAS EIKEKL+ L+ +
Sbjct: 247 KPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEK 306
Query: 2002 RNALLHRWEERWENLQL 2018
R ++ +WE+RWE L+L
Sbjct: 307 RKEMIDKWEDRWEWLRL 323
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 157/311 (50%), Gaps = 7/311 (2%)
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEM-NANASRVAVVN 909
L++L E D ++QWI E++ + + G+D E V +++ R+ F ++ N RV VN
Sbjct: 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 67
Query: 910 QLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVS 969
LA +L++ H ++ I ++ LN WA L E + + L +++ + F+ + +E
Sbjct: 68 HLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFG 127
Query: 970 WIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP-E 1028
I+DK + L + L D + TLQR + E D+ A+ ++ L+ +A ++ + +
Sbjct: 128 RIQDKHKKL--PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGD 185
Query: 1029 EAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASE 1088
+A+ I++R ++ W+ L + R +L + GD RF + +W+ + ++
Sbjct: 186 KADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQ 245
Query: 1089 DTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAE---PSTHDDPQYMFLRE 1145
+ P ++ E L+N HQ I+ EID + + ++ G+ + A S + + L E
Sbjct: 246 EKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTE 305
Query: 1146 RLKALRDGWEE 1156
+ K + D WE+
Sbjct: 306 KRKEMIDKWED 316
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 18/306 (5%)
Query: 639 KLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKAL-EDEIQAHESQLMSV 697
+L+QL ++ D E WI E+E + + ++G D + +L + + D + ++ +V
Sbjct: 7 RLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTV 66
Query: 698 IAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVD 757
+ DEL+N H A I W +LL+L R + L + + H+F+ DA ++
Sbjct: 67 NHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIF 126
Query: 758 IWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTI-----EALRNQASQLGD 812
+ D + + E++GRD+ V++L + H +++ + + +A R QA+ GD
Sbjct: 127 GRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGD 185
Query: 813 Q----DKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEK 868
+ K EVLE +K LL+ + R+ RL+D ++ FS + W+ +
Sbjct: 186 KADDIQKRENEVLEA-------WKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDV 238
Query: 869 DRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVT 928
R + +D+ VE++ + + G E++A +L + LL +H SE+I
Sbjct: 239 IRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKE 298
Query: 929 RQNQLN 934
+ QL
Sbjct: 299 KLLQLT 304
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 31/274 (11%)
Query: 576 NVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLE 635
N+ ERV +V DE N G D A I E L +A+++L++L R L
Sbjct: 57 NIGQERVDTV----NHLADELINSG--HSDAATIAEWKDGLNEAWADLLELIDTRTQILA 110
Query: 636 ESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQL- 694
S +L + Y D + I++K + + ++G D T+ L H E +IQA +Q+
Sbjct: 111 ASYELHKFYHDAKEIFGRIQDKHKKLPE-ELGRDQNTVETLQRMHTTFEHDIQALGTQVR 169
Query: 695 --------MSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDF 746
+ GD+ AD I+ R + + W++LLD RR RL + D
Sbjct: 170 QLQEDAARLQAAYAGDK--------ADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDK 221
Query: 747 HQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEEL----KNYASTIEA 802
+FF+ D+ +WM D +R + +++ RD ++V+ L+ H+ + E+ ++ + IE
Sbjct: 222 FRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIEL 281
Query: 803 LRNQASQLGDQDKESPEVLERLASIEFRYKELLE 836
+ S L + S E+ E+L + + KE+++
Sbjct: 282 GK---SLLARKHYASEEIKEKLLQLTEKRKEMID 312
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 131/297 (44%), Gaps = 7/297 (2%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAY-EERVQAVVTV 482
+ NR+ E W++E + + G D V ++ D +ERV V +
Sbjct: 10 QLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHL 69
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILDSM 542
+ EL + D I K+ + W LLEL+ I +
Sbjct: 70 ADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRI 129
Query: 543 EELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFR 602
++ K + L ++ G+ VE L + H+ E DI LG +V+ + + + R + G +
Sbjct: 130 QD-KHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARL--QAAYAGDK 186
Query: 603 PCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVS 662
D I +R ++ +A+ L+ RR RL ++ ++ + + D W+++ + +
Sbjct: 187 ADD---IQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIE 243
Query: 663 TGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRL 719
+ D++++ LL++ H+ ++ EI A + I +G L+ ++H+ ++ I+ +L
Sbjct: 244 AQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKL 300
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 2/258 (0%)
Query: 1177 FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLT-TMEANDDKINGVVQFA 1235
NR+ E ++++E V E + E V L +R F T ++++ V A
Sbjct: 11 LNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLA 70
Query: 1236 DRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQ 1295
D L + H A + + D +N+ E + + L +LH+F D +E+ +Q
Sbjct: 71 DELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQ 130
Query: 1296 EKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKP-ELAELI 1354
+K +E R TV + H FE +I + ++ ++Q+ + L + A+ I
Sbjct: 131 DKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDI 190
Query: 1355 GPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSD 1414
+ +++ + + L + + RL D+ + D+ WM ++ +QIE ++ D
Sbjct: 191 QKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRD 250
Query: 1415 LASVNILMQKQQMIETQM 1432
++SV +LM Q I+ ++
Sbjct: 251 VSSVELLMNNHQGIKAEI 268
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 1378 RLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQK-QQMIETQMAVKA 1436
RLF NREV DD++ W+ E E + + G D V +L ++ ++ +
Sbjct: 7 RLFQLNREV------DDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQ 60
Query: 1437 KQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRR 1496
++V + A+ L + I K + + + + E + R + L E ++F
Sbjct: 61 ERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYH 120
Query: 1497 D-------IEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLIC 1549
D I+D+ +KLP E G V L++ + + +I ++ +
Sbjct: 121 DAKEIFGRIQDKH----KKLPE----ELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQ 172
Query: 1550 NNGRKLIDEGHEDSAEFTSLIED-LMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAE 1608
+ +L D A+ E+ +++ W+ L A + RR +L+ + ++ +
Sbjct: 173 EDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLM 232
Query: 1609 SWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPE 1668
WM + + +++ +D S + LM H+ ++ ++ D+ E + L + H
Sbjct: 233 LWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYA 292
Query: 1669 SDQIALKQSQV 1679
S++I K Q+
Sbjct: 293 SEEIKEKLLQL 303
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 1409 EDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVP-DKMEEIVVKKSAV 1467
E+ G D +V L + E + QV +L+ A LQ DK ++I +++ V
Sbjct: 138 EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEV 197
Query: 1468 EQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHML 1527
+ ++ + + +R+ L + ++F + D LW+ + + ++ E + +V +L
Sbjct: 198 LEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELL 257
Query: 1528 KKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEF-----------TSLIEDLMDR 1576
+Q + EID G+ L+ H S E +I+ DR
Sbjct: 258 MNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDR 317
Query: 1577 WQQLK 1581
W+ L+
Sbjct: 318 WEWLR 322
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/463 (44%), Positives = 299/463 (64%), Gaps = 8/463 (1%)
Query: 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHC 110
E Q+KTF W NSHL + +I ++ D RDG L+ LLEV+SGERL +P +GKMR+H
Sbjct: 6 EKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHK 65
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+ NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 66 ISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEET----- 120
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
SAK+ LLLW Q KTA Y NVN++NF SW+DGL F A+IH+HRP+LI + KL K + +
Sbjct: 121 -SAKEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 179
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSKMKQETVQGKRIG 289
NLN AF VAE L + K+LDAEDI +PDEK+I+TYV ++YH FS ++ RI
Sbjct: 180 NLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC 239
Query: 290 KVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVE 349
KV+ + +N++++ +YE L SDLL WI+ TI L +R N++ +QQ+L F +YR +
Sbjct: 240 KVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLH 299
Query: 350 KPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWXXXXXXXXXXXXXXX 409
KPPK EK LE+ TLQ+K+R +N+ + P EGKM+SDIN AW
Sbjct: 300 KPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLL 359
Query: 410 XXXXXXXKLEQLAARFNRKASMRETWLSENQRLVSQDNF-GFDLGAVEAAAKKHEAIETD 468
+L+ LA +F +KAS+ E+W + ++ Q ++ L ++A KKHEA E+D
Sbjct: 360 NEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESD 419
Query: 469 IFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYL 511
+ A+++RV+ + ++QEL Y+D +NAR + + W+ L
Sbjct: 420 LAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNL 462
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 613 VQQLEDAYSELVKLAVERRARLEE-SRKLWQLYWDMADEENWIKEKEQIVSTGDI-GHDL 670
++Q E Y E + + R RL+ + K Q + E+W KE ++ D L
Sbjct: 347 LEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ---KASIHESWTDGKEAMLQQKDYETATL 403
Query: 671 TTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLL 730
+ I LL KH+A E ++ AH+ ++ + A+ EL ++ + + R Q W NL
Sbjct: 404 SEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLG 463
Query: 731 DLAAFRRKRLE------EAVD--FHQFFADAVDVDIWM 760
L RR+ LE E +D + ++ A + WM
Sbjct: 464 ALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWM 501
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 1197 KDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNI 1256
KD L +++ L+K+HEAF + + A+ D++ + A LN+ D+Y + V + I
Sbjct: 396 KDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKI 455
Query: 1257 ND----------RRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDE-T 1305
D +R ER + +ET+ DQL L ++ + W++ QD
Sbjct: 456 CDQWDNLGALTQKRREALERTEKLLETI-DQLYL-EYAKRAAPFNNWMEGAMEDLQDTFI 513
Query: 1306 YRSAKTVHSKWTRHQAFEAEIA-SNKDR 1332
+ + + T H+ F+A + ++K+R
Sbjct: 514 VHTIEEIQGLTTAHEQFKATLPDADKER 541
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 141/333 (42%), Gaps = 41/333 (12%)
Query: 779 VQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPEVLERLASIEFRYKELLEL 837
+++LLKKH+ +L + +E + A +L + D +SP V R I ++ L L
Sbjct: 406 IKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGAL 465
Query: 838 AKLRKQ------RLLDAL-SLYKLFSE-ADGVQQWI-GEKDRMLATMVPGKDIEDVEIMK 888
+ R++ +LL+ + LY +++ A W+ G + + T + IE+++ +
Sbjct: 466 TQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIV-HTIEEIQGLT 524
Query: 889 HRYDGFDKEM-NANASRVAVV---NQLAR--QLLHVEHPNSEQIVTRQNQ-LNHDWAGLR 941
++ F + +A+ R A++ N++++ Q HV + T Q +N W +R
Sbjct: 525 TAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVR 584
Query: 942 EKAEGKRDELNSAHGVQT--------FHIECRETVSWIEDKKRILQSTDSLEMDLTGIMT 993
+ + L H Q F + WI+ K ++ + +++ G +
Sbjct: 585 QLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTK---MEEIGRISIEMHGTLE 641
Query: 994 LQ-RRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLK 1052
Q L E+ + + K+D LE + I++ + + ++ IR+ WEQL +
Sbjct: 642 DQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIA 701
Query: 1053 E-----------RDAKLEEAGDLHRFLRDLDHF 1074
RDAK ++ F +HF
Sbjct: 702 RTINEVENQILTRDAKGISQEQMNEFRASFNHF 734
Score = 37.4 bits (85), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 933 LNHDWAGLREKAEGKRDELNSA--------HGVQTFHIECRETVSWIEDKKRILQSTDSL 984
+N+ W GL + +G + L + H + F + SW + K+ +LQ D
Sbjct: 340 INNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYE 399
Query: 985 EMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIW 1044
L+ I L ++ E DLAA Q +++ + A A + + ++ ++ R ++I W
Sbjct: 400 TATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQW 459
Query: 1045 EQLTQMLKERDAKLE 1059
+ L + ++R LE
Sbjct: 460 DNLGALTQKRREALE 474
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 561 VEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAY 620
++ LL+KH E+D+ +RV+ + +Q E NE D + R Q++ D +
Sbjct: 406 IKALLKKHEAFESDLAAHQDRVEQIAAIAQ-----ELNE-LDYYDSPSVNARCQKICDQW 459
Query: 621 SELVKLAVERRARLEESRKLW----QLYWDMADE----ENWIKEKEQIVSTGDIGHDLTT 672
L L +RR LE + KL QLY + A NW++ + + I H +
Sbjct: 460 DNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEE 519
Query: 673 INLLLSKHKALEDEIQAHESQLMSVIAVGDEL 704
I L + H+ + + + + +++ + +E+
Sbjct: 520 IQGLTTAHEQFKATLPDADKERQAILGIHNEV 551
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 1946 VSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEK----------L 1995
+S ++ L+ H++ ++++ +D ++ +EL ++Y S + + L
Sbjct: 403 LSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNL 462
Query: 1996 VGLSNQRNALLHRWEERWENL-QLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDE 2054
L+ +R L R E+ E + QL LE +A+ AA W+ L + TI+E
Sbjct: 463 GALTQKRREALERTEKLLETIDQLYLE---YAKRAAPFNNWMEGAMEDLQDTFIVHTIEE 519
Query: 2055 VENLIKKHEAFEKS 2068
++ L HE F+ +
Sbjct: 520 IQGLTTAHEQFKAT 533
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 2024 QFARDAAVAEAWLIAQEPYLMSMEL-GLTIDEVENLIKKHEAFEKSAIAQEER 2075
+F + A++ E+W +E L + T+ E++ L+KKHEAFE A ++R
Sbjct: 374 KFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDR 426
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 1465 SAVEQRFEKIKEPLLARQRALEKKKE-AYQFRRDIEDEKLWIAEKLPSAKSTEYGN-SLF 1522
+EQ + +E LL R LE+ A +FR+ + W K + +Y +L
Sbjct: 345 GGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLS 404
Query: 1523 NVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKK 1582
+ L KK+++ ++ H+ R+ I ++L + + DS + + + D+W L
Sbjct: 405 EIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGA 464
Query: 1583 AVDERRSKLIQSEK 1596
+RR L ++EK
Sbjct: 465 LTQKRREALERTEK 478
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 1597 AQQYLFDASEAESWMSEQELYMMVEDRGKDEIS-TQNLMKKHETLELAVEDYADTIRQLG 1655
A+++ AS ESW +E + +D +S + L+KKHE E + + D + Q+
Sbjct: 372 AEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIA 431
Query: 1656 ETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF 1704
A++L + +S + + ++ + L L +RR L+ KL
Sbjct: 432 AIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLL 480
>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human
Erythroid Beta Spectrin (Repeats 13-15) In Complex With
The Spectrin Binding Domain Of Human Erythroid Ankyrin
(Zu5-Ank), Emts Derivative
pdb|3KBU|B Chain B, Crystal Structure Of The Ankyrin Binding Domain Of Human
Erythroid Beta Spectrin (Repeats 13-15) In Complex With
The Spectrin Binding Domain Of Human Erythroid Ankyrin
(Zu5-Ank), Emts Derivative
Length = 326
Score = 317 bits (811), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 217/324 (66%)
Query: 1594 SEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQ 1653
+ +AQQY DA EAE+W+ EQELY++ ++ KDE ++K+H + AVEDY I+Q
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1654 LGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDL 1713
L A+ L S HPE +QI Q QVDK YAGLKD+A ER+ KL+ LF L RE DDL
Sbjct: 63 LASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDL 122
Query: 1714 EQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGH 1773
EQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG ERV VN ++LI AGH
Sbjct: 123 EQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGH 182
Query: 1774 SDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSD 1833
S++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+ +ILG I EKH + +
Sbjct: 183 SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPE 242
Query: 1834 ELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKEITNREAEVV 1893
++G DA + + R H F + + +LQ +YAGEKA+ I N+E EV
Sbjct: 243 DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVS 302
Query: 1894 NAWASLQNACDARKQKLGDTGDLF 1917
AW +L +AC R+ +L DT D F
Sbjct: 303 AAWQALLDACAGRRTQLVDTADKF 326
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 155/319 (48%), Gaps = 5/319 (1%)
Query: 748 QFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQA 807
Q++ DA + + W+ + V S+++ +DE +LK+H +++Y I+ L ++A
Sbjct: 8 QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67
Query: 808 SQLGDQDKESPEVLERL-ASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIG 866
L E + RL ++ Y L ++A RK++L + L++L E D ++QWI
Sbjct: 68 QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDLEQWIS 127
Query: 867 EKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNA-NASRVAVVNQLARQLLHVEHPNSEQ 925
EK+ + ++ G+D + V +++ ++ F +E A RV VN +L+ H +
Sbjct: 128 EKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAAT 187
Query: 926 IVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLE 985
I ++ LN WA L E + + L +++ + + E + I++K R L + +
Sbjct: 188 IAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL--PEDVG 245
Query: 986 MDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP-EEAEAIRERIKQIRIIW 1044
+D + + R + ERD+ + ++ + A ++ + E+AEAI+ + +++ W
Sbjct: 246 LDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAW 305
Query: 1045 EQLTQMLKERDAKLEEAGD 1063
+ L R +L + D
Sbjct: 306 QALLDACAGRRTQLVDTAD 324
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 7/310 (2%)
Query: 1392 CDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVK--AKQVSELETQAEIL 1449
D+ ++W+ E E + +++ D +++++ + Q AV+ + + +L ++A+ L
Sbjct: 13 ADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRH--LRQQRAVEDYGRNIKQLASRAQGL 70
Query: 1450 QKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKL 1509
+ E+I+ + V++ + +K+ R+R LE +Q +R+ +D + WI+EK
Sbjct: 71 LSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDLEQWISEKE 130
Query: 1510 PSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HEPRINLICNNGRKLIDEGHEDSAEFTS 1568
A S E G +V +L+ K + A+E + R++ + +LID GH ++A
Sbjct: 131 LVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAE 190
Query: 1569 LIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEI 1628
+ L + W L + +D R L S +Y + +E + E+ + ED G D
Sbjct: 191 WKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH-RELPEDVGLDAS 249
Query: 1629 STQNLMKKHETLELAVEDYADTIRQLGETARQL-TSEMHPESDQIALKQSQVDKLYAGLK 1687
+ ++ + H E V ++Q + A +L T+ +++ I K+ +V + L
Sbjct: 250 TAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALL 309
Query: 1688 DLAGERRAKL 1697
D RR +L
Sbjct: 310 DACAGRRTQL 319
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 14/281 (4%)
Query: 537 YILDSME------ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQ 590
Y LD+ E E ++ ++SD+ K G +L++H + + G +K + ++Q
Sbjct: 9 YYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQ 68
Query: 591 RFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADE 650
L EG + I+ Q++ Y+ L +A ER+ +LE L+QL + D
Sbjct: 69 GLLSAGHPEGEQ------IIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDL 122
Query: 651 ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HESQLMSVIAVGDELVNQQH 709
E WI EKE + S+ ++G D + LL K + E A + ++ +V A + L++ H
Sbjct: 123 EQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGH 182
Query: 710 FGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSS 769
A I MW +LL+L R + L + D H++F ++ + ++D
Sbjct: 183 SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEI-LGLIDEKHRELP 241
Query: 770 EDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL 810
EDVG D + +S + H ++ ++ ++ A++L
Sbjct: 242 EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRL 282
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 853 KLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLA 912
+ + +AD + WIGE++ + + KD E +M R+ + + + + A
Sbjct: 8 QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67
Query: 913 RQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIE 972
+ LL HP EQI+ Q Q++ +AGL++ A ++ +L + + + E + WI
Sbjct: 68 QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDDLEQWIS 127
Query: 973 DKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAI-QAKLDSLEAEAVAIEKEHPEEAE 1031
+K+ ++ S+ + D + L+ + R+ AI Q ++D++ A + EA
Sbjct: 128 EKE-LVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAA 186
Query: 1032 AIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFL 1068
I E + +W L +++ R L + DLHR+
Sbjct: 187 TIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYF 223
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 580 ERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK 639
ERV +V +R +D +E A I E L + +++L++L R L S
Sbjct: 165 ERVDNVNAFIERLIDAGHSEA------ATIAEWKDGLNEMWADLLELIDTRMQLLAASYD 218
Query: 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIA 699
L + ++ A+ I EK + + D+G D +T H A E ++ Q+
Sbjct: 219 LHRYFYTGAEILGLIDEKHRELPE-DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQD 277
Query: 700 VGDELVNQQHFG--ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVD 745
V L + G A+ I+ + Q+ A WQ LLD A RR +L + D
Sbjct: 278 VATRL-QTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 324
Score = 37.7 bits (86), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 7/268 (2%)
Query: 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKK 1120
A + ++ D D + W+ + + V S++ P A +L +H + +++Y + K+
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDG-WEELHKMWENRXXXXXXXXXXXMFNR 1179
+ + + + + H + + + RL+ D + L + R R
Sbjct: 63 LASRAQGLLS--AGHPEGEQII---RLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKR 117
Query: 1180 DAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFL-TTMEANDDKINGVVQFADRL 1238
+ E +S++E V S E + + V L + F T ++++ V F +RL
Sbjct: 118 ETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERL 177
Query: 1239 NDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKK 1298
D H A + + D +N+ E +M+ L LH++ E+ + EK
Sbjct: 178 IDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH 237
Query: 1299 FTAQDETYRSAKTVHSKWTRHQAFEAEI 1326
++ A T S H AFE ++
Sbjct: 238 RELPEDVGLDASTAESFHRVHTAFERDV 265
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 10/266 (3%)
Query: 1807 SRELHKFFHDCKDILGRISEKH-HAMSDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXX 1865
+ E +++ D + I E+ + +SDE+ +D + ++H
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1866 ICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRT 1925
+ + + L S + ++I + +V +A L++ RK+KL + LF+
Sbjct: 63 LASRAQGL-LSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQLKRETDD 121
Query: 1926 LMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDT----REDNFTACISLGKELL 1981
L W+ + ++ E +D V LL + + E R DN A I + L+
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFI---ERLI 178
Query: 1982 SRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEP 2041
H + I E GL+ LL + R + L +++++ A LI ++
Sbjct: 179 DAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG-LIDEKH 237
Query: 2042 YLMSMELGLTIDEVENLIKKHEAFEK 2067
+ ++GL E+ + H AFE+
Sbjct: 238 RELPEDVGLDASTAESFHRVHTAFER 263
>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human
Erythroid Beta Spectrin (Repeats 13-15) In Complex With
The Spectrin Binding Domain Of Human Erythroid Ankyrin
(Zu5-Ank)
pdb|3KBT|B Chain B, Crystal Structure Of The Ankyrin Binding Domain Of Human
Erythroid Beta Spectrin (Repeats 13-15) In Complex With
The Spectrin Binding Domain Of Human Erythroid Ankyrin
(Zu5-Ank)
Length = 326
Score = 317 bits (811), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 217/324 (66%)
Query: 1594 SEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQ 1653
+ +AQQY DA EAE+W+ EQELY++ ++ KDE ++K+H + AVEDY I+Q
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1654 LGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDL 1713
L A+ L S HPE +QI Q QVDK YAGLKD+A ER+ KL+ LF L RE DDL
Sbjct: 63 LASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDL 122
Query: 1714 EQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGH 1773
EQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG ERV VN ++LI AGH
Sbjct: 123 EQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGH 182
Query: 1774 SDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSD 1833
S++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+ +ILG I EKH + +
Sbjct: 183 SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPE 242
Query: 1834 ELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKEITNREAEVV 1893
++G DA + + R H F + + +LQ +YAGEKA+ I N+E EV
Sbjct: 243 DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVS 302
Query: 1894 NAWASLQNACDARKQKLGDTGDLF 1917
AW +L +AC R+ +L DT D F
Sbjct: 303 AAWQALLDACAGRRTQLVDTADKF 326
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 156/319 (48%), Gaps = 5/319 (1%)
Query: 748 QFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQA 807
Q++ DA + + W+ + V S+++ +DE +LK+H +++Y I+ L ++A
Sbjct: 8 QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67
Query: 808 SQLGDQDKESPEVLERL-ASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIG 866
L E + RL ++ Y L ++A+ RK++L + L++L E D ++QWI
Sbjct: 68 QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWIS 127
Query: 867 EKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNA-NASRVAVVNQLARQLLHVEHPNSEQ 925
EK+ + ++ G+D + V +++ ++ F +E A RV VN +L+ H +
Sbjct: 128 EKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAAT 187
Query: 926 IVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLE 985
I ++ LN WA L E + + L +++ + + E + I++K R L + +
Sbjct: 188 IAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL--PEDVG 245
Query: 986 MDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP-EEAEAIRERIKQIRIIW 1044
+D + + R + ERD+ + ++ + A ++ + E+AEAI+ + +++ W
Sbjct: 246 LDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAW 305
Query: 1045 EQLTQMLKERDAKLEEAGD 1063
+ L R +L + D
Sbjct: 306 QALLDACAGRRTQLVDTAD 324
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 7/310 (2%)
Query: 1392 CDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVK--AKQVSELETQAEIL 1449
D+ ++W+ E E + +++ D +++++ + Q AV+ + + +L ++A+ L
Sbjct: 13 ADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRH--LRQQRAVEDYGRNIKQLASRAQGL 70
Query: 1450 QKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKL 1509
+ E+I+ + V++ + +K+ R+R LE +Q +R+ +D + WI+EK
Sbjct: 71 LSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKE 130
Query: 1510 PSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HEPRINLICNNGRKLIDEGHEDSAEFTS 1568
A S E G +V +L+ K + A+E + R++ + +LID GH ++A
Sbjct: 131 LVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAE 190
Query: 1569 LIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEI 1628
+ L + W L + +D R L S +Y + +E + E+ + ED G D
Sbjct: 191 WKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH-RELPEDVGLDAS 249
Query: 1629 STQNLMKKHETLELAVEDYADTIRQLGETARQL-TSEMHPESDQIALKQSQVDKLYAGLK 1687
+ ++ + H E V ++Q + A +L T+ +++ I K+ +V + L
Sbjct: 250 TAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALL 309
Query: 1688 DLAGERRAKL 1697
D RR +L
Sbjct: 310 DACAGRRTQL 319
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 14/281 (4%)
Query: 537 YILDSME------ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQ 590
Y LD+ E E ++ ++SD+ K G +L++H + + G +K + ++Q
Sbjct: 9 YYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQ 68
Query: 591 RFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADE 650
L EG + I+ Q++ Y+ L +A ER+ +LE L+QL + D
Sbjct: 69 GLLSAGHPEGEQ------IIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDL 122
Query: 651 ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HESQLMSVIAVGDELVNQQH 709
E WI EKE + S+ ++G D + LL K + E A + ++ +V A + L++ H
Sbjct: 123 EQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGH 182
Query: 710 FGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSS 769
A I MW +LL+L R + L + D H++F ++ + ++D
Sbjct: 183 SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEI-LGLIDEKHRELP 241
Query: 770 EDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL 810
EDVG D + +S + H ++ ++ ++ A++L
Sbjct: 242 EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRL 282
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 853 KLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLA 912
+ + +AD + WIGE++ + + KD E +M R+ + + + + A
Sbjct: 8 QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67
Query: 913 RQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIE 972
+ LL HP EQI+ Q Q++ +AGL++ AE ++ +L + + + E + WI
Sbjct: 68 QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWIS 127
Query: 973 DKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAI-QAKLDSLEAEAVAIEKEHPEEAE 1031
+K+ ++ S+ + D + L+ + R+ AI Q ++D++ A + EA
Sbjct: 128 EKE-LVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAA 186
Query: 1032 AIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFL 1068
I E + +W L +++ R L + DLHR+
Sbjct: 187 TIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYF 223
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 7/268 (2%)
Query: 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKK 1120
A + ++ D D + W+ + + V S++ P A +L +H + +++Y + K+
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDG-WEELHKMWENRXXXXXXXXXXXMFNR 1179
+ + + + + H + + + RL+ D + L + E R R
Sbjct: 63 LASRAQGLLS--AGHPEGEQII---RLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKR 117
Query: 1180 DAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFL-TTMEANDDKINGVVQFADRL 1238
+ E +S++E V S E + + V L + F T ++++ V F +RL
Sbjct: 118 ETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERL 177
Query: 1239 NDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKK 1298
D H A + + D +N+ E +M+ L LH++ E+ + EK
Sbjct: 178 IDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH 237
Query: 1299 FTAQDETYRSAKTVHSKWTRHQAFEAEI 1326
++ A T S H AFE ++
Sbjct: 238 RELPEDVGLDASTAESFHRVHTAFERDV 265
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 580 ERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK 639
ERV +V +R +D +E A I E L + +++L++L R L S
Sbjct: 165 ERVDNVNAFIERLIDAGHSEA------ATIAEWKDGLNEMWADLLELIDTRMQLLAASYD 218
Query: 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIA 699
L + ++ A+ I EK + + D+G D +T H A E ++ Q+
Sbjct: 219 LHRYFYTGAEILGLIDEKHRELPE-DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQD 277
Query: 700 VGDELVNQQHFG--ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVD 745
V L + G A+ I+ + Q+ A WQ LLD A RR +L + D
Sbjct: 278 VATRL-QTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 324
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 10/266 (3%)
Query: 1807 SRELHKFFHDCKDILGRISEKH-HAMSDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXX 1865
+ E +++ D + I E+ + +SDE+ +D + ++H
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1866 ICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRT 1925
+ + + L S + ++I + +V +A L++ + RK+KL + LF+
Sbjct: 63 LASRAQGL-LSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 1926 LMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDT----REDNFTACISLGKELL 1981
L W+ + ++ E +D V LL + + E R DN A I + L+
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFI---ERLI 178
Query: 1982 SRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEP 2041
H + I E GL+ LL + R + L +++++ A LI ++
Sbjct: 179 DAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG-LIDEKH 237
Query: 2042 YLMSMELGLTIDEVENLIKKHEAFEK 2067
+ ++GL E+ + H AFE+
Sbjct: 238 RELPEDVGLDASTAESFHRVHTAFER 263
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
W+ + + + E +D G +++ H + ++ N S + LLS H
Sbjct: 19 WIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEG 78
Query: 1989 NEIKEKLVGLSNQRNALLHR-WEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSME 2047
+I +L G ++ A L EER L+ + ++Q R+ E W+ +E S E
Sbjct: 79 EQII-RLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPE 137
Query: 2048 LGLTIDEVENLIKKHEAF--EKSAIAQE 2073
+G D V L K F E AI QE
Sbjct: 138 MGQDFDHVTLLRDKFRDFARETGAIGQE 165
>pdb|2R0O|A Chain A, Crystal Structure Of The Actin-Binding Domain Of Human
Alpha-Actinin-4 Mutant(K255e)
pdb|2R0O|B Chain B, Crystal Structure Of The Actin-Binding Domain Of Human
Alpha-Actinin-4 Mutant(K255e)
Length = 237
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 129/227 (56%), Positives = 172/227 (75%), Gaps = 7/227 (3%)
Query: 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHC 110
E Q+KTF W NSHL + +I ++ D RDG L+ LLEV+SGERLP+P +GKMR+H
Sbjct: 10 EKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHK 69
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+ NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 70 INNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEET----- 124
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
SAK+ LLLWCQ KTA Y NVNV+NF SW+DGLAFNA+IH+HRP+LI+++KL K + +
Sbjct: 125 -SAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVT 183
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFS 276
NLNNAF VAE L + K+LDAEDI +PDE++I+TYV ++YH FS
Sbjct: 184 NLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEEAIMTYVSSFYHAFS 230
>pdb|1TJT|A Chain A, X-Ray Structure Of The Human Alpha-Actinin Isoform 3 At
2.2a Resolution
Length = 250
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 168/231 (72%), Gaps = 7/231 (3%)
Query: 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHC 110
E Q+KTF W NSHL + +I ++ D R+G L+ LLEV+SGERLPRP KGKMR H
Sbjct: 21 EKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHK 80
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+ NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 81 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEET----- 135
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
SAK+ LLLWCQ KTA Y NVNV+NF TSW+DGLA A+IH+HRPDLI + KL K + I
Sbjct: 136 -SAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIG 194
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSKMKQ 280
NLN AF VAE L + K+LDAEDI +PDEK+I+TYV +YH F+ +Q
Sbjct: 195 NLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAFAGAEQ 245
>pdb|1WKU|A Chain A, High Resolution Structure Of The Human Alpha-Actinin
Isoform 3
pdb|1WKU|B Chain B, High Resolution Structure Of The Human Alpha-Actinin
Isoform 3
Length = 254
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 168/231 (72%), Gaps = 7/231 (3%)
Query: 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHC 110
E Q+KTF W NSHL + +I ++ D R+G L+ LLEV+SGERLPRP KGKMR H
Sbjct: 25 EKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHK 84
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+ NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 85 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEET----- 139
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
SAK+ LLLWCQ KTA Y NVNV+NF TSW+DGLA A+IH+HRPDLI + KL K + I
Sbjct: 140 -SAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIG 198
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSKMKQ 280
NLN AF VAE L + K+LDAEDI +PDEK+I+TYV +YH F+ +Q
Sbjct: 199 NLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAFAGAEQ 249
>pdb|2EYI|A Chain A, Crystal Structure Of The Actin-Binding Domain Of Human
Alpha-Actinin 1 At 1.7 Angstrom Resolution
pdb|2EYN|A Chain A, Crystal Structure Of The Actin-Binding Domain Of Human
Alpha-Actinin 1 At 1.8 Angstrom Resolution
Length = 234
Score = 261 bits (668), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 167/231 (72%), Gaps = 7/231 (3%)
Query: 47 ADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKM 106
A E Q+KTF W NSHL + +I ++ D RDG L+ LLEV+SGERL +P +GKM
Sbjct: 1 AGHMEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKM 60
Query: 107 RIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETD 166
R+H + NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 61 RVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEET- 119
Query: 167 NQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS 226
SAK+ LLLWCQ KTA Y NVN++NF SW+DGL F A+IH+HRP+LI + KL K
Sbjct: 120 -----SAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKD 174
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFS 276
+ + NLN AF VAE L + K+LDAEDI +PDEK+I+TYV ++YH FS
Sbjct: 175 DPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFS 225
>pdb|3F7P|A Chain A, Crystal Structure Of A Complex Between Integrin Beta4 And
Plectin
pdb|3F7P|B Chain B, Crystal Structure Of A Complex Between Integrin Beta4 And
Plectin
Length = 296
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/240 (55%), Positives = 168/240 (70%), Gaps = 4/240 (1%)
Query: 39 ERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL 98
ER+ I+ +ADER+ VQKKTF KWVN HL++ I DLY DLRDG L+ LLEVLSG+ L
Sbjct: 60 ERAVIR-IADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSL 118
Query: 99 PRPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQ 158
PR KG+MR H L+NV AL +LR ++V L N+ + DI DGNP+L+LGLIWTIIL FQI
Sbjct: 119 PR-EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQIS 177
Query: 159 DITIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLI 218
DI + + E +AK+ LLLW Q GY + NFT+SWRDG FNAIIH+H+P LI
Sbjct: 178 DIQV--SGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLI 235
Query: 219 QFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
K+ + + NL+ AF+VAE LG+T+LLD ED+ V QPDEKSIITYV + Y ++
Sbjct: 236 DMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 295
>pdb|1MB8|A Chain A, Crystal Structure Of The Actin Binding Domain Of Plectin
Length = 243
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 161/232 (69%), Gaps = 8/232 (3%)
Query: 46 LADERESVQKKTFQKWVNSHLVR-----VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPR 100
+ADER+ VQKKTF KWVN HL++ I DLY DLRDG L+ LLEVLSG+ LPR
Sbjct: 8 IADERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR 67
Query: 101 PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDI 160
KG+MR H L+NV AL +LR ++V L N+ + DI DGNP+L+LGLIWTIIL FQI DI
Sbjct: 68 -EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDI 126
Query: 161 TIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQF 220
+ + E +AK+ LLLW Q GY + NFT+SWRDG FNAIIH+H+P LI
Sbjct: 127 QV--SGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDM 184
Query: 221 EKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
K+ + + NL+ AF+VAE LG+T+LLD ED+ V QPDEKSIITYV + Y
Sbjct: 185 NKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLY 236
>pdb|1SH5|A Chain A, Crystal Structure Of Actin-Binding Domain Of Mouse Plectin
pdb|1SH5|B Chain B, Crystal Structure Of Actin-Binding Domain Of Mouse Plectin
pdb|1SH6|A Chain A, Crystal Structure Of Actin-Binding Domain Of Mouse Plectin
Length = 245
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 159/230 (69%), Gaps = 8/230 (3%)
Query: 48 DERESVQKKTFQKWVNSHLVR-----VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT 102
DER+ VQKKTF KWVN HL++ I DLY DLRDG L+ LLEVLSG+ LPR
Sbjct: 7 DERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR-E 65
Query: 103 KGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITI 162
KG+MR H L+NV AL +LR ++V L N+ + DI DGNP+L+LGLIWTIIL FQI DI +
Sbjct: 66 KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQV 125
Query: 163 EETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEK 222
+ E +AK+ LLLW Q GY + NFTTSWRDG FNAIIH+H+P LI K
Sbjct: 126 --SGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNK 183
Query: 223 LSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
+ + + NL+ AF+VAE LG+T+LLD ED+ V QPDEKSIITYV + Y
Sbjct: 184 VYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLY 233
>pdb|3F57|A Chain A, Crystal Structure Of Human Erythroid Beta Spectrin Repeats
14 And 15 (Ankyrin Binding Domain)
pdb|3F57|B Chain B, Crystal Structure Of Human Erythroid Beta Spectrin Repeats
14 And 15 (Ankyrin Binding Domain)
Length = 225
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 150/222 (67%)
Query: 1697 LDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTE 1756
L+ LF L RE DDLEQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG E
Sbjct: 4 LENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQE 63
Query: 1757 RVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHD 1816
RV VN ++LI AGHS++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+
Sbjct: 64 RVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT 123
Query: 1817 CKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQAS 1876
+ILG I EKH + +++G DA + + R H F + + +LQ +
Sbjct: 124 GAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTA 183
Query: 1877 YAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK 1918
YAGEKA+ I N+E EV AW +L +AC R+ +L DT D F+
Sbjct: 184 YAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 225
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNA-NASRVAVVN 909
L++L E D ++QWI EK+ + ++ G+D + V +++ ++ F +E A RV VN
Sbjct: 10 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 69
Query: 910 QLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVS 969
+L+ H + I ++ LN WA L E + + L +++ + + E +
Sbjct: 70 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 129
Query: 970 WIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP-E 1028
I++K R L + + +D + + R + ERD+ + ++ + A ++ + E
Sbjct: 130 LIDEKHREL--PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGE 187
Query: 1029 EAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHR 1066
+AEAI+ + +++ W+ L R +L + D R
Sbjct: 188 KAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 225
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 1484 ALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HE 1542
ALE +Q +R+ +D + WI+EK A S E G +V +L+ K + A+E +
Sbjct: 3 ALENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQ 62
Query: 1543 PRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLF 1602
R++ + +LID GH ++A + L + W L + +D R L S +Y +
Sbjct: 63 ERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFY 122
Query: 1603 DASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQL- 1661
+E + E+ + ED G D + ++ + H E V ++Q + A +L
Sbjct: 123 TGAEILGLIDEKH-RELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQ 181
Query: 1662 TSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKL 1697
T+ +++ I K+ +V + L D RR +L
Sbjct: 182 TAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQL 217
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 634 LEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HES 692
LE L+QL + D E WI EKE + S+ ++G D + LL K + E A +
Sbjct: 4 LENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQE 63
Query: 693 QLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFAD 752
++ +V A + L++ H A I MW +LL+L R + L + D H++F
Sbjct: 64 RVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT 123
Query: 753 AVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGD 812
++ + ++D EDVG D + +S + H ++ ++ ++ A++L
Sbjct: 124 GAEI-LGLIDEKHRELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRL-- 180
Query: 813 QDKESPEVLERLAS----IEFRYKELLELAKLRKQRLLDALSLYK 853
Q + E E + + + ++ LL+ R+ +L+D ++
Sbjct: 181 QTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 225
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 11/205 (5%)
Query: 433 ETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAY-EERVQAVVTVSQELEAEKY 491
E W+SE + + S G D V K + A +ERV V + L +
Sbjct: 21 EQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGH 80
Query: 492 HDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILDSMEELKMRLLS 551
+ I K+ + +W LLEL+ IL ++E K R L
Sbjct: 81 SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE-KHRELP 139
Query: 552 DDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEET--NEGFRPCDPAII 609
+D G E + H+ E D+++LG +V Q+F D T + I
Sbjct: 140 EDVGLDASTAESFHRVHTAFERDVHLLGVQV-------QQFQDVATRLQTAYAGEKAEAI 192
Query: 610 VERVQQLEDAYSELVKLAVERRARL 634
+ Q++ A+ L+ RR +L
Sbjct: 193 QNKEQEVSAAWQALLDACAGRRTQL 217
>pdb|3EDU|A Chain A, Crystal Structure Of The Ankyrin-Binding Domain Of Human
Erythroid Spectrin
Length = 218
Score = 224 bits (571), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 148/216 (68%)
Query: 1703 LFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVN 1762
LF L RE DDLEQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG ERV VN
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 1763 GIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILG 1822
++LI AGHS++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+ +ILG
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 1823 RISEKHHAMSDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKA 1882
I EKH + +++G DA + + R H F + + +LQ +YAGEKA
Sbjct: 123 LIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKA 182
Query: 1883 KEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK 1918
+ I N+E EV AW +L +AC R+ +L DT D F+
Sbjct: 183 EAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Query: 850 SLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNA-NASRVAVV 908
SL++L E D ++QWI EK+ + ++ G+D + V +++ ++ F +E A RV V
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 909 NQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETV 968
N +L+ H + I ++ LN WA L E + + L +++ + + E +
Sbjct: 62 NAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEIL 121
Query: 969 SWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP- 1027
I++K R L + + +D + + R + ER+L + ++ + A ++ +
Sbjct: 122 GLIDEKHREL--PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAG 179
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHR 1066
E+AEAI+ + +++ W+ L R +L + D R
Sbjct: 180 EKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 1492 YQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HEPRINLICN 1550
+Q +R+ +D + WI+EK A S E G +V +L+ K + A+E + R++ +
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 63
Query: 1551 NGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESW 1610
+LID GH ++A + L + W L + +D R L S +Y + +E
Sbjct: 64 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGL 123
Query: 1611 MSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQL-TSEMHPES 1669
+ E+ + ED G D + ++ + H E + ++Q + A +L T+ ++
Sbjct: 124 IDEKH-RELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKA 182
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKL 1697
+ I K+ +V + L D RR +L
Sbjct: 183 EAIQNKEQEVSAAWQALLDACAGRRTQL 210
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HESQLMSVI 698
L+QL + D E WI EKE + S+ ++G D + LL K + E A + ++ +V
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 699 AVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDI 758
A + L++ H A I MW +LL+L R + L + D H++F ++ +
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEI-L 121
Query: 759 WMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESP 818
++D EDVG D + +S + H EL ++ ++ A++L Q +
Sbjct: 122 GLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRL--QTAYAG 179
Query: 819 EVLERLAS----IEFRYKELLELAKLRKQRLLDALSLYK 853
E E + + + ++ LL+ R+ +L+D ++
Sbjct: 180 EKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
>pdb|3LBX|B Chain B, Crystal Structure Of The Erythrocyte Spectrin
Tetramerization Domain Complex
Length = 185
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 128/175 (73%)
Query: 1911 GDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNF 1970
G T D F+F M R L+ WM+ ++RQ+ T E+ RDVS VELLM HQ + AEI+TR NF
Sbjct: 1 GSTADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNF 60
Query: 1971 TACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAA 2030
+AC+ LG+ LL R H AS EI+EKL + ++R + +WE RWE L+++LEV QF+RDA+
Sbjct: 61 SACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 2031 VAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTF 2085
VAEAWLIAQEPYL S + G T+D VE LIK+HEAFEKS + ERF+ALE+ TT
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTL 175
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 1062 GDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKM 1121
D RF W+ + +++ P ++ E L+ HQ I EI+ ++++
Sbjct: 4 ADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSAC 63
Query: 1122 MDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDA 1181
++ GE + + +RE+L+ + +E+++ WE R F+RDA
Sbjct: 64 LELGESLLQRQHQASEE----IREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDA 119
Query: 1182 KQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAF 1217
AE L QE L+ + ++ VE LIKRHEAF
Sbjct: 120 SVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAF 155
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 744 VDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEEL----KNYAST 799
D +FF+ A D+ WM +R + +++ RD ++V+ L+K H+ + E+ KN+++
Sbjct: 4 ADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSAC 63
Query: 800 IEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEAD 859
+E S L Q + S E+ E+L + R KE+ E + R +RL L + + +A
Sbjct: 64 LEL---GESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 860 GVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQ 910
+ W+ ++ LA+ G ++ VE + R++ F+K + A R A + +
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEK 171
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 644 YWDMA-DEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGD 702
++ MA D +W++ + + T + D++++ LL+ H+ + EI+ + + +G+
Sbjct: 9 FFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGE 68
Query: 703 ELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLD 762
L+ +QH ++ IR +LQ M+ + + + R +RL ++ QF DA + W++
Sbjct: 69 SLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIA 128
Query: 763 TVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEAL 803
++S D G +V+ L+K+H+ + ++A AL
Sbjct: 129 QEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 1394 DIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTV 1453
D+ SWM + +QIE ++ D++SV +LM+ Q I ++ ++K S E L +
Sbjct: 15 DLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQ 74
Query: 1454 PDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAK 1513
EEI K V R +++ E AR L E QF RD + W+ + P
Sbjct: 75 HQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLA 134
Query: 1514 STEYGNSLFNVHMLKKKNQSLAK 1536
S ++G+++ +V L K++++ K
Sbjct: 135 SGDFGHTVDSVEKLIKRHEAFEK 157
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%)
Query: 1504 WIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDS 1563
W+ + ++ E + +V +L K +Q + EI+ + G L+ H+ S
Sbjct: 19 WMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQAS 78
Query: 1564 AEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDR 1623
E ++ +M R +++ + + R +L + Q+ DAS AE+W+ QE Y+ D
Sbjct: 79 EEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGDF 138
Query: 1624 GKDEISTQNLMKKHETLELAVEDYADTIRQL 1654
G S + L+K+HE E + +A+ L
Sbjct: 139 GHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 1187 LLSQQEHVLSKDET---PVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDH 1243
LLS E ++ + ET P ++ VE L+K H+ +E + ++ + L H
Sbjct: 16 LLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQH 75
Query: 1244 YAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEW-VQEKKFTAQ 1302
A++++++K + RR E+ + E L+ L++ QF +D W + ++ + A
Sbjct: 76 QASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLAS 135
Query: 1303 DETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEK 1347
+ + +V RH+AFE AS +R +++ + +KE+
Sbjct: 136 GDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKER 180
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 1609 SWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPE 1668
SWM + ++R +D S + LMK H+ + +E + E L H
Sbjct: 18 SWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQA 77
Query: 1669 SDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHE 1728
S++I K QV + + R +L L++ +R+ E W+ +E S +
Sbjct: 78 SEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGD 137
Query: 1729 LGQDYDHVTLLWERFKEFDRDTEAIGTERVAAV 1761
G D V L +R + F++ T A ER AA+
Sbjct: 138 FGHTVDSVEKLIKRHEAFEKST-ASWAERFAAL 169
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 852 YKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQL 911
++ FS A + W+ R + T +D+ VE++ + G + E+ + + +L
Sbjct: 7 FRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLEL 66
Query: 912 ARQLLHVEHPNSE-------QIVTRQNQLNHDW 937
LL +H SE Q+++R+ ++N W
Sbjct: 67 GESLLQRQHQASEEIREKLQQVMSRRKEMNEKW 99
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAV 479
+F+R AS+ E WL + ++ +FG + +VE K+HEA E ++ ER A+
Sbjct: 113 CQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 960 FHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDS-LEAE 1018
F R+ +SW+E R ++ T D++ + L + G+ ++ + LE
Sbjct: 9 FFSMARDLLSWMESIIRQIE-TQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELG 67
Query: 1019 AVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWL 1078
++++H + +E IRE+++Q+ +++ + + R +L ++ +F RD + WL
Sbjct: 68 ESLLQRQH-QASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWL 126
Query: 1079 TKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKM 1121
+ +AS D ++ EKL+ +H+A + ++ E + +
Sbjct: 127 IAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169
Score = 38.1 bits (87), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 538 ILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEET 597
+L ME + ++ + + + + VE L++ H + A+I + + ++ + L +
Sbjct: 16 LLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQH 75
Query: 598 NEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEK 657
I E++QQ+ E+ + R RL ++ Q D + E W+ +
Sbjct: 76 QAS------EEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQ 129
Query: 658 EQIVSTGDIGHDLTTINLLLSKHKALE 684
E +++GD GH + ++ L+ +H+A E
Sbjct: 130 EPYLASGDFGHTVDSVEKLIKRHEAFE 156
>pdb|1QAG|A Chain A, Actin Binding Region Of The Dystrophin Homologue Utrophin
pdb|1QAG|B Chain B, Actin Binding Region Of The Dystrophin Homologue Utrophin
Length = 226
Score = 211 bits (537), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 150/222 (67%), Gaps = 4/222 (1%)
Query: 53 VQKKTFQKWVNSHLVRVS-CRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCL 111
VQKKTF KW+N+ + I D + DL+DG+ LL LLE L+G LP+ +G R+H L
Sbjct: 2 VQKKTFTKWINARFSKSGKPPINDXFTDLKDGRKLLDLLEGLTGTSLPK-ERGSTRVHAL 60
Query: 112 ENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIE-ETDNQET 170
NV++ LQ L + V L N+G DIVDGN +L+LGL+W+IIL +Q++D+ + +D Q+T
Sbjct: 61 NNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQVKDVXKDVXSDLQQT 120
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
S K LL W + T Y VNV NFTTSW DGLAFNA++H+H+PDL ++K+ K + I
Sbjct: 121 NSEK-ILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKXSPIE 179
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
L +AF+ A+ LG+ KLLD ED+ V PD+KSII Y+ + +
Sbjct: 180 RLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIXYLTSLF 221
>pdb|1DXX|A Chain A, N-Terminal Actin-Binding Domain Of Human Dystrophin
pdb|1DXX|B Chain B, N-Terminal Actin-Binding Domain Of Human Dystrophin
pdb|1DXX|C Chain C, N-Terminal Actin-Binding Domain Of Human Dystrophin
pdb|1DXX|D Chain D, N-Terminal Actin-Binding Domain Of Human Dystrophin
Length = 246
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 151/231 (65%), Gaps = 3/231 (1%)
Query: 49 ERESVQKKTFQKWVNSHLVRVSCR-IGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMR 107
ERE VQKKTF KWVN+ + + I +L+ DL+DG+ LL LLE L+G++LP+ KG R
Sbjct: 12 EREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKE-KGSTR 70
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDN 167
+H L NV+KAL+ L+ V L N+GS DIVDGN +L+LGLIW IIL +Q++++
Sbjct: 71 VHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAG 130
Query: 168 QETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEK-LSKS 226
+ +++ LL W + T Y VNV NFTTSW DGLA NA+IH HRPDL + +S+
Sbjct: 131 LQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQ 190
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSK 277
+A L +AF +A +LG+ KLLD ED+ PD+KSI+ Y+ + + +
Sbjct: 191 SATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQ 241
>pdb|1WYQ|A Chain A, Solution Structure Of The Second Ch Domain Of Human
Spectrin Beta Chain, Brain 2
Length = 127
Score = 196 bits (498), Expect = 1e-49, Method: Composition-based stats.
Identities = 91/117 (77%), Positives = 99/117 (84%)
Query: 170 TKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAI 229
+ AKDALLLWCQMKTAGY NVNV NFTTSWRDGLAFNAI+HKHRPDL+ FE L K NA
Sbjct: 5 SSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAH 64
Query: 230 YNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQETVQGK 286
YNL NAF +AE +LGLTKLLD ED+ V+QPDEKSIITYV TYYHYFSKMK V+GK
Sbjct: 65 YNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGK 121
>pdb|1AA2|A Chain A, Calponin Homology (Ch) Domain From Human Beta-Spectrin
Length = 108
Score = 191 bits (484), Expect = 6e-48, Method: Composition-based stats.
Identities = 90/108 (83%), Positives = 96/108 (88%)
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
KSAKDALLLWCQMKTAGY NVN+ NFTTSWRDG+AFNA+IHKHRPDLI F+KL KSNA Y
Sbjct: 1 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHY 60
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
NL NAF +AE LGLTKLLD EDI V+ PDEKSIITYVVTYYHYFSKM
Sbjct: 61 NLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKM 108
>pdb|1BKR|A Chain A, Calponin Homology (Ch) Domain From Human Beta-Spectrin At
1.1 Angstrom Resolution
Length = 109
Score = 190 bits (482), Expect = 8e-48, Method: Composition-based stats.
Identities = 90/108 (83%), Positives = 96/108 (88%)
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
KSAKDALLLWCQMKTAGY NVN+ NFTTSWRDG+AFNA+IHKHRPDLI F+KL KSNA Y
Sbjct: 2 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHY 61
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
NL NAF +AE LGLTKLLD EDI V+ PDEKSIITYVVTYYHYFSKM
Sbjct: 62 NLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKM 109
>pdb|1S35|A Chain A, Crystal Structure Of Repeats 8 And 9 Of Human Erythroid
Spectrin
Length = 214
Score = 166 bits (421), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Query: 1067 FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGE 1126
FL+DLD FQ WL+ TQ VASED P SL +AE+LL QH I++EID + + Y+++ + GE
Sbjct: 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGE 64
Query: 1127 KVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDAKQAEV 1186
KV DP+Y+ L +RL+ L GW+ L +MWE+R F +DAKQAE
Sbjct: 65 KVI---QGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEA 121
Query: 1187 LLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAA 1246
+LS QE+ L+ E P +LE E I++ E FL +ME N DK+ V ++L E + +
Sbjct: 122 ILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYS 181
Query: 1247 DKVKKKADNINDRRNANKERAHQQMETLKDQLQ 1279
DK+K+K I DR N E+A + L+D L+
Sbjct: 182 DKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 1919 FLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGK 1978
FL + W+ + + + + + E L+ H +K EID +D++ G+
Sbjct: 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGE 64
Query: 1979 ELL-SRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLI 2037
+++ + + ++L GL +AL WE R L L +F +DA AEA L
Sbjct: 65 KVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILS 124
Query: 2038 AQEPYLMSMELGLTIDEVENLIKKHEAF 2065
QE L +E +++ E I+K E F
Sbjct: 125 NQEYTLAHLEPPDSLEAAEAGIRKFEDF 152
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 1494 FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGR 1553
F +D++D + W++ + S + SL L +++ + EID H+ + +G
Sbjct: 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGE 64
Query: 1554 KLIDEGHEDSAEFTSL---IEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESW 1610
K+I +G D E+ L +E L W L + + R L Q Q++ DA +AE+
Sbjct: 65 KVI-QGQTD-PEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1611 MSEQELYMMVEDRGKDEI-STQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
+S QE Y + D + + + ++K E ++E+ D + ++ +L +E + S
Sbjct: 123 LSNQE-YTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYS 181
Query: 1670 DQI 1672
D+I
Sbjct: 182 DKI 184
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 749 FFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQAS 808
F D D W+ T + V+SED+ + LL++H + +E+ + + + ++
Sbjct: 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGE 64
Query: 809 QL--GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIG 866
++ G D E + +RL ++ + L + + R L L + +A + +
Sbjct: 65 KVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILS 124
Query: 867 EKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRV 905
++ LA + P +E E +++ F M N +V
Sbjct: 125 NQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKV 163
Score = 37.7 bits (86), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 646 DMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELV 705
D+ D + W+ ++ V++ D+ L LL +H ++DEI H+ V G++++
Sbjct: 8 DLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVI 67
Query: 706 NQQHFGADRIRG-RLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADA 753
Q + G RL+ W L + R L + + F +F DA
Sbjct: 68 QGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDA 116
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 1033 IRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPS 1092
+ +R++ + W+ L +M + R L + F +D + L+ + +A + P
Sbjct: 78 LGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPD 137
Query: 1093 SLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRD 1152
SL AE + + + ++N + +D G K+ AE + + D ++E+++ + D
Sbjct: 138 SLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDK----IKEKVQLIED 193
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
pdb|1U4Q|B Chain B, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
Length = 322
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 6/245 (2%)
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
+ E++ L S+DYGK L V +LL+KH L+EADI+ +R+K + Q+ + T+ F
Sbjct: 19 LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM---TSSAF 75
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIV 661
D + + ++ + + + + +A RRA+L ES +L Q + DM DEE+WIKEK+ +V
Sbjct: 76 ---DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLV 132
Query: 662 STGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQD 721
S+ D G DLT + L KHK LE E+ AHE + V+ G +L + G + I+ RL
Sbjct: 133 SSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQ 192
Query: 722 TMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQS 781
+ W+ L LAA R +RLEE++++ QF A+ + + W+ + + LV+SED G A +Q
Sbjct: 193 FVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQG 252
Query: 782 LLKKH 786
LLKKH
Sbjct: 253 LLKKH 257
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 166/318 (52%)
Query: 1382 SNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSE 1441
+N++ + D D W++E+E + +ED G DLASVN L++K Q++E ++ ++ +
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 1442 LETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDE 1501
L +QA+ L + ++ K+ + RF++IK AR+ L + +QF RD++DE
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 1502 KLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHE 1561
+ WI EK S +YG L V L+KK++ L E+ HEP I + + G+KL D+
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 1562 DSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVE 1621
E + +D W++LK+ R +L +S + QQ++ + E E+W++E+ + E
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASE 241
Query: 1622 DRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDK 1681
D G + Q L+KKHE E + D + + L + + + I K +
Sbjct: 242 DYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKG 301
Query: 1682 LYAGLKDLAGERRAKLDE 1699
+ L+ A +R+AKLDE
Sbjct: 302 KVSDLEKAAAQRKAKLDE 319
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 653 WIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGA 712
W+ E E ++++ D G DL ++N LL KH+ LE +I AHE +L + + D L+ F
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 713 DRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDV 772
+++ + + +Q + +AA RR +L E+ HQFF D D + W+ + LVSSED
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDY 137
Query: 773 GRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPEVLERLASIEFRY 831
GRD VQ+L KKHK + EL + I+ + + +L D + E+ +RLA +
Sbjct: 138 GRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHW 197
Query: 832 KELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRY 891
KEL +LA R QRL ++L + + + + WI EK ++A+ G + ++ + ++
Sbjct: 198 KELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKH 257
Query: 892 DGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKR 948
+ F+ + + RV V L+ + + E I + L + L EKA +R
Sbjct: 258 EAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDL-EKAAAQR 313
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 159/322 (49%), Gaps = 14/322 (4%)
Query: 425 FNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQ 484
FN + WLSE + L++ +++G DL +V KKH+ +E DI A+E+R++ + + +
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 485 ELEAEKYHDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILDSME- 543
L D ++ ++E + N + +K+ +D E
Sbjct: 68 SLMTSSAFDTSQVKDKRETI----NGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 544 ---ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEG 600
E K+ + S+DYG+ L GV++L +KH +EA++ ++ V+ ++ D+ T
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT--- 180
Query: 601 FRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQI 660
I +R+ Q D + EL +LA R RLEES + Q ++ +EE WI EK +
Sbjct: 181 ---IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTL 237
Query: 661 VSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQ 720
V++ D G L I LL KH+A E + H+ ++ V A G++L+ + + + I +++
Sbjct: 238 VASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK 297
Query: 721 DTMAMWQNLLDLAAFRRKRLEE 742
+L AA R+ +L+E
Sbjct: 298 GLKGKVSDLEKAAAQRKAKLDE 319
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 1494 FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGR 1553
F I+D W++E S +YG L +V+ L KK+Q L +I HE R+ + +
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 1554 KLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSE 1613
L+ D+++ E + R+Q++K RR+KL +S + Q+ D + ESW+ E
Sbjct: 68 SLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127
Query: 1614 QELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIA 1673
++L + ED G+D QNL KKH+ LE + + I+ + +T ++L+ + ++I
Sbjct: 128 KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQ 187
Query: 1674 LKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDY 1733
+ +Q + LK LA R +L+E+L+ V++ E WI E+ + S + G
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTL 247
Query: 1734 DHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDL 1793
+ L ++ + F+ D + +RV V + LI + I GL DL
Sbjct: 248 AAIQGLLKKHEAFETDF-TVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDL 306
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 149/311 (47%), Gaps = 1/311 (0%)
Query: 1177 FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFAD 1236
FN K + LS+ E +L+ ++ +L V NL+K+H+ + A++D++ + AD
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 1237 RLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQE 1296
L + +VK K + IN R K A + L + +LHQF +D ++ W++E
Sbjct: 68 SLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127
Query: 1297 KKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIG 1355
KK E Y R V + +H+ EAE+A+++ + V +G +L + E I
Sbjct: 128 KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQ 187
Query: 1356 PKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDL 1415
+++ + +L+ +G+RL +S ++ ++W+NE + +ED G L
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTL 247
Query: 1416 ASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIK 1475
A++ L++K + ET V +V+++ E L K +E I K ++ + ++
Sbjct: 248 AAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLE 307
Query: 1476 EPLLARQRALE 1486
+ R+ L+
Sbjct: 308 KAAAQRKAKLD 318
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 141/272 (51%), Gaps = 1/272 (0%)
Query: 864 WIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNS 923
W+ E + +LA+ GKD+ V + ++ + +++A+ R+ +N A L+ ++
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 924 EQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDS 983
Q+ ++ +N + ++ A +R +LN +H + F + + SWI++KK +L S++
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKK-LLVSSED 136
Query: 984 LEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRII 1043
DLTG+ L+++ +E +LAA + + + + ++ E I++R+ Q
Sbjct: 137 YGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDH 196
Query: 1044 WEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQ 1103
W++L Q+ R +LEE+ + +F+ +++ + W+ + T VASED +LA + LL +
Sbjct: 197 WKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKK 256
Query: 1104 HQAIREEIDNYTEDYKKMMDYGEKVTAEPSTH 1135
H+A + + + + GE + + + H
Sbjct: 257 HEAFETDFTVHKDRVNDVCANGEDLIKKNNHH 288
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 12/264 (4%)
Query: 1610 WMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
W+SE E + ED GKD S NL+KKH+ LE + + D ++ L A L + ++
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHEL 1729
Q+ K+ ++ + +K +A RRAKL+E+ +L R++DD E WI E++++ S +
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDY 137
Query: 1730 GQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIA--EWKDGLN 1787
G+D V L ++ K + + A A+ G+ D SD TI E + L
Sbjct: 138 GRDLTGVQNLRKKHKRLEAELAA----HEPAIQGVLD--TGKKLSDDNTIGKEEIQQRLA 191
Query: 1788 E---AWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVN 1843
+ W++L +L R Q L S E +F + ++ I+EK + S++ G ++
Sbjct: 192 QFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQ 251
Query: 1844 TLQRKHQNFXXXXXXXXXXXXXIC 1867
L +KH+ F +C
Sbjct: 252 GLLKKHEAFETDFTVHKDRVNDVC 275
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 755 DVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQD 814
D D W+ + L++SED G+D A+V +LLKKH+ + ++ + ++ L +QA L
Sbjct: 14 DFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSS 73
Query: 815 K-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLA 873
++ +V ++ +I R++ + +A R+ +L ++ L++ F + D + WI EK +++
Sbjct: 74 AFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVS 133
Query: 874 TMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQL 933
+ G+D+ V+ ++ ++ + E+ A+ + V ++L E+I R Q
Sbjct: 134 SEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQF 193
Query: 934 NHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMT 993
W L++ A + L + Q F E +WI +K ++ S D + L I
Sbjct: 194 VDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDT-LAAIQG 252
Query: 994 LQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKE 1053
L ++ E D + +++ + A + K++ E I ++K ++ L + +
Sbjct: 253 LLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQ 312
Query: 1054 RDAKLEE 1060
R AKL+E
Sbjct: 313 RKAKLDE 319
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 3/294 (1%)
Query: 1706 LNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIA 1765
N + D + W++E E + S + G+D V L ++ + + D A +R+ +N A
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISA-HEDRLKDLNSQA 66
Query: 1766 DQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRIS 1825
D L+ + D++ + + ++ +N +Q + + R L S LH+FF D D I
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 1826 EKHHAMSDE-LGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKE 1884
EK +S E GRD V L++KH+ + + KL K +E
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK-EE 185
Query: 1885 ITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKAR 1944
I R A+ V+ W L+ AR Q+L ++ + +F+ V W+++ + + + +
Sbjct: 186 IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGD 245
Query: 1945 DVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGL 1998
++ ++ L+ H++ + + +D + G++L+ +N++ I K+ GL
Sbjct: 246 TLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGL 299
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 5/307 (1%)
Query: 1074 FQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS 1133
F WL++ + +ASED LA LL +HQ + +I + + K + + + S
Sbjct: 15 FDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMT-SS 73
Query: 1134 THDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDAKQAEVLLSQQEH 1193
D Q ++++ + + ++ + M R F RD E + +++
Sbjct: 74 AFDTSQ---VKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKL 130
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
++S ++ +L V+NL K+H+ + A++ I GV+ +L+D++ ++++++
Sbjct: 131 LVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRL 190
Query: 1254 DNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYR-SAKTV 1312
D K+ A + + L++ L+ QF+ + EE W+ EK E Y + +
Sbjct: 191 AQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAI 250
Query: 1313 HSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTT 1372
+H+AFE + +KDR+ V +G +L+K+ E I K+ L + DLE
Sbjct: 251 QGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAA 310
Query: 1373 KDKGERL 1379
+ +L
Sbjct: 311 AQRKAKL 317
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 1832 SDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKEITNREAE 1891
S++ G+D SVN L +KHQ + +++ L S A + ++ RE
Sbjct: 28 SEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRET- 86
Query: 1892 VVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVEL 1951
+ + +++ AR+ KL ++ L +F + W+ + +++ + RD++GV+
Sbjct: 87 INGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQN 146
Query: 1952 LMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEE 2011
L H+ L+AE+ E + GK+L N EI+++L + L
Sbjct: 147 LRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA 206
Query: 2012 RWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIA 2071
R + L+ LE QF + EAW+ + + S + G T+ ++ L+KKHEAFE
Sbjct: 207 RGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTV 266
Query: 2072 QEERFS 2077
++R +
Sbjct: 267 HKDRVN 272
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
+F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q V+
Sbjct: 113 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTG 172
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILDSME 543
++L + + I R + W L +L A ++ + E
Sbjct: 173 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA------RGQRLEESLEYQQFVANVEE 226
Query: 544 E-----LKMRLL-SDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEET 597
E KM L+ S+DYG L ++ LL+KH E D V +RV V + + +
Sbjct: 227 EEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN 286
Query: 598 NEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
+ I +++ L+ S+L K A +R+A+L+E+
Sbjct: 287 HH------VENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 320
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 2035 WLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
WL E L S + G + V NL+KKH+ E A E+R L
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 62
>pdb|1HCI|A Chain A, Crystal Structure Of The Rod Domain Of Alpha-Actinin
pdb|1HCI|B Chain B, Crystal Structure Of The Rod Domain Of Alpha-Actinin
Length = 476
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 293 GIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPP 352
+ +N+R++ EYE L S+LL WI+ TI L +R ++ +Q++L F +YR KPP
Sbjct: 4 AVNQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPP 63
Query: 353 KFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWXXXXXXXXXXXXXXXXXX 412
K EK LE+ TLQ+K+R +N+ + P EGKM+SDI AW
Sbjct: 64 KVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEI 123
Query: 413 XXXXKLEQLAARFNRKASMRETW-LSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFA 471
+LE LA +F +KAS ETW + Q L+ +D L V A +KHEA E+D+ A
Sbjct: 124 RRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAA 183
Query: 472 YEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYL 511
+++RV+ + ++QEL YHD +N R + + W+ L
Sbjct: 184 HQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRL 223
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 34/330 (10%)
Query: 565 LQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELV 624
+Q+ +E + N L +++ + F+ +EG D A +R++Q E Y E +
Sbjct: 65 VQEKCQLEINFNTLQTKLR--ISNRPAFM---PSEGKMVSDIAGAWQRLEQAEKGYEEWL 119
Query: 625 KLAVERRARLEE-SRKLWQLYWDMADEENWIKEKEQIVSTGDI-GHDLTTINLLLSKHKA 682
+ R RLE + K Q + E W KEQI+ D LT + LL KH+A
Sbjct: 120 LNEIRRLERLEHLAEKFRQ---KASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEA 176
Query: 683 LEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLE- 741
E ++ AH+ ++ + A+ EL + A + R Q W L L RR+ LE
Sbjct: 177 FESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALER 236
Query: 742 -----EAVD-FHQFFAD-AVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKH---KDVTE 791
E +D H FA A + WM + + + +QSL+ H K
Sbjct: 237 MEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLP 296
Query: 792 ELKNYASTIEALRNQASQLGDQ-----DKESPEVLERLASIEFRYKELLELAKLRKQRLL 846
E +I A++N+ ++ +P + + ++ ++ +L +R Q L
Sbjct: 297 EADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQ 356
Query: 847 DALS-------LYKLF-SEADGVQQWIGEK 868
+ L+ L + F ++A+ + WI K
Sbjct: 357 EELARQHANERLRRQFAAQANAIGPWIQNK 386
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
+L KD +L +V L+++HEAF + + A+ D++ + A LN+ D++ A V +
Sbjct: 154 LLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRC 213
Query: 1254 DNIND----------RRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQD 1303
I D +R ER + +ET+ DQL L +F + W++ QD
Sbjct: 214 QKICDQWDRLGTLTQKRREALERMEKLLETI-DQLHL-EFAKRAAPFNNWMEGAMEDLQD 271
Query: 1304 E-TYRSAKTVHSKWTRHQAFEAEI 1326
S + + S T H+ F+A +
Sbjct: 272 MFIVHSIEEIQSLITAHEQFKATL 295
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 39/289 (13%)
Query: 549 LLSDDY-GKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPA 607
LL DY L V LL+KH E+D+ +RV+ + +Q E NE D
Sbjct: 154 LLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQ-----ELNE-LDYHDAV 207
Query: 608 IIVERVQQLEDAYSELVKLAVERRARLEESRKLW----QLYWDMADE----ENWIKEKEQ 659
+ +R Q++ D + L L +RR LE KL QL+ + A NW++ +
Sbjct: 208 NVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAME 267
Query: 660 IVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQ-QHFGADRIRGR 718
+ I H + I L++ H+ + + + + S++A+ +E+ Q +
Sbjct: 268 DLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSN 327
Query: 719 LQDTMAM------WQNLLDLAAFRRKRLEEAVDFH--------QFFADAVDVDIWMLDTV 764
T+ M W + L R + L+E + QF A A + W+ + +
Sbjct: 328 PYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKM 387
Query: 765 RLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL-GD 812
E++ R + L +D +LK Y I +N +L GD
Sbjct: 388 -----EEIARSSIQITGAL---EDQMNQLKQYEHNIINYKNNIDKLEGD 428
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 955 HGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDS 1014
H + F + +W K++IL D LT + L R+ E DLAA Q +++
Sbjct: 131 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 190
Query: 1015 LEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKER-------DAKLEEAGDLH-R 1066
+ A A + + +A + +R ++I W++L + ++R + LE LH
Sbjct: 191 IAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLE 250
Query: 1067 FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIR 1108
F + F W+ D+ S+ + + L+ H+ +
Sbjct: 251 FAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFK 292
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 1946 VSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEK----------L 1995
++ V L+ H++ ++++ +D ++ +EL +++ + + ++ L
Sbjct: 164 LTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRL 223
Query: 1996 VGLSNQRNALLHRWEERWENL-QLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDE 2054
L+ +R L R E+ E + QL LE FA+ AA W+ L M + +I+E
Sbjct: 224 GTLTQKRREALERMEKLLETIDQLHLE---FAKRAAPFNNWMEGAMEDLQDMFIVHSIEE 280
Query: 2055 VENLIKKHEAFEKS 2068
+++LI HE F+ +
Sbjct: 281 IQSLITAHEQFKAT 294
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2024 QFARDAAVAEAWLIAQEPYLMSMEL-GLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
+F + A+ E W +E L+ + ++ EV L++KHEAFE A ++R +
Sbjct: 135 KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQI 191
>pdb|4B7L|A Chain A, Crystal Structure Of Human Filamin B Actin Binding Domain
With 1st Filamin Repeat
pdb|4B7L|B Chain B, Crystal Structure Of Human Filamin B Actin Binding Domain
With 1st Filamin Repeat
Length = 347
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R+ RPT +M+
Sbjct: 17 IQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQ 76
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEE--T 165
LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I E+
Sbjct: 77 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGD 133
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
D+ + ++ K LL W Q K + + NF +W+DG A A++ P L +E
Sbjct: 134 DDAKKQTPKQRLLGWIQNKIP---YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 190
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
+ N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 191 PQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQF 237
>pdb|2WA5|A Chain A, Crystal Structure Of Human Filamin B Actin Binding Domain
At 1.9 Angstroms Resolution
Length = 245
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R+ RPT +M+
Sbjct: 20 IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQ 79
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEE--T 165
LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I E+
Sbjct: 80 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGD 136
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
D+ + ++ K LL W Q K + + NF +W+DG A A++ P L +E
Sbjct: 137 DDAKKQTPKQRLLGWIQNKIP---YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 193
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
+ N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 194 PQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQF 240
>pdb|2WA7|A Chain A, Structure Of The M202v Mutant Of Human Filamin B Actin
Binding Domain At 1.85 Angstroms Resolution
Length = 245
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R+ RPT +M+
Sbjct: 20 IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQ 79
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEE--T 165
LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I E+
Sbjct: 80 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGD 136
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
D+ + ++ K LL W Q K + + NF +W+DG A A++ P L +E
Sbjct: 137 DDAKKQTPKQRLLGWIQNKIP---YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 193
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
+ N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 194 PQKPVDNAREAVQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQF 240
>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain
Alpha Spectrin
Length = 216
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 121/204 (59%), Gaps = 6/204 (2%)
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
+ E++ L S+DYGK L V +LL+KH L+EADI+ +R+K + Q+ + T+ F
Sbjct: 19 LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM---TSSAF 75
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIV 661
D + + ++ + + + + +A RRA+L ES +L Q + DM DEE+WIKEK+ +V
Sbjct: 76 ---DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLV 132
Query: 662 STGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQD 721
S+ D G DLT + L KHK LE E+ AHE + V+ G +L + G + I+ RL
Sbjct: 133 SSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQ 192
Query: 722 TMAMWQNLLDLAAFRRKRLEEAVD 745
+ W+ L LAA R +RLEE+++
Sbjct: 193 FVDHWKELKQLAAARGQRLEESLE 216
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%)
Query: 1382 SNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSE 1441
+N++ + D D W++E+E + +ED G DLASVN L++K Q++E ++ ++ +
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 1442 LETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDE 1501
L +QA+ L + ++ K+ + RF++IK AR+ L + +QF RD++DE
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 1502 KLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHE 1561
+ WI EK S +YG L V L+KK++ L E+ HEP I + + G+KL D+
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 1562 DSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQS 1594
E + +D W++LK+ R +L +S
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 653 WIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGA 712
W+ E E ++++ D G DL ++N LL KH+ LE +I AHE +L + + D L+ F
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 713 DRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDV 772
+++ + + +Q + +AA RR +L E+ HQFF D D + W+ + LVSSED
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDY 137
Query: 773 GRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPEVLERLASIEFRY 831
GRD VQ+L KKHK + EL + I+ + + +L D + E+ +RLA +
Sbjct: 138 GRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHW 197
Query: 832 KELLELAKLRKQRLLDAL 849
KEL +LA R QRL ++L
Sbjct: 198 KELKQLAAARGQRLEESL 215
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%)
Query: 1494 FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGR 1553
F I+D W++E S +YG L +V+ L KK+Q L +I HE R+ + +
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 1554 KLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSE 1613
L+ D+++ E + R+Q++K RR+KL +S + Q+ D + ESW+ E
Sbjct: 68 SLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127
Query: 1614 QELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIA 1673
++L + ED G+D QNL KKH+ LE + + I+ + +T ++L+ + ++I
Sbjct: 128 KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQ 187
Query: 1674 LKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
+ +Q + LK LA R +L+E+L
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEESL 215
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 1610 WMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
W+SE E + ED GKD S NL+KKH+ LE + + D ++ L A L + ++
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHEL 1729
Q+ K+ ++ + +K +A RRAKL+E+ +L R++DD E WI E++++ S +
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDY 137
Query: 1730 GQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIA--EWKDGLN 1787
G+D V L ++ K + + A A+ G+ D SD TI E + L
Sbjct: 138 GRDLTGVQNLRKKHKRLEAELAA----HEPAIQGVLD--TGKKLSDDNTIGKEEIQQRLA 191
Query: 1788 E---AWQDLLELIETRTQMLVASRE 1809
+ W++L +L R Q L S E
Sbjct: 192 QFVDHWKELKQLAAARGQRLEESLE 216
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 425 FNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQ 484
FN + WLSE + L++ +++G DL +V KKH+ +E DI A+E+R++ + + +
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 485 ELEAEKYHDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILDSME- 543
L D ++ ++E + N + +K+ +D E
Sbjct: 68 SLMTSSAFDTSQVKDKRETI----NGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 544 ---ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEG 600
E K+ + S+DYG+ L GV++L +KH +EA++ ++ V+ ++ D+ T
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT--- 180
Query: 601 FRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
I +R+ Q D + EL +LA R RLEES
Sbjct: 181 ---IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 1177 FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFAD 1236
FN K + LS+ E +L+ ++ +L V NL+K+H+ + A++D++ + AD
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 1237 RLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQE 1296
L + +VK K + IN R K A + L + +LHQF +D ++ W++E
Sbjct: 68 SLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127
Query: 1297 KKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIG 1355
KK E Y R V + +H+ EAE+A+++ + V +G +L + E I
Sbjct: 128 KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQ 187
Query: 1356 PKISDLGQQFDDLETTTKDKGERLFDS 1382
+++ + +L+ +G+RL +S
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Query: 864 WIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNS 923
W+ E + +LA+ GKD+ V + ++ + +++A+ R+ +N A L+ ++
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 924 EQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDS 983
Q+ ++ +N + ++ A +R +LN +H + F + + SWI++KK +L S++
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKK-LLVSSED 136
Query: 984 LEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRII 1043
DLTG+ L+++ +E +LAA + + + + ++ E I++R+ Q
Sbjct: 137 YGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDH 196
Query: 1044 WEQLTQMLKERDAKLEEA 1061
W++L Q+ R +LEE+
Sbjct: 197 WKELKQLAAARGQRLEES 214
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 103/197 (52%), Gaps = 3/197 (1%)
Query: 755 DVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQD 814
D D W+ + L++SED G+D A+V +LLKKH+ + ++ + ++ L +QA L
Sbjct: 14 DFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSS 73
Query: 815 K-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLA 873
++ +V ++ +I R++ + +A R+ +L ++ L++ F + D + WI EK +++
Sbjct: 74 AFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVS 133
Query: 874 TMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQL 933
+ G+D+ V+ ++ ++ + E+ A+ + V ++L E+I R Q
Sbjct: 134 SEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQF 193
Query: 934 NHDWAGLRE--KAEGKR 948
W L++ A G+R
Sbjct: 194 VDHWKELKQLAAARGQR 210
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 1706 LNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIA 1765
N + D + W++E E + S + G+D V L ++ + + D A +R+ +N A
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISA-HEDRLKDLNSQA 66
Query: 1766 DQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRIS 1825
D L+ + D++ + + ++ +N +Q + + R L S LH+FF D D I
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 1826 EKHHAMSDE-LGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKE 1884
EK +S E GRD V L++KH+ + + KL K +E
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK-EE 185
Query: 1885 ITNREAEVVNAWASLQNACDARKQKL 1910
I R A+ V+ W L+ AR Q+L
Sbjct: 186 IQQRLAQFVDHWKELKQLAAARGQRL 211
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 954 AHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLD 1013
A+ Q F+ ++ W+ + + +L S D DL + L ++ +E D++A + +L
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASED-YGKDLASVNNLLKKHQLLEADISAHEDRLK 60
Query: 1014 SLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDH 1073
L ++A ++ + ++++ + I ++++ M R AKL E+ LH+F RD+D
Sbjct: 61 DLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD 120
Query: 1074 FQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS 1133
+ W+ + + V+SED L + L +H+ + E+ + + ++D G+K++ + +
Sbjct: 121 EESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180
Query: 1134 THDDPQYMFLRERLKALRDGWEELHKM 1160
+ +++RL D W+EL ++
Sbjct: 181 IGKEE----IQQRLAQFVDHWKELKQL 203
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%)
Query: 1919 FLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGK 1978
F ++ W+ +V + + + +D++ V L+ HQ L+A+I ED S
Sbjct: 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67
Query: 1979 ELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIA 2038
L++ + + ++++K+K ++ + + R L ++QF RD E+W+
Sbjct: 68 SLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKE 127
Query: 2039 QEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQE 2073
++ + S + G + V+NL KKH+ E A E
Sbjct: 128 KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 162
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 1832 SDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAKEITNREAE 1891
S++ G+D SVN L +KHQ + +++ L S A + ++ RE
Sbjct: 28 SEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRET- 86
Query: 1892 VVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVEL 1951
+ + +++ AR+ KL ++ L +F + W+ + +++ + RD++GV+
Sbjct: 87 INGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQN 146
Query: 1952 LMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLV 1996
L H+ L+AE+ E + GK+L N EI+++L
Sbjct: 147 LRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLA 191
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 1074 FQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS 1133
F WL++ + +ASED LA LL +HQ + +I + + K + + + S
Sbjct: 15 FDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMT-SS 73
Query: 1134 THDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDAKQAEVLLSQQEH 1193
D Q ++++ + + ++ + M R F RD E + +++
Sbjct: 74 AFDTSQ---VKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKL 130
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKK 1252
++S ++ +L V+NL K+H+ + A++ I GV+ +L+D++ ++++++
Sbjct: 131 LVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQR 189
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 1293 WVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELA 1351
W+ E + E Y + +V++ +HQ EA+I++++DRL + LM
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77
Query: 1352 ELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDT 1411
+ K + +F +++ + +L +S+R + DD +SW+ E + + +ED
Sbjct: 78 SQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDY 137
Query: 1412 GSDLASVNILMQKQQMIETQMAV 1434
G DL V L +K + +E ++A
Sbjct: 138 GRDLTGVQNLRKKHKRLEAELAA 160
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
+F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q V+
Sbjct: 113 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTG 172
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKA 517
++L + + I R + W L +L A
Sbjct: 173 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA 206
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 2035 WLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
WL E L S + G + V NL+KKH+ E A E+R L
Sbjct: 18 WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 62
>pdb|3FER|A Chain A, Crystal Structure Of N-Terminal Actin-Binding Domain From
Human Filamin B (Tandem Ch-Domains). Northeast
Structural Genomics Consortium Target Hr5571a.
pdb|3FER|B Chain B, Crystal Structure Of N-Terminal Actin-Binding Domain From
Human Filamin B (Tandem Ch-Domains). Northeast
Structural Genomics Consortium Target Hr5571a.
pdb|3FER|C Chain C, Crystal Structure Of N-Terminal Actin-Binding Domain From
Human Filamin B (Tandem Ch-Domains). Northeast
Structural Genomics Consortium Target Hr5571a.
pdb|3FER|D Chain D, Crystal Structure Of N-Terminal Actin-Binding Domain From
Human Filamin B (Tandem Ch-Domains). Northeast
Structural Genomics Consortium Target Hr5571a
Length = 262
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R RPT R
Sbjct: 27 IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRXYRKYHQRPT---FR 83
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEE--T 165
LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I E+
Sbjct: 84 QXQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISXPVWEDEGD 143
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
D+ + ++ K LL W Q K + + NF +W+DG A A++ P L +E
Sbjct: 144 DDAKKQTPKQRLLGWIQNKIP---YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 200
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
+ N A A+D LG+ +++ E+I DE S+ TY+ +
Sbjct: 201 PQKPVDNAREAXQQADDWLGVPQVITPEEIIHPDVDEHSVXTYLSQF 247
>pdb|2WA6|A Chain A, Structure Of The W148r Mutant Of Human Filamin B Actin
Binding Domain At 1.95 Angstroms Resolution
Length = 245
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 124/227 (54%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R+ RPT +M+
Sbjct: 20 IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQ 79
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEE--T 165
LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I E+
Sbjct: 80 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGD 136
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
D+ + ++ K LL Q K + + NF +W+DG A A++ P L +E
Sbjct: 137 DDAKKQTPKQRLLGRIQNKIP---YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD 193
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
+ N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 194 PQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQF 240
>pdb|3HOP|A Chain A, Structure Of The Actin-Binding Domain Of Human Filamin A
pdb|3HOP|B Chain B, Structure Of The Actin-Binding Domain Of Human Filamin A
pdb|3HOR|A Chain A, Structure Of The Actin-Binding Domain Of Human Filamin A
(Reduced)
pdb|3HOR|B Chain B, Structure Of The Actin-Binding Domain Of Human Filamin A
(Reduced)
Length = 272
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL VS RI +L DL DG L+ LLEVLS +++ RPT +M+
Sbjct: 47 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQ 106
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDN 167
LENV AL+FL + + L ++ S IVDGN +L LGLIWT+IL + I +E ++
Sbjct: 107 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEED 163
Query: 168 QETK--SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
+E K + K LL W Q K + + NF+ W+ G A A++ P L ++
Sbjct: 164 EEAKKQTPKQRLLGWIQNKLP---QLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWD 220
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
S + N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 221 ASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQF 267
>pdb|2WFN|A Chain A, Filamin A Actin Binding Domain
pdb|2WFN|B Chain B, Filamin A Actin Binding Domain
Length = 278
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL VS RI +L DL DG L+ LLEVLS +++ RPT +M+
Sbjct: 44 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQ 103
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDN 167
LENV AL+FL + + L ++ S IVDGN +L LGLIWT+IL + I +E ++
Sbjct: 104 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEED 160
Query: 168 QETK--SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
+E K + K LL W Q K + + NF+ W+ G A A++ P L ++
Sbjct: 161 EEAKKQTPKQRLLGWIQNKLP---QLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWD 217
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
S + N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 218 ASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQF 264
>pdb|3HOC|A Chain A, Structure Of The Actin-Binding Domain Of Human Filamin A
Mutant E254k
pdb|3HOC|B Chain B, Structure Of The Actin-Binding Domain Of Human Filamin A
Mutant E254k
Length = 272
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Query: 53 VQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMR 107
+Q+ TF +W N HL VS RI +L DL DG L+ LLEVLS +++ RPT +M+
Sbjct: 47 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQ 106
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDN 167
LENV AL+FL + + L ++ S IVDGN +L LGLIWT+IL + I +E ++
Sbjct: 107 ---LENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEED 163
Query: 168 QETK--SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLS 224
+E K + K LL W Q K + + NF+ W+ G A A++ P L ++
Sbjct: 164 EEAKKQTPKQRLLGWIQNKLP---QLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWD 220
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTY 271
S + N A A+D LG+ +++ E+I D+ S++TY+ +
Sbjct: 221 ASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDKHSVMTYLSQF 267
>pdb|1DRO|A Chain A, Nmr Structure Of The CytoskeletonSIGNAL TRANSDUCTION Protein
Length = 122
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 2150 SGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYK 2209
+GA H EG + RKHEW++ K+ASNRSWDK++++ + + FYKDQK KS+PE+ ++
Sbjct: 4 TGAGEGH-EGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFR 62
Query: 2210 NETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
E ++L+ + ++A DY+KKKHV RVK NGA +L QA +D EM++WVT+L
Sbjct: 63 GEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSL 114
>pdb|3LUE|K Chain K, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|M Chain M, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|L Chain L, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|O Chain O, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|N Chain N, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|Q Chain Q, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|P Chain P, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|S Chain S, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|R Chain R, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|T Chain T, Model Of Alpha-Actinin Ch1 Bound To F-Actin
Length = 109
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 78/107 (72%)
Query: 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHC 110
E Q+KTF W NSHL + +I ++ D R+G L+ LLEV+SGERLPRP KGKMR H
Sbjct: 3 EKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHK 62
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQI 157
+ NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF I
Sbjct: 63 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI 109
>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|B Chain B, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|C Chain C, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
Length = 213
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 91/145 (62%)
Query: 642 QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVG 701
Q + DM DEE+WIKEK+ +VS+ D G DLT + L KHK LE E+ AHE + SV+ G
Sbjct: 4 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTG 63
Query: 702 DELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWML 761
+L + G + I+ RL + W+ L LAA R +RLEE++++ QF A+ + + W+
Sbjct: 64 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWIN 123
Query: 762 DTVRLVSSEDVGRDEANVQSLLKKH 786
+ + LV+SED G A +Q LLKKH
Sbjct: 124 EKMTLVASEDYGDTLAAIQGLLKKH 148
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%)
Query: 1492 YQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNN 1551
+QF RD++DE+ WI EK S +YG L V L+KK++ L E+ HEP I + +
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 1552 GRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWM 1611
G+KL D+ E + +D W++LK+ R +L +S + QQ++ + E E+W+
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 1612 SEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQ 1671
+E+ + ED G + Q L+KKHE E + D + + L + + +
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVEN 182
Query: 1672 IALKQSQVDKLYAGLKDLAGERRAKLDE 1699
I K + + L+ A +R+AKLDE
Sbjct: 183 ITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
++E K+ + S+DYG+ L GV++L +KH +EA++ ++SV+ ++ D+ T
Sbjct: 16 IKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNT---- 71
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIV 661
I +R+ Q D + EL +LA R RLEES + Q ++ +EE WI EK +V
Sbjct: 72 --IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLV 129
Query: 662 STGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQD 721
++ D G L I LL KH+A E + H+ ++ V A G++L+ + + + I +++
Sbjct: 130 ASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKG 189
Query: 722 TMAMWQNLLDLAAFRRKRLEE 742
+L AA R+ +L+E
Sbjct: 190 LKGKVSDLEKAAAQRKAKLDE 210
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 1387 LIHQTCDDID---SWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQV-SEL 1442
++HQ D+D SW+ E + + +ED G DL V L +K + +E ++A + S L
Sbjct: 1 MVHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVL 60
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEK 1502
+T ++ K EEI + + ++++K+ AR + LE+ E QF ++E+E+
Sbjct: 61 DTGKKLSDDNTIGK-EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEE 119
Query: 1503 LWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHED 1562
WI EK+ S +YG++L + L KK+++ + H+ R+N +C NG LI + +
Sbjct: 120 AWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH 179
Query: 1563 SAEFTSLIEDLMDRWQQLKKAVDERRSKL 1591
T+ ++ L + L+KA +R++KL
Sbjct: 180 VENITAKMKGLKGKVSDLEKAAAQRKAKL 208
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 747 HQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQ 806
HQFF D D + W+ + LVSSED GRD VQ+L KKHK + EL + I+++ +
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 807 ASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWI 865
+L D + E+ +RLA +KEL +LA R QRL ++L + + + + WI
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 866 GEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQ 925
EK ++A+ G + ++ + +++ F+ + + RV V L+ + + E
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVEN 182
Query: 926 IVTRQNQLNHDWAGLREKAEGKR 948
I + L + L EKA +R
Sbjct: 183 ITAKMKGLKGKVSDL-EKAAAQR 204
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 957 VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLE 1016
V F + + SWI++KK +L S++ DLTG+ L+++ +E +LAA + + S+
Sbjct: 2 VHQFFRDMDDEESWIKEKK-LLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVL 60
Query: 1017 AEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQV 1076
+ ++ E I++R+ Q W++L Q+ R +LEE+ + +F+ +++ +
Sbjct: 61 DTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEA 120
Query: 1077 WLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTH 1135
W+ + T VASED +LA + LL +H+A + + + + GE + + + H
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH 179
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
+ +F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q+V+
Sbjct: 1 MVHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVL 60
Query: 481 TVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKAXXXXXXXXXXXXXXXXXXXYILD 540
++L + + I R + W L +L A ++ +
Sbjct: 61 DTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA------RGQRLEESLEYQQFVAN 114
Query: 541 SMEE-----LKMRLL-SDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLD 594
EE KM L+ S+DYG L ++ LL+KH E D V +RV V + +
Sbjct: 115 VEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK 174
Query: 595 EETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
+ + I +++ L+ S+L K A +R+A+L+E+
Sbjct: 175 KNNHH------VENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
Q+ D + ESW+ E++L + ED G+D QNL KKH+ LE + + I+ + +T
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWI 1717
++L+ + ++I + +Q + LK LA R +L+E+L+ V++ E WI
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 1718 AEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSA 1777
E+ + S + G + L ++ + F+ D + +RV V + LI +
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDF-TVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1778 TIAEWKDGLNEAWQDL 1793
I GL DL
Sbjct: 182 NITAKMKGLKGKVSDL 197
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 1280 LHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQ 1338
+HQF +D ++ W++EKK E Y R V + +H+ EAE+A+++ + V
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1339 SGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSW 1398
+G +L + E I +++ + +L+ +G+RL +S ++ ++W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1399 MNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKME 1458
+NE + +ED G LA++ L++K + ET V +V+++ E L K +E
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1459 EIVVKKSAVEQRFEKIKEPLLARQRALE 1486
I K ++ + +++ R+ L+
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLD 209
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 1177 FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFAD 1236
F RD E + +++ ++S ++ +L V+NL K+H+ + A++ I V+
Sbjct: 5 FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGK 64
Query: 1237 RLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQE 1296
+L+D++ ++++++ D K+ A + + L++ L+ QF+ + EE W+ E
Sbjct: 65 KLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINE 124
Query: 1297 KKFTAQDETYR-SAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIG 1355
K E Y + + +H+AFE + +KDR+ V +G +L+K+ E I
Sbjct: 125 KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENIT 184
Query: 1356 PKISDLGQQFDDLETTTKDKGERL 1379
K+ L + DLE + +L
Sbjct: 185 AKMKGLKGKVSDLEKAAAQRKAKL 208
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%)
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
W+ + +++ + RD++GV+ L H+ L+AE+ E + + GK+L N
Sbjct: 15 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGK 74
Query: 1989 NEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMEL 2048
EI+++L + L R + L+ LE QF + EAW+ + + S +
Sbjct: 75 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDY 134
Query: 2049 GLTIDEVENLIKKHEAFEKSAIAQEERFS 2077
G T+ ++ L+KKHEAFE ++R +
Sbjct: 135 GDTLAAIQGLLKKHEAFETDFTVHKDRVN 163
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMD 1123
+H+F RD+D + W+ + + V+SED L + L +H+ + E+ + + ++D
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1124 YGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDAKQ 1183
G+K++ + + + +++RL D W+EL ++ R F + ++
Sbjct: 62 TGKKLSDDNTIGKEE----IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEE 117
Query: 1184 AEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDH 1243
E ++++ +++ ++ L ++ L+K+HEAF T + D++N V + L +++
Sbjct: 118 EEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN 177
Query: 1244 YAADKVKKK 1252
+ + + K
Sbjct: 178 HHVENITAK 186
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 1810 LHKFFHDCKDILGRISEKHHAMSDE-LGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICN 1868
+H+FF D D I EK +S E GRD V L++KH+ + +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1869 ESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLML 1928
KL K +EI R A+ V+ W L+ AR Q+L ++ + +F+ V
Sbjct: 62 TGKKLSDDNTIGK-EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEA 120
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
W+++ + + + + ++ ++ L+ H++ + + +D + G++L+ +N++
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHV 180
Query: 1989 NEIKEKLVGLSNQ 2001
I K+ GL +
Sbjct: 181 ENITAKMKGLKGK 193
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQ 910
+++ F + D + WI EK ++++ G+D+ V+ ++ ++ + E+ A+ + V
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 911 LARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSW 970
++L E+I R Q W L++ A + L + Q F E +W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 971 IEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEA 1030
I +K ++ S D + L I L ++ E D + +++ + A + K++
Sbjct: 122 INEKMTLVASEDYGDT-LAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHV 180
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060
E I ++K ++ L + +R AKL+E
Sbjct: 181 ENITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 1708 REVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQ 1767
R++DD E WI E++++ S + G+D V L ++ K + + A A+ + D
Sbjct: 7 RDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA----HEPAIQSVLD- 61
Query: 1768 LIAAGHSDSATIA--EWKDGLNE---AWQDLLELIETRTQMLVASRELHKFFHDCKDILG 1822
SD TI E + L + W++L +L R Q L S E +F + ++
Sbjct: 62 -TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEA 120
Query: 1823 RISEKHHAM-SDELGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXIC 1867
I+EK + S++ G ++ L +KH+ F +C
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVC 166
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 2022 VYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQE 2073
V+QF RD E+W+ ++ + S + G + V+NL KKH+ E A E
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 53
>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats
15 And 16. Northeast Structural Genomics Consortium
Target Hr5563a.
pdb|3FB2|B Chain B, Crystal Structure Of The Human Brain Alpha Spectrin Repeats
15 And 16. Northeast Structural Genomics Consortium
Target Hr5563a
Length = 218
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%)
Query: 1916 LFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACIS 1975
L +FL R L W++ + +++ E A+DV+G E L+ HQ + EID R F A
Sbjct: 15 LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 1976 LGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAW 2035
G++LL+ HYAS EIK+KL L +R L W +R L LE+ F RD AE W
Sbjct: 75 FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENW 134
Query: 2036 LIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALE 2080
A+E +L + + G ++D VE LIKKHE F+K+ QEE+ +AL+
Sbjct: 135 XAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQ 179
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMD 1123
L RFL D W+ + V+S++ + AE LL +HQ R EID ++
Sbjct: 15 LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 1124 YGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRXXXXXXXXXXXMFNRDAKQ 1183
+G+++ A + P+ ++++L L +L K W R +F+RD +Q
Sbjct: 75 FGQQLLAH-GHYASPE---IKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQ 130
Query: 1184 AEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDH 1243
AE + +E L+ ++ +L+ VE LIK+HE F + ++KI + FAD+L H
Sbjct: 131 AENWXAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGH 190
Query: 1244 YAADKVKKKADNINDR 1259
YA + + + + DR
Sbjct: 191 YAKGDISSRRNEVLDR 206
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 2/204 (0%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
Q++L D + SW++ + ++ KD + L+++H+ ++ A T + +
Sbjct: 16 QRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQF 75
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWI 1717
+QL + H S +I K +D+ A L+ +RR LD+ L+L + +R+ + E W
Sbjct: 76 GQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWX 135
Query: 1718 AEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSA 1777
A RE + + G D V L ++ ++FD+ + E++AA+ ADQLIAAGH
Sbjct: 136 AAREAFLNTEDKGDSLDSVEALIKKHEDFDKAIN-VQEEKIAALQAFADQLIAAGHYAKG 194
Query: 1778 TIAEWKDGLNEAWQDL-LELIETR 1800
I+ ++ + + W+ L + IE R
Sbjct: 195 DISSRRNEVLDRWRRLKAQXIEKR 218
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 746 FHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRN 805
+F +D D+ W+ LVSS+++ +D ++LL++H++ E+ A T +A
Sbjct: 15 LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 806 QASQL-GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQW 864
QL SPE+ ++L ++ +L + R+ L L L + + + W
Sbjct: 75 FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENW 134
Query: 865 IGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSE 924
++ L T G ++ VE + +++ FDK +N ++A + A QL+ H
Sbjct: 135 XAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKG 194
Query: 925 QIVTRQNQLNHDWAGLREKAEGKR 948
I +R+N++ W L+ + KR
Sbjct: 195 DISSRRNEVLDRWRRLKAQXIEKR 218
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%)
Query: 1394 DIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTV 1453
D+ SW+N + + +++ D+ L+++ Q T++ +A E + L
Sbjct: 24 DLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHG 83
Query: 1454 PDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAK 1513
EI K ++Q +++ + R+ L++ E F RD E + W A +
Sbjct: 84 HYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXAAREAFLN 143
Query: 1514 STEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDL 1573
+ + G+SL +V L KK++ K I+ E +I + +LI GH + +S ++
Sbjct: 144 TEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEV 203
Query: 1574 MDRWQQLKKAVDERR 1588
+DRW++LK E+R
Sbjct: 204 LDRWRRLKAQXIEKR 218
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%)
Query: 1493 QFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNG 1552
+F D D WI S E + L +++Q EID G
Sbjct: 17 RFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFG 76
Query: 1553 RKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMS 1612
++L+ GH S E ++ L L+KA +RR L Q + Q + D +AE+W +
Sbjct: 77 QQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXA 136
Query: 1613 EQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQI 1672
+E ++ ED+G S + L+KKHE + A+ + I L A QL + H I
Sbjct: 137 AREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDI 196
Query: 1673 ALKQSQV 1679
+ ++++V
Sbjct: 197 SSRRNEV 203
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 551 SDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIV 610
SD+ K + G E LL++H +I+ ++ Q Q+ L P I
Sbjct: 38 SDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHG-----HYASPEI-K 91
Query: 611 ERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDL 670
+++ L+ ++L K V+RR L++ +L + D ENW +E ++T D G L
Sbjct: 92 QKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXAAREAFLNTEDKGDSL 151
Query: 671 TTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNL 729
++ L+ KH+ + I E ++ ++ A D+L+ H+ I R + + W+ L
Sbjct: 152 DSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRL 210
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 646 DMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELV 705
D D +WI +VS+ ++ D+T LL +H+ EI A + G +L+
Sbjct: 21 DFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLL 80
Query: 706 NQQHFGADRIRGRLQDTMAMWQNLLDLAAF-RRKRLEEAVDFHQFFADAVDVDIWMLDTV 764
H+ + I+ +L D + + L+ A RR L++ ++ F D + W
Sbjct: 81 AHGHYASPEIKQKL-DILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXAARE 139
Query: 765 RLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL--------GDQDKE 816
+++ED G +V++L+KKH+D + + I AL+ A QL GD
Sbjct: 140 AFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSR 199
Query: 817 SPEVLER 823
EVL+R
Sbjct: 200 RNEVLDR 206
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 1280 LHQFLQDCEELGEWVQE-KKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQ 1338
L +FL D +L W+ + + DE + + RHQ EI + +Q
Sbjct: 15 LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 1339 SGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSW 1398
G +L+ + I K+ L Q+ DLE + L L H+ C+ ++W
Sbjct: 75 FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENW 134
Query: 1399 MNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKME 1458
E + ED G L SV L++K + + + V+ ++++ L+ A+ L
Sbjct: 135 XAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKG 194
Query: 1459 EIVVKKSAVEQRFEKIK 1475
+I +++ V R+ ++K
Sbjct: 195 DISSRRNEVLDRWRRLK 211
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
++S DE ++ E L++RH+ T ++A QF +L HYA+ ++K+K
Sbjct: 35 LVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKL 94
Query: 1254 DNINDRRNANKERAHQQMETLKDQ-LQLHQFLQDCEELGEWVQEKK-FTAQDETYRSAKT 1311
D I D+ A+ E+A Q DQ L+L F +DCE+ W ++ F ++ S +
Sbjct: 95 D-ILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXAAREAFLNTEDKGDSLDS 153
Query: 1312 VHSKWTRHQAFEAEIASNKDRLLRVQQSGSELM 1344
V + +H+ F+ I ++++ +Q +L+
Sbjct: 154 VEALIKKHEDFDKAINVQEEKIAALQAFADQLI 186
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQ 910
L + S+ + WI ++++ KD+ E + R+ E++A A Q
Sbjct: 15 LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 911 LARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSW 970
+QLL H S +I + + L+ + A L + +R L+ +Q FH +C + +W
Sbjct: 75 FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENW 134
Query: 971 IEDKKRILQ------STDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
++ L S DS+E + + ++ E +AA+QA D L A
Sbjct: 135 XAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIA 187
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 425 FNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQ 484
F+R E W + + ++ ++ G L +VEA KKHE + I EE++ A+ +
Sbjct: 124 FHRDCEQAENWXAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFAD 183
Query: 485 ELEAEKYHDIDRINARKENVLRLWNYL 511
+L A ++ I++R+ VL W L
Sbjct: 184 QLIAAGHYAKGDISSRRNEVLDRWRRL 210
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 1712 DLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEA-IGTERVAAVNGIADQLIA 1770
DL WI + S EL +D L ER +E + +A GT A QL+A
Sbjct: 24 DLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGT--FQAFEQFGQQLLA 81
Query: 1771 AGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHA 1830
GH S I + D L++ DL + R L EL F DC+ + +
Sbjct: 82 HGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENWXAAREAF 141
Query: 1831 MSDE-LGRDAGSVNTLQRKHQNFXXXXXXXXXXXXXICNESAKLQASYAGEKAK-EITNR 1888
++ E G SV L +KH++F + + +L A AG AK +I++R
Sbjct: 142 LNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIA--AGHYAKGDISSR 199
Query: 1889 EAEVVNAWASLQ 1900
EV++ W L+
Sbjct: 200 RNEVLDRWRRLK 211
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 957 VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLE 1016
+Q F + R+ SWI + R L S+D L D+TG L R ++ A + E
Sbjct: 15 LQRFLSDFRDLXSWI-NGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFE 73
Query: 1017 AEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQV 1076
+ + I++++ + L + +R L++ +L F RD + +
Sbjct: 74 QFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAEN 133
Query: 1077 WLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTA 1130
W + + +ED SL E L+ +H+ + I+ E + + +++ A
Sbjct: 134 WXAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIA 187
>pdb|1BTN|A Chain A, Structure Of The Binding Site For Inositol Phosphates In A
Ph Domain
pdb|1MPH|A Chain A, Pleckstrin Homology Domain From Mouse Beta-Spectrin, Nmr, 50
Structures
Length = 106
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
MEG L RKHEWEA K+AS+RSW ++ + + FYKD KSA S I Y +E P L
Sbjct: 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASG--IPYHSEVPVSL 58
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
+ +VA DY KKKHVF+++ +G EYLFQAK+DEEMN W+ A+S+
Sbjct: 59 KEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106
>pdb|1BHD|A Chain A, Second Calponin Homology Domain From Utrophin
pdb|1BHD|B Chain B, Second Calponin Homology Domain From Utrophin
Length = 118
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 165 TDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS 224
+D Q+T S K LL W + T Y VNV NFTTSW DGLAFNA++H+H+PDL ++K+
Sbjct: 2 SDLQQTNSEK-ILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVV 60
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
K + I L +AF+ A+ LG+ KLLD ED+ V PD+KSII Y+ + +
Sbjct: 61 KMSPIERLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIMYLTSLF 108
>pdb|1WJM|A Chain A, Solution Structure Of Pleckstrin Homology Domain Of Human
Beta Iii Spectrin
Length = 123
Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/127 (44%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYY 2208
+SG+ + MEG L RK E EA K+A+NRSW ++ LR L FYKD K+A S + Y
Sbjct: 2 SSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAA--SAGVPY 59
Query: 2209 KNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268
E P L VA DY K+KHVF++ +G EYLFQAK++ EM+ W+ V
Sbjct: 60 HGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWL----RVVNAA 115
Query: 2269 ASGGPSS 2275
+ GPSS
Sbjct: 116 IASGPSS 122
>pdb|2E9K|A Chain A, Solution Structure Of The Ch Domain From Human Mical-2
Length = 121
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 177 LLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAF 236
LL WCQ +T GY +VNV + TTSWR GLA AIIH+ RP+LI F+ L++ +A+ N AF
Sbjct: 14 LLTWCQQQTEGYQHVNVTDLTTSWRSGLALCAIIHRFRPELINFDSLNEDDAVENNQLAF 73
Query: 237 TVAEDKLGLTKLLDAEDIFVEQ-PDEKSIITYVVTYYHYF 275
VAE + G+ + +++ Q PD+ S++ Y+ +Y F
Sbjct: 74 DVAEREFGIPPVTTGKEMASAQEPDKLSMVMYLSKFYELF 113
>pdb|2D88|A Chain A, Solution Structure Of The Ch Domain From Human Mical-3
Protein
Length = 121
Score = 92.0 bits (227), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 177 LLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAF 236
LL WCQ +T GY VNV + T SW+ GLA AIIH++RPDLI F+ L + N N AF
Sbjct: 14 LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAF 73
Query: 237 TVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYF 275
+AE +LG++ ++ +++ V +PD+ S++ Y+ +Y F
Sbjct: 74 DIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 113
>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20
Structures
Length = 110
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%)
Query: 632 ARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHE 691
A+L ES +L Q + DM DEE+WIKEK+ +VS+ D G DLT + L KHK LE E+ AHE
Sbjct: 1 AKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 60
Query: 692 SQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLE 741
+ V+ G +L + G + I+ RL + W+ L LAA R +RLE
Sbjct: 61 PAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE 110
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 739 RLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYAS 798
+L E+ HQFF D D + W+ + LVSSED GRD VQ+L KKHK + EL +
Sbjct: 2 KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 61
Query: 799 TIEALRNQASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRKQRL 845
I+ + + +L D + E+ +RLA +KEL +LA R QRL
Sbjct: 62 AIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL 109
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 1492 YQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNN 1551
+QF RD++DE+ WI EK S +YG L V L+KK++ L E+ HEP I + +
Sbjct: 10 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDT 69
Query: 1552 GRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKL 1591
G+KL D+ E + +D W++LK+ R +L
Sbjct: 70 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL 109
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 1589 SKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYA 1648
+KL +S + Q+ D + ESW+ E++L + ED G+D QNL KKH+ LE + +
Sbjct: 1 AKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 60
Query: 1649 DTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLD 1698
I+ + +T ++L+ + ++I + +Q + LK LA R +L+
Sbjct: 61 PAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE 110
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 1056 AKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYT 1115
AKL E+ LH+F RD+D + W+ + + V+SED L + L +H+ + E+ +
Sbjct: 1 AKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 60
Query: 1116 EDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKM 1160
+ ++D G+K++ + + + +++RL D W+EL ++
Sbjct: 61 PAIQGVLDTGKKLSDDNTIGKEE----IQQRLAQFVDHWKELKQL 101
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
+F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q V+
Sbjct: 11 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTG 70
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKA 517
++L + + I R + W L +L A
Sbjct: 71 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA 104
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 951 LNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQA 1010
LN +H + F + + SWI++KK +L S++ DLTG+ L+++ +E +LAA +
Sbjct: 3 LNESHRLHQFFRDMDDEESWIKEKK-LLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 61
Query: 1011 KLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLE 1059
+ + + ++ E I++R+ Q W++L Q+ R +LE
Sbjct: 62 AIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE 110
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
++E K+ + S+DYG+ L GV++L +KH +EA++ ++ V+ ++ D+ T
Sbjct: 23 IKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT---- 78
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLE 635
I +R+ Q D + EL +LA R RLE
Sbjct: 79 --IGKEEIQQRLAQFVDHWKELKQLAAARGQRLE 110
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 1804 LVASRELHKFFHDCKDILGRISEKHHAMSDE-LGRDAGSVNTLQRKHQNFXXXXXXXXXX 1862
L S LH+FF D D I EK +S E GRD V L++KH+
Sbjct: 3 LNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPA 62
Query: 1863 XXXICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKL 1910
+ + KL K +EI R A+ V+ W L+ AR Q+L
Sbjct: 63 IQGVLDTGKKLSDDNTIGK-EEIQQRLAQFVDHWKELKQLAAARGQRL 109
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 1274 LKDQLQLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDR 1332
L + +LHQF +D ++ W++EKK E Y R V + +H+ EAE+A+++
Sbjct: 3 LNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPA 62
Query: 1333 LLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERL 1379
+ V +G +L + E I +++ + +L+ +G+RL
Sbjct: 63 IQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL 109
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 1695 AKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIG 1754
AKL+E+ +L R++DD E WI E++++ S + G+D V L ++ K + + A
Sbjct: 1 AKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA-- 58
Query: 1755 TERVAAVNGIADQLIAAGHSDSATIA--EWKDGLNE---AWQDLLELIETRTQML 1804
A+ G+ D SD TI E + L + W++L +L R Q L
Sbjct: 59 --HEPAIQGVLD--TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL 109
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 1909 KLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTRED 1968
KL ++ L +F + W+ + +++ + RD++GV+ L H+ L+AE+ E
Sbjct: 2 KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 61
Query: 1969 NFTACISLGKELLSRNHYASNEIKEKLV 1996
+ GK+L N EI+++L
Sbjct: 62 AIQGVLDTGKKLSDDNTIGKEEIQQRLA 89
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 1378 RLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAV 1434
+L +S+R + DD +SW+ E + + +ED G DL V L +K + +E ++A
Sbjct: 2 KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA 58
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 844 RLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANAS 903
+L ++ L++ F + D + WI EK ++++ G+D+ V+ ++ ++ + E+ A+
Sbjct: 2 KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 61
Query: 904 RVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLRE--KAEGKR 948
+ V ++L E+I R Q W L++ A G+R
Sbjct: 62 AIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQR 108
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 43/76 (56%)
Query: 1177 FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFAD 1236
F RD E + +++ ++S ++ +L V+NL K+H+ + A++ I GV+
Sbjct: 12 FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGK 71
Query: 1237 RLNDEDHYAADKVKKK 1252
+L+D++ ++++++
Sbjct: 72 KLSDDNTIGKEEIQQR 87
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 2022 VYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQE 2073
++QF RD E+W+ ++ + S + G + V+NL KKH+ E A E
Sbjct: 9 LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE 60
>pdb|2D87|A Chain A, Solution Structure Of The Ch Domain From Human Smoothelin
Splice Isoform L2
Length = 128
Score = 85.5 bits (210), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 174 KDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLN 233
K LL WC+ KT GY +V+++NF++SW DG+AF A++H P+ + +LS N N
Sbjct: 9 KQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFE 68
Query: 234 NAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYY 272
AF+ AE +LLD ED+ + +PD K + TY+ +Y
Sbjct: 69 VAFSSAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFY 108
>pdb|2D89|A Chain A, Solution Structure Of The Ch Domain From Human Eh Domain
Binding Protein 1
Length = 119
Score = 81.6 bits (200), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 172 SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYN 231
+A +LL+WC+ T Y V + NFTTSWR+GL+F AI+H RPDLI ++ L+ + N
Sbjct: 9 NASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKEN 68
Query: 232 LNNAFTVAEDKLGLTKLLDAED-IFVEQPDEKSIITYVVTYYHYFS 276
A+ +G+++LL+ D + + PD+ +++TY+ +FS
Sbjct: 69 NKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHFS 113
>pdb|2JV9|A Chain A, The Solution Structure Of Calponin Homology Domain From
Smoothelin-Like 1
pdb|2K3S|A Chain A, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
Length = 119
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 172 SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYN 231
+K+ LL WC+ T Y +V+++NF++SW G+AF A+IHK P+ + +L + +N
Sbjct: 4 GSKNMLLEWCRAMTRNYEHVDIQNFSSSWSSGMAFCALIHKFFPEAFDYAELDPAKRRHN 63
Query: 232 LNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYY 272
AF+ AE +LL+ +D+ + PD K + TY+ Y
Sbjct: 64 FTLAFSTAEKLADCAQLLEVDDMVRLAVPDSKCVYTYIQELY 105
>pdb|2DK9|A Chain A, Solution Structure Of Calponin Homology Domain Of Human
Mical-1
Length = 118
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 170 TKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAI 229
+ ++ LL WCQ +TAGY V+V + ++SW DGLA A++++ +P L++ +L A+
Sbjct: 11 SAGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGAL 70
Query: 230 YNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
A VAE++LG+T ++ A+ + V D +I Y+ ++ F M
Sbjct: 71 EATAWALKVAENELGITPVVSAQAV-VAGSDPLGLIAYLSHFHSAFKSM 118
>pdb|1WYL|A Chain A, Solution Structure Of The Ch Domain Of Human Nedd9
Interacting Protein With Calponin Homology And Lim
Domains
Length = 116
Score = 70.1 bits (170), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 170 TKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAI 229
+ ++ LL WCQ +TAGY V+V + ++SW DGLA A++++ +P L++ +L A+
Sbjct: 5 SSGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGAL 64
Query: 230 YNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYF 275
A VAE++LG+T ++ A+ + V D +I Y+ ++ F
Sbjct: 65 EATAWALKVAENELGITPVVSAQAV-VAGSDPLGLIAYLSHFHSAF 109
>pdb|3F31|A Chain A, Crystal Structure Of The N-Terminal Region Of Alphaii-Spectr
Tetramerization Domain
pdb|3F31|B Chain B, Crystal Structure Of The N-Terminal Region Of Alphaii-Spectr
Tetramerization Domain
Length = 149
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 1248 KVKKKADNINDRRNANKERAHQ-------QMETLKDQLQLHQFLQDCEELGEWVQEKKFT 1300
KV + A++I +RR +R H+ + + L+D + F +D EEL +W+QEK
Sbjct: 9 KVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQI 68
Query: 1301 AQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISD 1360
A DE Y+ + K +HQAFEAE+ +N ++++ ++G+ ++ E +E I ++ +
Sbjct: 69 ASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLME 128
Query: 1361 LGQQFDDLETTTKDKGERLF 1380
L +Q++ L ++KG +L
Sbjct: 129 LHRQWELLLEKMREKGIKLL 148
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 609 IVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGH 668
I ER QQ+ D Y +L+ RR +LE+S + D + E WI+EK QI S +
Sbjct: 17 IQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENY-K 75
Query: 669 DLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQN 728
D T + L KH+A E E+QA+ ++ + G+ ++++ HF ++ IR RL + W+
Sbjct: 76 DPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWEL 135
Query: 729 LLD 731
LL+
Sbjct: 136 LLE 138
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1571 EDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEIST 1630
+ ++DR+ + K+ RR KL S + Q + DA E E W+ E+ L + ++ KD +
Sbjct: 22 QQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEK-LQIASDENYKDPTNL 80
Query: 1631 QNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQI 1672
Q ++KH+ E V+ + I +L ET + SE H S+ I
Sbjct: 81 QGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI 122
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 1453 VPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSA 1512
V + E+I ++ V R+ + KE R++ LE F+RD E+ + WI EKL A
Sbjct: 10 VLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIA 69
Query: 1513 KSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIED 1572
Y + N+ +K+Q+ E+ + I + G +I EGH S + + +
Sbjct: 70 SDENYKDPT-NLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLME 128
Query: 1573 LMDRWQQLKKAVDERRSKLIQ 1593
L +W+ L + + E+ KL+Q
Sbjct: 129 LHRQWELLLEKMREKGIKLLQ 149
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 817 SPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMV 876
+ ++ ER + RY EL+ LR+Q+L D+ +A+ +++WI EK + +A+
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQ-IASDE 72
Query: 877 PGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHD 936
KD +++ ++ F+ E+ AN+ + +++ ++ H SE I TR +L+
Sbjct: 73 NYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQ 132
Query: 937 WAGLREK 943
W L EK
Sbjct: 133 WELLLEK 139
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 1880 EKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVR---TLMLWMDDVVRQ 1936
E A++I R +V++ + + R+QKL D+ ++F R L W+ + + Q
Sbjct: 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDS---YRFQFFQRDAEELEKWIQEKL-Q 67
Query: 1937 MNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLV 1996
+ + E +D + ++ + HQ+ +AE+ G ++S H+AS I+ +L+
Sbjct: 68 IASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLM 127
Query: 1997 GLSNQRNALLHRWEER 2012
L Q LL + E+
Sbjct: 128 ELHRQWELLLEKMREK 143
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 712 ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSED 771
A+ I+ R Q + + +L+ RR++LE++ F F DA +++ W+ + +++ S E+
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN 73
Query: 772 VGRDEANVQSLLKKHKDVTEELKNYASTIEAL 803
+D N+Q L+KH+ E++ + I L
Sbjct: 74 Y-KDPTNLQGKLQKHQAFEAEVQANSGAIVKL 104
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1669 SDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHE 1728
++ I ++ QV Y K+L+ RR KL+++ + R+ ++LE+WI E+ +A S E
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIA-SDE 72
Query: 1729 LGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNE 1788
+D ++ ++ + F+ + +A + + ++ + +I+ GH S TI L+
Sbjct: 73 NYKDPTNLQGKLQKHQAFEAEVQA-NSGAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 1789 AWQDLLE 1795
W+ LLE
Sbjct: 132 QWELLLE 138
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVAS 1087
E AE I+ER +Q+ + + ++ R KLE++ F RD + + W+ + + +AS
Sbjct: 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI-QEKLQIAS 70
Query: 1088 EDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERL 1147
++ + + L +HQA E+ + K+ + G + +E + +R RL
Sbjct: 71 DENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASET----IRTRL 126
Query: 1148 KALRDGWEELHKMWE 1162
ELH+ WE
Sbjct: 127 M-------ELHRQWE 134
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 1176 MFNRDAKQAEVLLSQQEHVLSKD--ETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQ 1233
F RDA++ E + ++ + S + + P NL+ +++H+AF ++AN I + +
Sbjct: 50 FFQRDAEELEKWIQEKLQIASDENYKDPTNLQ---GKLQKHQAFEAEVQANSGAIVKLDE 106
Query: 1234 FADRLNDEDHYAADKVKKK 1252
+ + E H+A++ ++ +
Sbjct: 107 TGNLMISEGHFASETIRTR 125
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 304 EYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVL 363
+Y ++L++WI + ASL R F +S+ VQ + Y+ EKPPK E LE +
Sbjct: 762 DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAI 821
Query: 364 LFTLQSKMRANNQKPYTPKEGKMISDINKAWXXXXXXXXXXXXXXXXXXXXXXKLEQLAA 423
+LQ+K+R ++P+ G ++I+ W K+ L
Sbjct: 822 YNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQ 881
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQA-VVTV 482
++NR E W + + + G + AV+A K EA + + + E + + ++++
Sbjct: 882 KYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSI 941
Query: 483 SQELEAEKYHDIDRINARKENVL 505
+L Y+ + + RK+
Sbjct: 942 LAQLTELNYNGVPELTERKDTFF 964
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 19/240 (7%)
Query: 1585 DERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKH-ETLELA 1643
+ER S+ +S+ YL A+E W+++++ + D G S Q+ M H E +
Sbjct: 752 EERASEQTKSD----YLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE 807
Query: 1644 VEDYADTIRQLGETARQLTSEMH-----PESDQIALKQSQVDKLYAGLKDLAGER----R 1694
+ +L L +++ P L +++D ++ L+ E R
Sbjct: 808 KPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALR 867
Query: 1695 AKLDEALKLFML----NREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDT 1750
+L K+ +L NR + LE W + V GS+E G V + + FD +
Sbjct: 868 IELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGEC 927
Query: 1751 EAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDG-LNEAWQDLLELIETRTQMLVASRE 1809
+++ + + + I QL ++ + E KD + W + ET L+A E
Sbjct: 928 QSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELE 987
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 304 EYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVL 363
+Y ++L++WI + ASL R F +S+ VQ + Y+ EKPPK E LE +
Sbjct: 770 DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAI 829
Query: 364 LFTLQSKMRANNQKPYTPKEGKMISDINKAWXXXXXXXXXXXXXXXXXXXXXXKLEQLAA 423
+LQ+K+R ++P+ G ++I+ W K+ L
Sbjct: 830 YNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQ 889
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQA-VVTV 482
++NR E W + + + G + AV+A K EA + + + E + + ++++
Sbjct: 890 KYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSI 949
Query: 483 SQELEAEKYHDIDRINARKENVL 505
+L Y+ + + RK+
Sbjct: 950 LAQLTELNYNGVPELTERKDTFF 972
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 15/263 (5%)
Query: 1562 DSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVE 1621
D ++ I + R QL + + R +L + YL A+E W+++++ +
Sbjct: 733 DPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESR 792
Query: 1622 DRGKDEISTQNLMKKH-ETLELAVEDYADTIRQLGETARQLTSEMH-----PESDQIALK 1675
D G S Q+ M H E + + +L L +++ P L
Sbjct: 793 DFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLT 852
Query: 1676 QSQVDKLYAGLKDLAGER----RAKLDEALKLFML----NREVDDLEQWIAEREVVAGSH 1727
+++D ++ L+ E R +L K+ +L NR + LE W + V GS+
Sbjct: 853 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSN 912
Query: 1728 ELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDG-L 1786
E G V + + FD + +++ + + + I QL ++ + E KD
Sbjct: 913 ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFF 972
Query: 1787 NEAWQDLLELIETRTQMLVASRE 1809
+ W + ET L+A E
Sbjct: 973 AQQWTGVKSSAETYKNTLLAELE 995
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 1904 DARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLK--- 1960
+AR+Q+LG +L L+ W++D + + + + V+ MN H+ K
Sbjct: 756 EAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE 815
Query: 1961 --------AEIDTREDNFTACISLGK--ELLSRNHYASNEIKEKLVGL--SNQRNALLHR 2008
+E++ ++ + L K ++ NEI L + Q +A R
Sbjct: 816 KPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALR 875
Query: 2009 WE-ERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFE 2066
E +R + + ++L+ Y R E W + YL S E G +I V+ +K EAF+
Sbjct: 876 IELKRQKKIAVLLQKYN--RILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFD 932
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 824 LASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIED 883
+ I FR +L + + R+QRL + A+ + QWI +K L + G IE
Sbjct: 741 ITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIES 800
Query: 884 VEIMKHRYDGFDK-EMNANASRV----AVVNQLARQLLHVEH-PNSEQIVTRQNQLNHDW 937
V+ + + + K E V A+ N L +L ++ P N+++ W
Sbjct: 801 VQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTW 860
Query: 938 AGL----REKAEGKRDELNSAHGV----QTFHIECRETVSWIEDKKRILQSTDSLEMDLT 989
+ L +E AE R EL + Q ++ ++ +W K L S ++ +
Sbjct: 861 SALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGD---- 916
Query: 990 GIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
+ A+QAKL +LEA
Sbjct: 917 --------------SITAVQAKLKNLEA 930
>pdb|1QUU|A Chain A, Crystal Structure Of Two Central Spectrin-Like Repeats
From Alpha-Actinin
Length = 250
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 417 KLEQLAARFNRKASMRETW-LSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEER 475
+LE LA +F +KAS ETW + Q L+ +D L V A +KHEA E+D+ A+++R
Sbjct: 11 RLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDR 70
Query: 476 VQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYL 511
V+ + ++QEL YHD +N R + + W+ L
Sbjct: 71 VEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRL 106
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 651 ENWIKEKEQIVSTGDI-GHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQH 709
E W KEQI+ D LT + LL KH+A E ++ AH+ ++ + A+ EL +
Sbjct: 27 ETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDY 86
Query: 710 FGADRIRGRLQDTMAMWQNLLDLAAFRRKRLE------EAVD-FHQFFAD-AVDVDIWML 761
A + R Q W L L RR+ LE E +D H FA A + WM
Sbjct: 87 HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWME 146
Query: 762 DTVRLVSSEDVGRDEANVQSLLKKHK 787
+ + + +QSL+ H+
Sbjct: 147 GAMEDLQDMFIVHSIEEIQSLITAHE 172
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
+L KD +L +V L+++HEAF + + A+ D++ + A LN+ D++ A V +
Sbjct: 37 LLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRC 96
Query: 1254 DNIND----------RRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQD 1303
I D +R ER + +ET+ DQL L +F + W++ QD
Sbjct: 97 QKICDQWDRLGTLTQKRREALERMEKLLETI-DQLHL-EFAKRAAPFNNWMEGAMEDLQD 154
Query: 1304 E-TYRSAKTVHSKWTRHQAFEAEI 1326
S + + S T H+ F+A +
Sbjct: 155 MFIVHSIEEIQSLITAHEQFKATL 178
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 549 LLSDDY-GKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPA 607
LL DY L V LL+KH E+D+ +RV+ + +Q E NE D
Sbjct: 37 LLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQ-----ELNE-LDYHDAV 90
Query: 608 IIVERVQQLEDAYSELVKLAVERRARLEESRKLW----QLYWDMADE----ENWIKEKEQ 659
+ +R Q++ D + L L +RR LE KL QL+ + A NW++ +
Sbjct: 91 NVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAME 150
Query: 660 IVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDEL 704
+ I H + I L++ H+ + + + + S++A+ +E+
Sbjct: 151 DLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEV 195
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 955 HGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDS 1014
H + F + +W K++IL D LT + L R+ E DLAA Q +++
Sbjct: 14 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 73
Query: 1015 LEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKER-------DAKLEEAGDLH-R 1066
+ A A + + +A + +R ++I W++L + ++R + LE LH
Sbjct: 74 IAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLE 133
Query: 1067 FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIR 1108
F + F W+ D+ S+ + + L+ H+ +
Sbjct: 134 FAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFK 175
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 1946 VSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEK----------L 1995
++ V L+ H++ ++++ +D ++ +EL +++ + + ++ L
Sbjct: 47 LTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRL 106
Query: 1996 VGLSNQRNALLHRWEERWENL-QLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDE 2054
L+ +R L R E+ E + QL LE FA+ AA W+ L M + +I+E
Sbjct: 107 GTLTQKRREALERMEKLLETIDQLHLE---FAKRAAPFNNWMEGAMEDLQDMFIVHSIEE 163
Query: 2055 VENLIKKHEAFEKS 2068
+++LI HE F+ +
Sbjct: 164 IQSLITAHEQFKAT 177
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 2012 RWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMEL-GLTIDEVENLIKKHEAFEKSAI 2070
R E L+ + E +F + A+ E W +E L+ + ++ EV L++KHEAFE
Sbjct: 8 RLERLEHLAE--KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLA 65
Query: 2071 AQEER 2075
A ++R
Sbjct: 66 AHQDR 70
>pdb|1PXY|A Chain A, Crystal Structure Of The Actin-Crosslinking Core Of
Arabidopsis Fimbrin
pdb|1PXY|B Chain B, Crystal Structure Of The Actin-Crosslinking Core Of
Arabidopsis Fimbrin
Length = 506
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 56 KTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMRIHC 110
+ ++ W+NS + + + +++ D+R+G +LL++L+ +S + +P KM
Sbjct: 279 RCYRLWINS--LGIDSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPI-KMPFRK 335
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+EN ++ ++ ++ + L N+ +DIV GN +L LGL+W ++RF + +
Sbjct: 336 VENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGLLWQ-LMRFHMLQLLKSLRSRTLG 394
Query: 171 KSAKDA-LLLWC--QMKTAGYHNVNVRNFT-TSWRDGLAFNAIIHKHRPDLIQFEKLSK- 225
K DA +L W +++T G + + +F S GL F ++ P ++ + ++K
Sbjct: 395 KEMTDADILSWANRKVRTMG-RKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKG 453
Query: 226 -SNAIYNLNNAFTVA-EDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
++ LN + V+ KLG + L EDI I+T + Y+
Sbjct: 454 ETDDEKRLNATYIVSVARKLGCSVFLLPEDIVEVNQKMILILTASIMYW 502
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 76 LYVDLRDGKMLLKLLEV-LSGERLPRPTKGKMRIHCLE---NVDKALQFLREQRVHLENM 131
LY ++DG +L KL+ V + G R K ++ E N L + + N+
Sbjct: 39 LYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVGCSVVNI 98
Query: 132 GSHDIVDGNPRLSLGLIWTIILRFQIQDITIEET--------DNQETK-----SAKDALL 178
G+ D+ +G P L LGLI +I + D+ +++T D+ + + + LL
Sbjct: 99 GTQDLAEGRPHLVLGLISQLIKIQLLADLNLKKTPQLVELLEDSDDVEELLRLPPEKVLL 158
Query: 179 LWC--QMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPD 216
W +K GY V NF+ +D A+ +++ P+
Sbjct: 159 KWMNFHLKKGGYKK-TVSNFSADLKDAQAYAFLLNVLAPE 197
>pdb|1RT8|A Chain A, Crystal Structure Of The Actin-Crosslinking Core Of
Schizosaccharomyces Pombe Fimbrin
Length = 513
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 49 ERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL------PRPT 102
ERE+ + F W+NS + V+ I D + +LRDG +LL+ + ++ + P
Sbjct: 284 EREA---RVFTLWLNS--LDVTPSIHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPA 338
Query: 103 KG--KMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDI 160
G MR +EN + A+ + Q L + DI DG+ L+L L+W ++R I
Sbjct: 339 SGDEMMRFKAVENCNYAVDLGKNQGFSLVGIQGADITDGSRTLTLALVWQ-MMRMNITKT 397
Query: 161 TIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNF-TTSWRDGLAFNAIIHKHRPDLIQ 219
+ +T S D + M G +R+F S G+ ++H + + +
Sbjct: 398 LHSLSRGGKTLSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVD 457
Query: 220 FEKLSKSN----AIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQP 259
+ ++ + AI N A ++A KLG + EDI +P
Sbjct: 458 YNLVTDGSTEELAIQNARLAISIAR-KLGAVIFILPEDIVAVRP 500
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 39/211 (18%)
Query: 54 QKKTFQKWVNSHL---------VRVSCRIGDLYVDLRDGKMLLKLLE----------VLS 94
+++ F K +NS L V ++ + + +DG +L KL+ VL+
Sbjct: 13 ERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLN 72
Query: 95 GERLPRPTKGKMRIHCLENVDKALQFLREQR-VHLENMGSHDIVDGNPRLSLGLIWTIIL 153
+R +P C+EN + + + + + N+G+ DI++G L LGL+W II
Sbjct: 73 KQRNNKPLD---NFKCIENNNVVINSAKAMGGISITNIGAGDILEGREHLILGLVWQIIR 129
Query: 154 RFQIQ--DITI----------EETDNQETKSAKDALLL-WC--QMKTAGYHNVNVRNFTT 198
R + DIT+ +ET +Q + + +LL W +K A + V NF+
Sbjct: 130 RGLLGKIDITLHPELYRLLEEDETLDQFLRLPPEKILLRWFNYHLKAANWPRT-VSNFSK 188
Query: 199 SWRDGLAFNAIIHKHRPDLIQFEKLSKSNAI 229
DG + ++++ P+L L ++ +
Sbjct: 189 DVSDGENYTVLLNQLAPELCSRAPLQTTDVL 219
>pdb|3BYH|B Chain B, Model Of Actin-Fimbrin Abd2 Complex
Length = 231
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 56 KTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL-----PRPTKGKMRIHC 110
+ ++ W+NS + + + +++ D+R+G +LL++L+ +S + +P KM
Sbjct: 9 RCYRLWINS--LGIDSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPI-KMPFRK 65
Query: 111 LENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQET 170
+EN ++ ++ ++ + L N+ +DIV GN +L LGL+W ++RF + ++ + +
Sbjct: 66 VENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGLLWQ-LMRFHM----LQLLKSLRS 120
Query: 171 KSAKDALLLWC--QMKTAGYHNVNVRNFT-TSWRDGLAFNAIIHKHRPDLIQFEKLSKS- 226
+ +L W +++T G + + +F S GL F ++ P ++ + ++K
Sbjct: 121 EMTDADILSWANRKVRTMG-RKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGE 179
Query: 227 -------NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272
NA Y +VA KLG + L EDI I+T + Y+
Sbjct: 180 TDDEKRLNATY----IVSVAR-KLGCSVFLLPEDIVEVNQKMILILTASIMYW 227
>pdb|3A8P|A Chain A, Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8P|B Chain B, Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8P|C Chain C, Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8P|D Chain D, Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8Q|A Chain A, Low-Resolution Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8Q|B Chain B, Low-Resolution Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8Q|C Chain C, Low-Resolution Crystal Structure Of The Tiam2 Phccex Domain
pdb|3A8Q|D Chain D, Low-Resolution Crystal Structure Of The Tiam2 Phccex Domain
Length = 263
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 2160 TLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGG 2219
TL ++ + E +A+R W + +V+L+G L FY E Y KN T
Sbjct: 24 TLQKERKLELVARR----KWKQYWVTLKGCTLLFY----------ETYGKNSTEQNSAPR 69
Query: 2220 SAQVADD--------YSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265
A A+D + KK+HVF + G YLFQA + ++ WVTA+ + C
Sbjct: 70 CALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSAC 123
>pdb|2YRN|A Chain A, Solution Structure Of The Ch Domain From Human Neuron
Navigator 2
Length = 129
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 31 GNSSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVSCR--IGDLYVDLRDGKMLLK 88
G+S S + I L D QK+ + W N +L + + I DL D+ DG +L +
Sbjct: 1 GSSGSSGKRKPVIHGLED-----QKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQ 55
Query: 89 LLEVLSGERLPRPTKG-KMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGL 147
+++V++ E++ K R +EN+D L FL + ++++ + + +I +GN + LGL
Sbjct: 56 IIQVVANEKIEDINGCPKNRSQMIENIDACLNFLAAKGINIQGLSAEEIRNGNLKAILGL 115
Query: 148 IWTI 151
+++
Sbjct: 116 FFSL 119
>pdb|2DHJ|A Chain A, Solution Structure Of The Ph Domain Of Rho Gtpase Activating
Protein 21 From Human
Length = 125
Score = 52.4 bits (124), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 2174 ASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHV 2233
S R W +++V LRG LY YKD++ + E E P + ++ +K+K+V
Sbjct: 30 GSIRPWKQMYVVLRGHSLYLYKDKREQTTPSE----EEQPISVNACLIDISYSETKRKNV 85
Query: 2234 FRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
FR+ + E LFQA++ ++M W+ + + GPSS
Sbjct: 86 FRLTTSD-CECLFQAEDRDDMLAWIKTIQE--SSNLNSGPSS 124
>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin
Tetramerization Domain Complex
Length = 161
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 1229 NGVVQFADRLNDEDHYAADKVKKKADNINDRRN-------ANKERAHQQMETLKDQLQLH 1281
+G+ QF E + KV + A+ I +RR + KER ++ + L+D L
Sbjct: 2 SGMEQFPKETVVES--SGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQ 59
Query: 1282 QFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLL 1334
F +D ++LG+W+ EK D++Y + K+ +HQ+ EAE+ + K RL+
Sbjct: 60 VFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQT-KSRLM 111
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 712 ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSED 771
A+ I+ R Q+ + +Q+ + A R ++LE++ F DA D+ W+++ V +++ +
Sbjct: 24 AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKS 83
Query: 772 VGRDEANVQSLLKKHKDVTEELKNYA---STIEALRNQASQLG 811
D N+Q +KH+ + E++ + S +E R + +G
Sbjct: 84 Y-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMG 125
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 1880 EKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNT 1939
E A+EI R EV+ + S + R QKL D+ L F L W+ + V + T
Sbjct: 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNIL-T 80
Query: 1940 SEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIK 1992
+ D + ++ HQSL+AE+ T+ + +E + H A E K
Sbjct: 81 DKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETK 133
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 609 IVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGH 668
I ER Q++ Y + ER +LE+S L D D WI EK I+ T
Sbjct: 27 IQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNIL-TDKSYE 85
Query: 669 DLTTINLLLSKHKALEDEIQAHESQLMS 696
D T I KH++LE E+Q +S+LMS
Sbjct: 86 DPTNIQGKYQKHQSLEAEVQT-KSRLMS 112
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 1543 PRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLF 1602
P+ ++ ++G K++ E + E ++++ R+Q K+ V ER KL S Q +
Sbjct: 8 PKETVVESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKR 63
Query: 1603 DASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
DA + W+ E+ + ++ + +D + Q +KH++LE V+ + + +L +T
Sbjct: 64 DADDLGKWIMEK-VNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKT 117
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEK 1502
ET E V + EEI ++ V R++ KE + R + LE F+RD +D
Sbjct: 10 ETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLG 69
Query: 1503 LWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHED 1562
WI EK+ Y + N+ +K+QSL E+ ++ + + GH
Sbjct: 70 KWIMEKVNILTDKSYEDPT-NIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSA 128
Query: 1563 SAEFTSLIEDL 1573
E + IE+L
Sbjct: 129 HEETKAHIEEL 139
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 1669 SDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAER 1720
+++I ++ +V Y K+ ER KL+++ L + R+ DDL +WI E+
Sbjct: 24 AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEK 75
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWL---TKTQTD 1084
E AE I+ER +++ ++ + + ER KLE++ L F RD D W+ TD
Sbjct: 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTD 81
Query: 1085 VASEDTPSSLADAEKLLNQHQAIREEI 1111
+ ED P+++ +HQ++ E+
Sbjct: 82 KSYED-PTNIQGK---YQKHQSLEAEV 104
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 1336 VQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDI 1395
V+ SG +++ E AE I + ++ ++ + ++G++L DS + + DD+
Sbjct: 13 VESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDL 68
Query: 1396 DSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELE 1443
W+ E + I + + D ++ QK Q +E ++ K++ +SELE
Sbjct: 69 GKWIME-KVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELE 115
>pdb|2J59|M Chain M, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
pdb|2J59|N Chain N, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
pdb|2J59|O Chain O, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
pdb|2J59|P Chain P, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
pdb|2J59|Q Chain Q, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
pdb|2J59|R Chain R, Crystal Structure Of The Arf1:arhgap21-Arfbd Complex
Length = 168
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 2174 ASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHV 2233
S R W +++V LRG LY YKD++ + E E P + ++ +K+K+V
Sbjct: 24 GSIRPWKQMYVVLRGHSLYLYKDKREQTTPSE----EEQPISVNACLIDISYSETKRKNV 79
Query: 2234 FRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
FR+ + E LFQA++ ++M W+ +
Sbjct: 80 FRLTTSD-CECLFQAEDRDDMLAWIKTI 106
>pdb|1OWA|A Chain A, Solution Structural Studies On Human Erythrocyte Alpha
Spectrin N Terminal Tetramerization Domain
Length = 156
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 1245 AADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDE 1304
A++++++ + R + KER ++ + L+D L F +D ++LG+W+ EK D+
Sbjct: 20 TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDK 79
Query: 1305 TYRSAKTVHSKWTRHQAFEAEIASNKDRLL 1334
+Y + K+ +HQ+ EAE+ + K RL+
Sbjct: 80 SYEDPTNIQGKYQKHQSLEAEVQT-KSRLM 108
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 712 ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSED 771
A+ I+ R Q+ + +Q+ + A R ++LE++ F DA D+ W+++ V +++ +
Sbjct: 21 AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKS 80
Query: 772 VGRDEANVQSLLKKHKDVTEELKNYA---STIEALRNQASQLG 811
D N+Q +KH+ + E++ + S +E R + +G
Sbjct: 81 Y-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMG 122
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 1880 EKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNT 1939
E A+EI R EV+ + S + R QKL D+ L F L W+ + V + T
Sbjct: 19 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNIL-T 77
Query: 1940 SEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIK 1992
+ D + ++ HQSL+AE+ T+ + +E + H A E K
Sbjct: 78 DKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETK 130
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 609 IVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGH 668
I ER Q++ Y + ER +LE+S L D D WI EK I+ T
Sbjct: 24 IQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNIL-TDKSYE 82
Query: 669 DLTTINLLLSKHKALEDEIQAHESQLMS 696
D T I KH++LE E+Q +S+LMS
Sbjct: 83 DPTNIQGKYQKHQSLEAEVQT-KSRLMS 109
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 1543 PRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLF 1602
P+ ++ ++G K++ E + E ++++ R+Q K+ V ER KL S Q +
Sbjct: 5 PKETVVESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKR 60
Query: 1603 DASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
DA + W+ E+ + ++ + +D + Q +KH++LE V+ + + +L +T
Sbjct: 61 DADDLGKWIMEK-VNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKT 114
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEK 1502
ET E V + EEI ++ V R++ KE + R + LE F+RD +D
Sbjct: 7 ETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLG 66
Query: 1503 LWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHED 1562
WI EK+ Y + N+ +K+QSL E+ ++ + + GH
Sbjct: 67 KWIMEKVNILTDKSYEDPT-NIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSA 125
Query: 1563 SAEFTSLIEDL 1573
E + IE+L
Sbjct: 126 HEETKAHIEEL 136
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 1669 SDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAER 1720
+++I ++ +V Y K+ ER KL+++ L + R+ DDL +WI E+
Sbjct: 21 AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEK 72
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 1336 VQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDI 1395
V+ SG +++ E AE I + ++ ++ + ++G++L DS + + DD+
Sbjct: 10 VESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDL 65
Query: 1396 DSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELE 1443
W+ E + I + + D ++ QK Q +E ++ K++ +SELE
Sbjct: 66 GKWIME-KVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELE 112
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWL---TKTQTD 1084
E AE I+ER +++ ++ + + ER KLE++ L F RD D W+ TD
Sbjct: 19 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTD 78
Query: 1085 VASEDTPSSLADAEKLLNQHQAIREEI 1111
+ ED P+++ +HQ++ E+
Sbjct: 79 KSYED-PTNIQGK---YQKHQSLEAEV 101
>pdb|1AOA|A Chain A, N-Terminal Actin-Crosslinking Domain From Human Fimbrin
Length = 275
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 54 QKKTFQKWVNS---------HLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKG 104
+K F W+N H++ ++ DL+ + DG +L K++ + + +
Sbjct: 25 EKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAIN 84
Query: 105 KMRIHCL---ENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDIT 161
K ++ EN++ AL H+ N+G+ D+ G P L LGL+W II DI
Sbjct: 85 KKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIE 144
Query: 162 IE------------ETDNQETKSAKDALLL-WC--QMKTAGYHNVNVRNFTTSWRDGLAF 206
+ ET + K + + LLL W ++ +G+ +N NF+ +D A+
Sbjct: 145 LSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKIN--NFSADIKDSKAY 202
Query: 207 NAIIHKHRP 215
++++ P
Sbjct: 203 FHLLNQIAP 211
>pdb|2SPC|A Chain A, Crystal Structure Of The Repetitive Segments Of Spectrin
pdb|2SPC|B Chain B, Crystal Structure Of The Repetitive Segments Of Spectrin
Length = 107
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
Q Y+ D AESWMS +E ++ +D + + L+KKHE + A+ + I L
Sbjct: 6 QLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTV 65
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKL 1697
A QL ++ H S+ + K+ QV + + LK+ E+R++L
Sbjct: 66 ADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 425 FNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQ 484
+ R + E+W+S + ++ D+ G VEA KKHE + I +E+++ A+ TV+
Sbjct: 8 YMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVAD 67
Query: 485 ELEAEKYHDIDRINARKENVLRLWNYLLELL 515
+L A+ ++ + ++ +++ VL W +L E L
Sbjct: 68 QLIAQNHYASNLVDEKRKQVLERWRHLKEGL 98
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 2020 LEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
L++ + RD +AE+W+ A+E +L + + VE LIKKHE F+K+ E++ +AL
Sbjct: 3 LDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62
Query: 2080 ERLT 2083
+ +
Sbjct: 63 QTVA 66
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 1176 MFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFA 1235
++ RD + AE +S +E L+ D+ VE LIK+HE F + ++ KI + A
Sbjct: 7 LYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVA 66
Query: 1236 DRLNDEDHYAADKVKKKADNINDR 1259
D+L ++HYA++ V +K + +R
Sbjct: 67 DQLIAQNHYASNLVDEKRKQVLER 90
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 642 QLYW-DMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAV 700
QLY D E+W+ +E ++ D + + L+ KH+ + I HE ++ ++ V
Sbjct: 6 QLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTV 65
Query: 701 GDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRL 740
D+L+ Q H+ ++ + + + + W++L + +R RL
Sbjct: 66 ADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 1494 FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGR 1553
+ RD E + W++ + + + N+ NV L KK++ K I+ HE +I +
Sbjct: 8 YMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVAD 67
Query: 1554 KLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKL 1591
+LI + H S + +++RW+ LK+ + E+RS+L
Sbjct: 68 QLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 1701 LKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAA 1760
L+L+M R+ + E W++ RE + + +V L ++ ++FD+ +++AA
Sbjct: 5 LQLYM--RDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAING-HEQKIAA 61
Query: 1761 VNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLE-LIETRTQM 1803
+ +ADQLIA H S + E + + E W+ L E LIE R+++
Sbjct: 62 LQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
WM +N + A VE L+ H+ I+ E A ++ +L+++NHYAS
Sbjct: 18 WMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYAS 77
Query: 1989 NEIKEKLVGLSNQRNALLHRWEERWENL 2016
N + EK R +L RW E L
Sbjct: 78 NLVDEK-------RKQVLERWRHLKEGL 98
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 744 VDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEAL 803
+D + D + WM ++++D NV++L+KKH+D + + + I AL
Sbjct: 3 LDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62
Query: 804 RNQASQLGDQ--------DKESPEVLER 823
+ A QL Q D++ +VLER
Sbjct: 63 QTVADQLIAQNHYASNLVDEKRKQVLER 90
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 849 LSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVV 908
L LY + + + W+ ++ L +VE + +++ FDK +N + ++A +
Sbjct: 5 LQLY--MRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62
Query: 909 NQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDEL 951
+A QL+ H S + ++ Q+ W L+E KR L
Sbjct: 63 QTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
>pdb|3A8N|A Chain A, Crystal Structure Of The Tiam1 Phccex Domain
Length = 279
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 2174 ASNRSWDKIFVSLRGTLLYFYK-DQKSA---KSSPE--IYYKNETPFELRGGSAQVADDY 2227
A+ R W +VSL+G L+FY+ D +S S P+ ++ +N Q ++
Sbjct: 34 ATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSI--------VQAVPEH 85
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265
KK VF + G +LFQ + E+ W+TA+ + C
Sbjct: 86 PKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSAC 123
>pdb|3PP2|A Chain A, Crystal Structure Of The Pleckstrin Homology Domain Of
Arhgap27
pdb|3PP2|B Chain B, Crystal Structure Of The Pleckstrin Homology Domain Of
Arhgap27
Length = 124
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 2171 AKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSS----PEIYYKNETPFELRGGSAQVAD- 2225
KR + W + L G +L F+KD K++ + P + E ELRG + A
Sbjct: 23 GKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPK 82
Query: 2226 DYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
D S +K+V +++ +G+EYL Q ++ ++ W A++ ++
Sbjct: 83 DKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQE 124
>pdb|2D9Y|A Chain A, Solution Structure Of The Ph Domain Of Pepp-3 From Human
Length = 117
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 2162 VRKHEWEAIAKRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGG 2219
V K W + K+AS+ + W+K + L L++YKD+K E + R
Sbjct: 11 VTKAGW--LFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE-----ESILGSIPLLSFRVA 63
Query: 2220 SAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
+ Q +D+ S+K H F+ + Y F A++ EE W+ A+ Q+ GPSS
Sbjct: 64 AVQPSDNISRK-HTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQS--GPSS 116
>pdb|2P0D|A Chain A, Arhgap9 Ph Domain In Complex With Ins(1,4,5)p3
pdb|2P0F|A Chain A, Arhgap9 Ph Domain In Complex With Ins(1,3,5)p3
pdb|2P0H|A Chain A, Arhgap9 Ph Domain In Complex With Ins(1,3,4)p3
Length = 129
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 2173 RASNRSWDKIFVSLRGTLLYFYKDQKSAKSSP---EIYYKNETPFELRGGSAQVADDYSK 2229
R ++W +V L G L FY++ S + E+ +LRG + S
Sbjct: 28 RKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSS 87
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
+++V ++ G E+L Q+ ++ E+ W AL V E+
Sbjct: 88 RRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIER 125
>pdb|1PMS|A Chain A, Pleckstrin Homology Domain Of Son Of Sevenless 1 (Sos1) With
Glycine-Serine Added To The N-Terminus, Nmr, 20
Structures
Length = 136
Score = 37.7 bits (86), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 2157 MEGTLVR---KHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
MEGTL R KHE +D + + + Q + Y+ +
Sbjct: 34 MEGTLTRVGAKHERHIFL-------FDGLMICCKSN-----HGQPRLPGASSAEYRLKEK 81
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
F +R DD S+ KH F + +G +F AK+ EE N W+ AL
Sbjct: 82 FFMRKVQINDKDDTSEYKHAFEIILKDGNSVIFSAKSAEEKNNWMAAL 129
>pdb|2YRY|A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin Homology
Domain-Containing Family A Member 6 From Human
Length = 122
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 2162 VRKHEWEAIAKRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGG 2219
V K W + K+AS+ + W+K + L L++YKD+K E + R
Sbjct: 22 VTKAGW--LFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE-----ESILGSIPLLSFRVA 74
Query: 2220 SAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268
+ Q +D+ S+K H F+ + Y F A++ EE W+ A+ Q
Sbjct: 75 AVQPSDNISRK-HTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQ 122
>pdb|3R6N|A Chain A, Crystal Structure Of A Rigid Four Spectrin Repeat Fragment
Of The Human Desmoplakin Plakin Domain
pdb|3R6N|B Chain B, Crystal Structure Of A Rigid Four Spectrin Repeat Fragment
Of The Human Desmoplakin Plakin Domain
Length = 450
Score = 37.4 bits (85), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Query: 613 VQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTT 672
+ QLE+ Y L+K + ER L R+L + + E WI + E+ D T
Sbjct: 71 IYQLEEEYENLLKASFERMDHL---RQLQNIIQATSREIMWINDCEEEELLYDWSDKNTN 127
Query: 673 INLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDL 732
I +++ E +L + D+LV QH +D+I + W +L +
Sbjct: 128 IAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQI 187
Query: 733 AAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDV--- 789
L+E + QFF +A + ++ + + +Q LL++ K++
Sbjct: 188 TKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKE 247
Query: 790 TEELKNYASTIEALRNQASQLGDQDKESPE 819
E++ Y ++ L N++ ++ +P+
Sbjct: 248 REKILEYKRQVQNLVNKSKKIVQLKPRNPD 277
>pdb|3PDY|A Chain A, Structure Of The Third And Fourth Spectrin Repeats Of The
Plakin Domain Of Plectin
pdb|3PDY|B Chain B, Structure Of The Third And Fourth Spectrin Repeats Of The
Plakin Domain Of Plectin
Length = 210
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Query: 755 DVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQD 814
D+ W+ + V + G D +V++ L H+ + + ++ + + IE R+ QL
Sbjct: 16 DLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPAT 75
Query: 815 KESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLAT 874
+ + + L ++ +Y +LL +K R + L SL+ + A W+ EK+
Sbjct: 76 RGA--YRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEEVG 130
Query: 875 MVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLN 934
++ K Y +E+ ++ + +LL +HP + + Q L
Sbjct: 131 FDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQ 190
Query: 935 HDWA 938
W+
Sbjct: 191 TQWS 194
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 653 WIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGA 712
W++E + V + G DL ++ L H+ L I+ +++ + +L
Sbjct: 20 WVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAY 79
Query: 713 DRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDV 772
GRL A LL+ + R + LE H F A A +W+ + E+V
Sbjct: 80 RDCLGRLDLQYA---KLLNSSKARLRSLE---SLHSFVAAATKELMWLNEK----EEEEV 129
Query: 773 GRD----EANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKES-PEVLERLASI 827
G D N+ + + + + EL+ I+ L+N +L +D + P V A++
Sbjct: 130 GFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAAL 189
Query: 828 EFRYKELLELA 838
+ ++ +L+L
Sbjct: 190 QTQWSWMLQLC 200
>pdb|3PE0|A Chain A, Structure Of The Central Region Of The Plakin Domain Of
Plectin
pdb|3PE0|B Chain B, Structure Of The Central Region Of The Plakin Domain Of
Plectin
Length = 283
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 653 WIKEKEQIVSTGDIGHDLTTINLLLSKHK----ALEDEIQAHESQLMSVIAVGDELVNQQ 708
W+ EKE+ ++G D + N ++ K AL E++ E ++ + GD L+ +
Sbjct: 23 WLNEKEE----EEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 78
Query: 709 HFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIW---MLDTVR 765
H + W +L L L+E + QFF+D + + + + +R
Sbjct: 79 HPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALR 138
Query: 766 LVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQA 807
S D ++ LL+ +D E+L Y + L +A
Sbjct: 139 RKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRA 180
>pdb|1V89|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Human Kiaa0053 Protein
Length = 118
Score = 36.2 bits (82), Expect = 0.25, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
+R+ ++W + + LR LY+YKD++ K +Y T E+ + K
Sbjct: 17 QRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAG------K 70
Query: 2232 HVFRVKADNGAE-------YLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
VF + + + Y+ A + EM +WV L V A GPSS
Sbjct: 71 FVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRV----AGSGPSS 117
>pdb|3DLJ|A Chain A, Crystal Structure Of Human Carnosine Dipeptidase 1
pdb|3DLJ|B Chain B, Crystal Structure Of Human Carnosine Dipeptidase 1
Length = 485
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 1479 LARQRALEKKKEAYQFRRD--IEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAK 1536
+A + +EK+K+ + D + + LWI+++ P+ GNS F V +K ++Q
Sbjct: 182 VALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVE-VKCRDQDFHS 240
Query: 1537 EIDN---HEPRINLICNNGRKLIDEGHEDSA----EFTSLIEDLMDRWQQLKKAVDERRS 1589
HEP +L+ G + GH E L E+ ++ ++ + ++E R+
Sbjct: 241 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN 300
Query: 1590 KLIQSEKAQQYLFDASE 1606
S + +++LFD E
Sbjct: 301 ----SSRVEKFLFDTKE 313
>pdb|4EDL|A Chain A, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDL|B Chain B, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDL|C Chain C, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDL|D Chain D, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDL|E Chain E, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDL|F Chain F, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDM|A Chain A, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDM|B Chain B, Crystal Structure Of Beta-Parvin Ch2 Domain
pdb|4EDN|A Chain A, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|B Chain B, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|C Chain C, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|D Chain D, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|E Chain E, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|F Chain F, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|G Chain G, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|H Chain H, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|I Chain I, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
pdb|4EDN|J Chain J, Crystal Structure Of Beta-Parvin Ch2 Domain In Complex
With Paxillin Ld1 Motif
Length = 133
Score = 35.0 bits (79), Expect = 0.55, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 31 GNSSSRLFERSRIKALAD---ERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLL 87
GNS FER L D ++ SV KK+ +VN HL +++ + +L DG L+
Sbjct: 1 GNSGR--FERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLV 58
Query: 88 KLLEVLSGERLP------RPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNP 141
L+ +L +P P ++H NV A + + + + D+V+ +
Sbjct: 59 LLMGLLEDYFVPLHHFYLTPESFDQKVH---NVSFAFELMLDGGLKKPKARPEDVVNLDL 115
Query: 142 RLSLGLIWTIILRFQ 156
+ +L +++ + +++
Sbjct: 116 KSTLRVLYNLFTKYK 130
>pdb|2DKP|A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin Homology
Domain-Containing Protein Family A Member 5 From Human
Length = 128
Score = 34.7 bits (78), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 2179 WDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKA 2238
W K + L L++Y+D+K I + F++ + ++D+ +K+ F+
Sbjct: 38 WKKRWFVLSDLCLFYYRDEKEEGILGSILLPS---FQI---ALLTSEDHINRKYAFKAAH 91
Query: 2239 DNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
N Y F +EM W+ A+ + Q S GPSS
Sbjct: 92 PNMRTYYFCTDTGKEMELWMKAMLDAALVQTS-GPSS 127
>pdb|2ODU|A Chain A, Crystal Structure Of A Fragment Of The Plakin Domain Of
Plectin
Length = 235
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 304 EYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVL 363
EY L LL+W++ A+ +R+F +S ++ QF ++ +E P K +K + +
Sbjct: 15 EYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGI 74
Query: 364 LFTLQSKMRANNQKPYTPKEGKMISDINKAW 394
+L+ ++A K P G D+ K W
Sbjct: 75 YQSLEGAVQAGQLK--VPP-GYHPLDVEKEW 102
>pdb|2ODV|A Chain A, Crystal Structure Of A Fragment Of The Plakin Domain Of
Plectin, Cys To Ala Mutant
Length = 235
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 304 EYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVL 363
EY L LL+W++ A+ +R+F +S ++ QF ++ +E P K +K + +
Sbjct: 15 EYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGI 74
Query: 364 LFTLQSKMRANNQKPYTPKEGKMISDINKAW 394
+L+ ++A K P G D+ K W
Sbjct: 75 YQSLEGAVQAGQLK--VPP-GYHPLDVEKEW 102
>pdb|3KSY|A Chain A, Crystal Structure Of The Histone Domain, Dh-Ph Unit, And
Catalytic Unit Of The Ras Activator Son Of Sevenless
(Sos)
Length = 1049
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 2157 MEGTLVR---KHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
MEGTL R KHE +D + + + Q + Y+ +
Sbjct: 446 MEGTLTRVGAKHERHIFL-------FDGLMICCKSN-----HGQPRLPGASNAEYRLKEK 493
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
F +R DD ++ KH F + + +F AK+ EE N W+ AL
Sbjct: 494 FFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAAL 541
>pdb|3KMW|B Chain B, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|B Chain B, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 129
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 47 ADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP------R 100
A ++ +V KKT +VN HL +++ + +L DG L+ L+ +L G +P
Sbjct: 14 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 73
Query: 101 PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQ 156
P + ++ NV A + +++ + DIV+ + + +L +++ + +++
Sbjct: 74 PDSFEQKVL---NVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 126
>pdb|1XDV|A Chain A, Experimentally Phased Structure Of Human The Son Of
Sevenless Protein At 4.1 Ang.
pdb|1XDV|B Chain B, Experimentally Phased Structure Of Human The Son Of
Sevenless Protein At 4.1 Ang
Length = 847
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 2157 MEGTLVR---KHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
MEGTL R KHE +D + + + Q + Y+ +
Sbjct: 249 MEGTLTRVGAKHERHIFL-------FDGLMICCKSN-----HGQPRLPGASNAEYRLKEK 296
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
F +R DD ++ KH F + + +F AK+ EE N W+ AL
Sbjct: 297 FFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAAL 344
>pdb|1XD4|A Chain A, Crystal Structure Of The Dh-Ph-Cat Module Of Son Of
Sevenless (Sos)
pdb|1XD4|B Chain B, Crystal Structure Of The Dh-Ph-Cat Module Of Son Of
Sevenless (Sos)
Length = 852
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 2157 MEGTLVR---KHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
MEGTL R KHE +D + + + Q + Y+ +
Sbjct: 249 MEGTLTRVGAKHERHIFL-------FDGLMICCKSN-----HGQPRLPGASNAEYRLKEK 296
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
F +R DD ++ KH F + + +F AK+ EE N W+ AL
Sbjct: 297 FFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAAL 344
>pdb|2IAK|A Chain A, Crystal Structure Of A Protease Resistant Fragment Of The
Plakin Domain Of Bullous Pemphigoid Antigen1 (Bpag1)
Length = 224
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 1394 DIDSWMNELEKQIENEDTGSDLASVNILMQKQQMI-----ETQMAVKAKQVSELETQAEI 1448
D+ +W++E++ Q++ + GSDL SV ++ + + E + ++K ++SE++ A
Sbjct: 31 DLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAP- 89
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEA-YQFRRDIEDEKLWIAE 1507
L+ + DK+ R E LL R E+ + + F +E +W+ E
Sbjct: 90 LKLSYTDKL-----------HRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNE 138
Query: 1508 KLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGH 1560
K S + ++ +V K + L +E++ E I + +L+ E H
Sbjct: 139 KEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENH 191
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 773 GRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYK 832
G D +V+S L+ HK+V ++ + S+++ + Q+ K S ++L +E +Y
Sbjct: 49 GSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLS--YTDKLHRLESQYA 106
Query: 833 ELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYD 892
+LL ++ ++R LD +L+ + A W+ EK+ + V K +
Sbjct: 107 KLLNTSR-NQERHLD--TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHA 163
Query: 893 GFDKEMNANASRVAVVNQLARQLLHVEHP 921
+E+ + V ++A QLL HP
Sbjct: 164 ELMRELEQKEESIKAVQEIAEQLLLENHP 192
>pdb|2VZC|A Chain A, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha Parvin
pdb|2VZC|B Chain B, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha Parvin
pdb|2VZD|A Chain A, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha Parvin In Complex With Paxillin Ld1
Motif
pdb|2VZD|B Chain B, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha Parvin In Complex With Paxillin Ld1
Motif
pdb|2VZG|B Chain B, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha-Parvin In Complex With Paxillin Ld2
Motif
pdb|2VZI|B Chain B, Crystal Structure Of The C-Terminal Calponin Homology
Domain Of Alpha-Parvin In Complex With Paxillin Ld4
Motif
Length = 131
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 47 ADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP------R 100
A ++ +V KKT +VN HL +++ + +L DG L+ L+ +L G +P
Sbjct: 16 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 75
Query: 101 PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQ 156
P + ++ NV A + +++ + DIV+ + + +L +++ + +++
Sbjct: 76 PDSFEQKVL---NVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 128
>pdb|2K2R|A Chain A, The Nmr Structure Of Alpha-Parvin Ch2PAXILLIN LD1 COMPLEX
Length = 129
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 47 ADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP------R 100
A ++ +V KKT +VN HL +++ + +L DG L+ L+ +L G +P
Sbjct: 14 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 73
Query: 101 PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQ 156
P + ++ NV A + +++ + DIV+ + + +L +++ + +++
Sbjct: 74 PDSFEQKVL---NVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 126
>pdb|1AWE|A Chain A, Human Sos1 Pleckstrin Homology (Ph) Domain, Nmr, 20
Structures
Length = 130
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 2157 MEGTLVR---KHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
MEGTL R KHE +D + + + Q + Y+ +
Sbjct: 25 MEGTLTRVGAKHERHIFL-------FDGLMICCKSN-----HGQPRLPGASNAEYRLKEK 72
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
F +R DD ++ KH F + + +F AK+ EE N W+ AL
Sbjct: 73 FFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAAL 120
>pdb|2D9X|A Chain A, Solution Structure Of The Ph Domain Of Oxysterol Binding
Protein-Related Protein 11 From Human
Length = 120
Score = 32.7 bits (73), Expect = 2.5, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 24/98 (24%)
Query: 2188 GTLLYFYKDQKSAKSSPEIYYKNETP---FELRGGSAQVADDYSKKKHVFRVKADNGAEY 2244
G L YF +Q +N+ P +L G +D+ S H F V A +G +Y
Sbjct: 36 GLLEYFVNEQS----------RNQKPRGTLQLAGAVISPSDEDS---HTFTVNAASGEQY 82
Query: 2245 LFQAKNDEEMNKWVTALSNVCEQ-------QASGGPSS 2275
+A + +E WV+ L +C Q + + GPSS
Sbjct: 83 KLRATDAKERQHWVSRL-QICTQHHTEAIGKNNSGPSS 119
>pdb|2COF|A Chain A, Solution Structure Of The C-Terminal Ph Domain Of
Hypothetical Protein Kiaa1914 From Human
Length = 107
Score = 32.3 bits (72), Expect = 3.6, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235
N W + S+R L+FY+D+ +K + + P L G V D + FR
Sbjct: 19 NSQWKSRWCSVRDNHLHFYQDRNRSKVA-------QQPLSLVGCEV-VPDPSPDHLYSFR 70
Query: 2236 VKADNGAEYLFQAKNDEEMNKWVTAL 2261
+ +AK+ EEM W+ L
Sbjct: 71 ILHKGEELAKLEAKSSEEMGHWLGLL 96
>pdb|1PLS|A Chain A, Solution Structure Of A Pleckstrin Homology Domain
Length = 113
Score = 32.0 bits (71), Expect = 4.2, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 2163 RKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGS-A 2221
R E + K + +W ++V L + FYK K + +SP K P L+G +
Sbjct: 5 RIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYK--KKSDNSP----KGMIP--LKGSTLT 56
Query: 2222 QVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWV 2258
D+ K+ VF++ ++ FQA EE + WV
Sbjct: 57 SPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWV 93
>pdb|1X1F|A Chain A, Solution Structure Of The Ph Domain Of Human Docking Protein
Brdg1
Length = 149
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2170 IAKRASNRSWDKIFVSLRGTLLYFYKDQKS 2199
+ KR+ R ++ + LRGT L+FY D+KS
Sbjct: 25 LIKRSGYREYEHYWTELRGTTLFFYTDKKS 54
>pdb|1WGQ|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Mouse Ethanol Decreased 4 Protein
Length = 109
Score = 31.2 bits (69), Expect = 7.8, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 2173 RASNRSWDKIFVSLRGTLLYFY---KDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK 2229
+ S + W ++ ++ +LY Y +D + +S P L G + + D +
Sbjct: 18 KGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQP-----------LLGFTVTLVKDENS 66
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
+ VF++ Y+F+A + +W+ A ++ GPSS
Sbjct: 67 ESKVFQLLHKGMVFYVFKADDAHSTQRWIDAF----QEGTVSGPSS 108
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,194,183
Number of Sequences: 62578
Number of extensions: 2460692
Number of successful extensions: 8264
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 7602
Number of HSP's gapped (non-prelim): 475
length of query: 2301
length of database: 14,973,337
effective HSP length: 114
effective length of query: 2187
effective length of database: 7,839,445
effective search space: 17144866215
effective search space used: 17144866215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)