Query psy18058
Match_columns 2301
No_of_seqs 698 out of 3573
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 21:27:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18058.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18058hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0517|consensus 100.0 0E+00 0E+00 3802.2 245.2 2270 24-2300 19-2473(2473)
2 KOG0517|consensus 100.0 9E-152 2E-156 1432.5 218.3 1947 54-2071 168-2261(2473)
3 KOG0040|consensus 100.0 1E-147 2E-152 1363.9 147.1 1356 711-2083 11-1441(2399)
4 KOG0040|consensus 100.0 1E-125 2E-130 1169.2 176.2 1658 302-2005 469-2231(2399)
5 KOG0035|consensus 100.0 3.2E-64 7E-69 630.3 12.6 691 18-736 4-725 (890)
6 COG5069 SAC6 Ca2+-binding acti 100.0 1.6E-44 3.4E-49 410.2 11.6 344 47-396 3-352 (612)
7 KOG0046|consensus 100.0 3.5E-30 7.5E-35 298.0 13.3 290 52-354 118-442 (627)
8 KOG0046|consensus 100.0 1.8E-28 3.8E-33 284.0 14.7 219 48-273 383-613 (627)
9 cd01230 PH_EFA6 EFA6 Pleckstri 99.9 3.3E-25 7.2E-30 220.6 12.5 114 2156-2271 1-117 (117)
10 PF15410 PH_9: Pleckstrin homo 99.9 7E-25 1.5E-29 224.1 9.6 111 2156-2266 1-119 (119)
11 cd01253 PH_beta_spectrin Beta- 99.8 2.7E-19 5.8E-24 180.7 11.4 103 2157-2263 1-103 (104)
12 KOG0932|consensus 99.8 8.9E-20 1.9E-24 212.3 5.1 135 2148-2283 499-635 (774)
13 cd00176 SPEC Spectrin repeats, 99.7 1.3E-14 2.8E-19 170.2 28.4 209 1174-1382 2-212 (213)
14 cd00176 SPEC Spectrin repeats, 99.7 1.7E-14 3.6E-19 169.3 27.7 210 1385-1594 2-212 (213)
15 KOG3631|consensus 99.6 8.1E-16 1.8E-20 163.9 12.5 219 55-276 92-363 (365)
16 cd00014 CH Calponin homology d 99.5 9.2E-15 2E-19 149.6 7.8 103 54-156 2-107 (107)
17 smart00033 CH Calponin homolog 99.5 2E-14 4.4E-19 146.1 7.8 98 55-153 2-102 (103)
18 KOG4286|consensus 99.5 1.6E-11 3.4E-16 149.2 28.8 308 1597-1915 3-336 (966)
19 PF00307 CH: Calponin homology 99.5 1.7E-13 3.8E-18 140.5 10.0 102 174-276 1-108 (108)
20 cd01260 PH_CNK Connector enhan 99.4 5.1E-13 1.1E-17 132.8 10.0 95 2157-2264 2-96 (96)
21 PF00307 CH: Calponin homology 99.4 7E-13 1.5E-17 136.0 8.5 101 55-156 1-108 (108)
22 KOG4286|consensus 99.4 8.5E-11 1.8E-15 143.0 27.1 305 641-956 4-336 (966)
23 cd01233 Unc104 Unc-104 pleckst 99.4 2.3E-12 5.1E-17 128.1 10.3 95 2155-2266 2-99 (100)
24 cd00014 CH Calponin homology d 99.4 6E-13 1.3E-17 136.2 6.0 102 173-276 2-107 (107)
25 cd01264 PH_melted Melted pleck 99.3 1.2E-11 2.5E-16 119.6 9.8 95 2157-2264 2-100 (101)
26 COG5069 SAC6 Ca2+-binding acti 99.3 2.9E-11 6.3E-16 140.3 13.5 266 57-343 123-415 (612)
27 cd01238 PH_Tec Tec pleckstrin 99.3 1.7E-11 3.6E-16 123.0 10.0 96 2157-2263 2-105 (106)
28 cd01257 PH_IRS Insulin recepto 99.2 3.4E-11 7.3E-16 117.7 10.2 93 2155-2263 2-100 (101)
29 cd01252 PH_cytohesin Cytohesin 99.2 3.6E-11 7.7E-16 125.6 11.1 93 2157-2266 2-114 (125)
30 cd01265 PH_PARIS-1 PARIS-1 ple 99.2 3.8E-11 8.2E-16 117.9 10.3 90 2158-2264 2-93 (95)
31 cd01251 PH_centaurin_alpha Cen 99.2 4.4E-11 9.6E-16 119.3 10.7 94 2157-2266 1-101 (103)
32 cd01247 PH_GPBP Goodpasture an 99.2 8.1E-11 1.7E-15 114.0 10.5 90 2157-2263 1-90 (91)
33 cd01236 PH_outspread Outspread 99.2 5.8E-11 1.3E-15 116.3 9.6 95 2157-2263 1-102 (104)
34 smart00033 CH Calponin homolog 99.2 9.1E-12 2E-16 126.6 4.1 97 174-270 2-102 (103)
35 cd01250 PH_centaurin Centaurin 99.2 6.6E-11 1.4E-15 117.9 9.8 93 2157-2263 1-93 (94)
36 cd01246 PH_oxysterol_bp Oxyste 99.2 1.1E-10 2.3E-15 115.6 9.8 91 2157-2264 1-91 (91)
37 PF00169 PH: PH domain; Inter 99.1 3.9E-10 8.5E-15 115.0 11.3 98 2155-2265 1-103 (104)
38 cd01244 PH_RasGAP_CG9209 RAS_G 99.1 2.6E-10 5.6E-15 110.9 9.2 83 2170-2263 13-97 (98)
39 cd01266 PH_Gab Gab (Grb2-assoc 99.1 4.4E-10 9.5E-15 113.8 9.3 93 2158-2264 2-107 (108)
40 KOG3631|consensus 99.0 4.3E-10 9.3E-15 120.9 7.8 119 32-156 242-363 (365)
41 smart00150 SPEC Spectrin repea 99.0 2.1E-09 4.6E-14 108.9 12.7 100 1918-2017 2-101 (101)
42 cd01263 PH_anillin Anillin Ple 99.0 9.2E-10 2E-14 110.9 9.3 97 2156-2263 2-121 (122)
43 cd01235 PH_SETbf Set binding f 99.0 1.7E-09 3.7E-14 109.0 10.5 91 2158-2265 2-101 (101)
44 smart00150 SPEC Spectrin repea 99.0 5.5E-09 1.2E-13 105.8 13.0 100 642-741 2-101 (101)
45 PF00435 Spectrin: Spectrin re 99.0 1.1E-08 2.5E-13 104.4 14.8 104 1915-2018 2-105 (105)
46 cd01241 PH_Akt Akt pleckstrin 98.9 4.3E-09 9.3E-14 105.0 10.5 97 2155-2264 1-101 (102)
47 cd01245 PH_RasGAP_CG5898 RAS G 98.9 2.8E-09 6.1E-14 103.0 8.7 90 2158-2263 2-97 (98)
48 PF00435 Spectrin: Spectrin re 98.9 2E-08 4.4E-13 102.5 14.3 103 640-742 3-105 (105)
49 cd01237 Unc112 Unc-112 pleckst 98.8 1.7E-08 3.6E-13 97.0 9.0 86 2172-2265 13-103 (106)
50 KOG0518|consensus 98.8 3.8E-11 8.2E-16 152.9 -12.3 217 46-270 19-246 (1113)
51 KOG4240|consensus 98.8 8.8E-06 1.9E-10 106.9 35.4 444 1028-1489 120-600 (1025)
52 KOG0516|consensus 98.8 2.6E-06 5.5E-11 121.7 33.5 112 51-163 72-189 (1047)
53 smart00233 PH Pleckstrin homol 98.7 9.5E-08 2.1E-12 96.6 11.9 98 2156-2265 2-101 (102)
54 KOG4240|consensus 98.7 6.6E-06 1.4E-10 108.0 28.8 527 1449-1995 4-575 (1025)
55 PF11971 CAMSAP_CH: CAMSAP CH 98.7 7.8E-09 1.7E-13 96.9 1.7 75 180-255 1-82 (85)
56 cd01219 PH_FGD FGD (faciogenit 98.6 2.2E-07 4.8E-12 92.5 10.0 98 2156-2266 3-100 (101)
57 cd00821 PH Pleckstrin homology 98.6 2.2E-07 4.8E-12 92.8 9.5 95 2157-2263 1-95 (96)
58 KOG0930|consensus 98.6 2.2E-07 4.7E-12 101.1 9.6 96 2156-2267 261-377 (395)
59 cd01254 PH_PLD Phospholipase D 98.5 2.9E-07 6.2E-12 94.9 9.3 95 2157-2264 1-121 (121)
60 PF12128 DUF3584: Protein of u 98.5 0.035 7.7E-07 81.0 82.7 107 1671-1801 711-819 (1201)
61 PF12128 DUF3584: Protein of u 98.5 0.04 8.6E-07 80.5 81.0 52 1247-1298 710-763 (1201)
62 TIGR00606 rad50 rad50. This fa 98.5 0.058 1.3E-06 79.8 109.3 66 1421-1490 879-944 (1311)
63 TIGR00606 rad50 rad50. This fa 98.4 0.09 2E-06 77.9 110.5 65 1210-1278 879-943 (1311)
64 KOG0035|consensus 98.3 8.4E-07 1.8E-11 115.0 8.7 301 173-519 422-726 (890)
65 PF15409 PH_8: Pleckstrin homo 98.3 2.9E-06 6.4E-11 79.8 8.5 86 2159-2264 1-88 (89)
66 cd00900 PH-like Pleckstrin hom 98.3 4.2E-06 9.1E-11 84.0 10.2 95 2158-2263 2-98 (99)
67 PF15413 PH_11: Pleckstrin hom 98.3 3E-06 6.5E-11 86.0 9.0 99 2157-2264 1-112 (112)
68 PRK04863 mukB cell division pr 98.2 0.13 2.7E-06 74.9 102.4 401 1523-1943 838-1269(1486)
69 KOG4407|consensus 98.2 1.3E-07 2.9E-12 121.4 -4.1 113 2154-2266 922-1042(1973)
70 KOG0161|consensus 98.2 0.19 4E-06 73.3 121.0 159 1777-1940 1656-1820(1930)
71 cd01220 PH_CDEP Chondrocyte-de 98.1 1.7E-05 3.6E-10 78.1 9.6 96 2156-2266 3-98 (99)
72 cd01242 PH_ROK Rok (Rho- assoc 98.0 3.1E-05 6.7E-10 74.5 10.0 100 2157-2265 2-110 (112)
73 cd01256 PH_dynamin Dynamin ple 98.0 3.2E-05 6.9E-10 71.5 9.5 94 2156-2264 2-104 (110)
74 PRK04863 mukB cell division pr 98.0 0.33 7.1E-06 70.8 102.8 108 1337-1444 973-1081(1486)
75 cd01243 PH_MRCK MRCK (myotonic 98.0 6.2E-05 1.3E-09 73.6 10.7 100 2157-2264 4-118 (122)
76 cd01231 PH_Lnk LNK-family Plec 97.9 3.4E-05 7.3E-10 71.9 8.2 85 2176-2263 18-106 (107)
77 KOG2046|consensus 97.9 4E-05 8.6E-10 81.8 8.0 94 47-140 19-113 (193)
78 cd01249 PH_oligophrenin Oligop 97.8 9.3E-05 2E-09 71.4 9.4 97 2157-2262 1-102 (104)
79 KOG0994|consensus 97.8 0.31 6.8E-06 64.5 58.9 183 618-809 1167-1365(1758)
80 cd01259 PH_Apbb1ip Apbb1ip (Am 97.6 0.0001 2.3E-09 71.0 6.3 95 2157-2264 2-107 (114)
81 KOG0994|consensus 97.6 0.7 1.5E-05 61.4 58.6 121 933-1060 1165-1292(1758)
82 cd01258 PH_syntrophin Syntroph 97.5 0.0002 4.3E-09 70.3 7.1 98 2159-2263 3-107 (108)
83 KOG0690|consensus 97.5 0.00017 3.6E-09 81.7 7.1 104 2152-2268 12-119 (516)
84 KOG0521|consensus 97.3 0.075 1.6E-06 71.9 29.2 99 2153-2267 272-370 (785)
85 cd01234 PH_CADPS CADPS (Ca2+-d 97.3 0.00031 6.7E-09 65.8 4.4 94 2157-2267 4-112 (117)
86 KOG0161|consensus 97.2 3 6.6E-05 61.5 127.1 249 1352-1621 1565-1820(1930)
87 PF11971 CAMSAP_CH: CAMSAP CH 97.1 0.00044 9.5E-09 65.4 3.5 78 61-138 1-83 (85)
88 KOG2059|consensus 97.0 0.0011 2.3E-08 83.0 6.8 102 2152-2266 562-665 (800)
89 cd01218 PH_phafin2 Phafin2 Pl 97.0 0.0032 7E-08 62.4 8.8 97 2156-2268 5-101 (104)
90 COG5199 SCP1 Calponin [Cytoske 96.9 0.0013 2.8E-08 65.7 5.1 101 52-153 12-114 (178)
91 cd01261 PH_SOS Son of Sevenles 96.8 0.0055 1.2E-07 61.4 8.8 91 2176-2266 17-110 (112)
92 PRK04778 septation ring format 96.8 4.1 8.9E-05 54.8 52.8 458 713-1208 60-543 (569)
93 PRK03918 chromosome segregatio 96.6 7.3 0.00016 56.3 67.2 18 830-847 159-176 (880)
94 PTZ00267 NIMA-related protein 96.5 0.0064 1.4E-07 80.5 8.9 102 2153-2266 375-477 (478)
95 KOG3531|consensus 96.4 0.0014 3E-08 83.1 2.2 92 2156-2264 925-1018(1036)
96 PRK02224 chromosome segregatio 96.4 9.9 0.00021 54.9 77.0 73 890-967 476-549 (880)
97 KOG3640|consensus 96.4 0.0045 9.7E-08 79.9 6.3 106 2152-2268 987-1109(1116)
98 KOG3751|consensus 96.3 0.006 1.3E-07 73.9 6.5 98 2153-2263 315-422 (622)
99 PF13514 AAA_27: AAA domain 96.3 13 0.00028 54.8 93.6 313 778-1121 151-478 (1111)
100 KOG4674|consensus 96.2 13 0.00029 54.3 154.8 48 821-868 383-431 (1822)
101 PRK04778 septation ring format 96.0 9.8 0.00021 51.3 54.5 410 1033-1480 62-494 (569)
102 PTZ00283 serine/threonine prot 95.9 0.014 3.1E-07 77.2 8.0 50 2218-2267 440-491 (496)
103 cd01239 PH_PKD Protein kinase 95.8 0.03 6.5E-07 54.9 7.3 76 2157-2249 2-82 (117)
104 PRK03918 chromosome segregatio 95.7 19 0.0004 52.2 67.0 20 999-1018 408-427 (880)
105 KOG1090|consensus 95.5 0.012 2.6E-07 75.6 4.3 92 2157-2265 1636-1731(1732)
106 cd01221 PH_ephexin Ephexin Ple 95.3 0.074 1.6E-06 54.2 8.4 84 2178-2262 26-119 (125)
107 PF08580 KAR9: Yeast cortical 95.1 17 0.00037 49.4 32.0 278 643-941 34-358 (683)
108 KOG4674|consensus 95.1 30 0.00066 50.9 161.9 77 879-955 519-599 (1822)
109 PF06294 DUF1042: Domain of Un 95.0 0.026 5.7E-07 60.9 4.7 97 59-157 2-101 (158)
110 PLN02866 phospholipase D 95.0 0.14 3.1E-06 69.3 12.3 113 2153-2266 180-308 (1068)
111 PRK02224 chromosome segregatio 95.0 29 0.00064 50.1 79.1 57 789-849 480-536 (880)
112 PF08580 KAR9: Yeast cortical 94.9 22 0.00048 48.3 34.7 121 1026-1158 233-358 (683)
113 cd01225 PH_Cool_Pix Cool (clon 94.7 0.11 2.4E-06 50.9 7.5 81 2180-2265 29-109 (111)
114 PF06294 DUF1042: Domain of Un 94.7 0.02 4.3E-07 61.9 2.7 92 177-276 1-100 (158)
115 KOG0248|consensus 94.7 0.034 7.4E-07 69.3 4.9 93 2176-2279 262-355 (936)
116 KOG3723|consensus 94.5 0.024 5.3E-07 69.0 3.1 100 2155-2267 735-838 (851)
117 PF13514 AAA_27: AAA domain 94.3 46 0.00099 49.2 96.1 336 555-939 147-517 (1111)
118 PF06160 EzrA: Septation ring 94.0 32 0.0007 46.2 56.4 356 1032-1411 57-435 (560)
119 PLN00188 enhanced disease resi 93.7 0.23 5E-06 64.7 9.6 105 2153-2268 2-112 (719)
120 PF06160 EzrA: Septation ring 93.4 40 0.00087 45.3 55.5 123 924-1052 56-185 (560)
121 PF14593 PH_3: PH domain; PDB: 93.1 0.32 6.9E-06 48.3 7.5 91 2152-2267 10-101 (104)
122 cd01240 PH_beta-ARK Beta adren 92.8 0.17 3.7E-06 48.9 4.8 95 2155-2266 3-99 (116)
123 KOG3523|consensus 92.4 0.23 5E-06 62.1 6.6 86 2176-2262 496-591 (695)
124 cd01224 PH_Collybistin Collybi 92.0 0.6 1.3E-05 46.3 7.7 80 2180-2263 19-105 (109)
125 cd01223 PH_Vav Vav pleckstrin 92.0 0.96 2.1E-05 45.4 9.1 87 2180-2268 21-114 (116)
126 KOG0971|consensus 92.0 57 0.0012 43.7 77.6 25 1209-1233 1016-1040(1243)
127 KOG0532|consensus 91.7 0.13 2.8E-06 64.1 3.4 81 59-141 582-669 (722)
128 cd01226 PH_exo84 Exocyst compl 90.7 0.96 2.1E-05 44.2 7.5 79 2180-2265 20-98 (100)
129 PF15406 PH_6: Pleckstrin homo 90.6 0.58 1.3E-05 45.5 5.8 68 2183-2262 43-110 (112)
130 KOG4424|consensus 89.5 0.51 1.1E-05 59.0 5.8 104 2152-2268 269-372 (623)
131 PF04912 Dynamitin: Dynamitin 89.5 60 0.0013 41.6 24.7 58 777-834 87-144 (388)
132 KOG1450|consensus 89.2 0.73 1.6E-05 59.6 7.0 115 2152-2267 244-365 (650)
133 PF15408 PH_7: Pleckstrin homo 87.9 0.33 7.2E-06 44.1 2.0 90 2158-2266 1-98 (104)
134 KOG0996|consensus 87.9 1.4E+02 0.003 41.9 76.8 89 997-1085 441-530 (1293)
135 cd01222 PH_clg Clg (common-sit 86.5 4.7 0.0001 39.7 9.3 77 2180-2265 17-95 (97)
136 PF10174 Cast: RIM-binding pro 86.0 1.6E+02 0.0035 40.8 72.9 119 1316-1445 478-598 (775)
137 KOG1117|consensus 85.9 1.8 3.8E-05 56.4 7.5 103 2152-2264 489-600 (1186)
138 KOG3549|consensus 85.3 1.8 3.9E-05 50.3 6.5 107 2152-2266 278-387 (505)
139 KOG2046|consensus 83.3 2.8 6.2E-05 45.9 6.7 81 173-256 26-111 (193)
140 KOG0996|consensus 82.1 2.4E+02 0.0053 39.8 77.7 138 1309-1449 435-575 (1293)
141 KOG1738|consensus 82.0 0.26 5.7E-06 62.4 -1.9 69 2156-2237 563-631 (638)
142 cd01232 PH_TRIO Trio pleckstri 81.6 6.2 0.00013 40.2 8.0 84 2180-2265 25-112 (114)
143 PRK01156 chromosome segregatio 80.9 3E+02 0.0064 40.0 63.4 20 1212-1231 416-435 (895)
144 KOG1451|consensus 79.7 1.9E+02 0.0042 37.1 30.9 102 2154-2264 264-366 (812)
145 KOG0995|consensus 79.5 2.1E+02 0.0044 37.3 37.5 38 985-1022 328-365 (581)
146 KOG2996|consensus 79.0 2.1 4.4E-05 53.2 4.3 68 71-138 28-101 (865)
147 KOG1739|consensus 79.0 3.3 7.1E-05 50.7 5.8 80 2176-2265 37-116 (611)
148 COG1196 Smc Chromosome segrega 79.0 3.8E+02 0.0082 40.0 89.7 51 1778-1828 974-1026(1163)
149 TIGR02169 SMC_prok_A chromosom 78.5 4E+02 0.0087 40.1 89.0 50 1565-1614 983-1034(1164)
150 KOG1117|consensus 78.4 2.6 5.7E-05 55.0 5.1 96 2152-2267 84-179 (1186)
151 KOG0705|consensus 77.8 2.1 4.5E-05 53.4 3.9 35 2233-2267 447-481 (749)
152 COG0419 SbcC ATPase involved i 76.7 3.8E+02 0.0082 38.8 70.5 66 1520-1585 313-378 (908)
153 cd01262 PH_PDK1 3-Phosphoinosi 75.8 9.3 0.0002 36.6 6.6 86 2156-2264 2-87 (89)
154 PF04849 HAP1_N: HAP1 N-termin 74.7 2E+02 0.0044 34.7 22.3 90 820-909 95-187 (306)
155 PF13949 ALIX_LYPXL_bnd: ALIX 73.9 2.3E+02 0.0049 34.9 25.5 143 1670-1826 137-283 (296)
156 KOG0933|consensus 73.1 3.9E+02 0.0084 37.2 74.3 122 1070-1202 931-1061(1174)
157 cd01228 PH_BCR-related BCR (br 71.6 11 0.00025 36.2 6.1 75 2180-2263 18-92 (96)
158 PF07888 CALCOCO1: Calcium bin 71.0 3.4E+02 0.0074 35.7 30.3 28 887-914 169-196 (546)
159 PF15450 DUF4631: Domain of un 67.1 3.7E+02 0.0081 34.7 46.9 241 1755-2012 239-505 (531)
160 KOG2129|consensus 66.5 3.2E+02 0.0069 33.7 19.5 109 1842-1977 160-276 (552)
161 PF15404 PH_4: Pleckstrin homo 66.2 5.7 0.00012 44.0 3.6 33 2157-2197 1-33 (185)
162 KOG3000|consensus 64.4 12 0.00026 44.5 5.9 95 174-276 17-116 (295)
163 PF10498 IFT57: Intra-flagella 64.3 2.5E+02 0.0053 35.4 17.5 26 1033-1058 278-303 (359)
164 KOG0971|consensus 64.1 5.3E+02 0.011 35.4 79.1 71 1015-1085 477-548 (1243)
165 PF05622 HOOK: HOOK protein; 63.9 16 0.00036 50.8 8.3 95 172-270 7-117 (713)
166 PF04912 Dynamitin: Dynamitin 62.2 4.4E+02 0.0096 33.8 26.7 56 884-940 89-144 (388)
167 TIGR02168 SMC_prok_B chromosom 61.9 8.2E+02 0.018 36.8 90.3 8 1640-1647 977-984 (1179)
168 PF05557 MAD: Mitotic checkpoi 61.2 39 0.00084 47.3 11.2 80 1315-1398 564-646 (722)
169 KOG0516|consensus 61.2 7.8E+02 0.017 36.3 76.5 255 534-807 111-370 (1047)
170 PF15070 GOLGA2L5: Putative go 61.1 5.7E+02 0.012 34.8 40.2 406 1336-1779 2-458 (617)
171 PF06008 Laminin_I: Laminin Do 61.0 3.6E+02 0.0079 32.4 28.1 65 640-706 187-251 (264)
172 PF04849 HAP1_N: HAP1 N-termin 59.9 3.9E+02 0.0085 32.4 25.3 28 1142-1169 273-300 (306)
173 KOG2996|consensus 59.9 6.9 0.00015 48.9 3.0 68 189-256 26-101 (865)
174 COG3096 MukB Uncharacterized p 58.8 5.7E+02 0.012 33.9 70.3 67 939-1011 890-956 (1480)
175 PF15450 DUF4631: Domain of un 57.2 5.5E+02 0.012 33.3 49.4 40 999-1038 451-491 (531)
176 KOG3958|consensus 57.2 3.9E+02 0.0084 31.5 24.8 157 963-1124 192-365 (371)
177 PF05622 HOOK: HOOK protein; 56.5 9.3 0.0002 53.2 3.9 66 55-123 9-81 (713)
178 PF06008 Laminin_I: Laminin Do 55.7 4.4E+02 0.0095 31.7 29.9 35 1090-1126 118-152 (264)
179 KOG2128|consensus 55.5 39 0.00085 47.9 9.2 82 59-141 48-132 (1401)
180 PF12252 SidE: Dot/Icm substra 55.4 7.8E+02 0.017 34.6 24.3 148 1677-1829 1095-1251(1439)
181 KOG3543|consensus 54.8 5.5 0.00012 49.7 1.1 95 2157-2268 466-568 (1218)
182 PF12718 Tropomyosin_1: Tropom 54.3 3.1E+02 0.0067 29.5 15.9 60 957-1019 44-103 (143)
183 KOG4424|consensus 54.1 29 0.00064 44.3 7.1 86 2176-2270 510-600 (623)
184 COG1196 Smc Chromosome segrega 53.9 1E+03 0.023 35.5 92.1 55 1352-1406 442-497 (1163)
185 cd01227 PH_Dbs Dbs (DBL's big 53.1 75 0.0016 33.5 8.8 81 2180-2266 30-116 (133)
186 PF14643 DUF4455: Domain of un 53.0 6.8E+02 0.015 33.1 51.7 92 922-1015 59-153 (473)
187 KOG0976|consensus 52.0 7.6E+02 0.016 33.4 61.6 63 1320-1382 130-192 (1265)
188 PF14643 DUF4455: Domain of un 51.1 7.2E+02 0.016 32.9 53.7 230 774-1029 201-444 (473)
189 COG0419 SbcC ATPase involved i 51.0 1E+03 0.022 34.6 75.5 99 987-1085 313-412 (908)
190 PF09789 DUF2353: Uncharacteri 50.9 5.6E+02 0.012 31.5 20.8 125 990-1119 87-213 (319)
191 PF08317 Spc7: Spc7 kinetochor 50.7 5.9E+02 0.013 31.7 22.2 221 851-1077 70-294 (325)
192 TIGR03185 DNA_S_dndD DNA sulfu 50.0 8.8E+02 0.019 33.6 33.3 51 1178-1231 397-447 (650)
193 KOG3958|consensus 47.0 5.6E+02 0.012 30.4 26.1 162 1709-1873 192-369 (371)
194 COG1340 Uncharacterized archae 46.7 6E+02 0.013 30.7 26.1 25 892-916 30-54 (294)
195 PF03915 AIP3: Actin interacti 45.0 5.3E+02 0.011 33.2 16.1 105 1065-1195 216-322 (424)
196 KOG4807|consensus 45.0 6.6E+02 0.014 30.7 29.1 241 986-1251 288-551 (593)
197 KOG2070|consensus 43.9 39 0.00084 42.0 5.7 78 2181-2263 327-404 (661)
198 COG1340 Uncharacterized archae 43.0 6.8E+02 0.015 30.2 26.1 45 1567-1611 157-202 (294)
199 KOG4302|consensus 41.9 1.1E+03 0.023 32.2 45.7 175 1032-1238 15-193 (660)
200 PF08429 PLU-1: PLU-1-like pro 41.5 8E+02 0.017 30.7 23.2 30 863-893 2-31 (335)
201 PF15411 PH_10: Pleckstrin hom 41.2 91 0.002 32.1 7.2 85 2177-2261 19-116 (116)
202 KOG4673|consensus 41.1 1E+03 0.022 31.7 61.9 60 1529-1588 605-671 (961)
203 PHA02562 46 endonuclease subun 40.8 1.1E+03 0.024 32.0 32.5 29 1140-1168 301-329 (562)
204 PF04129 Vps52: Vps52 / Sac2 f 40.5 9.2E+02 0.02 32.2 18.4 159 1173-1333 15-187 (508)
205 KOG0250|consensus 40.2 1.3E+03 0.029 32.9 65.6 83 1409-1491 727-812 (1074)
206 PF05557 MAD: Mitotic checkpoi 39.7 1.3E+02 0.0027 42.3 10.8 91 1517-1611 552-647 (722)
207 COG5199 SCP1 Calponin [Cytoske 39.6 37 0.0008 35.2 4.0 102 173-278 14-119 (178)
208 KOG0532|consensus 39.2 14 0.00029 47.3 1.1 61 194-255 595-665 (722)
209 KOG3551|consensus 37.9 28 0.00061 41.8 3.3 100 2154-2262 291-398 (506)
210 PF15405 PH_5: Pleckstrin homo 37.6 1E+02 0.0022 32.7 7.2 34 2231-2264 99-134 (135)
211 PF04108 APG17: Autophagy prot 37.1 1E+03 0.023 30.7 34.9 66 1415-1480 191-273 (412)
212 PF13949 ALIX_LYPXL_bnd: ALIX 36.7 8.7E+02 0.019 29.7 30.9 133 1144-1289 140-276 (296)
213 PF10168 Nup88: Nuclear pore c 35.9 1.1E+03 0.023 33.0 18.2 164 1798-1980 535-711 (717)
214 KOG1924|consensus 35.7 36 0.00077 44.7 3.9 31 1948-1978 366-396 (1102)
215 PF12325 TMF_TATA_bd: TATA ele 33.5 5.4E+02 0.012 26.8 11.2 78 446-523 9-99 (120)
216 PF00038 Filament: Intermediat 33.5 1E+03 0.022 29.4 29.7 32 991-1022 218-249 (312)
217 PF11802 CENP-K: Centromere-as 33.4 8.9E+02 0.019 28.8 18.0 129 958-1093 19-151 (268)
218 PF11802 CENP-K: Centromere-as 32.6 9.2E+02 0.02 28.7 18.2 103 1089-1201 46-149 (268)
219 COG4477 EzrA Negative regulato 32.4 1.3E+03 0.027 30.3 55.8 132 1003-1158 111-242 (570)
220 PRK09039 hypothetical protein; 32.3 1.1E+03 0.024 29.6 18.0 157 789-974 44-206 (343)
221 PF12814 Mcp5_PH: Meiotic cell 31.8 2.3E+02 0.005 29.6 8.6 88 2176-2265 27-121 (123)
222 PF10498 IFT57: Intra-flagella 30.4 8.3E+02 0.018 30.8 14.5 15 860-874 192-206 (359)
223 TIGR03545 conserved hypothetic 30.3 1.5E+03 0.032 30.5 17.6 78 928-1018 164-241 (555)
224 KOG0976|consensus 28.6 1.7E+03 0.036 30.4 62.1 113 822-955 81-193 (1265)
225 PF08458 PH_2: Plant pleckstri 28.6 3.1E+02 0.0067 27.8 8.2 37 2230-2267 69-105 (110)
226 cd07662 BAR_SNX6 The Bin/Amphi 27.3 1E+03 0.022 27.6 18.2 138 1600-1746 14-169 (218)
227 PF05531 NPV_P10: Nucleopolyhe 25.9 5.7E+02 0.012 24.1 8.8 54 999-1053 7-60 (75)
228 PF05218 DUF713: Protein of un 25.4 1E+03 0.022 26.9 13.7 99 1262-1378 5-107 (182)
229 KOG3521|consensus 25.0 69 0.0015 41.6 3.8 101 2154-2270 426-531 (846)
230 PF12325 TMF_TATA_bd: TATA ele 24.8 8.1E+02 0.017 25.5 14.1 78 983-1060 10-100 (120)
231 KOG0978|consensus 24.7 2E+03 0.042 30.0 63.3 28 1030-1057 43-70 (698)
232 PF01576 Myosin_tail_1: Myosin 24.7 25 0.00054 49.8 0.0 18 1391-1408 744-761 (859)
233 TIGR03545 conserved hypothetic 24.0 1.5E+03 0.033 30.4 16.1 134 1251-1409 164-311 (555)
234 TIGR03185 DNA_S_dndD DNA sulfu 23.9 2.1E+03 0.045 30.0 39.2 61 957-1021 393-453 (650)
235 KOG0165|consensus 23.5 11 0.00023 49.0 -3.3 79 76-155 352-433 (1023)
236 smart00787 Spc7 Spc7 kinetocho 23.1 1.5E+03 0.032 28.0 26.7 110 885-1003 175-285 (312)
237 PF04065 Not3: Not1 N-terminal 22.6 4.9E+02 0.011 30.5 9.7 86 1145-1231 19-107 (233)
238 PF01576 Myosin_tail_1: Myosin 22.4 29 0.00063 49.1 0.0 25 1464-1488 604-628 (859)
239 COG4477 EzrA Negative regulato 21.8 1.9E+03 0.041 28.8 47.9 162 611-783 285-449 (570)
240 PF05769 DUF837: Protein of un 21.4 1.2E+03 0.026 26.3 19.2 60 1098-1161 117-176 (181)
241 COG1579 Zn-ribbon protein, pos 21.0 1.4E+03 0.03 26.9 24.2 120 1355-1488 30-150 (239)
242 COG5261 IQG1 Protein involved 21.0 1.4E+02 0.0029 40.3 5.4 81 59-140 50-132 (1054)
243 COG4942 Membrane-bound metallo 20.5 1.9E+03 0.04 28.2 24.5 71 1091-1169 139-213 (420)
244 KOG1264|consensus 20.5 1.4E+02 0.003 39.9 5.2 53 2213-2265 855-910 (1267)
245 KOG3520|consensus 20.4 2.8E+03 0.061 30.3 19.4 86 2180-2270 637-726 (1167)
246 PF00261 Tropomyosin: Tropomyo 20.4 1.4E+03 0.031 26.8 27.8 19 997-1015 142-160 (237)
247 PHA02562 46 endonuclease subun 20.3 2.2E+03 0.048 29.0 33.1 19 1150-1168 335-353 (562)
248 PF07106 TBPIP: Tat binding pr 20.0 8.7E+02 0.019 26.9 11.1 89 1063-1168 80-168 (169)
No 1
>KOG0517|consensus
Probab=100.00 E-value=0 Score=3802.20 Aligned_cols=2270 Identities=60% Similarity=0.939 Sum_probs=2179.1
Q ss_pred CCcccCCCCCCchhhhHhhhhhhhHHHHHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCC
Q psy18058 24 EDYEYDGGNSSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTK 103 (2301)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~ 103 (2301)
..++||++++++++||+||||+|+|+|+.|||||||+||||||..++|+|.|||+||+||++|++|||+|||+.||+|++
T Consensus 19 ~~~~~d~~nssa~lFErsRIKaLadERe~vQKKTFTKWvNShL~rv~c~I~DLy~DlrDG~~LlkLLEvlSGE~LpkPtr 98 (2473)
T KOG0517|consen 19 RWDDPDNDNSSARLFERSRIKALADEREAVQKKTFTKWVNSHLARVSCRIGDLYTDLRDGIMLLKLLEVLSGERLPKPTR 98 (2473)
T ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcchhHHHHHHHhhhHHHHHHHHHHccccCCCCCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHhhHHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccccccccccHHHHHHHHHHh
Q psy18058 104 GKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQM 183 (2301)
Q Consensus 104 ~~~~~~~~~N~~~al~~~~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~~~~~~~~~~~~ll~W~~~ 183 (2301)
|+|||||+|||++||+||+..+|+|.||||+||||||+++|||||||||++|||++|++++.++.++.|+|++||.|||+
T Consensus 99 GRMRIH~LENvdKaLqFLkeqkVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie~edn~E~rSAKDALLLWCQm 178 (2473)
T KOG0517|consen 99 GRMRIHCLENVDKALQFLKEQKVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIETEDNRETRSAKDALLLWCQM 178 (2473)
T ss_pred CceeehhHhhhHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEeecccchhhhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccCccCHHHHHHHHHHHHHHhcCCccccccccccccCCChhh
Q psy18058 184 KTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKS 263 (2301)
Q Consensus 184 ~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~~~~~de~s 263 (2301)
+|+|||||+|+||||||+||+|||||||+||||+|||+++.++++.+|+++||++|+++|||++|||||||.+..|||||
T Consensus 179 KTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~LGia~LLDpEDV~v~~PDEKS 258 (2473)
T KOG0517|consen 179 KTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQELGIAKLLDPEDVNVEQPDEKS 258 (2473)
T ss_pred hccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHcCchhcCCHhhcCccCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcchhhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHh
Q psy18058 264 IITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFN 343 (2301)
Q Consensus 264 i~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~ 343 (2301)
|||||+.|||||++||..++.|+|||||++++|++++|+.+|+.++++||.||+.++..|++++|||||+|||+++++|+
T Consensus 259 IITYV~~YYHyFsKmK~~~v~gKRIgkVl~~lme~ekm~~~YE~LasdLL~WI~~ti~~L~~R~f~NSL~GvqqqL~aF~ 338 (2473)
T KOG0517|consen 259 IITYVVTYYHYFSKMKQLAVEGKRIGKVLDQLMETEKMIEQYEGLASDLLEWIEQTIQTLESRKFPNSLEGVQQQLAAFN 338 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCchhhhhhHHHHHHHHHHHHHhcCCCCCCCCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 344 NYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAA 423 (2301)
Q Consensus 344 ~~~~~ek~~~~~e~g~le~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~W~~Le~~~~~r~~~L~~el~r~e~le~l~~ 423 (2301)
.|||.||||||+|||+||+++|+|+|+|+++|++||+|++|+.|+|||++|+.||+|+|+|+.+|+.+|+||+|||+||.
T Consensus 339 ~yRT~EKPPKf~EKG~lEvLlFtiQsklrA~Nqk~y~P~eG~li~DInkAW~~LE~AEheRe~ALr~ELiRQEKLEqLA~ 418 (2473)
T KOG0517|consen 339 TYRTVEKPPKFQEKGNLEVLLFTIQSKLRANNQKPYTPREGKLISDINKAWERLEKAEHERELALRAELIRQEKLEQLAR 418 (2473)
T ss_pred hhhcccCCCccccccchHHHHHHHHHHHHHcCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHhhhhhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q psy18058 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKEN 503 (2301)
Q Consensus 424 rf~~~a~~~e~Wl~e~~~~l~~~~~g~dl~~v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~~~~~~~~~i~~r~~~ 503 (2301)
||++||+|+++||++++++|++++||.|+++|++.++||++|++||.+|++||++|..+|++|..++||+..+|..|.++
T Consensus 419 RFdrKAamREtwL~enqrlvsqdnfg~~LaaVEAa~KKheAIetDI~AyeeRvqal~ava~eL~~E~YHd~~rV~~r~~~ 498 (2473)
T KOG0517|consen 419 RFDRKAAMRETWLKENQRLVSQDNFGYDLAAVEAALKKHEAIETDILAYEERVQALVAVADELEAENYHDIKRVAARKDN 498 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHHHhHHHHHHHHHHHHH
Q psy18058 504 VLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVK 583 (2301)
Q Consensus 504 l~~~W~~L~~~~~~R~~~Le~~l~l~~~~~e~~~l~~Wl~e~~~~l~s~~~g~dl~~v~~ll~kh~~l~~di~~~~~~v~ 583 (2301)
|.++|.+|.+++..||.+|+.++.+++.|++|.++++||++++..+.|.++|+||.+|+++|++|..++++|.+++++|.
T Consensus 499 V~~~W~~Ll~lL~arR~rL~~~~~Lqklfqem~~~~d~meElk~~l~S~d~GkHL~gVedLLQkH~LlEadIn~~gerv~ 578 (2473)
T KOG0517|consen 499 VLRLWTYLLELLEARRQRLEQMLALQKLFQEMLYTSDWMEELKQQLLSRDVGKHLLGVEDLLQKHDLLEADINAQGERVK 578 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHhhhhHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhc
Q psy18058 584 SVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVST 663 (2301)
Q Consensus 584 ~l~~~a~~l~~~~~~~~~~~~~~~~i~~~l~~L~~~~~~L~~~~~~R~~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~ 663 (2301)
.++..+.+|. .+.++.||+|.+|+.++..|..+|++|+.++..|+.+||+++.+|+|++++++.++||.++++++++
T Consensus 579 ~~~a~a~~f~---~~~~~~~cdp~vi~~R~~~le~~y~eL~~laa~RRarLE~sr~l~~F~~d~~EeEaWlkEkeqi~~s 655 (2473)
T KOG0517|consen 579 ALNAQALRFD---SPKEYKPCDPQVIQERVAHLEQCYQELVELAAARRARLEESRRLWQFLWDVEEEEAWLKEKEQILSS 655 (2473)
T ss_pred HHHHHHhhcC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999998 4567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 664 GDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEA 743 (2301)
Q Consensus 664 ~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a 743 (2301)
.++|+|+++|..++.|||+|+.||.++.+.+..+...|..|+..+||+++.|+.++.+++.+|+.|..++..|+.+|++|
T Consensus 656 a~~g~DLs~v~~ll~kHKalE~E~~~~~a~~~~~~~~G~~Lvae~~pg~~~i~~R~~~i~~~W~~L~~l~~~r~~rL~~A 735 (2473)
T KOG0517|consen 656 ADTGRDLSSVLRLLQKHKALEDEMRGRDAHLKQMIREGEELVAEGHPGSDQIQERAAEIREQWQRLEALVAGRGRRLQEA 735 (2473)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhccCCCCChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcCCCCCChhHHH-
Q psy18058 744 VDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLE- 822 (2301)
Q Consensus 744 ~~~~qf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~v~~- 822 (2301)
..++|||.|++++.+||.++.+.+++.|+|.|+.+++.++++|.+|..||.+|.+.|..|.+++.+|+...++.|+|..
T Consensus 736 ~~~~QffaDAdd~~sWl~d~~rlvss~d~G~DE~saq~LlkrH~~l~~El~a~~~~i~~L~eQa~~l~~~~~e~p~V~~~ 815 (2473)
T KOG0517|consen 736 RELYQFFADADDAESWLRDALRLVSSEDVGHDEASAQALLKRHRDLEEELRAYRGDIDRLEEQASALPQESPEGPEVRQP 815 (2473)
T ss_pred HHHHHHhccHHHHHHHHHHHHHhccchhcCCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccccCCCcccccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhh
Q psy18058 823 --RLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNA 900 (2301)
Q Consensus 823 --~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~ 900 (2301)
++..+.+.|..|.+++..|++.|++++.+|.||++|+.|+.||.+++.+|..+.||.+++++++++++|+.|..+|+.
T Consensus 816 ~~R~~~i~q~Y~El~~lA~lRrq~L~dalaLy~~~se~d~~ElWi~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~eM~~ 895 (2473)
T KOG0517|consen 816 LQRQDTISQDYEELQELAQLRRQRLEDALALYGFYSECDACELWIKEKEKWLATMSPPDSLEDVEVMQHRFEKLEQEMNT 895 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhcc
Q psy18058 901 NASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQS 980 (2301)
Q Consensus 901 ~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~ 980 (2301)
..++|..||.++++|+..+||++++|..+++.||.+|.+|..++.+++..|++++.++.|+.+|.++..||.+|...+.+
T Consensus 896 ~~~~v~~Vn~~a~qL~~~ghp~sd~I~~~Q~~Ln~rW~~l~~l~~qk~~~L~~a~~V~~f~~eC~et~~wi~dK~~~~e~ 975 (2473)
T KOG0517|consen 896 LAGRVAEVNDIARQLLEVGHPNSDEILARQDKLNQRWQQLRELVDQKKVALESALRVETFHLECEETRVWIRDKTRVLES 975 (2473)
T ss_pred hhhhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 981 TDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060 (2301)
Q Consensus 981 ~~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~ 1060 (2301)
++++|+|+.+|+++++++..+++++.++++++..|...|..+...+|..+..|..++.+|+..|..|...+.+|...+++
T Consensus 976 t~~~~~Dl~gv~alqrrL~~lErdl~aie~kv~~L~~ea~~v~~~~Paea~~i~~r~~el~~~w~~l~~~~~~~~~~l~e 1055 (2473)
T KOG0517|consen 976 TDRLGNDLAGVMALQRRLQGLERDLAAIEAKVAALEKEANKVEEEHPAEAQAINARIAELQALWEQLQQRLQEREERLEE 1055 (2473)
T ss_pred ccccCcchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhh
Q psy18058 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQY 1140 (2301)
Q Consensus 1061 a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~ 1140 (2301)
+..++.|+.++++|..|+..++..+.+++.|.|+++|+.+|.+|.++.++|+.+++.|..+...|+.+. .|.++|++
T Consensus 1056 a~~lQ~Fl~dld~f~~Wl~~tq~~~~see~p~~l~eAe~LL~qH~~l~eEI~~~~e~y~~~~~~ge~~~---~g~~~p~~ 1132 (2473)
T KOG0517|consen 1056 AGGLQRFLRDLDDFQAWLESTQTQVASEEGPVDLAEAEQLLKQHAALREEIDGYQEDYQRMRALGETVA---DGQTDPQY 1132 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh---ccCCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999887 45677999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy18058 1141 MFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTT 1220 (2301)
Q Consensus 1141 ~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~ 1220 (2301)
..|.++|..|.+.|+.|..+|+.|+..|.+++.+|.|.+|+++++..++++|.+|+.+++|+|+++++++|++|++|..+
T Consensus 1133 ~~l~erL~~L~~gw~eL~~mWe~Rq~~L~Q~l~lQ~F~Rda~q~ea~l~~qE~~L~~d~lp~sle~ae~~LKrh~DF~~t 1212 (2473)
T KOG0517|consen 1133 LFLRERLQALGTGWEELHRMWENRQKWLSQGLDLQLFLRDARQAEATLSNQEAFLSHDNLPDSLEEAEALLKRHRDFLTT 1212 (2473)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhh
Q psy18058 1221 MEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFT 1300 (2301)
Q Consensus 1221 l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~ 1300 (2301)
|+++.+++..+..+|++|+..+|++++.|.++.+.|..||.++..++.+|..+|.+++++|+|.++|+|+..||.||+.+
T Consensus 1213 m~a~~~ki~a~~~~gd~Lv~~~h~~s~~I~ek~~~I~~r~~~nr~rA~q~~~~L~~slelQ~flqd~~EL~~Wi~EK~l~ 1292 (2473)
T KOG0517|consen 1213 MDANDEKIEALVDTGDKLVSEGHIDSDKIREKAQSILARRKANRERAQQRLRKLKDSLELQEFLQDCDELKLWIEEKMLM 1292 (2473)
T ss_pred HhcchHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchhhhHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1301 AQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLF 1380 (2301)
Q Consensus 1301 ~~~~~~~d~~~l~~~l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~ 1380 (2301)
+.|++|+++.+|+.+|.||++|++||.+|+++++.|.+.|+.|+.++|+..+.|..+|.+|+.+|++|..++.+|+++|+
T Consensus 1293 a~Desy~~~~nl~~k~~kHqAFeaELaank~~l~~i~~eG~~L~~ekpe~~~~V~~kl~~L~~~W~~Le~~t~~Kg~~L~ 1372 (2473)
T KOG0517|consen 1293 AQDESYRDARNLHSKWLKHQAFEAELAANKEWLEKIEKEGQELVSEKPELKALVEKKLRELHKQWDELEKTTQEKGRKLF 1372 (2473)
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHH
Q psy18058 1381 DSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEI 1460 (2301)
Q Consensus 1381 ~a~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i 1460 (2301)
+|.+...|.+++.|+.+||+++|.+|.+.|+|+||.+|+.+|+||+.++.+|..+...|..|.+++..|...+| +++.|
T Consensus 1373 qA~~q~~~~qs~~D~~~~l~~le~qL~S~D~G~DL~Svn~llkKqq~lEsem~~~~~kv~el~s~~~~ma~~~~-~a~~I 1451 (2473)
T KOG0517|consen 1373 QANRQELLLQSLADAKKKLDELESQLQSDDTGKDLTSVNDLLKKQQVLESEMEVRAQKVAELQSQAKAMAEEGH-SAENI 1451 (2473)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccCc-chhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccccCcccCCCHHHHHHHHHHHHHHHHHHhc
Q psy18058 1461 VVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN 1540 (2301)
Q Consensus 1461 ~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~~~~Wl~e~~~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~ 1540 (2301)
......+.+||..|++|+.+|+..|+++..+|||.+|+++++.||.|++|.++|++||.+|.+|+.+.+||+.|++||.+
T Consensus 1452 ~~~~~~v~~Rf~~L~~Pl~~R~~~Le~S~e~hQf~~dvddE~~WV~ErlP~A~s~d~G~~L~~~q~l~KK~q~Lq~EI~~ 1531 (2473)
T KOG0517|consen 1452 EETTLAVLERFEDLLGPLQERRKQLEASKELHQFVRDVDDELLWVAERLPLASSTDYGENLQTVQSLHKKNQTLQAEIKG 1531 (2473)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhCccCCchhhccChHHHHHHHHHhHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHhhhhhcc
Q psy18058 1541 HEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMV 1620 (2301)
Q Consensus 1541 ~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~qqf~~~~~e~~~Wl~e~~~~l~~ 1620 (2301)
|+|+|+.|+..|+.||..+|++++.|..++.+|+..|..|...+..|++.|+.++++||||.|+.|+++||.|++.+|++
T Consensus 1532 H~prI~~vl~~gq~Li~~~h~~a~~i~~~~~eLe~aW~eL~~a~e~R~~~L~~a~kaQQY~fDaaE~EaWm~Eqel~m~s 1611 (2473)
T KOG0517|consen 1532 HQPRINDVLERGQSLIDSGHPEAEAIEEKLQELESAWQELKEACELRRQRLDEAVKAQQYYFDAAEAEAWMGEQELYMMS 1611 (2473)
T ss_pred cchHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1621 EDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEA 1700 (2301)
Q Consensus 1621 ~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~ 1700 (2301)
+++|+|+.++..+|+||+.++++|+.|..+|.+|..+|+.|+..+||+++.|..++++|++.|..|++++++|+.+|+++
T Consensus 1612 ee~gkDE~sa~~llkKH~~Le~~v~~Y~~~i~qL~~~~~~lv~~~hP~~eri~~rQ~qldkly~~Lk~LA~eRr~~Lee~ 1691 (2473)
T KOG0517|consen 1612 EEYGKDEDSALKLLKKHQALEQEVEDYAQTIEQLAQKAQALVEANHPESERISRRQSQLDKLYAGLKDLAEERRRRLEET 1691 (2473)
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHcCCCChHHHH
Q psy18058 1701 LKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIA 1780 (2301)
Q Consensus 1701 ~~~~qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~~k~~~f~~e~~~~~~~rv~~v~~~~~~L~~~~~~~~~~I~ 1780 (2301)
+.+|+|.++++||++||.+++++|+|+++|+|++||+.|++||.+|.++++.+|.+||++||.+|+.||..||+++++|.
T Consensus 1692 l~L~el~RE~dDLeqWIae~e~vAgS~elGqD~EHv~~Lq~KF~eFa~~te~iG~eRv~~~n~la~~LI~~ghs~a~tva 1771 (2473)
T KOG0517|consen 1692 LRLYELSREVDDLEQWIAEKEVVAGSEELGQDFEHVTLLQEKFREFARDTEAIGSERVAACNLLADELIERGHSAAATVA 1771 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhcCChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHHHHhhhCccccCCCcchHHHHHHHHHHHHHHHHHHH
Q psy18058 1781 EWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQ 1860 (2301)
Q Consensus 1781 ~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ek~~~l~~~~g~d~~~v~~l~rkh~~~e~el~~~~ 1860 (2301)
+|.++||+.|++|++++++|.+.|.++.++|+||+||.+++.||++|...||+++|.|+.+|.+++|+|.+|++||.+++
T Consensus 1772 ewkd~LneaW~~LlELi~tR~q~Laas~elhrf~~D~~E~l~riqeK~~~lp~~lgRD~~s~~al~R~H~~fe~dl~~l~ 1851 (2473)
T KOG0517|consen 1772 EWKDGLNEAWADLLELIDTRGQKLAASRELHRFHRDAREVLGRIQEKQAALPDDLGRDLNSAEALQRKHEAFEHDLVALE 1851 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhCchhhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy18058 1861 SQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTS 1940 (2301)
Q Consensus 1861 ~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~dl~~Wl~~~~~~~~~~ 1940 (2301)
++|+++++.|.+|+..|||++|+.|..++++|..+|..|+..|+.|+.+|.++.++++||++||||++||+++..+|.+.
T Consensus 1852 ~Qvqql~e~a~rLq~~YaG~kA~aI~~reqeV~qaW~~L~~~~~~Rr~~L~~t~Dl~rF~~~VRDllsWmd~v~~qiqa~ 1931 (2473)
T KOG0517|consen 1852 PQVQQLQEDAARLQKAYAGDKAEAIQQREQEVLQAWAELQGACEARRDRLADTSDLFRFFSMVRDLLSWMDEVIRQIQAQ 1931 (2473)
T ss_pred HHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1941 EKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLIL 2020 (2301)
Q Consensus 1941 e~~~d~~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~s~eI~~~l~~L~~~~~~l~~~w~~r~~~L~~~~ 2020 (2301)
+.|+||++++.+|..|+.+++||++|.+.|..|+++|++|+.++||+|+||++++..|..++++|...|+.||++|++.+
T Consensus 1932 e~prDvss~ellm~~Hq~lkaEieARe~~f~~c~eLG~~lL~~~hyas~EI~ekl~~L~~~r~e~~~~W~~r~e~Lq~~l 2011 (2473)
T KOG0517|consen 1932 ERPRDVSSVELLMNNHQGLKAEIEAREDNFSACIELGKSLLLRKHYASEEIKEKLRALQDRREELYEKWERRWEWLQQIL 2011 (2473)
T ss_pred cCCCcchhHHHHHHHhHHHHHHHHhccHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHhccccccCcCCCCChHHHHHHHHhHHHHHHHHHchHHhHHHHHhhhHHHHHhhhhhhH-----
Q psy18058 2021 EVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKE----- 2095 (2301)
Q Consensus 2021 ~~~~f~~d~~~~e~Wl~~~e~~l~~~~~g~s~~~ve~li~~h~~fek~~~~q~ek~~~l~~~t~~~~~~~~~~~~----- 2095 (2301)
++++|.|||.++++||.++||+|.|.++|.||++||+|||||++|+|+++||+|||++|+++||+|+.+.+.+..
T Consensus 2012 ev~~F~RdA~~aeawl~aQep~L~S~elG~sVdeVE~lIkrHEaFeKs~~a~eERfsaLerltt~el~e~r~~~~~~l~~ 2091 (2473)
T KOG0517|consen 2012 EVHQFARDAKVAEAWLIAQEPYLRSSELGSSVDEVEKLIKRHEAFEKSAAAQEERFSALERLTTLELIEARHRESTLLQR 2091 (2473)
T ss_pred HHHHHHHHHHHHHHHHHhchhHhhHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999877543331
Q ss_pred ----------------------------HHHHHhhhhhhcC--CCCCC-------------CC---C----CCcccc---
Q psy18058 2096 ----------------------------EEERKRQEELAAK--QTPPT-------------SP---D----QSAKDR--- 2122 (2301)
Q Consensus 2096 ----------------------------~~~~~~~~~~~~~--~~~~~-------------~~---~----~~~~~~--- 2122 (2301)
++...+.++.+.+ +.|.. +. . ...|..
T Consensus 2092 ~~r~k~~~~~r~~~l~~a~~~asf~~~~~e~~~~~~~~~~~~~~v~~~~~~~~~~~~qa~~aevqa~~~~~~~i~~rg~~ 2171 (2473)
T KOG0517|consen 2092 RMRVKELAESRGHALHDALLMASFTQWIEEKAKRQPPAPESSESVPLDEKAKTLQKHQAFEAEVQANAPVVQEIPRRGEL 2171 (2473)
T ss_pred hhhhhhHHhhhhhHHHHHHHhhhHHHHHhhhhcccCCCcccCCCCCcchhhHHHHhhcccccchhccchhhhhhhhhhhH
Confidence 1222222222211 11100 00 0 000000
Q ss_pred ---cCCc-------------------------------------------------cccccc------------------
Q psy18058 2123 ---LDGE-------------------------------------------------EVKDKE------------------ 2132 (2301)
Q Consensus 2123 ---~~~~-------------------------------------------------~~~~~~------------------ 2132 (2301)
.+++ ++.+.+
T Consensus 2172 ~~~~~~s~~~~~r~~~~~~~w~~l~~a~a~~~~~lEe~~~~lef~q~~~~~~awi~~ke~~~~~~d~Gkd~ehc~~l~~~ 2251 (2473)
T KOG0517|consen 2172 AKSHDRSEEIARRLQGLRKHWEDLRAAMALRGQELEEARDFLEFGQRVDEAEAWIEEKEVKVGDGDLGKDLEHCLQLPRR 2251 (2473)
T ss_pred hhcCCccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhccccccccchhcchhHHHHHHHHhh
Confidence 0000 000000
Q ss_pred --------ccc----cchh-------hhcccCCC------CCCCCCccceEeEecceeeeccCCccCCCCCCceEEEEEe
Q psy18058 2133 --------KEG----ESRQ-------EKQARGER------PTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLR 2187 (2301)
Q Consensus 2133 --------~~~----~~~~-------~~~~~~~~------~~~~~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~ 2187 (2301)
+.+ .++. -..+.|+. +..|+....++|+|+||+.+.+-++++.+|+|.++||+++
T Consensus 2252 l~~~r~~~~v~~~~~~~i~~l~~kL~n~~~~p~~~~~~~r~~~~~~w~~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~ 2331 (2473)
T KOG0517|consen 2252 LRETRSDSPVDDQCPQSINDLSLKLKNQATLPARTQEQDRSRLNSAWRQLEGFLYRKHLLGALEIKASNRSWDNVYCRIR 2331 (2473)
T ss_pred hhcccCCCCCcccccchhhhhhhhhcccCCCCccccccccccCCcHHHHHHhHHHHHHHHhhhhhhhhcccHHHHHHHHH
Confidence 000 0000 01223322 1224555578999999999999999999999999999999
Q ss_pred CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2188 GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2188 ~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
.+.+.||||.+...+++...+++++++++..|.|.++.||+||+|||.|.+++|.+|+|+|.++++|.+|++++..+++.
T Consensus 2332 e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~dy~kkk~v~~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~~ 2411 (2473)
T KOG0517|consen 2332 EKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVASDYHKKKHVFLLQLPPGAEHLLQAKDEEEMESWLRALAVKRAE 2411 (2473)
T ss_pred hccchhhcccCcccccchhhccCCcchhcchhHHHHHHHHHHHhHhhhhcCCchHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 99999999999776666678899999999999999999999999999999999999999999999999999999877751
Q ss_pred hcC-------------CCCCCCCcCCccccc----------------CCCcccccccccccC
Q psy18058 2268 QAS-------------GGPSSRSQTLPAAEM----------------RKDEPKRRSFFTLKK 2300 (2301)
Q Consensus 2268 ~~~-------------~~~~~~~~~~p~~~~----------------~~~~~~r~~~~~~~~ 2300 (2301)
..+ .....++.|+|++++ -.+++++||+|++++
T Consensus 2412 ~lk~~~~~~e~~~~a~~~~a~~~~t~pp~~~~~~~~~~~~~~e~k~e~~~r~~~~sl~~~~g 2473 (2473)
T KOG0517|consen 2412 ALKLSDDVKELEVWANAVRASMSQTLPPSSSNDARKGLEFHQERKAEIDGREKRFSLLKKTG 2473 (2473)
T ss_pred HhhhhhhHHHhhhhHHHHHHHhhcCCCCCCCchhhhchhhhhhhhhhhhhhHHHHHhhhcCC
Confidence 111 111334455555321 256788999998864
No 2
>KOG0517|consensus
Probab=100.00 E-value=9e-152 Score=1432.48 Aligned_cols=1947 Identities=22% Similarity=0.348 Sum_probs=1712.9
Q ss_pred HHHHHHHHHHccccC-CCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCCCCchhHHHhhHHHHHHHHH-hcccccccC
Q psy18058 54 QKKTFQKWVNSHLVR-VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLR-EQRVHLENM 131 (2301)
Q Consensus 54 q~~~f~~W~n~~l~~-~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~~~~~~~~~~N~~~al~~~~-~~~~~l~~i 131 (2301)
=|.++.-||.-.-.. ++++|+|+.+.++||+-+-.||-.=.|+-+...+-. .-..+.|++.|++... ..||.- -.
T Consensus 168 AKDALLLWCQmKTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~--k~na~~NL~~AFdvAE~~LGia~-LL 244 (2473)
T KOG0517|consen 168 AKDALLLWCQMKTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLK--KSNALYNLQHAFDVAEQELGIAK-LL 244 (2473)
T ss_pred HHHHHHHHHHhhccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccC--CCchhhHHHHHHHHHHHHcCchh-cC
Confidence 367889999984433 346799999999999999999998777665432211 2345889999999997 478753 37
Q ss_pred CcccccCCcc--hhhHHHHHHHHhhhh-----------hccccc---ccc---cccccccHHHHHHHHHHhHhcCCCCcc
Q psy18058 132 GSHDIVDGNP--RLSLGLIWTIILRFQ-----------IQDITI---EET---DNQETKSAKDALLLWCQMKTAGYHNVN 192 (2301)
Q Consensus 132 ~~~di~~g~~--~~~Lgliw~ii~~~~-----------~~~~~~---~~~---~~~~~~~~~~~ll~W~~~~~~~~~~~~ 192 (2301)
.|+||.--+| |.|+.-+-+.+-+|. |..|.. ++. ..++ +--.-||.|+..++.. ++
T Consensus 245 DpEDV~v~~PDEKSIITYV~~YYHyFsKmK~~~v~gKRIgkVl~~lme~ekm~~~YE--~LasdLL~WI~~ti~~---L~ 319 (2473)
T KOG0517|consen 245 DPEDVNVEQPDEKSIITYVVTYYHYFSKMKQLAVEGKRIGKVLDQLMETEKMIEQYE--GLASDLLEWIEQTIQT---LE 319 (2473)
T ss_pred CHhhcCccCCCcchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH---Hh
Confidence 8888865554 888877777776664 111100 000 0111 1223599999876543 34
Q ss_pred cccCCCCccchhhHHHHHhhhCCCCccccccCccCHHHHHHHHHHHHHHhcCCccccccccccccCCChhhHHHHHHHHH
Q psy18058 193 VRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYY 272 (2301)
Q Consensus 193 v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~~~~~de~si~~yv~~~~ 272 (2301)
=..|..|..-=.--.+=.+.||.-- .+.+|...+..+-+=+-+..+-+..+-+++..++... |+-+-
T Consensus 320 ~R~f~NSL~GvqqqL~aF~~yRT~E-KPPKf~EKG~lEvLlFtiQsklrA~Nqk~y~P~eG~l------------i~DIn 386 (2473)
T KOG0517|consen 320 SRKFPNSLEGVQQQLAAFNTYRTVE-KPPKFQEKGNLEVLLFTIQSKLRANNQKPYTPREGKL------------ISDIN 386 (2473)
T ss_pred hccCccchHHHHHHHHHHHhhhccc-CCCccccccchHHHHHHHHHHHHHcCCCCCCCCccch------------HHHHH
Confidence 4556666543333333344454211 2345555565665556666565666666666555432 22222
Q ss_pred HHhhhcchhhhhhcchh--hhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhhhhhccC
Q psy18058 273 HYFSKMKQETVQGKRIG--KVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEK 350 (2301)
Q Consensus 273 ~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~~~~~~ek 350 (2301)
.+...+.... ..+.++ .=+-..--.+.+...|.+.+..-..|+.+....++..+||.+|..|.+.+.++....+..-
T Consensus 387 kAW~~LE~AE-heRe~ALr~ELiRQEKLEqLA~RFdrKAamREtwL~enqrlvsqdnfg~~LaaVEAa~KKheAIetDI~ 465 (2473)
T KOG0517|consen 387 KAWERLEKAE-HERELALRAELIRQEKLEQLARRFDRKAAMRETWLKENQRLVSQDNFGYDLAAVEAALKKHEAIETDIL 465 (2473)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHhhhhhhhHH
Confidence 2223322211 111111 0001112356778899999999999999999999999999999999999999987766533
Q ss_pred CCchhhh-hhHHHHHHHHHHHHHhcCCCCCCCCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 351 PPKFVEK-GNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARFNRKA 429 (2301)
Q Consensus 351 ~~~~~e~-g~le~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~W~~Le~~~~~r~~~L~~el~r~e~le~l~~rf~~~a 429 (2301)
| +.++ ..+.++ ..-+.+.|=+. ...+...-.++-..|..|-.....|-..|..-+.-|. ..+..
T Consensus 466 A--yeeRvqal~av----a~eL~~E~YHd-~~rV~~r~~~V~~~W~~Ll~lL~arR~rL~~~~~Lqk--------lfqem 530 (2473)
T KOG0517|consen 466 A--YEERVQALVAV----ADELEAENYHD-IKRVAARKDNVLRLWTYLLELLEARRQRLEQMLALQK--------LFQEM 530 (2473)
T ss_pred H--HHHHHHHHHHH----HHHHHHhccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHH
Confidence 2 1111 122222 23344443211 1122333456678999999888888777755553333 34455
Q ss_pred hhHHHHHHHhhhhhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhHHHHHHHHHHH
Q psy18058 430 SMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAE---KYHDIDRINARKENVLR 506 (2301)
Q Consensus 430 ~~~e~Wl~e~~~~l~~~~~g~dl~~v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~~---~~~~~~~i~~r~~~l~~ 506 (2301)
.-..+||.+.+..+-+.++|..+..|+.+++||.-++.||.++.++|..++..+..+.+. +|-+...|+.|+..|..
T Consensus 531 ~~~~d~meElk~~l~S~d~GkHL~gVedLLQkH~LlEadIn~~gerv~~~~a~a~~f~~~~~~~~cdp~vi~~R~~~le~ 610 (2473)
T KOG0517|consen 531 LYTSDWMEELKQQLLSRDVGKHLLGVEDLLQKHDLLEADINAQGERVKALNAQALRFDSPKEYKPCDPQVIQERVAHLEQ 610 (2473)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHhhhhHHhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 566799999999999999999999999999999999999999999999999999998763 23378899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy18058 507 LWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVV 586 (2301)
Q Consensus 507 ~W~~L~~~~~~R~~~Le~~l~l~~~~~e~~~l~~Wl~e~~~~l~s~~~g~dl~~v~~ll~kh~~l~~di~~~~~~v~~l~ 586 (2301)
+|+.|+.++..||.+||.+..+++|++++.+..+|+.+.++.+.+.++|+|+..|-.++++|+.|+.+|..+.+....+.
T Consensus 611 ~y~eL~~laa~RRarLE~sr~l~~F~~d~~EeEaWlkEkeqi~~sa~~g~DLs~v~~ll~kHKalE~E~~~~~a~~~~~~ 690 (2473)
T KOG0517|consen 611 CYQELVELAAARRARLEESRRLWQFLWDVEEEEAWLKEKEQILSSADTGRDLSSVLRLLQKHKALEDEMRGRDAHLKQMI 690 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhcCCC
Q psy18058 587 QQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDI 666 (2301)
Q Consensus 587 ~~a~~l~~~~~~~~~~~~~~~~i~~~l~~L~~~~~~L~~~~~~R~~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~~~~ 666 (2301)
..|..|+..+ ++..+.|+.|+..+..+|+.|..++..|+.+|+++..++||+.|++++.+||.++-+++++.|+
T Consensus 691 ~~G~~Lvae~------~pg~~~i~~R~~~i~~~W~~L~~l~~~r~~rL~~A~~~~QffaDAdd~~sWl~d~~rlvss~d~ 764 (2473)
T KOG0517|consen 691 REGEELVAEG------HPGSDQIQERAAEIREQWQRLEALVAGRGRRLQEARELYQFFADADDAESWLRDALRLVSSEDV 764 (2473)
T ss_pred HHHHHHHhcC------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhccchhc
Confidence 9999999432 2344579999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCChhhHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 667 GHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRG---RLQDTMAMWQNLLDLAAFRRKRLEEA 743 (2301)
Q Consensus 667 g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~---~l~~l~~~w~~L~~~~~~R~~~Le~a 743 (2301)
|.|-.+++.++++|..|+.||.++.+.+..|.+.+..|....+ ..+.|.. ++..+.+.|..|..++..|+++|+++
T Consensus 765 G~DE~saq~LlkrH~~l~~El~a~~~~i~~L~eQa~~l~~~~~-e~p~V~~~~~R~~~i~q~Y~El~~lA~lRrq~L~da 843 (2473)
T KOG0517|consen 765 GHDEASAQALLKRHRDLEEELRAYRGDIDRLEEQASALPQESP-EGPEVRQPLQRQDTISQDYEELQELAQLRRQRLEDA 843 (2473)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccccC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999977533 3344554 99999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhccCCCCChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcC-CCCCChhHHH
Q psy18058 744 VDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGD-QDKESPEVLE 822 (2301)
Q Consensus 744 ~~~~qf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~-~~~~~~~v~~ 822 (2301)
+.++.||.+|++++.||.+++..+....+|.+++.++....++..|..++++..+.+..++..+..|.. +||.+..|..
T Consensus 844 laLy~~~se~d~~ElWi~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~eM~~~~~~v~~Vn~~a~qL~~~ghp~sd~I~~ 923 (2473)
T KOG0517|consen 844 LALYGFYSECDACELWIKEKEKWLATMSPPDSLEDVEVMQHRFEKLEQEMNTLAGRVAEVNDIARQLLEVGHPNSDEILA 923 (2473)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCCCChHHHHH
Confidence 999999999999999999999999998888999999999999999999999999999999999999976 7888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcccCC-CCChhHHHHHHHhhhhhHHHHhhh
Q psy18058 823 RLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVP-GKDIEDVEIMKHRYDGFDKEMNAN 901 (2301)
Q Consensus 823 ~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~Wl~e~e~~l~~~~~-~~~~e~~~~l~~~~~~l~~el~~~ 901 (2301)
+.+.|+.+|..|..+...|+..|+.++.+..|..+|++...||.++...+.+.++ |.|+..+..+++++..++.++...
T Consensus 924 ~Q~~Ln~rW~~l~~l~~qk~~~L~~a~~V~~f~~eC~et~~wi~dK~~~~e~t~~~~~Dl~gv~alqrrL~~lErdl~ai 1003 (2473)
T KOG0517|consen 924 RQDKLNQRWQQLRELVDQKKVALESALRVETFHLECEETRVWIRDKTRVLESTDRLGNDLAGVMALQRRLQGLERDLAAI 1003 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccCcchHHHHHHHHHHhhhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999888876654 799999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhccc
Q psy18058 902 ASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQST 981 (2301)
Q Consensus 902 ~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~ 981 (2301)
+.+|..+...+..+....|..+..|..++.+|..-|..|...+..+...++.+...+.|.++++++..||..+...+.+.
T Consensus 1004 e~kv~~L~~ea~~v~~~~Paea~~i~~r~~el~~~w~~l~~~~~~~~~~l~ea~~lQ~Fl~dld~f~~Wl~~tq~~~~se 1083 (2473)
T KOG0517|consen 1004 EAKVAALEKEANKVEEEHPAEAQAINARIAELQALWEQLQQRLQEREERLEEAGGLQRFLRDLDDFQAWLESTQTQVASE 1083 (2473)
T ss_pred HHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh--cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 982 DSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEK--EHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLE 1059 (2301)
Q Consensus 982 ~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~--~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~ 1059 (2301)
+ .+.|+++.+.++++|.++..+|...+..+..+...|+.+.. ..| ....+..++..|...|..|..++..|...|.
T Consensus 1084 e-~p~~l~eAe~LL~qH~~l~eEI~~~~e~y~~~~~~ge~~~~g~~~p-~~~~l~erL~~L~~gw~eL~~mWe~Rq~~L~ 1161 (2473)
T KOG0517|consen 1084 E-GPVDLAEAEQLLKQHAALREEIDGYQEDYQRMRALGETVADGQTDP-QYLFLRERLQALGTGWEELHRMWENRQKWLS 1161 (2473)
T ss_pred c-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCc-hHhHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4 79999999999999999999999999999999999998876 334 4456999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChh
Q psy18058 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQ 1139 (2301)
Q Consensus 1060 ~a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~ 1139 (2301)
+++.+|.|..+.+.+..-+...+..|+...+|.++++++.+|++|.+|...|+...+.+..+...|.+|+. .++ ++
T Consensus 1162 Q~l~lQ~F~Rda~q~ea~l~~qE~~L~~d~lp~sle~ae~~LKrh~DF~~tm~a~~~ki~a~~~~gd~Lv~--~~h--~~ 1237 (2473)
T KOG0517|consen 1162 QGLDLQLFLRDARQAEATLSNQEAFLSHDNLPDSLEEAEALLKRHRDFLTTMDANDEKIEALVDTGDKLVS--EGH--ID 1237 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh--cCC--cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997 444 56
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-------------------------------
Q psy18058 1140 YMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLL------------------------------- 1188 (2301)
Q Consensus 1140 ~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~~wL------------------------------- 1188 (2301)
+..|+++...+..+|..+.....+|..+|...+++|.|.+||.++..||
T Consensus 1238 s~~I~ek~~~I~~r~~~nr~rA~q~~~~L~~slelQ~flqd~~EL~~Wi~EK~l~a~Desy~~~~nl~~k~~kHqAFeaE 1317 (2473)
T KOG0517|consen 1238 SDKIREKAQSILARRKANRERAQQRLRKLKDSLELQEFLQDCDELKLWIEEKMLMAQDESYRDARNLHSKWLKHQAFEAE 1317 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------HHHhhh
Q psy18058 1189 --------------------------------------------------------------------------SQQEHV 1194 (2301)
Q Consensus 1189 --------------------------------------------------------------------------~~~E~~ 1194 (2301)
...|..
T Consensus 1318 Laank~~l~~i~~eG~~L~~ekpe~~~~V~~kl~~L~~~W~~Le~~t~~Kg~~L~qA~~q~~~~qs~~D~~~~l~~le~q 1397 (2473)
T KOG0517|consen 1318 LAANKEWLEKIEKEGQELVSEKPELKALVEKKLRELHKQWDELEKTTQEKGRKLFQANRQELLLQSLADAKKKLDELESQ 1397 (2473)
T ss_pred HHhChHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 333444
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1195 LSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETL 1274 (2301)
Q Consensus 1195 L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~~l~~~~~~r~~~L 1274 (2301)
|.+.+.|.++.+|..+++||+.++.+|.....+|..|...+..|...+| +++.|......+..|+..++..+..|+..|
T Consensus 1398 L~S~D~G~DL~Svn~llkKqq~lEsem~~~~~kv~el~s~~~~ma~~~~-~a~~I~~~~~~v~~Rf~~L~~Pl~~R~~~L 1476 (2473)
T KOG0517|consen 1398 LQSDDTGKDLTSVNDLLKKQQVLESEMEVRAQKVAELQSQAKAMAEEGH-SAENIEETTLAVLERFEDLLGPLQERRKQL 1476 (2473)
T ss_pred hcCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccCc-chhhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999888 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhh-hHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCCchhh
Q psy18058 1275 KDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRS-AKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAEL 1353 (2301)
Q Consensus 1275 ~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d-~~~l~~~l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~~~ 1353 (2301)
+.+..+++|..+++....||.|+++.+....|+. ...++...+||+.+++||..|.|+|+.|...|+.|+..+|+.++.
T Consensus 1477 e~S~e~hQf~~dvddE~~WV~ErlP~A~s~d~G~~L~~~q~l~KK~q~Lq~EI~~H~prI~~vl~~gq~Li~~~h~~a~~ 1556 (2473)
T KOG0517|consen 1477 EASKELHQFVRDVDDELLWVAERLPLASSTDYGENLQTVQSLHKKNQTLQAEIKGHQPRINDVLERGQSLIDSGHPEAEA 1556 (2473)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhCccCCchhhccChHHHHHHHHHhHHHHHHHHhcchHHHHHHHHhHHHHhcCCccHHH
Confidence 9999999999999999999999999999888765 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHH
Q psy18058 1354 IGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMA 1433 (2301)
Q Consensus 1354 I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le~ei~ 1433 (2301)
|..++.+|...|.+|...|..|.++|.++.+.++|.-++.+++.||.+-+..+.++++|+|-.++..+|+||+.|+.+|.
T Consensus 1557 i~~~~~eLe~aW~eL~~a~e~R~~~L~~a~kaQQY~fDaaE~EaWm~Eqel~m~see~gkDE~sa~~llkKH~~Le~~v~ 1636 (2473)
T KOG0517|consen 1557 IEEKLQELESAWQELKEACELRRQRLDEAVKAQQYYFDAAEAEAWMGEQELYMMSEEYGKDEDSALKLLKKHQALEQEVE 1636 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhHHHHhhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhccccc
Q psy18058 1434 VKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAK 1513 (2301)
Q Consensus 1434 ~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~~~~Wl~e~~~~a~ 1513 (2301)
.+...|..|-..|..|...++|+.+.|..+...|..-|..|++...+|+.+|+.++.+|+|.++++|+..||.+++..|.
T Consensus 1637 ~Y~~~i~qL~~~~~~lv~~~hP~~eri~~rQ~qldkly~~Lk~LA~eRr~~Lee~l~L~el~RE~dDLeqWIae~e~vAg 1716 (2473)
T KOG0517|consen 1637 DYAQTIEQLAQKAQALVEANHPESERISRRQSQLDKLYAGLKDLAEERRRRLEETLRLYELSREVDDLEQWIAEKEVVAG 1716 (2473)
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHHHHHHh-cChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1514 STEYGNSLFNVHMLKKKNQSLAKEID-NHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLI 1592 (2301)
Q Consensus 1514 s~~~g~~l~~vq~l~~k~q~l~~Ei~-~~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~L~ 1592 (2301)
|.++|+|.+.|..|+.||..|..++. ....+|+.++..++.||..||++++.|.++-+.|++.|.+|.+.+..|.+.|.
T Consensus 1717 S~elGqD~EHv~~Lq~KF~eFa~~te~iG~eRv~~~n~la~~LI~~ghs~a~tvaewkd~LneaW~~LlELi~tR~q~La 1796 (2473)
T KOG0517|consen 1717 SEELGQDFEHVTLLQEKFREFARDTEAIGSERVAACNLLADELIERGHSAAATVAEWKDGLNEAWADLLELIDTRGQKLA 1796 (2473)
T ss_pred ChhhcCChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CChHH
Q psy18058 1593 QSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMH-PESDQ 1671 (2301)
Q Consensus 1593 ~a~~~qqf~~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~-~~~~~ 1671 (2301)
.+..++.|+.|+.|+..||.++.. -.+++.|+|..++..+.++|.+|+.+|....+.|.+|.+.|..|..... +.++.
T Consensus 1797 as~elhrf~~D~~E~l~riqeK~~-~lp~~lgRD~~s~~al~R~H~~fe~dl~~l~~Qvqql~e~a~rLq~~YaG~kA~a 1875 (2473)
T KOG0517|consen 1797 ASRELHRFHRDAREVLGRIQEKQA-ALPDDLGRDLNSAEALQRKHEAFEHDLVALEPQVQQLQEDAARLQKAYAGDKAEA 1875 (2473)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHh-hCchhhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHH
Confidence 999999999999999999999986 4678999999999999999999999999999999999999999988754 66889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHHHHHHHHHHHHh
Q psy18058 1672 IALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTE 1751 (2301)
Q Consensus 1672 i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~~k~~~f~~e~~ 1751 (2301)
|..+++.|...|+.|+..|+.|+.+|..+..++.|+..|.||..|+...-..+.+.+-++|+..|+.++..|+.+..||+
T Consensus 1876 I~~reqeV~qaW~~L~~~~~~Rr~~L~~t~Dl~rF~~~VRDllsWmd~v~~qiqa~e~prDvss~ellm~~Hq~lkaEie 1955 (2473)
T KOG0517|consen 1876 IQQREQEVLQAWAELQGACEARRDRLADTSDLFRFFSMVRDLLSWMDEVIRQIQAQERPRDVSSVELLMNNHQGLKAEIE 1955 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHHHHhhhC
Q psy18058 1752 AIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM 1831 (2301)
Q Consensus 1752 ~~~~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ek~~~l 1831 (2301)
. ..+.+..|+.+|+.|+..+|+.+..|++++..|..+-+.+.+.++.|...|....++|+|.+||.-+.+||...+..|
T Consensus 1956 A-Re~~f~~c~eLG~~lL~~~hyas~EI~ekl~~L~~~r~e~~~~W~~r~e~Lq~~lev~~F~RdA~~aeawl~aQep~L 2034 (2473)
T KOG0517|consen 1956 A-REDNFSACIELGKSLLLRKHYASEEIKEKLRALQDRREELYEKWERRWEWLQQILEVHQFARDAKVAEAWLIAQEPYL 2034 (2473)
T ss_pred h-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHh
Confidence 5 678999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred -ccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1832 -SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNES-AKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQK 1909 (2301)
Q Consensus 1832 -~~~~g~d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a-~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~ 1909 (2301)
+.++|.+++.|+.++++|++|++-+.+.+.++..+...+ -.+... +.+..-+..+-..+...++.|+-.
T Consensus 2035 ~S~elG~sVdeVE~lIkrHEaFeKs~~a~eERfsaLerltt~el~e~---------r~~~~~~l~~~~r~k~~~~~r~~~ 2105 (2473)
T KOG0517|consen 2035 RSSELGSSVDEVEKLIKRHEAFEKSAAAQEERFSALERLTTLELIEA---------RHRESTLLQRRMRVKELAESRGHA 2105 (2473)
T ss_pred hHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH---------HHHHHHHHHHhhhhhhHHhhhhhH
Confidence 678999999999999999999999999999988887776 333321 112223444467788899999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-CCh--hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCC
Q psy18058 1910 LGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKA-RDV--SGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHY 1986 (2301)
Q Consensus 1910 L~~a~~~~~f~~~~~dl~~Wl~~~~~~~~~~e~~-~d~--~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~ 1986 (2301)
|.+|..+-.|. .|+++..........+ ..| ...-..+..|+.+++|+.+..+.++.+-+.|. +...|+
T Consensus 2106 l~~a~~~asf~-------~~~~e~~~~~~~~~~~~~~v~~~~~~~~~~~~qa~~aevqa~~~~~~~i~~rg~--~~~~~~ 2176 (2473)
T KOG0517|consen 2106 LHDALLMASFT-------QWIEEKAKRQPPAPESSESVPLDEKAKTLQKHQAFEAEVQANAPVVQEIPRRGE--LAKSHD 2176 (2473)
T ss_pred HHHHHHhhhHH-------HHHhhhhcccCCCcccCCCCCcchhhHHHHhhcccccchhccchhhhhhhhhhh--HhhcCC
Confidence 99999888876 8998885433222111 222 34445688999999999999999999999999 788899
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcCCCCChHHHHHHHHhHHHHH
Q psy18058 1987 ASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFE 2066 (2301)
Q Consensus 1987 ~s~eI~~~l~~L~~~~~~l~~~w~~r~~~L~~~~~~~~f~~d~~~~e~Wl~~~e~~l~~~~~g~s~~~ve~li~~h~~fe 2066 (2301)
.|++|...++.|...|+.|......|-..|++.-....|..-.+.+++|+...|+.....++|.+.+..-.+.++-..|.
T Consensus 2177 ~s~~~~~r~~~~~~~w~~l~~a~a~~~~~lEe~~~~lef~q~~~~~~awi~~ke~~~~~~d~Gkd~ehc~~l~~~l~~~r 2256 (2473)
T KOG0517|consen 2177 RSEEIARRLQGLRKHWEDLRAAMALRGQELEEARDFLEFGQRVDEAEAWIEEKEVKVGDGDLGKDLEHCLQLPRRLRETR 2256 (2473)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhccccccccchhcchhHHHHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888775
Q ss_pred HHHHc
Q psy18058 2067 KSAIA 2071 (2301)
Q Consensus 2067 k~~~~ 2071 (2301)
-...+
T Consensus 2257 ~~~~v 2261 (2473)
T KOG0517|consen 2257 SDSPV 2261 (2473)
T ss_pred CCCCC
Confidence 44443
No 3
>KOG0040|consensus
Probab=100.00 E-value=1.1e-147 Score=1363.92 Aligned_cols=1356 Identities=35% Similarity=0.588 Sum_probs=1305.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccCCCCChHhHHHHHHHhHHHH
Q psy18058 711 GADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVT 790 (2301)
Q Consensus 711 ~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a~~~~qf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~l~ 790 (2301)
.++.|+++-+++..+|..++..+..|+.+|+++..++-|..+++++..||.++...++.+.| .||.+++..+++|++|+
T Consensus 11 taediqerrq~vl~~y~~fk~~~~~~~~kleds~~~q~fkrdadel~~wi~ekl~~~~~~~y-~dptnlq~k~qkhqa~e 89 (2399)
T KOG0040|consen 11 TAEDIQERRQEVLTRYQSFKERSAERRQKLEDSYRFQYFKRDADELEKWIMEKLQIASDESY-RDPTNLQGKIQKHQAFE 89 (2399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCHHHHHHHHHHHHHhhhhccc-CCchhHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999888889999999999999988776555 89999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhhh-cCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q psy18058 791 EELKNYASTIEALRNQASQL-GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKD 869 (2301)
Q Consensus 791 ~el~~~~~~i~~L~~~~~~L-~~~~~~~~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~Wl~e~e 869 (2301)
+|+.++...|..|...|... ..+|..+..|+.++..|...|+-|.....+++-.|..++.+.+|.++|+++..||.++|
T Consensus 90 aevqa~s~~i~~ld~t~~~~~~~~h~a~e~~~~~l~el~~lw~~l~~~~~ekg~kl~~al~~~q~~~~c~~i~~wi~dke 169 (2399)
T KOG0040|consen 90 AEVQAHSRAIVELDKTGNEMITMGHFASEEIKARLEELHHLWDLLLEKLLEKGIKLLQALKLVQYLRECEDILEWIGDKE 169 (2399)
T ss_pred HHHHHhhhHHHHHHhHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999965 55889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 870 RMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRD 949 (2301)
Q Consensus 870 ~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~ 949 (2301)
..+.+.+.|.|+++++.++++|++|+.+|.+++.+|..||+.|..|+..+||+.+.|..+++++|..|.+|.+++-.|+.
T Consensus 170 ~~~t~~e~g~d~e~~evl~~kf~~f~~~~~~~e~rv~evnq~a~~~~~e~h~e~~~i~~k~~evn~aw~rl~~la~~rq~ 249 (2399)
T KOG0040|consen 170 AIVTSEELGQDLEHVEVLQKKFEDFQKELAAHEYRVNEVNQYADKLVEEGHPELDLIQKKQDEVNAAWQRLKGLALQRQE 249 (2399)
T ss_pred heeeHHHhcccHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHcCCCchHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHhHHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q psy18058 950 ELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEE 1029 (2301)
Q Consensus 950 ~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~ 1029 (2301)
.|-++..++.|.++++++..||.+++..|.+ +++|.|+.++++++++|+++++++.+++.++..|...|.+|...||+.
T Consensus 250 ~l~~a~~~qrf~rd~~et~~wi~ek~~~l~s-ddygrdl~~~q~l~~~h~g~erdla~l~~kv~~l~~~a~~l~~~hp~~ 328 (2399)
T KOG0040|consen 250 KLFGAAEVQRFNRDVDETIAWIKEKEPVLSS-DDYGRDLASVQALQRKHEGLERDLAALEDKVKELCAEAEKLTLSHPDD 328 (2399)
T ss_pred hhccHHHHHHhcccHHHHHHHHhhccccccc-cccchhHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999987 569999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q psy18058 1030 AEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIRE 1109 (2301)
Q Consensus 1030 ~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ 1109 (2301)
++.|+.+-.++...|+.+...+..|...|+.++-++.|..++++|..|+..+...++..+++.++.+++.+|..|++++.
T Consensus 329 a~qi~~~~~~~~~~w~~~~~~a~~r~~~l~~s~~~hrf~ad~rdL~~w~~~~~aaInadel~~dvag~e~lL~~hqEhK~ 408 (2399)
T KOG0040|consen 329 APQIQEKKEDLVSSWEHIRTLATERKEKLQASYWLHRFLADFRDLSSWINEMKAAINADELAKDVAGAEALLDRHQEHKG 408 (2399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhHHHHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy18058 1110 EIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLS 1189 (2301)
Q Consensus 1110 ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~~wL~ 1189 (2301)
+|+++.+++..-...|+.+.. .++ +....|+.++..+...|..|...|+.|....++|++++.|++|..+...|++
T Consensus 409 eIds~~dSf~~~~~~gq~l~~--~~~--~as~ev~ekl~~le~e~~~ll~lwe~r~~~yeqcmd~~lfyrdteq~d~wms 484 (2399)
T KOG0040|consen 409 EIDAREDSFKSADESGQKLVE--AGH--YASDEVREKLEILDNEKSALLELWEERRIQYEQCMDLQLFYRDTEQVDTWMS 484 (2399)
T ss_pred hhHHHHHHHhhhccccHHHHH--ccc--cccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 999999999999999999986 333 5567899999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1190 QQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQ 1269 (2301)
Q Consensus 1190 ~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~~l~~~~~~ 1269 (2301)
.+|++|++.+.|.++++++.++++|++|++.+.++..++..+..++.+|+...||+++.+..+-+.+..|...+..++..
T Consensus 485 kqeafl~nedlg~sl~S~e~l~kkhedfEks~~aQEeki~~~d~~atkli~~~hy~~~dv~~rr~~ll~rr~~l~e~a~~ 564 (2399)
T KOG0040|consen 485 KQEAFLANEDLGDSLDSVEALLKKHEDFEKSLAAQEEKIIALDEFATKLIQGQHYAAEDVAARRDALLARRDALREKAAT 564 (2399)
T ss_pred HHHHHHHhhhhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCC
Q psy18058 1270 QMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPE 1349 (2301)
Q Consensus 1270 r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~ 1349 (2301)
|+..|..+..++.|+++|+++..||+++...+.+++|.||+++..++++|+.|+.|+.+++.+++.+.+.|..++..+|+
T Consensus 565 r~~~lk~s~~~q~~~rd~de~~~wi~Ek~~~a~dd~y~d~~nlk~kvqk~q~fe~el~An~~r~~~i~~~g~~~i~~~h~ 644 (2399)
T KOG0040|consen 565 RRRLLKESLLLQQFYRDSDELKSWINEKLKTATDESYKDPTNLKGKVQKHQNFEKELAANKSRLEDIQKTGQELIEGGHY 644 (2399)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHH
Q psy18058 1350 LAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIE 1429 (2301)
Q Consensus 1350 ~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le 1429 (2301)
++..|-.++.++...|..|.+.+..++.+|..++..++|.++++++.-||.+++.+|.|.++|+|+.++.++.++|-.|+
T Consensus 645 A~d~v~~r~~ev~~Lw~~l~~aT~~kg~kl~ea~qq~qf~~n~edve~wl~e~e~ql~sed~gkdl~~vqn~~kk~~lLe 724 (2399)
T KOG0040|consen 645 AADNVTTRLSEVASLWEELLEATKKKGTKLREANQQQQFNRNIEDIELWLSEVEGQVASEDYGKDLTSVQNLQKKHGLLE 724 (2399)
T ss_pred HHHHHhHhHHHHHHHHHHHHhhcccccHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhc
Q psy18058 1430 TQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKL 1509 (2301)
Q Consensus 1430 ~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~~~~Wl~e~~ 1509 (2301)
.++..+.++++.+..+|..|...+|+++..|..+...|..||..+.+|+.+|..+|-.++...+.+++.+++..||.|++
T Consensus 725 ~~v~a~~d~vd~~~~~a~~fee~~h~da~~i~~kqe~L~~r~eal~dp~a~rk~Kl~d~l~~~~l~rd~edE~awi~E~E 804 (2399)
T KOG0040|consen 725 SDVAAHQDRVDGITDLAAQFQEIGHFDAKNIRAKQENLVARYEALKEPLATRKQKLLDSLQLQQLFRDTEDEEAWIREKE 804 (2399)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHhhhhhhhhchHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1510 PSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRS 1589 (2301)
Q Consensus 1510 ~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~ 1589 (2301)
|.+.|+..|.++..|+.++++|+++..+|.+|.|++..|..+|..++..+|+.++.|..++..|++.|..|...+..|..
T Consensus 805 ~~a~st~~gkdlI~~qnl~~k~q~~~~~ia~he~ri~~i~~r~~~m~~~~~f~aedvk~~~~~L~~~~~slk~ka~~r~~ 884 (2399)
T KOG0040|consen 805 PIAASTNRGKDLIGVQNLLKKHQALLAEIANHEPRIQEVTSRGNKMVEEGHFAAEDVRSRLKSLNQNWESLKAKASQRRQ 884 (2399)
T ss_pred hhccchhcchhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----
Q psy18058 1590 KLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSE----- 1664 (2301)
Q Consensus 1590 ~L~~a~~~qqf~~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~----- 1664 (2301)
.|++++++++|+.++.++++||.++++...+.++|+|++++..++++|+++..+++.|...|..|...+......
T Consensus 885 dle~s~q~~qy~ad~~eae~w~~ekEpi~~stdygKdedsa~allkkhea~~~dl~af~~~i~~lr~qa~~cq~Q~tpv~ 964 (2399)
T KOG0040|consen 885 DLEDSLQAQQYLADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALLSDLEAFGDSIQALREQANACRQQEAPVE 964 (2399)
T ss_pred chhhHHHHHHHHHHHhhHHHHhhccCcccccccccchhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhccCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999876653100
Q ss_pred ----------------------------------C---------------C---------CC---------hHHHHHHHH
Q psy18058 1665 ----------------------------------M---------------H---------PE---------SDQIALKQS 1677 (2301)
Q Consensus 1665 ----------------------------------~---------------~---------~~---------~~~i~~~~~ 1677 (2301)
. . |. -..|..+++
T Consensus 965 ~~g~~~v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~~~~~~~~l~~~~~i~~rq~ 1044 (2399)
T KOG0040|consen 965 DVGKECVLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDPGSASQPNLRREESIAQRQE 1044 (2399)
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhccCCcchHHHHHHHHHHhhHH
Confidence 0 0 00 124778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHHHHHHHHHHHHhhhhchH
Q psy18058 1678 QVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTER 1757 (2301)
Q Consensus 1678 ~l~~~~~~L~~~~~~R~~~Le~~~~~~qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~~k~~~f~~e~~~~~~~r 1757 (2301)
++..+|..|.+.+.+|.++|++.+.-+.+.+++.++..||.+++ +...++ |++.|..+++||.+|..++ +..++|
T Consensus 1045 qi~~qyr~lld~~~er~~~l~k~~ke~~l~~ea~dl~~wi~ekE--~~~~~v--dle~V~~lqkKfddf~~dl-kane~r 1119 (2399)
T KOG0040|consen 1045 QIENQYRSLLDLAEERKRKLEERCKEFLLAREANDLAEWIQEKE--AENTEV--DLEQVEVLQKKFDDFQKDL-KANEVR 1119 (2399)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH--HHhccc--cHHHHHHHHHHHHHhhhhh-ccChHH
Confidence 99999999999999999999999999999999999999999999 334445 9999999999999999999 557899
Q ss_pred HHHHHHHHHHHHHcCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHHHHhhhCc-ccc
Q psy18058 1758 VAAVNGIADQLIAAGHSD-SATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMS-DEL 1835 (2301)
Q Consensus 1758 v~~v~~~~~~L~~~~~~~-~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ek~~~l~-~~~ 1835 (2301)
+..+|..|+.|...|.+. +..|+.. +|.+|..|..+..+|.+.|.+|+++.+|+++++++..||.++...++ .+.
T Consensus 1120 Lre~n~vAd~l~~~g~t~~~~~irqq---ln~rw~~Lqr~~~E~~q~lgsahevq~fhrd~detk~~i~ek~~al~~~d~ 1196 (2399)
T KOG0040|consen 1120 LRDINKVADDLTSEGQTEEAAQIRQQ---LNARWRSLQRLAEERRQLLGSAHEVQRFHRDADETKEWIEEKCQALNADDP 1196 (2399)
T ss_pred HHHHHHHHHhccccccCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHhhccccc
Confidence 999999999999888443 3355544 99999999999999999999999999999999999999999999985 579
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q psy18058 1836 GRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGD 1915 (2301)
Q Consensus 1836 g~d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~~ 1915 (2301)
|.|+.+|+.++++|++|++++.++...|..+.+.+.+|...+| ..++.++.+.-+++..|..|......|+.+|..+++
T Consensus 1197 g~dl~svQalqrkheg~erdla~L~Dkvt~l~e~a~rLtqshp-~~aeq~q~qk~elne~w~dl~s~~~~Rkekl~ds~d 1275 (2399)
T KOG0040|consen 1197 GSDLRSVQALQRKHEGFERDLAALGDKVTSLGETAERLSQSHP-DAAEDLQRKQMELNEAWEDLQGRAKDRKEKLLDSYD 1275 (2399)
T ss_pred cchHHHHHHHHHHhccchhchHHHhhHHHHHHHHHHHhhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999999999999999999999998 678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCchHHHHHH
Q psy18058 1916 LFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKL 1995 (2301)
Q Consensus 1916 ~~~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~s~eI~~~l 1995 (2301)
+++|++..+|++.|+..|...+.+.+++.|+.|++.++.+|++++++|++|..+|+++-+.|..|++++|++|++|+.++
T Consensus 1276 ~~rfLs~~rdl~~wi~sm~~lvss~ela~d~tg~eAllerhqe~rte~daRa~tfqA~eqf~~~ll~~~h~As~eie~kl 1355 (2399)
T KOG0040|consen 1276 LQRFLSDYRDLMNWINSIGGLVSSQELANDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGNELLDSGHYASPEIEKKL 1355 (2399)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhHHHhhhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcCCCCChHHHHHHHHhHHHHHHHHHchHHh
Q psy18058 1996 VGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEER 2075 (2301)
Q Consensus 1996 ~~L~~~~~~l~~~w~~r~~~L~~~~~~~~f~~d~~~~e~Wl~~~e~~l~~~~~g~s~~~ve~li~~h~~fek~~~~q~ek 2075 (2301)
+.+...+..+...|..|...|++|++++.|.+||.+++.|++.+|.+| ..+.+ +.+.|+.||++|++|-|++.+|++|
T Consensus 1356 ~~~~l~r~~le~awv~rr~~ldq~lelqLf~~dceq~e~~maare~~l-~dD~~-s~D~veAl~kk~edfdkAi~~qeqk 1433 (2399)
T KOG0040|consen 1356 QAVKLERDDLEKAWVKRRKILDQCLELQLFQRDCEQAESWMSAREAFL-ADDKS-SLDSVEALIKKHEDFDKAINAQEEK 1433 (2399)
T ss_pred HHHHhhccchHHHHHHHHHHHHhhhhHHHHHhhhHHHHHHHHHHHHhh-ccccc-ccchHHHHHHHHHHHHHhhhhhHHH
Confidence 999999999999999999999999999999999999999999999999 77888 9999999999999999999999999
Q ss_pred HHHHHhhh
Q psy18058 2076 FSALERLT 2083 (2301)
Q Consensus 2076 ~~~l~~~t 2083 (2301)
+.+|.-.+
T Consensus 1434 it~l~~~a 1441 (2399)
T KOG0040|consen 1434 IAALQHFA 1441 (2399)
T ss_pred HHHHHHHH
Confidence 99996544
No 4
>KOG0040|consensus
Probab=100.00 E-value=1e-125 Score=1169.19 Aligned_cols=1658 Identities=29% Similarity=0.488 Sum_probs=1499.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhhhhhccCCCchhhhhhHHHHHHHHHHHHHhcCCCCCCC
Q psy18058 302 IHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTP 381 (2301)
Q Consensus 302 ~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~~~~~~ek~~~~~e~g~le~~~~~~~~~~~~~~~~~~~p 381 (2301)
.+.|++.......|+......+++.+.+++++.+...++.++.|.+. +.-+......+..+.++++-+.. |..
T Consensus 469 ~~lfyrdteq~d~wmskqeafl~nedlg~sl~S~e~l~kkhedfEks-----~~aQEeki~~~d~~atkli~~~h--y~~ 541 (2399)
T KOG0040|consen 469 LQLFYRDTEQVDTWMSKQEAFLANEDLGDSLDSVEALLKKHEDFEKS-----LAAQEEKIIALDEFATKLIQGQH--YAA 541 (2399)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHhhccc--ccc
Confidence 45688899999999999999999999999999999999999999765 22223344566777888876543 444
Q ss_pred CccCChhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhccccCCChHH
Q psy18058 382 KEGKMISDINKAWERLEK-------AEHERELALREELIRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGA 454 (2301)
Q Consensus 382 ~~~~~~~~l~~~W~~Le~-------~~~~r~~~L~~el~r~e~le~l~~rf~~~a~~~e~Wl~e~~~~l~~~~~g~dl~~ 454 (2301)
.++..+|..|.. ....|...|...... +.|.+++..+..||+++......++| .|++.
T Consensus 542 ------~dv~~rr~~ll~rr~~l~e~a~~r~~~lk~s~~~--------q~~~rd~de~~~wi~Ek~~~a~dd~y-~d~~n 606 (2399)
T KOG0040|consen 542 ------EDVAARRDALLARRDALREKAATRRRLLKESLLL--------QQFYRDSDELKSWINEKLKTATDESY-KDPTN 606 (2399)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH--------HHHHhhHHHHHHHHHHHhcccccccc-cCCCC
Confidence 344445554422 122333444444433 44999999999999999876555555 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 455 VEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQE 534 (2301)
Q Consensus 455 v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~~~~~~~~~i~~r~~~l~~~W~~L~~~~~~R~~~Le~~l~l~~~~~e 534 (2301)
+..-+++|+.|+.++.+...+++.+...|+++...+++..+.|..|+..|...|..|.+.+..+...|..+...++|++.
T Consensus 607 lk~kvqk~q~fe~el~An~~r~~~i~~~g~~~i~~~h~A~d~v~~r~~ev~~Lw~~l~~aT~~kg~kl~ea~qq~qf~~n 686 (2399)
T KOG0040|consen 607 LKGKVQKHQNFEKELAANKSRLEDIQKTGQELIEGGHYAADNVTTRLSEVASLWEELLEATKKKGTKLREANQQQQFNRN 686 (2399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHhHhHHHHHHHHHHHHhhcccccHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCChhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHHHHHHHH
Q psy18058 535 MLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQ 614 (2301)
Q Consensus 535 ~~~l~~Wl~e~~~~l~s~~~g~dl~~v~~ll~kh~~l~~di~~~~~~v~~l~~~a~~l~~~~~~~~~~~~~~~~i~~~l~ 614 (2301)
.+++.-|+.+.+..|.+.++|+++..|.++..+|-.|++++.++..+|..+..++..|.. ..+.+...|..+..
T Consensus 687 ~edve~wl~e~e~ql~sed~gkdl~~vqn~~kk~~lLe~~v~a~~d~vd~~~~~a~~fee------~~h~da~~i~~kqe 760 (2399)
T KOG0040|consen 687 IEDIELWLSEVEGQVASEDYGKDLTSVQNLQKKHGLLESDVAAHQDRVDGITDLAAQFQE------IGHFDAKNIRAKQE 760 (2399)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH------HcCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999973 23467888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHH
Q psy18058 615 QLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQL 694 (2301)
Q Consensus 615 ~L~~~~~~L~~~~~~R~~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l 694 (2301)
.|..+|+.|.+....|..+|-+++.+.+.+++......||.|+|+...+...|+|+-.++.++++|+++..+|..|.+.+
T Consensus 761 ~L~~r~eal~dp~a~rk~Kl~d~l~~~~l~rd~edE~awi~E~E~~a~st~~gkdlI~~qnl~~k~q~~~~~ia~he~ri 840 (2399)
T KOG0040|consen 761 NLVARYEALKEPLATRKQKLLDSLQLQQLFRDTEDEEAWIREKEPIAASTNRGKDLIGVQNLLKKHQALLAEIANHEPRI 840 (2399)
T ss_pred HHHHHHhhhhchhHHHHHHHHHHhhhhhhhhchHHHHHHHhhcchhccchhcchhHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccCCCC
Q psy18058 695 MSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGR 774 (2301)
Q Consensus 695 ~~l~~~g~~L~~~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a~~~~qf~~~~~el~~Wl~e~~~~l~~~~~g~ 774 (2301)
..+...|..++..+|+.++.|..++..|+..|..++..+..|+..|+..+..+||+.++.+.++||.++++++.+.++|.
T Consensus 841 ~~i~~r~~~m~~~~~f~aedvk~~~~~L~~~~~slk~ka~~r~~dle~s~q~~qy~ad~~eae~w~~ekEpi~~stdygK 920 (2399)
T KOG0040|consen 841 QEVTSRGNKMVEEGHFAAEDVRSRLKSLNQNWESLKAKASQRRQDLEDSLQAQQYLADANEAESWMREKEPIVGSTDYGK 920 (2399)
T ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHhhHHHHhhccCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcCC-----------------------------------------
Q psy18058 775 DEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQ----------------------------------------- 813 (2301)
Q Consensus 775 d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~----------------------------------------- 813 (2301)
|+++...++++|+++..++.++...|..|+.++..-..+
T Consensus 921 dedsa~allkkhea~~~dl~af~~~i~~lr~qa~~cq~Q~tpv~~~g~~~v~alyd~q~kSprev~mKkgDvltll~s~n 1000 (2399)
T KOG0040|consen 921 DEDSAEALLKKHEALLSDLEAFGDSIQALREQANACRQQEAPVEDVGKECVLALYDYQEKSPREVTMKKGDVLTLLNSIN 1000 (2399)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcc
Confidence 999999999999999999999999999999988742100
Q ss_pred -----------------------CCCC---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q psy18058 814 -----------------------DKES---------PEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGV 861 (2301)
Q Consensus 814 -----------------------~~~~---------~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l 861 (2301)
.+.. ..|..+...+..+|..+.....+|...|+....-+-..+++.++
T Consensus 1001 kdwwkve~~d~qg~vpa~yvk~~~~~~~~~~~l~~~~~i~~rq~qi~~qyr~lld~~~er~~~l~k~~ke~~l~~ea~dl 1080 (2399)
T KOG0040|consen 1001 KDWWKVEVNDRQGFVPAAYVKRLDPGSASQPNLRREESIAQRQEQIENQYRSLLDLAEERKRKLEERCKEFLLAREANDL 1080 (2399)
T ss_pred cccccchhhhhcCcchHHHHHHhccCCcchHHHHHHHHHHhhHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 0011 13567788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHH
Q psy18058 862 QQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLR 941 (2301)
Q Consensus 862 ~~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~ 941 (2301)
..||.++|..... -+++.|..++.+|.+|..++....+++..+|.+|..|...+ .+.....-...+|.+|..|.
T Consensus 1081 ~~wi~ekE~~~~~----vdle~V~~lqkKfddf~~dlkane~rLre~n~vAd~l~~~g--~t~~~~~irqqln~rw~~Lq 1154 (2399)
T KOG0040|consen 1081 AEWIQEKEAENTE----VDLEQVEVLQKKFDDFQKDLKANEVRLRDINKVADDLTSEG--QTEEAAQIRQQLNARWRSLQ 1154 (2399)
T ss_pred HHHHHHHHHHhcc----ccHHHHHHHHHHHHHhhhhhccChHHHHHHHHHHHhccccc--cCHHHHHHHHHHHHHHHHHH
Confidence 9999999944332 28999999999999999999999999999999999998877 22222222233999999999
Q ss_pred HHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q psy18058 942 EKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVA 1021 (2301)
Q Consensus 942 ~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~ 1021 (2301)
.+..++...|.+++.++.|+++.+++..||.++...|... +.|.|+.++++++++|+++++++.++..++..|...+..
T Consensus 1155 r~~~E~~q~lgsahevq~fhrd~detk~~i~ek~~al~~~-d~g~dl~svQalqrkheg~erdla~L~Dkvt~l~e~a~r 1233 (2399)
T KOG0040|consen 1155 RLAEERRQLLGSAHEVQRFHRDADETKEWIEEKCQALNAD-DPGSDLRSVQALQRKHEGFERDLAALGDKVTSLGETAER 1233 (2399)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHhhccc-cccchHHHHHHHHHHhccchhchHHHhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999774 589999999999999999999999999999999999999
Q ss_pred HhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHH
Q psy18058 1022 IEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLL 1101 (2301)
Q Consensus 1022 L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll 1101 (2301)
|...+|+.+..++.+..+++..|..|......|..+|..++++++|+.+.+++..|+..+...+.+.+.+.|+.+++.++
T Consensus 1234 Ltqshp~~aeq~q~qk~elne~w~dl~s~~~~Rkekl~ds~d~~rfLs~~rdl~~wi~sm~~lvss~ela~d~tg~eAll 1313 (2399)
T KOG0040|consen 1234 LSQSHPDAAEDLQRKQMELNEAWEDLQGRAKDRKEKLLDSYDLQRFLSDYRDLMNWINSIGGLVSSQELANDVTGAEALL 1313 (2399)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcchhhhHHHhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy18058 1102 NQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDA 1181 (2301)
Q Consensus 1102 ~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~ 1181 (2301)
+.|++...+|+.+...|..+...|+.+++. ++ ..++.+..++..++.....+...|..|...|++|+++|.|.+++
T Consensus 1314 erhqe~rte~daRa~tfqA~eqf~~~ll~~--~h--~As~eie~kl~~~~l~r~~le~awv~rr~~ldq~lelqLf~~dc 1389 (2399)
T KOG0040|consen 1314 ERHQEHRTEIDARAGTFQAFEQFGNELLDS--GH--YASPEIEKKLQAVKLERDDLEKAWVKRRKILDQCLELQLFQRDC 1389 (2399)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--cC--cCCHHHHHHHHHHHhhccchHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 999999999999999999999999999973 32 34556999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHH
Q psy18058 1182 KQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRN 1261 (2301)
Q Consensus 1182 ~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~ 1261 (2301)
.+.+.|+...|.+| .++.+ +.+.+++++++|++|-..+..+..++..+..++.+|+..+||+.+.|..+...+..||.
T Consensus 1390 eq~e~~maare~~l-~dD~~-s~D~veAl~kk~edfdkAi~~qeqkit~l~~~a~~lia~~hya~e~i~~~R~~vlDrwr 1467 (2399)
T KOG0040|consen 1390 EQAESWMSAREAFL-ADDKS-SLDSVEALIKKHEDFDKAINAQEEKIAALQHFAESLIADNHYAKEEIATRRQQVLDRWR 1467 (2399)
T ss_pred HHHHHHHHHHHHhh-ccccc-ccchHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999 66667 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q psy18058 1262 ANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGS 1341 (2301)
Q Consensus 1262 ~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~~~~l~~l~~~g~ 1341 (2301)
.|...+-+.+.+|.....+++|.+++.++..||.|+.+++.+++|.||.+++.+-++|++|+++|.++.+++..++..|.
T Consensus 1468 ~lk~~Li~krtklg~~qTlqqf~rd~deiE~wi~Ek~~~a~eesykD~tniq~k~qk~qaf~~el~~~sd~i~~vi~~gN 1547 (2399)
T KOG0040|consen 1468 ALKAQLIEKRSKLGDSQTLQQFSRDADEIENWISEKLQTACDESYKDPTNIQSKHQKHQAFEAELHANSDRIHGVINMGN 1547 (2399)
T ss_pred HHHHHHHHHhccchHHHHHHHHHhhHHHHHHHHHHHHHHhhhhcccCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHH
Q psy18058 1342 ELMKEK-PELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNI 1420 (2301)
Q Consensus 1342 ~L~~~~-~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ 1420 (2301)
.|+... ......++.+++.+...|.-|...+..+..+|..++....|...+.++.-|+.+++..|.+.++|+||.++.+
T Consensus 1548 ~lie~~c~g~e~a~~~~l~~l~d~w~~l~~~t~ek~~klKea~kq~~f~t~Ikd~~fwl~eve~ll~~ed~~kdLasv~n 1627 (2399)
T KOG0040|consen 1548 SLIERSCDGNEDAVKARLEQLADQWDHLVEKTTEKSKKLKEANKQQRFNTAIKDLEFWLSEVETLLASEDYGKDLASVGN 1627 (2399)
T ss_pred ccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 998753 3456779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy18058 1421 LMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIED 1500 (2301)
Q Consensus 1421 ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~ 1500 (2301)
+|++|+-++.++-++.+.+..++.++..++..+.++...|.++...++.||.++...+..|+..|..+..++||++|..|
T Consensus 1628 lLkkhqlle~di~a~ed~~kd~n~qadSll~s~~f~~~~i~dkr~~i~~r~~~V~~laa~~r~kl~ea~~L~qff~d~~D 1707 (2399)
T KOG0040|consen 1628 LLKKHQLLEADIVAHEDRLKDLNTQADSLLESGQFDTDQIVEKRDNINKRFLNVKELAAARRAKLNEALALHQFFRDIDD 1707 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccCcccCCCHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHHH
Q psy18058 1501 EKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQL 1580 (2301)
Q Consensus 1501 ~~~Wl~e~~~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~L 1580 (2301)
+..||.++.....|.+||.++.+|+.+.+||..+..|+..|+|.|..|...|+.|..........|+.++..+...|..|
T Consensus 1708 eeswikek~l~V~sedygrdl~gVqnl~kkhkrle~el~~hepaiQ~v~~~~ekl~d~a~vg~~ei~~rl~~~~~~w~~l 1787 (2399)
T KOG0040|consen 1708 EESWIKEKKLLVSSDDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQNVLDMGEKLKDKAAVGVEEIQQRLAQFVEHWEEL 1787 (2399)
T ss_pred HHHHHHHHHHhccchhhcccchhhHHHHHHhchhhhhhhhccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999666667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1581 KKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQ 1660 (2301)
Q Consensus 1581 ~~~~~~R~~~L~~a~~~qqf~~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~ 1660 (2301)
+..+..|..+|..++..|+|...+++.++|+.++...+.++++|.....++.++++|.+|+.+...++..|..+...|..
T Consensus 1788 k~la~~r~~~l~es~~~Q~f~~~~eeeEaWinek~~l~~~~d~gd~laaiq~Ll~kh~a~e~d~~~hK~rV~~~~~~g~d 1867 (2399)
T KOG0040|consen 1788 KELAAARGQKLEESLEYQQFLANVEEEEAWINEKQQLLVSEDYGDTLAAVQGLLKKHEAFETDFTVHKDRVQDVCAQGED 1867 (2399)
T ss_pred HHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHH
Q psy18058 1661 LTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLW 1740 (2301)
Q Consensus 1661 L~~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~ 1740 (2301)
++...+...+.|..+...+...--.+..++..|..+|.....+.+|.-.++-++.||..++....+.++|.|+.+++.+.
T Consensus 1868 ll~~~~h~~~~I~sk~~~l~~k~~~l~~~~~~~k~kl~dn~a~~qf~wk~dVveswi~~ke~~~k~e~~G~dl~~~q~ll 1947 (2399)
T KOG0040|consen 1868 LINKVNHHEEQISSKCEQLNEKLPSLEKAAAARKAQLEDNSAFLQFNWKADVVESWIADKENSLKTDDFGRDLSSVQTLL 1947 (2399)
T ss_pred HHHHhhhhhhHHHHHHHHHhhcchhHHHHHHhHHHhhhhhHHHHHhhhhhhhhHHhhhhHHHHHHhhhhhhhHHhhhhHh
Confidence 99886656667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH------Hh
Q psy18058 1741 ERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRE-LH------KF 1813 (2301)
Q Consensus 1741 ~k~~~f~~e~~~~~~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~------~f 1813 (2301)
.+-+.|-.-+.+..++.+..+..+-+.|++.-|..++.|..+--.+..+|+.+......|++.|-.+.. ++ -+
T Consensus 1948 ~kQ~T~dasl~aF~QE~~~~itelkdql~~a~hnQSdAi~kr~l~l~~rw~~l~~~s~~~~kkLLe~Q~~fkk~ee~~l~ 2027 (2399)
T KOG0040|consen 1948 TKQETFDAGLQAFQQEGIPNITALKDQLISAQHNQSKAIEKRHAALIKRWQQLLAASAARRQKLLEMQSQFRKIEDLFLT 2027 (2399)
T ss_pred hHHHHHHhhhhhhHHHhHhhHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888899999999999999999999999999999999999999999888887766653 33 34
Q ss_pred hhcHHHHHHhHHHHh-hhCccccC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHH
Q psy18058 1814 FHDCKDILGRISEKH-HAMSDELG-RDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAE 1891 (2301)
Q Consensus 1814 ~~d~~e~l~wi~ek~-~~l~~~~g-~d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~ 1891 (2301)
+....+...|+.+.. ..++..++ ...++...+...|..|..-+...+.....+.+...++.....++..-.. --+..
T Consensus 2028 faKkaSafNwwfenaEE~l~~~~~~ns~~Ei~~l~~~h~~f~~sls~a~~df~~l~~ld~~iks~~v~~~pytw-~t~e~ 2106 (2399)
T KOG0040|consen 2028 FAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEDFQASLSSAQADFKQLAELDQQIKSFNVGSNPYTW-FTMEA 2106 (2399)
T ss_pred HHHHHHhhhHHHHhhHhcccccccccchHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCCCCCCcee-ehHHH
Confidence 556677777777764 45665554 3457888999999999999999999999999999998766554443322 24577
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHHHHHH
Q psy18058 1892 VVNAWASLQNACDARKQKLGDTGD--------LFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEI 1963 (2301)
Q Consensus 1892 v~~~W~~L~~~~~~R~~~L~~a~~--------~~~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~~~~~ei 1963 (2301)
|.+.|..|...+.+|..-|..-.. +..|-..+.-+..||.++...+.-.+.+ ..|.+++-......||
T Consensus 2107 Le~tw~~L~~iI~eR~~el~~E~~Rq~~N~klc~efa~~a~tfh~wi~etr~el~~~~sg----tLE~Qleal~~k~~ev 2182 (2399)
T KOG0040|consen 2107 LEETWRNLQQIISERERELDKEISRQEENDKLCEEFACTANTFHQWIVETRKELEDGESG----TLEDQLEALKRKIKEV 2182 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----cHHHHHHHHHHHHHHH
Confidence 899999999999999998875542 4578888889999999999877654333 3555667777778889
Q ss_pred HhhhhhHHHHHHHHH----HHHhcCCCCc---hHHHHHHHHHHHHHHHH
Q psy18058 1964 DTREDNFTACISLGK----ELLSRNHYAS---NEIKEKLVGLSNQRNAL 2005 (2301)
Q Consensus 1964 ~~~~~~~~~~~~~g~----~L~~~~~~~s---~eI~~~l~~L~~~~~~l 2005 (2301)
.++...+..+.+.|- .||-...|.+ --|...+.+|.+....+
T Consensus 2183 qa~rg~l~~ie~~g~lmE~~lIldnkyt~~st~GlaqqwdQl~qL~~rM 2231 (2399)
T KOG0040|consen 2183 QAMRGQLQKIEKLGALMESRLILDNKYTEHSTVGLAQQWDQLDQLMMRM 2231 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhcccccccCchHHHHHHHHHHHHHHHH
Confidence 999999999999994 3555555522 23444444444443333
No 5
>KOG0035|consensus
Probab=100.00 E-value=3.2e-64 Score=630.27 Aligned_cols=691 Identities=34% Similarity=0.540 Sum_probs=569.7
Q ss_pred CCCCCCCCcccCCCCCCchhhhHhhhhhhhHHHHHHHHHHHHHHHHcccc-CCCCccchhhHhhhcHHHHHHHHHHhcCC
Q psy18058 18 GQQEPIEDYEYDGGNSSSRLFERSRIKALADERESVQKKTFQKWVNSHLV-RVSCRIGDLYVDLRDGKMLLKLLEVLSGE 96 (2301)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~f~~W~n~~l~-~~~~~i~dl~~dl~dG~~L~~lle~l~~~ 96 (2301)
++.|+..+++|+...-++. .|+++|.+|||.|+|+||. +.+..|.++.+||+||+.|+.|+++++|+
T Consensus 4 ~~~~l~~e~~~a~~~~~~~------------~~e~~q~kTft~W~~s~L~ir~~s~ie~~e~D~~n~lk~~~l~ev~~~e 71 (890)
T KOG0035|consen 4 GLGRLQREEEWAAKFLLTP------------AWEKVQLKTFTKWCNSKLRIRAGSSIEEIEEDFSNGLKLLILLEVISGE 71 (890)
T ss_pred hhhccchhhHHHHHhhcCc------------cHHHHhccccccccchhhhhcccCccchhhhhhhhhhhhhhhcccccCC
Confidence 4566777888888777766 8999999999999999998 88899999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHhhHHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccccccccccHHHH
Q psy18058 97 RLPRPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDA 176 (2301)
Q Consensus 97 ~~~~~~~~~~~~~~~~N~~~al~~~~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~~~~~~~~~~~~ 176 (2301)
.+|+|..++||+|+++|++.+|.|....|+++++|||++|||||.++++|+||+||++|-|++|++.. ..++++.
T Consensus 72 ~l~~~~~~~~r~hk~En~~~~l~~~~sk~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~~-----e~~a~eg 146 (890)
T KOG0035|consen 72 NLPPPTRGKMRVHKLENVNKALVFIESKGVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVEC-----ELSAKEG 146 (890)
T ss_pred ccCCCCCCccchhhhccccceEEEeccccccccccchhhhcCcchhhhhHHHHHhhccccccchhhhc-----chhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999997652 4789999
Q ss_pred HHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCcc-ccccCccCHHHHHHHHHHHHHHhcCCcccccccccc
Q psy18058 177 LLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQ-FEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIF 255 (2301)
Q Consensus 177 ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~-~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~ 255 (2301)
||.||+.+|+.|.+|+|.||++||+||.+|||+||+|||++|| |+++++.++..|++.||++|+..+|||++|+|+|++
T Consensus 147 llLwcq~~Ta~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~iAek~l~i~r~ld~ed~~ 226 (890)
T KOG0035|consen 147 LLLWCQRKTAPYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFDIAEKFLGIPRLLDAEDIV 226 (890)
T ss_pred hhhheecccCCccccccccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhhhhhhcCCcccccCccccc
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999976
Q ss_pred -ccCCChhhHHHHHHHHHHHhhhcchhhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q psy18058 256 -VEQPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVG 334 (2301)
Q Consensus 256 -~~~~de~si~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~ 334 (2301)
.+.||++.|||||+.|||.|+......+...||+++...-.+.+..+.+|++++++++.||..++|++.++...+....
T Consensus 227 ~~~~pde~aimtyv~~~~~~fSg~~~~~t~~n~i~s~~av~qe~~~~~e~~e~~~s~~l~~~~~~~P~l~~r~~~~~~~~ 306 (890)
T KOG0035|consen 227 EAAIPDEKAIMTYVSSYYHAFSGAEAAETAANRICSVLAVNQEKETTMEEYETLASELLEWIARRTPWLQNRVTDSVGAK 306 (890)
T ss_pred cCCCCchhhhhhhhhhccccccCcchhhhhcccccchhhccccccchHHHHHHHhhhhhhHHHhcCcccccccccchhhh
Confidence 5699999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh--hhhccCCCchhhhhhHHHHHHHHHHHHHhcCCCCCCCCccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 335 VQQQLLQFNN--YRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREEL 412 (2301)
Q Consensus 335 ~~~~l~~f~~--~~~~ek~~~~~e~g~le~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~W~~Le~~~~~r~~~L~~el 412 (2301)
++..+..|.+ |+..++||.+..++.++..+.+++++.+..+++++.|..|..+++++..|..||.+..--+.+|..++
T Consensus 307 ~q~~l~~~rd~~~r~~~~e~~v~~~~~~~~~~st~q~k~~~~~~p~~~~s~~~~~S~~~~~~~~le~~~~~~e~~ll~~~ 386 (890)
T KOG0035|consen 307 AQRKLEFSRDAVYRRLEKEPLVEDKGRLESGFSTLQTKLRLESRPAKLASSGVLVSDINDAWQGLEQAEKLYEESLLAEI 386 (890)
T ss_pred hccccccccccccccccccccccccccccccchhhhhhhhhhcccccCcccccccccccccccchhhhcccccccchhhh
Confidence 9999998988 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy18058 413 IRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFD-LGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKY 491 (2301)
Q Consensus 413 ~r~e~le~l~~rf~~~a~~~e~Wl~e~~~~l~~~~~g~d-l~~v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~~~~ 491 (2301)
.+.++++.++..|..+++.-+.|.-..+..+..-++|.+ +..+.+..++|++++.++.+++.++..++.+++.+....|
T Consensus 387 ~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~ea~~~~~~~~~~~~e~~~ai~~~~~~~~~ 466 (890)
T KOG0035|consen 387 RRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHEAFESDLSAHQDNVEAFCAIAHELNELLY 466 (890)
T ss_pred HHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhcccccccccchhhhhcchhHHHHHHHHhhhhhh
Confidence 999999999999999999999999999888888777754 6899999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHhhccccccCChhhHHH
Q psy18058 492 HDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSF--------QEMLYILDSMEELKMRLLSDDYGKHLMGVED 563 (2301)
Q Consensus 492 ~~~~~i~~r~~~l~~~W~~L~~~~~~R~~~Le~~l~l~~~~--------~e~~~l~~Wl~e~~~~l~s~~~g~dl~~v~~ 563 (2301)
+....++.+...+..+|.++-++...|+.+|.......+.. ...--+.+||+-....+.+......+.+++.
T Consensus 467 ~~~~~~a~~~q~i~dq~~~~~~ls~~r~pal~~~~~~~dk~~~~~le~a~Raa~~~~~l~~~~~d~~d~~~~~~ire~~~ 546 (890)
T KOG0035|consen 467 DDAKLVAADCQHICDQWDDLGQLSRKRRPALMQMEKVLDKLAVLTLEFAKRAAPFNNWLKGVQEDLQDNEISYSIREIQR 546 (890)
T ss_pred hhhhhhhhhhhhccccccccchhhhhhchhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhccchHhhhc
Confidence 99999999999999999999999988998888877543333 3334478999997777777666677888888
Q ss_pred HHHHHHhHHHHH---HHHHHHHHHHHHHHhhhhhhcc------cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 564 LLQKHSLVEADI---NVLGERVKSVVQQSQRFLDEET------NEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARL 634 (2301)
Q Consensus 564 ll~kh~~l~~di---~~~~~~v~~l~~~a~~l~~~~~------~~~~~~~~~~~i~~~l~~L~~~~~~L~~~~~~R~~~L 634 (2301)
++..|..+...+ ..++..+-.....+.+.+...+ .+.|.+.+ +...|+.+......|..-+
T Consensus 547 ~~~a~~~~k~t~p~a~~~~~~~~~e~~e~~~~~~~~~~~~~~~~np~~~~s----------~~~~~d~v~~~~~~~~~~~ 616 (890)
T KOG0035|consen 547 LRAADLQFKSTLPEADGEGQKISDEEKEREKVSEQLNPKIEPDTNPYTTLS----------IYGKWDAVLSSVPDRDSIE 616 (890)
T ss_pred cchhhhhhcccCccccchhhhhhhhhhHHHHhhhhcCcccccccccccccc----------cccchhhhcccccccchhh
Confidence 888887776532 2222222222222222221000 11222222 4555666666665555533
Q ss_pred HhHHH-------H-HHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q psy18058 635 EESRK-------L-WQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVN 706 (2301)
Q Consensus 635 e~~~~-------l-~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~ 706 (2301)
..... + ..|-..+.-...|+...-.-.+...++ +....+..+...+....-+..+.+.+..+-...+.+..
T Consensus 617 ~~~~~~q~~~~s~~~~~~q~an~~~p~vp~~~~e~s~~~~~-~~gt~e~~~~rLr~~~~~~~~~k~~~~~~~~~~q~~~~ 695 (890)
T KOG0035|consen 617 ANVHARQQPNESLRRVFAQQANLDGPWVPAKMEESSRININ-DQGTLEDRLERLRETEERSMNYKSNGDLLAKQHQLMQE 695 (890)
T ss_pred HHHHHhhccCccccccccccccCCCcccCchhhcccccccc-cCCCHHHHHHHHHHHHHHhhccCcchhHHHHHHHHhhh
Confidence 33221 1 246677888889997776544332221 22333444444444444444455555544444444333
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 707 QQHFGADRIRGRLQDTMAMWQNLLDLAAFR 736 (2301)
Q Consensus 707 ~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R 736 (2301)
...++...-..-+..+...|+.+..-+..-
T Consensus 696 ~~~~~~~~~~~~~e~~~~g~e~~~~~~~~~ 725 (890)
T KOG0035|consen 696 DIIFENKHTRYTMEDLKVGWEELLTIIERT 725 (890)
T ss_pred hccccccccccchhhccccccccccccccc
Confidence 222222222233455666677666555543
No 6
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=100.00 E-value=1.6e-44 Score=410.15 Aligned_cols=344 Identities=34% Similarity=0.519 Sum_probs=302.0
Q ss_pred hHHHHHHHHHHHHHHHHccccCCC-CccchhhHhhhcHHHHHHHHHHhcCCCCCCC-CCCCchhHHHhhHHHHHHHHHhc
Q psy18058 47 ADERESVQKKTFQKWVNSHLVRVS-CRIGDLYVDLRDGKMLLKLLEVLSGERLPRP-TKGKMRIHCLENVDKALQFLREQ 124 (2301)
Q Consensus 47 ~~~~~~~q~~~f~~W~n~~l~~~~-~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~-~~~~~~~~~~~N~~~al~~~~~~ 124 (2301)
+.+|+.||+||||+|.|..|...+ ..+.||++|++||+.|+.+|++++.+....+ ..|.+|+|.++|++.+|+|.+..
T Consensus 3 a~kwq~vq~ktftkw~nekL~s~~~~~~~dL~~Dl~dgv~l~qlLe~~~kd~~g~yn~~p~tr~h~~envs~~le~ik~k 82 (612)
T COG5069 3 AKKWQKVQKKTFTKWTNEKLISGGQKEFGDLDTDLKDGVKLAQLLEALQKDNAGEYNETPETRIHVMENVSGRLEFIKGK 82 (612)
T ss_pred hHHHHHHhhccchHHHhHHHhhcccHHHhhhccccccHHHHHHHHHHhhhccccccCCCHHHHHHHhhccccceeeeccC
Confidence 458999999999999999987755 5699999999999999999999998876655 45789999999999999999999
Q ss_pred ccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccccccccccHHHHHHHHHHhHhcCC-CCcccccCCCCccch
Q psy18058 125 RVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMKTAGY-HNVNVRNFTTSWRDG 203 (2301)
Q Consensus 125 ~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~~~~~~~~~~~~ll~W~~~~~~~~-~~~~v~nf~~~~~dg 203 (2301)
|+++.||||.||||||+++||||||++|.+|.|..|.-+. ..+.+.-++.||+..+++| |++++.+|+.||+||
T Consensus 83 g~~l~Nigp~divdGn~klilGliw~lisr~tia~inEeg-----elt~~~~lllwc~~~t~~y~p~vd~~df~rswrdG 157 (612)
T COG5069 83 GVKLFNIGPQDIVDGNPKLILGLIWSLISRLTIATINEEG-----ELTKHINLLLWCDEDTGGYKPEVDTFDFFRSWRDG 157 (612)
T ss_pred CceeeeeCccccccCchhhhheeeeeeeehhhhhcccchh-----hHHhhhhhheeccccccCcCCCccHHHHHHHhhhh
Confidence 9999999999999999999999999999999999995332 4778889999999999999 559999999999999
Q ss_pred hhHHHHHhhhCCCCccccccC--ccCHHHHHHHHHHHHHHhcCCcccccccccc-ccCCChhhHHHHHHHHHHHhhhcch
Q psy18058 204 LAFNAIIHKHRPDLIQFEKLS--KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSKMKQ 280 (2301)
Q Consensus 204 ~~~~~li~~~~p~~~~~~~~~--~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~-~~~~de~si~~yv~~~~~~~~~~~~ 280 (2301)
+|||+|||.++||++|+..++ .++...|...||++|+.-+||+++++.+||+ ++.|||+||||||+.||+.|..+.+
T Consensus 158 Laf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~~pDERsimtyv~~y~~rf~~l~K 237 (612)
T COG5069 158 LAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVSIPDERSIMTYVSWYIIRFGLLEK 237 (612)
T ss_pred HHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecCCcchHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999887 7888999999999999999999999999976 7899999999999999999999999
Q ss_pred hhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhhhhhccCCCchhhhhhH
Q psy18058 281 ETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNL 360 (2301)
Q Consensus 281 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~~~~~~ek~~~~~e~g~l 360 (2301)
..++-.|+..++...+-...+.--||..+..++.-|.-........+|.+.+..+..-..-|..+....+.+.. ++-.|
T Consensus 238 id~al~rv~rllE~~et~~qlrl~yE~~l~rll~~i~~~q~~w~v~~f~k~vsd~en~t~ll~ql~alcsRa~l-ettdl 316 (612)
T COG5069 238 IDIALHRVYRLLEADETLIQLRLPYEIILLRLLNLIHLKQANWKVVNFSKDVSDGENYTDLLNQLNALCSRAPL-ETTDL 316 (612)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccchhhhhhhhhhHHHHHHHHHHHHHHhhcccc-hhhhH
Confidence 88888899888888888888999999999888888887777666667887777666644444444433333333 78889
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccCChhHHHHHHHH
Q psy18058 361 EVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWER 396 (2301)
Q Consensus 361 e~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~W~~ 396 (2301)
..++.+|.+.......+-|.||.|--..++...|-.
T Consensus 317 ~sl~gqi~~n~e~y~~RKY~pPAGnpkldla~~~~l 352 (612)
T COG5069 317 HSLAGQILQNAEKYDCRKYLPPAGNPKLDLAFVAHL 352 (612)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCcccchHHHHhh
Confidence 999999999999888889999999888888877743
No 7
>KOG0046|consensus
Probab=99.96 E-value=3.5e-30 Score=298.01 Aligned_cols=290 Identities=22% Similarity=0.357 Sum_probs=232.4
Q ss_pred HHHHHHHHHHHHcccc---------CCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCC----CCCCchhHHHhhHHHHH
Q psy18058 52 SVQKKTFQKWVNSHLV---------RVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP----TKGKMRIHCLENVDKAL 118 (2301)
Q Consensus 52 ~~q~~~f~~W~n~~l~---------~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~----~~~~~~~~~~~N~~~al 118 (2301)
.-.|..|++|||++|. +.++.-++||..++||++||+||+...|+++... ++..+++.+.||.+.||
T Consensus 118 eeEk~~fv~hIN~~L~~Dpdl~~~lPinp~t~~lf~~vkDGvlLcKlIN~svPdTIDERaiN~kk~Lnp~~~~EN~~l~l 197 (627)
T KOG0046|consen 118 EEEKRAFVNHINSYLEGDPDLKHLLPINPNTNDLFDLVKDGVLLCKLINLSVPDTIDERAINTKKKLNPFERNENLNLAL 197 (627)
T ss_pred HHHHHHHHHHHHHHhcCCcchhhcCCCCCchHHHHHHhccceeeehhhcccCCCchhhhhhccCCcCChhhhccchhhHH
Confidence 4568899999999774 4566788999999999999999999999987633 44567899999999999
Q ss_pred HHHHhcccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccc-------------cccccccHHHHHHHHHHhHh
Q psy18058 119 QFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEET-------------DNQETKSAKDALLLWCQMKT 185 (2301)
Q Consensus 119 ~~~~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~-------------~~~~~~~~~~~ll~W~~~~~ 185 (2301)
+.++..||.+||||++||.+|.++++|||||+||+...+.+|.+... +...++||+++||+|+|-+.
T Consensus 198 nSAkAiGc~VvNIga~Dl~eGrphLVLGLiwQiIkiglladi~l~~~p~L~~Ll~d~e~lEelm~L~PEkiLLrW~N~HL 277 (627)
T KOG0046|consen 198 NSAKAIGCTVVNIGAQDLAEGRPHLVLGLIWQIIKIGLLADINLKKNPQLVRLLEDGETLEELMRLPPEKILLRWMNYHL 277 (627)
T ss_pred hhcccccceEEecCchhhhcCCceeeHHHHHHHHHHHHhhhcccccCHHHHHHHhCCccHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999976532 23667899999999999654
Q ss_pred --cCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccCccCHHHHHHHHHHHHHHhcCCccccccccccccCCChhh
Q psy18058 186 --AGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKS 263 (2301)
Q Consensus 186 --~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~~~~~de~s 263 (2301)
++| ...++||++++.||.++..|++...|...+...+...++.++++..++-|+ ++||.++++|.||+.|+| +.
T Consensus 278 ~kag~-~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d~l~RA~~vLq~Ae-kl~Cr~~ltp~dvV~G~~--kL 353 (627)
T KOG0046|consen 278 KKAGW-KKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETDDLERAELVLQQAE-KLDCRRYLTPTDVVAGNP--KL 353 (627)
T ss_pred Hhccc-ceehhhhhhhhccHHHHHHHHHHhccccCCccccccCChHhHHHHHHHHHH-hcCCccccCHHHHhcCCc--hh
Confidence 566 578999999999999999999999999999999999999999999999995 999999999999999999 99
Q ss_pred HHHHHHHHHHHhhhcchhhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHh
Q psy18058 264 IITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFN 343 (2301)
Q Consensus 264 i~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~ 343 (2301)
.++||+.+|+.++.++...-.. + .|......+-.+....+-.||+.--....-.++..++...--.++-|.
T Consensus 354 NLAFVA~lFn~~pgL~~~~~~~--~-------~e~~~~~~~~~reer~fr~WmNSlgv~p~vn~~f~Dl~dglVllq~~d 424 (627)
T KOG0046|consen 354 NLAFVANLFNTHPGLEKPENEE--I-------AEMMTEDEEESREERTFRLWMNSLGVNPYVNNLFEDLRDGLVLLQLYD 424 (627)
T ss_pred hHHHHHHhcccCCCCCCccccc--h-------hcccchhHhHHHHHHHHHHHHHhcCCcHHHHHHHHhhhhhhHHHHHHH
Confidence 9999999999999887533111 0 111122223345667788899863222222223344544445555555
Q ss_pred -------hhhhccCCCch
Q psy18058 344 -------NYRTVEKPPKF 354 (2301)
Q Consensus 344 -------~~~~~ek~~~~ 354 (2301)
.++++.|||.+
T Consensus 425 ki~pg~Vnwk~vnKp~~~ 442 (627)
T KOG0046|consen 425 KVSPGSVNWKHVNKPPSP 442 (627)
T ss_pred HccCCccchhhccCCCCc
Confidence 34446666533
No 8
>KOG0046|consensus
Probab=99.95 E-value=1.8e-28 Score=284.00 Aligned_cols=219 Identities=28% Similarity=0.500 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCC-----CC-CCCCchhHHHhhHHHHHHHH
Q psy18058 48 DERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP-----RP-TKGKMRIHCLENVDKALQFL 121 (2301)
Q Consensus 48 ~~~~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~-----~~-~~~~~~~~~~~N~~~al~~~ 121 (2301)
++-+....++|++|+|| ..+.++|+++|.|++||.+|..++++++|..+. +| +.-+|.+.++||||.|++..
T Consensus 383 ~~~~~reer~fr~WmNS--lgv~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnKp~~~~~~~~kklENcNyav~lG 460 (627)
T KOG0046|consen 383 DEEESREERTFRLWMNS--LGVNPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKVENCNYAVKLG 460 (627)
T ss_pred hHhHHHHHHHHHHHHHh--cCCcHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccCCCCcccccHHHhhcchHHHHHH
Confidence 34467888999999999 678899999999999999999999999997653 33 22356799999999999999
Q ss_pred HhcccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccccccccccHHHHHHHHHHhHhc-CCCCcccccCC-CC
Q psy18058 122 REQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMKTA-GYHNVNVRNFT-TS 199 (2301)
Q Consensus 122 ~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~~~~~~~~~~~~ll~W~~~~~~-~~~~~~v~nf~-~~ 199 (2301)
++++..+|||.+.||+|||.++||+|+|++||+|.++.+.--.. .......+.++.|+|.+.. +.....|.+|. .+
T Consensus 461 k~~~FSLVgi~G~DI~dGNk~LtLAlvWQLMR~ytL~vL~~l~~--~~~~~tD~dIv~WaN~klk~~Gk~s~IrSFkD~s 538 (627)
T KOG0046|consen 461 KQLKFSLVGIAGQDIVDGNKTLTLALVWQLMRRYTLQVLKSLRS--GGKDITDSDIVNWANRKLKKAGKKSQIRSFKDKS 538 (627)
T ss_pred hhcceeeeccccccccccchHhHHHHHHHHHHHHHHHHHHHHhh--cCCCCcHHHHHHHHHHHHHhcCCccccccccCcc
Confidence 99999999999999999999999999999999999887743222 1223455678999996654 33577899995 79
Q ss_pred ccchhhHHHHHhhhCCCCccccccCcc----CHHHHHHHHHHHHHHhcCCccccccccccccCCChhhHHHHHHHHHH
Q psy18058 200 WRDGLAFNAIIHKHRPDLIQFEKLSKS----NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYH 273 (2301)
Q Consensus 200 ~~dg~~~~~li~~~~p~~~~~~~~~~~----~~~~n~~~a~~~a~~~lgi~~~l~~edv~~~~~de~si~~yv~~~~~ 273 (2301)
.+||++|..||+++.|+.|+|+-+++. ++..|+.||+++| +++|+..++-||||+..+| |.|||+.+++|.
T Consensus 539 iS~g~~vLDLidaI~P~~Vn~~LV~~G~t~EdK~~NAkYaIS~A-RKiGa~IyaLPEDIvEV~p--KMvltvfA~lM~ 613 (627)
T KOG0046|consen 539 ISDGLFVLDLLDAIKPGVVNYSLVTSGNTDEEKLLNAKYAISVA-RKLGASIYALPEDIVEVNP--KMVLTVFASLMA 613 (627)
T ss_pred cccCcchHHHHhhcCcCccchhhccCCCChhhhhhcchhhHhHH-HhhCceEEeccHHHhhhch--hhhHHHHHHHHH
Confidence 999999999999999999999988554 6889999999999 7999999999999999999 999999999885
No 9
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.92 E-value=3.3e-25 Score=220.58 Aligned_cols=114 Identities=28% Similarity=0.511 Sum_probs=103.1
Q ss_pred ceEeEecceeeeccCCccCC--CCCCceEEEEEeCcEEEEEecCCCCCCCCCccC-CCCcceeccCcccccccCCCCCCc
Q psy18058 2156 HMEGTLVRKHEWEAIAKRAS--NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYY-KNETPFELRGGSAQVADDYSKKKH 2232 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~--~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~-~~~~~i~l~~a~~~~~~d~~kr~~ 2232 (2301)
+++|+|.||++++++|||++ .|+|+++||||+|+.|+||||++.. ..+..+ +...+|+|.+|.|.++.||+||+|
T Consensus 1 ~~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~--~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~ 78 (117)
T cd01230 1 YKHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKP--GKSLSETELKNAISIHHALATRASDYSKKPH 78 (117)
T ss_pred CCCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCccc--ccccccccccceEEeccceeEeeccccCCCc
Confidence 58999999999999999986 8999999999999999999999843 222222 567899999999999999999999
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHhhcCC
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASG 2271 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~~~~ 2271 (2301)
||+|++++|.+|||||+|.++|+.||.+|+.+++..++|
T Consensus 79 VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s~p 117 (117)
T cd01230 79 VFRLRTADWREFLFQTSSLKELQSWIERINVVAAAFSAP 117 (117)
T ss_pred EEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999999977664
No 10
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.91 E-value=7e-25 Score=224.13 Aligned_cols=111 Identities=45% Similarity=0.792 Sum_probs=83.0
Q ss_pred ceEeEecceeeeccCCccC--CCCCCceEEEEEeCcEEEEEecCCCCCCC------CCccCCCCcceeccCcccccccCC
Q psy18058 2156 HMEGTLVRKHEWEAIAKRA--SNRSWDKIFVSLRGTLLYFYKDQKSAKSS------PEIYYKNETPFELRGGSAQVADDY 2227 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~--~~r~W~~~~~vL~~~~L~~ykd~~~~~~~------~~~~~~~~~~i~l~~a~~~~~~d~ 2227 (2301)
++||||.||++++++|||+ +.|+|+.+|+||+|+.|+||||....... +.....|..+|+|.+|.|+++.||
T Consensus 1 ~keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~dY 80 (119)
T PF15410_consen 1 YKEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASDY 80 (119)
T ss_dssp --EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETTB
T ss_pred CceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCccc
Confidence 4899999999999999999 99999999999999999999996432211 111234566799999999999999
Q ss_pred CCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2228 ~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
+||+|||+|+|++|++|||||.|+++|.+||.+||.+++
T Consensus 81 ~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~AA 119 (119)
T PF15410_consen 81 TKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAAA 119 (119)
T ss_dssp TTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH--
T ss_pred ccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999999999999864
No 11
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=2.7e-19 Score=180.68 Aligned_cols=103 Identities=53% Similarity=0.895 Sum_probs=93.1
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|+|.||++++++||+++.++|+++||||+|+.|+||+|++..... ..+..+|++.++.++++.+|+||+|||+|
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~----~~~~~~i~l~~~~i~~~~~~~k~~~~F~l 76 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAEN----VHGEPPVDLTGAQCEVASDYTKKKHVFRL 76 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccC----CCCCCcEeccCCEEEecCCcccCceEEEE
Confidence 58999999999999999999999999999999999999998732111 14456899999999999999999999999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
++++|.+|+|+|+|+++|..||.+|++
T Consensus 77 ~~~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 77 RLPDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred EecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 999999999999999999999999975
No 12
>KOG0932|consensus
Probab=99.78 E-value=8.9e-20 Score=212.34 Aligned_cols=135 Identities=25% Similarity=0.400 Sum_probs=116.9
Q ss_pred CCCCCCccceEeEecceeeeccCCccC--CCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc
Q psy18058 2148 PTSGADADHMEGTLVRKHEWEAIAKRA--SNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD 2225 (2301)
Q Consensus 2148 ~~~~~~~~~~eG~L~rK~~~~~~~k~~--~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~ 2225 (2301)
+|+|+.++++.|||.||.+.+.+|||. +.|+|+.+|.||+|..|||-||......+.... .-...|+++||.+..|.
T Consensus 499 ~~dpsa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~-~lknavsvHHALAt~At 577 (774)
T KOG0932|consen 499 PPDPSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSES-DLKNAVSVHHALATPAT 577 (774)
T ss_pred CCCCCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhh-hhhhhhhhhhhhcCCCc
Confidence 667789999999999999999999997 789999999999999999999986443332111 12348999999999999
Q ss_pred CCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHhhcCCCCCCCCcCCccc
Q psy18058 2226 DYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAA 2283 (2301)
Q Consensus 2226 d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~~~~~~~~~~~~~p~~ 2283 (2301)
||+||+|||+|+|+||++|||||++.++|.+||..||-+++.+++|+.++...+.|..
T Consensus 578 dY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSaPpfPaaV~Sqkkf 635 (774)
T KOG0932|consen 578 DYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSAPPFPAAVGSQKKF 635 (774)
T ss_pred ccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccCCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999998887776664433
No 13
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.67 E-value=1.3e-14 Score=170.25 Aligned_cols=209 Identities=27% Similarity=0.512 Sum_probs=192.8
Q ss_pred HHHHHHhHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHH
Q psy18058 1174 LQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253 (2301)
Q Consensus 1174 lq~f~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l 1253 (2301)
++.|..++..+..||...|..|.....|.++..++.++++|+.|..++..+.+.++.++..|..|+..+++++..|..++
T Consensus 2 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~ 81 (213)
T cd00176 2 LQQFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQERL 81 (213)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 57899999999999999999998877777999999999999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccc-hhhhHhHHHHHHHHHHHHHHHHHhHHH
Q psy18058 1254 DNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDET-YRSAKTVHSKWTRHQAFEAEIASNKDR 1332 (2301)
Q Consensus 1254 ~~l~~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~-~~d~~~l~~~l~khq~~~~El~~~~~~ 1332 (2301)
+.|+.+|+.|+..+..|...|+.++....|++.+.++..||.+........+ ..++..++.++..|++|..++...++.
T Consensus 82 ~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 161 (213)
T cd00176 82 EELNQRWEELRELAEERRQRLEEALDLQQFFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKHKELEEELEAHEPR 161 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHhchHH
Confidence 9999999999999999999999999998888888889999998875543322 236889999999999999999999999
Q ss_pred HHHHHHHHhHHHhhCCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy18058 1333 LLRVQQSGSELMKEKPELA-ELIGPKISDLGQQFDDLETTTKDKGERLFDS 1382 (2301)
Q Consensus 1333 l~~l~~~g~~L~~~~~~~~-~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a 1382 (2301)
++.+...|..|+...++.. ..|...+..|..+|..|...+..+...|..+
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 162 LKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887666 8899999999999999999999999998764
No 14
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.66 E-value=1.7e-14 Score=169.30 Aligned_cols=210 Identities=30% Similarity=0.537 Sum_probs=195.9
Q ss_pred HHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q psy18058 1385 EVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKK 1464 (2301)
Q Consensus 1385 ~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~ 1464 (2301)
+..|...+.++..||...+..|.+...+.|+..++.++++|+.|..++..+.+.++.+...|..|...+++++..|...+
T Consensus 2 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~ 81 (213)
T cd00176 2 LQQFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQERL 81 (213)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 46799999999999999999999876666999999999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccccCcccCCCHHHHHHHHHHHHHHHHHHhcChhH
Q psy18058 1465 SAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPR 1544 (2301)
Q Consensus 1465 ~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~~~~Wl~e~~~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~~~~~ 1544 (2301)
+.|+.+|..|...+..|...|+..+..++|+.++.+...||.+.+........+.++..++.++..|+.|..+|..+++.
T Consensus 82 ~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 161 (213)
T cd00176 82 EELNQRWEELRELAEERRQRLEEALDLQQFFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKHKELEEELEAHEPR 161 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHhchHH
Confidence 99999999999999999999999999999999888888999998776666555558999999999999999999999999
Q ss_pred HHHHHHhHhHhhhcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1545 INLICNNGRKLIDEGHEDS-AEFTSLIEDLMDRWQQLKKAVDERRSKLIQS 1594 (2301)
Q Consensus 1545 i~~v~~~g~~Li~~~~~~~-~~I~~~l~~L~~~w~~L~~~~~~R~~~L~~a 1594 (2301)
++.+...|..|+..+++.. ..|...+..|..+|..|...+..|...|+.+
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 162 LKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998888866 8999999999999999999999999999764
No 15
>KOG3631|consensus
Probab=99.65 E-value=8.1e-16 Score=163.91 Aligned_cols=219 Identities=20% Similarity=0.263 Sum_probs=170.7
Q ss_pred HHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCCCCchh---HHHhhHHHHHHHHHhcccccccC
Q psy18058 55 KKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRI---HCLENVDKALQFLREQRVHLENM 131 (2301)
Q Consensus 55 ~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~~~~~~---~~~~N~~~al~~~~~~~~~l~~i 131 (2301)
-|+...|||..|.+..+.|.+|.+||.||.+|-+|+|+|.+.++..+....+.+ |+++-|-.|++-.-...-.-..+
T Consensus 92 ~kvLi~WiN~~L~~erIvVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse~~QkqKLq~Vleavnr~L~~~~~q~kW 171 (365)
T KOG3631|consen 92 VKVLIDWINDVLVPERIVVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSEIGQKQKLQTVLEAVNRSLQLPEWQAKW 171 (365)
T ss_pred HHHHHHHHHHhhcchhhhHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHHhcCchhhhcc
Confidence 368999999999998899999999999999999999999999998775554444 55555544444333333334458
Q ss_pred CcccccCCcchhhHHHHHHHHhhhhh----------cccccccccc----------------------------------
Q psy18058 132 GSHDIVDGNPRLSLGLIWTIILRFQI----------QDITIEETDN---------------------------------- 167 (2301)
Q Consensus 132 ~~~di~~g~~~~~Lgliw~ii~~~~~----------~~~~~~~~~~---------------------------------- 167 (2301)
+++.|...+...||.|+-.+..||+. +.+.+....+
T Consensus 172 svdsIh~Kdl~ailhLLVaLa~~frapirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~~~~~rDaFDtLFd~a 251 (365)
T KOG3631|consen 172 SVDSIHNKDLVAILHLLVALAKHFRAPIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLDGRPERDAFDTLFDHA 251 (365)
T ss_pred chhhhccchHHHHHHHHHHHHHHcCCCccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhcCCCchhhHHHHHhhC
Confidence 99999999999999999999999983 2222221110
Q ss_pred cccc-cHHHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCcccccc-----CccCHHHHHHHHHHHHHH
Q psy18058 168 QETK-SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKL-----SKSNAIYNLNNAFTVAED 241 (2301)
Q Consensus 168 ~~~~-~~~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~-----~~~~~~~n~~~a~~~a~~ 241 (2301)
+.+. .+|+.|+.+||.+.... |+.|+|+.+.|.||..+.-|+.......++...| +....++|+.+||+.+++
T Consensus 252 PdKln~VK~sli~FvNkhLnkl-nLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVsfAfeLm~D 330 (365)
T KOG3631|consen 252 PDKLNVVKKSLITFVNKHLNKL-NLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVSFAFELMKD 330 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhhhc-cceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHHHHHHHHHc
Confidence 0011 36889999999999886 8999999999999999999999988888876655 344689999999999974
Q ss_pred hcCCccccccccccccCCChhhHHHHHHHHHHHhh
Q psy18058 242 KLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFS 276 (2301)
Q Consensus 242 ~lgi~~~l~~edv~~~~~de~si~~yv~~~~~~~~ 276 (2301)
..--.+...|+||+ +.|-||.+..+..+|..|.
T Consensus 331 ~GL~kp~~rpeDIv--N~D~KSTLRvLy~LFtKyk 363 (365)
T KOG3631|consen 331 GGLEKPKVRPEDIV--NKDLKSTLRVLYNLFTKYK 363 (365)
T ss_pred cCcCCCCCChHHhh--cccHHHHHHHHHHHHHhhc
Confidence 44447889999999 4566999988888877664
No 16
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.54 E-value=9.2e-15 Score=149.60 Aligned_cols=103 Identities=35% Similarity=0.596 Sum_probs=95.6
Q ss_pred HHHHHHHHHHccccCCCC-ccchhhHhhhcHHHHHHHHHHhcCCCCCCCCC-CCchhHHHhhHHHHHHHHHhcccccccC
Q psy18058 54 QKKTFQKWVNSHLVRVSC-RIGDLYVDLRDGKMLLKLLEVLSGERLPRPTK-GKMRIHCLENVDKALQFLREQRVHLENM 131 (2301)
Q Consensus 54 q~~~f~~W~n~~l~~~~~-~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~-~~~~~~~~~N~~~al~~~~~~~~~l~~i 131 (2301)
|++++++|||.++...+. .|+|+.+||+||++||+|++.++|..++.... +.+++++++|++.+|++++..||+..++
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~gi~~~~~ 81 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAEKLGVPVVNF 81 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHHHcCCceecc
Confidence 688999999999988876 79999999999999999999999999876543 6789999999999999999999998789
Q ss_pred Cccccc-CCcchhhHHHHHHHHhhhh
Q psy18058 132 GSHDIV-DGNPRLSLGLIWTIILRFQ 156 (2301)
Q Consensus 132 ~~~di~-~g~~~~~Lgliw~ii~~~~ 156 (2301)
.++||+ +||.+.|++++|+|+++|.
T Consensus 82 ~~~Dl~~~~n~~~vl~~l~~l~~~~~ 107 (107)
T cd00014 82 DAEDLVEDGDEKLVLGLLWSLIRKFL 107 (107)
T ss_pred CHHHHhhCCCceeeHHHHHHHHHhhC
Confidence 999999 9999999999999999883
No 17
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.51 E-value=2e-14 Score=146.08 Aligned_cols=98 Identities=37% Similarity=0.572 Sum_probs=90.3
Q ss_pred HHHHHHHHHccccCC-CCccchhhHhhhcHHHHHHHHHHhcCCCCCCCC--CCCchhHHHhhHHHHHHHHHhcccccccC
Q psy18058 55 KKTFQKWVNSHLVRV-SCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT--KGKMRIHCLENVDKALQFLREQRVHLENM 131 (2301)
Q Consensus 55 ~~~f~~W~n~~l~~~-~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~--~~~~~~~~~~N~~~al~~~~~~~~~l~~i 131 (2301)
+++|++|||+++... +..|+|++++|+||++||+|++.++|+.+|... .|++++++++|++.+++++++.|+..+++
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~g~~~~~~ 81 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKLGGKLVLF 81 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHcCCeeecc
Confidence 578999999999887 478999999999999999999999999987543 46778999999999999999999889999
Q ss_pred CcccccCCcchhhHHHHHHHHh
Q psy18058 132 GSHDIVDGNPRLSLGLIWTIIL 153 (2301)
Q Consensus 132 ~~~di~~g~~~~~Lgliw~ii~ 153 (2301)
.++||++|+ +.+++++|+|+.
T Consensus 82 ~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 82 EPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred CHHHHhhcc-hHHHHHHHHHHh
Confidence 999999999 999999999985
No 18
>KOG4286|consensus
Probab=99.47 E-value=1.6e-11 Score=149.20 Aligned_cols=308 Identities=14% Similarity=0.220 Sum_probs=237.4
Q ss_pred HHHHHhchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHH
Q psy18058 1597 AQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQ 1676 (2301)
Q Consensus 1597 ~qqf~~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~~i~~~~ 1676 (2301)
.+.|-.++.+++.|+-.-.. .....-+|........+..+.+..++++ ..+...++.|+.......+.+.-.
T Consensus 3 ~q~~~~~l~~f~~w~l~d~~--~~~~~l~dt~~~~~~~~~~~~~~~e~~a-----~~v~~~~~kl~~~l~~~~~~~~l~- 74 (966)
T KOG4286|consen 3 LQQFPLDLEKFLAWLLQDAT--RKERLLEDSKGVKELMKQWQDLQGEIEA-----HNLDENSQKILRSLEGSDDAVLLQ- 74 (966)
T ss_pred hhhhhhhHHHHHHHHHhhhh--hhHhhhhcccccHHHHHHHhcccccccc-----ccCchHHHHHHHHhcCCccchHHH-
Confidence 46788999999999922111 1111223333345555566666666665 345566677766543333334333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhh-ccccCCCChHHHHHHHHHHHHHHHHHhhhh
Q psy18058 1677 SQVDKLYAGLKDLAGERRAKLDEALKLF-MLNREVDDLEQWIAEREVVA-GSHELGQDYDHVTLLWERFKEFDRDTEAIG 1754 (2301)
Q Consensus 1677 ~~l~~~~~~L~~~~~~R~~~Le~~~~~~-qf~~e~~~l~~Wi~~~e~~~-~s~~~g~d~e~v~~l~~k~~~f~~e~~~~~ 1754 (2301)
.++.+|+.|+.++..-+.+|+.+-+.+ .+..-+.+|..|+.-+...+ ...++|+|+..|...-+-++.|++|+.+.
T Consensus 75 -~mn~~w~~l~kks~~ir~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~re~k~k- 152 (966)
T KOG4286|consen 75 -LMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK- 152 (966)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhhc-
Confidence 499999999999999999999999988 89999999999999987755 45678999999999999999999999764
Q ss_pred chHHHHHHHHHHHHHHcCCC----------C----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHh
Q psy18058 1755 TERVAAVNGIADQLIAAGHS----------D----------SATIAEWKDGLNEAWQDLLELIETRTQMLVASRE-LHKF 1813 (2301)
Q Consensus 1755 ~~rv~~v~~~~~~L~~~~~~----------~----------~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~f 1813 (2301)
.+.+-++.+.|..++...+- + +..+...-..+++.|+.|.-.+..+.+.++.+++ +...
T Consensus 153 ~~~~~s~~e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v~~~le~l~el 232 (966)
T KOG4286|consen 153 EPVIMSTLETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL 232 (966)
T ss_pred ccHHHHHHHHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Confidence 56676676777766543221 1 1123445578999999999999999999999998 8888
Q ss_pred hhcHHHHHHhHHHHhhhCccc--cCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHH
Q psy18058 1814 FHDCKDILGRISEKHHAMSDE--LGR-DAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREA 1890 (2301)
Q Consensus 1814 ~~d~~e~l~wi~ek~~~l~~~--~g~-d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~ 1890 (2301)
...++++..-+.+.+.....+ +|. -+++++..+.+.+.|..+++.+..-|+.+++.|.+|....-.. ...-...++
T Consensus 233 q~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql~~~d~~l-s~~~~~~le 311 (966)
T KOG4286|consen 233 QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLDIQL-SPYNLSTLE 311 (966)
T ss_pred HHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHhhhcccCC-ChhhHhhHH
Confidence 899999999999887766543 332 2478999999999999999999999999999999998765433 355667889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHH
Q psy18058 1891 EVVNAWASLQNACDARKQKLGDTGD 1915 (2301)
Q Consensus 1891 ~v~~~W~~L~~~~~~R~~~L~~a~~ 1915 (2301)
.|+.+|+.|+..+..|..+|..|+.
T Consensus 312 ~~n~rwk~Lq~SV~~rl~qlrna~~ 336 (966)
T KOG4286|consen 312 DLNTRWKLLQVSVPDRLTQLRNAHR 336 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 19
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.46 E-value=1.7e-13 Score=140.48 Aligned_cols=102 Identities=31% Similarity=0.600 Sum_probs=91.4
Q ss_pred HHHHHHHHHhHhcCC-CCcccccCCCCccchhhHHHHHhhhCCCCccccccCcc-----CHHHHHHHHHHHHHHhcCCcc
Q psy18058 174 KDALLLWCQMKTAGY-HNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS-----NAIYNLNNAFTVAEDKLGLTK 247 (2301)
Q Consensus 174 ~~~ll~W~~~~~~~~-~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~-----~~~~n~~~a~~~a~~~lgi~~ 247 (2301)
++.|+.|||..+..+ ++.+|+||.++|+||++||.||+.+.|+.+++..+.+. +..+|++.+++++++.+|+|.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 468999999999877 36899999999999999999999999999999998543 789999999999987799999
Q ss_pred ccccccccccCCChhhHHHHHHHHHHHhh
Q psy18058 248 LLDAEDIFVEQPDEKSIITYVVTYYHYFS 276 (2301)
Q Consensus 248 ~l~~edv~~~~~de~si~~yv~~~~~~~~ 276 (2301)
.++|+|+.. .+|++.||+|++.+|++|.
T Consensus 81 ~~~~~dl~~-~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LLSPEDLVE-KGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS-HHHHHS-TT-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHH-CcCHHHHHHHHHHHHHHHC
Confidence 999999986 7888999999999999984
No 20
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.42 E-value=5.1e-13 Score=132.77 Aligned_cols=95 Identities=25% Similarity=0.469 Sum_probs=79.3
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|||.+|.. .+| ...++|+++||||+|+.|+||+++... .+.+.|+|.++.+..+.+ .+++|+|.|
T Consensus 2 ~~GwL~kk~~--~~g--~~~k~WkkrwfvL~~~~L~yyk~~~~~--------~~~~~I~L~~~~v~~~~~-~~k~~~F~I 68 (96)
T cd01260 2 CDGWLWKRKK--PGG--FMGQKWARRWFVLKGTTLYWYRSKQDE--------KAEGLIFLSGFTIESAKE-VKKKYAFKV 68 (96)
T ss_pred ceeEEEEecC--CCC--ccccCceeEEEEEECCEEEEECCCCCC--------ccceEEEccCCEEEEchh-cCCceEEEE
Confidence 6899999831 112 147899999999999999999998732 456789999998887766 358899999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.+++...|+|+|+|++++..||.+|+.|
T Consensus 69 ~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 69 CHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred CCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 9998789999999999999999999764
No 21
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.39 E-value=7e-13 Score=136.02 Aligned_cols=101 Identities=29% Similarity=0.467 Sum_probs=88.7
Q ss_pred HHHHHHHHHccccCC--CCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCC-C--CchhHHHhhHHHHHHHHHh-ccccc
Q psy18058 55 KKTFQKWVNSHLVRV--SCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTK-G--KMRIHCLENVDKALQFLRE-QRVHL 128 (2301)
Q Consensus 55 ~~~f~~W~n~~l~~~--~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~-~--~~~~~~~~N~~~al~~~~~-~~~~l 128 (2301)
++++.+|||++|... +..|.|+++||+||++||+|++.+.|..++.... | ++.+++++|++.+++++++ .|++.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 578999999999887 6789999999999999999999999998753322 1 2789999999999999999 99998
Q ss_pred ccCCccccc-CCcchhhHHHHHHHHhhhh
Q psy18058 129 ENMGSHDIV-DGNPRLSLGLIWTIILRFQ 156 (2301)
Q Consensus 129 ~~i~~~di~-~g~~~~~Lgliw~ii~~~~ 156 (2301)
.. .++||+ +||.+.||+++|+|+.+|+
T Consensus 81 ~~-~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LL-SPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS--HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CC-CHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 87 999999 9999999999999999985
No 22
>KOG4286|consensus
Probab=99.38 E-value=8.5e-11 Score=142.98 Aligned_cols=305 Identities=17% Similarity=0.216 Sum_probs=242.3
Q ss_pred HHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCChhhHHHH
Q psy18058 641 WQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQ--QHFGADRIRGR 718 (2301)
Q Consensus 641 ~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~--~~~~~~~I~~~ 718 (2301)
..|..++.++..|+-.... +....-+|........+..+.+..++.+ ..+-..+..|+.. +..++-.+.
T Consensus 4 q~~~~~l~~f~~w~l~d~~--~~~~~l~dt~~~~~~~~~~~~~~~e~~a-----~~v~~~~~kl~~~l~~~~~~~~l~-- 74 (966)
T KOG4286|consen 4 QQFPLDLEKFLAWLLQDAT--RKERLLEDSKGVKELMKQWQDLQGEIEA-----HNLDENSQKILRSLEGSDDAVLLQ-- 74 (966)
T ss_pred hhhhhhHHHHHHHHHhhhh--hhHhhhhcccccHHHHHHHhcccccccc-----ccCchHHHHHHHHhcCCccchHHH--
Confidence 5788899999999922111 1111223455566777778888888887 4555667777663 333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhhhcc-CCCCChHhHHHHHHHhHHHHHHHHHh
Q psy18058 719 LQDTMAMWQNLLDLAAFRRKRLEEAVDF-HQFFADAVDVDIWMLDTVRLVSSE-DVGRDEANVQSLLKKHKDVTEELKNY 796 (2301)
Q Consensus 719 l~~l~~~w~~L~~~~~~R~~~Le~a~~~-~qf~~~~~el~~Wl~e~~~~l~~~-~~g~d~~~~~~ll~kh~~l~~el~~~ 796 (2301)
.++.+|..|+.....-+.+|+.+..- .+....+.++.+|+..+...+..+ ++|+|...++.+-..|++|..||.+.
T Consensus 75 --~mn~~w~~l~kks~~ir~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~re~k~k 152 (966)
T KOG4286|consen 75 --LMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK 152 (966)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 39999999999999999999998875 567778999999999887777764 79999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCC------------Ch---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q psy18058 797 ASTIEALRNQASQLGDQDKE------------SP---------EVLERLASIEFRYKELLELAKLRKQRLLDALS-LYKL 854 (2301)
Q Consensus 797 ~~~i~~L~~~~~~L~~~~~~------------~~---------~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~-l~~~ 854 (2301)
...+.+..+.|..+...++- .+ .+......+...|.+|...+....+.++.++. +...
T Consensus 153 ~~~~~s~~e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v~~~le~l~el 232 (966)
T KOG4286|consen 153 EPVIMSTLETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL 232 (966)
T ss_pred ccHHHHHHHHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Confidence 99999999999987543220 11 13455578889999999999999999999884 5666
Q ss_pred HHhHhHHHHHHHHHHHhhcccCCC--CChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHH
Q psy18058 855 FSEADGVQQWIGEKDRMLATMVPG--KDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQ 932 (2301)
Q Consensus 855 ~~e~~~l~~Wl~e~e~~l~~~~~~--~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~ 932 (2301)
...++++..-|.+.|....+..|- --++++...+++.+.|..++......|..||.++.+|....---+..-...+++
T Consensus 233 q~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql~~~d~~ls~~~~~~le~ 312 (966)
T KOG4286|consen 233 QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLDIQLSPYNLSTLED 312 (966)
T ss_pred HHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHhhhcccCCChhhHhhHHH
Confidence 667799999999999999888773 345778888899999999999999999999999999987664345566788999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHh
Q psy18058 933 LNHDWAGLREKAEGKRDELNSAHG 956 (2301)
Q Consensus 933 L~~rw~~l~~~~~~r~~~L~~a~~ 956 (2301)
+|.||..|+..+..|..+|..+.+
T Consensus 313 ~n~rwk~Lq~SV~~rl~qlrna~~ 336 (966)
T KOG4286|consen 313 LNTRWKLLQVSVPDRLTQLRNAHR 336 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997754
No 23
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.36 E-value=2.3e-12 Score=128.06 Aligned_cols=95 Identities=27% Similarity=0.432 Sum_probs=79.0
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC---CCCC
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY---SKKK 2231 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~---~kr~ 2231 (2301)
|.++|||.+| ||+ .++|+++||||+++.|+|||+.+.. .+.+.|+|.++.+....+- .+++
T Consensus 2 v~k~G~L~Kk-----g~~---~k~WkkRwfvL~~~~L~yyk~~~~~--------~~~~~I~L~~~~v~~~~~~~~~~~~~ 65 (100)
T cd01233 2 VSKKGYLNFP-----EET---NSGWTRRFVVVRRPYLHIYRSDKDP--------VERGVINLSTARVEHSEDQAAMVKGP 65 (100)
T ss_pred cceeEEEEee-----CCC---CCCcEEEEEEEECCEEEEEccCCCc--------cEeeEEEecccEEEEccchhhhcCCC
Confidence 5689999888 554 3889999999999999999998721 4567899998877766542 2478
Q ss_pred ceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2232 ~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
|+|.|.+++ +.|+|+|+|+++|.+||.+|+..++
T Consensus 66 ~~F~I~t~~-rt~~~~A~s~~e~~~Wi~ai~~~~~ 99 (100)
T cd01233 66 NTFAVCTKH-RGYLFQALSDKEMIDWLYALNPLYA 99 (100)
T ss_pred cEEEEECCC-CEEEEEcCCHHHHHHHHHHhhhhhc
Confidence 999998885 5899999999999999999988654
No 24
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.36 E-value=6e-13 Score=136.16 Aligned_cols=102 Identities=33% Similarity=0.552 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCcccccc---CccCHHHHHHHHHHHHHHhcCCccc-
Q psy18058 173 AKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKL---SKSNAIYNLNNAFTVAEDKLGLTKL- 248 (2301)
Q Consensus 173 ~~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~---~~~~~~~n~~~a~~~a~~~lgi~~~- 248 (2301)
.+..++.|||..+..+..+.|+||.++|+||.+||+|++.+.|+.+++... ......+|++.+++.|+ .+|||..
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~-~~gi~~~~ 80 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAE-KLGVPVVN 80 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHH-HcCCceec
Confidence 568899999999999866689999999999999999999999999987763 55678999999999996 5999998
Q ss_pred cccccccccCCChhhHHHHHHHHHHHhh
Q psy18058 249 LDAEDIFVEQPDEKSIITYVVTYYHYFS 276 (2301)
Q Consensus 249 l~~edv~~~~~de~si~~yv~~~~~~~~ 276 (2301)
++|+|+.. .+|.++||+|++.++++|.
T Consensus 81 ~~~~Dl~~-~~n~~~vl~~l~~l~~~~~ 107 (107)
T cd00014 81 FDAEDLVE-DGDEKLVLGLLWSLIRKFL 107 (107)
T ss_pred cCHHHHhh-CCCceeeHHHHHHHHHhhC
Confidence 99999985 6777999999999999874
No 25
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.29 E-value=1.2e-11 Score=119.61 Aligned_cols=95 Identities=19% Similarity=0.405 Sum_probs=76.3
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCC----CCc
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK----KKH 2232 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~k----r~~ 2232 (2301)
.+|+|..+ ||+=-..++|+++||||+|+.|+|||+.... . .+.++|+|..|....+.+-.+ ++|
T Consensus 2 ~~G~l~k~-----~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~--~-----~~~g~IdL~~~~sVk~~~~~~~~~~~~~ 69 (101)
T cd01264 2 IEGQLKEK-----KGRWRFIKRWKTRYFTLSGAQLLFQKGKSKD--D-----PDDCSIDLSKIRSVKAVAKKRRDRSLPK 69 (101)
T ss_pred cceEEeec-----CccceeeecceeEEEEEeCCEEEEEeccCcc--C-----CCCceEEcccceEEeeccccccccccCc
Confidence 58999777 6642237899999999999999999988621 1 123799999998776553222 369
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.|.+.|++ .+|+|+|+|+.++++||++|+.|
T Consensus 70 ~Fei~tp~-rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 70 AFEIFTAD-KTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred EEEEEcCC-ceEEEEeCCHHHHHHHHHHHHhh
Confidence 99999998 59999999999999999999876
No 26
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=99.27 E-value=2.9e-11 Score=140.34 Aligned_cols=266 Identities=18% Similarity=0.175 Sum_probs=199.3
Q ss_pred HHHHHHHccccC--------CCCccchhhHhhhcHHHHHHHHHHhcCCCCC-------CCCCCCchhHHHhhHHHHHHHH
Q psy18058 57 TFQKWVNSHLVR--------VSCRIGDLYVDLRDGKMLLKLLEVLSGERLP-------RPTKGKMRIHCLENVDKALQFL 121 (2301)
Q Consensus 57 ~f~~W~n~~l~~--------~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~-------~~~~~~~~~~~~~N~~~al~~~ 121 (2301)
.||+-+|+.|-. ....+-|+|..++||+.||+||.--.|+++. +.+++.+-+++++|.++++...
T Consensus 123 elt~~~~lllwc~~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~ 202 (612)
T COG5069 123 ELTKHINLLLWCDEDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIA 202 (612)
T ss_pred hHHhhhhhheeccccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchH
Confidence 688888887632 1234679999999999999999999998653 3345567789999999999999
Q ss_pred Hhcc-cccccCCcccccCCcchhhHHHHHHHHhhhhhcccccc-----------cccccccccHHHHHHHHHHhHhcCCC
Q psy18058 122 REQR-VHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIE-----------ETDNQETKSAKDALLLWCQMKTAGYH 189 (2301)
Q Consensus 122 ~~~~-~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~-----------~~~~~~~~~~~~~ll~W~~~~~~~~~ 189 (2301)
+-.| +.++||++.| + ...+|+ ++|.||++-.+..|.+. ......+.+++..+++|.+.....-.
T Consensus 203 rli~vedivnV~~pD--E-Rsimty-v~~y~~rf~~l~Kid~al~rv~rllE~~et~~qlrl~yE~~l~rll~~i~~~q~ 278 (612)
T COG5069 203 RLIGVEDIVNVSIPD--E-RSIMTY-VSWYIIRFGLLEKIDIALHRVYRLLEADETLIQLRLPYEIILLRLLNLIHLKQA 278 (612)
T ss_pred hhcCcceeeecCCcc--h-HHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 9988 7899999888 3 667777 99999987776655321 11123566889999999993221112
Q ss_pred CcccccCCCCccchhhHHHHHhhhCCCCccccccCccCHHHHHHHHHHHHHHhcCCccccccccccccCCChhhHHHHHH
Q psy18058 190 NVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVV 269 (2301)
Q Consensus 190 ~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~edv~~~~~de~si~~yv~ 269 (2301)
+-+|.||+.+.+||....-|+..+. .++.-..+...+....+......|+ .+.|.+.+.| .++| +.-+.+++
T Consensus 279 ~w~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl~gqi~~n~e-~y~~RKY~pP----AGnp--kldla~~~ 350 (612)
T COG5069 279 NWKVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSLAGQILQNAE-KYDCRKYLPP----AGNP--KLDLAFVA 350 (612)
T ss_pred ccchhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHHHHHHHHHHH-HhhhhccCCC----CCCc--ccchHHHH
Confidence 4569999999999999999999997 7787888877888899999999995 9999999999 6788 99999999
Q ss_pred HHHHHhhhcchhhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHh
Q psy18058 270 TYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFN 343 (2301)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~sl~~~~~~l~~f~ 343 (2301)
.+|+..+..++....++ .|++....+-+..+....-|+....-.-+-.++.+++..--..++.+.
T Consensus 351 ~lF~t~~~qe~l~~~~~---------~eI~e~d~e~efear~~Tf~l~~~~vsp~i~~l~gd~Rdql~~lq~l~ 415 (612)
T COG5069 351 HLFNTHPGQEPLEEEEK---------PEIEEFDAEGEFEARVFTFWLNSLDVSPEITNLFGDLRDQLILLQALS 415 (612)
T ss_pred hhcCCCcccchhhhhcc---------cccCCcchhhHHHHHHHHHHHHHhcCChhhhhhcccHHHHHHHHHHHH
Confidence 99988877654332222 223333334455666777788887766555667777765545555443
No 27
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.27 E-value=1.7e-11 Score=122.98 Aligned_cols=96 Identities=20% Similarity=0.302 Sum_probs=75.7
Q ss_pred eEeEecceeeeccCCcc-CCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccc-ccCCC------
Q psy18058 2157 MEGTLVRKHEWEAIAKR-ASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV-ADDYS------ 2228 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~-~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~-~~d~~------ 2228 (2301)
++|+|.++ ++|++ .+.++|+++||||+++.|+||+++... ...+.+.|+|.++.+.. ..+..
T Consensus 2 k~g~l~Kr----~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~------~~~~kG~I~L~~~~~ve~~~~~~~~~~~~ 71 (106)
T cd01238 2 LESILVKR----SQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK------RGSKKGSIDLSKIKCVETVKPEKNPPIPE 71 (106)
T ss_pred cceeeeee----ccCCCCCCCCCceeEEEEEcCCEEEEECCCccc------ccCcceeEECCcceEEEEecCCcCccccc
Confidence 68999998 44555 466799999999999999999987632 12466789999876543 23322
Q ss_pred CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2229 kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
+++++|.|.+++. .|+|+|+|++++.+||.+|+.
T Consensus 72 ~~~~~F~i~t~~r-~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 72 RFKYPFQVVHDEG-TLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred ccCccEEEEeCCC-eEEEEcCCHHHHHHHHHHHHh
Confidence 4689999999864 888999999999999999975
No 28
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.24 E-value=3.4e-11 Score=117.69 Aligned_cols=93 Identities=20% Similarity=0.288 Sum_probs=75.8
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEeCc------EEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCC
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGT------LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS 2228 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~------~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~ 2228 (2301)
|.++|||.+. ++|+++||||+++ .|.||++++.+... ...|.+.|+|.+|.......-.
T Consensus 2 v~k~GyL~K~------------K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~---~~~p~~vI~L~~c~~v~~~~d~ 66 (101)
T cd01257 2 VRKSGYLRKQ------------KSMHKRFFVLRAESSGGPARLEYYENEKKFLQK---GSAPKRVIPLESCFNINKRADA 66 (101)
T ss_pred ccEEEEEeEe------------cCcEeEEEEEecCCCCCCceEEEECChhhcccc---CCCceEEEEccceEEEeecccc
Confidence 6789999553 8999999999988 79999998843221 1257789999999876544225
Q ss_pred CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2229 kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
+++|+|.|.|++. .|+|.|+|+.++..|+.+|+.
T Consensus 67 k~~~~f~i~t~dr-~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 67 KHRHLIALYTRDE-YFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ccCeEEEEEeCCc-eEEEEeCCHHHHHHHHHHHhh
Confidence 6779999999985 999999999999999999964
No 29
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.24 E-value=3.6e-11 Score=125.59 Aligned_cols=93 Identities=22% Similarity=0.447 Sum_probs=78.9
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|||.++ ||. .++|+++||||.++.|+||++.... .+.+.|+|.++.+....+ .+++|+|.|
T Consensus 2 k~G~L~K~-----~~~---~~~WkkRwfvL~~~~L~yyk~~~~~--------~~~g~I~L~~~~v~~~~~-~~~~~~F~i 64 (125)
T cd01252 2 REGWLLKQ-----GGR---VKTWKRRWFILTDNCLYYFEYTTDK--------EPRGIIPLENVSIREVED-PSKPFCFEL 64 (125)
T ss_pred cEEEEEEe-----CCC---CCCeEeEEEEEECCEEEEEcCCCCC--------CceEEEECCCcEEEEccc-CCCCeeEEE
Confidence 78999876 444 4899999999999999999987621 466789999988777655 468899999
Q ss_pred EeCCC--------------------CEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2237 KADNG--------------------AEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2237 ~~~~g--------------------~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
.++++ ..|+|+|+|++++..||.+|+.++.
T Consensus 65 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 65 FSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred ECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 98776 6899999999999999999999876
No 30
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.23 E-value=3.8e-11 Score=117.88 Aligned_cols=90 Identities=24% Similarity=0.390 Sum_probs=73.8
Q ss_pred EeEecceeeeccCCccCCCCCCceEEEEEe--CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLR--GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~--~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
.|||.+. ||+.. .++|+++||||+ ++.|+||+++.. ..|.+.|+|.++.+....+ .++++|.
T Consensus 2 ~GyL~K~-----g~~~~-~K~WkkRWFvL~~~~~~L~Yyk~~~d--------~~p~G~I~L~~~~~~~~~~--~~~~~F~ 65 (95)
T cd01265 2 CGYLHKI-----EGKGP-LRGRRSRWFALDDRTCYLYYYKDSQD--------AKPLGRVDLSGAAFTYDPR--EEKGRFE 65 (95)
T ss_pred cccEEEe-----cCCCC-CcCceeEEEEEcCCCcEEEEECCCCc--------ccccceEECCccEEEcCCC--CCCCEEE
Confidence 5999887 54422 789999999998 468999998872 2577899999987766544 2479999
Q ss_pred EEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2236 l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|.|+ +..|+|+|+|+++|..||.+|+.+
T Consensus 66 i~t~-~r~y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 66 IHSN-NEVIALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EEcC-CcEEEEECCCHHHHHHHHHHHHhh
Confidence 9987 469999999999999999999875
No 31
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.23 E-value=4.4e-11 Score=119.26 Aligned_cols=94 Identities=17% Similarity=0.311 Sum_probs=71.8
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcc----cc--cccC-CCC
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGS----AQ--VADD-YSK 2229 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~----~~--~~~d-~~k 2229 (2301)
++|||.++ ||+. .++|+++||||+++.|+||+++... .|.+.|+|..+. +. .+.+ -.+
T Consensus 1 KeG~L~K~-----g~~~--~k~wkkRwFvL~~~~L~Yyk~~~d~--------~~~G~I~L~~~~~~~~v~~~~~~~~~~~ 65 (103)
T cd01251 1 KEGFMEKT-----GPKH--TEGFKKRWFTLDDRRLMYFKDPLDA--------FAKGEVFLGSQEDGYEVREGLPPGTQGN 65 (103)
T ss_pred CceeEEec-----CCCC--CCCceeEEEEEeCCEEEEECCCCCc--------CcCcEEEeeccccceeEeccCCcccccc
Confidence 58999887 5542 4789999999999999999987732 355677776432 21 1222 123
Q ss_pred CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2230 r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
+.+.|.|.|+ ++.|+|+|+|+++|..||.+|+.++.
T Consensus 66 ~~~~F~i~t~-~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 66 HWYGVTLVTP-ERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred ccceEEEEeC-CeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 3469999998 66999999999999999999999876
No 32
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.20 E-value=8.1e-11 Score=113.96 Aligned_cols=90 Identities=13% Similarity=0.283 Sum_probs=74.0
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|||.+. |+. .++|+++||||+++.|+||+++... ...+.+.|+|.+|.+... + .+++.|.|
T Consensus 1 ~~G~L~K~-----~~~---~k~Wk~RwFvL~~g~L~Yyk~~~~~------~~~~~G~I~L~~~~i~~~-~--~~~~~F~i 63 (91)
T cd01247 1 TNGVLSKW-----TNY---INGWQDRYFVLKEGNLSYYKSEAEK------SHGCRGSIFLKKAIIAAH-E--FDENRFDI 63 (91)
T ss_pred CceEEEEe-----ccc---cCCCceEEEEEECCEEEEEecCccC------cCCCcEEEECcccEEEcC-C--CCCCEEEE
Confidence 36999887 433 5899999999999999999997732 114567999999876643 2 34799999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
.+.++..|+|.|.|+.++..||.+|+.
T Consensus 64 ~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 64 SVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 988889999999999999999999974
No 33
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.20 E-value=5.8e-11 Score=116.32 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=75.4
Q ss_pred eEeEecceeeeccCCcc-----CCCCCCceEEEEEe-CcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc-CCCC
Q psy18058 2157 MEGTLVRKHEWEAIAKR-----ASNRSWDKIFVSLR-GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD-DYSK 2229 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~-----~~~r~W~~~~~vL~-~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~-d~~k 2229 (2301)
+.|||.++ ++|+. -+.++|+++||||+ ++.|+||+|.... ..|.+.|+|..|...... +.+.
T Consensus 1 ~~g~l~~~----~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~-------~~p~G~IdL~~~~~V~~~~~~~~ 69 (104)
T cd01236 1 YCGWLLVA----PDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPT-------TLPQGTIDMNQCTDVVDAEARTG 69 (104)
T ss_pred CcceeEEc----CCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCC-------cccceEEEccceEEEeecccccC
Confidence 46999888 56654 25889999999998 6888888876411 145678999877766644 5566
Q ss_pred CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2230 r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
++|.|.|.|++ +.|+|.|++++|++.||.+|+.
T Consensus 70 ~~~~f~I~tp~-R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 70 QKFSICILTPD-KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CccEEEEECCC-ceEEEEeCCHHHHHHHHHHHHh
Confidence 78999999996 5999999999999999999974
No 34
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.20 E-value=9.1e-12 Score=126.57 Aligned_cols=97 Identities=25% Similarity=0.364 Sum_probs=82.9
Q ss_pred HHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccC----ccCHHHHHHHHHHHHHHhcCCcccc
Q psy18058 174 KDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS----KSNAIYNLNNAFTVAEDKLGLTKLL 249 (2301)
Q Consensus 174 ~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~----~~~~~~n~~~a~~~a~~~lgi~~~l 249 (2301)
++.++.|||..+..|.++.|+||+++|+||.+||+|++.+.|+.+++.... .....+|++.+++.+++.++++.++
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~g~~~~~~ 81 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKLGGKLVLF 81 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHcCCeeecc
Confidence 578999999999998778999999999999999999999999999877654 2357899999999998664348999
Q ss_pred ccccccccCCChhhHHHHHHH
Q psy18058 250 DAEDIFVEQPDEKSIITYVVT 270 (2301)
Q Consensus 250 ~~edv~~~~~de~si~~yv~~ 270 (2301)
+|+||..++++..+++.|+..
T Consensus 82 ~~~Dl~~~~k~~~~v~~~l~~ 102 (103)
T smart00033 82 EPEDLVEGNKLILGVIWTLIL 102 (103)
T ss_pred CHHHHhhcchHHHHHHHHHHh
Confidence 999999766777777777654
No 35
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.19 E-value=6.6e-11 Score=117.90 Aligned_cols=93 Identities=22% Similarity=0.433 Sum_probs=76.2
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|||.+| +++. .++|+++||||.++.|+||++.... ...+...|+|.++.+....+..+++++|.|
T Consensus 1 k~G~L~kk-----~~~~--~~~W~kr~~~L~~~~l~~y~~~~~~------~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i 67 (94)
T cd01250 1 KQGYLYKR-----SSKS--NKEWKKRWFVLKNGQLTYHHRLKDY------DNAHVKEIDLRRCTVRHNGKQPDRRFCFEV 67 (94)
T ss_pred CcceEEEE-----CCCc--CCCceEEEEEEeCCeEEEEcCCccc------ccccceEEeccceEEecCccccCCceEEEE
Confidence 58999887 2221 5889999999999999999998732 113446789988888777765558899999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
.+++ ..|+|+|+|++++..||.+|+.
T Consensus 68 ~~~~-~~~~f~a~s~~~~~~Wi~al~~ 93 (94)
T cd01250 68 ISPT-KTWHFQADSEEERDDWISAIQE 93 (94)
T ss_pred EcCC-cEEEEECCCHHHHHHHHHHHhc
Confidence 9998 7999999999999999999975
No 36
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.16 E-value=1.1e-10 Score=115.63 Aligned_cols=91 Identities=24% Similarity=0.430 Sum_probs=75.0
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|||.++ +++ .++|+++||||.++.|+||+++.... ..+.+.|+|.++.+... .+++|+|.|
T Consensus 1 ~~G~L~k~-----~~~---~~~W~~r~~vl~~~~L~~~~~~~~~~------~~~~~~i~l~~~~~~~~---~~~~~~F~i 63 (91)
T cd01246 1 VEGWLLKW-----TNY---LKGWQKRWFVLDNGLLSYYKNKSSMR------GKPRGTILLSGAVISED---DSDDKCFTI 63 (91)
T ss_pred CeEEEEEe-----ccc---CCCceeeEEEEECCEEEEEecCccCC------CCceEEEEeceEEEEEC---CCCCcEEEE
Confidence 58999887 333 48999999999999999999987321 23556888988876553 235899999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.+++|..|+|+|+|.+++..||.+|+.|
T Consensus 64 ~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 64 DTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999764
No 37
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.11 E-value=3.9e-10 Score=114.95 Aligned_cols=98 Identities=29% Similarity=0.544 Sum_probs=84.4
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC-----CC
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY-----SK 2229 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~-----~k 2229 (2301)
+.++|||.++. ...++|+++||||.++.|++|++... .....+...|+|.++.+....+. .+
T Consensus 1 ~~~~G~L~~~~--------~~~~~wk~r~~vL~~~~L~~~~~~~~-----~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~ 67 (104)
T PF00169_consen 1 CIKEGWLLKKS--------SSRKKWKKRYFVLRDSYLLYYKSSKD-----KSDSKPKGSIPLDDCTVRPDPSSDFLSNKK 67 (104)
T ss_dssp EEEEEEEEEEE--------SSSSSEEEEEEEEETTEEEEESSTTT-----TTESSESEEEEGTTEEEEEETSSTSTSTSS
T ss_pred CEEEEEEEEEC--------CCCCCeEEEEEEEECCEEEEEecCcc-----ccceeeeEEEEecCceEEEcCccccccccC
Confidence 45899999985 33589999999999999999999873 11335677999999988887776 47
Q ss_pred CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2230 r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
++|+|.|.++++..|+|.|+|++++..|+.+|+.++
T Consensus 68 ~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 68 RKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp SSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999876
No 38
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.10 E-value=2.6e-10 Score=110.88 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=68.0
Q ss_pred CCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC--CCCCceEEEEeCCCCEEEEc
Q psy18058 2170 IAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY--SKKKHVFRVKADNGAEYLFQ 2247 (2301)
Q Consensus 2170 ~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~--~kr~~vf~l~~~~g~~~lfq 2247 (2301)
+|++.+ ++|+++||+|++..|+||+++.. .+.+.|+|..+.+....+. .+++|+|+|.++++ .|+|+
T Consensus 13 ~~~~~~-~n~KkRwF~Lt~~~L~Y~k~~~~---------~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r-~~yi~ 81 (98)
T cd01244 13 LAWKKV-LHFKKRYFQLTTTHLSWAKDVQC---------KKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDD-TMQLQ 81 (98)
T ss_pred CCCccC-cCCceeEEEECCCEEEEECCCCC---------ceeeeEEccceEEEEEcCCcccCCCceEEEEeCCC-eEEEE
Confidence 444445 89999999999999999997651 4667899998887764322 34579999999975 99999
Q ss_pred cCCHHHHHHHHHHHHH
Q psy18058 2248 AKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2248 a~~~~~~~~W~~~i~~ 2263 (2301)
|+|+.++.+||.+|+.
T Consensus 82 a~s~~E~~~Wi~al~k 97 (98)
T cd01244 82 FEAPVEATDWLNALEK 97 (98)
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999999975
No 39
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.06 E-value=4.4e-10 Score=113.76 Aligned_cols=93 Identities=23% Similarity=0.324 Sum_probs=71.3
Q ss_pred EeEecceeeeccCCcc-CCCCCCceEEEEEeCcE-------EEEEecCCCCCCCCCccCCCCcceeccCcccccc-----
Q psy18058 2158 EGTLVRKHEWEAIAKR-ASNRSWDKIFVSLRGTL-------LYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA----- 2224 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~-~~~r~W~~~~~vL~~~~-------L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~----- 2224 (2301)
+|||.++ |++. ...++|+++||||+++. |+||++... ..|.+.|+|..+.....
T Consensus 2 eGwL~K~-----~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~--------~k~~g~I~L~~~~~v~~~~~~~ 68 (108)
T cd01266 2 EGWLKKS-----PPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRK--------FKLEFVIDLESCSQVDPGLLCT 68 (108)
T ss_pred ceeeeeC-----CccccccccCcEEEEEEEeccccCCCcceEEEECCCCC--------CccceEEECCccEEEccccccc
Confidence 7999887 4433 25689999999999876 599998762 25677999998665422
Q ss_pred cCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2225 DDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2225 ~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
....++.++|.+.+++ +.|+|.|+|+++|..||.+|+..
T Consensus 69 ~~~~~~~~~f~i~t~~-r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 69 AGNCIFGYGFDIETIV-RDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred ccCcccceEEEEEeCC-ccEEEEECCHHHHHHHHHHHHhh
Confidence 1112456789999874 59999999999999999999764
No 40
>KOG3631|consensus
Probab=99.03 E-value=4.3e-10 Score=120.88 Aligned_cols=119 Identities=21% Similarity=0.382 Sum_probs=108.8
Q ss_pred CCCchhhhHhhhhhhhHHHHHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCC---CCCCchh
Q psy18058 32 NSSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP---TKGKMRI 108 (2301)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~---~~~~~~~ 108 (2301)
..|+.||..+..| -.+-|++..++||.||.+.|..|++|-+.|.||+.|.-|+-.|.|--+|-. -.|.+.-
T Consensus 242 DaFDtLFd~aPdK------ln~VK~sli~FvNkhLnklnLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~e 315 (365)
T KOG3631|consen 242 DAFDTLFDHAPDK------LNVVKKSLITFVNKHLNKLNLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFE 315 (365)
T ss_pred hhHHHHHhhCcHH------HHHHHHHHHHHHHHHhhhccceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHH
Confidence 3688999888877 789999999999999999999999999999999999999999999888744 3466677
Q ss_pred HHHhhHHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHhhhh
Q psy18058 109 HCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQ 156 (2301)
Q Consensus 109 ~~~~N~~~al~~~~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~ 156 (2301)
+++.||+.|++.|++-|..-....|+|||+|+.|.||.+++.++-+|.
T Consensus 316 ekv~NVsfAfeLm~D~GL~kp~~rpeDIvN~D~KSTLRvLy~LFtKyk 363 (365)
T KOG3631|consen 316 EKVHNVSFAFELMKDGGLEKPKVRPEDIVNKDLKSTLRVLYNLFTKYK 363 (365)
T ss_pred HHHHHHHHHHHHHHccCcCCCCCChHHhhcccHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999997763
No 41
>smart00150 SPEC Spectrin repeats.
Probab=99.03 E-value=2.1e-09 Score=108.88 Aligned_cols=100 Identities=28% Similarity=0.490 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q psy18058 1918 KFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVG 1997 (2301)
Q Consensus 1918 ~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~s~eI~~~l~~ 1997 (2301)
+|...+.+++.||.++...+.+.+.|.|+++++.++++|+.|+.+|..+.+.|..+...|+.|+..+|+++..|..++..
T Consensus 2 ~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~~ 81 (101)
T smart00150 2 QFLRDADELEAWLSEKEALLASEDLGKDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEEGHPDAEEIEERLEE 81 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 69999999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy18058 1998 LSNQRNALLHRWEERWENLQ 2017 (2301)
Q Consensus 1998 L~~~~~~l~~~w~~r~~~L~ 2017 (2301)
|..+|..|...+..|...|+
T Consensus 82 l~~~w~~l~~~~~~r~~~L~ 101 (101)
T smart00150 82 LNERWEELKELAEERRQKLE 101 (101)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988763
No 42
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.02 E-value=9.2e-10 Score=110.86 Aligned_cols=97 Identities=16% Similarity=0.314 Sum_probs=75.4
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccc----cCCCCCC
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA----DDYSKKK 2231 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~----~d~~kr~ 2231 (2301)
.-.|||...+.. | +.++|+++||||+|+.|+||+.+.... ...|.+.|+|.+|..... .|-..|+
T Consensus 2 ~~~GfL~~~q~~--~----~~k~W~RRWFvL~g~~L~y~k~p~d~~-----~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp 70 (122)
T cd01263 2 EYHGFLTMFEDT--S----GFGAWHRRWCALEGGEIKYWKYPDDEK-----RKGPTGLIDLSTCTSSEGASAVRDICARP 70 (122)
T ss_pred ccceeEEEEecc--C----CCCCceEEEEEEeCCEEEEEcCCCccc-----cCCceEEEEhhhCcccccccCChhhcCCC
Confidence 457999887643 3 358999999999999999999776311 125778999999887654 2567899
Q ss_pred ceEEEEeCC----------------CC---EEEEccCCHHHHHHHHHHHHH
Q psy18058 2232 HVFRVKADN----------------GA---EYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2232 ~vf~l~~~~----------------g~---~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
|.|.|++.- +. -|+|+|++.+++..|+.+|+.
T Consensus 71 ~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~ 121 (122)
T cd01263 71 NTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS 121 (122)
T ss_pred CeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence 999997531 22 289999999999999999986
No 43
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.00 E-value=1.7e-09 Score=109.05 Aligned_cols=91 Identities=21% Similarity=0.340 Sum_probs=70.5
Q ss_pred EeEecceeeeccCCccCCCCCCceEEEEEe--CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccc-------cCCC
Q psy18058 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLR--GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA-------DDYS 2228 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~--~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~-------~d~~ 2228 (2301)
+|||.++ |+. .++|+++||||. ++.|+||++... ..|.+.|+|..+.+... +...
T Consensus 2 ~G~L~K~-----g~~---~k~WkkRwFvL~~~~~~L~Yy~~~~~--------~~~~g~I~L~~~~~v~~~~~~~~~~~~~ 65 (101)
T cd01235 2 EGYLYKR-----GAL---LKGWKPRWFVLDPDKHQLRYYDDFED--------TAEKGCIDLAEVKSVNLAQPGMGAPKHT 65 (101)
T ss_pred eEEEEEc-----CCC---CCCccceEEEEECCCCEEEEecCCCC--------CccceEEEcceeEEEeecCCCCCCCCCC
Confidence 7999888 443 699999999999 459999998862 24556888887543321 2223
Q ss_pred CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2229 kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
.+.++|.+.++ +..|+|.|++++++..||.+|+.+|
T Consensus 66 ~~~~~f~i~t~-~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 66 SRKGFFDLKTS-KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CCceEEEEEeC-CceEEEECCCHHHHHHHHHHHHhhC
Confidence 46688998775 5799999999999999999998865
No 44
>smart00150 SPEC Spectrin repeats.
Probab=98.97 E-value=5.5e-09 Score=105.83 Aligned_cols=100 Identities=37% Similarity=0.691 Sum_probs=96.2
Q ss_pred HHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCChhhHHHHHHH
Q psy18058 642 QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQD 721 (2301)
Q Consensus 642 qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~ 721 (2301)
+|..++.++..||.+++..+.+.++|.|+..++.++++|+.|+.+|..+++.+..+...|+.|+..++++++.|..++..
T Consensus 2 ~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~~ 81 (101)
T smart00150 2 QFLRDADELEAWLSEKEALLASEDLGKDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEEGHPDAEEIEERLEE 81 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 58899999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy18058 722 TMAMWQNLLDLAAFRRKRLE 741 (2301)
Q Consensus 722 l~~~w~~L~~~~~~R~~~Le 741 (2301)
|..+|+.|...+..|...|+
T Consensus 82 l~~~w~~l~~~~~~r~~~L~ 101 (101)
T smart00150 82 LNERWEELKELAEERRQKLE 101 (101)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998873
No 45
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=98.95 E-value=1.1e-08 Score=104.35 Aligned_cols=104 Identities=26% Similarity=0.426 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCchHHHHH
Q psy18058 1915 DLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEK 1994 (2301)
Q Consensus 1915 ~~~~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~s~eI~~~ 1994 (2301)
+++.|...+.++..||.++...+.+.+.|.|+..++.++.+|+.|..+|..+.+.++.+...|+.|+..+|+.+..|..+
T Consensus 2 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~~ 81 (105)
T PF00435_consen 2 QLQQFQQEADELLDWLQETEAKLSSSEPGSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQEK 81 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCTHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 47889999999999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1995 LVGLSNQRNALLHRWEERWENLQL 2018 (2301)
Q Consensus 1995 l~~L~~~~~~l~~~w~~r~~~L~~ 2018 (2301)
+..|..+|..|...+..|...|++
T Consensus 82 ~~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 82 LEELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999998874
No 46
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.94 E-value=4.3e-09 Score=104.98 Aligned_cols=97 Identities=18% Similarity=0.331 Sum_probs=66.0
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEe-CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCce
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLR-GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHV 2233 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~-~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~v 2233 (2301)
|.++|||.++ |+ ..++|+++||||+ ++.|++|+++..... . ...+...+.+.+|.+... + ..++|.
T Consensus 1 v~k~G~L~K~-----g~---~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~-~--~~i~l~~~~v~~~~~~~~-~-~~~~~~ 67 (102)
T cd01241 1 VVKEGWLHKR-----GE---YIKTWRPRYFLLKSDGSFIGYKEKPEDGD-P--FLPPLNNFSVAECQLMKT-E-RPRPNT 67 (102)
T ss_pred CcEEEEEEee-----cC---CCCCCeeEEEEEeCCCeEEEEecCCCccC-c--cccccCCeEEeeeeeeec-c-CCCcce
Confidence 4589999887 44 3699999999999 788999988762211 1 112233445545444332 2 357799
Q ss_pred EEEEeCC-C--CEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2234 FRVKADN-G--AEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2234 f~l~~~~-g--~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|.|+..+ + .+-.|.|+|+++|.+||.+|+.+
T Consensus 68 F~i~~~~~~~~~~r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 68 FIIRCLQWTTVIERTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred EEEEeccCCcccCEEEEeCCHHHHHHHHHHHHhh
Confidence 9998332 1 12256799999999999999875
No 47
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.93 E-value=2.8e-09 Score=103.02 Aligned_cols=90 Identities=17% Similarity=0.298 Sum_probs=71.7
Q ss_pred EeEecceeeeccCCccCCCCCCceEEEEEeC----cEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC-CCCCc
Q psy18058 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLRG----TLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY-SKKKH 2232 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~----~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~-~kr~~ 2232 (2301)
.|||.++ ||+. .++|+++||+|.+ +.|+||++.... .|.+.|+|..+.+....|+ .+|+|
T Consensus 2 ~G~l~K~-----g~~~--~K~wK~rwF~l~~~~s~~~l~yf~~~~~~--------~p~gli~l~~~~V~~v~ds~~~r~~ 66 (98)
T cd01245 2 KGNLLKR-----TKSV--TKLWKTLYFALILDGSRSHESLLSSPKKT--------KPIGLIDLSDAYLYPVHDSLFGRPN 66 (98)
T ss_pred CCccccC-----CCCc--ccccceeEEEEecCCCCceEEEEcCCCCC--------CccceeeccccEEEEccccccCCCe
Confidence 4777655 4422 6899999999998 999999998832 4556888998865554454 47899
Q ss_pred eEEEEeCCC-CEEEEccCCHHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNG-AEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2233 vf~l~~~~g-~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
+|.|.++++ ..|++.|++ ++++.||.+|+.
T Consensus 67 cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 67 CFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred EEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 999998877 788888888 999999999974
No 48
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=98.90 E-value=2e-08 Score=102.49 Aligned_cols=103 Identities=29% Similarity=0.507 Sum_probs=98.7
Q ss_pred HHHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCChhhHHHHH
Q psy18058 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRL 719 (2301)
Q Consensus 640 l~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l 719 (2301)
+.+|..+++++..||.+++..+...++|.|+..+..++.+|+.|..+|..+++.+..|...|..|+..+|++++.|+.++
T Consensus 3 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~~~ 82 (105)
T PF00435_consen 3 LQQFQQEADELLDWLQETEAKLSSSEPGSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQEKL 82 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCTHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 45899999999999999999998777899999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 720 QDTMAMWQNLLDLAAFRRKRLEE 742 (2301)
Q Consensus 720 ~~l~~~w~~L~~~~~~R~~~Le~ 742 (2301)
..|+.+|+.|...+..|...|++
T Consensus 83 ~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 83 EELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999974
No 49
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.81 E-value=1.7e-08 Score=97.00 Aligned_cols=86 Identities=17% Similarity=0.373 Sum_probs=67.8
Q ss_pred ccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC--CCCCceEEEEeCC--C-CEEEE
Q psy18058 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY--SKKKHVFRVKADN--G-AEYLF 2246 (2301)
Q Consensus 2172 k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~--~kr~~vf~l~~~~--g-~~~lf 2246 (2301)
|+...++|+++||+|+|+.|+|||++... .+++.+.|..+.|++.+|- .++++.|++.++. | ++|.|
T Consensus 13 ~~~~~K~~KrrwF~lk~~~L~YyK~kee~--------~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l 84 (106)
T cd01237 13 KKLTLKGYKQYWFTFRDTSISYYKSKEDS--------NGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWL 84 (106)
T ss_pred chhhhhhheeEEEEEeCCEEEEEccchhc--------CCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEE
Confidence 45567899999999999999999987732 3556666666666666653 4667999988653 3 59999
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q psy18058 2247 QAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2247 qa~~~~~~~~W~~~i~~~~ 2265 (2301)
.|+|++++..||.++..|.
T Consensus 85 ~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 85 RCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred ECCCHHHHHHHHHHHHHhh
Confidence 9999999999999998763
No 50
>KOG0518|consensus
Probab=98.79 E-value=3.8e-11 Score=152.87 Aligned_cols=217 Identities=23% Similarity=0.194 Sum_probs=178.3
Q ss_pred hhHHHHHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCC-CCCchhHHHhhHHHHHHHHHhc
Q psy18058 46 LADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT-KGKMRIHCLENVDKALQFLREQ 124 (2301)
Q Consensus 46 ~~~~~~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~-~~~~~~~~~~N~~~al~~~~~~ 124 (2301)
..+||-.++-..+|.|+-.+....|..+-+|..|+.||++|..+++++++....+.. ++-. ++.++|++.|+++....
T Consensus 19 ~~ae~~i~~~~~~T~~~t~~~~~aG~~~~slk~~~~dg~~~p~~v~vl~~~~~skv~~~~p~-~q~~~~v~~a~~~ft~d 97 (1113)
T KOG0518|consen 19 IVAEVKIQDNLDGTVTVTYDPQRAGFYILSLKYDGSDGVNLPSLVQVLSAVDTSKVKKKGPG-IQGLHNVREALNKFTVD 97 (1113)
T ss_pred cceeeEEEecCCceEEEEEccccCcceeEEEEecCccccccceeeEEeeccccceeEEecCC-ccCcchhhhhhhhhhhc
Confidence 345666777788888888888889999999999999999999999999987655432 2223 89999999999999988
Q ss_pred ccccccCCcccccCCcchhhHHHHHHHHhhhhhcccccccccccccccHHHHHHHHHHhHh-----cCCCCcccccCCCC
Q psy18058 125 RVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMKT-----AGYHNVNVRNFTTS 199 (2301)
Q Consensus 125 ~~~l~~i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~~~~~~~~~~~~~~ll~W~~~~~-----~~~~~~~v~nf~~~ 199 (2301)
+..++||++.+|+|++.+++++++|+++.++ +..+. ..+..+++.=+.|++... ...|.+.+.||+++
T Consensus 98 ~r~~~nigs~hivd~v~~~~g~~~~~~v~~~-~dg~y------~~k~~p~e~~~h~~e~~~~e~~~~~sP~~~~v~~~td 170 (1113)
T KOG0518|consen 98 NRKETNIGSAHIVDHVVKLIGSLTWTLVQDY-GDGIY------KTKRTPKEKGEHEVEVLYDEKPVPASPFVVKVNEGTD 170 (1113)
T ss_pred cceeeccCCcccccccccccccceeEeeecc-CCcce------eeecCchhccchhhhhhhcccccccCCceeccccccC
Confidence 8999999999999999999999999999888 32221 123445555566666422 12356889999999
Q ss_pred ccchhhHHHHHhhhCCCCc-cccccCccCHHHHHHHHHHHHHHhcCCcccccc----ccccccCCChhhHHHHHHH
Q psy18058 200 WRDGLAFNAIIHKHRPDLI-QFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDA----EDIFVEQPDEKSIITYVVT 270 (2301)
Q Consensus 200 ~~dg~~~~~li~~~~p~~~-~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~----edv~~~~~de~si~~yv~~ 270 (2301)
|+||.|+-+++..-+|+.. .|....+.....|+..|+.-+.+.+-.++.+.| -.+....||+.++++|...
T Consensus 171 ~n~~~Alg~~le~~~vg~p~~f~v~~~Ga~~gnl~~a~~gpse~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 171 WNDVQALGPGLESARVGKPNVFEVETPGAGQGNLEVAVEGPSEALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred cccceEeccchhhcccCCCceeEEecCCccccceeeeecChhhhcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 9999999999999999987 577778888899999999999888888888888 5667889999999999765
No 51
>KOG4240|consensus
Probab=98.78 E-value=8.8e-06 Score=106.94 Aligned_cols=444 Identities=14% Similarity=0.095 Sum_probs=280.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q psy18058 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDL---HRFL-RDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQ 1103 (2301)
Q Consensus 1028 ~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~---~~f~-~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~ 1103 (2301)
.....|+.-+..+...=......+..|...+...... ..++ .-+..+..|=... ..++..-.+.|...++..+.-
T Consensus 120 ~si~~iq~~~q~~~~~~~~r~~~ws~rk~~~~~~~a~~~~e~~l~evi~~l~~~~~~l-s~ia~~ft~~D~~~~~qvl~~ 198 (1025)
T KOG4240|consen 120 SSIAHIQLVLQQLDDENTQRESLWSPRKTSLHIFAASFPFEQPLFEVIRPLSSWNEDL-SDIAFDFTTEDYTKAEQVLQL 198 (1025)
T ss_pred cchHHHHHHHHHHhhhcchhhhhcccchhHHHHHHhhhhhccchHHHHhhHHHHhhhH-HHHhhhcCchhhhhhhhhhhh
Confidence 3344455555555555455555555555555543332 2222 2344455554443 223333234455556666666
Q ss_pred HHHHHHhHH--------hhHHHHHHHHH---hchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy18058 1104 HQAIREEID--------NYTEDYKKMMD---YGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSL 1172 (2301)
Q Consensus 1104 h~~l~~ei~--------~~~~~~~~l~~---~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l 1172 (2301)
|.+...-+. ..+.-.+.+.. .+..+.. ....+....+++-+..+..+-..+.-..+.+..++.+|.
T Consensus 199 ~~~k~l~v~~~~~~l~~~gg~llqyl~q~~~~~~r~a~---e~~~~mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~ 275 (1025)
T KOG4240|consen 199 HEDKLLLVDNLLFSLRPEGGGLLQYLRQVSWAGGRLAT---ESDRDMVEAVQGLLESLEEEVQRLELPADVRSTRLEQAS 275 (1025)
T ss_pred hhHhhhhhccchhhhccccccHHHHHHHHHHHHHHhcc---ccchHHHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHH
Confidence 654332222 22222333331 1222221 222356778999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhh-ccCCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHhhhccCCCchHHHH
Q psy18058 1173 NLQMFNRDAKQAEVLLSQQEHVL-SKDETPVNLEQVENLIKRHEAFLTTMEA-NDDKINGVVQFADRLNDEDHYAADKVK 1250 (2301)
Q Consensus 1173 ~lq~f~~~~~~~~~wL~~~E~~L-~~~~~~~~l~~~e~~l~k~~~f~~~l~~-~~~~v~~l~~~a~~L~~~~~~~~~~I~ 1250 (2301)
++.....+..++..|+.+....| ....++++......+..+|..|...... ...--..+...+.-+..+.|++...+.
T Consensus 276 ~l~~l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~~Lq~~~~~f~d~~e~k~~~~q~~~~~~a~~~~~~~h~~~~e~~ 355 (1025)
T KOG4240|consen 276 QLAKLLEDKNQVLALIRNGLSMLTQLRVLASDLSETSQLQREHRQFQDAQEVKTLLSQLQVQQKAFDLLQNKHQNRDESL 355 (1025)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhhhccCCCcCCccHHHHhhHhhhhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHH
Confidence 99999999999999999999888 5566677888888899999999888776 222334556677777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhc-------ccchhhhHhHHHHHHHHHHHH
Q psy18058 1251 KKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQ-------DETYRSAKTVHSKWTRHQAFE 1323 (2301)
Q Consensus 1251 ~~l~~l~~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~-------~~~~~d~~~l~~~l~khq~~~ 1323 (2301)
.++..++.+|..+...++.|.+.+..+.. |+.....+..-|++....-. ...-........++.+|
T Consensus 356 ~~le~~~t~~qql~~~~e~r~~~vaa~~~---~~~t~e~v~~iLe~le~e~E~~~g~al~~~~f~~l~a~~l~skh---- 428 (1025)
T KOG4240|consen 356 EKLETLQTKWQQLMTAMEDRLKLVAAAVA---FYKTSEQVEPILEDLESEYERSGGCALLGAQFRSLHAALLISKH---- 428 (1025)
T ss_pred HhHHHHhhhHHHHHHHHHHHHHHHHHHHH---HhcCHHHHHHHHHhcccccchhhhhhhchhHHHHHhhhhhhhhh----
Confidence 99999999999999999999999988876 56666665555543221110 00000011111222222
Q ss_pred HHHHHhHHHHHHHHHHHhHHHhhCCCchhhHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc
Q psy18058 1324 AEIASNKDRLLRVQQSGSELMKEKPELAELIGP------------KISDLGQQFDDLETTTKDKGERLFDSNREVLIHQT 1391 (2301)
Q Consensus 1324 ~El~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~------------~l~~L~~~W~~L~~~~~~r~~~L~~a~~~~~f~~~ 1391 (2301)
...++.+...|.......+-....|.. ....+..+=......+..+.+.+..+.....|..+
T Consensus 429 ------~~~~~~~l~~CTe~r~~ad~~~~ei~r~~i~~~~k~lk~~r~~~r~re~~~l~~~l~a~q~~d~cq~~~~~e~~ 502 (1025)
T KOG4240|consen 429 ------RLAKELFLKACTEARRNADVFLREIKRNRILDREKQLKLHRNLLRQRENCDLESWLLAKQALDKCQSYVVAEAS 502 (1025)
T ss_pred ------hhhhhhhhhhHHHHHhcCcHHHHHHHHHhhhhHHHHHHHHHHHHhccccCcHHHHHHHHhhhHhhhHHHHHHHH
Confidence 222333444444443333322222222 22222222122223344555666666666678889
Q ss_pred HHHHHHhHHHH-HHhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy18058 1392 CDDIDSWMNEL-EKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQR 1470 (2301)
Q Consensus 1392 ~~~l~~WL~~~-E~~L~~~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r 1470 (2301)
++++..||... |..+..... ......-.+.+.+..|+......+..+..+......|....+-....|+.-+......
T Consensus 503 ~ke~e~~L~~~~ef~~~~~~s-~~~~e~~e~~~~~~~~~~~~~~~~~~~~~f~~~~~~f~~~~~~h~~~Iq~~v~~~e~~ 581 (1025)
T KOG4240|consen 503 AKEAEEFLHTEGEFKLKELTS-KSERESIELLDLFAKFKSPFKQTKTMVSLFIQLQDNFTELAHRHGREIQKCVERVEKE 581 (1025)
T ss_pred HHHHHHHHHhCcchhhhhcch-hhhhhhccchhhhhhcCCcchhHHHHHHHHHHHhhhhhhhhhhhhhhHHhhcccchhc
Confidence 99999999887 444443223 4455555566777778888888888888888888999888877778899999999999
Q ss_pred HHHhHHHHHHHHHHHHHHH
Q psy18058 1471 FEKIKEPLLARQRALEKKK 1489 (2301)
Q Consensus 1471 ~~~L~~~~~~R~~~Le~s~ 1489 (2301)
|......+..|+.....+.
T Consensus 582 ~~~~~~~~~~~~~sk~~~~ 600 (1025)
T KOG4240|consen 582 YRSFSRRMGKRCGSKEKAL 600 (1025)
T ss_pred cCCCCcccchhhhhHHHHh
Confidence 9888888888877766543
No 52
>KOG0516|consensus
Probab=98.77 E-value=2.6e-06 Score=121.72 Aligned_cols=112 Identities=44% Similarity=0.627 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCC---C-CCCCchhHHHhhHHHHHHHHHhccc
Q psy18058 51 ESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPR---P-TKGKMRIHCLENVDKALQFLREQRV 126 (2301)
Q Consensus 51 ~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~---~-~~~~~~~~~~~N~~~al~~~~~~~~ 126 (2301)
..+|+++|+.|+|.++..+...|+++++||++ ...+.++++.++...+. + ..+.++++.++||..++.+++...+
T Consensus 72 ~~~~k~~f~~~~~~~l~~~~~~ve~~~~~l~~-~~~i~~l~~~e~~~~~~~~~~~~~~~~~~~~l~n~q~~l~~~k~~~~ 150 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKVMKHVEDLYEDLRD-LNSISLLEVEELLVAVRKQEPEQDRQERLHDLENVQAALTALKEDLA 150 (1047)
T ss_pred HHHHHhccchhhHHHHHHhccchhHHhhhhhh-hhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhHHHHHhhhccchHHHH
Confidence 57999999999999999999999999999996 55666666655544332 1 2456788999999999999999999
Q ss_pred cccc--CCcccccCCcchhhHHHHHHHHhhhhhcccccc
Q psy18058 127 HLEN--MGSHDIVDGNPRLSLGLIWTIILRFQIQDITIE 163 (2301)
Q Consensus 127 ~l~~--i~~~di~~g~~~~~Lgliw~ii~~~~~~~~~~~ 163 (2301)
.+++ |..++|.+|+++.+||++|.|+++||+..+..+
T Consensus 151 el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~~ll~~ 189 (1047)
T KOG0516|consen 151 ELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYVKLLAE 189 (1047)
T ss_pred HHHHhhcccchhhccchhhhhhhHHHHHHHHHHHHhhhh
Confidence 9999 999999999999999999999999999666433
No 53
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=98.71 E-value=9.5e-08 Score=96.63 Aligned_cols=98 Identities=34% Similarity=0.568 Sum_probs=80.5
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCC--CCCce
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS--KKKHV 2233 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~--kr~~v 2233 (2301)
.++|+|.++.. . +...|+++|++|.++.|+||++.... . ...+...|+|.++.+....+.. ..+++
T Consensus 2 ~~~G~l~~~~~-----~--~~~~~~~~~~~L~~~~l~~~~~~~~~--~---~~~~~~~i~l~~~~v~~~~~~~~~~~~~~ 69 (102)
T smart00233 2 IKEGWLYKKSG-----G--KKKSWKKRYFVLFNSTLLYYKSEKAK--K---DYKPKGSIDLSGITVREAPDPDSAKKPHC 69 (102)
T ss_pred ceeEEEEEeCC-----C--ccCCceEEEEEEECCEEEEEeCCCcc--c---cCCCceEEECCcCEEEeCCCCccCCCceE
Confidence 47999988721 1 45789999999999999999988731 1 1356778999999877766643 56899
Q ss_pred EEEEeCCCCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2234 FRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2234 f~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
|.|.+.++..|+|.|+|..++..|+.+|+.++
T Consensus 70 f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 70 FEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 99999988899999999999999999998865
No 54
>KOG4240|consensus
Probab=98.66 E-value=6.6e-06 Score=108.04 Aligned_cols=527 Identities=15% Similarity=0.114 Sum_probs=298.7
Q ss_pred HHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccccCcccCCCHHHHHHHH
Q psy18058 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLK 1528 (2301)
Q Consensus 1449 l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~qf~~d~~~~~~Wl~e~~~~a~s~~~g~~l~~vq~l~ 1528 (2301)
+...++++.+.+......+..+....-.....|..-+..++.++.|+..+ ..|+.+......+.-+.-+..+++.+.
T Consensus 4 ~~~ag~~~~e~~h~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~t~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (1025)
T KOG4240|consen 4 LAQAGECDPEPIHGAATDLEARIQDFVRRVEQRKLLLDMSVSFHTHYKEL---WTWLEELQKELLDPVCALSVPAVDKLI 80 (1025)
T ss_pred hhhcCCCCchhhhcccccccccccccccccccchhhhccchhhhhHHHHh---cchHHHHHHhhcchHHHhccchHHHHH
Confidence 34445577888888888888888888888888888888899888888766 778877554444433333333444444
Q ss_pred HHHHHHHHHHhcChhHHHHHHHhHhHhh--------h-cCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1529 KKNQSLAKEIDNHEPRINLICNNGRKLI--------D-EGH-EDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQ 1598 (2301)
Q Consensus 1529 ~k~q~l~~Ei~~~~~~i~~v~~~g~~Li--------~-~~~-~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~q 1598 (2301)
..++..... .....-....-|..++ . ..+ .+...|+.-+..+...=..-...+..|...+.....+.
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~si~~iq~~~q~~~~~~~~r~~~ws~rk~~~~~~~a~~ 157 (1025)
T KOG4240|consen 81 KRFQSQQDG---TLQAYVNTIPEGEDLIQQLRATSVNKTDYSSSIAHIQLVLQQLDDENTQRESLWSPRKTSLHIFAASF 157 (1025)
T ss_pred Hhhcccccc---ccccccccccchHhHHHHHHHHHhhccccccchHHHHHHHHHHhhhcchhhhhcccchhHHHHHHhhh
Confidence 333222222 1111111111111111 1 111 24566777777666666666666666777776655544
Q ss_pred HHHhchH----HHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHH-----------HHHHHHHHHHHHHHH-HHHhh
Q psy18058 1599 QYLFDAS----EAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLEL-----------AVEDYADTIRQLGET-ARQLT 1662 (2301)
Q Consensus 1599 qf~~~~~----e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~-----------el~~~~~~i~~L~~~-~~~L~ 1662 (2301)
-|...+- ++..|=..... ++..-...|...+...+.-|..-.. ...++-+.+.++... +..+.
T Consensus 158 ~~e~~l~evi~~l~~~~~~ls~-ia~~ft~~D~~~~~qvl~~~~~k~l~v~~~~~~l~~~gg~llqyl~q~~~~~~r~a~ 236 (1025)
T KOG4240|consen 158 PFEQPLFEVIRPLSSWNEDLSD-IAFDFTTEDYTKAEQVLQLHEDKLLLVDNLLFSLRPEGGGLLQYLRQVSWAGGRLAT 236 (1025)
T ss_pred hhccchHHHHhhHHHHhhhHHH-HhhhcCchhhhhhhhhhhhhhHhhhhhccchhhhccccccHHHHHHHHHHHHHHhcc
Confidence 4444333 33444322221 1111112222333333333322221 111122222221111 22223
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-cccCCCChHHHHHHHH
Q psy18058 1663 SEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAG-SHELGQDYDHVTLLWE 1741 (2301)
Q Consensus 1663 ~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~qf~~e~~~l~~Wi~~~e~~~~-s~~~g~d~e~v~~l~~ 1741 (2301)
....+..+.|...+..+...-..+...+..+..++..+..+..+..+..++..||.+...++. +-.++.|+.....+..
T Consensus 237 e~~~~mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~~l~~l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~~Lq~ 316 (1025)
T KOG4240|consen 237 ESDRDMVEAVQGLLESLEEEVQRLELPADVRSTRLEQASQLAKLLEDKNQVLALIRNGLSMLTQLRVLASDLSETSQLQR 316 (1025)
T ss_pred ccchHHHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhccCCCcCCccHHHHh
Confidence 334455667888888888888888889999999999999999999999999999999887654 4556888988999999
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHH
Q psy18058 1742 RFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDIL 1821 (2301)
Q Consensus 1742 k~~~f~~e~~~~~~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l 1821 (2301)
.|..|.+..+...-..-..+...+..+..+.|.+...+..++..++..|..|.-.++.|.++++++..++.-...+.-++
T Consensus 317 ~~~~f~d~~e~k~~~~q~~~~~~a~~~~~~~h~~~~e~~~~le~~~t~~qql~~~~e~r~~~vaa~~~~~~t~e~v~~iL 396 (1025)
T KOG4240|consen 317 EHRQFQDAQEVKTLLSQLQVQQKAFDLLQNKHQNRDESLEKLETLQTKWQQLMTAMEDRLKLVAAAVAFYKTSEQVEPIL 396 (1025)
T ss_pred hHhhhhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999988754111122234456677788999999999999999999999999999999999999997776666555555
Q ss_pred HhHHHHhhhCccccCCCcc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----------CcHH
Q psy18058 1822 GRISEKHHAMSDELGRDAG-------SVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAG-----------EKAK 1883 (2301)
Q Consensus 1822 ~wi~ek~~~l~~~~g~d~~-------~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~-----------~~a~ 1883 (2301)
.-+...... + .|.++. .+.-++.+|.. .+..+...+.......+. ....
T Consensus 397 e~le~e~E~-~--~g~al~~~~f~~l~a~~l~skh~~----------~~~~~l~~CTe~r~~ad~~~~ei~r~~i~~~~k 463 (1025)
T KOG4240|consen 397 EDLESEYER-S--GGCALLGAQFRSLHAALLISKHRL----------AKELFLKACTEARRNADVFLREIKRNRILDREK 463 (1025)
T ss_pred Hhcccccch-h--hhhhhchhHHHHHhhhhhhhhhhh----------hhhhhhhhHHHHHhcCcHHHHHHHHHhhhhHHH
Confidence 444332222 1 122111 12222333322 122222222222211110 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHHHHHH
Q psy18058 1884 EITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEI 1963 (2301)
Q Consensus 1884 ~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~~~~~ei 1963 (2301)
.+......+..+=......+..+...++.+..+--|+..+.+.+.||...-..........-+...-.+...+..|+...
T Consensus 464 ~lk~~r~~~r~re~~~l~~~l~a~q~~d~cq~~~~~e~~~ke~e~~L~~~~ef~~~~~~s~~~~e~~e~~~~~~~~~~~~ 543 (1025)
T KOG4240|consen 464 QLKLHRNLLRQRENCDLESWLLAKQALDKCQSYVVAEASAKEAEEFLHTEGEFKLKELTSKSERESIELLDLFAKFKSPF 543 (1025)
T ss_pred HHHHHHHHHhccccCcHHHHHHHHhhhHhhhHHHHHHHHHHHHHHHHHhCcchhhhhcchhhhhhhccchhhhhhcCCcc
Confidence 11111111111111111222235555666666667888899999999887654332222222222223344455555555
Q ss_pred HhhhhhHHHHHHHHHHHHhcCCCCchHHHHHH
Q psy18058 1964 DTREDNFTACISLGKELLSRNHYASNEIKEKL 1995 (2301)
Q Consensus 1964 ~~~~~~~~~~~~~g~~L~~~~~~~s~eI~~~l 1995 (2301)
......+..+.+....+....|.++.+|+..+
T Consensus 544 ~~~~~~~~~f~~~~~~f~~~~~~h~~~Iq~~v 575 (1025)
T KOG4240|consen 544 KQTKTMVSLFIQLQDNFTELAHRHGREIQKCV 575 (1025)
T ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhHHhhc
Confidence 55566666666666666666665555555433
No 55
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.66 E-value=7.8e-09 Score=96.87 Aligned_cols=75 Identities=29% Similarity=0.555 Sum_probs=64.2
Q ss_pred HHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccC------ccCHHHHHHHHHHHHHHhcCCc-cccccc
Q psy18058 180 WCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS------KSNAIYNLNNAFTVAEDKLGLT-KLLDAE 252 (2301)
Q Consensus 180 W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~------~~~~~~n~~~a~~~a~~~lgi~-~~l~~e 252 (2301)
|++..+..| ++.|.||+.||+||.++|+|||.|.|++|+++.+. -.+...|+....+.+.++||.. ..++||
T Consensus 1 ~~~~~~~~~-~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~e 79 (85)
T PF11971_consen 1 WVNARCAPY-FPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPE 79 (85)
T ss_pred CCCcccCCC-CcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHH
Confidence 666666665 88999999999999999999999999999997774 3367899999999999999774 466999
Q ss_pred ccc
Q psy18058 253 DIF 255 (2301)
Q Consensus 253 dv~ 255 (2301)
|+.
T Consensus 80 dl~ 82 (85)
T PF11971_consen 80 DLL 82 (85)
T ss_pred HHh
Confidence 985
No 56
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.59 E-value=2.2e-07 Score=92.55 Aligned_cols=98 Identities=19% Similarity=0.321 Sum_probs=76.5
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
.+||+|.+- +++ .++|+.+|+.|-++.|.||+.... ..+..+..-..|+|.++.+....+ ...+|.|.
T Consensus 3 ikeG~L~K~-----~~~---~~~~k~RyffLFnd~Ll~~~~~~~---~~~~~y~~~~~i~l~~~~v~~~~~-~~~~~~F~ 70 (101)
T cd01219 3 LKEGSVLKI-----SST---TEKTEERYLFLFNDLLLYCVPRKM---IGGSKFKVRARIDVSGMQVCEGDN-LERPHSFL 70 (101)
T ss_pred ccceEEEEE-----ecC---CCCceeEEEEEeCCEEEEEEcccc---cCCCcEEEEEEEecccEEEEeCCC-CCcCceEE
Confidence 479999765 322 478999999999999999986542 112234445578999987765433 45789999
Q ss_pred EEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2236 l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
|++.+ +.|.++|+|++++..||.+|+.+|.
T Consensus 71 I~~~~-rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 71 VSGKQ-RCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EecCC-cEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 99887 7999999999999999999999875
No 57
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.57 E-value=2.2e-07 Score=92.76 Aligned_cols=95 Identities=33% Similarity=0.633 Sum_probs=77.5
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
++|+|.++.. .. .++|+++|++|.++.|.+|+...... ...+...|+|.++.+....+..+++++|.|
T Consensus 1 ~~G~l~~~~~-----~~--~~~w~~~~~~L~~~~l~~~~~~~~~~-----~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i 68 (96)
T cd00821 1 KEGYLLKKTG-----KL--RKGWKRRWFVLFNDLLLYYKKKSSKK-----SYKPKGSIPLSGAEVEESPDDSGRKNCFEI 68 (96)
T ss_pred CcchhhhhhC-----hh--hCCccEEEEEEECCEEEEEECCCCCc-----CCCCcceEEcCCCEEEECCCcCCCCcEEEE
Confidence 4688877721 11 47899999999999999999876211 235677899999888777766667899999
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
.+.++..|+|.|+|..++..|+.+|+.
T Consensus 69 ~~~~~~~~~~~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 69 RTPDGRSYLLQAESEEEREEWIEALQS 95 (96)
T ss_pred ecCCCcEEEEEeCCHHHHHHHHHHHhc
Confidence 999889999999999999999999975
No 58
>KOG0930|consensus
Probab=98.56 E-value=2.2e-07 Score=101.09 Aligned_cols=96 Identities=20% Similarity=0.416 Sum_probs=72.7
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
..||||.+- +||+ ..+|+++||+|+.++||||.--... .|-+.|+|.+-.+-.-.| .+|||+|.
T Consensus 261 dREGWLlKl----gg~r---vktWKrRWFiLtdNCLYYFe~tTDK--------EPrGIIpLeNlsir~Ved-P~kP~cfE 324 (395)
T KOG0930|consen 261 DREGWLLKL----GGNR---VKTWKRRWFILTDNCLYYFEYTTDK--------EPRGIIPLENLSIREVED-PKKPNCFE 324 (395)
T ss_pred cccceeeee----cCCc---ccchhheeEEeecceeeeeeeccCC--------CCCcceeccccceeeccC-CCCCCeEE
Confidence 579999664 3433 6999999999999999999644311 244567776655554444 78999999
Q ss_pred EEeC--------------CC-------CEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2236 VKAD--------------NG-------AEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2236 l~~~--------------~g-------~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
|-.+ || +.|-++|++.++|.+||.+|+.+|+.
T Consensus 325 ly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 325 LYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred EecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 7432 23 47999999999999999999998873
No 59
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.53 E-value=2.9e-07 Score=94.87 Aligned_cols=95 Identities=16% Similarity=0.372 Sum_probs=68.0
Q ss_pred eEeEecceeeeccCCccCCCC--------------CCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceecc-Cccc
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNR--------------SWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR-GGSA 2221 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r--------------~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~-~a~~ 2221 (2301)
+|||+.+| +||+.++.+ +|+++||||+++.|.||+++..+ .+.+.|.+. +..+
T Consensus 1 keG~i~kr----~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~--------~~~~vil~D~~f~v 68 (121)
T cd01254 1 KEGYIMKR----SGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSA--------QILDVILFDVDFKV 68 (121)
T ss_pred CCceEEeC----CCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCC--------ceeeEEEEcCCccE
Confidence 58999888 566665432 69999999999999999988732 122233332 1111
Q ss_pred cc-----------ccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2222 QV-----------ADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2222 ~~-----------~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.. -.+.+.++|-|.|.+++. .|.|.|+|+.++..|+.+|+.|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R-~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 69 NGGGKEDISLAVELKDITGLRHGLKITNSNR-SLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred EeCCcccccccccccccCCCceEEEEEcCCc-EEEEEeCCHHHHHHHHHHHHhC
Confidence 11 112345679999988864 8999999999999999999864
No 60
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=98.53 E-value=0.035 Score=80.95 Aligned_cols=107 Identities=18% Similarity=0.317 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHHHHHHHHHH
Q psy18058 1671 QIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF--MLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDR 1748 (2301)
Q Consensus 1671 ~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~--qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~~k~~~f~~ 1748 (2301)
............|..+..........+....... ++...+.++..|....- ...|-|...+..+..+...+..
T Consensus 711 ~~~e~~~e~~~~~~~~~~~~d~~i~~i~~~i~~~~~~~~~~~~~le~~~~~eL-----~~~GvD~~~I~~l~~~i~~L~~ 785 (1201)
T PF12128_consen 711 QLKELRNELKAQWQELEAELDEQIEQIKQEIAAAKQEAKEQLKELEQQYNQEL-----AGKGVDPERIQQLKQEIEQLEK 785 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCCHHHHHHHHHHHHHHHH
Confidence 3444455666777888777777777777776666 68888999999887433 2458899999999888888887
Q ss_pred HHhhhhchHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1749 DTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRT 1801 (2301)
Q Consensus 1749 e~~~~~~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~ 1801 (2301)
++..+.. ..+.|.+...-+...|...-.....+.
T Consensus 786 ~l~~ie~-------------------~r~~V~eY~~~~~~~~~~~~~~~~~~~ 819 (1201)
T PF12128_consen 786 ELKRIEE-------------------RRAEVIEYEDWLQEEWDKVDELREEKP 819 (1201)
T ss_pred HHHHHHH-------------------hHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 7744321 123455566666667766544433333
No 61
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=98.51 E-value=0.04 Score=80.46 Aligned_cols=52 Identities=12% Similarity=0.258 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHhH
Q psy18058 1247 DKVKKKADNINDRRNANKERAHQQMETLKDQLQL--HQFLQDCEELGEWVQEKK 1298 (2301)
Q Consensus 1247 ~~I~~~l~~l~~rw~~l~~~~~~r~~~L~~~~~l--q~f~~~~~el~~Wl~ek~ 1298 (2301)
....+.....+..|..+..........+.....- ..+.....++..|.....
T Consensus 710 ~~~~e~~~e~~~~~~~~~~~~d~~i~~i~~~i~~~~~~~~~~~~~le~~~~~eL 763 (1201)
T PF12128_consen 710 EQLKELRNELKAQWQELEAELDEQIEQIKQEIAAAKQEAKEQLKELEQQYNQEL 763 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556677788998888888888888887764 788889999999987544
No 62
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.45 E-value=0.058 Score=79.84 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy18058 1421 LMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKE 1490 (2301)
Q Consensus 1421 ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~ 1490 (2301)
.+.....++.++......+..+......+-.. ...+...+..+..++..+..........+...+.
T Consensus 879 ~l~~r~~le~~L~el~~el~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1311)
T TIGR00606 879 NLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ----DSPLETFLEKDQQEKEELISSKETSNKKAQDKVN 944 (1311)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666666666666666665555554332 2345566777777777777666666555554443
No 63
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.36 E-value=0.09 Score=77.87 Aligned_cols=65 Identities=5% Similarity=0.145 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1210 LIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQL 1278 (2301)
Q Consensus 1210 ~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~~l~~~~~~r~~~L~~~~ 1278 (2301)
.+.....++..+......+..+...-..+-.. -..+...+..+..+...+..........+...+
T Consensus 879 ~l~~r~~le~~L~el~~el~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1311)
T TIGR00606 879 NLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ----DSPLETFLEKDQQEKEELISSKETSNKKAQDKV 943 (1311)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555544444433333221 123445555666666666655555555554443
No 64
>KOG0035|consensus
Probab=98.34 E-value=8.4e-07 Score=115.01 Aligned_cols=301 Identities=16% Similarity=0.173 Sum_probs=206.1
Q ss_pred HHHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccCccCHHHHHHHHHHHHHHhcCCccccccc
Q psy18058 173 AKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAE 252 (2301)
Q Consensus 173 ~~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lgi~~~l~~e 252 (2301)
....||.||+..+.+|+++.+++| ++|..|.+||||+|.|.|+.+++......+..+|+.-.|+.+. .++++.|-
T Consensus 422 ~~~~lle~~ke~~~~~ea~~~~~~-~~~~~~e~~~ai~~~~~~~~~~~~~~~a~~~q~i~dq~~~~~~----ls~~r~pa 496 (890)
T KOG0035|consen 422 YGQALLEECKELTKKHEAFESDLS-AHQDNVEAFCAIAHELNELLYDDAKLVAADCQHICDQWDDLGQ----LSRKRRPA 496 (890)
T ss_pred hHHHHHHHHHhhcccccccccchh-hhhcchhHHHHHHHHhhhhhhhhhhhhhhhhhhccccccccch----hhhhhchh
Confidence 344689999999999999999999 8899999999999999999999999988888899888888774 27777777
Q ss_pred cccc-cCCChhhHHHHHHHHHHHhhhcchhhhhhcchhhhhhhhhhhhhhHHhhHHHHHHHHHHHHHHHHhhccCCCCCC
Q psy18058 253 DIFV-EQPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANS 331 (2301)
Q Consensus 253 dv~~-~~~de~si~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~s 331 (2301)
++.. ..||...+|+| .|..++..+.+|+......+.+.....+
T Consensus 497 l~~~~~~~dk~~~~~l------------------------------------e~a~Raa~~~~~l~~~~~d~~d~~~~~~ 540 (890)
T KOG0035|consen 497 LMQMEKVLDKLAVLTL------------------------------------EFAKRAAPFNNWLKGVQEDLQDNEISYS 540 (890)
T ss_pred hhhhhhhhHHHHHHHH------------------------------------HHHHHhhhhhhhhhhhhhhcccchhccc
Confidence 7653 33444444444 3444556667788877777777767788
Q ss_pred HHHHHHHHHHHhhhhhccCCCchhhhhhHHHHHHHHHHHHHhcCCCC---CCCCccCChhHHHHHHHHHHHHHHHHHHHH
Q psy18058 332 LVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKP---YTPKEGKMISDINKAWERLEKAEHERELAL 408 (2301)
Q Consensus 332 l~~~~~~l~~f~~~~~~ek~~~~~e~g~le~~~~~~~~~~~~~~~~~---~~p~~~~~~~~l~~~W~~Le~~~~~r~~~L 408 (2301)
+..++.+..++..|+.+ .|..-.+...+-....+...+....|-+. -.|.... .+...|..+......|...+
T Consensus 541 ire~~~~~~a~~~~k~t-~p~a~~~~~~~~~e~~e~~~~~~~~~~~~~~~~np~~~~---s~~~~~d~v~~~~~~~~~~~ 616 (890)
T KOG0035|consen 541 IREIQRLRAADLQFKST-LPEADGEGQKISDEEKEREKVSEQLNPKIEPDTNPYTTL---SIYGKWDAVLSSVPDRDSIE 616 (890)
T ss_pred hHhhhccchhhhhhccc-CccccchhhhhhhhhhHHHHhhhhcCccccccccccccc---ccccchhhhcccccccchhh
Confidence 99999999999999876 33332333333222333333333333221 1122222 27788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy18058 409 REELIRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEA 488 (2301)
Q Consensus 409 ~~el~r~e~le~l~~rf~~~a~~~e~Wl~e~~~~l~~~~~g~dl~~v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~ 488 (2301)
..+..++++.+.+..-|-..+...-.|+-....-.+.-.. .+-+..+.++..+...+.-+..+....+.+....+.+..
T Consensus 617 ~~~~~~q~~~~s~~~~~~q~an~~~p~vp~~~~e~s~~~~-~~~gt~e~~~~rLr~~~~~~~~~k~~~~~~~~~~q~~~~ 695 (890)
T KOG0035|consen 617 ANVHARQQPNESLRRVFAQQANLDGPWVPAKMEESSRINI-NDQGTLEDRLERLRETEERSMNYKSNGDLLAKQHQLMQE 695 (890)
T ss_pred HHHHHhhccCccccccccccccCCCcccCchhhccccccc-ccCCCHHHHHHHHHHHHHHhhccCcchhHHHHHHHHhhh
Confidence 9999999999999999999999999998766654443222 123344455555555555555577777766666665543
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 489 EKYHDIDRINARKENVLRLWNYLLELLKARR 519 (2301)
Q Consensus 489 ~~~~~~~~i~~r~~~l~~~W~~L~~~~~~R~ 519 (2301)
.--++...-..-...+.-.|+.+..-+....
T Consensus 696 ~~~~~~~~~~~~~e~~~~g~e~~~~~~~~~~ 726 (890)
T KOG0035|consen 696 DIIFENKHTRYTMEDLKVGWEELLTIIERTI 726 (890)
T ss_pred hccccccccccchhhcccccccccccccccc
Confidence 3223333333334456667888777665544
No 65
>PF15409 PH_8: Pleckstrin homology domain
Probab=98.28 E-value=2.9e-06 Score=79.77 Aligned_cols=86 Identities=23% Similarity=0.491 Sum_probs=65.8
Q ss_pred eEecceeeeccCCccCCCCCCceEEEEE--eCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEE
Q psy18058 2159 GTLVRKHEWEAIAKRASNRSWDKIFVSL--RGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRV 2236 (2301)
Q Consensus 2159 G~L~rK~~~~~~~k~~~~r~W~~~~~vL--~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l 2236 (2301)
|||.+| ++-+...|.++|||| ..+.|.||+++... ..+ +.|+|..|.+.+. ++...|-|
T Consensus 1 G~llKk-------rr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~------~~r--Gsi~v~~a~is~~----~~~~~I~i 61 (89)
T PF15409_consen 1 GWLLKK-------RRKPLQGWHKRYFVLDFEKGTLSYYRNQNSG------KLR--GSIDVSLAVISAN----KKSRRIDI 61 (89)
T ss_pred Ccceee-------ccccCCCceeEEEEEEcCCcEEEEEecCCCC------eeE--eEEEccceEEEec----CCCCEEEE
Confidence 677776 333478999999999 89999999987722 223 4778888866553 34556777
Q ss_pred EeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2237 KADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2237 ~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.+ ++..|.+.|.|+.+.+.|+.+|+.|
T Consensus 62 ds-g~~i~hLKa~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 62 DS-GDEIWHLKAKSQEDFQRWVSALQKA 88 (89)
T ss_pred Ec-CCeEEEEEcCCHHHHHHHHHHHHhc
Confidence 64 4569999999999999999999864
No 66
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.26 E-value=4.2e-06 Score=84.00 Aligned_cols=95 Identities=24% Similarity=0.404 Sum_probs=71.9
Q ss_pred EeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEE
Q psy18058 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVK 2237 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~ 2237 (2301)
+|+|.++..... .+...|+++|++|.++.|++|++..... . .. ..+++.+..|....+-..++++|.+.
T Consensus 2 ~g~l~~~~~~~~----~~~~~w~~~~~~l~~~~l~~~~~~~~~~--~----~~-~~~~l~~~~v~~~~~~~~~~~~F~i~ 70 (99)
T cd00900 2 EGYLLKLGSDDV----SKGKRWKRRWFFLFDDGLLLYKSDDKKE--I----KP-GSIPLSEISVEEDPDGSDDPNCFAIV 70 (99)
T ss_pred ccEEEEeCCCcc----ccccCceeeEEEEECCEEEEEEcCCCCc--C----CC-CEEEccceEEEECCCCCCCCceEEEE
Confidence 577766622211 1358899999999999999999987321 1 10 46777777766554433578999999
Q ss_pred eCC--CCEEEEccCCHHHHHHHHHHHHH
Q psy18058 2238 ADN--GAEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2238 ~~~--g~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
+.+ +..|.|+|++..++..|+.+|..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 71 TKDRGRRVFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred CCCCCcEEEEEEcCCHHHHHHHHHHHhc
Confidence 986 88999999999999999999975
No 67
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=98.26 E-value=3e-06 Score=86.02 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=55.3
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEe-CcEEEEEecCCCCCCCC-----CccCCCCcceeccCccccc-------
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLR-GTLLYFYKDQKSAKSSP-----EIYYKNETPFELRGGSAQV------- 2223 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~-~~~L~~ykd~~~~~~~~-----~~~~~~~~~i~l~~a~~~~------- 2223 (2301)
++|||+++ +.+ -.++|+++||||. ++.|.|||......... .....+.+.++........
T Consensus 1 k~G~l~K~-----~~~--~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
T PF15413_consen 1 KEGYLYKW-----GNK--FGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKN 73 (112)
T ss_dssp EEEEEEE-------TT--S-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T
T ss_pred CCceEEEe-----cCC--CCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCC
Confidence 68999887 333 2579999999999 99999999932111000 0011111122211111111
Q ss_pred ccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2224 ADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2224 ~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
+.+ .....+|.+.|+.+ +|.|.|++.+|..+||.+|..|
T Consensus 74 ~~~-~~~~~~~~i~T~~k-t~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 74 PFG-EIHLKVFSIFTPTK-TFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp --S-S-SSEEEEEE-SS--EEEEEESSHHHHHHHHHHHHH-
T ss_pred ccc-CcCCCCcEEECCCc-EEEEEECCHHHHHHHHHHHHhC
Confidence 111 12357899988876 9999999999999999999874
No 68
>PRK04863 mukB cell division protein MukB; Provisional
Probab=98.25 E-value=0.13 Score=74.87 Aligned_cols=401 Identities=12% Similarity=0.117 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1523 NVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQ-LKKAVDERRSKLIQSEKAQQYL 1601 (2301)
Q Consensus 1523 ~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~-L~~~~~~R~~~L~~a~~~qqf~ 1601 (2301)
.+..+..+...+..++..+..........+..+-.. ...+..-+-.++-.... |.+++.+-...+..+.++..|.
T Consensus 838 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~y~ 913 (1486)
T PRK04863 838 ELRQLNRRRVELERALADHESQEQQQRSQLEQAKEG----LSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFV 913 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhchhhhhcCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555566666666665555544444332110 00000000011111111 3344444444555555555554
Q ss_pred hchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-----------HHHhhhcCCCChH
Q psy18058 1602 FDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET-----------ARQLTSEMHPESD 1670 (2301)
Q Consensus 1602 ~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~-----------~~~L~~~~~~~~~ 1670 (2301)
.+......=+...-..+ ..|+.....+...++..++........+..|... +..++.....-.+
T Consensus 914 ~~~~~~L~qLE~~l~~L-----~~Dp~~~e~lr~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~l~~~~~~~~ 988 (1486)
T PRK04863 914 QQHGNALAQLEPIVSVL-----QSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNE 988 (1486)
T ss_pred HHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHhhcchhhhH
Confidence 43333333232222222 2344444444444444444444444444444332 2223333333456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHHHHHHHHHHHH
Q psy18058 1671 QIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF-MLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRD 1749 (2301)
Q Consensus 1671 ~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~-qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~~l~~k~~~f~~e 1749 (2301)
.|...+..+.+.+..+.....+-...+....... .+...++....=+.+.+..+..-.++.|...-......=+++...
T Consensus 989 ~Le~~Le~iE~~~~~areql~qaq~q~~q~~q~l~slksslq~~~e~L~E~eqe~~~~g~~~~~~~~~~~~~~~~~l~~~ 1068 (1486)
T PRK04863 989 KLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARARRDELHAR 1068 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHhHHHHHHH
Confidence 7888889999999888888888877777776665 566666666666666666555444444444433333332444444
Q ss_pred HhhhhchHHHHH-----------HHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhc
Q psy18058 1750 TEAIGTERVAAV-----------NGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQ--MLVASRELHKFFHD 1816 (2301)
Q Consensus 1750 ~~~~~~~rv~~v-----------~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~--~L~~a~~~~~f~~d 1816 (2301)
+...+ .|-..+ ..+...| .....+...+.+.+..+...|..+..++..-.- .|.... - -|-.
T Consensus 1069 l~~~~-~~~~~~~~~~~~re~EIe~L~kkL-~~~~~e~~~~re~I~~aK~~W~~v~~~~~~~~~~~~l~~~~--~-~~~~ 1143 (1486)
T PRK04863 1069 LSANR-SRRNQLEKQLTFCEAEMDNLTKKL-RKLERDYHEMREQVVNAKAGWCAVLRLVKDNGVERRLHRRE--L-AYLS 1143 (1486)
T ss_pred HHHhH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhhHhh--h-hccC
Confidence 43322 222222 1111111 222334556778888888888888877643211 111000 0 0111
Q ss_pred HHHHHHhHHHHhhhCccccCCCcchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH
Q psy18058 1817 CKDILGRISEKHHAMSDELGRDAGSVNTLQRKH---QNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVV 1893 (2301)
Q Consensus 1817 ~~e~l~wi~ek~~~l~~~~g~d~~~v~~l~rkh---~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~ 1893 (2301)
++++-+.....-..+--.++.+ +.+...++-- .--++-+.-.-.-++.+.+.+.+=+. .......-...|.
T Consensus 1144 ~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~r~r~r~di~-----~~~~p~et~e~Le 1217 (1486)
T PRK04863 1144 ADELRSMSDKALGALRLAVADN-EHLRDVLRLSEDPKRPERKVQFYIAVYQHLRERIRQDII-----RTDDPVEAIEQME 1217 (1486)
T ss_pred chhhHHHHHHHHHHHHHhccCc-HHHHHHHhhccCCCchhHHHhHHHHHHHHHHHHHhhhhh-----hcCCHHHHHHHHH
Confidence 2222221111111111111111 1111111110 01111222222333444444333111 1122333445566
Q ss_pred HHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy18058 1894 NAWASLQNACDARKQKLGDTGD--LFKFLIMVRTLMLWMDDVVRQMNTSEKA 1943 (2301)
Q Consensus 1894 ~~W~~L~~~~~~R~~~L~~a~~--~~~f~~~~~dl~~Wl~~~~~~~~~~e~~ 1943 (2301)
.....+......+..+|....+ ...+...++.-..|+..|...|...+.+
T Consensus 1218 ~ei~rl~~~L~e~Er~L~~s~eEVa~~l~~rI~~a~~~V~~mN~~L~~i~f~ 1269 (1486)
T PRK04863 1218 IELSRLTEELTSREQKLAISSESVANIIRKTIQREQNRIRMLNQGLQNISFG 1269 (1486)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 6666666666667666653332 4456677888889999999988876653
No 69
>KOG4407|consensus
Probab=98.16 E-value=1.3e-07 Score=121.39 Aligned_cols=113 Identities=21% Similarity=0.268 Sum_probs=95.7
Q ss_pred ccceEeEecceeeeccCCccC--CCCCCceEEEEEeCcEEEEEecCCCCCCC------CCccCCCCcceeccCccccccc
Q psy18058 2154 ADHMEGTLVRKHEWEAIAKRA--SNRSWDKIFVSLRGTLLYFYKDQKSAKSS------PEIYYKNETPFELRGGSAQVAD 2225 (2301)
Q Consensus 2154 ~~~~eG~L~rK~~~~~~~k~~--~~r~W~~~~~vL~~~~L~~ykd~~~~~~~------~~~~~~~~~~i~l~~a~~~~~~ 2225 (2301)
...|+|||+.++.....||++ +.|.|+..|.+|.|+.|++|++....... ++.......++++.+|.+++.+
T Consensus 922 d~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltdI~y 1001 (1973)
T KOG4407|consen 922 DSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTDIQY 1001 (1973)
T ss_pred hhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhhhhh
Confidence 346999999999999999887 58999999999999999999998752221 2222334668999999999988
Q ss_pred CCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2226 DYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2226 d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
.-+||+|||||++.+-++|+||+.|.++|..|+..++...+
T Consensus 1002 setkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St~ 1042 (1973)
T KOG4407|consen 1002 SETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSSTT 1042 (1973)
T ss_pred hhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhccc
Confidence 77999999999999999999999999999999999866543
No 70
>KOG0161|consensus
Probab=98.16 E-value=0.19 Score=73.32 Aligned_cols=159 Identities=12% Similarity=0.108 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcHHHHHHhHHHHhhhC---ccccCCCcchHHHHHHHHHHH
Q psy18058 1777 ATIAEWKDGLNEAWQDLLELIETRTQMLVASRE-LHKFFHDCKDILGRISEKHHAM---SDELGRDAGSVNTLQRKHQNF 1852 (2301)
Q Consensus 1777 ~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~f~~d~~e~l~wi~ek~~~l---~~~~g~d~~~v~~l~rkh~~~ 1852 (2301)
..|.+.......+..-|..-+.+.+..++.+.. -..--.++.++-..|....... +..--..-..+..+....+.-
T Consensus 1656 ~e~~~q~~~aerr~~~l~~E~eeL~~~l~~~~Rarr~aE~e~~E~~e~i~~~~~~~s~l~~~KrklE~~i~~l~~elee~ 1735 (1930)
T KOG0161|consen 1656 EELLEQLAEAERRLAALQAELEELREKLEALERARRQAELELEELAERVNELNAQNSSLTAEKRKLEAEIAQLQSELEEE 1735 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 356666667777888888888888888877765 3445556777777777754322 211111223455555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHH
Q psy18058 1853 LQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGD--LFKFLIMVRTLMLWM 1930 (2301)
Q Consensus 1853 e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~~--~~~f~~~~~dl~~Wl 1930 (2301)
..++.+...++......|.++...... =+.....+...=..|...+.+...+|..+.. .-.+-....-|.+-+
T Consensus 1736 ~~~~~~~~Er~kka~~~a~~~~~el~~-----Eq~~~~~le~~k~~LE~~~kdLq~rL~e~E~~a~~~~k~~i~~Leari 1810 (1930)
T KOG0161|consen 1736 QSELRAAEERAKKAQADAAKLAEELRK-----EQETSQKLERLKKSLERQVKDLQLRLDEAEQAALKGGKKQIAKLEARI 1810 (1930)
T ss_pred HHHHHhhHHHHHHHHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHH
Confidence 666666666666666666665432221 1122233444445566666677777777764 334445566666666
Q ss_pred HHHHHHhccC
Q psy18058 1931 DDVVRQMNTS 1940 (2301)
Q Consensus 1931 ~~~~~~~~~~ 1940 (2301)
.+.+..+..+
T Consensus 1811 r~LE~~l~~E 1820 (1930)
T KOG0161|consen 1811 RELESELEGE 1820 (1930)
T ss_pred HHHHHHHhHh
Confidence 6666666554
No 71
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.08 E-value=1.7e-05 Score=78.09 Aligned_cols=96 Identities=20% Similarity=0.269 Sum_probs=68.2
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
.+||+|.+- .+| ..|.++||.+.+-.||..+... ....+..-+.|+|.+..+.-..|-.+.+|.|.
T Consensus 3 ikEG~L~K~-----~~k----~~~~R~~FLFnD~LlY~~~~~~-----~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~ 68 (99)
T cd01220 3 IRQGCLLKL-----SKK----GLQQRMFFLFSDLLLYTSKSPT-----DQNSFRILGHLPLRGMLTEESEHEWGVPHCFT 68 (99)
T ss_pred eeEEEEEEE-----eCC----CCceEEEEEccceEEEEEeecC-----CCceEEEEEEEEcCceEEeeccCCcCCceeEE
Confidence 479999664 222 4577666666555554443221 01123455689999998887666346789999
Q ss_pred EEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2236 l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
|.++ ...|.++|+|++|+..|+.+|+.||.
T Consensus 69 I~~~-~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 69 IFGG-QCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EEcC-CeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 9976 45899999999999999999999885
No 72
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.03 E-value=3.1e-05 Score=74.45 Aligned_cols=100 Identities=23% Similarity=0.414 Sum_probs=67.7
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccC--------cccccccCCC
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRG--------GSAQVADDYS 2228 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~--------a~~~~~~d~~ 2228 (2301)
.||||.-. ..+|+ .+.+.|++.|+||++..|+||......... .|...+++.. +.--+..+-+
T Consensus 2 lEGwlsvP---~~~~~-~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~-----~p~~vldl~~~fhv~~V~asDVi~a~~k 72 (112)
T cd01242 2 MEGWLSLP---NRTNK-SRKPGWKKQYVVVSSRKILFYNDEQDKENS-----TPSMILDIDKLFHVRPVTQGDVYRADAK 72 (112)
T ss_pred cceeEEcc---CCCCc-cccCCceEEEEEEeCCEEEEEecCccccCC-----CcEEEEEccceeeeecccHHHeeecCcc
Confidence 68998543 12233 223689999999999999999976532211 1222333331 1112233546
Q ss_pred CCCceEEEEeCC-CCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADN-GAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2229 kr~~vf~l~~~~-g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
.-|.+|++..++ +...|+-|+++.|-..|+.+|..-|
T Consensus 73 DiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 73 EIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred cCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 678999998754 6899999999999999999997643
No 73
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.03 E-value=3.2e-05 Score=71.54 Aligned_cols=94 Identities=16% Similarity=0.261 Sum_probs=68.9
Q ss_pred ceEeEecceeeec-cCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccc-cccCCCCCCce
Q psy18058 2156 HMEGTLVRKHEWE-AIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQ-VADDYSKKKHV 2233 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~-~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~-~~~d~~kr~~v 2233 (2301)
...|||.--..-. .||. +.+||||+..+|++|||.... .+...|+|.|..+- +..++.+|+|+
T Consensus 2 irkgwl~~~n~~~m~ggs-------K~~WFVLt~~~L~wykd~eeK--------E~kyilpLdnLk~Rdve~gf~sk~~~ 66 (110)
T cd01256 2 IRKGWLSISNVGIMKGGS-------KDYWFVLTSESLSWYKDDEEK--------EKKYMLPLDGLKLRDIEGGFMSRNHK 66 (110)
T ss_pred eeeeeEEeeccceecCCC-------cceEEEEecceeeeecccccc--------cccceeeccccEEEeecccccCCCcE
Confidence 4567776654333 2333 789999999999999998733 34457788765543 45578899999
Q ss_pred EEEEeCCCC-------EEEEccCCHHHHHHHHHHHHHH
Q psy18058 2234 FRVKADNGA-------EYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2234 f~l~~~~g~-------~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|.|--++++ +.-+.|++.+++.+|-.++-.|
T Consensus 67 FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 67 FALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred EEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 999876653 5568999999999998877553
No 74
>PRK04863 mukB cell division protein MukB; Provisional
Probab=98.01 E-value=0.33 Score=70.76 Aligned_cols=108 Identities=11% Similarity=0.226 Sum_probs=74.8
Q ss_pred HHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHhcHHHHHHhHHHHHHhhccCCCCCCh
Q psy18058 1337 QQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSN-REVLIHQTCDDIDSWMNELEKQIENEDTGSDL 1415 (2301)
Q Consensus 1337 ~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~-~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl 1415 (2301)
-..+..++.......+.|+..+..+......+..........+..+. ....+...+..+..-+.+.+..|..-.+..|.
T Consensus 973 y~~~~~~l~~~~~~~~~Le~~Le~iE~~~~~areql~qaq~q~~q~~q~l~slksslq~~~e~L~E~eqe~~~~g~~~~~ 1052 (1486)
T PRK04863 973 YEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADS 1052 (1486)
T ss_pred HHHHHhHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 34555666666777888999999999999999999988888888884 45678888888888899998888865555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1416 ASVNILMQKQQMIETQMAVKAKQVSELET 1444 (2301)
Q Consensus 1416 ~~v~~ll~~~~~le~ei~~~~~~v~~l~~ 1444 (2301)
..-...-..-..|...+...+.+-..|..
T Consensus 1053 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 1081 (1486)
T PRK04863 1053 GAEERARARRDELHARLSANRSRRNQLEK 1081 (1486)
T ss_pred cHHHHHHHhHHHHHHHHHHhHHHHHHHHH
Confidence 33333222225555555555554444443
No 75
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.96 E-value=6.2e-05 Score=73.65 Aligned_cols=100 Identities=23% Similarity=0.397 Sum_probs=67.7
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceecc---------CcccccccCC
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR---------GGSAQVADDY 2227 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~---------~a~~~~~~d~ 2227 (2301)
.||||.-. ..+|+| |.|+++|+||++..|+||.........|.. .+.-.|+++ .+.--+..+-
T Consensus 4 ~EGwvkvP---~~~~~k---rGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~--~~~~vLdlrD~~fsV~~VtasDvi~a~~ 75 (122)
T cd01243 4 YEGHVKIP---KPGGVK---KGWQRALVVVCDFKLFLYDIAEDRASQPSV--VISQVLDMRDPEFSVSSVLESDVIHASK 75 (122)
T ss_pred ceeeEecc---CCCCcc---cCceEEEEEEeCCEEEEEeCCccccCCccC--ceeEEEEcCCCCEEEEEecHHHccccCc
Confidence 68998543 224443 689999999999999999865532222211 122234443 2222233455
Q ss_pred CCCCceEEEEeC------CCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2228 SKKKHVFRVKAD------NGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2228 ~kr~~vf~l~~~------~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
+.-|.+|+|++. .+...||-|+|+.|-..|+.+|+.-
T Consensus 76 kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 76 KDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred ccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 667899999753 4578999999999999999999753
No 76
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.95 E-value=3.4e-05 Score=71.88 Aligned_cols=85 Identities=19% Similarity=0.366 Sum_probs=62.5
Q ss_pred CCCCceEEEEEe----CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCH
Q psy18058 2176 NRSWDKIFVSLR----GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKND 2251 (2301)
Q Consensus 2176 ~r~W~~~~~vL~----~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~ 2251 (2301)
.-.|.++-.+|+ |..|.||-.-.+.++.| -.+.++.++..+.-..+-++.++.|+|.|+..++.+|+|.|.|.
T Consensus 18 ~~~WqkcRl~L~~~~gg~~le~~~~~pPKssrp---k~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~ 94 (107)
T cd01231 18 GARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKP---KLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDE 94 (107)
T ss_pred ccccceeeEEEEecCCCceEEEEccCCCCCCCC---ccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCH
Confidence 356998888887 46677776522112222 12334555555555556688899999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy18058 2252 EEMNKWVTALSN 2263 (2301)
Q Consensus 2252 ~~~~~W~~~i~~ 2263 (2301)
.+|++|+..|+.
T Consensus 95 ~q~~SWla~Ir~ 106 (107)
T cd01231 95 QQLNSWLAELRY 106 (107)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 77
>KOG2046|consensus
Probab=97.85 E-value=4e-05 Score=81.81 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCCCCchhHHHhhHHHHHHHHHhccc
Q psy18058 47 ADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRV 126 (2301)
Q Consensus 47 ~~~~~~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~~~~~~~~~~N~~~al~~~~~~~~ 126 (2301)
+...+....+-.+.||-..+......-.|+..-|+||++||+|+++|.|...++.+.++|.++++||++.-+.+++..||
T Consensus 19 ~~k~~~~~~~el~~WI~~~~~~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~~s~~~f~qmEnIs~Fi~a~~~ygv 98 (193)
T KOG2046|consen 19 ESKYDDELEKELREWIENVVLTELPARGDFQDLLKDGVILCKLINKLYPGVVKKINESKMAFVQMENISNFIKAAKKYGV 98 (193)
T ss_pred hcccCHHHHHHHHHHHHHhhccCCCcccCHHHHHcchHHHHHHHHHhCcCcccccccccccHHHHHHHHHHHHHHHhcCC
Confidence 33445566778899999864333334678888899999999999999996666666889999999999999999999998
Q ss_pred ccccCC-cccccCCc
Q psy18058 127 HLENMG-SHDIVDGN 140 (2301)
Q Consensus 127 ~l~~i~-~~di~~g~ 140 (2301)
+-+.+- +.|..+|.
T Consensus 99 ~~~d~FqtvDLfE~k 113 (193)
T KOG2046|consen 99 PEVDLFQTVDLFEGK 113 (193)
T ss_pred ChhhcccccccccCC
Confidence 866543 34555554
No 78
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.83 E-value=9.3e-05 Score=71.45 Aligned_cols=97 Identities=16% Similarity=0.332 Sum_probs=65.9
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCc-EEE---EEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCc
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGT-LLY---FYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKH 2232 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~-~L~---~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~ 2232 (2301)
|+|||+.+- |++..-+|.++||...++ .++ .+..++. ...+ ........|.|..|.+..+.. ..|.+
T Consensus 1 k~GYLy~~~------k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~-~~~~-g~v~~~e~~~l~sc~~r~~~~-~dRRF 71 (104)
T cd01249 1 KEGYLYMQE------KSKFGGSWTKYYCTYSKETRIFTMVPFNQKTK-TDMK-GAVAQDETLTLKSCSRRKTES-IDKRF 71 (104)
T ss_pred CCceEEEEc------CCCCCCeEEEEEEEEEcCCcEEEEEecccccc-cccC-cccccceEEeeeeccccccCC-cccee
Confidence 589998872 344456899999998864 332 2222210 0011 112344567777777776655 67889
Q ss_pred eEEEEeCCC-CEEEEccCCHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNG-AEYLFQAKNDEEMNKWVTALS 2262 (2301)
Q Consensus 2233 vf~l~~~~g-~~~lfqa~~~~~~~~W~~~i~ 2262 (2301)
+|.|.++++ ..+.|||.|+.+...||.|+.
T Consensus 72 CFei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 72 CFDVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred eEeeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 999977655 379999999999999999984
No 79
>KOG0994|consensus
Probab=97.82 E-value=0.31 Score=64.48 Aligned_cols=183 Identities=20% Similarity=0.216 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHhH-H------HHHHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHh
Q psy18058 618 DAYSELVKLAVERRARLEES-R------KLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAH 690 (2301)
Q Consensus 618 ~~~~~L~~~~~~R~~~Le~~-~------~l~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~ 690 (2301)
..|+.+.+....|-.+|... . .+-.|-.+..++..-|.+...+|+...+ +...+..+-.....|.+.|.+.
T Consensus 1167 ~~WD~il~~L~~rt~rl~~~A~~l~~tGv~gay~s~f~~me~kl~~ir~il~~~sv--s~~~i~~l~~~~~~lr~~l~~~ 1244 (1758)
T KOG0994|consen 1167 QTWDAILQELALRTHRLINRAKELKQTGVLGAYASRFLDMEEKLEEIRAILSAPSV--SAEDIAQLASATESLRRQLQAL 1244 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhHHHHHHHHHHHHHHHhcCCCc--cHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666665555432 2 2334777888888888888888876555 4566777777788888888887
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHH-hhhHHHHHHHHHHHH
Q psy18058 691 ESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEE--------AVDF-HQFFADAVDVDIWML 761 (2301)
Q Consensus 691 ~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~--------a~~~-~qf~~~~~el~~Wl~ 761 (2301)
...+..+...-.++........ ..++.|+.....|.....+-+.+++. |+.. ...+....+++.-..
T Consensus 1245 ~e~L~~~E~~Lsdi~~~~~~a~----~~LesLq~~~~~l~~~~keL~e~~~~ik~sdi~GA~~~~r~a~~~s~ea~~r~~ 1320 (1758)
T KOG0994|consen 1245 TEDLPQEEETLSDITNSLPLAG----KDLESLQREFNGLLTTYKELREQLEKIKESDILGAFNSTRHAYEQSAEAERRVD 1320 (1758)
T ss_pred Hhhhhhhhhhhhhhhhccchhh----hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHhhh
Confidence 7777777666555544433222 22344444444444444444433332 2221 233444444444333
Q ss_pred HHHHhhhccCCCCChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhh
Q psy18058 762 DTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQ 809 (2301)
Q Consensus 762 e~~~~l~~~~~g~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~ 809 (2301)
.....+.+ ..+...++.++.+.+.=-.+.......+..+......
T Consensus 1321 ~s~~~l~s---~~~~sR~e~l~~k~k~~f~~~~~n~~~L~el~~~l~s 1365 (1758)
T KOG0994|consen 1321 ASSRELAS---LVDQSRVEELLVKQKGDFGGLAENSRLLVELRAELSS 1365 (1758)
T ss_pred hhhhcccc---hhhhhHHHHHHHHhhhcccccccccHHHHHHHHHhcC
Confidence 33333332 2233356666655443333344555555555544443
No 80
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.63 E-value=0.0001 Score=71.00 Aligned_cols=95 Identities=27% Similarity=0.423 Sum_probs=62.6
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCC-----C
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK-----K 2231 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr-----~ 2231 (2301)
++|+|+-| .+|| +||+++||+|+++.|||+...++..+. +-.....+.+..+-...++.|+ +
T Consensus 2 ~~g~LylK----~~gk----KsWKk~~f~LR~SGLYy~~Kgksk~sr-----dL~cl~~f~~~nvY~~~~~kKk~kAPTd 68 (114)
T cd01259 2 MEGPLYLK----ADGK----KSWKKYYFVLRSSGLYYFPKEKTKNTR-----DLACLNLLHGHNVYTGLGWRKKYKSPTD 68 (114)
T ss_pred ccceEEEc----cCCC----ccceEEEEEEeCCeeEEccCCCcCCHH-----HHHHHHhcccCcEEEEechhhccCCCCC
Confidence 68999887 3444 899999999999999988766532111 1111233334443333333332 4
Q ss_pred ceEEEEeCC------CCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2232 HVFRVKADN------GAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2232 ~vf~l~~~~------g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|.|.|+.+. ..--+|.|+|+..+.-|+.+|.-+
T Consensus 69 ~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~ 107 (114)
T cd01259 69 YCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIA 107 (114)
T ss_pred ceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHH
Confidence 788886442 124579999999999999999754
No 81
>KOG0994|consensus
Probab=97.57 E-value=0.7 Score=61.44 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hhHh------HHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHH
Q psy18058 933 LNHDWAGLREKAEGKRDELN-SAHG------VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDL 1005 (2301)
Q Consensus 933 L~~rw~~l~~~~~~r~~~L~-~a~~------~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el 1005 (2301)
--..|+.+...+..+..+|. .+.. +..|..++.++..-|.+....|+.. ....+.+..+-...+.+++.|
T Consensus 1165 CF~~WD~il~~L~~rt~rl~~~A~~l~~tGv~gay~s~f~~me~kl~~ir~il~~~---svs~~~i~~l~~~~~~lr~~l 1241 (1758)
T KOG0994|consen 1165 CFQTWDAILQELALRTHRLINRAKELKQTGVLGAYASRFLDMEEKLEEIRAILSAP---SVSAEDIAQLASATESLRRQL 1241 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhHHHHHHHHHHHHHHHhcCC---CccHHHHHHHHHHHHHHHHHH
Confidence 34567777666666665555 2222 3568888888888888888888664 345566667777778888888
Q ss_pred HHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1006 AAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060 (2301)
Q Consensus 1006 ~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~ 1060 (2301)
.+....+..+...-..+....+.. ...++.|+.....|.....+-.+.++.
T Consensus 1242 ~~~~e~L~~~E~~Lsdi~~~~~~a----~~~LesLq~~~~~l~~~~keL~e~~~~ 1292 (1758)
T KOG0994|consen 1242 QALTEDLPQEEETLSDITNSLPLA----GKDLESLQREFNGLLTTYKELREQLEK 1292 (1758)
T ss_pred HHHHhhhhhhhhhhhhhhhccchh----hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777777766655554444432 234556666666666666665555554
No 82
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.55 E-value=0.0002 Score=70.27 Aligned_cols=98 Identities=12% Similarity=0.284 Sum_probs=65.5
Q ss_pred eEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceecc-----CcccccccC-CCCCCc
Q psy18058 2159 GTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR-----GGSAQVADD-YSKKKH 2232 (2301)
Q Consensus 2159 G~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~-----~a~~~~~~d-~~kr~~ 2232 (2301)
|||.-+-. .+| .+.++|+.+|++|+|+.|++|+...-....-. .|...++|- .+......| ..+++|
T Consensus 3 GW~~E~~~--~~~--~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~---~p~~~y~L~~~atrvv~~~~~~~~~~~~~~ 75 (108)
T cd01258 3 GWVNEQLS--GDD--ESSQRWRPRFLALKGSEFLFFETPPLSVEDWS---RPLYVYKLYDVATRLVKNSSTRRLNDQRDN 75 (108)
T ss_pred eecccccC--CCC--ccccccceEEEEEcCCcEEEEeCCCCCHHHHh---ChhhhChhHHhhhheeccCCccCcCCCCce
Confidence 77766622 122 12489999999999999999997763222111 122222222 111111111 237889
Q ss_pred eEEEEeCCC-CEEEEccCCHHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNG-AEYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2233 vf~l~~~~g-~~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
+|.+++..| ..++|..++..|+..|.++|..
T Consensus 76 ~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 76 CFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred EEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 999999999 9999999999999999999964
No 83
>KOG0690|consensus
Probab=97.52 E-value=0.00017 Score=81.73 Aligned_cols=104 Identities=17% Similarity=0.283 Sum_probs=72.4
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEe-CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLR-GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK 2230 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~-~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr 2230 (2301)
...|.+||||+++.+- .++|+.+||+|. ++.|.=|+.+....... ..|...+.+.+|..... + .-|
T Consensus 12 ~~~vvkEgWlhKrGE~--------IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~---p~pLNnF~v~~cq~m~~-e-rPr 78 (516)
T KOG0690|consen 12 QEDVVKEGWLHKRGEH--------IKNWRPRYFLLFNDGTLLGYRSKPKEVQPT---PEPLNNFMVRDCQTMKT-E-RPR 78 (516)
T ss_pred hhhhHHhhhHhhcchh--------hhcccceEEEEeeCCceEeeccCCccCCCC---cccccchhhhhhhhhhc-c-CCC
Confidence 3567899999998544 499999999998 57777788765322211 12333445555554332 2 468
Q ss_pred CceEEEEeCCCC---EEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2231 KHVFRVKADNGA---EYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2231 ~~vf~l~~~~g~---~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
||.|-+++-... +--|.++|.++.+.|+.||+++....
T Consensus 79 PntFiiRcLQWTTVIERTF~ves~~eRq~W~~AIq~vsn~l 119 (516)
T KOG0690|consen 79 PNTFIIRCLQWTTVIERTFYVESAEERQEWIEAIQAVSNRL 119 (516)
T ss_pred CceEEEEeeeeeeeeeeeeecCCHHHHHHHHHHHHHHhhhh
Confidence 999999865443 45689999999999999999876543
No 84
>KOG0521|consensus
Probab=97.30 E-value=0.075 Score=71.92 Aligned_cols=99 Identities=22% Similarity=0.395 Sum_probs=79.0
Q ss_pred CccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCc
Q psy18058 2153 DADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKH 2232 (2301)
Q Consensus 2153 ~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~ 2232 (2301)
....++|+|+.|-.. ..+.|.++||-..++.+.+++.-..+. .....+|..|.+-..++...|++
T Consensus 272 ~~~~~~~~l~~k~~~-------~~~tw~r~~f~~q~~~l~~~~r~~~~~--------~~~~~dL~~csvk~~~~~~drr~ 336 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASN-------ASKTWKRRWFSIQDGQLGYQHRGADAE--------NVLIEDLRTCSVKPDAEQRDRRF 336 (785)
T ss_pred chhhhhhhhhhhccc-------chhhHHhhhhhhhcccccccccccccc--------ccccccchhccccCCccccccee
Confidence 344567888766221 257899999999999999888766221 14467888888888888778999
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
.|++.++++ .|+|||.|+.+-..||.+|+++|..
T Consensus 337 CF~iiS~tk-s~~lQAes~~d~~~Wi~~i~nsi~s 370 (785)
T KOG0521|consen 337 CFEIISPTK-SYLLQAESEKDCQDWISALQNSILS 370 (785)
T ss_pred eEEEecCCc-ceEEecCchhHHHHHHHHHHHHHHH
Confidence 999999766 8999999999999999999998864
No 85
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.27 E-value=0.00031 Score=65.78 Aligned_cols=94 Identities=21% Similarity=0.334 Sum_probs=67.5
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEE-----EEEecCCCCCCCCCccCCCCcceeccCcccccccCCC---
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLL-----YFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS--- 2228 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L-----~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~--- 2228 (2301)
+.|||.+. ||.. .++|+++||||.|-+- +-|+.+++ .|...+.|.|-+++....-+
T Consensus 4 ~sGyL~k~-----Gg~~--~KkWKKRwFvL~qvsQYtfamcsy~ekks---------~P~e~~qldGyTvDy~~~~~~~~ 67 (117)
T cd01234 4 HCGYLYAI-----GKNV--WKKWKKRFFVLVQVSQYTFAMCSYREKKA---------EPTEFIQLDGYTVDYMPESDPDP 67 (117)
T ss_pred eeEEEEec-----cchh--hhhhheeEEEEEchhHHHHHHHhhhhhcC---------CchhheeecceEEeccCCCCCCc
Confidence 68999776 5543 7999999999997443 33555551 35567888888777643222
Q ss_pred -------CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2229 -------KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2229 -------kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
.-++-|... ..|.+..|.++++.+..-||+++=.|...
T Consensus 68 ~~~~~~~gg~~ff~av-kegd~~~fa~~de~~r~lwvqa~yratgq 112 (117)
T cd01234 68 NSELSLQGGRHFFNAV-KEGDELKFATDDENERHLWVQAMYRATGQ 112 (117)
T ss_pred ccccccccchhhhhee-ccCcEEEEeccchHHHHHHHHHHHHHcCc
Confidence 344666654 34678999999999999999999887653
No 86
>KOG0161|consensus
Probab=97.25 E-value=3 Score=61.53 Aligned_cols=249 Identities=14% Similarity=0.157 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHHH
Q psy18058 1352 ELIGPKISDLGQQFDDLETTTKDKGERLFDSNRE-VLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIET 1430 (2301)
Q Consensus 1352 ~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~~-~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le~ 1430 (2301)
..+..+-.++...|..+......-...|..-.+. ..+.+.-..++.=+.++|..|.... ......++..+.+..
T Consensus 1565 r~l~ek~Ee~E~~rk~~~~~i~~~q~~Le~E~r~k~e~~r~KKkle~di~elE~~ld~an-----k~~~d~~K~lkk~q~ 1639 (1930)
T KOG0161|consen 1565 RRLQEKDEEIEELRKNLQRQLESLQAELEAETRSKSEALRSKKKLEGDINELEIQLDHAN-----KANEDAQKQLKKLQA 1639 (1930)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH-----HhhHHHHHHHHhhHH
Confidence 4466667777777777776666555555432111 1222322233333333333332100 011123333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHhhhc
Q psy18058 1431 QMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAY-QFRRDIEDEKLWIAEKL 1509 (2301)
Q Consensus 1431 ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~-qf~~d~~~~~~Wl~e~~ 1509 (2301)
.+......++..... -+++.+.+.....|+..+...+.+.+..++.+...- +...++.+...=|...-
T Consensus 1640 ~~k~lq~~~e~~~~~-----------~~e~~~q~~~aerr~~~l~~E~eeL~~~l~~~~Rarr~aE~e~~E~~e~i~~~~ 1708 (1930)
T KOG0161|consen 1640 QLKELQRELEDAQRA-----------REELLEQLAEAERRLAALQAELEELREKLEALERARRQAELELEELAERVNELN 1708 (1930)
T ss_pred HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 444444444433222 245677788889999999999999999998875544 66666665555555533
Q ss_pred ccccCcccCCCHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCChHH---HHHHHHHHHHHHHHHHHHHHH
Q psy18058 1510 PSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAE---FTSLIEDLMDRWQQLKKAVDE 1586 (2301)
Q Consensus 1510 ~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~~~---I~~~l~~L~~~w~~L~~~~~~ 1586 (2301)
...++ ....-..+-.+...++.++..-........+.|+.....+...+.. =++....+...-..|...+.+
T Consensus 1709 ~~~s~-----l~~~KrklE~~i~~l~~elee~~~~~~~~~Er~kka~~~a~~~~~el~~Eq~~~~~le~~k~~LE~~~kd 1783 (1930)
T KOG0161|consen 1709 AQNSS-----LTAEKRKLEAEIAQLQSELEEEQSELRAAEERAKKAQADAAKLAEELRKEQETSQKLERLKKSLERQVKD 1783 (1930)
T ss_pred hcccc-----hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1112223333444444444444444444444444333222111112 233444555666666777777
Q ss_pred HHHHHHHHHH--HHHHHhchHHHHHhHHHhhhhhccc
Q psy18058 1587 RRSKLIQSEK--AQQYLFDASEAESWMSEQELYMMVE 1621 (2301)
Q Consensus 1587 R~~~L~~a~~--~qqf~~~~~e~~~Wl~e~~~~l~~~ 1621 (2301)
...+|+++-. ...+-..+..+++-+.+.+..+..+
T Consensus 1784 Lq~rL~e~E~~a~~~~k~~i~~Learir~LE~~l~~E 1820 (1930)
T KOG0161|consen 1784 LQLRLDEAEQAALKGGKKQIAKLEARIRELESELEGE 1820 (1930)
T ss_pred HHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHhHh
Confidence 7777766544 2344455666777777776655443
No 87
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=97.08 E-value=0.00044 Score=65.38 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=64.3
Q ss_pred HHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCC----CCCCchhHHHhhHHHHHHHHHh-cccccccCCccc
Q psy18058 61 WVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP----TKGKMRIHCLENVDKALQFLRE-QRVHLENMGSHD 135 (2301)
Q Consensus 61 W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~----~~~~~~~~~~~N~~~al~~~~~-~~~~l~~i~~~d 135 (2301)
|+|..-...++.|.||..||+||+.||.||.-..|..+|.. ..+.+...++.|+.....|..+ .|.+.....++|
T Consensus 1 ~~~~~~~~~~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~ed 80 (85)
T PF11971_consen 1 WVNARCAPYFPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPED 80 (85)
T ss_pred CCCcccCCCCcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHH
Confidence 56665567788999999999999999999999999998753 1233566999999999999987 688887788888
Q ss_pred ccC
Q psy18058 136 IVD 138 (2301)
Q Consensus 136 i~~ 138 (2301)
+..
T Consensus 81 l~~ 83 (85)
T PF11971_consen 81 LLY 83 (85)
T ss_pred Hhc
Confidence 753
No 88
>KOG2059|consensus
Probab=96.99 E-value=0.0011 Score=83.00 Aligned_cols=102 Identities=24% Similarity=0.277 Sum_probs=75.3
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccc-ccC-CCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV-ADD-YSK 2229 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~-~~d-~~k 2229 (2301)
.++|.++|.+.++ ..|.++.+.++.|++||.|++..|+|.|++.. .|...|+|.+-.+.- ..+ -=+
T Consensus 562 ~p~v~k~glm~kr---~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~---------q~~~~Ipl~nI~avEklee~sF~ 629 (800)
T KOG2059|consen 562 EPVVLKEGLMIKR---AQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK---------QPIYTIPLSNIRAVEKLEEKSFK 629 (800)
T ss_pred CCceecccceEec---cccccchhhhhhhheEEEeccceeEEecCCcc---------CcccceeHHHHHHHHHhhhhccC
Confidence 4567777777665 22333446789999999999999999998873 244567776543322 111 125
Q ss_pred CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2230 r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
.+|||++.+.+ +..+|||++-.|...|+.+|.....
T Consensus 630 ~knv~qVV~~d-rtly~Q~~n~vEandWldaL~kvs~ 665 (800)
T KOG2059|consen 630 MKNVFQVVHTD-RTLYVQAKNCVEANDWLDALRKVSC 665 (800)
T ss_pred CCceEEEEecC-cceeEecCCchHHHHHHHHHHHHhc
Confidence 78999999988 5999999999999999999977654
No 89
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.99 E-value=0.0032 Score=62.35 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=70.6
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
.+||.|.+-. .+.-+.+||.|-++.|.|=+-.. ....+.....++|.+..+.-..|-..-+|.|.
T Consensus 5 i~eG~L~K~~----------rk~~~~R~ffLFnD~LvY~~~~~-----~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~ 69 (104)
T cd01218 5 VGEGVLTKMC----------RKKPKQRQFFLFNDILVYGNIVI-----SKKKYNKQHILPLEGVQVESIEDDGIERNGWI 69 (104)
T ss_pred EecCcEEEee----------cCCCceEEEEEecCEEEEEEeec-----CCceeeEeeEEEccceEEEecCCcccccceEE
Confidence 4688885542 34456678999999876632211 11234445678999888766555445689999
Q ss_pred EEeCCCCEEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2236 l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
|.++.. .|.++|+|..+...|+.+|+.||...
T Consensus 70 I~~~~k-Sf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 70 IKTPTK-SFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred EecCCe-EEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 998865 99999999999999999999998754
No 90
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=96.90 E-value=0.0013 Score=65.67 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCCCCCchhHHHhhHHHHHHHHHhccccccc-
Q psy18058 52 SVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRVHLEN- 130 (2301)
Q Consensus 52 ~~q~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~~~~~~~~~~~N~~~al~~~~~~~~~l~~- 130 (2301)
.-|.|..+-||-..|.+.--+-.||.+.|+||++||++++..+|.-+. ....+|.+-.++|+..-|+|++..+|+--.
T Consensus 12 ~~~~kev~~Wie~~l~~k~~ppgdll~~lkdGv~lCril~ea~~~~I~-yKeSkmpFVQmenIs~Fin~~~k~~vpe~el 90 (178)
T COG5199 12 DKQQKEVTLWIETVLGEKFEPPGDLLSLLKDGVRLCRILNEASPLDIK-YKESKMPFVQMENISSFINGLKKLRVPEYEL 90 (178)
T ss_pred HHHHHHHHHHHHHHHHhhhCCcccHHHHHhcchHHHHHHhhcCcccce-ecccCCceeeHHHHHHHHHHHHHhCCCHHHH
Confidence 456778899999988765555679999999999999999998887763 355789999999999999999998865322
Q ss_pred CCccccc-CCcchhhHHHHHHHHh
Q psy18058 131 MGSHDIV-DGNPRLSLGLIWTIIL 153 (2301)
Q Consensus 131 i~~~di~-~g~~~~~Lgliw~ii~ 153 (2301)
..-.|+. ..|+..++--|.++-+
T Consensus 91 FQT~DLFE~kd~~qV~~~l~slSR 114 (178)
T COG5199 91 FQTNDLFEAKDLRQVVICLYSLSR 114 (178)
T ss_pred HHhhhHHhhcCHHHHHHHHHHHHH
Confidence 1112222 2344555555555543
No 91
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.81 E-value=0.0055 Score=61.41 Aligned_cols=91 Identities=26% Similarity=0.368 Sum_probs=66.0
Q ss_pred CCCCceEEEEEeCcEEEEEecCCCCCCCCCc---cCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHH
Q psy18058 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEI---YYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDE 2252 (2301)
Q Consensus 2176 ~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~---~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~ 2252 (2301)
.+.++.+|+.|-++.|.+-|........++. .+.=-..+++.+..+.--+|-.+-+|.|.|.+.++..|.|+|.+.+
T Consensus 17 ~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~e 96 (112)
T cd01261 17 KKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAE 96 (112)
T ss_pred cCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHH
Confidence 4678899999999999888854321111111 1111234677776665555544568999999877888999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy18058 2253 EMNKWVTALSNVCE 2266 (2301)
Q Consensus 2253 ~~~~W~~~i~~~~~ 2266 (2301)
+..+|+.+|..++.
T Consensus 97 eK~~Wm~~l~~~~~ 110 (112)
T cd01261 97 EKNNWMAALISVQT 110 (112)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998875
No 92
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=96.75 E-value=4.1 Score=54.83 Aligned_cols=458 Identities=13% Similarity=0.195 Sum_probs=202.1
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---hhhHH---HHHHHHHHHHHHHHhhhccCCCCChHhHHHHHHH
Q psy18058 713 DRIRGRLQDTMAMWQN-LLDLAAFRRKRLEEAVDF---HQFFA---DAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKK 785 (2301)
Q Consensus 713 ~~I~~~l~~l~~~w~~-L~~~~~~R~~~Le~a~~~---~qf~~---~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~k 785 (2301)
..-....+.....|+. +......-...|.++... ++|+. .++++.+-|...+..+.. -...+..++..
T Consensus 60 Ges~~~f~~w~~~~~~i~~~~~~~ie~~l~~ae~~~~~~~f~~a~~~~~~~~~~l~~~e~~~~~-----i~~~l~~l~~~ 134 (569)
T PRK04778 60 GQSEEKFEEWRQKWDEIVTNSLPDIEEQLFEAEELNDKFRFRKAKHEINEIESLLDLIEEDIEQ-----ILEELQELLES 134 (569)
T ss_pred cccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 3445677888888988 445556666666666543 44554 344555555555444332 12345555555
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHhhhcC-CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q psy18058 786 HKDVTEELKNYASTIEALRNQASQLGD-QDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQW 864 (2301)
Q Consensus 786 h~~l~~el~~~~~~i~~L~~~~~~L~~-~~~~~~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~W 864 (2301)
++.-..++...+.....++...-.-.- -++..+.+..++..+...|.....+... +..++..--+...-.+++.+..-
T Consensus 135 e~~nr~~v~~l~~~y~~~rk~ll~~~~~~G~a~~~le~~l~~~e~~f~~f~~l~~~-Gd~~~A~e~l~~l~~~~~~l~~~ 213 (569)
T PRK04778 135 EEKNREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENLEEEFSQFVELTES-GDYVEAREILDQLEEELAALEQI 213 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666666655554433222 3556778899999999888877665542 22222211122222223333333
Q ss_pred HHHHHHhhcccC--CCCChhHHHHHHHhhhhhHHH---Hh--hhhhhHHHHHHHHHHHhh-cCCCCchHHHHHHHHHHHH
Q psy18058 865 IGEKDRMLATMV--PGKDIEDVEIMKHRYDGFDKE---MN--ANASRVAVVNQLARQLLH-VEHPNSEQIVTRQNQLNHD 936 (2301)
Q Consensus 865 l~e~e~~l~~~~--~~~~~e~~~~l~~~~~~l~~e---l~--~~~~~v~~l~~~a~~L~~-~~~~~~~~I~~~~~~L~~r 936 (2301)
|...-..+.... +|. .+..+..-|+.+..+ +. .....|..+...-...+. -+..+...+....+.+..+
T Consensus 214 ~~~iP~l~~~~~~~~P~---ql~el~~gy~~m~~~gy~~~~~~i~~~i~~l~~~i~~~~~~l~~l~l~~~~~~~~~i~~~ 290 (569)
T PRK04778 214 MEEIPELLKELQTELPD---QLQELKAGYRELVEEGYHLDHLDIEKEIQDLKEQIDENLALLEELDLDEAEEKNEEIQER 290 (569)
T ss_pred HHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 333322221110 111 122222222211111 00 111222222222222110 1112333444444444444
Q ss_pred HHHHHHHHHH----HHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhcccCCC-CCChHHHHHHHHHHHhHHHHHHHHHHH
Q psy18058 937 WAGLREKAEG----KRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSL-EMDLTGIMTLQRRLSGMERDLAAIQAK 1011 (2301)
Q Consensus 937 w~~l~~~~~~----r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~~~~-~~dl~~v~~ll~k~~~le~el~~~~~~ 1011 (2301)
-+.+-+.+.. +..--.....+..|...+.+-..-+..--..+...=.+ ..++..+..+.. ++..+...
T Consensus 291 Id~Lyd~lekE~~A~~~vek~~~~l~~~l~~~~e~~~~l~~Ei~~l~~sY~l~~~e~~~~~~lek-------eL~~Le~~ 363 (569)
T PRK04778 291 IDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQLEK-------QLESLEKQ 363 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHccccCchhHHHHHHHHH-------HHHHHHHH
Confidence 4444444333 32222222233444443333333333222233221111 233444444444 44444444
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy18058 1012 LDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGD-LHRFLRDLDHFQVWLTKTQTDVASEDT 1090 (2301)
Q Consensus 1012 l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~-~~~f~~~~~~l~~Wl~~~e~~l~~~~~ 1090 (2301)
+..+... +...... ...+...+..+......+...-..-...+..... -......+..+..-+..+...+....+
T Consensus 364 ~~~~~~~---i~~~~~~-ysel~e~leel~e~leeie~eq~ei~e~l~~Lrk~E~eAr~kL~~~~~~L~~ikr~l~k~~l 439 (569)
T PRK04778 364 YDEITER---IAEQEIA-YSELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKSNL 439 (569)
T ss_pred HHHHHHH---HHcCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4433222 1111222 4556666666666666666665555555554332 233444455555556667777766666
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHH---H
Q psy18058 1091 PSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQ---L 1167 (2301)
Q Consensus 1091 ~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~---~ 1167 (2301)
|.-+......+ .....+|..... .|-. + +-....|...+.....+...|.....+-.. .
T Consensus 440 pgip~~y~~~~---~~~~~~i~~l~~----------~L~~---g--~VNm~ai~~e~~e~~~~~~~L~~q~~dL~~~a~~ 501 (569)
T PRK04778 440 PGLPEDYLEMF---FEVSDEIEALAE----------ELEE---K--PINMEAVNRLLEEATEDVETLEEETEELVENATL 501 (569)
T ss_pred CCCcHHHHHHH---HHHHHHHHHHHH----------Hhcc---C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554433332 233333333221 2221 1 112233444555555555444443332222 2
Q ss_pred HHHHHHH-HHHHHhHHHHHHHHHHHhhhhccCCCCCCHHHHH
Q psy18058 1168 LSQSLNL-QMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVE 1208 (2301)
Q Consensus 1168 L~~~l~l-q~f~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e 1208 (2301)
++...+. .+|......+..-+..++......+...+++.+.
T Consensus 502 lE~~Iqy~nRfr~~~~~V~~~f~~Ae~lF~~~~Y~~al~~~~ 543 (569)
T PRK04778 502 TEQLIQYANRYRSDNEEVAEALNEAERLFREYDYKAALEIIA 543 (569)
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 2333322 2355566666666666665554444444444443
No 93
>PRK03918 chromosome segregation protein; Provisional
Probab=96.65 E-value=7.3 Score=56.31 Aligned_cols=18 Identities=6% Similarity=-0.003 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy18058 830 RYKELLELAKLRKQRLLD 847 (2301)
Q Consensus 830 ~~~~L~~~~~~R~~~Le~ 847 (2301)
.|..+...+......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~ 176 (880)
T PRK03918 159 DYENAYKNLGEVIKEIKR 176 (880)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555444444443
No 94
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=96.46 E-value=0.0064 Score=80.54 Aligned_cols=102 Identities=16% Similarity=0.231 Sum_probs=67.7
Q ss_pred CccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccc-cCCCCCC
Q psy18058 2153 DADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA-DDYSKKK 2231 (2301)
Q Consensus 2153 ~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~-~d~~kr~ 2231 (2301)
..+..+||+.+- .+...|+++|+.+.++.+.......+.. .+....+....++.++ |.++ .+-.+++
T Consensus 375 sDv~~~G~l~k~---------~~~~~wk~ry~~l~~~~l~~~~~~~~~~--~~~~~~~~~l~~~~~v-~pv~~~~~~~~~ 442 (478)
T PTZ00267 375 SDVTHGGYLYKY---------SSDMRWKKRYFYIGNGQLRISLSENPEN--DGVAPKSVNLETVNDV-FPVPEVYSQKHP 442 (478)
T ss_pred CCcccceEEecc---------CCCcchhhheEEecCCceEEEecccccc--CCCCCccccHHHhccc-ccccHHhcCCCC
Confidence 345678888543 1235699999999987777653322111 1111122222233333 3332 2335689
Q ss_pred ceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2232 ~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
|+|.+.+.+|..++|.|+|++++..|+.+|+.++.
T Consensus 443 ~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 477 (478)
T PTZ00267 443 NQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRACG 477 (478)
T ss_pred ceEEEEecCCcEEEEecCChHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999865
No 95
>KOG3531|consensus
Probab=96.43 E-value=0.0014 Score=83.07 Aligned_cols=92 Identities=25% Similarity=0.544 Sum_probs=74.0
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc--CCCCCCce
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD--DYSKKKHV 2233 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~--d~~kr~~v 2233 (2301)
...|+|-||..-. ..|.+.|+|....+|+|||..+.. .+..+++|-|-.+.++. |-.-|.+|
T Consensus 925 qLsg~Llrkfkns--------sgwqkLwvvft~fcl~fyKS~qD~--------~~laslPlLgysvs~P~~~d~i~K~~v 988 (1036)
T KOG3531|consen 925 QLSGYLLRKFKNS--------SGWQKLWVVFTNFCLFFYKSHQDS--------EPLASLPLLGYSVSIPAEPDPIQKDYV 988 (1036)
T ss_pred hhhHHHHHHhhcc--------ccceeeeeeecceeeEeecccccc--------cccccccccccccCCCCCCCCcchhhe
Confidence 3568998884332 469999999999999999988732 45556778887777754 55567899
Q ss_pred EEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2234 FRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2234 f~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|+|...+ ..|+|.|++.-..+.|+..|..+
T Consensus 989 fkl~fk~-hvyffraes~yt~~rw~evi~~a 1018 (1036)
T KOG3531|consen 989 FKLKFKS-HVYFFRAESYYTFERWMEVITDA 1018 (1036)
T ss_pred eeeehhh-hHHHHhhhhhhhhhhHHHHhhcC
Confidence 9999775 59999999999999999999764
No 96
>PRK02224 chromosome segregation protein; Provisional
Probab=96.40 E-value=9.9 Score=54.89 Aligned_cols=73 Identities=14% Similarity=0.212 Sum_probs=33.5
Q ss_pred hhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-hHHHHHhhHHHH
Q psy18058 890 RYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAH-GVQTFHIECRET 967 (2301)
Q Consensus 890 ~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~-~~~~f~~~~~~l 967 (2301)
..+.+..++......+..++...+.+-.. ......+..+..+.+.+...+......++... .+..+..++.++
T Consensus 476 ~~~~~~~~~~~le~~l~~~~~~~e~l~~~-----~~~~~~l~~l~~~~~~l~~~~~~~~e~le~~~~~~~~l~~e~~~l 549 (880)
T PRK02224 476 RVEELEAELEDLEEEVEEVEERLERAEDL-----VEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAEL 549 (880)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33344444455555555555444433211 11234445555555555555555555555332 234444444444
No 97
>KOG3640|consensus
Probab=96.39 E-value=0.0045 Score=79.86 Aligned_cols=106 Identities=19% Similarity=0.327 Sum_probs=76.7
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccc---c-cCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV---A-DDY 2227 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~---~-~d~ 2227 (2301)
+..|.--|||+.=.... +...|.+|||+|.|+.+.|+|-.-.-. .-.|.+.|+|..|+-.. + .|+
T Consensus 987 ~idVEYrGFLtmfed~s------gfGaWhRyWc~L~gg~I~fWk~PdDEk-----rK~Pig~IDLt~CTsq~ie~a~rdi 1055 (1116)
T KOG3640|consen 987 AIDVEYRGFLTMFEDGS------GFGAWHRYWCALHGGEIKFWKYPDDEK-----RKVPIGQIDLTKCTSQSIEEARRDI 1055 (1116)
T ss_pred ccceeeeeeeeeeeccC------CCchhhhhhHHhcCCeeeeecCcchhc-----ccCcceeeehhhhhccccccchhhh
Confidence 45566678886654322 345699999999999999999654211 22577899998776432 3 377
Q ss_pred CCCCceEEEE----eCC-----C----CEEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2228 SKKKHVFRVK----ADN-----G----AEYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2228 ~kr~~vf~l~----~~~-----g----~~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
.-|+|.|-|. +-+ + .-.++.|++-+++..|+.+||.+....
T Consensus 1056 car~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~L 1109 (1116)
T KOG3640|consen 1056 CARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQL 1109 (1116)
T ss_pred ccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8899999987 211 1 257899999999999999999876543
No 98
>KOG3751|consensus
Probab=96.33 E-value=0.006 Score=73.90 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=60.2
Q ss_pred CccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCC---
Q psy18058 2153 DADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK--- 2229 (2301)
Q Consensus 2153 ~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~k--- 2229 (2301)
..+.++|||+-| ..|| ++||++||||+.+.|||+...++...- +-...-++++..+-......|
T Consensus 315 ~~pei~GfL~~K----~dgk----KsWKk~yf~LR~SGLYys~K~tsk~~r-----~Lq~l~~~~~snVYt~i~~rKkyk 381 (622)
T KOG3751|consen 315 SPPEIQGFLYLK----EDGK----KSWKKHYFVLRRSGLYYSTKGTSKEPR-----HLQCLADLHSSNVYTGIGGRKKYK 381 (622)
T ss_pred CCccccceeeec----cccc----ccceeEEEEEecCcceEccCCCCCCch-----hhHHHHhcccCceEEeecchhccC
Confidence 445799999988 4555 799999999999999998765522110 111112222222221111111
Q ss_pred --CCceEEEEe---CCCC--EEEEccCCHHHHHHHHHHHHH
Q psy18058 2230 --KKHVFRVKA---DNGA--EYLFQAKNDEEMNKWVTALSN 2263 (2301)
Q Consensus 2230 --r~~vf~l~~---~~g~--~~lfqa~~~~~~~~W~~~i~~ 2263 (2301)
-.+.|.++. .++. -=+|.|+|+-...-|+.||.-
T Consensus 382 sPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl 422 (622)
T KOG3751|consen 382 SPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRL 422 (622)
T ss_pred CCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHH
Confidence 136676652 2222 346899999999999999954
No 99
>PF13514 AAA_27: AAA domain
Probab=96.25 E-value=13 Score=54.77 Aligned_cols=313 Identities=17% Similarity=0.218 Sum_probs=141.8
Q ss_pred hHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy18058 778 NVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSE 857 (2301)
Q Consensus 778 ~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e 857 (2301)
.+-.+++.++.+..+|.........-...-..+ ......+..+......+ ..+...|+.....+..+.+
T Consensus 151 ~in~~l~~l~e~~~~l~~~~~~~~~y~~l~~~~-------~~~~~~~~~l~~~~~~l----~~~~~~ler~~~~~p~~~~ 219 (1111)
T PF13514_consen 151 EINQALKELKELERELREAEVRAAEYQELQQAL-------EEAEEELEELRAELKEL----RAELRRLERLRRAWPLLAE 219 (1111)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhHHHHH
Confidence 456667777777777765544433332222211 11233333333333222 2334445555566777777
Q ss_pred HhHHHHHHHHHHHhhcccC-CCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHH
Q psy18058 858 ADGVQQWIGEKDRMLATMV-PGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHD 936 (2301)
Q Consensus 858 ~~~l~~Wl~e~e~~l~~~~-~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~r 936 (2301)
...+...|...... +. |+.....+..+..+...+...+......+..+......+.-. +..-.....+..|..+
T Consensus 220 ~~~l~~~l~~l~~~---~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~--~~ll~~~~~I~~L~~~ 294 (1111)
T PF13514_consen 220 LQQLEAELAELGEV---PDFPEDGAERLEQLEEELAEAQAQLERLQEELAQLEEELDALPVD--EELLAHAAEIEALEEQ 294 (1111)
T ss_pred HHHHHHHHHhcCCc---CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHhhHHHHHHHHHH
Confidence 76666665443211 12 234555666666677777777777777777766655444211 1111122222333322
Q ss_pred HHHHHHHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhc---------ccCCCCCChHHHHHHHHHHHhHHHHHHH
Q psy18058 937 WAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQ---------STDSLEMDLTGIMTLQRRLSGMERDLAA 1007 (2301)
Q Consensus 937 w~~l~~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~---------~~~~~~~dl~~v~~ll~k~~~le~el~~ 1007 (2301)
...+.. ....+.....++......+......|. ...+.......+..+.+.+..+...+..
T Consensus 295 ~~~~~~----------~~~dl~~~~~e~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~~~~~ 364 (1111)
T PF13514_consen 295 RGEYRK----------ARQDLPRLEAELAELEAELRALLAQLGPDWDEEDLEALDPSLAARERIRELLQEREQLEQALAQ 364 (1111)
T ss_pred HHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111 112223333333333333443333333 1122223345666777777777777777
Q ss_pred HHHHHHHHHHHHHHHhhc----C-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1008 IQAKLDSLEAEAVAIEKE----H-PEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQ 1082 (2301)
Q Consensus 1008 ~~~~l~~L~~~a~~L~~~----~-p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e 1082 (2301)
....+......-..+... . +.....+...+.......+ +..........+.. .-......+..|-.|-..+.
T Consensus 365 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~l~~al~~~~~~~d-~~~~~~~~~~~~~~--~~~~l~~~l~~L~~w~~~~~ 441 (1111)
T PF13514_consen 365 ARRELEEAERELEQLQAELAALPAPPDPEALRAALEAAQRLGD-LEARLQEAEQALEA--AERRLAAALAALGPWSGDLD 441 (1111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcccCCChHHHHHHHHHHhccc-HHHHHHHHHHHHHH--HHHHHHHHHHhcCCCCCChH
Confidence 777666665554444221 1 1122223444443333221 11111111111111 12334444555555655543
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHH
Q psy18058 1083 TDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKM 1121 (2301)
Q Consensus 1083 ~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l 1121 (2301)
.- ....+| +.+.+......+.++...+......+..+
T Consensus 442 ~l-~~~~~P-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1111)
T PF13514_consen 442 AL-AALPLP-SRETVEAFRAEFEELERQLRRARDRLEEL 478 (1111)
T ss_pred HH-hccCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 333333 45556666666655555555444444333
No 100
>KOG4674|consensus
Probab=96.18 E-value=13 Score=54.26 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhHhHHHHHHHHH
Q psy18058 821 LERLASIEFRYKELLELAKLRKQRLLDAL-SLYKLFSEADGVQQWIGEK 868 (2301)
Q Consensus 821 ~~~l~~L~~~~~~L~~~~~~R~~~Le~al-~l~~~~~e~~~l~~Wl~e~ 868 (2301)
...+..+...|..+.+........++... .+..|..++.....-|.+.
T Consensus 383 ~~sLtk~ys~~~~~qqqle~~~lele~~~~~l~s~~eev~~~~p~lk~q 431 (1822)
T KOG4674|consen 383 GSSLTKLYSKYSKLQQQLESLKLELERLQNILSSFKEEVKQKAPILKEQ 431 (1822)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 35677777888888888877777777543 3445555555544444444
No 101
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=96.02 E-value=9.8 Score=51.29 Aligned_cols=410 Identities=16% Similarity=0.249 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHH---HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q psy18058 1033 IRERIKQIRIIWEQ-LTQMLKERDAKLEEAGDL---HRFL---RDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQ 1105 (2301)
Q Consensus 1033 i~~~l~~L~~~w~~-L~~~~~~R~~~L~~a~~~---~~f~---~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~ 1105 (2301)
...........|+. +...+.+-...|.++... .+|. ..+.++..-|..++..+... ..++..++..++
T Consensus 62 s~~~f~~w~~~~~~i~~~~~~~ie~~l~~ae~~~~~~~f~~a~~~~~~~~~~l~~~e~~~~~i-----~~~l~~l~~~e~ 136 (569)
T PRK04778 62 SEEKFEEWRQKWDEIVTNSLPDIEEQLFEAEELNDKFRFRKAKHEINEIESLLDLIEEDIEQI-----LEELQELLESEE 136 (569)
T ss_pred cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence 45678888899998 555556666666666442 2343 44566666666666665432 456777888888
Q ss_pred HHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy18058 1106 AIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAE 1185 (2301)
Q Consensus 1106 ~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~ 1185 (2301)
.-..+|......|..+....-.-. .. -.+....|..+|..+...+........ -...++..-.+......+..+.
T Consensus 137 ~nr~~v~~l~~~y~~~rk~ll~~~---~~-~G~a~~~le~~l~~~e~~f~~f~~l~~-~Gd~~~A~e~l~~l~~~~~~l~ 211 (569)
T PRK04778 137 KNREEVEQLKDLYRELRKSLLANR---FS-FGPALDELEKQLENLEEEFSQFVELTE-SGDYVEAREILDQLEEELAALE 211 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---cc-ccchHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHH
Confidence 888899998888888876533222 11 124566788888888887776654322 1222222222222333333333
Q ss_pred HHHHHHhhhh--ccCCCCCCHHHHHHHHHH---------HHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHHH
Q psy18058 1186 VLLSQQEHVL--SKDETPVNLEQVENLIKR---------HEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKAD 1254 (2301)
Q Consensus 1186 ~wL~~~E~~L--~~~~~~~~l~~~e~~l~k---------~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~ 1254 (2301)
.-|...=..+ ....+|+.++++..-.++ |-.+..++......+......-..| .-+.+...++
T Consensus 212 ~~~~~iP~l~~~~~~~~P~ql~el~~gy~~m~~~gy~~~~~~i~~~i~~l~~~i~~~~~~l~~l------~l~~~~~~~~ 285 (569)
T PRK04778 212 QIMEEIPELLKELQTELPDQLQELKAGYRELVEEGYHLDHLDIEKEIQDLKEQIDENLALLEEL------DLDEAEEKNE 285 (569)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHhc------ChHHHHHHHH
Confidence 3333221111 111233333333322222 1123333333333333322222221 1111222222
Q ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHhH
Q psy18058 1255 NIN----DRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNK 1330 (2301)
Q Consensus 1255 ~l~----~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~~ 1330 (2301)
.+. .-++.+..-...+...-...-.+..|...+.+-..=+..-... ...+|.=. +..+.....+..++....
T Consensus 286 ~i~~~Id~Lyd~lekE~~A~~~vek~~~~l~~~l~~~~e~~~~l~~Ei~~-l~~sY~l~---~~e~~~~~~lekeL~~Le 361 (569)
T PRK04778 286 EIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDR-VKQSYTLN---ESELESVRQLEKQLESLE 361 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HHHccccC---chhHHHHHHHHHHHHHHH
Confidence 222 2222222222222222222222222222222211111110000 00111100 112333344455555544
Q ss_pred HHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHhcHHHHHHhHHHHHHhhccC
Q psy18058 1331 DRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNR-EVLIHQTCDDIDSWMNELEKQIENE 1409 (2301)
Q Consensus 1331 ~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~-~~~f~~~~~~l~~WL~~~E~~L~~~ 1409 (2301)
..+..+... +......-..|...+.++...-..+...-..-...+..... .......+..+..-|..+...+...
T Consensus 362 ~~~~~~~~~----i~~~~~~ysel~e~leel~e~leeie~eq~ei~e~l~~Lrk~E~eAr~kL~~~~~~L~~ikr~l~k~ 437 (569)
T PRK04778 362 KQYDEITER----IAEQEIAYSELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKS 437 (569)
T ss_pred HHHHHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 444433222 22233335667778887777777777776666666665532 2334455666666677777777654
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHH
Q psy18058 1410 DTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLA 1480 (2301)
Q Consensus 1410 ~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~ 1480 (2301)
..++-+..... .+......+..| ...|.. ++.+...|...+..+..++..|.....+
T Consensus 438 ~lpgip~~y~~----------~~~~~~~~i~~l---~~~L~~-g~VNm~ai~~e~~e~~~~~~~L~~q~~d 494 (569)
T PRK04778 438 NLPGLPEDYLE----------MFFEVSDEIEAL---AEELEE-KPINMEAVNRLLEEATEDVETLEEETEE 494 (569)
T ss_pred CCCCCcHHHHH----------HHHHHHHHHHHH---HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433222 222222223332 234444 7778888888888899898887766554
No 102
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.91 E-value=0.014 Score=77.24 Aligned_cols=50 Identities=30% Similarity=0.520 Sum_probs=44.2
Q ss_pred CcccccccCCCC--CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2218 GGSAQVADDYSK--KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2218 ~a~~~~~~d~~k--r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
...|.++.-|++ .+|||-|.+.+|+.|.|||.+++++..||.+|+.++..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (496)
T PTZ00283 440 EDVFPVPSKYTGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLGI 491 (496)
T ss_pred cccccccHHhhCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcCC
Confidence 455666677777 89999999999999999999999999999999998763
No 103
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.79 E-value=0.03 Score=54.91 Aligned_cols=76 Identities=14% Similarity=0.268 Sum_probs=49.0
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc-CC----CCCC
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD-DY----SKKK 2231 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~-d~----~kr~ 2231 (2301)
+|||+.-=- .....||+.|.+|....|.+|++.... ++-..|+|..-....++ +. ...+
T Consensus 2 kEGWmVHyT--------~~d~~rKRhYWrLDsK~Itlf~~e~~s--------kyyKeIPLsEIl~V~~~~~~~~~~~~~~ 65 (117)
T cd01239 2 KEGWMVHYT--------SSDNRRKKHYWRLDSKAITLYQEESGS--------RYYKEIPLAEILSVSSNNGDSVLAKHPP 65 (117)
T ss_pred ccceEEEEe--------cCccceeeeEEEecCCeEEEEEcCCCC--------eeeEEeehHHheEEeccCCCcCCCCCCC
Confidence 688875431 124779999999999999999997721 22224444432222211 11 3578
Q ss_pred ceEEEEeCCCCEEEEccC
Q psy18058 2232 HVFRVKADNGAEYLFQAK 2249 (2301)
Q Consensus 2232 ~vf~l~~~~g~~~lfqa~ 2249 (2301)
|+|.|+|++ ..|+.+.+
T Consensus 66 hcFEi~T~~-~vY~VG~~ 82 (117)
T cd01239 66 HCFEIRTTT-NVYFVGGE 82 (117)
T ss_pred cEEEEEecC-EEEEeccc
Confidence 999999964 58888664
No 104
>PRK03918 chromosome segregation protein; Provisional
Probab=95.72 E-value=19 Score=52.18 Aligned_cols=20 Identities=10% Similarity=0.323 Sum_probs=8.2
Q ss_pred HhHHHHHHHHHHHHHHHHHH
Q psy18058 999 SGMERDLAAIQAKLDSLEAE 1018 (2301)
Q Consensus 999 ~~le~el~~~~~~l~~L~~~ 1018 (2301)
..+...+..+...+..|...
T Consensus 408 ~~l~~~~~~~~~~i~eL~~~ 427 (880)
T PRK03918 408 SKITARIGELKKEIKELKKA 427 (880)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444433
No 105
>KOG1090|consensus
Probab=95.47 E-value=0.012 Score=75.64 Aligned_cols=92 Identities=25% Similarity=0.357 Sum_probs=72.3
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEe--CcEEEEEecCCCCCCCCCccCCCCcceeccCc--ccccccCCCCCCc
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLR--GTLLYFYKDQKSAKSSPEIYYKNETPFELRGG--SAQVADDYSKKKH 2232 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~--~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a--~~~~~~d~~kr~~ 2232 (2301)
-+|+|+++ |.+ .+.|+.+||||. .+.|+||.+.-. .+|.+.|+|... ...+.+.-..+|-
T Consensus 1636 ~eG~LyKr-----GA~---lK~Wk~RwFVLd~~khqlrYYd~~ed--------t~pkG~IdLaevesv~~~~~k~vdekg 1699 (1732)
T KOG1090|consen 1636 PEGYLYKR-----GAK---LKLWKPRWFVLDPDKHQLRYYDDFED--------TKPKGCIDLAEVESVALIGPKTVDEKG 1699 (1732)
T ss_pred cccchhhc-----chh---hcccccceeEecCCccceeeeccccc--------ccccchhhhhhhhhhcccCccccCccc
Confidence 39999887 433 689999999998 588999988762 245667777632 2333444467889
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
.|-|.|.+. .|-|.|.|-.....|+..|+.++
T Consensus 1700 ffdlktt~r-vynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1700 FFDLKTTNR-VYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred eeeeehhhH-HHHHHhccchHHHHHHHHHHHhh
Confidence 999998865 99999999999999999999865
No 106
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.29 E-value=0.074 Score=54.20 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=54.3
Q ss_pred CCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccc---cC--CCCCCceEEEEeC---CC--CEEEEc
Q psy18058 2178 SWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA---DD--YSKKKHVFRVKAD---NG--AEYLFQ 2247 (2301)
Q Consensus 2178 ~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~---~d--~~kr~~vf~l~~~---~g--~~~lfq 2247 (2301)
+=+.+|+.|-++.|.+-|.+... .-....+.+-..+.+.+...... .+ ....+|+|.|++- +| .+++++
T Consensus 26 ~~~~vylfLFnDlLl~tkkK~~~-~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~ 104 (125)
T cd01221 26 KARTIYLFLFNDLLLITKKKLGS-TFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLS 104 (125)
T ss_pred cCCcEEEEEecceEEEEEecCCC-eEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEE
Confidence 34679999999999888755411 11222344444555554322211 11 1145899999843 34 469999
Q ss_pred cCCHHHHHHHHHHHH
Q psy18058 2248 AKNDEEMNKWVTALS 2262 (2301)
Q Consensus 2248 a~~~~~~~~W~~~i~ 2262 (2301)
|+|+.|+..||.||.
T Consensus 105 a~S~sdr~rWi~Al~ 119 (125)
T cd01221 105 ADSQSDRERWLSALA 119 (125)
T ss_pred CCCHHHHHHHHHhcC
Confidence 999999999999983
No 107
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=95.13 E-value=17 Score=49.38 Aligned_cols=278 Identities=13% Similarity=0.211 Sum_probs=140.3
Q ss_pred HHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Q psy18058 643 LYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDT 722 (2301)
Q Consensus 643 f~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~l 722 (2301)
....+..+..|+.+....+... -.++..|...+.+...+ |+.-+...+++....+... .+.+..+.+
T Consensus 34 ~~~~~~qi~~Wi~k~k~~l~~L--~~~l~~ID~ai~~~l~l----------Ie~~v~~ie~~q~r~di~~-~~~dl~e~v 100 (683)
T PF08580_consen 34 LSGAAEQILDWIQKAKDVLYGL--REGLEEIDSAISRFLDL----------IEVYVSAIEDLQLREDIAN-SLFDLIEEV 100 (683)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHH----------HHhhccccccccccccccc-cHHHHHHHH
Confidence 3446677788888887776642 22333333333332222 1111111111111011111 233344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHHHHh-hhcc-CCCCChHhHHHHHHHh------
Q psy18058 723 MAMWQNLLDLAAFRRKRLEEAVDFHQFFAD--------AVDVDIWMLDTVRL-VSSE-DVGRDEANVQSLLKKH------ 786 (2301)
Q Consensus 723 ~~~w~~L~~~~~~R~~~Le~a~~~~qf~~~--------~~el~~Wl~e~~~~-l~~~-~~g~d~~~~~~ll~kh------ 786 (2301)
.+.-..++..+..-+..++-|+.+...+.+ ++++..++-+.+.. ..+. ..+.+...++..+.+.
T Consensus 101 sqm~~~vK~~L~~vK~qveiAmE~~EL~~~vlg~l~~EIe~~~~~vfemeE~R~~Sp~~~~lp~~~Le~Ive~~~~~~~~ 180 (683)
T PF08580_consen 101 SQMELDVKKTLISVKKQVEIAMEWEELWNDVLGDLDNEIEECIRLVFEMEEKRHSSPVRHGLPIFELETIVEEMPSSTNS 180 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccCCCcccHHHHHHhccccCCC
Confidence 444447888888888888888887665443 55555555555432 2222 1223333444443333
Q ss_pred --------------HHHHHHHHHhHHHHHHHHHHH-------hhhcCC-----CCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy18058 787 --------------KDVTEELKNYASTIEALRNQA-------SQLGDQ-----DKESPEVLERLASIEFRYKELLELAKL 840 (2301)
Q Consensus 787 --------------~~l~~el~~~~~~i~~L~~~~-------~~L~~~-----~~~~~~v~~~l~~L~~~~~~L~~~~~~ 840 (2301)
+.+..++-+....|.-|..-- ..+... ......+..+-..|...|..|...++.
T Consensus 181 ~~~~~~lPtF~~~Desl~~~ll~L~arm~PLraSLdfLP~Ri~~F~~ra~~~fp~a~e~L~~r~~~L~~k~~~L~~e~~~ 260 (683)
T PF08580_consen 181 SNKRFSLPTFSPQDESLYSSLLALFARMQPLRASLDFLPMRIEEFQSRAESIFPSACEELEDRYERLEKKWKKLEKEAES 260 (683)
T ss_pred CcCCcCCCCCCcHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222333333333333222 222110 123456888999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcccC----CCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHh
Q psy18058 841 RKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMV----PGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLL 916 (2301)
Q Consensus 841 R~~~Le~al~l~~~~~e~~~l~~Wl~e~e~~l~~~~----~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~ 916 (2301)
-+..|-+..=..-|..-..++..-++..+..+.... .|.....-..+-++++.+..-....-+-|-. .....++
T Consensus 261 LK~ELiedRW~~vFr~l~~q~~~m~esver~~~kl~~~~~~~~~~~~~~~l~~~i~s~~~k~~~~~~~I~k--a~~~sIi 338 (683)
T PF08580_consen 261 LKKELIEDRWNIVFRNLGRQAQKMCESVERSLSKLQEAIDSGIHLDNPSKLSKQIESKEKKKSHYFPAIYK--ARVLSII 338 (683)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHhccHHHHHH--HHHHHhh
Confidence 888887754333333333777777777776654321 2333333344445555554444333333310 1111233
Q ss_pred hcCCCCchHHHHHHH-HHHHHHHHHH
Q psy18058 917 HVEHPNSEQIVTRQN-QLNHDWAGLR 941 (2301)
Q Consensus 917 ~~~~~~~~~I~~~~~-~L~~rw~~l~ 941 (2301)
. . .|..+.. +|..||..|+
T Consensus 339 ~-----~-gv~~r~n~~L~~rW~~L~ 358 (683)
T PF08580_consen 339 D-----K-GVADRLNADLAQRWLELK 358 (683)
T ss_pred h-----h-hHHHHhhHHHHHHHHHHH
Confidence 1 1 2677777 9999999997
No 108
>KOG4674|consensus
Probab=95.12 E-value=30 Score=50.86 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=44.5
Q ss_pred CChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCc----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy18058 879 KDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNS----EQIVTRQNQLNHDWAGLREKAEGKRDELNSA 954 (2301)
Q Consensus 879 ~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~----~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a 954 (2301)
.+-.-+...+-.|.++..-......-+..|..+|..+-....+.. ..++.....++.+...|...+......+++.
T Consensus 519 ~S~~iIse~Lv~F~nI~eLqekN~eLL~~vR~Lae~lE~~E~~~~~~~~~~~k~~~~~a~e~i~~L~~~l~e~~~~i~sL 598 (1822)
T KOG4674|consen 519 DSEEIISERLVEFSNINELQEKNVELLNAVRELAEKLEAAEKTQDKTLQNILKETINEASEKIAELEKELEEQEQRIESL 598 (1822)
T ss_pred cHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666777888777777777777788888888765443321 1234444555555555555555555554444
Q ss_pred H
Q psy18058 955 H 955 (2301)
Q Consensus 955 ~ 955 (2301)
+
T Consensus 599 l 599 (1822)
T KOG4674|consen 599 L 599 (1822)
T ss_pred H
Confidence 3
No 109
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=95.03 E-value=0.026 Score=60.95 Aligned_cols=97 Identities=16% Similarity=0.310 Sum_probs=70.7
Q ss_pred HHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCC--CCCCCCchhHHHhhHHHH-HHHHHhcccccccCCccc
Q psy18058 59 QKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP--RPTKGKMRIHCLENVDKA-LQFLREQRVHLENMGSHD 135 (2301)
Q Consensus 59 ~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~--~~~~~~~~~~~~~N~~~a-l~~~~~~~~~l~~i~~~d 135 (2301)
.+|+|+ ......+.++..||+||+.++.++....|..+. ....+.+.-.++.|...- -.+++..|+++..-..++
T Consensus 2 ~~WL~~--l~ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl~kl~~~l~~~~i~~ 79 (158)
T PF06294_consen 2 LKWLQS--LDLSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVLKKLGIKLDKEDIEG 79 (158)
T ss_dssp HHHHHH--S--S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTTGGGT----HHHHHH
T ss_pred hHHHhc--CCCCCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 479999 334456888999999999999999999998754 334566778999999998 999999999988777889
Q ss_pred ccCCcchhhHHHHHHHHhhhhh
Q psy18058 136 IVDGNPRLSLGLIWTIILRFQI 157 (2301)
Q Consensus 136 i~~g~~~~~Lgliw~ii~~~~~ 157 (2301)
|+.|.+-.+-.|+..|+..+.-
T Consensus 80 i~~~~~Gaae~lL~~L~~~l~~ 101 (158)
T PF06294_consen 80 IINCKPGAAESLLYQLYTKLTK 101 (158)
T ss_dssp HHTT-TTTTHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999977743
No 110
>PLN02866 phospholipase D
Probab=95.01 E-value=0.14 Score=69.32 Aligned_cols=113 Identities=19% Similarity=0.323 Sum_probs=70.0
Q ss_pred CccceEeEecceeeecc-C-CccC----------CCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceec-cCc
Q psy18058 2153 DADHMEGTLVRKHEWEA-I-AKRA----------SNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL-RGG 2219 (2301)
Q Consensus 2153 ~~~~~eG~L~rK~~~~~-~-~k~~----------~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l-~~a 2219 (2301)
++-.+|||+.+|+--.. | +.+. .+-+|.++|+||+.+.|.|.++.....-.-..-+...+.+.- .+.
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~~ 259 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLPASNGNGEG 259 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEecccccccCCCc
Confidence 45679999998853322 2 1111 235799999999999999997776321100000000000000 012
Q ss_pred ccccccCCCCC---CceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2220 SAQVADDYSKK---KHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2220 ~~~~~~d~~kr---~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
.+.++.+++.+ +|-|+|...+ +...|-|.|...+..|+.+|+.+..
T Consensus 260 ~~~~~~~~k~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~ai~~~~~ 308 (1068)
T PLN02866 260 QISLAKEIKERNPLRFGFKVTCGN-RSIRLRTKSSAKVKDWVAAINDAGL 308 (1068)
T ss_pred ceeecccccccCCCcceEEEecCc-eEEEEEECCHHHHHHHHHHHHHHHh
Confidence 22334444444 6899987664 5799999999999999999999864
No 111
>PRK02224 chromosome segregation protein; Provisional
Probab=95.00 E-value=29 Score=50.09 Aligned_cols=57 Identities=21% Similarity=0.337 Sum_probs=30.3
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 789 VTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDAL 849 (2301)
Q Consensus 789 l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al 849 (2301)
+..++......++.+......+-. .......+..+..+++.+......+...+++..
T Consensus 480 ~~~~~~~le~~l~~~~~~~e~l~~----~~~~~~~l~~l~~~~~~l~~~~~~~~e~le~~~ 536 (880)
T PRK02224 480 LEAELEDLEEEVEEVEERLERAED----LVEAEDRIERLEERREDLEELIAERRETIEEKR 536 (880)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 333444444444444443333211 112355666777777777777766666666554
No 112
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=94.93 E-value=22 Score=48.31 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=78.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCHHHHHHHH
Q psy18058 1026 HPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT----PSSLADAEKLL 1101 (2301)
Q Consensus 1026 ~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~----~~~~~~~e~ll 1101 (2301)
-|.....|..+...|..+|..|...+..-+..|-+..-..-|....+++..-++.++..+..-.. +.....-..+.
T Consensus 233 fp~a~e~L~~r~~~L~~k~~~L~~e~~~LK~ELiedRW~~vFr~l~~q~~~m~esver~~~kl~~~~~~~~~~~~~~~l~ 312 (683)
T PF08580_consen 233 FPSACEELEDRYERLEKKWKKLEKEAESLKKELIEDRWNIVFRNLGRQAQKMCESVERSLSKLQEAIDSGIHLDNPSKLS 312 (683)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHH
Confidence 37778889999999999999999999888888877666667777777777777777766532211 22223333344
Q ss_pred HHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHH-HHHHhHHHHH
Q psy18058 1102 NQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLK-ALRDGWEELH 1158 (2301)
Q Consensus 1102 ~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~-~L~~~w~~L~ 1158 (2301)
++.+.+..-+..+-+.+.. +....++. .| |.+++. +|..+|..|.
T Consensus 313 ~~i~s~~~k~~~~~~~I~k--a~~~sIi~--~g--------v~~r~n~~L~~rW~~L~ 358 (683)
T PF08580_consen 313 KQIESKEKKKSHYFPAIYK--ARVLSIID--KG--------VADRLNADLAQRWLELK 358 (683)
T ss_pred HHHHHHHHHHhccHHHHHH--HHHHHhhh--hh--------HHHHhhHHHHHHHHHHH
Confidence 4444444444444333311 22233553 11 777787 9999999996
No 113
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.71 E-value=0.11 Score=50.87 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=64.4
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVT 2259 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~ 2259 (2301)
..+|+||-.+.|+|...... ..+.. -.+-++|.|..+....|-.+.+|+|.+.-+.-...++-|.|..|+..|+.
T Consensus 29 ~eRyLvLFp~~LlilS~s~r---~sGf~--yqGkLPL~~i~v~~lEd~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~ 103 (111)
T cd01225 29 RERYLVLFPNVLLMLSASPR---MSGFI--YQGKLPLTGIIVTRLEDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVE 103 (111)
T ss_pred ceeEEEEcCceEEEEEcCCC---ccceE--EeeeecccccEEechHhccCccceEEEeccCcCcEEEEeCCHHHHHHHHH
Confidence 46789999999998875331 12333 34578999999988777778899999997776789999999999999999
Q ss_pred HHHHHH
Q psy18058 2260 ALSNVC 2265 (2301)
Q Consensus 2260 ~i~~~~ 2265 (2301)
.++..+
T Consensus 104 hL~~~~ 109 (111)
T cd01225 104 LLNANN 109 (111)
T ss_pred HHHhhc
Confidence 998743
No 114
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=94.69 E-value=0.02 Score=61.87 Aligned_cols=92 Identities=25% Similarity=0.414 Sum_probs=56.7
Q ss_pred HHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccCccC----HHHHHHHH-HHHHHHhcCCcccccc
Q psy18058 177 LLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSN----AIYNLNNA-FTVAEDKLGLTKLLDA 251 (2301)
Q Consensus 177 ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~~----~~~n~~~a-~~~a~~~lgi~~~l~~ 251 (2301)
|+.|++...- .+++.||..+|+||..++.|+++|.|..||+..+.+.+ ...|...- ..+. +++||+ +++
T Consensus 1 l~~WL~~l~l---s~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl-~kl~~~--l~~ 74 (158)
T PF06294_consen 1 LLKWLQSLDL---SRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVL-KKLGIK--LDK 74 (158)
T ss_dssp HHHHHHHS-----S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTT-GGGT------H
T ss_pred ChHHHhcCCC---CCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHH-HHcCCC--CCH
Confidence 5789998321 46788999999999999999999999999999887763 56677766 5555 578885 555
Q ss_pred c---cccccCCChhhHHHHHHHHHHHhh
Q psy18058 252 E---DIFVEQPDEKSIITYVVTYYHYFS 276 (2301)
Q Consensus 252 e---dv~~~~~de~si~~yv~~~~~~~~ 276 (2301)
+ +|..+.| -.+...+..+|..+.
T Consensus 75 ~~i~~i~~~~~--Gaae~lL~~L~~~l~ 100 (158)
T PF06294_consen 75 EDIEGIINCKP--GAAESLLYQLYTKLT 100 (158)
T ss_dssp HHHHHHHTT-T--TTTHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC--CHHHHHHHHHHHHHH
Confidence 5 4556666 666666777777763
No 115
>KOG0248|consensus
Probab=94.66 E-value=0.034 Score=69.33 Aligned_cols=93 Identities=15% Similarity=0.278 Sum_probs=68.0
Q ss_pred CCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceecc-CcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHH
Q psy18058 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR-GGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254 (2301)
Q Consensus 2176 ~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~-~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~ 2254 (2301)
.++|+++|+|++.+.+.||+.+. +....|..++++. ++....+. -...|.+.+.. ..|.|-+.++.-.
T Consensus 262 ~k~lkrr~~v~k~gqi~~y~~~~------~~~~~p~s~~d~~s~~~~~~~~----~s~~fqli~~t-~~~~~~~~s~~lt 330 (936)
T KOG0248|consen 262 IKSLKRRYVVFKNGQISFYRKHN------NRDEEPASKIDIRSVTKLEQQG----AAYAFQLITST-DKMNFMTESERTT 330 (936)
T ss_pred HHHHHhHheeeccceEEEEEcCC------CccccccCcccccccceeeccc----hhHHhhhhhhc-eeEEEeccChhhh
Confidence 68899999999999999999877 3334555667765 33333322 24678887664 3899999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcC
Q psy18058 2255 NKWVTALSNVCEQQASGGPSSRSQT 2279 (2301)
Q Consensus 2255 ~~W~~~i~~~~~~~~~~~~~~~~~~ 2279 (2301)
.+|++.|..+|......++..+..+
T Consensus 331 ~dw~~iL~~~iKv~~~~~~a~~~~p 355 (936)
T KOG0248|consen 331 HDWVTILSAAIKATTLREMASRVTP 355 (936)
T ss_pred hhhHHHHHHHHHHHhccchhhhcCC
Confidence 9999999999987655444333333
No 116
>KOG3723|consensus
Probab=94.52 E-value=0.024 Score=68.95 Aligned_cols=100 Identities=19% Similarity=0.396 Sum_probs=71.4
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCC----CC
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS----KK 2230 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~----kr 2230 (2301)
+-.||-|.-| .||=--.|-|+.+||.|.|..|.|-|..... . ...++|+|..-.-..+-..+ .-
T Consensus 735 p~iEGQLKEK-----KGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~--d-----S~~~~IDl~~IRSVk~v~~kr~~rsl 802 (851)
T KOG3723|consen 735 PLIEGQLKEK-----KGRWRFIKRWKTRYFTLSGAQLLFQKGKSKD--D-----SDDCPIDLSKIRSVKAVAKKRRDRSL 802 (851)
T ss_pred chhcchhhhh-----ccchhhhhhhccceEEecchhhhcccCCCCC--C-----CCCCCccHHHhhhHHHHHhhhhhccc
Confidence 3678888544 3442234569999999999999987766521 1 12257888754443322211 22
Q ss_pred CceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2231 KHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2231 ~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
+-.|.+-|+|. +|.+.|+|+...++|+++++-+++.
T Consensus 803 pKAFEIFTAD~-T~ILKaKDeKNAEEWlqCL~IavAH 838 (851)
T KOG3723|consen 803 PKAFEIFTADK-TYILKAKDEKNAEEWLQCLNIAVAH 838 (851)
T ss_pred chhhheeecCc-eEEeecccccCHHHHHHHHHHHHHH
Confidence 46899999988 5999999999999999999998874
No 117
>PF13514 AAA_27: AAA domain
Probab=94.30 E-value=46 Score=49.19 Aligned_cols=336 Identities=13% Similarity=0.203 Sum_probs=163.3
Q ss_pred cCChhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q psy18058 555 GKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLA---VERR 631 (2301)
Q Consensus 555 g~dl~~v~~ll~kh~~l~~di~~~~~~v~~l~~~a~~l~~~~~~~~~~~~~~~~i~~~l~~L~~~~~~L~~~~---~~R~ 631 (2301)
|+.+ .+..++..++.++.+|............ +...+..+...+..+.... ..+.
T Consensus 147 g~~~-~in~~l~~l~e~~~~l~~~~~~~~~y~~---------------------l~~~~~~~~~~~~~l~~~~~~l~~~~ 204 (1111)
T PF13514_consen 147 GRKP-EINQALKELKELERELREAEVRAAEYQE---------------------LQQALEEAEEELEELRAELKELRAEL 204 (1111)
T ss_pred CCCh-HHHHHHHHHHHHHHHHHHHhccHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 5778888888888887665555433322 2233334444444443333 3345
Q ss_pred HHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhcCCCC-CChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q psy18058 632 ARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIG-HDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHF 710 (2301)
Q Consensus 632 ~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~~~~g-~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~~~~~ 710 (2301)
..|+.....+-++.....+...|.+... ..+++ ...........+...+...+......+..+...-..+... +
T Consensus 205 ~~ler~~~~~p~~~~~~~l~~~l~~l~~---~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~--~ 279 (1111)
T PF13514_consen 205 RRLERLRRAWPLLAELQQLEAELAELGE---VPDFPEDGAERLEQLEEELAEAQAQLERLQEELAQLEEELDALPVD--E 279 (1111)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhcCC---cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--H
Confidence 5566556666666666665554433211 11232 3445566667777777777777777777776555443211 0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcc----------CCCCChHhHH
Q psy18058 711 GADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSE----------DVGRDEANVQ 780 (2301)
Q Consensus 711 ~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a~~~~qf~~~~~el~~Wl~e~~~~l~~~----------~~g~d~~~~~ 780 (2301)
..-.....+..|..+...+... ...+.....+.......+......+... +.......+.
T Consensus 280 ~ll~~~~~I~~L~~~~~~~~~~----------~~dl~~~~~e~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~i~ 349 (1111)
T PF13514_consen 280 ELLAHAAEIEALEEQRGEYRKA----------RQDLPRLEAELAELEAELRALLAQLGPDWDEEDLEALDPSLAARERIR 349 (1111)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhhcCCCHHHHHHHH
Confidence 1111223333333322222211 1122223333444444444444444411 0112234566
Q ss_pred HHHHHhHHHHHHHHHhHHHHHHHHHHHh-------hhcCCCCCChhHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Q psy18058 781 SLLKKHKDVTEELKNYASTIEALRNQAS-------QLGDQDKESPEVLERLASIEFR------YKELLELAKLRKQRLLD 847 (2301)
Q Consensus 781 ~ll~kh~~l~~el~~~~~~i~~L~~~~~-------~L~~~~~~~~~v~~~l~~L~~~------~~~L~~~~~~R~~~Le~ 847 (2301)
.++..+..+...+......+........ .+.+. ...+.+...+...... +......+......|.
T Consensus 350 ~l~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~-~~~~~l~~al~~~~~~~d~~~~~~~~~~~~~~~~~~l~- 427 (1111)
T PF13514_consen 350 ELLQEREQLEQALAQARRELEEAERELEQLQAELAALPAP-PDPEALRAALEAAQRLGDLEARLQEAEQALEAAERRLA- 427 (1111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccc-CCChHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-
Confidence 7777777777666655555544444333 33222 2333344444444332 2222222222222222
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHH-------HhhcC-
Q psy18058 848 ALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQ-------LLHVE- 919 (2301)
Q Consensus 848 al~l~~~~~e~~~l~~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~-------L~~~~- 919 (2301)
..+..+-.|-....... .+.+ .+.+.+......+..+...+......+..+...... |...+
T Consensus 428 --------~~l~~L~~w~~~~~~l~-~~~~-P~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 497 (1111)
T PF13514_consen 428 --------AALAALGPWSGDLDALA-ALPL-PSRETVEAFRAEFEELERQLRRARDRLEELEEELARLEARLRRLAAAGD 497 (1111)
T ss_pred --------HHHHhcCCCCCChHHHh-ccCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22233334544443332 2222 356677777777777777776666655555444333 33333
Q ss_pred CCCchHHHHHHHHHHHHHHH
Q psy18058 920 HPNSEQIVTRQNQLNHDWAG 939 (2301)
Q Consensus 920 ~~~~~~I~~~~~~L~~rw~~ 939 (2301)
.+....+..-...=...|..
T Consensus 498 v~t~~~l~~aR~~Rd~~W~~ 517 (1111)
T PF13514_consen 498 VPTEEELAAARARRDAAWQL 517 (1111)
T ss_pred CCCHHHHHHHHHHHHHHhcc
Confidence 35566676666666677776
No 118
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation [].; GO: 0000921 septin ring assembly, 0005940 septin ring, 0016021 integral to membrane
Probab=93.97 E-value=32 Score=46.22 Aligned_cols=356 Identities=16% Similarity=0.296 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHH
Q psy18058 1032 AIRERIKQIRIIWEQLT-QMLKERDAKLEEAGD------LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQH 1104 (2301)
Q Consensus 1032 ~i~~~l~~L~~~w~~L~-~~~~~R~~~L~~a~~------~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h 1104 (2301)
............|+.+. ..+.+....|.++.. +.+....+.++..-|..++..+... ..++..++...
T Consensus 57 qt~~~fe~w~~~w~~i~~~~~~~ie~~L~~ae~~~~~~rf~ka~~~i~~~~~~l~~~e~~i~~i-----~~~l~~L~~~e 131 (560)
T PF06160_consen 57 QTEEKFEEWRQKWDEIVTKQLPEIEEQLFEAEEYADKYRFKKAKQAIKEIEEQLDEIEEDIKEI-----LDELDELLESE 131 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 35677888999999988 667777777766543 2334455666776777776665432 45567777777
Q ss_pred HHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy18058 1105 QAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQA 1184 (2301)
Q Consensus 1105 ~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~ 1184 (2301)
..-+.+|......|..+......-.. . -.+....|...|..+...+......... ...++..--+.....++..+
T Consensus 132 ~~nr~~i~~l~~~y~~lrk~ll~~~~---~-~G~a~~~Le~~L~~ie~~F~~f~~lt~~-GD~~~A~eil~~l~~~~~~l 206 (560)
T PF06160_consen 132 EKNREEIEELKEKYRELRKELLAHSF---S-YGPAIEELEKQLENIEEEFSEFEELTEN-GDYLEAREILEKLKEETDEL 206 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh---h-hchhHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
Confidence 77888888888888877765433321 1 1245667888888888877766554332 11222111122222333333
Q ss_pred HHHHHHHhhhh--ccCCCCCCHHHHHHHHHH---------HHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHHHH
Q psy18058 1185 EVLLSQQEHVL--SKDETPVNLEQVENLIKR---------HEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253 (2301)
Q Consensus 1185 ~~wL~~~E~~L--~~~~~~~~l~~~e~~l~k---------~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l 1253 (2301)
..-|...=..+ -...+|+-+++++.-.++ |-++...+......+......-..| +-+.+...+
T Consensus 207 ~~~~e~IP~l~~~l~~~~P~ql~eL~~gy~~m~~~gy~l~~~~i~~~i~~i~~~l~~~~~~L~~l------~l~~~~~~~ 280 (560)
T PF06160_consen 207 EEIMEDIPKLYKELQKEFPDQLEELKEGYREMEEEGYYLEHLDIEEEIEQIEEQLEEALALLKNL------ELDEVEEEN 280 (560)
T ss_pred HHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC------CHHHHHHHH
Confidence 33333222222 122344444444433332 2234444444444443333222222 112222223
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHh
Q psy18058 1254 DNIN----DRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASN 1329 (2301)
Q Consensus 1254 ~~l~----~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~ 1329 (2301)
+.+. .-++.+......|...-+..-.+..|...+.+-..-+..-... ...+|.=. +..+...+.+...+...
T Consensus 281 ~~i~~~Id~lYd~le~E~~Ak~~V~~~~~~l~~~l~~~~~~~~~l~~e~~~-v~~sY~L~---~~e~~~~~~l~~~l~~l 356 (560)
T PF06160_consen 281 EEIEERIDQLYDILEKEVEAKKYVEKNLKELYEYLEHAKEQNKELKEELER-VSQSYTLN---HNELEIVRELEKQLKEL 356 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCC---chHHHHHHHHHHHHHHH
Confidence 2222 2233333333333222222222222222222211111110000 01111100 01223334444444444
Q ss_pred HHHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHhcHHHHHHhHHHHHHhhcc
Q psy18058 1330 KDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNR-EVLIHQTCDDIDSWMNELEKQIEN 1408 (2301)
Q Consensus 1330 ~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~-~~~f~~~~~~l~~WL~~~E~~L~~ 1408 (2301)
...+..+.. .+..+...-..|...+.++...-..+...-..-...|..... -..-...+..+..-|..+...+..
T Consensus 357 ~~~~~~~~~----~i~~~~~~yS~i~~~l~~~~~~l~~ie~~q~~~~~~l~~L~~dE~~Ar~~l~~~~~~l~~ikR~lek 432 (560)
T PF06160_consen 357 EKRYEDLEE----RIEEQQVPYSEIQEELEEIEEQLEEIEEEQEEINESLQSLRKDEKEAREKLQKLKQKLREIKRRLEK 432 (560)
T ss_pred HHHHHHHHH----HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433322 233344444556777777766666666666655555655532 233444666666666777666664
Q ss_pred CCC
Q psy18058 1409 EDT 1411 (2301)
Q Consensus 1409 ~~~ 1411 (2301)
...
T Consensus 433 ~nL 435 (560)
T PF06160_consen 433 SNL 435 (560)
T ss_pred cCC
Confidence 333
No 119
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=93.67 E-value=0.23 Score=64.70 Aligned_cols=105 Identities=17% Similarity=0.177 Sum_probs=70.5
Q ss_pred CccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccC-ccccccc--CCCC
Q psy18058 2153 DADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRG-GSAQVAD--DYSK 2229 (2301)
Q Consensus 2153 ~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~-a~~~~~~--d~~k 2229 (2301)
..+.+||||++= |-.|.+..-=+.+||||.|..|.+||.+.... ..|..+..+.+ +.++-.. .++.
T Consensus 2 ~~~~~eGW~y~~-----g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~------~~pirs~~id~~~rVed~Gr~~~~g 70 (719)
T PLN00188 2 SKVVYEGWMVRY-----GRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN------QVPIKTLLIDGNCRVEDRGLKTHHG 70 (719)
T ss_pred CcceEeeEEEEE-----cccccccccceeEEEEEecchhhhcccCCccc------cccceeeccCCCceEeecCceEEcC
Confidence 356799999886 55555666678999999999999999877322 12222333322 2221111 1222
Q ss_pred C-CceEEEE--eCCCCEEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2230 K-KHVFRVK--ADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2230 r-~~vf~l~--~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
+ =+||++= ......-.|.|.+-+|...|+.+|..|+...
T Consensus 71 ~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 71 HMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred ceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 2 2566663 4556789999999999999999999998753
No 120
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation [].; GO: 0000921 septin ring assembly, 0005940 septin ring, 0016021 integral to membrane
Probab=93.35 E-value=40 Score=45.34 Aligned_cols=123 Identities=11% Similarity=0.178 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHh------HHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHH
Q psy18058 924 EQIVTRQNQLNHDWAGLR-EKAEGKRDELNSAHG------VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQR 996 (2301)
Q Consensus 924 ~~I~~~~~~L~~rw~~l~-~~~~~r~~~L~~a~~------~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~ 996 (2301)
++........+..|..+. ..+......|..+-. +......++.+.+-|...+..+.. =..++..+..
T Consensus 56 Gqt~~~fe~w~~~w~~i~~~~~~~ie~~L~~ae~~~~~~rf~ka~~~i~~~~~~l~~~e~~i~~------i~~~l~~L~~ 129 (560)
T PF06160_consen 56 GQTEEKFEEWRQKWDEIVTKQLPEIEEQLFEAEEYADKYRFKKAKQAIKEIEEQLDEIEEDIKE------ILDELDELLE 129 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH
Confidence 445667888889998888 556666666654432 233334555555555555555433 1344455555
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 997 RLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLK 1052 (2301)
Q Consensus 997 k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~ 1052 (2301)
..+.-...+..+..++..+....-.-.-...+..+.|...+..+...+........
T Consensus 130 ~e~~nr~~i~~l~~~y~~lrk~ll~~~~~~G~a~~~Le~~L~~ie~~F~~f~~lt~ 185 (560)
T PF06160_consen 130 SEEKNREEIEELKEKYRELRKELLAHSFSYGPAIEELEKQLENIEEEFSEFEELTE 185 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666777777777776665444444556677788888888888887766644
No 121
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=93.13 E-value=0.32 Score=48.26 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=56.0
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCc-EEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGT-LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK 2230 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~-~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr 2230 (2301)
+..+.++|+|.++.-+ ..++++++|+++ .|+|+..... ..+ +.|++....-.. .+-
T Consensus 10 ge~Il~~g~v~K~kgl----------~~kkR~liLTd~PrL~Yvdp~~~-------~~K--GeI~~~~~l~v~----~k~ 66 (104)
T PF14593_consen 10 GELILKQGYVKKRKGL----------FAKKRQLILTDGPRLFYVDPKKM-------VLK--GEIPWSKELSVE----VKS 66 (104)
T ss_dssp T--EEEEEEEEEEETT----------EEEEEEEEEETTTEEEEEETTTT-------EEE--EEE--STT-EEE----ECS
T ss_pred CCeEEEEEEEEEeece----------EEEEEEEEEccCCEEEEEECCCC-------eEC--cEEecCCceEEE----Ecc
Confidence 5678899999887222 278999999987 5555543331 112 244444322111 133
Q ss_pred CceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2231 KHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2231 ~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
...|.|.|+ ++.|.|..++.. ...|+++|+.+...
T Consensus 67 ~~~F~I~tp-~RtY~l~d~~~~-A~~W~~~I~~~~~~ 101 (104)
T PF14593_consen 67 FKTFFIHTP-KRTYYLEDPEGN-AQQWVEAIEEVKKQ 101 (104)
T ss_dssp SSEEEEEET-TEEEEEE-TTS--HHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 469999999 779999885544 67799999987653
No 122
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=92.78 E-value=0.17 Score=48.86 Aligned_cols=95 Identities=13% Similarity=0.303 Sum_probs=67.6
Q ss_pred cceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCC--CCCc
Q psy18058 2155 DHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS--KKKH 2232 (2301)
Q Consensus 2155 ~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~--kr~~ 2232 (2301)
+.++||+.+= ||- -...|+++|+-|-.+.|-+|..... ..+ ..|.+ .-.-++..|+. |-.|
T Consensus 3 cIvhGyi~KL-----GGP--Fls~WQ~Ry~~LfPNRLE~~~~~~~--~~~-------eLi~M-~~i~~V~~e~~~iK~~~ 65 (116)
T cd01240 3 CIVHGYIKKL-----GGP--FLSQWQTRYFKLYPNRLELYGESEA--NKP-------ELITM-DQIEDVSVEFQQIKEEN 65 (116)
T ss_pred eEEeeehhhh-----CCH--HHHHHHHHHheeCcceeeecccccc--cCC-------cEEEe-ehhhhcchhheeeccCc
Confidence 4578887432 432 2467999999999999999865441 111 12222 22333444444 7789
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
++.++..+|..|++.+.|+-.+..|...|..+-.
T Consensus 66 CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r 99 (116)
T cd01240 66 CILLKIRDEKKIVLTNSDEIELKQWKKELRDAHR 99 (116)
T ss_pred eEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999977654
No 123
>KOG3523|consensus
Probab=92.39 E-value=0.23 Score=62.08 Aligned_cols=86 Identities=19% Similarity=0.365 Sum_probs=57.1
Q ss_pred CCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccc--cc---ccCCCCCCceEEEEeCCC-----CEEE
Q psy18058 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSA--QV---ADDYSKKKHVFRVKADNG-----AEYL 2245 (2301)
Q Consensus 2176 ~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~--~~---~~d~~kr~~vf~l~~~~g-----~~~l 2245 (2301)
.+.-+.+|+.|-++.|.+-|.+..... ....+.+...|.+..+.- .. +..-..++|+|.|++-.+ .+||
T Consensus 496 k~~~~~vylfLFnD~Llitk~k~~~~f-~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~l 574 (695)
T KOG3523|consen 496 KRLSKTVYLFLFNDLLLITKKKSEGSF-QVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELL 574 (695)
T ss_pred ccccceeeeeeecceeeEeeecCCCce-EEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeee
Confidence 456679999999999999887763211 223344433333332221 01 112346889999985322 5999
Q ss_pred EccCCHHHHHHHHHHHH
Q psy18058 2246 FQAKNDEEMNKWVTALS 2262 (2301)
Q Consensus 2246 fqa~~~~~~~~W~~~i~ 2262 (2301)
|+|+++.+|..||.|+.
T Consensus 575 L~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 575 LSAESQSDRQRWISALR 591 (695)
T ss_pred ecCCchHHHHHHHHhcC
Confidence 99999999999999985
No 124
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.04 E-value=0.6 Score=46.32 Aligned_cols=80 Identities=19% Similarity=0.306 Sum_probs=57.9
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCC------CceEEEEeCC-CCEEEEccCCHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK------KHVFRVKADN-GAEYLFQAKNDE 2252 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr------~~vf~l~~~~-g~~~lfqa~~~~ 2252 (2301)
+.+++.|-++.|.+.|.... ..+...+++ .|++..+.+.-.+|-.+. +|.|+|...+ +.-|+|.|++.+
T Consensus 19 q~R~~FLFD~~LI~CKkd~~--r~~~~~yKg--ri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e 94 (109)
T cd01224 19 SSRVLFLFDHQMVLCKKDLI--RRDHLYYKG--RIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAE 94 (109)
T ss_pred ccEEEEEecceEEEEecccc--cCCcEEEEE--EEEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHH
Confidence 47888999999999886541 122233343 677777766655443333 7999998655 678999999999
Q ss_pred HHHHHHHHHHH
Q psy18058 2253 EMNKWVTALSN 2263 (2301)
Q Consensus 2253 ~~~~W~~~i~~ 2263 (2301)
+-..|+.++..
T Consensus 95 ~K~~Wm~a~~~ 105 (109)
T cd01224 95 RKHRWLSAFAL 105 (109)
T ss_pred HHHHHHHHHHH
Confidence 99999999853
No 125
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.02 E-value=0.96 Score=45.37 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=59.1
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc--C----CCCCCceEEEEeCCC-CEEEEccCCHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD--D----YSKKKHVFRVKADNG-AEYLFQAKNDE 2252 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~--d----~~kr~~vf~l~~~~g-~~~lfqa~~~~ 2252 (2301)
+.+|+-|-...|.+.|........+...++. .+.|....+.... | -++-+|.|-|...+| ..|.|.|++++
T Consensus 21 k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke--~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~~~~~~~~~f~~Ktee 98 (116)
T cd01223 21 KLRYIFLFDKAVIVCKALGDNTGDMQYTYKD--IHDLADYKIENNPSRDTEGRDTRWKYGFYLAHKQGKTGFTFYFKTEH 98 (116)
T ss_pred ceeEEEEecceEEEEEecCCCCCCccEEhHH--hhhhheeeeEecCccCcccCCcceEEEEEEEecCCCccEEEEeCCHH
Confidence 5899999999999999665321112122222 2333332233221 1 134579999998776 88999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy18058 2253 EMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2253 ~~~~W~~~i~~~~~~~ 2268 (2301)
+-..|+.+|..|++..
T Consensus 99 ~K~kWm~al~~a~sni 114 (116)
T cd01223 99 LRKKWLKALEMAMSNI 114 (116)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999987743
No 126
>KOG0971|consensus
Probab=91.97 E-value=57 Score=43.69 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH
Q psy18058 1209 NLIKRHEAFLTTMEANDDKINGVVQ 1233 (2301)
Q Consensus 1209 ~~l~k~~~f~~~l~~~~~~v~~l~~ 1233 (2301)
.+.+|-.+|..+|++.+..|+.|..
T Consensus 1016 ~lr~Ke~efeetmdaLq~di~~lEs 1040 (1243)
T KOG0971|consen 1016 LLRKKEKEFEETMDALQADIDQLES 1040 (1243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777888888888888887744
No 127
>KOG0532|consensus
Probab=91.66 E-value=0.13 Score=64.13 Aligned_cols=81 Identities=27% Similarity=0.332 Sum_probs=60.4
Q ss_pred HHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCC-----CCCCCCc-hhHHHhhHHHHHHHHHhccccccc-C
Q psy18058 59 QKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP-----RPTKGKM-RIHCLENVDKALQFLREQRVHLEN-M 131 (2301)
Q Consensus 59 ~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~-----~~~~~~~-~~~~~~N~~~al~~~~~~~~~l~~-i 131 (2301)
.+-|-+.|.. .. -.||...|.|||+||+|++.+.|..++ -|..++. -..|--||+.-|+++++.||+=.. +
T Consensus 582 Rk~iEtRLk~-sL-p~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaCRkiGVpEa~lC 659 (722)
T KOG0532|consen 582 RKLIETRLKV-SL-PEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEACRKIGVPEADLC 659 (722)
T ss_pred HHHHHHHhcc-cC-chhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHHHHcCCChHhhc
Confidence 3444454432 22 348999999999999999999997654 4444543 348889999999999999998554 7
Q ss_pred CcccccCCcc
Q psy18058 132 GSHDIVDGNP 141 (2301)
Q Consensus 132 ~~~di~~g~~ 141 (2301)
++.||+.+..
T Consensus 660 S~~Dilq~~~ 669 (722)
T KOG0532|consen 660 SPMDILQKIE 669 (722)
T ss_pred CHHHhhhhhc
Confidence 7889987743
No 128
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=90.70 E-value=0.96 Score=44.24 Aligned_cols=79 Identities=14% Similarity=0.197 Sum_probs=54.4
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVT 2259 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~ 2259 (2301)
.++.+.|-++.|.+=.-... ..+.-...++|.+-.+.--.|-..=||+|.|.++.+ .+.|||.+..+-..|+.
T Consensus 20 ~rv~~FLfND~Lvva~~~~~------~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~t~~~-s~i~qaes~~~K~eWl~ 92 (100)
T cd01226 20 QRVMLFLLNDRLIVGNINAA------GKYVMESTYSLNSVAVVNVKDRENAKKVLKLLIFPE-SRIYQCESARIKTEWFE 92 (100)
T ss_pred ceEEEEEeccEEEEEEeccc------ceEEEEEEEehHHeEEEecCCCcCcCceEEEEeCCc-cEEEEeCCHHHHHHHHH
Confidence 34645555555544322110 134556678887766654444344589999999977 89999999999999999
Q ss_pred HHHHHH
Q psy18058 2260 ALSNVC 2265 (2301)
Q Consensus 2260 ~i~~~~ 2265 (2301)
.|..|.
T Consensus 93 ~le~a~ 98 (100)
T cd01226 93 ELEQAK 98 (100)
T ss_pred HHHHHh
Confidence 999875
No 129
>PF15406 PH_6: Pleckstrin homology domain
Probab=90.61 E-value=0.58 Score=45.51 Aligned_cols=68 Identities=24% Similarity=0.386 Sum_probs=47.9
Q ss_pred EEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHH
Q psy18058 2183 FVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALS 2262 (2301)
Q Consensus 2183 ~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~ 2262 (2301)
|..=+|..|.||..... ...|.+.|+|..++-.. .| -.|-|.++. +|...-|+|.|..+..+||..|.
T Consensus 43 wAsqTGKGLLF~~K~~d-------ka~P~GiinLadase~~-~~---g~~kF~f~~-~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 43 WASQTGKGLLFFSKAED-------KASPSGIINLADASEPE-KD---GSNKFHFKI-KGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred hhhccCceEEEEecccc-------ccCCcceEehhhccccc-cC---CCceEEEEe-CCceeeeecCCHHHhccHHHHhh
Confidence 44458888888874221 11567789997655433 22 235566555 79999999999999999999885
No 130
>KOG4424|consensus
Probab=89.53 E-value=0.51 Score=59.05 Aligned_cols=104 Identities=20% Similarity=0.313 Sum_probs=76.7
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~ 2231 (2301)
+-...+||.|.+- .. .+.+=..+|++|-++.+.|.+... ..++..+.+...+++.|+.+.. .+|..++
T Consensus 269 sreLiKEG~l~Ki-s~-------k~~~~qeRylfLFNd~~lyc~~r~---~~~~~k~~~r~~~s~~~~~v~~-~~~~~~~ 336 (623)
T KOG4424|consen 269 SRELIKEGQLQKI-SA-------KNGTTQERYLFLFNDILLYCKPRK---RLPGSKYEVRARCSISHMQVQE-DDNEELP 336 (623)
T ss_pred HHHHhhccceeee-ec-------cCCCcceeEEEEehhHHHhhhhhh---hcccceeccceeeccCcchhcc-cccccCC
Confidence 5577899998543 11 234568899999998887777665 2234455666667777765533 4677889
Q ss_pred ceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2232 ~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
|.|.|+-.+. ..-|+|.++.+..+||++|+.+|..+
T Consensus 337 ~tF~~~G~~r-~vel~a~t~~ek~eWv~~I~~~Id~~ 372 (623)
T KOG4424|consen 337 HTFILTGKKR-GVELQARTEQEKKEWVQAIQDAIDKH 372 (623)
T ss_pred ceEEEecccc-eEEeecCchhhHHHHHHHHHHHHHHH
Confidence 9999997543 67899999999999999999999754
No 131
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []. It is also thought to modulate cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organisation during mitosis. Dynamitin is also involved in anchoring microtubules to centrosomes and may play a role in synapse formation during brain development []. ; GO: 0007017 microtubule-based process, 0005869 dynactin complex
Probab=89.50 E-value=60 Score=41.60 Aligned_cols=58 Identities=12% Similarity=0.236 Sum_probs=40.3
Q ss_pred HhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHHHH
Q psy18058 777 ANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKEL 834 (2301)
Q Consensus 777 ~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~v~~~l~~L~~~~~~L 834 (2301)
...+...+++..|..|+......|..+......-.........+...+..|......|
T Consensus 87 ~e~Es~~~kl~RL~~Ev~EL~eEl~~~~~~~~~~~~e~~~~~~l~~~~~~L~~~L~~l 144 (388)
T PF04912_consen 87 SEKESPEQKLQRLRREVEELKEELEKRKADSKESDEEKISPEELAQQLEELSKQLDSL 144 (388)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCChhhHHHHHHHHHHHHHHh
Confidence 4456677899999999999988888876655443333334445667777777766666
No 132
>KOG1450|consensus
Probab=89.18 E-value=0.73 Score=59.62 Aligned_cols=115 Identities=17% Similarity=0.275 Sum_probs=86.3
Q ss_pred CCccceEeEecceeeeccCCccC---CCCCCceEEEEEeCcEEEEEecCCCCCCCC----CccCCCCcceeccCcccccc
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRA---SNRSWDKIFVSLRGTLLYFYKDQKSAKSSP----EIYYKNETPFELRGGSAQVA 2224 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~---~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~----~~~~~~~~~i~l~~a~~~~~ 2224 (2301)
...+...||+..-. ...+|..+ ...-|..-|+.+.|..++||.+.+...... ........+.++.++.....
T Consensus 244 ~~~~~~~~~~~~~~-~~~~g~~~~pl~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~~~~~~~sps~~~~~~~~~ 322 (650)
T KOG1450|consen 244 PPEPEYAGYTEQTE-ILSPGRTARPLKSTVWETSTDALTGNPLYYYSDTGSTTWSGHHSPPEKAEIAQSPSLSPAMVSAS 322 (650)
T ss_pred ccchhhhhhhhhhh-hcccccccccCCCcccccchhhcccccceeecccCcccccCCCCccccccCCCCcccchhhhccc
Confidence 34555677776665 55566544 455699999999999999999987554432 12222344556667666666
Q ss_pred cCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2225 DDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2225 ~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
.....+++++.+++..+..|+.+.+++....+|.......+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~net~~~d~~~~~~~~~~~ 365 (650)
T KOG1450|consen 323 KNKSTRKNTLWLTTNRTSKVLNRSHNETSFEDWSSNLPEVINE 365 (650)
T ss_pred cccCCccceeeeeecCCceeeecCCCCccccchhhcchhhhhc
Confidence 6767789999999999999999999999999999999888763
No 133
>PF15408 PH_7: Pleckstrin homology domain
Probab=87.94 E-value=0.33 Score=44.13 Aligned_cols=90 Identities=20% Similarity=0.317 Sum_probs=57.0
Q ss_pred EeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc-CCC-C----CC
Q psy18058 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD-DYS-K----KK 2231 (2301)
Q Consensus 2158 eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~-d~~-k----r~ 2231 (2301)
||||++- + ..+-+++|++|+|..+.||-|+...-. .++.|....+..+- +++ - --
T Consensus 1 EGYLY~~---E-------~~si~rRF~~L~~K~~~~~~~KGG~~L---------~sF~L~~s~~s~Pm~~~~~A~~N~Gi 61 (104)
T PF15408_consen 1 EGYLYRD---E-------DSSIQRRFVMLRSKQFNMYEDKGGQYL---------CSFQLSSSVVSHPMVNFSQAVPNLGI 61 (104)
T ss_pred CCeEEEe---c-------cchHHHHHHhhhhceeEEecccCCcee---------eeeehhhhhhhcccccccccCCCCCe
Confidence 6888775 1 245678899999999999999872111 12233322222221 111 1 12
Q ss_pred ceE--EEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2232 HVF--RVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2232 ~vf--~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
+.| ....++|.-.-.=|+|.+-|..||+++|.-..
T Consensus 62 ~A~G~L~~~~~~~~~~~FA~S~~~~~~Wi~~mN~~s~ 98 (104)
T PF15408_consen 62 NAFGFLMYSPSRRHVQCFASSKKVCQSWIQVMNSPSF 98 (104)
T ss_pred eEEEEEEecCCcchhhhhhhHHHHHHHHHHHhcChhh
Confidence 444 44568887777778999999999999986433
No 134
>KOG0996|consensus
Probab=87.87 E-value=1.4e+02 Score=41.93 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=51.2
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy18058 997 RLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAG-DLHRFLRDLDHFQ 1075 (2301)
Q Consensus 997 k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~-~~~~f~~~~~~l~ 1075 (2301)
....++.++..+.......+..+..........+..|...+..+...|..+...+..-+..++-+. .+.-+........
T Consensus 441 ~i~~~~~ei~~L~~~~~~~~~~l~e~~~~l~~~t~~~~~e~~~~ekel~~~~~~~n~~~~e~~vaesel~~L~~~~~~~~ 520 (1293)
T KOG0996|consen 441 EIQKCQTEIEQLEELLEKEERELDEILDSLKQETEGIREEIEKLEKELMPLLKQVNEARSELDVAESELDILLSRHETGL 520 (1293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555555555555555555554444445566888888888888888777776666665543 3443443334444
Q ss_pred HHHHHHHHhh
Q psy18058 1076 VWLTKTQTDV 1085 (2301)
Q Consensus 1076 ~Wl~~~e~~l 1085 (2301)
.-+.++...+
T Consensus 521 ~~~e~lk~~L 530 (1293)
T KOG0996|consen 521 KKVEELKGKL 530 (1293)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 135
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=86.51 E-value=4.7 Score=39.74 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=53.2
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCC--CEEEEccCCHHHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNG--AEYLFQAKNDEEMNKW 2257 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g--~~~lfqa~~~~~~~~W 2257 (2301)
+.+|+-|-...|.|-|.... ...++. .|.+.+-.+.-..+ .-++.|.|...+. ..|.|+|.|.++...|
T Consensus 17 ~eR~vFLFe~~ll~~K~~~~-----~y~~K~--~i~~~~l~i~e~~~--~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W 87 (97)
T cd01222 17 KPRLLFLFQTMLLIAKPRGD-----KYQFKA--YIPCKNLMLVEHLP--GEPLCFRVIPFDDPKGALQLTARNREEKRIW 87 (97)
T ss_pred CceEEEEecccEEEEEecCC-----eeEEEE--EEEecceEEecCCC--CCCcEEEEEecCCCceEEEEEecCHHHHHHH
Confidence 35889999999988886441 122332 45555444333222 2279999975532 4899999999999999
Q ss_pred HHHHHHHH
Q psy18058 2258 VTALSNVC 2265 (2301)
Q Consensus 2258 ~~~i~~~~ 2265 (2301)
+++|..++
T Consensus 88 ~~~i~~~i 95 (97)
T cd01222 88 TQQLKRAM 95 (97)
T ss_pred HHHHHHHh
Confidence 99999875
No 136
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []. Located at the C terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). These proteins also contain four coiled-coil domains [].
Probab=86.03 E-value=1.6e+02 Score=40.76 Aligned_cols=119 Identities=16% Similarity=0.270 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcHHHH
Q psy18058 1316 WTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDI 1395 (2301)
Q Consensus 1316 l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~~~~f~~~~~~l 1395 (2301)
-.++..++.++....-.+......+..|....-.... .+..+..........+..-...|.. .+...++
T Consensus 478 k~~~~~LQ~eLsEk~~~l~~~kee~s~l~s~~~K~~s----~i~~l~I~lEk~rek~~kl~~ql~k-------~~~~~e~ 546 (775)
T PF10174_consen 478 KAKLESLQKELSEKELQLEDAKEEASKLASSQEKKDS----EIERLEIELEKKREKHEKLEKQLEK-------LRANAEL 546 (775)
T ss_pred HHHHHHHhhhhHHHHHHHHHhhhHHHHHhhccchhhh----HHHHHHHHHHHhhhHHHHHHHHHHH-------HHhCHhh
Confidence 3344555666666666666666666666554321111 1222222222222222211122211 1111222
Q ss_pred HHhHHHHHHhhc--cCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1396 DSWMNELEKQIE--NEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQ 1445 (2301)
Q Consensus 1396 ~~WL~~~E~~L~--~~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~ 1445 (2301)
..-+..++..+. ..+.++.-..|..|+.-+..++.+-......+..|...
T Consensus 547 ~~r~~~Le~ev~~~~ee~~kaq~EVERLl~~L~~~E~EK~~ke~ki~~Leke 598 (775)
T PF10174_consen 547 RDRIQQLEQEVTRYREESEKAQAEVERLLDILREAENEKNDKEKKIGELEKE 598 (775)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 333333433332 24556666788888888888888877777777777655
No 137
>KOG1117|consensus
Probab=85.89 E-value=1.8 Score=56.43 Aligned_cols=103 Identities=16% Similarity=0.302 Sum_probs=71.5
Q ss_pred CCccceEeEecceeeeccCCccC----CCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccc---c
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRA----SNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV---A 2224 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~----~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~---~ 2224 (2301)
++.+...|||+....... |-. ....-.+.||||.|+.|+||...++ . .|-+.|.+..-.|-. +
T Consensus 489 s~s~~~~~fLyc~~sa~~--kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S--~------tP~~lI~~~Eivclav~~p 558 (1186)
T KOG1117|consen 489 SQSTFLCGFLYCAPSAAS--KLSSDRRLREETNRKWCVLGGGFLSYFENEKS--T------TPNGLININEIVCLAVHPP 558 (1186)
T ss_pred cccccccceeeechhhcc--CCCChhhhcccCCCceEEcCcchhhhhhhcCC--C------CCCceeeccceEEEeecCC
Confidence 344455599987744332 111 1223578899999999999998872 2 233456665544443 2
Q ss_pred cCCC--CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2225 DDYS--KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2225 ~d~~--kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.+|. .=.+.|.+-++.+..|+|-+.+.+....|..+|-..
T Consensus 559 d~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 559 DTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred CCCCCcCceeEEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 3443 335899999999999999999999999999998553
No 138
>KOG3549|consensus
Probab=85.32 E-value=1.8 Score=50.28 Aligned_cols=107 Identities=15% Similarity=0.342 Sum_probs=76.9
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC---C
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY---S 2228 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~---~ 2228 (2301)
+..+.--||++-+-. ...++++.+..|..|+|+.+|.|..+.-..+. -.+.+..+.+-...|.+..|. .
T Consensus 278 ~~qivyMGWvne~~q-----~~~s~q~y~P~FLaLkG~~~y~F~tPPv~t~d---w~rAe~ty~vye~mfki~Kdsd~~D 349 (505)
T KOG3549|consen 278 GEQIVYMGWVNEGVQ-----NNISWQSYKPRFLALKGTEVYLFETPPVNTAD---WSRAEVTYKVYETMFKIVKDSDTVD 349 (505)
T ss_pred cceEEEeeecccccc-----CcccccccCceeEEecCcEEEEEcCCCcchhh---hhhhhhhHHHHHHHHHHhccccccc
Confidence 455666799876521 11357778899999999999999866522111 123444555555555554332 3
Q ss_pred CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266 (2301)
Q Consensus 2229 kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~ 2266 (2301)
.|+|+|.|....|...+|..+-..++..|=++.+.|+-
T Consensus 350 ~R~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~Atf 387 (505)
T KOG3549|consen 350 SRQHCFLLQSSGGEPRYFSVELRSELARWENSFQAATF 387 (505)
T ss_pred cccceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHHh
Confidence 68999999999999999999999999999999988764
No 139
>KOG2046|consensus
Probab=83.33 E-value=2.8 Score=45.86 Aligned_cols=81 Identities=20% Similarity=0.325 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhHhcCCCCcc-cccCCCCccchhhHHHHHhhhCCCCcccc--ccCccCHHHHHHHHHHHHHHhcCCcc--
Q psy18058 173 AKDALLLWCQMKTAGYHNVN-VRNFTTSWRDGLAFNAIIHKHRPDLIQFE--KLSKSNAIYNLNNAFTVAEDKLGLTK-- 247 (2301)
Q Consensus 173 ~~~~ll~W~~~~~~~~~~~~-v~nf~~~~~dg~~~~~li~~~~p~~~~~~--~~~~~~~~~n~~~a~~~a~~~lgi~~-- 247 (2301)
...-|+.|+...... +.+ =.||...+.||..||.||+.+.|....+. +...-.-.+|+..-+..| ..+|++.
T Consensus 26 ~~~el~~WI~~~~~~--~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~~s~~~f~qmEnIs~Fi~a~-~~ygv~~~d 102 (193)
T KOG2046|consen 26 LEKELREWIENVVLT--ELPARGDFQDLLKDGVILCKLINKLYPGVVKKINESKMAFVQMENISNFIKAA-KKYGVPEVD 102 (193)
T ss_pred HHHHHHHHHHHhhcc--CCCcccCHHHHHcchHHHHHHHHHhCcCcccccccccccHHHHHHHHHHHHHH-HhcCCChhh
Confidence 455689999874211 222 46899999999999999999999655433 222335678888777666 6999974
Q ss_pred ccccccccc
Q psy18058 248 LLDAEDIFV 256 (2301)
Q Consensus 248 ~l~~edv~~ 256 (2301)
+...-|+..
T Consensus 103 ~FqtvDLfE 111 (193)
T KOG2046|consen 103 LFQTVDLFE 111 (193)
T ss_pred ccccccccc
Confidence 666666654
No 140
>KOG0996|consensus
Probab=82.09 E-value=2.4e+02 Score=39.76 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=88.3
Q ss_pred hHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Q psy18058 1309 AKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDS-NREVL 1387 (2301)
Q Consensus 1309 ~~~l~~~l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a-~~~~~ 1387 (2301)
|......+.++ +.|+....................-...+..+.+.+..+...|..+..........++.+ .++..
T Consensus 435 pe~~~~~i~~~---~~ei~~L~~~~~~~~~~l~e~~~~l~~~t~~~~~e~~~~ekel~~~~~~~n~~~~e~~vaesel~~ 511 (1293)
T KOG0996|consen 435 PEKARIEIQKC---QTEIEQLEELLEKEERELDEILDSLKQETEGIREEIEKLEKELMPLLKQVNEARSELDVAESELDI 511 (1293)
T ss_pred chhhHhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444 456666666666666666666555555667788889999999999888888888888877 56666
Q ss_pred HHhcHHHHHHhHHHHHHhhcc--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1388 IHQTCDDIDSWMNELEKQIEN--EDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEIL 1449 (2301)
Q Consensus 1388 f~~~~~~l~~WL~~~E~~L~~--~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l 1449 (2301)
+.........-++++...|.. .....+-..+..+-..+..+..++......+..+......+
T Consensus 512 L~~~~~~~~~~~e~lk~~L~~~~~~~~e~~~~l~~~k~~l~~~k~e~~~~~k~l~~~~~e~~~~ 575 (1293)
T KOG0996|consen 512 LLSRHETGLKKVEELKGKLLASSESLKEKKTELDDLKEELPSLKQELKEKEKELPKLRKEERNL 575 (1293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhHHHHHHHHHHH
Confidence 666666666777777666642 33333444555555555556666666666665555555443
No 141
>KOG1738|consensus
Probab=81.95 E-value=0.26 Score=62.39 Aligned_cols=69 Identities=22% Similarity=0.298 Sum_probs=54.5
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
..+|||.|+... .- ..-.|+++||||+++.|+.|..+... +++..|.|-+..+..+.+-.++++.|.
T Consensus 563 ~~qg~~~r~k~~-~~----~~~kW~k~~~~l~~~~l~~y~n~~~~--------~~e~~i~l~~~~i~~a~e~~~~~~~~~ 629 (638)
T KOG1738|consen 563 DRQGWLTRLKLN-HL----TQEKWRKIWMVLNDDPLLNYRNHRVR--------AAESVIKLPLFTISVAEEVLGKPELTG 629 (638)
T ss_pred hhhccchhhccc-hH----HHHHhhhheeeecCchhhhhhhhhhh--------chhheeeccchhhhhHHHhccCHhhhc
Confidence 467899888433 11 24569999999999999999998843 567799999999999998888877766
Q ss_pred EE
Q psy18058 2236 VK 2237 (2301)
Q Consensus 2236 l~ 2237 (2301)
..
T Consensus 630 ~~ 631 (638)
T KOG1738|consen 630 EK 631 (638)
T ss_pred cc
Confidence 43
No 142
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=81.61 E-value=6.2 Score=40.24 Aligned_cols=84 Identities=15% Similarity=0.230 Sum_probs=53.4
Q ss_pred ceEEEEEeCcEEEEEecCCCCC--CCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCC--CCEEEEccCCHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAK--SSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADN--GAEYLFQAKNDEEMN 2255 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~--~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~--g~~~lfqa~~~~~~~ 2255 (2301)
+.+.+-|-...|.|-|-..... ..+...|+. +|.+.+-...-..+-...++.+..+.+. ...|.+||+|.+.-.
T Consensus 25 ~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~--~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~ 102 (114)
T cd01232 25 RERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKS--KLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQ 102 (114)
T ss_pred ceeEEEEeeceEEEEEEeccCCCCCceeEEEec--ceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHH
Confidence 5677888888888888654221 122233333 4555544443333223445555555553 469999999999999
Q ss_pred HHHHHHHHHH
Q psy18058 2256 KWVTALSNVC 2265 (2301)
Q Consensus 2256 ~W~~~i~~~~ 2265 (2301)
.|+..|+...
T Consensus 103 ~W~~~I~~il 112 (114)
T cd01232 103 EWVKKIREIL 112 (114)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 143
>PRK01156 chromosome segregation protein; Provisional
Probab=80.90 E-value=3e+02 Score=39.96 Aligned_cols=20 Identities=5% Similarity=0.224 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHhhHHHHHHH
Q psy18058 1212 KRHEAFLTTMEANDDKINGV 1231 (2301)
Q Consensus 1212 ~k~~~f~~~l~~~~~~v~~l 1231 (2301)
.+...+...+......+..+
T Consensus 416 ~~~~~l~~~i~~l~~~i~~l 435 (895)
T PRK01156 416 VKLQDISSKVSSLNQRIRAL 435 (895)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444443333
No 144
>KOG1451|consensus
Probab=79.72 E-value=1.9e+02 Score=37.12 Aligned_cols=102 Identities=18% Similarity=0.288 Sum_probs=64.7
Q ss_pred ccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCce
Q psy18058 2154 ADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHV 2233 (2301)
Q Consensus 2154 ~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~v 2233 (2301)
+..+||||+..-.... ..+|.+|||+-...+=.|---.. ...++....+...+-|..|.--.. |--.|.++
T Consensus 264 p~t~eGYlY~QEK~~~------g~sWvKyYC~Y~retk~~TMvp~--~qk~g~k~g~~~~~~lKsC~RRkt-dSIdKRFC 334 (812)
T KOG1451|consen 264 PSTKEGYLYMQEKSKI------GKSWVKYYCVYSRETKIFTMVPA--NQKTGTKMGQTATFKLKSCSRRKT-DSIDKRFC 334 (812)
T ss_pred Ccccceeeeehhhhhc------cchhhhheeEeecccceEEEeec--ccCCCCcCCCcceEEehhhccCcc-ccccccee
Confidence 3469999987633332 35999999998754332221111 111222334555566666554433 44456799
Q ss_pred EEEEeCC-CCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2234 FRVKADN-GAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2234 f~l~~~~-g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
|-+.+.+ ....-+||=|+.+.--|+.|+..+
T Consensus 335 FDve~~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 335 FDVEVEERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred eeeeecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 9998653 238899999999999999998653
No 145
>KOG0995|consensus
Probab=79.53 E-value=2.1e+02 Score=37.29 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=25.2
Q ss_pred CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 985 EMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAI 1022 (2301)
Q Consensus 985 ~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L 1022 (2301)
+-+++.++.+-+.-..+.++|..++..++.+.+.+-.+
T Consensus 328 ~iS~~dve~mn~Er~~l~r~l~~i~~~~d~l~k~vw~~ 365 (581)
T KOG0995|consen 328 GISGEDVERMNLERNKLKRELNKIQSELDRLSKEVWEL 365 (581)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45666677777777777777777777777666554433
No 146
>KOG2996|consensus
Probab=79.04 E-value=2.1 Score=53.23 Aligned_cols=68 Identities=26% Similarity=0.368 Sum_probs=50.2
Q ss_pred CccchhhHhhhcHHHHHHHHHHhcCCCCCCC---CCCC-chhHHHhhHHHHHHHHHh-cccccc-cCCcccccC
Q psy18058 71 CRIGDLYVDLRDGKMLLKLLEVLSGERLPRP---TKGK-MRIHCLENVDKALQFLRE-QRVHLE-NMGSHDIVD 138 (2301)
Q Consensus 71 ~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~---~~~~-~~~~~~~N~~~al~~~~~-~~~~l~-~i~~~di~~ 138 (2301)
..|-||...|+|||.||.|++.|.|..+.-+ .+|. +.+-|+.|++.-|.|+.. .|..-. -..|.|+.|
T Consensus 28 a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLfd 101 (865)
T KOG2996|consen 28 AQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLFD 101 (865)
T ss_pred chHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhhh
Confidence 4577999999999999999999999877532 2343 478999999999999986 444321 134445443
No 147
>KOG1739|consensus
Probab=79.02 E-value=3.3 Score=50.70 Aligned_cols=80 Identities=15% Similarity=0.353 Sum_probs=58.0
Q ss_pred CCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHH
Q psy18058 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMN 2255 (2301)
Q Consensus 2176 ~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~ 2255 (2301)
...|..+|+||..+.|.|||..-.. .. +.+ +.|.|..|.+.... --.+-|-|.+. .+.+.+.+.+.+...
T Consensus 37 i~gwqdRyv~lk~g~Lsyykse~E~--~h--GcR--gsi~l~ka~i~ahE---fDe~rfdIsvn-~nv~~lra~~~~hr~ 106 (611)
T KOG1739|consen 37 IHGWQDRYVVLKNGALSYYKSEDET--EH--GCR--GSICLSKAVITAHE---FDECRFDISVN-DNVWYLRAQDPDHRQ 106 (611)
T ss_pred cccccceEEEEcccchhhhhhhhhh--hc--ccc--eeeEeccCCccccc---chhheeeeEec-cceeeehhcCcHHHH
Confidence 4579999999999999999987622 11 112 36777766655432 23578888876 568888899999999
Q ss_pred HHHHHHHHHH
Q psy18058 2256 KWVTALSNVC 2265 (2301)
Q Consensus 2256 ~W~~~i~~~~ 2265 (2301)
.|+.+|.-.-
T Consensus 107 ~w~d~L~wmk 116 (611)
T KOG1739|consen 107 QWIDALEWMK 116 (611)
T ss_pred HHHHHHHHHh
Confidence 9999996543
No 148
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=78.97 E-value=3.8e+02 Score=40.03 Aligned_cols=51 Identities=20% Similarity=0.194 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhcHHHHHHhHHHHh
Q psy18058 1778 TIAEWKDGLNEAWQDLLELIETRTQMLVASRE--LHKFFHDCKDILGRISEKH 1828 (2301)
Q Consensus 1778 ~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~--~~~f~~d~~e~l~wi~ek~ 1828 (2301)
.+.++.+.|+...++|.+...+-...+...-. ...|...++.+-.-+.+.-
T Consensus 974 ~~~~r~~~l~~~~~dl~~a~~~l~~~i~~~d~~~~~~f~~~f~~In~~F~~if 1026 (1163)
T COG1196 974 EVEERYEELKSQREDLEEAKEKLLEVIEELDKEKRERFKETFDKINENFSEIF 1026 (1163)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555655555555555555555544433 3445554555544444443
No 149
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=78.48 E-value=4e+02 Score=40.06 Aligned_cols=50 Identities=12% Similarity=0.190 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhchHHHHHhHHHh
Q psy18058 1565 EFTSLIEDLMDRWQQLKKAVDERRSKLIQSEK--AQQYLFDASEAESWMSEQ 1614 (2301)
Q Consensus 1565 ~I~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~--~qqf~~~~~e~~~Wl~e~ 1614 (2301)
.+..++..|...+++|......-...+..-.. ...|......+...+.+.
T Consensus 983 ~~~~~~~~l~~q~~dl~~~~~~l~~~i~~l~~~~~~~f~~~f~~~~~~f~~~ 1034 (1164)
T TIGR02169 983 EVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINENFNEI 1034 (1164)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555666666665555554444433222 244555545554444444
No 150
>KOG1117|consensus
Probab=78.43 E-value=2.6 Score=54.95 Aligned_cols=96 Identities=18% Similarity=0.295 Sum_probs=67.8
Q ss_pred CCccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCC
Q psy18058 2152 ADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231 (2301)
Q Consensus 2152 ~~~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~ 2231 (2301)
-.++.+.|||.+- -++ +..-..+.|+-+.|..+.+|...+.+ -+.++|++........ -..
T Consensus 84 isp~~~~gwldk~---~pq----g~~~~qkr~vkf~~~s~~yf~~~k~p--------y~k~~i~va~is~v~~----~gd 144 (1186)
T KOG1117|consen 84 ISPVIKSGWLDKL---SPQ----GEYPFQKRWVKFDGSSLEYFLSPKDP--------YSKGPIPVAAISAVRN----FGD 144 (1186)
T ss_pred cCchhhcchhhcc---CcC----cccccCccceecCCCCccccCCCCCC--------CCCCceeeehhhhhhh----ccC
Confidence 3457789999553 122 34556788888899999999877733 1223555544333332 246
Q ss_pred ceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2232 ~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
+.|.|+|... +|.|.+.++.+...|+..++++...
T Consensus 145 ~kfevitn~r-~fvfr~e~~~~r~~w~s~l~s~~~~ 179 (1186)
T KOG1117|consen 145 NKFEVITNQR-TFVFRQESEGERFIWVSPLQSALKE 179 (1186)
T ss_pred ceEEEEecce-EEEEecCCcccceeeechhhhcchh
Confidence 8899998764 9999999999999999999887653
No 151
>KOG0705|consensus
Probab=77.81 E-value=2.1 Score=53.41 Aligned_cols=35 Identities=26% Similarity=0.530 Sum_probs=32.0
Q ss_pred eEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2233 VFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2233 vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
.|.+....|..|.|-|.+.++...||++|..-|-.
T Consensus 447 ~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIla 481 (749)
T KOG0705|consen 447 CFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILA 481 (749)
T ss_pred eEEEeccccchhhhhhcchhhHHHHHHHHHHHHHH
Confidence 89999889999999999999999999999887743
No 152
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=76.67 E-value=3.8e+02 Score=38.83 Aligned_cols=66 Identities=20% Similarity=0.310 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1520 SLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVD 1585 (2301)
Q Consensus 1520 ~l~~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~~~I~~~l~~L~~~w~~L~~~~~ 1585 (2301)
.+........++..+...+......+..+......+..........++.+...+......+...+.
T Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 378 (908)
T COG0419 313 LLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELE 378 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666666666555555555555555433333444555555555555555555554
No 153
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=75.81 E-value=9.3 Score=36.58 Aligned_cols=86 Identities=20% Similarity=0.249 Sum_probs=51.6
Q ss_pred ceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEE
Q psy18058 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235 (2301)
Q Consensus 2156 ~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~ 2235 (2301)
.+.|.+.++. + =.++++=++|++.-=.||=|.... ..+++-|++-.+-.++. +..+.|.
T Consensus 2 l~~g~v~Kr~---------g-lf~kkR~LiLTd~PrL~yvdp~~~------~~KgeIp~s~~~l~v~~-----~~~~~F~ 60 (89)
T cd01262 2 LKIGAVKKRK---------G-LFAKKRQLILTNGPRLIYVDPVKK------VVKGEIPWSDVELRVEV-----KNSSHFF 60 (89)
T ss_pred ceeeeeeehh---------c-cccceeeEEEecCceEEEEcCCcC------eEEeEecccccceEEEE-----ecCccEE
Confidence 3567776551 1 256888899996555566665522 22333333321112222 4458899
Q ss_pred EEeCCCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2236 l~~~~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
+.|++ ++|.|.- .......|+.+|..+
T Consensus 61 I~Tp~-rty~leD-~~~~a~~W~~~I~~~ 87 (89)
T cd01262 61 VHTPN-KVYSFED-PKGRASQWKKAIEDL 87 (89)
T ss_pred EECCC-ceEEEEC-CCCCHHHHHHHHHHH
Confidence 99885 5888853 357788899999875
No 154
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=74.70 E-value=2e+02 Score=34.73 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcccC---CCCChhHHHHHHHhhhhhHH
Q psy18058 820 VLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMV---PGKDIEDVEIMKHRYDGFDK 896 (2301)
Q Consensus 820 v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~Wl~e~e~~l~~~~---~~~~~e~~~~l~~~~~~l~~ 896 (2301)
+..+...+...+......+..-+..|...-.+.++|...++-..--.....-+.... .......+..++++++.++.
T Consensus 95 L~~~~~~le~~L~~~~e~v~qLrHeL~~kdeLL~~ys~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~le~Lq~Klk~LEe 174 (306)
T PF04849_consen 95 LSERNEALEEQLGAALEQVEQLRHELSMKDELLQIYSNDDEESEPESSESTPLRRNESSLSSQKCIQLEALQEKLKSLEE 174 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHhhhcccccCCCccccccccccccccchhHHHHHHHHHHHHH
Confidence 345555555555555555555555555555677777765431000000000000000 01233456777888888777
Q ss_pred HHhhhhhhHHHHH
Q psy18058 897 EMNANASRVAVVN 909 (2301)
Q Consensus 897 el~~~~~~v~~l~ 909 (2301)
+-..++.....+.
T Consensus 175 EN~~LR~Ea~~L~ 187 (306)
T PF04849_consen 175 ENEQLRSEASQLK 187 (306)
T ss_pred HHHHHHHHHHHhh
Confidence 7665555444443
No 155
>PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A.
Probab=73.87 E-value=2.3e+02 Score=34.87 Aligned_cols=143 Identities=17% Similarity=0.243 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHH-HHHHHHHHHHHH
Q psy18058 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHV-TLLWERFKEFDR 1748 (2301)
Q Consensus 1670 ~~i~~~~~~l~~~~~~L~~~~~~R~~~Le~~~~~~qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v-~~l~~k~~~f~~ 1748 (2301)
......+..|+.....|...-.+|...+.+.....+ ...+..+...+.. .-+.+.+.+ ..-+++|+.+..
T Consensus 137 ~~~~~~i~~L~~ll~~l~~l~~eR~~~~~~lk~~~~-~d~i~~~l~~~~~--------~~~~~~~~lf~~eL~k~~~~~~ 207 (296)
T PF13949_consen 137 PQVSEVIRQLRELLNKLEELKKEREELLEQLKEKLQ-NDDISKLLSELNK--------NGSADFEALFEEELKKFDPLQN 207 (296)
T ss_dssp GSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH--------SSS--HHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHhhc--------cCCccHHHHHHHHHHHHHHHHH
Confidence 334566777888888888888888887776655332 2223333332221 112355554 556667888887
Q ss_pred HHhhhh---chHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHH
Q psy18058 1749 DTEAIG---TERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRIS 1825 (2301)
Q Consensus 1749 e~~~~~---~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ 1825 (2301)
.|.... ...+..+...-..+......+ ... ..-+.....|...+....+......+=-+||.++...+.-+.
T Consensus 208 ~i~~~~~~Q~~ll~~i~~~~~~~~~~~~~~--~~~---~~r~~~~~~l~~a~~~y~el~~~l~eG~~FY~~L~~~~~~l~ 282 (296)
T PF13949_consen 208 RIQQNLSKQEELLQEIQEANEEFAQSRKSD--QEQ---KERESALQRLEAAYDAYKELSSNLEEGLKFYNDLLEILNKLQ 282 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTS--S--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHH---HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 775432 222333333333443322111 111 334445556666666666666666666678888777666555
Q ss_pred H
Q psy18058 1826 E 1826 (2301)
Q Consensus 1826 e 1826 (2301)
.
T Consensus 283 ~ 283 (296)
T PF13949_consen 283 Q 283 (296)
T ss_dssp H
T ss_pred H
Confidence 4
No 156
>KOG0933|consensus
Probab=73.06 E-value=3.9e+02 Score=37.23 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHhhccC----CC-CCCHHHHHHHHHHHHHHHHhHHhh-HHHHHHHHHhchhhccCCCCCCChhhHHH
Q psy18058 1070 DLDHFQVWLTKTQTDVASE----DT-PSSLADAEKLLNQHQAIREEIDNY-TEDYKKMMDYGEKVTAEPSTHDDPQYMFL 1143 (2301)
Q Consensus 1070 ~~~~l~~Wl~~~e~~l~~~----~~-~~~~~~~e~ll~~h~~l~~ei~~~-~~~~~~l~~~g~~L~~~~~~~~~~~~~~l 1143 (2301)
.+..=..||.+-..-+... ++ ..++..+...|.+.++....+... .+..-.+.+.++ .....+
T Consensus 931 ~l~~k~~wi~~ek~~fgk~gt~yDf~~~~p~~are~l~~Lq~k~~~l~k~vn~~~m~mle~~E-----------~~~~~l 999 (1174)
T KOG0933|consen 931 KLLKKHEWIGDEKRLFGKKGTDYDFESYDPHEAREELKKLQEKKEKLEKTVNPKNMDMLERAE-----------EKEAAL 999 (1174)
T ss_pred HHHHhccchhHHHHhhcCCCCccccccCCHhHHHHHHHHhhHHHHHHHhhcCHHHHHHHHHHH-----------HHHHHH
Confidence 3334446887655544322 12 557888888888877766655432 111112222111 112234
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HHHHHHHhHHHHH-HHHHHHhhhhccCCCCC
Q psy18058 1144 RERLKALRDGWEELHKMWENRQQLLSQSL--NLQMFNRDAKQAE-VLLSQQEHVLSKDETPV 1202 (2301)
Q Consensus 1144 ~~~l~~L~~~w~~L~~~~~~R~~~L~~~l--~lq~f~~~~~~~~-~wL~~~E~~L~~~~~~~ 1202 (2301)
..+...+......+......-...=.+.+ .|.....|...+. ..|-...+.|.+++-.+
T Consensus 1000 k~k~~~Ie~Dk~kI~ktI~~lDe~k~~~L~kaw~~VN~dFG~IFs~LLPga~AkL~Ppeg~~ 1061 (1174)
T KOG0933|consen 1000 KTKKEIIEKDKSKIKKTIEKLDEKKREELNKAWEKVNKDFGSIFSTLLPGAMAKLEPPEGKT 1061 (1174)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCccccccCCCCCc
Confidence 44444444444444443333222222222 2444566665543 45556666675554433
No 157
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=71.56 E-value=11 Score=36.21 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=49.5
Q ss_pred ceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVT 2259 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~ 2259 (2301)
+.+.+.|-++.|.+-+=++.... ....+.-.-.|+|..-.+... .|++....|..|.|-|.|..|...|+.
T Consensus 18 K~R~~FLFnDlLvc~~ik~~~~~-k~~kY~~~w~IPL~dl~~~~~--------~~~~~~~~~KSf~~~asS~~Er~eW~~ 88 (96)
T cd01228 18 KLRHLFLFTDVLLCAKLKKTSRG-KHQQYDCKWYIPLADLSFPSE--------PFRIHNKNGKSYTFLLSSDYERSEWRE 88 (96)
T ss_pred cceEEEeeccEEEEEEeeeccCc-cccccceeEEEEhHHheecch--------hhhccccCCceEEEEecCHHHHHHHHH
Confidence 55667777877766443321111 112344444677765544332 377776679999999999999999999
Q ss_pred HHHH
Q psy18058 2260 ALSN 2263 (2301)
Q Consensus 2260 ~i~~ 2263 (2301)
+|+.
T Consensus 89 hI~~ 92 (96)
T cd01228 89 SIQK 92 (96)
T ss_pred HHHH
Confidence 9975
No 158
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=71.01 E-value=3.4e+02 Score=35.72 Aligned_cols=28 Identities=7% Similarity=0.332 Sum_probs=12.5
Q ss_pred HHHhhhhhHHHHhhhhhhHHHHHHHHHH
Q psy18058 887 MKHRYDGFDKEMNANASRVAVVNQLARQ 914 (2301)
Q Consensus 887 l~~~~~~l~~el~~~~~~v~~l~~~a~~ 914 (2301)
+..+.+.+..++.........+......
T Consensus 169 l~~~v~~l~~eL~~~~ee~e~L~~~~ke 196 (546)
T PF07888_consen 169 LREEVERLEAELEQEEEEMEQLKQQQKE 196 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444443333
No 159
>PF15450 DUF4631: Domain of unknown function (DUF4631)
Probab=67.12 E-value=3.7e+02 Score=34.68 Aligned_cols=241 Identities=17% Similarity=0.190 Sum_probs=136.8
Q ss_pred chHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H--HHHhhhcHHHHHHhHH
Q psy18058 1755 TERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASR-------E--LHKFFHDCKDILGRIS 1825 (2301)
Q Consensus 1755 ~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-------~--~~~f~~d~~e~l~wi~ 1825 (2301)
++++.++....+.....-..+-..+.++...|++.-..|...+..-+..|..-. . -+-+...+.++-..+.
T Consensus 239 Ee~l~al~gq~ev~~~~~~~E~~~l~eq~~~ld~AV~~Ltk~v~~~q~sL~kvl~aE~kaR~~k~~~e~sk~eeL~~~L~ 318 (531)
T PF15450_consen 239 EERLRALQGQQEVGLGGIQSEESKLLEQCRKLDEAVAQLTKFVQQNQKSLNKVLNAEQKARDAKEKLEESKAEELATKLQ 318 (531)
T ss_pred HHHHHHHHhhHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHhhHHHHHHHHH
Confidence 345555544333222222233345677777788888777777777766665433 2 3446677788888888
Q ss_pred HHhhhCccccCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy18058 1826 EKHHAMSDELGR----DAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQN 1901 (2301)
Q Consensus 1826 ek~~~l~~~~g~----d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~ 1901 (2301)
+.-..++...+. .-..+..++.+-..++.-+..+..+|..|.+....|..... .....+..++.++...|..-.
T Consensus 319 ~~lea~q~agkla~Qe~~~~ld~LqEksqile~sv~~l~~~lkDLd~~~~aLs~rld-~qEqtL~~rL~e~~~e~~~~~- 396 (531)
T PF15450_consen 319 ENLEAMQLAGKLAQQETQSELDLLQEKSQILEDSVAELMRQLKDLDDHILALSWRLD-LQEQTLNLRLSEAKNEWESDE- 396 (531)
T ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHH-
Confidence 875554322111 12346677788888888888888888888887777765543 355778888888887777632
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHH------------HHHHHHHhhhhh
Q psy18058 1902 ACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQ------------SLKAEIDTREDN 1969 (2301)
Q Consensus 1902 ~~~~R~~~L~~a~~~~~f~~~~~dl~~Wl~~~~~~~~~~e~~~d~~~~e~ll~~h~------------~~~~ei~~~~~~ 1969 (2301)
+..|+.-.+++ .+...-+.++...+. ++|.|+.++..-..-|+ ....+|.+-...
T Consensus 397 -----r~~lekl~~~q------~e~~~~l~~v~eKVd--~LpqqI~~vs~Kc~~~Ksd~d~kIdtE~k~R~~eV~~vRqE 463 (531)
T PF15450_consen 397 -----RKSLEKLDQWQ------NEMEKHLKEVQEKVD--SLPQQIEEVSDKCDLHKSDSDTKIDTEGKAREREVGAVRQE 463 (531)
T ss_pred -----HHHHHHHHHHH------HHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHhhhhhhccHHHHHHHHHHHHHHHH
Confidence 22222211111 122223333333444 66777766666554443 445566666666
Q ss_pred HHHHHHHHHHHHhcCCC-CchHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1970 FTACISLGKELLSRNHY-ASNEIKEKLVGLSNQRNALLHRWEER 2012 (2301)
Q Consensus 1970 ~~~~~~~g~~L~~~~~~-~s~eI~~~l~~L~~~~~~l~~~w~~r 2012 (2301)
|.++...-+-+....+. --.+|+.+|. ......|......-
T Consensus 464 La~lLssvQ~~~e~~~~rkiaeiqg~l~--~~qi~kle~siq~n 505 (531)
T PF15450_consen 464 LATLLSSVQLLKEDNPGRKIAEIQGKLA--TNQIMKLENSIQTN 505 (531)
T ss_pred HHHHHHHHHHhcCCChhhhHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 66666655554333322 1237777777 44444444443333
No 160
>KOG2129|consensus
Probab=66.55 E-value=3.2e+02 Score=33.67 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy18058 1842 VNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLI 1921 (2301)
Q Consensus 1842 v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~~~~~f~~ 1921 (2301)
|..++++.+.++.+-...+..+.++..++-+|.... =+....-|+..|+.+ .+|++-.+
T Consensus 160 vnKlm~ki~Klen~t~~kq~~leQLRre~V~lentl-------EQEqEalvN~LwKrm--------dkLe~ekr------ 218 (552)
T KOG2129|consen 160 VNKLMNKIRKLENKTLLKQNTLEQLRREAVQLENTL-------EQEQEALVNSLWKRM--------DKLEQEKR------ 218 (552)
T ss_pred HHHHHHHHHHhhhhhHHhhhhHHHHHHHHHHHhhHH-------HHHHHHHHHHHHHHH--------HHHHHHHH------
Confidence 556667777777766666666777777776664211 122334466777653 34444322
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCChh--------hHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy18058 1922 MVRTLMLWMDDVVRQMNTSEKARDVS--------GVELLMNNHQSLKAEIDTREDNFTACISLG 1977 (2301)
Q Consensus 1922 ~~~dl~~Wl~~~~~~~~~~e~~~d~~--------~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g 1977 (2301)
-|..-++ .-+.....|+|++ .+..++..-+-+++||+.............
T Consensus 219 ---~Lq~KlD---qpvs~p~~prdia~~~~~~gD~a~~~~~hi~~l~~EveRlrt~l~~Aqk~~ 276 (552)
T KOG2129|consen 219 ---YLQKKLD---QPVSTPSLPRDIAKIPDVHGDEAAAEKLHIDKLQAEVERLRTYLSRAQKSY 276 (552)
T ss_pred ---HHHHHhc---CcccCCCchhhhhcCccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1234455666655 445555555666999998887776665554
No 161
>PF15404 PH_4: Pleckstrin homology domain
Probab=66.18 E-value=5.7 Score=43.95 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=27.0
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecC
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQ 2197 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~ 2197 (2301)
+.|+|+.| ++| ...++.||+||+.|.|..|..-
T Consensus 1 ~sG~LY~K-----~~k---hs~F~~~~vvL~~G~Li~f~~~ 33 (185)
T PF15404_consen 1 MSGYLYQK-----PRK---HSTFKKYFVVLIPGFLILFQLF 33 (185)
T ss_pred CCceeeec-----CCC---CCCceEEEEEEeCCEEEEEEEE
Confidence 45899888 444 4679999999999999999874
No 162
>KOG3000|consensus
Probab=64.41 E-value=12 Score=44.53 Aligned_cols=95 Identities=17% Similarity=0.290 Sum_probs=65.5
Q ss_pred HHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCccccccCc-----cCHHHHHHHHHHHHHHhcCCccc
Q psy18058 174 KDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSK-----SNAIYNLNNAFTVAEDKLGLTKL 248 (2301)
Q Consensus 174 ~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~-----~~~~~n~~~a~~~a~~~lgi~~~ 248 (2301)
.--+|.|+|..... .-.+|... .-|-|+|-|.+...|+.|+...++- -..+.|++.--+.. ..+||.+.
T Consensus 17 R~E~laW~N~~l~~-n~~kIEe~----~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f-~klgi~k~ 90 (295)
T KOG3000|consen 17 RLEILAWINDLLQL-NLTKIEEL----CTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCF-NKLGIDKV 90 (295)
T ss_pred hHHHHHHHHhhhhc-chhhhhhh----cccchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHH-HhcCCccc
Confidence 34678999966532 12234343 4488999999999999988776642 24555655544444 69999999
Q ss_pred cccccccccCCChhhHHHHHHHHHHHhh
Q psy18058 249 LDAEDIFVEQPDEKSIITYVVTYYHYFS 276 (2301)
Q Consensus 249 l~~edv~~~~~de~si~~yv~~~~~~~~ 276 (2301)
+++++++-+.+ .-++.|+-.|.++|-
T Consensus 91 v~vdkLvKg~~--qDNlEF~qWfkkffd 116 (295)
T KOG3000|consen 91 VDVDKLVKGPF--QDNLEFLQWFKKFFD 116 (295)
T ss_pred ccHHHHhcccc--cchHHHHHHHHHHhh
Confidence 99999887766 556666666666554
No 163
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=64.28 E-value=2.5e+02 Score=35.35 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1033 IRERIKQIRIIWEQLTQMLKERDAKL 1058 (2301)
Q Consensus 1033 i~~~l~~L~~~w~~L~~~~~~R~~~L 1058 (2301)
.+.++.+++..+......+.++...|
T Consensus 278 ~~~~ls~~~~~y~~~s~~V~~~t~~L 303 (359)
T PF10498_consen 278 AQDELSEVQEKYKQASEGVSERTREL 303 (359)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 44445555555555555555444444
No 164
>KOG0971|consensus
Probab=64.12 E-value=5.3e+02 Score=35.37 Aligned_cols=71 Identities=14% Similarity=0.207 Sum_probs=37.6
Q ss_pred HHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy18058 1015 LEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE-AGDLHRFLRDLDHFQVWLTKTQTDV 1085 (2301)
Q Consensus 1015 L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~-a~~~~~f~~~~~~l~~Wl~~~e~~l 1085 (2301)
+...-+.|.+.+.+..-.+++.++.++..-..|......-...+-. ....-+|-.-+..|.+-+.+...+.
T Consensus 477 lee~~EQL~Esn~ele~DLreEld~~~g~~kel~~r~~aaqet~yDrdqTI~KfRelva~Lqdqlqe~~dq~ 548 (1243)
T KOG0971|consen 477 LEEMNEQLQESNRELELDLREELDMAKGARKELQKRVEAAQETVYDRDQTIKKFRELVAHLQDQLQELTDQQ 548 (1243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444445555555555567777777766655555543332222222 1224466666666666666554443
No 165
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=63.92 E-value=16 Score=50.77 Aligned_cols=95 Identities=17% Similarity=0.337 Sum_probs=46.1
Q ss_pred cHHHHHHHHHHhHhcCCCCcccccCCCCccchhhHHHHHhhhCCCCcccc---ccCc---cC---HHHHHHHHHHH----
Q psy18058 172 SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFE---KLSK---SN---AIYNLNNAFTV---- 238 (2301)
Q Consensus 172 ~~~~~ll~W~~~~~~~~~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~---~~~~---~~---~~~n~~~a~~~---- 238 (2301)
..-+.|+.|++.-.. +-++.++. ++.||++|.-+++.+.|..|+-. .+.. .+ ...|+...+..
T Consensus 7 ~l~~~Lv~Wv~tf~~---~~~~~~~~-dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~y 82 (713)
T PF05622_consen 7 ELCDSLVTWVQTFNL---SAPCSSYE-DLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKLLRNIKSY 82 (713)
T ss_dssp HHHHHHHHHHTT------SS---SHH-HHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCC---CCCcCCHH-HccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 345789999986321 23455544 59999999999999999988633 2221 12 45676655443
Q ss_pred HHHhcCCcc--cccccc-ccccCCChhhHHHHHHH
Q psy18058 239 AEDKLGLTK--LLDAED-IFVEQPDEKSIITYVVT 270 (2301)
Q Consensus 239 a~~~lgi~~--~l~~ed-v~~~~~de~si~~yv~~ 270 (2301)
-.+.||-+. +..|.= ....+||..-+...+..
T Consensus 83 y~e~L~~~i~~~~~Pd~~~Iae~~d~~El~kLL~L 117 (713)
T PF05622_consen 83 YQEELGQQISEMPLPDLQAIAENSDPEELKKLLQL 117 (713)
T ss_dssp HHTTT-----TTT---HHHHHTT--HHHHHHHHHH
T ss_pred HHHHcCCCcCcCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 334455432 122221 12335665555544443
No 166
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []. It is also thought to modulate cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organisation during mitosis. Dynamitin is also involved in anchoring microtubules to centrosomes and may play a role in synapse formation during brain development []. ; GO: 0007017 microtubule-based process, 0005869 dynactin complex
Probab=62.19 E-value=4.4e+02 Score=33.80 Aligned_cols=56 Identities=11% Similarity=0.157 Sum_probs=28.2
Q ss_pred HHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHH
Q psy18058 884 VEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGL 940 (2301)
Q Consensus 884 ~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l 940 (2301)
-+...++|..+..|+......|..+......-- ........+...+..|......+
T Consensus 89 ~Es~~~kl~RL~~Ev~EL~eEl~~~~~~~~~~~-~e~~~~~~l~~~~~~L~~~L~~l 144 (388)
T PF04912_consen 89 KESPEQKLQRLRREVEELKEELEKRKADSKESD-EEKISPEELAQQLEELSKQLDSL 144 (388)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhcccccc-cccCChhhHHHHHHHHHHHHHHh
Confidence 344556677777777766666666544332211 11122233455555555555554
No 167
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=61.88 E-value=8.2e+02 Score=36.80 Aligned_cols=8 Identities=25% Similarity=0.468 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q psy18058 1640 LELAVEDY 1647 (2301)
Q Consensus 1640 l~~el~~~ 1647 (2301)
+...|+.|
T Consensus 977 lg~aiee~ 984 (1179)
T TIGR02168 977 LENKIKEL 984 (1179)
T ss_pred HHHHHHHc
Confidence 33344444
No 168
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in Saccharomyces cerevisiae and higher eukaryotes. In Saccharomyces cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated [].; PDB: 1GO4_F 4DZO_A.
Probab=61.21 E-value=39 Score=47.30 Aligned_cols=80 Identities=16% Similarity=0.244 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHHHhhCCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHhc
Q psy18058 1315 KWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELA-ELIGPKISDLGQQFDDLETTTKDKGERLFDS--NREVLIHQT 1391 (2301)
Q Consensus 1315 ~l~khq~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~-~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a--~~~~~f~~~ 1391 (2301)
+...+.++.+|.......+..+...+..-....|-.. ......+.+|...-. ....|..+|.+. .+...|...
T Consensus 564 k~~~l~~L~~En~~L~~~l~~le~~~~~~~~~~p~~~~~~~~~e~~~l~~~~~----~~ekr~~RLkevf~~ks~eFr~a 639 (722)
T PF05557_consen 564 KKSTLEALQAENEDLLARLRSLEEGNSQPVDAVPTSSLESQEKEIAELKAELA----SAEKRNQRLKEVFKAKSQEFREA 639 (722)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTT----------------HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccchhhhhhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777777766666544332222211111111 011112223322211 234455566665 235667777
Q ss_pred HHHHHHh
Q psy18058 1392 CDDIDSW 1398 (2301)
Q Consensus 1392 ~~~l~~W 1398 (2301)
|-.+.-|
T Consensus 640 v~~llGy 646 (722)
T PF05557_consen 640 VYSLLGY 646 (722)
T ss_dssp HHHHHSE
T ss_pred HHHHhcc
Confidence 7777666
No 169
>KOG0516|consensus
Probab=61.17 E-value=7.8e+02 Score=36.33 Aligned_cols=255 Identities=16% Similarity=0.119 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHhhccccccCChhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHHHH--H
Q psy18058 534 EMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIV--E 611 (2301)
Q Consensus 534 e~~~l~~Wl~e~~~~l~s~~~g~dl~~v~~ll~kh~~l~~di~~~~~~v~~l~~~a~~l~~~~~~~~~~~~~~~~i~--~ 611 (2301)
.+.+...|.............+.++..++.-+..++....++..+-.+... +. . ..+..+. .
T Consensus 111 ~~~e~~~~~~~~~~~~~~~~~~~~l~n~q~~l~~~k~~~~el~~~~~~~~~-------~~---~------~~~~~~l~~~ 174 (1047)
T KOG0516|consen 111 EVEELLVAVRKQEPEQDRQERLHDLENVQAALTALKEDLAELVNFLIRDAE-------IK---L------GNPELGLGLI 174 (1047)
T ss_pred HHHHhhhhhhhhhHHHHHHHHHhhHHHHHhhhccchHHHHHHHHhhcccch-------hh---c------cchhhhhhhH
Confidence 444555565554444444445556666666666666665555433311111 11 0 0111111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhH
Q psy18058 612 RVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHE 691 (2301)
Q Consensus 612 ~l~~L~~~~~~L~~~~~~R~~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~ 691 (2301)
..-.+...|..+...+..+...+. .+..+...+.....|+.++...+...+..............+..+..++....
T Consensus 175 ~ei~l~~Q~~~ll~~s~~~~~s~~---~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 251 (1047)
T KOG0516|consen 175 WEIILHFQYVKLLAEASARLQSLD---SLQGSVSRASAELMWLFEAREELLQFDWSDRNLNGAARSEYSEVLMRELEQLV 251 (1047)
T ss_pred HHHHHHHHHHHhhhhHHhhccchH---HHHHhHhhhhHhhhhHHHHHHHHhccCChhhhhhHHHHHHHHHHHHHhhHHHH
Confidence 223344555444444444444444 67777888899999999998877665554333333355556677788888888
Q ss_pred HHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc--
Q psy18058 692 SQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSS-- 769 (2301)
Q Consensus 692 ~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a~~~~qf~~~~~el~~Wl~e~~~~l~~-- 769 (2301)
.....+...|..+....|++...+...+..+...|....+.+.+....+.....+++|+.++.....-+......+..
T Consensus 252 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~l~~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~sl~~~~~~k~ 331 (1047)
T KOG0516|consen 252 LRKNDLEVVGDQLLLGRHPARISREAYLAALLAQWSIELELEICAERHLKHNAAYFEFFEDVRSAEDELASLRDALDEKY 331 (1047)
T ss_pred HHHHHhhccchHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhHHhhhhhHHHHHHhhhhhhhc
Confidence 888888888888888999999999999999999999999999999999999999999999988887777666544443
Q ss_pred -cCCCCChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHH
Q psy18058 770 -EDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQA 807 (2301)
Q Consensus 770 -~~~g~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~ 807 (2301)
+++.........++.........+..+...+..+....
T Consensus 332 ~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~l~~~~ 370 (1047)
T KOG0516|consen 332 SPDRSSSLLRLLDLLPEEEKEKCVLPNQFEEVRGLQGKE 370 (1047)
T ss_pred cCCccccchhhhhhchHHHHHHHhhhhHHHHHHHHHhhh
Confidence 23333344444555555555555555544444444333
No 170
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5
Probab=61.14 E-value=5.7e+02 Score=34.76 Aligned_cols=406 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhcHHHHHHhHHHHHHhhccCCCCCC
Q psy18058 1336 VQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDS-NREVLIHQTCDDIDSWMNELEKQIENEDTGSD 1414 (2301)
Q Consensus 1336 l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a-~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~d 1414 (2301)
+.+.-.+|-.+....+..++.....+..+-..+...+..-....... .+...+.+++.+|..=+...- .+..+..
T Consensus 2 l~e~l~qlq~Erd~ya~~lk~e~a~~qqr~~qmseev~~L~eEk~~~~~~V~eLE~sL~eLk~q~~~~~----~~~~pa~ 77 (617)
T PF15070_consen 2 LMESLKQLQAERDQYAQQLKEESAQWQQRMQQMSEEVRTLKEEKEHDISRVQELERSLSELKNQMAEPP----PPEPPAG 77 (617)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC----Ccccccc
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy18058 1415 LASVN-ILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQ 1493 (2301)
Q Consensus 1415 l~~v~-~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s~~~~q 1493 (2301)
+..+. .+-.+...|..++......++....--..|.. ....-.+++..+..++..+.+...++...|+..-.
T Consensus 78 pse~E~~Lq~E~~~L~kElE~L~~qlqaqv~~ne~Ls~----L~~EqEerL~ELE~~le~~~e~~~D~~kLLe~lqs--- 150 (617)
T PF15070_consen 78 PSEVEQQLQAEAEHLRKELESLEEQLQAQVENNEQLSR----LNQEQEERLAELEEELERLQEQQEDRQKLLEQLQS--- 150 (617)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---
Q ss_pred HHhhHHHHHHHHhhhcccccCcccCCCHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCC---ChHHHHHHH
Q psy18058 1494 FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHE---DSAEFTSLI 1570 (2301)
Q Consensus 1494 f~~d~~~~~~Wl~e~~~~a~s~~~g~~l~~vq~l~~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~---~~~~I~~~l 1570 (2301)
+-.++......+..|...+...+..+-.+....-.|...-.. -...+..++
T Consensus 151 --------------------------dk~t~SRAlsQN~eLK~QL~Elq~~Fv~ltne~~elt~~lq~Eq~~~keL~~kl 204 (617)
T PF15070_consen 151 --------------------------DKATASRALSQNRELKEQLAELQDAFVKLTNENMELTSALQSEQHVKKELQKKL 204 (617)
T ss_pred --------------------------cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHH--------------HHHHHHH-HHHHHhchHHHHHhHHHhhhhhcc--ccCCCCHHHHHHH
Q psy18058 1571 EDLMDRWQQLKKAVDERRS--------------KLIQSEK-AQQYLFDASEAESWMSEQELYMMV--EDRGKDEISTQNL 1633 (2301)
Q Consensus 1571 ~~L~~~w~~L~~~~~~R~~--------------~L~~a~~-~qqf~~~~~e~~~Wl~e~~~~l~~--~~~~~d~~~~~~l 1633 (2301)
.+|...|..++..+..+.. .|..+.. +++.-.+-..+-.=+--+...|.. ..-...-..+...
T Consensus 205 ~~l~~~l~~~~e~le~K~qE~~~Lq~q~dq~~~~Lqqy~a~~q~l~~e~e~L~~q~l~Qtql~d~lq~eE~q~~~~~E~~ 284 (617)
T PF15070_consen 205 GELQEKLHNLKEKLELKSQEAQSLQEQRDQYLGHLQQYVAAYQQLASEKEELHKQLLQQTQLMDRLQHEESQGKVQLEMA 284 (617)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1634 MKKHETLELAVEDYADTIRQLGETARQLTSEMH-----------------PESDQIALKQSQVDKLYAGLKDLAGERRAK 1696 (2301)
Q Consensus 1634 l~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~-----------------~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~ 1696 (2301)
.+.++..+..|+.....-..|...-..+...+. +..+.--.....+...++.....+.+=+.+
T Consensus 285 ~~ELq~~qe~Lea~~qqNqqL~~qls~~~~~~eg~~~~~~~~~ee~~~~~~~ipEd~es~E~m~~f~~~a~~~~eeEr~~ 364 (617)
T PF15070_consen 285 HQELQEAQEHLEALSQQNQQLQAQLSLMALPGEGDGLESESEEEEAPQPMPSIPEDLESREAMVEFFNSALAQAEEERAR 364 (617)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCCCCcccccccccccccCcCcccccccccHHHHHHHHHHHHhhHHHHHHH
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHhhhhhccccCCCCh----------HHHHHHHHHHHHHHHHHhhhhchHHHHHHHH
Q psy18058 1697 LDEALKLF--MLNREVDDLEQWIAEREVVAGSHELGQDY----------DHVTLLWERFKEFDRDTEAIGTERVAAVNGI 1764 (2301)
Q Consensus 1697 Le~~~~~~--qf~~e~~~l~~Wi~~~e~~~~s~~~g~d~----------e~v~~l~~k~~~f~~e~~~~~~~rv~~v~~~ 1764 (2301)
|...+.-. .-..-+..+..=-.+.+..+..+..|.|- ...+.|+.+|-+...+. .-..++|..+--.
T Consensus 365 L~~qL~eqk~~~q~L~h~va~~q~e~e~~a~~~~~~~dsV~~E~h~aLq~amekLq~~f~~~~~e~-adl~e~~e~le~~ 443 (617)
T PF15070_consen 365 LRRQLEEQKVQCQHLAHQVASAQKEPEAEAPAPGTGGDSVPGETHQALQEAMEKLQSRFMDLMEEK-ADLKERVEKLEHR 443 (617)
T ss_pred HHHHHHHHHHHHHHhhhccccccccccccccCcccCCCCCCccchHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHH
Q ss_pred HHHHHHcCCCChHHH
Q psy18058 1765 ADQLIAAGHSDSATI 1779 (2301)
Q Consensus 1765 ~~~L~~~~~~~~~~I 1779 (2301)
.-+|-.....-...|
T Consensus 444 ~~ql~~et~ti~eyi 458 (617)
T PF15070_consen 444 FIQLSGETDTIGEYI 458 (617)
T ss_pred HHHhccCccchhhhh
No 171
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=60.98 E-value=3.6e+02 Score=32.44 Aligned_cols=65 Identities=9% Similarity=0.159 Sum_probs=43.6
Q ss_pred HHHHHHhhhhhHhhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q psy18058 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVN 706 (2301)
Q Consensus 640 l~qf~~d~~e~~~Wl~e~e~~l~~~~~g~dl~~v~~~l~khk~le~el~~~~~~l~~l~~~g~~L~~ 706 (2301)
+.+|...+.++..||.+........+ .=.......+..++.-..+|......+...+..|..++.
T Consensus 187 L~~~~~kL~Dl~~~l~eA~~~~~ea~--~ln~~n~~~l~~~~~k~~~l~~~~~~~~~~L~~a~~~L~ 251 (264)
T PF06008_consen 187 LNDYNAKLQDLRDLLNEAQNKTREAE--DLNRANQKNLEDLEKKKQELSEQQNEVSETLKEAEDLLD 251 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788888889999988876554321 112334556666666677777777777777777777654
No 172
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=59.93 E-value=3.9e+02 Score=32.44 Aligned_cols=28 Identities=29% Similarity=0.387 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy18058 1142 FLRERLKALRDGWEELHKMWENRQQLLS 1169 (2301)
Q Consensus 1142 ~l~~~l~~L~~~w~~L~~~~~~R~~~L~ 1169 (2301)
.+...+..|.++|..+..++.+-+..|.
T Consensus 273 ~L~aEL~elqdkY~E~~~mL~EaQEElk 300 (306)
T PF04849_consen 273 QLQAELQELQDKYAECMAMLHEAQEELK 300 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666788888888888888888777664
No 173
>KOG2996|consensus
Probab=59.87 E-value=6.9 Score=48.92 Aligned_cols=68 Identities=21% Similarity=0.418 Sum_probs=55.7
Q ss_pred CCcccccCCCCccchhhHHHHHhhhCCCCccccccCcc------CHHHHHHHHHHHHHHhcCCc--cccccccccc
Q psy18058 189 HNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS------NAIYNLNNAFTVAEDKLGLT--KLLDAEDIFV 256 (2301)
Q Consensus 189 ~~~~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~~~------~~~~n~~~a~~~a~~~lgi~--~~l~~edv~~ 256 (2301)
++-.|-+|.+-.+||..+|.|+|...|..||...+.-. =-..|+.+-..+....||+. -+.+|.|+..
T Consensus 26 ~~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLfd 101 (865)
T KOG2996|consen 26 DSAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLFD 101 (865)
T ss_pred CcchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhhh
Confidence 34557778888999999999999999999998766332 35788888888888999994 6999999863
No 174
>COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=58.76 E-value=5.7e+02 Score=33.95 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHHHHHH
Q psy18058 939 GLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAK 1011 (2301)
Q Consensus 939 ~l~~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~~~~~ 1011 (2301)
.|...+++.+.+|..+.+...|.+....+++-+.-....|.+ ||+.-+.+...+..-.......+.+
T Consensus 890 ~L~dRveE~~E~L~~a~e~~~fI~qhG~tls~LEpia~~Lqs------DPe~~e~L~~~y~qA~~~q~q~~qq 956 (1480)
T COG3096 890 SLADRVEEIRERLDEAQEAARFIQQHGNTLSKLEPIASVLQS------DPEQFEQLKEDYAQAQQMQRQARQQ 956 (1480)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcchHHhhhhHHHHHhC------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777887877888888888887777666666544 7777666665554433333333333
No 175
>PF15450 DUF4631: Domain of unknown function (DUF4631)
Probab=57.20 E-value=5.5e+02 Score=33.29 Aligned_cols=40 Identities=18% Similarity=0.430 Sum_probs=25.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhcChh-hHHHHHHHHH
Q psy18058 999 SGMERDLAAIQAKLDSLEAEAVAIEKEHPE-EAEAIRERIK 1038 (2301)
Q Consensus 999 ~~le~el~~~~~~l~~L~~~a~~L~~~~p~-~~~~i~~~l~ 1038 (2301)
++...+|.+.+..+..+....+-+.+.+|. ....|+.+++
T Consensus 451 k~R~~eV~~vRqELa~lLssvQ~~~e~~~~rkiaeiqg~l~ 491 (531)
T PF15450_consen 451 KAREREVGAVRQELATLLSSVQLLKEDNPGRKIAEIQGKLA 491 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhHHHHHHHHH
Confidence 456677777777777777777777777775 2233444443
No 176
>KOG3958|consensus
Probab=57.16 E-value=3.9e+02 Score=31.55 Aligned_cols=157 Identities=17% Similarity=0.278 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHhhcccC----------CCCCChHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHhhcCh---h
Q psy18058 963 ECRETVSWIEDKKRILQSTD----------SLEMDLTGIMTLQRRLSGMERD-LAAIQAKLDSLEAEAVAIEKEHP---E 1028 (2301)
Q Consensus 963 ~~~~l~~wl~e~~~~L~~~~----------~~~~dl~~v~~ll~k~~~le~e-l~~~~~~l~~L~~~a~~L~~~~p---~ 1028 (2301)
.+.++...|.+.+..+.... +...-++.|+.++-+...+.-+ +..++.++..+....+.+.+.+. .
T Consensus 192 kVA~LE~Rlt~lE~vvg~~~d~~~~lsa~~~~a~vletVe~L~~k~s~l~~~~ld~vEqRL~s~lgK~~~IaEk~~~s~~ 271 (371)
T KOG3958|consen 192 KVAELEKRLTELETVVGCDQDAQNPLSAGLQGACVLETVELLQAKVSALDLAVLDQVEQRLQSVLGKVNEIAEKHKASVE 271 (371)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCchhhccCCchHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 45677778888887775522 1123367778888888877644 66777888888777777765442 1
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHH-H
Q psy18058 1029 --EAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQH-Q 1105 (2301)
Q Consensus 1029 --~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h-~ 1105 (2301)
..+.--..+-++..+|+-+...+-.--.++.....++++...+..+..-|..++..+... +..-..+|.+. .
T Consensus 272 Da~~d~KV~elye~~qrw~pi~stLP~~V~rl~al~~LHeqa~~Fa~~lthl~t~q~~i~~s-----l~~n~ell~~vqt 346 (371)
T KOG3958|consen 272 DADTDSKVHELYETIQRWSPIASTLPELVQRLVALKQLHEQAMQFAQLLTHLDTTQQMIANS-----LKDNTELLTQVQT 346 (371)
T ss_pred cchhhhhHHHHHHHHHhhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcchHHHHHHHH
Confidence 122233345566789999999988877777777777777777777777777777766432 22222233222 3
Q ss_pred HHHHhHHhhHHHHHHHHHh
Q psy18058 1106 AIREEIDNYTEDYKKMMDY 1124 (2301)
Q Consensus 1106 ~l~~ei~~~~~~~~~l~~~ 1124 (2301)
.++..|......|..+...
T Consensus 347 t~~qnl~tV~~k~a~ie~r 365 (371)
T KOG3958|consen 347 TMRQNLATVEGKFASIEER 365 (371)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555555554443
No 177
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=56.54 E-value=9.3 Score=53.15 Aligned_cols=66 Identities=23% Similarity=0.369 Sum_probs=41.2
Q ss_pred HHHHHHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCC------C-CCCchhHHHhhHHHHHHHHHh
Q psy18058 55 KKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP------T-KGKMRIHCLENVDKALQFLRE 123 (2301)
Q Consensus 55 ~~~f~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~------~-~~~~~~~~~~N~~~al~~~~~ 123 (2301)
-..+..|||+ +. .+.++.+ |.||.||++|..++..|-|..+..+ . .+.+-.-++.|+.+.+.-+..
T Consensus 9 ~~~Lv~Wv~t-f~-~~~~~~~-~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 81 (713)
T PF05622_consen 9 CDSLVTWVQT-FN-LSAPCSS-YEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKLLRNIKS 81 (713)
T ss_dssp HHHHHHHHTT-----SS---S-HHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CC-CCCCcCC-HHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3578999999 32 3444544 7999999999999999999876421 1 111223367887777776664
No 178
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=55.68 E-value=4.4e+02 Score=31.73 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhch
Q psy18058 1090 TPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGE 1126 (2301)
Q Consensus 1090 ~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~ 1126 (2301)
...+..++...+.+-+.+..+|..+. |......+.
T Consensus 118 ~~~~~~~l~~~l~ea~~mL~emr~r~--f~~~~~~Ae 152 (264)
T PF06008_consen 118 DQLPSEDLQRALAEAQRMLEEMRKRD--FTPQRQNAE 152 (264)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcc--chhHHHHHH
Confidence 34455667777888888888887773 544444433
No 179
>KOG2128|consensus
Probab=55.50 E-value=39 Score=47.89 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=64.9
Q ss_pred HHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCC--CCCCCchhHHHhhHHHHHHHHHhccccccc-CCccc
Q psy18058 59 QKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPR--PTKGKMRIHCLENVDKALQFLREQRVHLEN-MGSHD 135 (2301)
Q Consensus 59 ~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~--~~~~~~~~~~~~N~~~al~~~~~~~~~l~~-i~~~d 135 (2301)
.+||-.-|...=++-++|.+.||.||.|.+|-+.+.|+..-. |..+.. +..-.|++.-++++...|++-.- -.-.|
T Consensus 48 k~W~e~cl~edL~pttele~~LRNGV~LAkL~~~f~PD~~~~~~~~~~~~-frHtdNi~q~~~~me~iglP~iF~~E~~D 126 (1401)
T KOG2128|consen 48 KRWIEECLGEDLPPTTELEEGLRNGVYLAKLGQFFAPDLEQTIYKANDLH-FRHTDNINQWLRAMESIGLPEIFYPETTD 126 (1401)
T ss_pred HHHHHHHhcccCCCchHHHHHhhhhhHHHHHHhhcCCcceeeeeecCCce-eecchhHHHHHHHHhhcCCCcccccchhh
Confidence 469999998777788999999999999999999999975432 233443 78889999999999998876432 23469
Q ss_pred ccCCcc
Q psy18058 136 IVDGNP 141 (2301)
Q Consensus 136 i~~g~~ 141 (2301)
|.+|.-
T Consensus 127 vy~~kN 132 (1401)
T KOG2128|consen 127 VYEGKN 132 (1401)
T ss_pred hhcCCC
Confidence 999873
No 180
>PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria. There is little literature describing the family.
Probab=55.44 E-value=7.8e+02 Score=34.56 Aligned_cols=148 Identities=13% Similarity=0.178 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH------HHHHH-hhhhhccccCCCChHHHHHHHHHHHHHH
Q psy18058 1677 SQVDKLYAGLKDLAGERRAKLDEALK--LFMLNREVDDLE------QWIAE-REVVAGSHELGQDYDHVTLLWERFKEFD 1747 (2301)
Q Consensus 1677 ~~l~~~~~~L~~~~~~R~~~Le~~~~--~~qf~~e~~~l~------~Wi~~-~e~~~~s~~~g~d~e~v~~l~~k~~~f~ 1747 (2301)
..+..+|..|..-...|-..|+..-. +-.....+..|. .-|.. +-.+-...+. -|+.+++.|.++.+...
T Consensus 1095 eKvr~rYe~LI~~iTKrIt~LEk~k~~~l~~ikK~ia~lnnlqqElklLRnEK~Rmh~~~dk-VDFSDIEkLE~qLq~~~ 1173 (1439)
T PF12252_consen 1095 EKVRVRYETLITDITKRITDLEKAKLDNLDSIKKAIANLNNLQQELKLLRNEKIRMHSGTDK-VDFSDIEKLEKQLQVIH 1173 (1439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHhHHHhhccCCCc-ccHHHHHHHHHHHHHhh
Confidence 56677888888888888777775422 112222222222 22222 2233333333 78999999988877776
Q ss_pred HHHhhhhchHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHHHH
Q psy18058 1748 RDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEK 1827 (2301)
Q Consensus 1748 ~e~~~~~~~rv~~v~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ek 1827 (2301)
.-+- ..-+..+-.....|...-+..-..|+.....++++-+.+..+-.+|-+.=-++.+-.-| .|++.+-+.|+..
T Consensus 1174 ~kL~---dAyl~eitKqIsaLe~e~PKnltdvK~missf~d~laeiE~LrnErIKkHGaSkePLDl-SDlDkLk~~LQ~i 1249 (1439)
T PF12252_consen 1174 TKLY---DAYLVEITKQISALEKEKPKNLTDVKSMISSFNDRLAEIEFLRNERIKKHGASKEPLDL-SDLDKLKGQLQKI 1249 (1439)
T ss_pred hhhH---HHHHHHHHHHHHHHHhhCCCchhhHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCccch-hhHHHHHHHHHHH
Confidence 6552 34444555555566655566666888888888888877777655555554444443333 5555555555554
Q ss_pred hh
Q psy18058 1828 HH 1829 (2301)
Q Consensus 1828 ~~ 1829 (2301)
.+
T Consensus 1250 NQ 1251 (1439)
T PF12252_consen 1250 NQ 1251 (1439)
T ss_pred HH
Confidence 33
No 181
>KOG3543|consensus
Probab=54.76 E-value=5.5 Score=49.68 Aligned_cols=95 Identities=22% Similarity=0.414 Sum_probs=65.2
Q ss_pred eEeEecceeeeccCCccCCCCCCceEEEEEeCcEEE-----EEecCCCCCCCCCccCCCCcceeccCcccccccCC---C
Q psy18058 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLY-----FYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY---S 2228 (2301)
Q Consensus 2157 ~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~-----~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~---~ 2228 (2301)
..|||+.= |+. .++.|+++||||-.-+-| -|..++ ..|...|.|.|-+++..+.. .
T Consensus 466 hsgylyai------g~n-vwkrwkkrffvlvqvsqytfamcsyrekk---------aepqel~qldgytvdytdp~pglq 529 (1218)
T KOG3543|consen 466 HSGYLYAI------GRN-VWKRWKKRFFVLVQVSQYTFAMCSYREKK---------AEPQELIQLDGYTVDYTDPSPGLQ 529 (1218)
T ss_pred cceeehhh------hhH-HHHHhHhhEEEEEEhhhhhhHhhhhhhcc---------cChHHHhhccCeeeccCCCCCccc
Confidence 45777653 232 377899999999854433 344444 13556788888887764432 2
Q ss_pred CCCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHhh
Q psy18058 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268 (2301)
Q Consensus 2229 kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~~ 2268 (2301)
.-+|-|--. ..|.+..|..+++.+..-|++++-.|....
T Consensus 530 gg~~ffnav-kegdtvifasddeqdr~lwvqamyratgqs 568 (1218)
T KOG3543|consen 530 GGKHFFNAV-KEGDTVIFASDDEQDRHLWVQAMYRATGQS 568 (1218)
T ss_pred cchHHHHHh-ccCceEEeccCchhhhhHHHHHHHHhhCCc
Confidence 345666543 357799999999999999999998876643
No 182
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].
Probab=54.32 E-value=3.1e+02 Score=29.54 Aligned_cols=60 Identities=18% Similarity=0.246 Sum_probs=37.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy18058 957 VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEA 1019 (2301)
Q Consensus 957 ~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a 1019 (2301)
......+++.+..-|.+....+.... .....++.+.+++..|+.++.....++.......
T Consensus 44 ~~~lE~eld~~~~~l~~~k~~lee~~---~~~~~~E~l~rriq~LEeele~ae~~L~e~~ekl 103 (143)
T PF12718_consen 44 NQQLEEELDKLEEQLKEAKEKLEESE---KRKSNAEQLNRRIQLLEEELEEAEKKLKETTEKL 103 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHhHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666665554322 2334455788888888888888887776654443
No 183
>KOG4424|consensus
Probab=54.10 E-value=29 Score=44.30 Aligned_cols=86 Identities=12% Similarity=0.230 Sum_probs=62.0
Q ss_pred CCCCceEEEEEe---CcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCC--CCCCceEEEEeCCCCEEEEccCC
Q psy18058 2176 NRSWDKIFVSLR---GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDY--SKKKHVFRVKADNGAEYLFQAKN 2250 (2301)
Q Consensus 2176 ~r~W~~~~~vL~---~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~--~kr~~vf~l~~~~g~~~lfqa~~ 2250 (2301)
...|...|++.- ...++.|..... ......|+|.|+.+.++.+- ..+.|||++.-+- .-|.|.|.+
T Consensus 510 ~~~g~~a~~~vP~~d~~~~~~Yg~~qD--------v~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~-~~~~~~a~~ 580 (623)
T KOG4424|consen 510 GKTGILAWSVVPKSDPLVDYSYGSPQD--------VRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSH-LSWHLAADD 580 (623)
T ss_pred CccceeeeeeccCCCCccccccCCccc--------cccccccccCccccCCCcccccchhcchhhhhhhc-ceeeeccCC
Confidence 467999998765 456666665552 24455788889888865431 1245899887554 489999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q psy18058 2251 DEEMNKWVTALSNVCEQQAS 2270 (2301)
Q Consensus 2251 ~~~~~~W~~~i~~~~~~~~~ 2270 (2301)
+.--..|+..+..|+.....
T Consensus 581 ~q~qq~wl~~l~~A~~~d~~ 600 (623)
T KOG4424|consen 581 EQLQQRWLEVLLLAVSGDLK 600 (623)
T ss_pred HHHHHHHHHHHHhhhccccc
Confidence 99999999999998775433
No 184
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=53.89 E-value=1e+03 Score=35.53 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhcHHHHHHhHHHHHHhh
Q psy18058 1352 ELIGPKISDLGQQFDDLETTTKDKGERLFDS-NREVLIHQTCDDIDSWMNELEKQI 1406 (2301)
Q Consensus 1352 ~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a-~~~~~f~~~~~~l~~WL~~~E~~L 1406 (2301)
..+...+..+......+..........+..+ .....+...+.....++..++...
T Consensus 442 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 497 (1163)
T COG1196 442 EELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAEQ 497 (1163)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444555555555555444444444444 334455556666666666665543
No 185
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=53.12 E-value=75 Score=33.49 Aligned_cols=81 Identities=20% Similarity=0.364 Sum_probs=50.9
Q ss_pred ceEEEEEeCcEEEEEecCCCCC---CCCCccCCCCcceecc--CcccccccCCCCCCceEEEEeCC-CCEEEEccCCHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKSAK---SSPEIYYKNETPFELR--GGSAQVADDYSKKKHVFRVKADN-GAEYLFQAKNDEE 2253 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~~~---~~~~~~~~~~~~i~l~--~a~~~~~~d~~kr~~vf~l~~~~-g~~~lfqa~~~~~ 2253 (2301)
+.+++-|-...+.|-|-..... ..|...++. .|.+. |-+-.+..| +.-|.|.+.+ ...|.+||+|.+.
T Consensus 30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~--~ikls~lglte~v~gd----~~kFeiw~~~~~~~yilqA~t~e~ 103 (133)
T cd01227 30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQ--SLKMTAVGITENVKGD----TKKFEIWYNAREEVYILQAPTPEI 103 (133)
T ss_pred ceeEEEEecceEEEEEEeccCCCCCcceeEEEee--eEEeecccccccCCCC----ccEEEEEeCCCCcEEEEEcCCHHH
Confidence 5788999999999998764221 123333443 23332 222222222 3446565433 3589999999999
Q ss_pred HHHHHHHHHHHHH
Q psy18058 2254 MNKWVTALSNVCE 2266 (2301)
Q Consensus 2254 ~~~W~~~i~~~~~ 2266 (2301)
-..|+..|+...-
T Consensus 104 K~~Wv~~I~~iL~ 116 (133)
T cd01227 104 KAAWVNEIRKVLT 116 (133)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999977654
No 186
>PF14643 DUF4455: Domain of unknown function (DUF4455)
Probab=53.00 E-value=6.8e+02 Score=33.09 Aligned_cols=92 Identities=10% Similarity=0.123 Sum_probs=46.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHh-HHH-HHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHH-HH
Q psy18058 922 NSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHG-VQT-FHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQR-RL 998 (2301)
Q Consensus 922 ~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~~-~~~-f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~-k~ 998 (2301)
+..-+....+.|..-|+.+.+....|+..+..... +.. -...++.+..-|......|.... ...+..|..+.. ..
T Consensus 59 d~~l~~~~~~~l~~~w~~v~~~~~~r~~~I~~l~~~L~~~E~~R~~~l~~~l~~~~~~L~~ia--~~~~~dv~rli~~ea 136 (473)
T PF14643_consen 59 DSALLEYSIQDLLELWDEVAEHSQKRKQWIKELDEDLEELEKERADKLKKVLRKYVEILEKIA--HLLPPDVERLIEKEA 136 (473)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcHHHHHHHHHHH
Confidence 33445666778888999999988888777664321 211 11223444444444444443321 222334444432 23
Q ss_pred HhHHHHHHHHHHHHHHH
Q psy18058 999 SGMERDLAAIQAKLDSL 1015 (2301)
Q Consensus 999 ~~le~el~~~~~~l~~L 1015 (2301)
..+...+-+.+..+..|
T Consensus 137 ~~iN~~ll~Nrra~a~L 153 (473)
T PF14643_consen 137 MEINQALLGNRRAYADL 153 (473)
T ss_pred HHHHHHHHHhHHHHHHH
Confidence 34444454444444443
No 187
>KOG0976|consensus
Probab=52.02 E-value=7.6e+02 Score=33.36 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=40.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy18058 1320 QAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDS 1382 (2301)
Q Consensus 1320 q~~~~El~~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a 1382 (2301)
++++.++..++-.++.++.....++.+-...+.+|...-++|++.-..|.+.-.+-..+|.++
T Consensus 130 ~~~q~d~ke~etelE~~~srlh~le~eLsAk~~eIf~~~~~L~nk~~~lt~~~~q~~tkl~e~ 192 (1265)
T KOG0976|consen 130 QGAQDDKKENEIEIENLNSRLHKLEDELSAKAHDIFMIGEDLHDKNEELNEFNMEFQTKLAEA 192 (1265)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHhHHHHHHHHHHHHH
Confidence 445566677777777777777777766555566676666666666666665555555555544
No 188
>PF14643 DUF4455: Domain of unknown function (DUF4455)
Probab=51.14 E-value=7.2e+02 Score=32.85 Aligned_cols=230 Identities=15% Similarity=0.179 Sum_probs=112.8
Q ss_pred CChHhHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhhhcCCCCCChhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 774 RDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVL---ERLASIEFRYKELLELAKLRKQRLLDALS 850 (2301)
Q Consensus 774 ~d~~~~~~ll~kh~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~v~---~~l~~L~~~~~~L~~~~~~R~~~Le~al~ 850 (2301)
.+|..+...+..+..-+..+.. ..+.-|. ....+.|+......|. ..+..++..|+.....+-.+-..+.+..
T Consensus 201 ~~P~~~~~~~e~~~~~Q~~l~~--~r~~~L~-~l~~l~Pp~~t~~~v~eW~~~l~~l~~~~d~~~~~~~~~lr~~~E~~- 276 (473)
T PF14643_consen 201 QNPPERKQLLEQMRKEQVDLHE--KRLELLQ-SLCDLLPPNLTKEKVEEWYASLNALNEQIDEYHQQCMEKLRALYEKI- 276 (473)
T ss_pred CCChHHHHHHHHHHHHHHHHHH--HHHHHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 6677777777666665555552 3333333 3333444334444454 4445555555555554444444443322
Q ss_pred HHHHHHhHhHHHHHHHHHHHhhcccCCCCChhHHHHHH---------HhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCC
Q psy18058 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMK---------HRYDGFDKEMNANASRVAVVNQLARQLLHVEHP 921 (2301)
Q Consensus 851 l~~~~~e~~~l~~Wl~e~e~~l~~~~~~~~~e~~~~l~---------~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~ 921 (2301)
++++.+-+......|..... .+.+.+..+. .....+..++......++. +...-+.
T Consensus 277 -------~~ec~~~ve~~k~~L~~~~~-~~~eea~~lv~~~~~plv~~~q~~~e~~le~l~~~~E~-------~a~~~~~ 341 (473)
T PF14643_consen 277 -------CQECLALVEKLKQELLDWKA-CTEEEAEELVNPEFLPLVGELQSEFEEELEKLDKSFEE-------LAKQTEA 341 (473)
T ss_pred -------HHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHH
Confidence 12233333333333322222 1222222222 1222222333222222222 2222222
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHh--HHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHH
Q psy18058 922 NSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHG--VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLS 999 (2301)
Q Consensus 922 ~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~~--~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~ 999 (2301)
....+-.-...+...|+.....+......+...+. -..|.........-+......|... .+-+. +..-++
T Consensus 342 ~~~~L~~f~~~~~~lwd~h~~~l~~~e~~l~~~l~~~r~~~~~~~q~~E~~Ld~~~d~lRq~----s~ee~---L~~~l~ 414 (473)
T PF14643_consen 342 QSEDLFKFFQEAAQLWDEHRKKLSKQEEELEKRLEQCREKHDQENQEKEAKLDIALDRLRQA----SSEEK---LKEHLE 414 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhC----CCHHH---HHHHHH
Confidence 33445566677778888887777777777765543 2556666666666666666666441 22333 333444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q psy18058 1000 GMERDLAAIQAKLDSLEAEAVAIEKEHPEE 1029 (2301)
Q Consensus 1000 ~le~el~~~~~~l~~L~~~a~~L~~~~p~~ 1029 (2301)
....-|..++..+.......-.+...+|..
T Consensus 415 ~~~~~Ld~Ie~~Y~~fh~~~~~~~~~yP~~ 444 (473)
T PF14643_consen 415 KALDLLDQIEEEYEDFHKKQTAIVMEYPEM 444 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666667777766666667777754
No 189
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=51.01 E-value=1e+03 Score=34.55 Aligned_cols=99 Identities=23% Similarity=0.377 Sum_probs=50.1
Q ss_pred ChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q psy18058 987 DLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE-AGDLH 1065 (2301)
Q Consensus 987 dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~-a~~~~ 1065 (2301)
...........+..+...+.....++..+......+....-.....+......+......+...+..-...... ....+
T Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~le~~~~~~~~~~ 392 (908)
T COG0419 313 LLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQ 392 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34444555556666666666666666666555555544433444445555555555555555554421111111 22244
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy18058 1066 RFLRDLDHFQVWLTKTQTDV 1085 (2301)
Q Consensus 1066 ~f~~~~~~l~~Wl~~~e~~l 1085 (2301)
........+..++.++...+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~ 412 (908)
T COG0419 393 ELKEELAELSAALEEIQEEL 412 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555444
No 190
>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function.
Probab=50.92 E-value=5.6e+02 Score=31.50 Aligned_cols=125 Identities=18% Similarity=0.308 Sum_probs=65.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q psy18058 990 GIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEH-PEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAG-DLHRF 1067 (2301)
Q Consensus 990 ~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~-p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~-~~~~f 1067 (2301)
.+..+.+++.+++.|+..+..++.........+...+ |.....+-..+..+......|..-+..-....+++. .-..|
T Consensus 87 Ev~~Lrqkl~E~qGD~KlLR~~la~~r~~~~~~~~~~~~~ere~lV~qLEk~~~q~~qLe~d~qs~lDEkeEl~~ERD~y 166 (319)
T PF09789_consen 87 EVEELRQKLNEAQGDIKLLREKLARQRVGDEGIGARHFPHEREDLVEQLEKLREQIEQLERDLQSLLDEKEELVTERDAY 166 (319)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777777777777766655554443332 444555656666666666666555555444444432 33455
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHH
Q psy18058 1068 LRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYK 1119 (2301)
Q Consensus 1068 ~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~ 1119 (2301)
...+..|..=|.-+ +.+.+. .+.++..++.+.+=+++.|...+....
T Consensus 167 k~K~~RLN~ELn~~---L~g~~~--rivDIDaLi~ENRyL~erl~q~qeE~~ 213 (319)
T PF09789_consen 167 KCKAHRLNHELNYI---LNGDEN--RIVDIDALIMENRYLKERLKQLQEEKE 213 (319)
T ss_pred HHHHHHHHHHHHHH---hCCCCC--CcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554444322 233322 222444555555555554444444433
No 191
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [].
Probab=50.71 E-value=5.9e+02 Score=31.74 Aligned_cols=221 Identities=13% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHhHhHHHHHHHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcC--CCCchHHHH
Q psy18058 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVE--HPNSEQIVT 928 (2301)
Q Consensus 851 l~~~~~e~~~l~~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~--~~~~~~I~~ 928 (2301)
+--|...|.++..+|.+-...+...+.-...+...-+..=+..=...-.....++..|...|....... .-...-+..
T Consensus 70 Lely~~~c~EL~~~I~egr~~~~~~E~~~~~~nPpLf~EY~~a~~d~r~~m~~q~~~vK~~aRl~aK~~WYeWR~~ll~g 149 (325)
T PF08317_consen 70 LELYQFSCRELKKYISEGRQIFEEIEEETYESNPPLFREYYTADPDMRLLMDNQFQLVKTYARLEAKKMWYEWRMQLLEG 149 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHhH-HHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHH
Q psy18058 929 RQNQLNHDWAGLREKAEGKRDELNSAHGV-QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAA 1007 (2301)
Q Consensus 929 ~~~~L~~rw~~l~~~~~~r~~~L~~a~~~-~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~ 1007 (2301)
-...|......+..-...-...++....+ .........+..-+........... ..|...+..+..++.....+|.+
T Consensus 150 l~~~L~~~~~~L~~D~~~L~~~~~~l~~~~~~l~~~~~~L~~e~~~Lk~~~~e~~--~~D~~eL~~lr~eL~~~~~~i~~ 227 (325)
T PF08317_consen 150 LKEGLEENLELLQEDYAKLDKQLEQLDELLPKLRERKAELEEELENLKQLVEEIE--SCDQEELEALRQELAEQKEEIEA 227 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hcCHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy18058 1008 IQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDA-KLEEAGDLHRFLRDLDHFQVW 1077 (2301)
Q Consensus 1008 ~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~-~L~~a~~~~~f~~~~~~l~~W 1077 (2301)
.+..+..+...-..+ -.....+..+..++...-..+......++. .-.+...+..=...+..+..|
T Consensus 228 ~k~~l~el~~el~~l----~~~i~~~~~~k~~l~~eI~e~~~~~~~~r~~t~~Ev~~Lk~~~~~Le~~~gw 294 (325)
T PF08317_consen 228 KKKELAELQEELEEL----EEKIEELEEQKQELLAEIAEAEKIREECRGWTRSEVKRLKAKVDALEKLTGW 294 (325)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCc
No 192
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=50.03 E-value=8.8e+02 Score=33.58 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=24.7
Q ss_pred HHhHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy18058 1178 NRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGV 1231 (2301)
Q Consensus 1178 ~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l 1231 (2301)
......++.=|...+..|...+ +.+.+..+..+.+.+...+......+..+
T Consensus 397 ~~~~~~~e~el~~l~~~l~~~~---~~e~i~~l~e~l~~l~~~l~~~~~~~~~~ 447 (650)
T TIGR03185 397 LKELRELEEELAEVDKKISTIP---SEEQIAQLLEELGEAQNELFRSEAEIEEL 447 (650)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555554322 12345555555555555555554444443
No 193
>KOG3958|consensus
Probab=46.99 E-value=5.6e+02 Score=30.36 Aligned_cols=162 Identities=20% Similarity=0.280 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHhhhhhcccc----------C-CCChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHH--HcCCCC
Q psy18058 1709 EVDDLEQWIAEREVVAGSHE----------L-GQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLI--AAGHSD 1775 (2301)
Q Consensus 1709 e~~~l~~Wi~~~e~~~~s~~----------~-g~d~e~v~~l~~k~~~f~~e~~~~~~~rv~~v~~~~~~L~--~~~~~~ 1775 (2301)
.+.+|+.-|.+.|.++.+.. . ..=++.|+.|..|...+....-..-+.|+.++-...+.+- +.+...
T Consensus 192 kVA~LE~Rlt~lE~vvg~~~d~~~~lsa~~~~a~vletVe~L~~k~s~l~~~~ld~vEqRL~s~lgK~~~IaEk~~~s~~ 271 (371)
T KOG3958|consen 192 KVAELEKRLTELETVVGCDQDAQNPLSAGLQGACVLETVELLQAKVSALDLAVLDQVEQRLQSVLGKVNEIAEKHKASVE 271 (371)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCchhhccCCchHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 35566666677666655411 1 2235778888887766654443333456665544444432 122222
Q ss_pred hHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHhHHHHhhhCccccCCCcchHHHHHHHHHHH
Q psy18058 1776 SATIAEWK---DGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNF 1852 (2301)
Q Consensus 1776 ~~~I~~~~---~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~d~~e~l~wi~ek~~~l~~~~g~d~~~v~~l~rkh~~~ 1852 (2301)
.+....+. =++-.+|+-+++.+=.--++|.+-..+|.+......++..|.-+...+...+.. .-..+..-...|
T Consensus 272 Da~~d~KV~elye~~qrw~pi~stLP~~V~rl~al~~LHeqa~~Fa~~lthl~t~q~~i~~sl~~---n~ell~~vqtt~ 348 (371)
T KOG3958|consen 272 DADTDSKVHELYETIQRWSPIASTLPELVQRLVALKQLHEQAMQFAQLLTHLDTTQQMIANSLKD---NTELLTQVQTTM 348 (371)
T ss_pred cchhhhhHHHHHHHHHhhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---chHHHHHHHHHH
Confidence 22333333 346789999999888888888887788888888888888888887777544322 334555666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy18058 1853 LQDLQTLQSQVQQICNESAKL 1873 (2301)
Q Consensus 1853 e~el~~~~~~v~~l~~~a~~L 1873 (2301)
...|......+..+.+....|
T Consensus 349 ~qnl~tV~~k~a~ie~rva~l 369 (371)
T KOG3958|consen 349 RQNLATVEGKFASIEERVAKL 369 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888777766555
No 194
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]
Probab=46.70 E-value=6e+02 Score=30.67 Aligned_cols=25 Identities=28% Similarity=0.299 Sum_probs=14.3
Q ss_pred hhhHHHHhhhhhhHHHHHHHHHHHh
Q psy18058 892 DGFDKEMNANASRVAVVNQLARQLL 916 (2301)
Q Consensus 892 ~~l~~el~~~~~~v~~l~~~a~~L~ 916 (2301)
..+..++..+...-+.+|..+..+.
T Consensus 30 ~El~~~~~~~~ekRdeln~kvrE~~ 54 (294)
T COG1340 30 DELRKEASELAEKRDELNAKVRELR 54 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555556666666666655554
No 195
>PF03915 AIP3: Actin interacting protein 3; InterPro: IPR022782 This entry represents a domain found in yeast actin interacting protein 3 and bud site selection protein 6. In these proteins it is typically found towards the C terminus. It is also found in metazoan proteins, such as the mouse enhancer trap locus 4 protein. ; PDB: 3ONX_B 3OKQ_A.
Probab=45.04 E-value=5.3e+02 Score=33.21 Aligned_cols=105 Identities=25% Similarity=0.377 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHH
Q psy18058 1065 HRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLR 1144 (2301)
Q Consensus 1065 ~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~ 1144 (2301)
......+++|+++++.+...+..-..-.++..++ .+..+|......+..|...-..+.
T Consensus 216 d~Ll~kVdDLQD~VE~LRkDV~~RgvRp~~~qle-------~v~kdi~~a~~~L~~m~~~i~~~k--------------- 273 (424)
T PF03915_consen 216 DRLLTKVDDLQDLVEDLRKDVVQRGVRPSPKQLE-------TVAKDISRASKELKKMKEYIKTEK--------------- 273 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 5667778999999999988876554433333333 334444444444444433322221
Q ss_pred HHHHHHHHhHH-HHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHhhhh
Q psy18058 1145 ERLKALRDGWE-ELHKMWENRQQLLSQSLN-LQMFNRDAKQAEVLLSQQEHVL 1195 (2301)
Q Consensus 1145 ~~l~~L~~~w~-~L~~~~~~R~~~L~~~l~-lq~f~~~~~~~~~wL~~~E~~L 1195 (2301)
-....-|+ +|..-++++ +.|...-. +..+..|++.+...+...+...
T Consensus 274 ---p~WkKiWE~EL~~V~eEQ-qfL~~QedL~~DL~eDl~k~~etf~lveq~~ 322 (424)
T PF03915_consen 274 ---PIWKKIWESELQKVCEEQ-QFLKLQEDLLSDLKEDLKKASETFALVEQCT 322 (424)
T ss_dssp ---HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01222343 233333333 33322222 3346667777777776666554
No 196
>KOG4807|consensus
Probab=44.98 E-value=6.6e+02 Score=30.66 Aligned_cols=241 Identities=17% Similarity=0.216 Sum_probs=115.2
Q ss_pred CChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q psy18058 986 MDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEH-PEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAG-D 1063 (2301)
Q Consensus 986 ~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~-p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~-~ 1063 (2301)
...++...+-.+.++++..|.+.......+...+..+...+ |+... .+. .....+..+... ....+++.. .
T Consensus 288 ~~sD~~~~L~k~vQ~L~AQle~~R~q~e~~q~~~~s~~d~~~~~~~~-~qa---tCERgfAaMEet---HQkkiEdLQRq 360 (593)
T KOG4807|consen 288 PPSDGHEALEKEVQALRAQLEAWRLQGEAPQSALRSQEDGHIPPGYI-SQA---TCERGFAAMEET---HQKKIEDLQRQ 360 (593)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhccCchhhHhhhhhccCCccHH-HHH---HHHhhHHHHHHH---HHHHHHHHHHH
Confidence 34455566666777777777777776666666666665555 32211 111 112222222222 122222211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH-HHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHH
Q psy18058 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQ-AIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142 (2301)
Q Consensus 1064 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~-~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~ 1142 (2301)
.++=+..+++-.+|| -.++...+...++.+-+.|+ ++..|+..-+ .++.-...|-. . .-.+...
T Consensus 361 HqRELekLreEKdrL-------LAEETAATiSAIEAMKnAhrEEmeRELeKsq----SvnsdveaLRr---Q-yleelqs 425 (593)
T KOG4807|consen 361 HQRELEKLREEKDRL-------LAEETAATISAIEAMKNAHREEMERELEKSQ----SVNSDVEALRR---Q-YLEELQS 425 (593)
T ss_pred HHHHHHHHHHHHHhh-------hhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh----ccccChHHHHH---H-HHHHHHH
Confidence 223333444444444 23334445556666666664 3334443322 22222222211 0 0023445
Q ss_pred HHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHH----HHHhhhhccCCCC--------C
Q psy18058 1143 LRERLKALRDGW-------EELHKMWENRQQLLSQSLN-LQMFNRDAKQAEVLL----SQQEHVLSKDETP--------V 1202 (2301)
Q Consensus 1143 l~~~l~~L~~~w-------~~L~~~~~~R~~~L~~~l~-lq~f~~~~~~~~~wL----~~~E~~L~~~~~~--------~ 1202 (2301)
|+..|+-|...| ..|.+..+.+.+.|.+|.. -|.+..--..+..-| +..-.+|..+..| .
T Consensus 426 vqRELeVLSEQYSQKCLEnahLaqalEaerqaLRqCQrEnQELnaHNQELnnRLaaEItrLRtlltgdGgGtGsplaqgk 505 (593)
T KOG4807|consen 426 VQRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGDGGGTGSPLAQGK 505 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHhccCCCCCCCccccCc
Confidence 677777777776 4567778888888888764 344444433443333 3333445443332 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhccCCCchHHHHH
Q psy18058 1203 NLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKK 1251 (2301)
Q Consensus 1203 ~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~ 1251 (2301)
+.-+++.+++-. +.+|.-....|..|...-+.......|++++.++
T Consensus 506 dayELEVLLRVK---EsEiQYLKqEissLkDELQtalrDKkyaSdKYkD 551 (593)
T KOG4807|consen 506 DAYELEVLLRVK---ESEIQYLKQEISSLKDELQTALRDKKYASDKYKD 551 (593)
T ss_pred chhhHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhhhhccccchhH
Confidence 444556555422 2344444445555554444444455566655443
No 197
>KOG2070|consensus
Probab=43.91 E-value=39 Score=41.97 Aligned_cols=78 Identities=14% Similarity=0.288 Sum_probs=60.0
Q ss_pred eEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCceEEEEeCCCCEEEEccCCHHHHHHHHHH
Q psy18058 2181 KIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTA 2260 (2301)
Q Consensus 2181 ~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~ 2260 (2301)
.+|++|-...|.|+.-.+. .+ .+--++-+.+.|..+....|-...+|.|.+.-..-.-.+-.|.++.++..|+.+
T Consensus 327 dRy~~LF~~~llflsvs~r---Ms--~fIyegKlp~tG~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ 401 (661)
T KOG2070|consen 327 DRYLLLFPNVLLFLSVSPR---MS--GFIYEGKLPTTGMIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEH 401 (661)
T ss_pred hheeeeccceeeeeEeccc---cc--hhhhccccccceeEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHH
Confidence 7899999999988875431 11 223455788899999887776677899998755444677889999999999999
Q ss_pred HHH
Q psy18058 2261 LSN 2263 (2301)
Q Consensus 2261 i~~ 2263 (2301)
++.
T Consensus 402 ln~ 404 (661)
T KOG2070|consen 402 LNK 404 (661)
T ss_pred hhh
Confidence 986
No 198
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]
Probab=43.00 E-value=6.8e+02 Score=30.24 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHhH
Q psy18058 1567 TSLIEDLMDRWQQLKKAVDERRSKLIQ-SEKAQQYLFDASEAESWM 1611 (2301)
Q Consensus 1567 ~~~l~~L~~~w~~L~~~~~~R~~~L~~-a~~~qqf~~~~~e~~~Wl 1611 (2301)
...+.+|...-..+...+..-...+.. +.+++.|+..+.++-.=.
T Consensus 157 ~~~~~el~aei~~lk~~~~e~~eki~~la~eaqe~he~m~k~~~~~ 202 (294)
T COG1340 157 NEKLKELKAEIDELKKKAREIHEKIQELANEAQEYHEEMIKLFEEA 202 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555555555544 444566655554443333
No 199
>KOG4302|consensus
Probab=41.94 E-value=1.1e+03 Score=32.22 Aligned_cols=175 Identities=18% Similarity=0.231 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHh
Q psy18058 1032 AIRERIKQIRIIWEQLTQMLKERDAKLEEAGD-LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREE 1110 (2301)
Q Consensus 1032 ~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~-~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~e 1110 (2301)
.....+.+|+.-|+.+...-.+|...|....+ +..|.. .+..-....+ ..++.......++
T Consensus 15 t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~---~kve~a~~~~---------------~~L~~~ia~~eae 76 (660)
T KOG4302|consen 15 TCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYK---RKVEEASESK---------------ARLLQEIAVIEAE 76 (660)
T ss_pred HHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---------------HHHHHHHHHHHHH
Confidence 34556677999999999998888877776432 333222 1111111111 1223333333444
Q ss_pred HHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy18058 1111 IDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQ 1190 (2301)
Q Consensus 1111 i~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~~wL~~ 1190 (2301)
+......+......|.... ....-|.+.+..|...-..|...-.+|...+...+ .....+..-|..
T Consensus 77 l~~l~s~l~~~~~~~~~~~--------k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~------~qie~l~~~l~g 142 (660)
T KOG4302|consen 77 LNDLCSALGEPSIIGEISD--------KIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELY------HQIEKLCEELGG 142 (660)
T ss_pred HHHHHHHhCCccccccccc--------ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHhcC
Confidence 4333222222222222111 11113888888888888888888888877665443 455555555555
Q ss_pred Hhh---hhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Q psy18058 1191 QEH---VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRL 1238 (2301)
Q Consensus 1191 ~E~---~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L 1238 (2301)
.+. ++..++.+-++..++.+..+...++++-...-.+|..+......|
T Consensus 143 ~~~~~~~~~~D~~dlsl~kLeelr~~L~~L~~ek~~Rlekv~~~~~~I~~l 193 (660)
T KOG4302|consen 143 PEDLPSFLIADESDLSLEKLEELREHLNELQKEKSDRLEKVLELKEEIKSL 193 (660)
T ss_pred CccCCcccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 421 223344455667777777777777777666666666555554444
No 200
>PF08429 PLU-1: PLU-1-like protein; InterPro: IPR013637 This domain is found in the central region of lysine-specific demethylases, which are nuclear proteins that may have a role in DNA-binding and transcription, and are associated with malignant cancer phenotypes []. The domain is also found in various other Jumonji/ARID domain-containing proteins (see IPR013129 from INTERPRO, IPR001606 from INTERPRO). ; GO: 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process
Probab=41.54 E-value=8e+02 Score=30.67 Aligned_cols=30 Identities=10% Similarity=0.283 Sum_probs=20.8
Q ss_pred HHHHHHHHhhcccCCCCChhHHHHHHHhhhh
Q psy18058 863 QWIGEKDRMLATMVPGKDIEDVEIMKHRYDG 893 (2301)
Q Consensus 863 ~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~ 893 (2301)
.|.......|. .+...++..+..++..-+.
T Consensus 2 ~W~~k~~~~l~-~~~k~~L~~l~~Ll~e~e~ 31 (335)
T PF08429_consen 2 TWAEKVKEALE-ESPKPSLKELRSLLSEGEK 31 (335)
T ss_pred hhHHHHHHHHh-cCCCCCHHHHHHHHHHHHh
Confidence 68888888886 3344677788777765443
No 201
>PF15411 PH_10: Pleckstrin homology domain
Probab=41.24 E-value=91 Score=32.11 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=56.7
Q ss_pred CCCceEEEEEeCcEEEEEecCCCCCCCCC-----ccCCCCcceeccCcccccc----cCCC-CCCceEEEEe---CCCCE
Q psy18058 2177 RSWDKIFVSLRGTLLYFYKDQKSAKSSPE-----IYYKNETPFELRGGSAQVA----DDYS-KKKHVFRVKA---DNGAE 2243 (2301)
Q Consensus 2177 r~W~~~~~vL~~~~L~~ykd~~~~~~~~~-----~~~~~~~~i~l~~a~~~~~----~d~~-kr~~vf~l~~---~~g~~ 2243 (2301)
.+|+.++|-|-..-|.++|+.+.....+. ......+++.|.|-..... .+-+ --.|+..|.- +.-..
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~~g~~~L~i~w~~d~e~~~ 98 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSKPGSYSLQISWKGDPELEN 98 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCCCCceEEEEEEcCCCCCce
Confidence 67999999999999999998875433211 0124455666666443321 1111 2246777765 34458
Q ss_pred EEEccCCHHHHHHHHHHH
Q psy18058 2244 YLFQAKNDEEMNKWVTAL 2261 (2301)
Q Consensus 2244 ~lfqa~~~~~~~~W~~~i 2261 (2301)
|.+...+++.|..|-.+|
T Consensus 99 F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 99 FTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EEEEeCCHHHHHHHHhhC
Confidence 999999999999998775
No 202
>KOG4673|consensus
Probab=41.12 E-value=1e+03 Score=31.73 Aligned_cols=60 Identities=15% Similarity=0.356 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCCh-------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1529 KKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDS-------AEFTSLIEDLMDRWQQLKKAVDERR 1588 (2301)
Q Consensus 1529 ~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~-------~~I~~~l~~L~~~w~~L~~~~~~R~ 1588 (2301)
.+-+-|..||...+.+++..-.+++.|+..-+... ..++..+..-...|+.+...+.+|.
T Consensus 605 rrEd~~R~Ei~~LqrRlqaaE~R~eel~q~v~~TTrPLlRQIE~lQ~tl~~~~tawereE~~l~~rL 671 (961)
T KOG4673|consen 605 RREDMFRGEIEDLQRRLQAAERRCEELIQQVPETTRPLLRQIEALQETLSKAATAWEREERSLNERL 671 (961)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Confidence 34455777777777788888888888886555432 2334445555567877766666653
No 203
>PHA02562 46 endonuclease subunit; Provisional
Probab=40.81 E-value=1.1e+03 Score=31.98 Aligned_cols=29 Identities=17% Similarity=0.418 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy18058 1140 YMFLRERLKALRDGWEELHKMWENRQQLL 1168 (2301)
Q Consensus 1140 ~~~l~~~l~~L~~~w~~L~~~~~~R~~~L 1168 (2301)
...|.+.+..|+.....+.....+.....
T Consensus 301 ~~~l~d~i~~l~~~l~~l~~~i~~~~~~~ 329 (562)
T PHA02562 301 ITKIKDKLKELQHSLEKLDTAIDELEEIM 329 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666655555555444433
No 204
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=40.47 E-value=9.2e+02 Score=32.19 Aligned_cols=159 Identities=9% Similarity=0.165 Sum_probs=83.8
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh---------cc
Q psy18058 1173 NLQMFNRDAKQAEVLLSQQEHVLS--KDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLN---------DE 1241 (2301)
Q Consensus 1173 ~lq~f~~~~~~~~~wL~~~E~~L~--~~~~~~~l~~~e~~l~k~~~f~~~l~~~~~~v~~l~~~a~~L~---------~~ 1241 (2301)
.+..++..+..+..-|...|..|. ..+++.-..++..+..+-..+...+...+.....|....+.++ ..
T Consensus 15 ~~~~Lh~~i~~cd~~L~~le~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~~i~ipP~lI~~I~~ 94 (508)
T PF04129_consen 15 NFADLHNQIQECDSILESLEEMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFIDDIVIPPDLIRSICE 94 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHhHhc
Confidence 344455555555555555555552 1334444455666666666777777777766667766666663 33
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HH-HHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHH
Q psy18058 1242 DHYAADKVKKKADNINDRRNANKER-AHQQMETLKDQLQL-HQ-FLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTR 1318 (2301)
Q Consensus 1242 ~~~~~~~I~~~l~~l~~rw~~l~~~-~~~r~~~L~~~~~l-q~-f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~k 1318 (2301)
++.+..-+...+.-+. +....... ...-.....+.... .. -...++.+.+||-.+......+. .+...+|..+-+
T Consensus 95 ~~v~e~~~~~~~~~~~-k~~~~~~~~~~~~~~a~~d~~~~Le~L~~ka~~rir~fl~~kI~~lr~~~-tn~q~iQ~~LLk 172 (508)
T PF04129_consen 95 GPVNEQYIEELLELLK-KKIFFSKDQSFKDSKAIKDVKPELEKLKNKAVERIRDFLLKKIKSLRKPK-TNSQIIQQVLLK 172 (508)
T ss_pred CCCCHHHHHHHHHHHH-HHHHHHhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CchHHHHHHHHh
Confidence 5555544443333222 22221111 10011111111111 11 22467788888888876665544 556667777777
Q ss_pred HHHHHHHHHHhHHHH
Q psy18058 1319 HQAFEAEIASNKDRL 1333 (2301)
Q Consensus 1319 hq~~~~El~~~~~~l 1333 (2301)
++.+-.=|..+.+.+
T Consensus 173 ~~~~~~FL~~~~~~~ 187 (508)
T PF04129_consen 173 YKELFQFLKKHSPEL 187 (508)
T ss_pred hHHHHHHHHHhhHHH
Confidence 776666666665543
No 205
>KOG0250|consensus
Probab=40.24 E-value=1.3e+03 Score=32.89 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=54.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy18058 1409 EDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPD---KMEEIVVKKSAVEQRFEKIKEPLLARQRAL 1485 (2301)
Q Consensus 1409 ~~~g~dl~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~~~~~---~~~~i~~~~~~l~~r~~~L~~~~~~R~~~L 1485 (2301)
+....|+..++.+.........+|+.+...++.+..-...+.....+ .-......+.....+++.+.+-+..|...+
T Consensus 727 e~~~~~~~~~~~l~~ei~~~~~eIe~~~~~~e~l~~e~e~~~~e~~e~~~~~~~~~~~l~~e~~~l~~l~~el~~r~dk~ 806 (1074)
T KOG0250|consen 727 EEKQVDISKLEDLAREIKKKEKEIEEKEAPLEKLKEELEHIELEAQELEEYYAAGREKLQGEISKLDALKEELKLREDKL 806 (1074)
T ss_pred hhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45567788888888888888888888887777777666554332221 113445566666667777777777666666
Q ss_pred HHHHHH
Q psy18058 1486 EKKKEA 1491 (2301)
Q Consensus 1486 e~s~~~ 1491 (2301)
......
T Consensus 807 ~s~e~~ 812 (1074)
T KOG0250|consen 807 RSAEDE 812 (1074)
T ss_pred hhhhhh
Confidence 654433
No 206
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in Saccharomyces cerevisiae and higher eukaryotes. In Saccharomyces cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated [].; PDB: 1GO4_F 4DZO_A.
Probab=39.67 E-value=1.3e+02 Score=42.32 Aligned_cols=91 Identities=12% Similarity=0.102 Sum_probs=38.7
Q ss_pred cCCCHHHHHHHH--HHHHHHHHHHhcChhHHHHHHHhHhHhhhcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1517 YGNSLFNVHMLK--KKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDS-AEFTSLIEDLMDRWQQLKKAVDERRSKLIQ 1593 (2301)
Q Consensus 1517 ~g~~l~~vq~l~--~k~q~l~~Ei~~~~~~i~~v~~~g~~Li~~~~~~~-~~I~~~l~~L~~~w~~L~~~~~~R~~~L~~ 1593 (2301)
+..+|...-..+ ..+..|..|.......+..+-..+..-....|... ......+.+|+..-. .+..|..+|..
T Consensus 552 lr~NP~~~~~~~k~~~l~~L~~En~~L~~~l~~le~~~~~~~~~~p~~~~~~~~~e~~~l~~~~~----~~ekr~~RLke 627 (722)
T PF05557_consen 552 LRDNPTSKAEQIKKSTLEALQAENEDLLARLRSLEEGNSQPVDAVPTSSLESQEKEIAELKAELA----SAEKRNQRLKE 627 (722)
T ss_dssp ESS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT----------------HHHHHHHHHHH----HHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccchhhhhhHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 344555444433 34666777766655555433221111111111110 111222333333322 33455666666
Q ss_pred HHH--HHHHHhchHHHHHhH
Q psy18058 1594 SEK--AQQYLFDASEAESWM 1611 (2301)
Q Consensus 1594 a~~--~qqf~~~~~e~~~Wl 1611 (2301)
.+. ...|-..|..+.+|=
T Consensus 628 vf~~ks~eFr~av~~llGyk 647 (722)
T PF05557_consen 628 VFKAKSQEFREAVYSLLGYK 647 (722)
T ss_dssp HHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHHHHHHHHhcce
Confidence 443 467777777777764
No 207
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=39.59 E-value=37 Score=35.22 Aligned_cols=102 Identities=16% Similarity=0.310 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhHhcCCCCc-ccccCCCCccchhhHHHHHhhhCCCCccccccC-ccCHHHHHHHHHHHHHHhcCCcc--c
Q psy18058 173 AKDALLLWCQMKTAGYHNV-NVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS-KSNAIYNLNNAFTVAEDKLGLTK--L 248 (2301)
Q Consensus 173 ~~~~ll~W~~~~~~~~~~~-~v~nf~~~~~dg~~~~~li~~~~p~~~~~~~~~-~~~~~~n~~~a~~~a~~~lgi~~--~ 248 (2301)
..+-...|+-..... .+ +--+|-+.+.||..||.++..-.|.-|.|..-+ +--..+|+..-++.+ +++|+|. +
T Consensus 14 ~~kev~~Wie~~l~~--k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKeSkmpFVQmenIs~Fin~~-~k~~vpe~el 90 (178)
T COG5199 14 QQKEVTLWIETVLGE--KFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKESKMPFVQMENISSFINGL-KKLRVPEYEL 90 (178)
T ss_pred HHHHHHHHHHHHHHh--hhCCcccHHHHHhcchHHHHHHhhcCcccceecccCCceeeHHHHHHHHHHH-HHhCCCHHHH
Confidence 344566788754422 12 224677899999999999999999888776432 334578998888888 6899984 6
Q ss_pred cccccccccCCChhhHHHHHHHHHHHhhhc
Q psy18058 249 LDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278 (2301)
Q Consensus 249 l~~edv~~~~~de~si~~yv~~~~~~~~~~ 278 (2301)
....|+.. .-|..-++.-+..|-.|..++
T Consensus 91 FQT~DLFE-~kd~~qV~~~l~slSRya~K~ 119 (178)
T COG5199 91 FQTNDLFE-AKDLRQVVICLYSLSRYAQKE 119 (178)
T ss_pred HHhhhHHh-hcCHHHHHHHHHHHHHHHHHh
Confidence 66677654 334455554555555555544
No 208
>KOG0532|consensus
Probab=39.25 E-value=14 Score=47.29 Aligned_cols=61 Identities=23% Similarity=0.405 Sum_probs=46.5
Q ss_pred ccCCCCccchhhHHHHHhhhCCCCccc--------cccCccCHHHHHHHHHHHHHHhcCCcc--cccccccc
Q psy18058 194 RNFTTSWRDGLAFNAIIHKHRPDLIQF--------EKLSKSNAIYNLNNAFTVAEDKLGLTK--LLDAEDIF 255 (2301)
Q Consensus 194 ~nf~~~~~dg~~~~~li~~~~p~~~~~--------~~~~~~~~~~n~~~a~~~a~~~lgi~~--~l~~edv~ 255 (2301)
.+|..-..||.++|-|++++||-.+.. .+++......|+..-++.. +++|+|. +-+|.||.
T Consensus 595 ~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaC-RkiGVpEa~lCS~~Dil 665 (722)
T KOG0532|consen 595 EDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEAC-RKIGVPEADLCSPMDIL 665 (722)
T ss_pred hhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHH-HHcCCChHhhcCHHHhh
Confidence 578888999999999999999966532 2333445677777777755 7999984 77788876
No 209
>KOG3551|consensus
Probab=37.93 E-value=28 Score=41.81 Aligned_cols=100 Identities=15% Similarity=0.236 Sum_probs=60.6
Q ss_pred ccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceecc-----CcccccccCCC
Q psy18058 2154 ADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR-----GGSAQVADDYS 2228 (2301)
Q Consensus 2154 ~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~-----~a~~~~~~d~~ 2228 (2301)
.|..-|||..+ +-.|| ...|+..+++|+...|.||-.-.-....- ..|...++|. |+--.....-.
T Consensus 291 evkHiGWLaeq--~~~~G----~~~w~P~l~~lTekelliYes~P~~keaw---s~P~~~ypLvaTRLvhsg~~~~s~~~ 361 (506)
T KOG3551|consen 291 EVKHIGWLAEQ--VSGGG----ISQWKPKLMALTEKELLIYESMPWTKEAW---SRPRHTYPLVATRLVHSGSGKGSVIK 361 (506)
T ss_pred chhhhhhHHhh--ccCCC----hhhhhhheeeechhhhhhhhcChhhHHHh---cChhhhhhhhhhhheecCCCCCCCcC
Confidence 56667999765 22233 36799999999999999997543211111 1122222222 22111111111
Q ss_pred CCCceEEEEeCC--C-CEEEEccCCHHHHHHHHHHHH
Q psy18058 2229 KKKHVFRVKADN--G-AEYLFQAKNDEEMNKWVTALS 2262 (2301)
Q Consensus 2229 kr~~vf~l~~~~--g-~~~lfqa~~~~~~~~W~~~i~ 2262 (2301)
.-.-+|.+||.. | ..|+|..++..+|-.|.+.|-
T Consensus 362 g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslV 398 (506)
T KOG3551|consen 362 GLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLV 398 (506)
T ss_pred CceEEEEEecccccceEEEEEEeccHHHHHHHHHHHH
Confidence 112589998643 3 589999999999999999883
No 210
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=37.57 E-value=1e+02 Score=32.74 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=22.9
Q ss_pred CceEEEEeC--CCCEEEEccCCHHHHHHHHHHHHHH
Q psy18058 2231 KHVFRVKAD--NGAEYLFQAKNDEEMNKWVTALSNV 2264 (2301)
Q Consensus 2231 ~~vf~l~~~--~g~~~lfqa~~~~~~~~W~~~i~~~ 2264 (2301)
.+-|.++.- .|..|-|.|+|......|+++|..+
T Consensus 99 ~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 99 LYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp EEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred ccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 345555432 3556899999999999999999763
No 211
>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy
Probab=37.12 E-value=1e+03 Score=30.70 Aligned_cols=66 Identities=11% Similarity=0.177 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCC--------------CChHHHHHHHHHHHHHHHHhHHH
Q psy18058 1415 LASVNILMQKQQMIETQMAVKAKQVSELETQAEILQK---TVP--------------DKMEEIVVKKSAVEQRFEKIKEP 1477 (2301)
Q Consensus 1415 l~~v~~ll~~~~~le~ei~~~~~~v~~l~~~a~~l~~---~~~--------------~~~~~i~~~~~~l~~r~~~L~~~ 1477 (2301)
.+.+...++....++.+|..+=..+-.--++|..... .++ .|+.++.+-+..|..++..+...
T Consensus 191 ~~~~~~i~~~l~~le~ema~lL~sLt~HfDqC~~a~~~~eg~~~~~~e~~e~l~Vl~~Da~El~~V~~el~~~~~~~~~~ 270 (412)
T PF04108_consen 191 NPLMSTILKELHSLEQEMASLLESLTNHFDQCVTAVRHTEGEPMSEEERQEMLEVLENDAQELPDVVKELQERLDEMENN 270 (412)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHH
Confidence 4566778888888887776655544444444433322 112 14445555556666666555555
Q ss_pred HHH
Q psy18058 1478 LLA 1480 (2301)
Q Consensus 1478 ~~~ 1480 (2301)
...
T Consensus 271 ~~~ 273 (412)
T PF04108_consen 271 EER 273 (412)
T ss_pred HHH
Confidence 444
No 212
>PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A.
Probab=36.72 E-value=8.7e+02 Score=29.67 Aligned_cols=133 Identities=17% Similarity=0.256 Sum_probs=64.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy18058 1144 RERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEA 1223 (2301)
Q Consensus 1144 ~~~l~~L~~~w~~L~~~~~~R~~~L~~~l~lq~f~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l~~ 1223 (2301)
...+..|..-...|..+-.+|...+.+..... =..++..+...+.. ....+--.-....+++|..+...|..
T Consensus 140 ~~~i~~L~~ll~~l~~l~~eR~~~~~~lk~~~-~~d~i~~~l~~~~~-------~~~~~~~~lf~~eL~k~~~~~~~i~~ 211 (296)
T PF13949_consen 140 SEVIRQLRELLNKLEELKKEREELLEQLKEKL-QNDDISKLLSELNK-------NGSADFEALFEEELKKFDPLQNRIQQ 211 (296)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH-------SSS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHhhc-------cCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666667777777888888776555311 12333444433321 00011123346667777776666554
Q ss_pred ----hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy18058 1224 ----NDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEE 1289 (2301)
Q Consensus 1224 ----~~~~v~~l~~~a~~L~~~~~~~~~~I~~~l~~l~~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~e 1289 (2301)
+..-+..|...-..+.... ...........+..++..-.....+-...|.+... ||.++.+
T Consensus 212 ~~~~Q~~ll~~i~~~~~~~~~~~--~~~~~~~~r~~~~~~l~~a~~~y~el~~~l~eG~~---FY~~L~~ 276 (296)
T PF13949_consen 212 NLSKQEELLQEIQEANEEFAQSR--KSDQEQKERESALQRLEAAYDAYKELSSNLEEGLK---FYNDLLE 276 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHH
Confidence 4455555555555554332 11222344444444444444444444444444444 4444433
No 213
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=35.87 E-value=1.1e+03 Score=32.96 Aligned_cols=164 Identities=13% Similarity=0.260 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH--hhhcHHHHHHhHHHHhhhCccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy18058 1798 ETRTQMLVASRELHK--FFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQA 1875 (2301)
Q Consensus 1798 ~~R~~~L~~a~~~~~--f~~d~~e~l~wi~ek~~~l~~~~g~d~~~v~~l~rkh~~~e~el~~~~~~v~~l~~~a~~L~~ 1875 (2301)
.+..+.|-.|.++.+ |.....-+..-|+. .+..|...-+....+|..++.....+.+.|..|..
T Consensus 535 ~E~l~lL~~a~~vlreeYi~~~~~ar~ei~~--------------rv~~Lk~~~e~Ql~~L~~l~e~~~~l~~~ae~Lae 600 (717)
T PF10168_consen 535 QECLELLSQATKVLREEYIEKQDLAREEIQR--------------RVKLLKQQKEQQLKELQELQEERKSLRESAEKLAE 600 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHHhc------cCCCCC
Q psy18058 1876 SYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTG-----DLFKFLIMVRTLMLWMDDVVRQMN------TSEKAR 1944 (2301)
Q Consensus 1876 ~~~~~~a~~i~~~~~~v~~~W~~L~~~~~~R~~~L~~a~-----~~~~f~~~~~dl~~Wl~~~~~~~~------~~e~~~ 1944 (2301)
.| +.+..+++.+..+-+.+...+..+.-.|..|. .+..+...++.|-.+++.+..++. ......
T Consensus 601 R~-----e~a~d~Qe~L~~R~~~vl~~l~~~~P~LS~AEr~~~~EL~~~~~~l~~l~~si~~lk~k~~~Q~~~i~~~~~~ 675 (717)
T PF10168_consen 601 RY-----EEAKDKQEKLMKRVDRVLQLLNSQLPVLSEAEREFKKELERMKDQLQDLKASIEQLKKKLDYQQRQIESQKSP 675 (717)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q psy18058 1945 DVSGVELLMNNHQSLKAEIDTREDNFTACISLGKEL 1980 (2301)
Q Consensus 1945 d~~~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L 1980 (2301)
.-.....-=.+++.++.-+....+.+..++..-+.+
T Consensus 676 ~~~s~~L~~~Q~~~I~~iL~~~~~~I~~~v~~ik~i 711 (717)
T PF10168_consen 676 KKKSIVLSESQKRTIKEILKQQGEEIDELVKQIKNI 711 (717)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 214
>KOG1924|consensus
Probab=35.69 E-value=36 Score=44.73 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy18058 1948 GVELLMNNHQSLKAEIDTREDNFTACISLGK 1978 (2301)
Q Consensus 1948 ~~e~ll~~h~~~~~ei~~~~~~~~~~~~~g~ 1978 (2301)
+.+.++.+...++.|++.-.+-|+-+....+
T Consensus 366 Dl~el~~rledir~emDd~~~~f~lL~n~vk 396 (1102)
T KOG1924|consen 366 DLEELSGRLEDIRAEMDDANEVFELLANTVK 396 (1102)
T ss_pred hHHHHHhHHHhhhhhhccHHHHHHHHHHhhh
Confidence 4455666667777777776666666555543
No 215
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=33.51 E-value=5.4e+02 Score=26.76 Aligned_cols=78 Identities=19% Similarity=0.299 Sum_probs=51.2
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCCChhHHHHHHHHHHHHHHHHH
Q psy18058 446 DNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAE-------------KYHDIDRINARKENVLRLWNYLL 512 (2301)
Q Consensus 446 ~~~g~dl~~v~~~l~kheale~dl~~~~~~v~~l~~~a~~L~~~-------------~~~~~~~i~~r~~~l~~~W~~L~ 512 (2301)
...|.+...|+.+-.....++.++.+.+..+..|...-..+..+ .......+...+.++..+++.++
T Consensus 9 ~~~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~L 88 (120)
T PF12325_consen 9 SSGGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLL 88 (120)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888888888889999999999999987654444221 11233445556666666666666
Q ss_pred HHHHHHHHHHH
Q psy18058 513 ELLKARRMRLE 523 (2301)
Q Consensus 513 ~~~~~R~~~Le 523 (2301)
+++.++....+
T Consensus 89 ellGEK~E~ve 99 (120)
T PF12325_consen 89 ELLGEKSEEVE 99 (120)
T ss_pred HHhcchHHHHH
Confidence 66655554444
No 216
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope. They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....
Probab=33.50 E-value=1e+03 Score=29.42 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=16.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 991 IMTLQRRLSGMERDLAAIQAKLDSLEAEAVAI 1022 (2301)
Q Consensus 991 v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L 1022 (2301)
+..+...+..+..++..++.+...|......+
T Consensus 218 ~~~~r~~~~~l~~el~~l~~~~~~Le~~l~~l 249 (312)
T PF00038_consen 218 LKELRRQIQSLQAELESLRAKNASLERQLREL 249 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHhhhhhhccccchhhhhhhHHHH
Confidence 34444555555555555555555555444444
No 217
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=33.43 E-value=8.9e+02 Score=28.82 Aligned_cols=129 Identities=17% Similarity=0.214 Sum_probs=84.7
Q ss_pred HHHHhhHHHHHHHHHHHHHhhccc--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcChhhH-HHHH
Q psy18058 958 QTFHIECRETVSWIEDKKRILQST--DSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEA-EAIR 1034 (2301)
Q Consensus 958 ~~f~~~~~~l~~wl~e~~~~L~~~--~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~-~~i~ 1034 (2301)
.....+|.++..-+.+....|... ++++.+-..+.-++.+.+.+..++...+.+ ...+...+|... ....
T Consensus 19 ~~l~~eCEe~wk~me~~q~kL~l~~~e~l~~s~~ql~ll~~~~k~L~aE~~qwqk~-------~peii~~n~~VL~~lgk 91 (268)
T PF11802_consen 19 EELIKECEELWKDMEECQNKLSLIGTETLTDSDAQLSLLMMRVKCLTAELEQWQKR-------TPEIIPLNPEVLLTLGK 91 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhc-------CCCcCCCCHHHHHHHHH
Confidence 455677888877788777777553 445544444555555666666665555443 334444444322 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q psy18058 1035 ERIKQIRIIWEQLTQMLKERDAKLEEAGD-LHRFLRDLDHFQVWLTKTQTDVASEDTPSS 1093 (2301)
Q Consensus 1035 ~~l~~L~~~w~~L~~~~~~R~~~L~~a~~-~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~ 1093 (2301)
..++.+....+.+...++.+...|..... -+.++.+..++..-|......+.....+.+
T Consensus 92 eelqkl~~eLe~vLs~~q~KnekLke~LerEq~wL~Eqqql~~sL~~r~~elk~~~~~~s 151 (268)
T PF11802_consen 92 EELQKLISELEMVLSTVQSKNEKLKEDLEREQQWLDEQQQLLESLNKRHEELKNQVETFS 151 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 67788888888888888888888888654 578888888888888777777766544443
No 218
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=32.60 E-value=9.2e+02 Score=28.71 Aligned_cols=103 Identities=14% Similarity=0.176 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy18058 1089 DTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLL 1168 (2301)
Q Consensus 1089 ~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~~L 1168 (2301)
.++.+-+..--++.+-+.+.+|+...+ .....++. ..+..-....++.+..+....+.+......+...|
T Consensus 46 ~l~~s~~ql~ll~~~~k~L~aE~~qwq-------k~~peii~---~n~~VL~~lgkeelqkl~~eLe~vLs~~q~KnekL 115 (268)
T PF11802_consen 46 TLTDSDAQLSLLMMRVKCLTAELEQWQ-------KRTPEIIP---LNPEVLLTLGKEELQKLISELEMVLSTVQSKNEKL 115 (268)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHH-------hcCCCcCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455555566666666554 44445553 22222234567888999999999999999999999
Q ss_pred HHHHHH-HHHHHhHHHHHHHHHHHhhhhccCCCC
Q psy18058 1169 SQSLNL-QMFNRDAKQAEVLLSQQEHVLSKDETP 1201 (2301)
Q Consensus 1169 ~~~l~l-q~f~~~~~~~~~wL~~~E~~L~~~~~~ 1201 (2301)
...+.. +.++.+..++..-|......|.....+
T Consensus 116 ke~LerEq~wL~Eqqql~~sL~~r~~elk~~~~~ 149 (268)
T PF11802_consen 116 KEDLEREQQWLDEQQQLLESLNKRHEELKNQVET 149 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 888764 558888888888888777777544433
No 219
>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]
Probab=32.41 E-value=1.3e+03 Score=30.29 Aligned_cols=132 Identities=13% Similarity=0.258 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1003 RDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQ 1082 (2301)
Q Consensus 1003 ~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~a~~~~~f~~~~~~l~~Wl~~~e 1082 (2301)
.-|..++..++.+......|....... ...+......+..|..-+..+...+.++.. .|...+..+..-+..-.
T Consensus 111 ~~l~~iE~~i~~il~~l~~Lv~sEekN----~~~i~~~~ely~elr~~vl~n~~~~Ge~~~--~lEk~Le~i~~~l~qf~ 184 (570)
T COG4477 111 QQLTLIEEDIEQILEDLNELVESEEKN----SEEIDHVLELYEELRRDVLANRHQYGEAAP--ELEKKLENIEEELSQFV 184 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHhhhhhhhhhH--HHHHHHHHHHHHHHHHH
Confidence 333444444444444444443332221 233555667788887777777777766432 12222222222222221
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHH
Q psy18058 1083 TDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELH 1158 (2301)
Q Consensus 1083 ~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~ 1158 (2301)
.. ...+|+-+|...|...++...-|.+.-+.+-.+....+.- +-.+++.|..+|..+.
T Consensus 185 ~l----t~~Gd~ieA~evl~~~ee~~~~L~~~~e~IP~L~~e~~~~--------------lP~ql~~Lk~Gyr~m~ 242 (570)
T COG4477 185 EL----TSSGDYIEAREVLEEAEEHMIALRSIMERIPSLLAELQTE--------------LPGQLQDLKAGYRDMK 242 (570)
T ss_pred Hh----ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------chHHHHHHHHHHHHHH
Confidence 11 1234555666666555555444444444433333322221 3456667776665543
No 220
>PRK09039 hypothetical protein; Validated
Probab=32.33 E-value=1.1e+03 Score=29.58 Aligned_cols=157 Identities=15% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhcC----CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q psy18058 789 VTEELKNYASTIEALRNQASQLGD----QDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQW 864 (2301)
Q Consensus 789 l~~el~~~~~~i~~L~~~~~~L~~----~~~~~~~v~~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~W 864 (2301)
|..+|......++.+..+...|+. .......++..+..|...|. .+..++..|+....
T Consensus 44 Ls~~i~~~~~eL~~L~~qIa~L~e~L~le~~~~~~l~~~l~~l~~~l~----~a~~~r~~Le~~~~-------------- 105 (343)
T PRK09039 44 LSREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLS----AAEAERSRLQALLA-------------- 105 (343)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH----HHHHHHHHHHHHHh--------------
Q ss_pred HHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH
Q psy18058 865 IGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKA 944 (2301)
Q Consensus 865 l~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~ 944 (2301)
-...........+..+...+...........+.|..++.....|-.. -..+...++....+-...+..+
T Consensus 106 -------~~~~~~~~~~~~~~~l~~~L~~~k~~~se~~~~V~~L~~qI~aLr~Q----la~le~~L~~ae~~~~~~~~~i 174 (343)
T PRK09039 106 -------ELAGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQ----LAALEAALDASEKRDRESQAKI 174 (343)
T ss_pred -------hhhhhcchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHhhhhhH--hHHHHHhhHHHHHHHHHHH
Q psy18058 945 EGKRDELNSAH--GVQTFHIECRETVSWIEDK 974 (2301)
Q Consensus 945 ~~r~~~L~~a~--~~~~f~~~~~~l~~wl~e~ 974 (2301)
...+..|+.++ .+.....=..++..-|.+.
T Consensus 175 ~~L~~~L~~a~~~~~~~l~~~~~~~~~~l~~~ 206 (343)
T PRK09039 175 ADLGRRLNVALAQRVQELNRYRSEFFGRLREI 206 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
No 221
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=31.82 E-value=2.3e+02 Score=29.59 Aligned_cols=88 Identities=9% Similarity=0.075 Sum_probs=48.7
Q ss_pred CCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCccccccc-CCC------CCCceEEEEeCCCCEEEEcc
Q psy18058 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD-DYS------KKKHVFRVKADNGAEYLFQA 2248 (2301)
Q Consensus 2176 ~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~-d~~------kr~~vf~l~~~~g~~~lfqa 2248 (2301)
..+.+.+||-|.....++|-....+.... ........+.|......... .+. .-.++|.|.++ ++..-|-|
T Consensus 27 ~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~-~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~si~i~t~-~R~L~l~a 104 (123)
T PF12814_consen 27 SEKPHRRYFWVDPYTRTLYWSSSNPKSEN-PSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKSIIIVTP-DRSLDLTA 104 (123)
T ss_pred CCCcEEEEEEEeCCCCEEEecCCCCCccc-cccccccceEEeeeEEecCCCCCCccccccccceEEEEEcC-CeEEEEEe
Confidence 45678899989875555443332111110 01111223333322222111 011 12356666666 56999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy18058 2249 KNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2249 ~~~~~~~~W~~~i~~~~ 2265 (2301)
++.++.+-|+.+|+.-+
T Consensus 105 ~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 105 PSRERHEIWFNALRYLL 121 (123)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998765
No 222
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=30.38 E-value=8.3e+02 Score=30.81 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHhhcc
Q psy18058 860 GVQQWIGEKDRMLAT 874 (2301)
Q Consensus 860 ~l~~Wl~e~e~~l~~ 874 (2301)
+...|=.+.|..+..
T Consensus 192 d~~eWklEvERV~Pq 206 (359)
T PF10498_consen 192 DPAEWKLEVERVLPQ 206 (359)
T ss_pred CHHHHHHHHHHHhhh
Confidence 345566666555533
No 223
>TIGR03545 conserved hypothetical protein TIGR03545. This model represents a relatively rare but broadly distributed uncharacterized protein family, distributed in 1-2 percent of bacterial genomes, all of which have outer membranes. In many of these genomes, it is part of a two-gene pair.
Probab=30.27 E-value=1.5e+03 Score=30.52 Aligned_cols=78 Identities=6% Similarity=0.198 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHH
Q psy18058 928 TRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAA 1007 (2301)
Q Consensus 928 ~~~~~L~~rw~~l~~~~~~r~~~L~~a~~~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~ 1007 (2301)
...+++...|......+..+...|.....+..|...++++.. . --.++..+.....+++.+..++.+
T Consensus 164 ~~~~~~~~~~k~~~~~w~~~~~~Lp~~~~~~~yk~~v~~i~~------~-------~ik~p~~i~~~~~e~d~lk~e~~~ 230 (555)
T TIGR03545 164 ETAEEIEKSLKAMQQKWKKRKKDLPNKQDLEEYKKRLEAIKK------K-------DIKNPLELQKIKEEFDKLKKEGKA 230 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHh------c-------cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 445666667777777777777777655556666666555542 0 124677777777888888888877
Q ss_pred HHHHHHHHHHH
Q psy18058 1008 IQAKLDSLEAE 1018 (2301)
Q Consensus 1008 ~~~~l~~L~~~ 1018 (2301)
...++..+...
T Consensus 231 ~~~~i~~~~~~ 241 (555)
T TIGR03545 231 DKQKIKSAKND 241 (555)
T ss_pred HHHHHHHHHHH
Confidence 77777766444
No 224
>KOG0976|consensus
Probab=28.60 E-value=1.7e+03 Score=30.45 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcccCCCCChhHHHHHHHhhhhhHHHHhhh
Q psy18058 822 ERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNAN 901 (2301)
Q Consensus 822 ~~l~~L~~~~~~L~~~~~~R~~~Le~al~l~~~~~e~~~l~~Wl~e~e~~l~~~~~~~~~e~~~~l~~~~~~l~~el~~~ 901 (2301)
.+..++.+.|.....+..+-...++..+.. +...|..+ |.. ...++.-...++.++...
T Consensus 81 ~vstqetriyRrdv~llEddlk~~~sQiri--LQn~c~~l-------E~e------------kq~lQ~ti~~~q~d~ke~ 139 (1265)
T KOG0976|consen 81 KVSTQETRIYRRDVNLLEDDLKHHESQIRI--LQNKCLRL-------EME------------KQKLQDTIQGAQDDKKEN 139 (1265)
T ss_pred hhhHHHHHHHHHHHHHhHHHHHHHHHHHHH--HHHHHHHH-------HHH------------HHHHHHHHHHHHHHHHHH
Confidence 455666777777777776666655543322 11222222 111 222344445555566666
Q ss_pred hhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q psy18058 902 ASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAH 955 (2301)
Q Consensus 902 ~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a~ 955 (2301)
+..++..+..+..|...-.....+|...-+.|.+.-..+...-.+....|..+.
T Consensus 140 etelE~~~srlh~le~eLsAk~~eIf~~~~~L~nk~~~lt~~~~q~~tkl~e~~ 193 (1265)
T KOG0976|consen 140 EIEIENLNSRLHKLEDELSAKAHDIFMIGEDLHDKNEELNEFNMEFQTKLAEAN 193 (1265)
T ss_pred HHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHhHHHHHHHHHHHHHH
Confidence 666666776666666655555666776667776666666666666666665443
No 225
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=28.59 E-value=3.1e+02 Score=27.83 Aligned_cols=37 Identities=22% Similarity=0.544 Sum_probs=32.2
Q ss_pred CCceEEEEeCCCCEEEEccCCHHHHHHHHHHHHHHHHh
Q psy18058 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267 (2301)
Q Consensus 2230 r~~vf~l~~~~g~~~lfqa~~~~~~~~W~~~i~~~~~~ 2267 (2301)
..+-|-|+|+.| ..-|.|.|..+-..|++.|+...+.
T Consensus 69 ~~~yfgL~T~~G-~vEfec~~~~~~k~W~~gI~~mL~~ 105 (110)
T PF08458_consen 69 ERRYFGLKTAQG-VVEFECDSQREYKRWVQGIQHMLSQ 105 (110)
T ss_pred eEEEEEEEecCc-EEEEEeCChhhHHHHHHHHHHHHHH
Confidence 457799999988 7999999999999999999887653
No 226
>cd07662 BAR_SNX6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX6 forms a stable complex with SNX1 and may be a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, acting as a mammalian equivalent of yeast Vsp17p. It interacts with the receptor serine/threonine kinases from the transforming growth factor-beta family. It also plays
Probab=27.28 E-value=1e+03 Score=27.56 Aligned_cols=138 Identities=12% Similarity=0.210 Sum_probs=73.6
Q ss_pred HHhchHHHHHhHHHhhhhhccccCCCCHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHH
Q psy18058 1600 YLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKK-HETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQ 1678 (2301)
Q Consensus 1600 f~~~~~e~~~Wl~e~~~~l~~~~~~~d~~~~~~ll~k-h~~l~~el~~~~~~i~~L~~~~~~L~~~~~~~~~~i~~~~~~ 1678 (2301)
+...+.|...|..+....+.. ....|++ |.....=+..+++.......-|..+...+.+++..+..-+..
T Consensus 14 ~~~~~kd~D~wFe~ek~~l~~---------~~~~Lk~~~~~~e~l~~~rk~la~~~~~~s~sl~~L~~~e~t~L~~~l~~ 84 (218)
T cd07662 14 IVSGVKDVDDFFEHERTFLLE---------YHNRVKDSSAKSDRMTRSHKSAADDYNRIGSSLYTLGTQDSTDICKFFLK 84 (218)
T ss_pred HHhcccchhHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence 335577778888777665532 1222222 222333333333444444444555444445566666655555
Q ss_pred HHHHHHHH---HHHH-HHHHHHHHHHHHHH-H--------HHHHHHHHHHHHHHhhhhhccccCCCChHHHH----HHHH
Q psy18058 1679 VDKLYAGL---KDLA-GERRAKLDEALKLF-M--------LNREVDDLEQWIAEREVVAGSHELGQDYDHVT----LLWE 1741 (2301)
Q Consensus 1679 l~~~~~~L---~~~~-~~R~~~Le~~~~~~-q--------f~~e~~~l~~Wi~~~e~~~~s~~~g~d~e~v~----~l~~ 1741 (2301)
+.+-+..+ .... ..=--.|.+.+..| . |.+-+.-+..|=.-...+...-+.|.|+...+ ...+
T Consensus 85 laev~eki~~l~~~~A~~e~l~L~e~L~~Y~r~~~A~Kdll~rR~r~l~~~enA~k~L~KaR~~~kev~~aE~~~~~a~~ 164 (218)
T cd07662 85 VSELFDKTRKIEARVAADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETTQQLCCQ 164 (218)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 55444433 3332 22234666666666 2 66667777788776666666666788877543 3444
Q ss_pred HHHHH
Q psy18058 1742 RFKEF 1746 (2301)
Q Consensus 1742 k~~~f 1746 (2301)
+|+..
T Consensus 165 ~Fe~I 169 (218)
T cd07662 165 KFEKI 169 (218)
T ss_pred HHHHH
Confidence 55544
No 227
>PF05531 NPV_P10: Nucleopolyhedrovirus P10 protein; InterPro: IPR008702 This family consists of several nucleopolyhedrovirus P10 proteins which are thought to be involved in the morphogenesis of the polyhedra [].; GO: 0019028 viral capsid
Probab=25.86 E-value=5.7e+02 Score=24.12 Aligned_cols=54 Identities=17% Similarity=0.344 Sum_probs=37.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 999 SGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKE 1053 (2301)
Q Consensus 999 ~~le~el~~~~~~l~~L~~~a~~L~~~~p~~~~~i~~~l~~L~~~w~~L~~~~~~ 1053 (2301)
..+..++.+...+++.|......|....|.- ..+..+++.+..+-..|...+..
T Consensus 7 l~Ir~dIk~vd~KVdaLq~~V~~l~~~~~~v-~~l~~klDa~~~~l~~l~~~V~~ 60 (75)
T PF05531_consen 7 LVIRQDIKAVDDKVDALQTQVDDLESNLPDV-TELNKKLDAQSAQLTTLNTKVNE 60 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888888887777777666653 34777777777777666665443
No 228
>PF05218 DUF713: Protein of unknown function (DUF713); InterPro: IPR007883 This family contains proteins of unknown function from Caenorhabditis species.
Probab=25.42 E-value=1e+03 Score=26.88 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHhHH---HHHHHH
Q psy18058 1262 ANKERAHQQMETLKDQLQL-HQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKD---RLLRVQ 1337 (2301)
Q Consensus 1262 ~l~~~~~~r~~~L~~~~~l-q~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~~~---~l~~l~ 1337 (2301)
++.....+|...+-.+..+ ++|-..=++..+||..... .|-....++-.|+.++.-++. ....+.
T Consensus 5 ~~r~E~k~r~~a~~~CI~Lk~rFEekE~eWsdWLk~~R~-----------~I~~~~~~f~~Fe~~~~~~~~~~e~~~~~~ 73 (182)
T PF05218_consen 5 KMRRESKQRFAAFLQCIQLKQRFEEKEQEWSDWLKKLRQ-----------PIVRLKNRFSDFEDEIKFKKTDEEDEEDLQ 73 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHhHHHhhcccchhhhhhHH
Confidence 3455556777778888888 8999999999999984421 233344555666666542111 111122
Q ss_pred HHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1338 QSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGER 1378 (2301)
Q Consensus 1338 ~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~ 1378 (2301)
.++.. ....|....+.|...|..|.......-.+
T Consensus 74 ~E~~~-------l~~~v~~a~~~l~~~f~~L~~L~~~~~D~ 107 (182)
T PF05218_consen 74 SEISN-------LHKSVMSAYNMLENAFENLKKLSEKFPDK 107 (182)
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 22222 23446666677777777777666554433
No 229
>KOG3521|consensus
Probab=24.95 E-value=69 Score=41.58 Aligned_cols=101 Identities=19% Similarity=0.186 Sum_probs=68.5
Q ss_pred ccceEeEecceeeeccCCccCCCCCCceEEEEEeCcEEEEEecCCCCCCCCCccCCCCcceeccCcccccccCCCCCCce
Q psy18058 2154 ADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHV 2233 (2301)
Q Consensus 2154 ~~~~eG~L~rK~~~~~~~k~~~~r~W~~~~~vL~~~~L~~ykd~~~~~~~~~~~~~~~~~i~l~~a~~~~~~d~~kr~~v 2233 (2301)
...+||-|..| .|| -+=-.+||.|--+.|...|..+.. .......+| |+-+..-+|..+.| +|.
T Consensus 426 qLlleGdlrmK-----egk----~sK~DVhcfLfTDllLVcK~v~k~-~drlKVIRp--Pll~dklv~q~~~d----pns 489 (846)
T KOG3521|consen 426 QLLLEGDLRMK-----EGK----GSKADVHCFLFTDLLLVCKKVQKK-ADRLKVIRP--PLLMDKLVCQYLRD----PNS 489 (846)
T ss_pred hhhhccceecc-----cCC----CcccceeeeeehhHHHHhHHHhhh-cccceeecc--chhhcceeeeecCC----CCc
Confidence 34578888777 222 111578999988888888765532 111122233 67777777776666 788
Q ss_pred EEEEeC-----CCCEEEEccCCHHHHHHHHHHHHHHHHhhcC
Q psy18058 2234 FRVKAD-----NGAEYLFQAKNDEEMNKWVTALSNVCEQQAS 2270 (2301)
Q Consensus 2234 f~l~~~-----~g~~~lfqa~~~~~~~~W~~~i~~~~~~~~~ 2270 (2301)
|-|..- ....|.|||...++...|+.+|..|-+.+..
T Consensus 490 f~lVhLtEFh~a~~ayt~hcs~p~d~~~W~D~l~~Aq~~~Qk 531 (846)
T KOG3521|consen 490 FLLVHLTEFHTAQAAYTMHCSGPEDTLRWTDMLKMAQDELQK 531 (846)
T ss_pred eEEEeechhhhhhhhheeecCChhhHHHHHHHHHHHHHHHHH
Confidence 887521 2348999999999999999999988776543
No 230
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=24.82 E-value=8.1e+02 Score=25.54 Aligned_cols=78 Identities=27% Similarity=0.433 Sum_probs=50.1
Q ss_pred CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-------cC------hhhHHHHHHHHHHHHHHHHHHHH
Q psy18058 983 SLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEK-------EH------PEEAEAIRERIKQIRIIWEQLTQ 1049 (2301)
Q Consensus 983 ~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~L~~-------~~------p~~~~~i~~~l~~L~~~w~~L~~ 1049 (2301)
..+.+...++.+...+..++.++...+..+..|...-+.+.. .. ......++..+.+++.+++.+..
T Consensus 10 ~~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~Le 89 (120)
T PF12325_consen 10 SGGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLLE 89 (120)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888888899998888888887555443311 11 12334456666666666666666
Q ss_pred HHHHHHHHHHH
Q psy18058 1050 MLKERDAKLEE 1060 (2301)
Q Consensus 1050 ~~~~R~~~L~~ 1060 (2301)
++.++....++
T Consensus 90 llGEK~E~veE 100 (120)
T PF12325_consen 90 LLGEKSEEVEE 100 (120)
T ss_pred HhcchHHHHHH
Confidence 65555554443
No 231
>KOG0978|consensus
Probab=24.72 E-value=2e+03 Score=30.01 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18058 1030 AEAIRERIKQIRIIWEQLTQMLKERDAK 1057 (2301)
Q Consensus 1030 ~~~i~~~l~~L~~~w~~L~~~~~~R~~~ 1057 (2301)
...+....+.|...|..|+..+..-...
T Consensus 43 ~e~l~~~~~~L~~e~e~Lq~~~~~~~~~ 70 (698)
T KOG0978|consen 43 EEALTVLFDELAEENEKLQNLADHLQEK 70 (698)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345666677777787777776543333
No 232
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament []. The coiled-coil region provides the structural backbone of the thick filament [].; GO: 0003774 motor activity, 0016459 myosin complex; PDB: 2LNK_C 3ZWH_Q.
Probab=24.66 E-value=25 Score=49.77 Aligned_cols=18 Identities=22% Similarity=0.525 Sum_probs=0.0
Q ss_pred cHHHHHHhHHHHHHhhcc
Q psy18058 1391 TCDDIDSWMNELEKQIEN 1408 (2301)
Q Consensus 1391 ~~~~l~~WL~~~E~~L~~ 1408 (2301)
.+..++.-|.++|..|..
T Consensus 744 ~i~kLE~ri~eLE~~Le~ 761 (859)
T PF01576_consen 744 QIAKLEARIRELEEELES 761 (859)
T ss_dssp ------------------
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 445555566666666653
No 233
>TIGR03545 conserved hypothetical protein TIGR03545. This model represents a relatively rare but broadly distributed uncharacterized protein family, distributed in 1-2 percent of bacterial genomes, all of which have outer membranes. In many of these genomes, it is part of a two-gene pair.
Probab=23.99 E-value=1.5e+03 Score=30.42 Aligned_cols=134 Identities=10% Similarity=0.203 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHhhhcccchhhhHhHHHHHHHHHHHHHHHHHhH
Q psy18058 1251 KKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNK 1330 (2301)
Q Consensus 1251 ~~l~~l~~rw~~l~~~~~~r~~~L~~~~~lq~f~~~~~el~~Wl~ek~~~~~~~~~~d~~~l~~~l~khq~~~~El~~~~ 1330 (2301)
...+++...|+.......+|...|...-.+..+.+.++++.. ..+.+|..+.....+.+.+..++.+-+
T Consensus 164 ~~~~~~~~~~k~~~~~w~~~~~~Lp~~~~~~~yk~~v~~i~~-----------~~ik~p~~i~~~~~e~d~lk~e~~~~~ 232 (555)
T TIGR03545 164 ETAEEIEKSLKAMQQKWKKRKKDLPNKQDLEEYKKRLEAIKK-----------KDIKNPLELQKIKEEFDKLKKEGKADK 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHh-----------ccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555666666533334444444444432 245677788888888877778876665
Q ss_pred HHHHHHHHHHhHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----H---------HHHHhcHHHHH
Q psy18058 1331 DRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNR-----E---------VLIHQTCDDID 1396 (2301)
Q Consensus 1331 ~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~r~~~L~~a~~-----~---------~~f~~~~~~l~ 1396 (2301)
..+..+... +....+.+...+.+|...-..-..+|..... . ......++.+.
T Consensus 233 ~~i~~~~~~--------------l~~~~~~~~~~~~~lk~ap~~D~~~L~~~~~~~~~~~~~~~~~L~g~~i~~~~~~~~ 298 (555)
T TIGR03545 233 QKIKSAKND--------------LQNDKKQLKADLAELKKAPQNDLKRLENKYAIKSGDLKNFAVDLFGPEIRKYLQKFL 298 (555)
T ss_pred HHHHHHHHH--------------HHHhHHHHHHHHHHHHhccHhHHHHHHHHhCCCcccHHHHHHHHhhHHHHHHHHHHH
Confidence 555444332 4444455666666666666666666654321 1 12334566777
Q ss_pred HhHHHHHHhhccC
Q psy18058 1397 SWMNELEKQIENE 1409 (2301)
Q Consensus 1397 ~WL~~~E~~L~~~ 1409 (2301)
.|...+++.+...
T Consensus 299 ~~y~~~~p~i~~~ 311 (555)
T TIGR03545 299 KYYDQAEPLLNKS 311 (555)
T ss_pred HHHHHHhHhhccc
Confidence 7888877777643
No 234
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=23.95 E-value=2.1e+03 Score=29.99 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=38.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q psy18058 957 VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVA 1021 (2301)
Q Consensus 957 ~~~f~~~~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~el~~~~~~l~~L~~~a~~ 1021 (2301)
+..+...+..+..-|.+....|...+ +.+.+..+..+++.++.++...+..+..+......
T Consensus 393 ~~~~~~~~~~~e~el~~l~~~l~~~~----~~e~i~~l~e~l~~l~~~l~~~~~~~~~~~~~~~~ 453 (650)
T TIGR03185 393 KSQLLKELRELEEELAEVDKKISTIP----SEEQIAQLLEELGEAQNELFRSEAEIEELLRQLET 453 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666677765422 33566777777777777777777777666555433
No 235
>KOG0165|consensus
Probab=23.48 E-value=11 Score=49.01 Aligned_cols=79 Identities=14% Similarity=0.007 Sum_probs=61.8
Q ss_pred hhHhhhcHHHHHHHHHH-hcCCCCC--CCCCCCchhHHHhhHHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHH
Q psy18058 76 LYVDLRDGKMLLKLLEV-LSGERLP--RPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTII 152 (2301)
Q Consensus 76 l~~dl~dG~~L~~lle~-l~~~~~~--~~~~~~~~~~~~~N~~~al~~~~~~~~~l~~i~~~di~~g~~~~~Lgliw~ii 152 (2301)
|..+++||+.|-.+.|. +.|+.+- .....-.|+-+|-||...|..+-. |+...+|..+-+|.||...|++..|.++
T Consensus 352 ~q~~~~aGl~Lk~~~e~~~~~~~~~~~~R~~a~~r~~kI~~V~l~L~~~~s-gl~T~~~~~~~~Vg~~~~i~~S~~~~~~ 430 (1023)
T KOG0165|consen 352 IQRKWRAGLPLKIAHEHFLMIKRHRAACRIQAHYRGYKIRQVSLRLKSAAS-GLITQKYIRAREVGKHERIKYSEFKKST 430 (1023)
T ss_pred HhHhhhcCcchHHHHHHHHHHHHHHHHhhhHhHHHHhccceeEEEehhhhc-cccHHHHHHHHhhcccccchhHHHHHHH
Confidence 34489999999999985 4444321 111223578899999999999985 9999999999999999999999999877
Q ss_pred hhh
Q psy18058 153 LRF 155 (2301)
Q Consensus 153 ~~~ 155 (2301)
.-.
T Consensus 431 ~~~ 433 (1023)
T KOG0165|consen 431 VIL 433 (1023)
T ss_pred HHH
Confidence 443
No 236
>smart00787 Spc7 Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.
Probab=23.10 E-value=1.5e+03 Score=28.02 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=66.5
Q ss_pred HHHHHhhhhhHHHHhhhhhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HhHHHHHhh
Q psy18058 885 EIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSA-HGVQTFHIE 963 (2301)
Q Consensus 885 ~~l~~~~~~l~~el~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~L~~rw~~l~~~~~~r~~~L~~a-~~~~~f~~~ 963 (2301)
..+..++..+..++.. +.+....+-...+.....++..+..+...-......+.+.+.+|... ..+......
T Consensus 175 ~~l~~~~~~L~~e~~~-------L~~~~~e~~~~d~~eL~~lk~~l~~~~~ei~~~~~~l~e~~~~l~~l~~~I~~~~~~ 247 (312)
T smart00787 175 PKLRDRKDALEEELRQ-------LKQLEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNK 247 (312)
T ss_pred HHHHHHHHHHHHHHHH-------HHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555444 33333333333344455566777777777777777777777777744 456777777
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChHHHHHHHHHHHhHHH
Q psy18058 964 CRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMER 1003 (2301)
Q Consensus 964 ~~~l~~wl~e~~~~L~~~~~~~~dl~~v~~ll~k~~~le~ 1003 (2301)
..++..-|.+.+..+... -|-+...+..+..++..++.
T Consensus 248 k~e~~~~I~~ae~~~~~~--r~~t~~Ei~~Lk~~~~~Le~ 285 (312)
T smart00787 248 KSELNTEIAEAEKKLEQC--RGFTFKEIEKLKEQLKLLQS 285 (312)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Confidence 788888888888776543 35566666666666665543
No 237
>PF04065 Not3: Not1 N-terminal domain, CCR4-Not complex component ; InterPro: IPR007207 The Ccr4-Not complex (Not1, Not2, Not3, Not4 and Not5) is a global regulator of transcription that affects genes positively and negatively and is thought to regulate transcription factor TFIID []. This domain is the N-terminal region of the Not proteins.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=22.61 E-value=4.9e+02 Score=30.51 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=46.3
Q ss_pred HHHHHHHHhHHHHHH-HHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHH
Q psy18058 1145 ERLKALRDGWEELHK-MWENRQQLLSQSL--NLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTM 1221 (2301)
Q Consensus 1145 ~~l~~L~~~w~~L~~-~~~~R~~~L~~~l--~lq~f~~~~~~~~~wL~~~E~~L~~~~~~~~l~~~e~~l~k~~~f~~~l 1221 (2301)
+-+...+.-|..+.. .....+.+|+.-| ++..+++--+++-.|+++.+.. ....+...--.++..+.+|+.++.++
T Consensus 19 EG~~~F~~i~~K~~~~~n~~QKEK~E~DLKkEIKKLQR~RdQIK~W~~~~diK-dk~~L~e~Rk~IE~~MErFK~vEkes 97 (233)
T PF04065_consen 19 EGVEEFDEIYEKVESATNQNQKEKLEADLKKEIKKLQRLRDQIKTWLSSNDIK-DKKKLLENRKLIEEQMERFKVVEKES 97 (233)
T ss_pred HHHHHHHHHHHHHHcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc-cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444444444 2223334454444 2444556668888998755544 22223334445677778888888887
Q ss_pred HhhHHHHHHH
Q psy18058 1222 EANDDKINGV 1231 (2301)
Q Consensus 1222 ~~~~~~v~~l 1231 (2301)
....-.-..|
T Consensus 98 KtKafSkeGL 107 (233)
T PF04065_consen 98 KTKAFSKEGL 107 (233)
T ss_pred cccccchhhh
Confidence 6655444444
No 238
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament []. The coiled-coil region provides the structural backbone of the thick filament [].; GO: 0003774 motor activity, 0016459 myosin complex; PDB: 2LNK_C 3ZWH_Q.
Probab=22.44 E-value=29 Score=49.12 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH
Q psy18058 1464 KSAVEQRFEKIKEPLLARQRALEKK 1488 (2301)
Q Consensus 1464 ~~~l~~r~~~L~~~~~~R~~~Le~s 1488 (2301)
+..+..+...|..-+.+-+..++.+
T Consensus 604 ~~~~e~r~~~l~~elee~~~~~~~a 628 (859)
T PF01576_consen 604 LAVSERRLRALQAELEELREALEQA 628 (859)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555554444444444
No 239
>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]
Probab=21.80 E-value=1.9e+03 Score=28.80 Aligned_cols=162 Identities=13% Similarity=0.131 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhHhhHHHHHHHHhcC-CC-CCChHHHHHHHHHHHHHHHHHH
Q psy18058 611 ERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTG-DI-GHDLTTINLLLSKHKALEDEIQ 688 (2301)
Q Consensus 611 ~~l~~L~~~~~~L~~~~~~R~~~Le~~~~l~qf~~d~~e~~~Wl~e~e~~l~~~-~~-g~dl~~v~~~l~khk~le~el~ 688 (2301)
.-.+.+..-|+-|-.-+.+|+.-.+..-.+-.++..+.+...-|.+--..+... -+ +.+ +...+.|+.+|.
T Consensus 285 ~I~e~ie~lYd~lE~EveA~~~V~~~~~~l~~~l~k~ke~n~~L~~Eie~V~~sY~l~e~e-------~~~vr~~e~eL~ 357 (570)
T COG4477 285 LIQEKIESLYDLLEREVEAKNVVEENLPILPDYLEKAKENNEHLKEEIERVKESYRLAETE-------LGSVRKFEKELK 357 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHhccChhH-------HHHHHHHHHHHH
Confidence 334445556666666666666665555555556666666555555544444321 11 222 234456777777
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhh
Q psy18058 689 AHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDF-HQFFADAVDVDIWMLDTVRLV 767 (2301)
Q Consensus 689 ~~~~~l~~l~~~g~~L~~~~~~~~~~I~~~l~~l~~~w~~L~~~~~~R~~~Le~a~~~-~qf~~~~~el~~Wl~e~~~~l 767 (2301)
.....+..+... +..++-.-..++..++.+...-..+...-..-...|.....- .+-...+..+.+-+.+..+.+
T Consensus 358 el~~~~~~i~~~----~~~~~~~yS~lq~~l~~~~~~l~~i~~~q~~~~e~L~~LrkdEl~Are~l~~~~~~l~eikR~m 433 (570)
T COG4477 358 ELESVLDEILEN----IEAQEVAYSELQDNLEEIEKALTDIEDEQEKVQEHLTSLRKDELEARENLERLKSKLHEIKRYM 433 (570)
T ss_pred HHHHHHHHHHHH----hhcccccHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666543 334555566777777777666666655544444444332211 223344556666677777777
Q ss_pred hccCCCCChHhHHHHH
Q psy18058 768 SSEDVGRDEANVQSLL 783 (2301)
Q Consensus 768 ~~~~~g~d~~~~~~ll 783 (2301)
.....++=|.....+.
T Consensus 434 ek~nLPGlPe~~l~l~ 449 (570)
T COG4477 434 EKSNLPGLPETFLSLF 449 (570)
T ss_pred HHcCCCCCcHHHHHHH
Confidence 7776665555544433
No 240
>PF05769 DUF837: Protein of unknown function (DUF837); InterPro: IPR008555 This family consists of several eukaryotic proteins of unknown function. One of the family members (O02197 from SWISSPROT) is a circulating cathodic antigen (CCA) found in Schistosoma mansoni (Blood fluke) [].
Probab=21.39 E-value=1.2e+03 Score=26.28 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHH
Q psy18058 1098 EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMW 1161 (2301)
Q Consensus 1098 e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~ 1161 (2301)
+..+..++.+..++......+..+...-...+. .++..+...++.+..|...=..|..++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~kI~EM~~vM~~ai~----~de~~~~~~qe~i~qL~~EN~~LRelL 176 (181)
T PF05769_consen 117 EPYLEANEQLSKEVQSQAEKICEMAAVMRKAIE----LDEENSQEEQEIIAQLETENKGLRELL 176 (181)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh----cchhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 334445666777777776666665555444442 123445577888888877766665543
No 241
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]
Probab=20.95 E-value=1.4e+03 Score=26.93 Aligned_cols=120 Identities=14% Similarity=0.224 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhcHHHHHHhHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHH
Q psy18058 1355 GPKISDLGQQFDDLETTTKDKGERLFDS-NREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMA 1433 (2301)
Q Consensus 1355 ~~~l~~L~~~W~~L~~~~~~r~~~L~~a-~~~~~f~~~~~~l~~WL~~~E~~L~~~~~g~dl~~v~~ll~~~~~le~ei~ 1433 (2301)
..-|..+....+.+.....+....+.+. .+.-++...+.++..-+...+..+ ..++|....+.|-.+.+.++..+.
T Consensus 30 ~~~l~k~~~e~e~~~~~~~~~~~e~e~le~qv~~~e~ei~~~r~r~~~~e~kl---~~v~~~~e~~aL~~E~~~ak~r~~ 106 (239)
T COG1579 30 RKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQEIRERIKRAEEKL---SAVKDERELRALNIEIQIAKERIN 106 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHHHH
Confidence 3334444444445555555555555555 445567778888888888888777 334554444444444444444444
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy18058 1434 VKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKK 1488 (2301)
Q Consensus 1434 ~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~r~~~L~~~~~~R~~~Le~s 1488 (2301)
.....+..+...-.. +......+..+..++...+.+-+..++..
T Consensus 107 ~le~el~~l~~~~~~-----------l~~~i~~l~~~~~~~e~~~~e~~~~~e~e 150 (239)
T COG1579 107 SLEDELAELMEEIEK-----------LEKEIEDLKERLERLEKNLAEAEARLEEE 150 (239)
T ss_pred HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444433333322 33344444444444444444444444443
No 242
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=20.95 E-value=1.4e+02 Score=40.33 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=58.1
Q ss_pred HHHHHccccCCCCccchhhHhhhcHHHHHHHHHHhcCCCCCCCC-CCCchhHHHhhHHHHHHHHHhccccc-ccCCcccc
Q psy18058 59 QKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT-KGKMRIHCLENVDKALQFLREQRVHL-ENMGSHDI 136 (2301)
Q Consensus 59 ~~W~n~~l~~~~~~i~dl~~dl~dG~~L~~lle~l~~~~~~~~~-~~~~~~~~~~N~~~al~~~~~~~~~l-~~i~~~di 136 (2301)
..||-..+...-+ -.-+.+.||.||.|.+|..++.|..+.... ..+..+..-.|+|.-|+++...|++= -...-.||
T Consensus 50 K~WIee~~~~~l~-~~~fe~slRnGV~La~l~q~f~pd~~~~iF~~~~LQfrHtdNIN~Fld~i~~vGlPe~FhFEl~Dl 128 (1054)
T COG5261 50 KIWIEEVIEEALP-ELCFEDSLRNGVFLAKLTQRFNPDLTTVIFPADKLQFRHTDNINAFLDLIEHVGLPESFHFELQDL 128 (1054)
T ss_pred HHHHHHHhccCCc-hhhHHHHHhccchHHHHHHHhCCCceeEeeecccceeeccccHHHHHhHhhhcCCcceeeeehHhh
Confidence 3599997754433 334455699999999999999998764321 14667888999999999999887752 12344567
Q ss_pred cCCc
Q psy18058 137 VDGN 140 (2301)
Q Consensus 137 ~~g~ 140 (2301)
.+|.
T Consensus 129 YekK 132 (1054)
T COG5261 129 YEKK 132 (1054)
T ss_pred hccC
Confidence 6654
No 243
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]
Probab=20.54 E-value=1.9e+03 Score=28.20 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHHHHH----HhHHhhHHHHHHHHHhchhhccCCCCCCChhhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy18058 1091 PSSLADAEKLLNQHQAIR----EEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQ 1166 (2301)
Q Consensus 1091 ~~~~~~~e~ll~~h~~l~----~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~l~~~l~~L~~~w~~L~~~~~~R~~ 1166 (2301)
|.+......+..-+..+. ..|+........|......+. .....+...+.....+-..|.....+|+.
T Consensus 139 ~eda~~~~R~ai~~~~l~~~~~~~i~~l~~~~~~l~~~~~~ia--------aeq~~l~~~~~eq~~q~~kl~~~~~E~kk 210 (420)
T COG4942 139 PEDAQRSVRLAIYYGALNPARAERIDALKATLKQLAAVRAEIA--------AEQAELTTLLSEQRAQQAKLAQLLEERKK 210 (420)
T ss_pred hhhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445555554443 444444444444444444443 22334555555666666666666666665
Q ss_pred HHH
Q psy18058 1167 LLS 1169 (2301)
Q Consensus 1167 ~L~ 1169 (2301)
.+.
T Consensus 211 ~~~ 213 (420)
T COG4942 211 TLA 213 (420)
T ss_pred HHH
Confidence 553
No 244
>KOG1264|consensus
Probab=20.50 E-value=1.4e+02 Score=39.89 Aligned_cols=53 Identities=19% Similarity=0.310 Sum_probs=38.8
Q ss_pred ceeccCccccccc-CCCCCCceEEEE--eCCCCEEEEccCCHHHHHHHHHHHHHHH
Q psy18058 2213 PFELRGGSAQVAD-DYSKKKHVFRVK--ADNGAEYLFQAKNDEEMNKWVTALSNVC 2265 (2301)
Q Consensus 2213 ~i~l~~a~~~~~~-d~~kr~~vf~l~--~~~g~~~lfqa~~~~~~~~W~~~i~~~~ 2265 (2301)
..++.-+.+..++ ....+-.||.|. +..-..|+|.|++.+++..|+++|..++
T Consensus 855 i~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t 910 (1267)
T KOG1264|consen 855 ILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREIT 910 (1267)
T ss_pred cccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHH
Confidence 3444444444444 444567999996 4456689999999999999999998765
No 245
>KOG3520|consensus
Probab=20.42 E-value=2.8e+03 Score=30.27 Aligned_cols=86 Identities=19% Similarity=0.288 Sum_probs=53.3
Q ss_pred ceEEEEEeCcEEEEEecCCC-CCCCCCccCCCCcceeccCcccc-cccCCCCCCceEEEEeC-CC-CEEEEccCCHHHHH
Q psy18058 2180 DKIFVSLRGTLLYFYKDQKS-AKSSPEIYYKNETPFELRGGSAQ-VADDYSKKKHVFRVKAD-NG-AEYLFQAKNDEEMN 2255 (2301)
Q Consensus 2180 ~~~~~vL~~~~L~~ykd~~~-~~~~~~~~~~~~~~i~l~~a~~~-~~~d~~kr~~vf~l~~~-~g-~~~lfqa~~~~~~~ 2255 (2301)
+.++++|-.+.|+|+..+.. ....... +-.+.|+|....+. +|.| ++-.|-|.+. +| --|-+.|.+..|.+
T Consensus 637 ~dv~vlLLtD~LvlLqeqD~Kyifksl~--~~spVisL~~livRevAtd---~ka~FlIs~s~~~pqmYEL~a~T~sern 711 (1167)
T KOG3520|consen 637 KDVHVLLLTDILVLLQEKDQKYIFKSLD--KKSPVISLQKLIVREVATD---EKAFFLISMSDQGPEMYELVAQSKSERN 711 (1167)
T ss_pred hhhHHHHHHHHHHHhhhcCceeEeeccc--cCCCceehHHHHHHHHhcc---ccceEEEecCCCCCeeEEEecCCHHHHH
Confidence 45666666666666532211 1111111 12347788765443 3444 4577877766 33 46889999999999
Q ss_pred HHHHHHHHHHHhhcC
Q psy18058 2256 KWVTALSNVCEQQAS 2270 (2301)
Q Consensus 2256 ~W~~~i~~~~~~~~~ 2270 (2301)
.||+.|+.+|+....
T Consensus 712 tW~~li~~~v~s~~~ 726 (1167)
T KOG3520|consen 712 TWIQLIQDAVASCPR 726 (1167)
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999999885443
No 246
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....
Probab=20.40 E-value=1.4e+03 Score=26.84 Aligned_cols=19 Identities=26% Similarity=0.567 Sum_probs=8.0
Q ss_pred HHHhHHHHHHHHHHHHHHH
Q psy18058 997 RLSGMERDLAAIQAKLDSL 1015 (2301)
Q Consensus 997 k~~~le~el~~~~~~l~~L 1015 (2301)
++..++.+|......+..+
T Consensus 142 ki~eLE~el~~~~~~lk~l 160 (237)
T PF00261_consen 142 KIKELEEELKSVGNNLKSL 160 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 3334444444444444443
No 247
>PHA02562 46 endonuclease subunit; Provisional
Probab=20.33 E-value=2.2e+03 Score=28.97 Aligned_cols=19 Identities=21% Similarity=0.125 Sum_probs=7.3
Q ss_pred HHHhHHHHHHHHHHHHHHH
Q psy18058 1150 LRDGWEELHKMWENRQQLL 1168 (2301)
Q Consensus 1150 L~~~w~~L~~~~~~R~~~L 1168 (2301)
+..+...+......+...+
T Consensus 335 ~~~~i~el~~~i~~~~~~i 353 (562)
T PHA02562 335 QSKKLLELKNKISTNKQSL 353 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333433333333333
No 248
>PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences. TBP-1 has been demonstrated to interact with the human immunodeficiency virus type 1 (HIV-1) viral protein Tat, then modulate the essential replication process of HIV. In addition, TBP-1 has been shown to be a component of the 26S proteasome, a basic multiprotein complex that degrades ubiquitinated proteins in an ATP-dependent fashion. Human TBPIP interacts with human TBP-1 then modulates the inhibitory action of human TBP-1 on HIV-Tat-mediated transactivation [].
Probab=20.01 E-value=8.7e+02 Score=26.90 Aligned_cols=89 Identities=16% Similarity=0.358 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHhchhhccCCCCCCChhhHH
Q psy18058 1063 DLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142 (2301)
Q Consensus 1063 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~~~~~ 1142 (2301)
....+...+..+..=+..+...+....-..+.+++...+ ..+..++......+..+...+..+..
T Consensus 80 ei~~L~~el~~l~~~~k~l~~eL~~L~~~~t~~el~~~i---~~l~~e~~~l~~kL~~l~~~~~~vs~------------ 144 (169)
T PF07106_consen 80 EIKELREELAELKKEVKSLEAELASLSSEPTNEELREEI---EELEEEIEELEEKLEKLRSGSKPVSP------------ 144 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHhCCCCCCH------------
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy18058 1143 LRERLKALRDGWEELHKMWENRQQLL 1168 (2301)
Q Consensus 1143 l~~~l~~L~~~w~~L~~~~~~R~~~L 1168 (2301)
+.+..+...|......|..|++..
T Consensus 145 --ee~~~~~~~~~~~~k~w~kRKri~ 168 (169)
T PF07106_consen 145 --EEKEKLEKEYKKWRKEWKKRKRIC 168 (169)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHh
Done!